BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037297
(366 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 162/287 (56%), Gaps = 21/287 (7%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVI 124
+L++ATN+F+ ++G G G VYKG+L DG +A+K+ E +EEF EI
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT----PESSQGIEEFETEIET 88
Query: 125 LSQINHRNVVKLLGCCLE-TEVPLLH-------LHDHHRNEEFP---LTWEIRLRIATEV 173
LS H ++V L+G C E E+ L++ L H + P ++WE RL I
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 174 AGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTF 232
A L YLH+ A I HRD+KS NILLDE + K+ DFG SK +DQTH+ ++GT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKN 292
GY++PEY +LT+KSDVYSFGVVL E+L + I + +E V+LA + V S
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS--LPREMVNLAEWAVESHNNG 263
Query: 293 HMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMEL 339
+ I+D + ++ + F + A +CL L+ + RP+M +V +L
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 161/287 (56%), Gaps = 21/287 (7%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVI 124
+L++ATN+F+ ++G G G VYKG+L DG +A+K+ E +EEF EI
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT----PESSQGIEEFETEIET 88
Query: 125 LSQINHRNVVKLLGCCLE-TEVPLLH-------LHDHHRNEEFP---LTWEIRLRIATEV 173
LS H ++V L+G C E E+ L++ L H + P ++WE RL I
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 174 AGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTF 232
A L YLH+ A I HRD+KS NILLDE + K+ DFG SK + QTH+ ++GT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKN 292
GY++PEY +LT+KSDVYSFGVVL E+L + I + +E V+LA + V S
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS--LPREMVNLAEWAVESHNNG 263
Query: 293 HMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMEL 339
+ I+D + ++ + F + A +CL L+ + RP+M +V +L
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 160 bits (405), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 160/301 (53%), Gaps = 20/301 (6%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK 114
+ + K FS +EL A+++F+ ILG+GG G VYKG L DG ++AVK+ K EE +
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLK-----EERXQ 76
Query: 115 LEE--FINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN------------EEFP 160
E F E+ ++S HRN+++L G C+ T L ++ + N + P
Sbjct: 77 GGELQFQTEVEMISMAVHRNLLRLRGFCM-TPTERLLVYPYMANGSVASCLRERPESQPP 135
Query: 161 LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 220
L W R RIA A L+YLH I HRD+K+ NILLDE + A V DFG +K +
Sbjct: 136 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 195
Query: 221 QTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
HV ++GT G++ PEY + + ++K+DV+ +GV+L+EL+TG++ + ++V
Sbjct: 196 DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 255
Query: 281 LAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELN 340
L + +++ + ++D + K ++ +A C + +RP M EV L
Sbjct: 256 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
Query: 341 G 341
G
Sbjct: 316 G 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 20/301 (6%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK 114
+ + K FS +EL A+++F ILG+GG G VYKG L DG ++AVK+ K EE +
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLK-----EERTQ 68
Query: 115 LEE--FINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN------------EEFP 160
E F E+ ++S HRN+++L G C+ T L ++ + N + P
Sbjct: 69 GGELQFQTEVEMISMAVHRNLLRLRGFCM-TPTERLLVYPYMANGSVASCLRERPESQPP 127
Query: 161 LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 220
L W R RIA A L+YLH I HRD+K+ NILLDE + A V DFG +K +
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187
Query: 221 QTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
HV ++G G++ PEY + + ++K+DV+ +GV+L+EL+TG++ + ++V
Sbjct: 188 DXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 281 LAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELN 340
L + +++ + ++D + K ++ +A C + +RP M EV L
Sbjct: 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
Query: 341 G 341
G
Sbjct: 308 G 308
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 157/307 (51%), Gaps = 36/307 (11%)
Query: 61 FSSKELDKATNHFNVNRI------LGQGGQGTVYKGMLEDGRIMAVKKFKLAVD--DEEL 112
FS EL TN+F+ I +G+GG G VYKG + + + AVKK VD EEL
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEEL 73
Query: 113 LKLEEFINEIVILSQINHRNVVKLLG--------CCLETEVPLLHLHDHHR--NEEFPLT 162
++F EI ++++ H N+V+LLG C + +P L D + PL+
Sbjct: 74 K--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 163 WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG----TSKFIA 218
W +R +IA A +++LH HRDIKS NILLDE + AK++DFG + KF
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA- 187
Query: 219 MDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
QT + ++I GT Y+ PE + ++T KSD+YSFGVVL+E++TG + + +
Sbjct: 188 --QTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG---LPAVDEHREPQ 241
Query: 279 VSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTME 338
+ L + + D +D ++ + A ++A +CL KRP +++V
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 339 LNGIRGS 345
L + S
Sbjct: 301 LQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 156/307 (50%), Gaps = 36/307 (11%)
Query: 61 FSSKELDKATNHFNVNRI------LGQGGQGTVYKGMLEDGRIMAVKKFKLAVD--DEEL 112
FS EL TN+F+ I +G+GG G VYKG + + + AVKK VD EEL
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEEL 73
Query: 113 LKLEEFINEIVILSQINHRNVVKLLG--------CCLETEVPLLHLHDHHR--NEEFPLT 162
++F EI ++++ H N+V+LLG C + +P L D + PL+
Sbjct: 74 K--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 163 WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG----TSKFIA 218
W +R +IA A +++LH HRDIKS NILLDE + AK++DFG + KF
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA- 187
Query: 219 MDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
QT + +I GT Y+ PE + ++T KSD+YSFGVVL+E++TG + + +
Sbjct: 188 --QTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG---LPAVDEHREPQ 241
Query: 279 VSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTME 338
+ L + + D +D ++ + A ++A +CL KRP +++V
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 339 LNGIRGS 345
L + S
Sbjct: 301 LQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 34/306 (11%)
Query: 61 FSSKELDKATNHFNVNRI------LGQGGQGTVYKGMLEDGRIMAVKKFKLAVD-DEELL 113
FS EL TN+F+ I +G+GG G VYKG + + + AVKK VD E L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEEL 67
Query: 114 KLEEFINEIVILSQINHRNVVKLLG--------CCLETEVPLLHLHDHHR--NEEFPLTW 163
K ++F EI ++++ H N+V+LLG C + +P L D + PL+W
Sbjct: 68 K-QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 164 EIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG----TSKFIAM 219
+R +IA A +++LH HRDIKS NILLDE + AK++DFG + KF
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA-- 181
Query: 220 DQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 279
Q + +I GT Y+ PE + ++T KSD+YSFGVVL+E++TG + + + +
Sbjct: 182 -QXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG---LPAVDEHREPQL 236
Query: 280 SLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMEL 339
L + + D +D ++ + A ++A +CL KRP +++V L
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
Query: 340 NGIRGS 345
+ S
Sbjct: 296 QEMTAS 301
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 41/291 (14%)
Query: 69 ATNHFNVNRILGQGGQGTVYKG-MLEDGRIMAVKKFKLAVDDEE---LLKLEEFINEIVI 124
A N + +G+GG G V+KG +++D ++A+K L + E + K +EF E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 125 LSQINHRNVVKLLGCCLETE------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+S +NH N+VKL G VP L+ ++ P+ W ++LR+ ++A +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 179 YLHSAASSPIYHRDIKSTNIL---LDERYR--AKVADFGTSKFIAMDQTHVTTKIQGTFG 233
Y+ + + PI HRD++S NI LDE AKVADFGTS+ H + + G F
Sbjct: 137 YMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQ 191
Query: 234 YLEPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKPI--FSTGNTSQENVSLAAFFVHSM 289
++ PE + T+K+D YSF ++L +LTG+ P +S G F++ +
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---------FINMI 242
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELN 340
R+ + + + ++ N+ E C + KKRP + EL+
Sbjct: 243 REEGLRPTIPEDCPPRLR--------NVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 145/294 (49%), Gaps = 30/294 (10%)
Query: 61 FSSKELDKATNHFNVNRI------LGQGGQGTVYKGMLEDGRIMAVKKFKLAVD--DEEL 112
FS EL TN+F+ I G+GG G VYKG + + + AVKK VD EEL
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEEL 64
Query: 113 LKLEEFINEIVILSQINHRNVVKLLG--------CCLETEVPLLHLHDHHR--NEEFPLT 162
++F EI + ++ H N+V+LLG C + P L D + PL+
Sbjct: 65 K--QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLS 122
Query: 163 WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQ 221
W R +IA A +++LH HRDIKS NILLDE + AK++DFG ++ Q
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 222 THVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 281
++I GT Y PE + ++T KSD+YSFGVVL+E++TG + + + + L
Sbjct: 180 XVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG---LPAVDEHREPQLLL 235
Query: 282 AAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + D +D + + A ++A +CL KRP +++V
Sbjct: 236 DIKEEIEDEEKTIEDYIDKKXND-ADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 41/291 (14%)
Query: 69 ATNHFNVNRILGQGGQGTVYKG-MLEDGRIMAVKKFKLAVDDEE---LLKLEEFINEIVI 124
A N + +G+GG G V+KG +++D ++A+K L + E + K +EF E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 125 LSQINHRNVVKLLGCCLETE------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+S +NH N+VKL G VP L+ ++ P+ W ++LR+ ++A +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 179 YLHSAASSPIYHRDIKSTNIL---LDERYR--AKVADFGTSKFIAMDQTHVTTKIQGTFG 233
Y+ + + PI HRD++S NI LDE AKVADFG S+ H + + G F
Sbjct: 137 YMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQ 191
Query: 234 YLEPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKPI--FSTGNTSQENVSLAAFFVHSM 289
++ PE + T+K+D YSF ++L +LTG+ P +S G F++ +
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---------FINMI 242
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELN 340
R+ + + + ++ N+ E C + KKRP + EL+
Sbjct: 243 REEGLRPTIPEDCPPRLR--------NVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 41/291 (14%)
Query: 69 ATNHFNVNRILGQGGQGTVYKG-MLEDGRIMAVKKFKLAVDDEE---LLKLEEFINEIVI 124
A N + +G+GG G V+KG +++D ++A+K L + E + K +EF E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 125 LSQINHRNVVKLLGCCLETE------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+S +NH N+VKL G VP L+ ++ P+ W ++LR+ ++A +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 179 YLHSAASSPIYHRDIKSTNIL---LDERYR--AKVADFGTSKFIAMDQTHVTTKIQGTFG 233
Y+ + + PI HRD++S NI LDE AKVADF S+ H + + G F
Sbjct: 137 YMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQ 191
Query: 234 YLEPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKPI--FSTGNTSQENVSLAAFFVHSM 289
++ PE + T+K+D YSF ++L +LTG+ P +S G F++ +
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---------FINMI 242
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELN 340
R+ + + + ++ N+ E C + KKRP + EL+
Sbjct: 243 REEGLRPTIPEDCPPRLR--------NVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 120/236 (50%), Gaps = 28/236 (11%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVI 124
++D N+ +G G GTV++ G +AVK L D ++ EF+ E+ I
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKI--LMEQDFHAERVNEFLREVAI 87
Query: 125 LSQINHRNVVKLLGCCLETEVPLLH--------------LHDHHRNEEFPLTWEIRLRIA 170
+ ++ H N+V +G T+ P L LH E+ L RL +A
Sbjct: 88 MKRLRHPNIVLFMGAV--TQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMA 143
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-IQ 229
+VA ++YLH+ + PI HR++KS N+L+D++Y KV DFG S+ A T +++K
Sbjct: 144 YDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAA 200
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFF 285
GT ++ PE + +KSDVYSFGV+L EL T ++P GN + V A F
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW---GNLNPAQVVAAVGF 253
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 116/235 (49%), Gaps = 26/235 (11%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVI 124
++D N+ +G G GTV++ G +AVK L D ++ EF+ E+ I
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKI--LMEQDFHAERVNEFLREVAI 87
Query: 125 LSQINHRNVVKLLGCCLETEVPLLH--------------LHDHHRNEEFPLTWEIRLRIA 170
+ ++ H N+V +G T+ P L LH E+ L RL +A
Sbjct: 88 MKRLRHPNIVLFMGAV--TQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMA 143
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+VA ++YLH+ + PI HRD+KS N+L+D++Y KV DFG S+ A + G
Sbjct: 144 YDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA-SXFLXSKXAAG 201
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFF 285
T ++ PE + +KSDVYSFGV+L EL T ++P GN + V A F
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP---WGNLNPAQVVAAVGF 253
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 34 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 88
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 89 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 148
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYL 235
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + ++
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMY 295
E Q+ + T KSDV+SFGV+L EL+T P + NT V L R+
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-----QGRRLLQP 260
Query: 296 DILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHKMIYST 355
+ D + +++ K C + RP+ E+ ++ I + G ++
Sbjct: 261 EYCPDPLYEVMLK------------CWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 308
Query: 356 GTLLRL 361
T + +
Sbjct: 309 ATYVNV 314
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 31 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 85
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 86 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 145
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYL 235
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + ++
Sbjct: 146 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMY 295
E Q+ + T KSDV+SFGV+L EL+T P + NT V L R+
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-----QGRRLLQP 257
Query: 296 DILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHKMIYST 355
+ D + +++ K C + RP+ E+ ++ I + G ++
Sbjct: 258 EYCPDPLYEVMLK------------CWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 305
Query: 356 GTLLRL 361
T + +
Sbjct: 306 ATYVNV 311
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 87
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYL 235
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + ++
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMY 295
E Q+ + T KSDV+SFGV+L EL+T P + NT V L R+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-----QGRRLLQP 259
Query: 296 DILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHKMIYST 355
+ D + +++ K C + RP+ E+ ++ I + G ++
Sbjct: 260 EYCPDPLYEVMLK------------CWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 307
Query: 356 GTLLRL 361
T + +
Sbjct: 308 ATYVNV 313
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 34 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 88
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 89 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 148
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYL 235
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + ++
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMY 295
E Q+ + T KSDV+SFGV+L EL+T P + NT V L R+
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-----QGRRLLQP 260
Query: 296 DILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHKMIYST 355
+ D + +++ K C + RP+ E+ ++ I + G ++
Sbjct: 261 EYCPDPLYEVMLK------------CWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 308
Query: 356 GTLLRL 361
T + +
Sbjct: 309 ATYVNV 314
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 38 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 92
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 93 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 152
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYL 235
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + ++
Sbjct: 153 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMY 295
E Q+ + T KSDV+SFGV+L EL+T P + NT V L R+
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-----QGRRLLQP 264
Query: 296 DILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHKMIYST 355
+ D + +++ K C + RP+ E+ ++ I + G ++
Sbjct: 265 EYCPDPLYEVMLK------------CWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 312
Query: 356 GTLLRL 361
T + +
Sbjct: 313 ATYVNV 318
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 87
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYL 235
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + ++
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMY 295
E Q+ + T KSDV+SFGV+L EL+T P + NT V L R+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-----QGRRLLQP 259
Query: 296 DILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHKMIYST 355
+ D + +++ K C + RP+ E+ ++ I + G ++
Sbjct: 260 EYCPDPLYEVMLK------------CWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVN 307
Query: 356 GTLLRL 361
T + +
Sbjct: 308 ATYVNV 313
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 92 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 146
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 147 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 206
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYL 235
+L AS HRD+ + N +LDE++ KVADFG ++ + D H T + ++
Sbjct: 207 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 302
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 36/271 (13%)
Query: 75 VNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVV 134
V ++G+G G V K + +A+K+ E + + FI E+ LS++NH N+V
Sbjct: 12 VEEVVGRGAFGVVCKAKWR-AKDVAIKQI------ESESERKAFIVELRQLSRVNHPNIV 64
Query: 135 KLLGCCLETEVPLLHLHDH-------HRNEEFPL-TWEIRLRIATEVAGALSYLHSAASS 186
KL G CL ++ + H E P T + + + ++YLHS
Sbjct: 65 KLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 187 PIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQL 245
+ HRD+K N+LL K+ DFGT+ I QTH+T +G+ ++ PE + S
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGSNY 180
Query: 246 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKL 305
++K DV+S+G++L E++T +KP G AF + M+ + + L
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGP--------AFRI-------MWAVHNGTRPPL 225
Query: 306 VKKNQIMAFANLAERCLDLNGKKRPTMEEVT 336
+ KN +L RC + +RP+MEE+
Sbjct: 226 I-KNLPKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 36/270 (13%)
Query: 75 VNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVV 134
V ++G+G G V K + +A+K+ E + + FI E+ LS++NH N+V
Sbjct: 13 VEEVVGRGAFGVVCKAKWR-AKDVAIKQI------ESESERKAFIVELRQLSRVNHPNIV 65
Query: 135 KLLGCCLETEVPLLHLHDH-------HRNEEFPL-TWEIRLRIATEVAGALSYLHSAASS 186
KL G CL ++ + H E P T + + + ++YLHS
Sbjct: 66 KLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 187 PIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQL 245
+ HRD+K N+LL K+ DFGT+ I QTH+T +G+ ++ PE + S
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGSNY 181
Query: 246 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKL 305
++K DV+S+G++L E++T +KP G AF + M+ + + L
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGP--------AFRI-------MWAVHNGTRPPL 226
Query: 306 VKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ KN +L RC + +RP+MEE+
Sbjct: 227 I-KNLPKPIESLMTRCWSKDPSQRPSMEEI 255
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 32 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 86
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 87 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 146
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFGYL 235
YL AS HRD+ + N +LDE++ KVADFG ++ + H T + ++
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 51 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 105
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 106 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 165
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGYL 235
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + ++
Sbjct: 166 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 222
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 261
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 52 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 106
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 107 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 166
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGYL 235
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + ++
Sbjct: 167 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 262
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 30 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 84
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 85 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 144
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGYL 235
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + ++
Sbjct: 145 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 281
E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 247
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 87
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGYL 235
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + ++
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 87
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 147
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGYL 235
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + ++
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 25 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 79
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 80 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 139
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGYL 235
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + ++
Sbjct: 140 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 196
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 235
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 32 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 86
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 87 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 146
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGYL 235
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + ++
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 203
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 24/226 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 28 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 82
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 83 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 142
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGYL 235
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + ++
Sbjct: 143 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 281
E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 245
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGML--EDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQ 127
HFN ++G+G G VY G L DG+ + AVK D E+ +F+ E +I+
Sbjct: 31 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 85
Query: 128 INHRNVVKLLGCCLETE-VPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALS 178
+H NV+ LLG CL +E PL+ L + RNE T + + +VA +
Sbjct: 86 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 145
Query: 179 YLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGTFGYL 235
YL AS HRD+ + N +LDE++ KVADFG ++ + + H T + ++
Sbjct: 146 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 202
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 241
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 137/295 (46%), Gaps = 43/295 (14%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVI 124
E+D A + I+G GG G VY+ G +AVK + D++ +E E +
Sbjct: 3 EIDFA--ELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 125 LSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFP-------LTWEIRLRIATEVAGAL 177
+ + H N++ L G CL+ E L + + R + +I + A ++A +
Sbjct: 60 FAMLKHPNIIALRGVCLK-EPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGM 118
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYR--------AKVADFGTSKFIAMDQTHVTTKIQ 229
+YLH A PI HRD+KS+NIL+ ++ K+ DFG ++ + H TTK+
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMS 173
Query: 230 --GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
G + ++ PE ++S + SDV+S+GV+L ELLTG+ P + +++A
Sbjct: 174 AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI-----DGLAVA----- 223
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
Y + +++ + FA L E C + + RP+ + +L I
Sbjct: 224 -------YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 38/298 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINE 121
SS + + V + +G G GTVYKG +AVK + + +L+ F NE
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNE 58
Query: 122 IVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIATEVA 174
+ +L + H N++ +G + ++ ++ L+ H E + + IA + A
Sbjct: 59 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 118
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFG 233
+ YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G+
Sbjct: 119 RGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 234 YLEPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMR 290
++ PE S+ + +SDVY+FG+VL EL+TG+ P + N Q + +
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIEMVG 227
Query: 291 KNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPT-------MEEVTMELNG 341
+ + L V+ N L CL +RP+ +EE+ EL+G
Sbjct: 228 RGSLSPDLSK-----VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARELSG 280
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 38/298 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINE 121
SS + + V + +G G GTVYKG +AVK + + +L+ F NE
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNE 70
Query: 122 IVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIATEVA 174
+ +L + H N++ +G + ++ ++ L+ H E + + IA + A
Sbjct: 71 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 130
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFG 233
+ YLH+ + I HRD+KS NI L E K+ DFG ++ +H ++ G+
Sbjct: 131 RGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 234 YLEPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMR 290
++ PE S+ + +SDVY+FG+VL EL+TG+ P + N Q + +
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIEMVG 239
Query: 291 KNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPT-------MEEVTMELNG 341
+ + L V+ N L CL +RP+ +EE+ EL+G
Sbjct: 240 RGSLSPDLSK-----VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARELSG 292
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 23/234 (9%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G G G V+ G + +A+K + E + E+FI E ++ +++H +V+L G
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 139 CCLETEVPLL---------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
CLE + P+ L D+ R + E L + +V ++YL A +
Sbjct: 68 VCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRD+ + N L+ E KV+DFG ++F+ DQ +T + + PE S+ + KS
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 250 DVYSFGVVLVELLT-GKKPIFSTGNTS-QENVSLAAFFVHSMR--KNHMYDILD 299
DV+SFGV++ E+ + GK P + N+ E++S F ++ R H+Y I++
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMN 236
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 23/234 (9%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G G G V+ G + +A+K + E + E+FI E ++ +++H +V+L G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 139 CCLETEVPLL---------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
CLE + P+ L D+ R + E L + +V ++YL A+ +
Sbjct: 70 VCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VI 125
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRD+ + N L+ E KV+DFG ++F+ DQ +T + + PE S+ + KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 250 DVYSFGVVLVELLT-GKKPIFSTGNTS-QENVSLAAFFVHSMR--KNHMYDILD 299
DV+SFGV++ E+ + GK P + N+ E++S F ++ R H+Y I++
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMN 238
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 37/288 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINE 121
SS + + V + +G G GTVYKG +AVK + + +L+ F NE
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNE 56
Query: 122 IVILSQINHRNVVKLLGCCLETEVPL---------LHLHDHHRNEEFPLTWEIRL-RIAT 171
+ +L + H N++ +G + ++ + L+ H H +F + I+L IA
Sbjct: 57 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM---IKLIDIAR 113
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQG 230
+ A + YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G
Sbjct: 114 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 170
Query: 231 TFGYLEPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q +
Sbjct: 171 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIF 222
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + ++ L V+ N A L CL +RP ++
Sbjct: 223 MVGRGYLSPDLSK-----VRSNCPKAMKRLMAECLKKKRDERPLFPQI 265
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 23/234 (9%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G G G V+ G + +A+K + E + E+FI E ++ +++H +V+L G
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 139 CCLETEVPLL---------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
CLE + P+ L D+ R + E L + +V ++YL A +
Sbjct: 73 VCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRD+ + N L+ E KV+DFG ++F+ DQ +T + + PE S+ + KS
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 250 DVYSFGVVLVELLT-GKKPIFSTGNTS-QENVSLAAFFVHSMR--KNHMYDILD 299
DV+SFGV++ E+ + GK P + N+ E++S F ++ R H+Y I++
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMN 241
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 37/288 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINE 121
SS + + V + +G G GTVYKG +AVK + + +L+ F NE
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNE 59
Query: 122 IVILSQINHRNVVKLLGCCLETEVPL---------LHLHDHHRNEEFPLTWEIRL-RIAT 171
+ +L + H N++ +G + ++ + L+ H H +F + I+L IA
Sbjct: 60 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM---IKLIDIAR 116
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQG 230
+ A + YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G
Sbjct: 117 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 231 TFGYLEPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q +
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIF 225
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + ++ L V+ N A L CL +RP ++
Sbjct: 226 MVGRGYLSPDLSK-----VRSNCPKAMKRLMAECLKKKRDERPLFPQI 268
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 37/288 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINE 121
SS + + V + +G G GTVYKG +AVK + + +L+ F NE
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNE 59
Query: 122 IVILSQINHRNVVKLLGCCLETEVPL---------LHLHDHHRNEEFPLTWEIRL-RIAT 171
+ +L + H N++ +G + ++ + L+ H H +F + I+L IA
Sbjct: 60 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM---IKLIDIAR 116
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQG 230
+ A + YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G
Sbjct: 117 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 231 TFGYLEPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q +
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIF 225
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + ++ L V+ N A L CL +RP ++
Sbjct: 226 MVGRGYLSPDLSK-----VRSNCPKAMKRLMAECLKKKRDERPLFPQI 268
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 23/234 (9%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G G G V+ G + +A+K + E + E+FI E ++ +++H +V+L G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 139 CCLETEVPLL---------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
CLE + P+ L D+ R + E L + +V ++YL A +
Sbjct: 70 VCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRD+ + N L+ E KV+DFG ++F+ DQ +T + + PE S+ + KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 250 DVYSFGVVLVELLT-GKKPIFSTGNTS-QENVSLAAFFVHSMR--KNHMYDILD 299
DV+SFGV++ E+ + GK P + N+ E++S F ++ R H+Y I++
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMN 238
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 23/234 (9%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G G G V+ G + +A+K + E + E+FI E ++ +++H +V+L G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 139 CCLETEVPLL---------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
CLE + P+ L D+ R + E L + +V ++YL A +
Sbjct: 71 VCLE-QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRD+ + N L+ E KV+DFG ++F+ DQ +T + + PE S+ + KS
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 250 DVYSFGVVLVELLT-GKKPIFSTGNTS-QENVSLAAFFVHSMR--KNHMYDILD 299
DV+SFGV++ E+ + GK P + N+ E++S F ++ R H+Y I++
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMN 239
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 24/229 (10%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINE 121
SS + + V + +G G GTVYKG +AVK + + +L+ F NE
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNE 82
Query: 122 IVILSQINHRNVVKLLGCCLETEVPL---------LHLHDHHRNEEFPLTWEIRL-RIAT 171
+ +L + H N++ +G + ++ + L+ H H +F + I+L IA
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM---IKLIDIAR 139
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQG 230
+ A + YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G
Sbjct: 140 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 196
Query: 231 TFGYLEPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 24/229 (10%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINE 121
SS + + V + +G G GTVYKG +AVK + + +L+ F NE
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNE 81
Query: 122 IVILSQINHRNVVKLLGCCLETEVPL---------LHLHDHHRNEEFPLTWEIRL-RIAT 171
+ +L + H N++ +G + ++ + L+ H H +F + I+L IA
Sbjct: 82 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM---IKLIDIAR 138
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQG 230
+ A + YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G
Sbjct: 139 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 195
Query: 231 TFGYLEPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E ++ + L +AT+++ A+ YL
Sbjct: 74 GVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEKKN 129
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T + + SQ +Y++L+
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-----------------VYELLEKDYRM 229
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 78 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN 133
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 191 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 233
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 77 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN 132
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 133 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 190 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 232
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 24/229 (10%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINE 121
SS + + V + +G G GTVYKG +AVK + + +L+ F NE
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNE 74
Query: 122 IVILSQINHRNVVKLLGCCLETEVPL---------LHLHDHHRNEEFPLTWEIRL-RIAT 171
+ +L + H N++ +G + ++ + L+ H H +F + I+L IA
Sbjct: 75 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM---IKLIDIAR 131
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQG 230
+ A + YLH+ + I HRD+KS NI L E K+ DFG ++ +H ++ G
Sbjct: 132 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 188
Query: 231 TFGYLEPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
V + +G G GTVYKG +AVK + + +L+ F NE+ +L + H
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRH 79
Query: 131 RNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSA 183
N++ +G ++ ++ L+ H E + + IA + A + YLH+
Sbjct: 80 VNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPE---Y 239
+ I HRD+KS NI L E K+ DFG ++ +H ++ G+ ++ PE
Sbjct: 140 S---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
S+ + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E ++ + L +AT+++ A+ YL
Sbjct: 81 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEKKN 136
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 194 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 236
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E ++ + L +AT+++ A+ YL
Sbjct: 76 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEKKN 131
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 189 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 231
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E ++ + L +AT+++ A+ YL
Sbjct: 76 GVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEKKN 131
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 189 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 231
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E ++ + L +AT+++ A+ YL
Sbjct: 76 GVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEKKN 131
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 189 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 231
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E ++ + L +AT+++ A+ YL
Sbjct: 76 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEKKN 131
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 189 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 231
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 24/229 (10%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINE 121
SS + + V + +G G GTVYKG +AVK + + +L+ F NE
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNE 82
Query: 122 IVILSQINHRNVVKLLGCCLETEVPL---------LHLHDHHRNEEFPLTWEIRL-RIAT 171
+ +L + H N++ +G + ++ + L+ H H +F + I+L IA
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM---IKLIDIAR 139
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQG 230
+ A + YLH+ + I HRD+KS NI L E K+ DFG ++ +H ++ G
Sbjct: 140 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 196
Query: 231 TFGYLEPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 23/234 (9%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G G G V+ G + +A+K K E + ++FI E ++ +++H +V+L G
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-----EGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 139 CCLETEVPLL---------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
CLE + P+ L D+ R + E L + +V ++YL A +
Sbjct: 90 VCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRD+ + N L+ E KV+DFG ++F+ DQ +T + + PE S+ + KS
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 250 DVYSFGVVLVELLT-GKKPIFSTGNTS-QENVSLAAFFVHSMR--KNHMYDILD 299
DV+SFGV++ E+ + GK P + N+ E++S F ++ R H+Y I++
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMN 258
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 81 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN 136
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 193
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 194 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 236
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E ++ + L +AT+++ A+ YL
Sbjct: 74 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEKKN 129
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T + + SQ +Y++L+
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-----------------VYELLEKDYRM 229
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 76 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN 131
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 189 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 231
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 77 GVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN 132
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 133 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 189
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 190 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 232
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 76 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN 131
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 189 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 231
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E ++ + L +AT+++ A+ YL
Sbjct: 74 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEKKN 129
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T + + SQ +Y++L+
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-----------------VYELLEKDYRM 229
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 230 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 81 GVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN 136
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 194 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 236
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 21/201 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 138 GCC-LETE-------VPLLHLHDHHR--NEEFPLTWEIRLRIATEVAGALSYLHSAASSP 187
G C LE +P +L D+ R N E +T + L +AT+++ A+ YL
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNRE-EVTAVVLLYMATQISSAMEYLEKKN--- 150
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+ + N L+ E + KVADFG S+ + D + + PE + +
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI 210
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV++FGV+L E+ T G P
Sbjct: 211 KSDVWAFGVLLWEIATYGMSP 231
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 80 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN 135
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 136 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 192
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 193 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 235
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 236 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 89 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN 144
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 145 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 202 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 244
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 245 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 81 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN 136
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 194 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 236
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 81 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN 136
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 194 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 236
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 78 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN 133
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 191 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 233
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 78 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN 133
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 191 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 233
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 234 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
V + +G G GTVYKG +AVK + + +L+ F NE+ +L + H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRH 63
Query: 131 RNVVKLLGCCLETEVPL---------LHLHDHHRNEEFPLTWEIRL-RIATEVAGALSYL 180
N++ +G + ++ + L+ H H +F + I+L IA + A + YL
Sbjct: 64 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTAQGMDYL 120
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFGYLEPE- 238
H+ + I HRD+KS NI L E K+ DFG + + +H ++ G+ ++ PE
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 239 --YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYD 296
+ + +SDVY+FG+VL EL+TG+ P + N Q + + + ++
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIFMVGRGYLSP 229
Query: 297 ILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
L V+ N A L CL +RP ++
Sbjct: 230 DLSK-----VRSNCPKAMKRLMAECLKKKRDERPLFPQI 263
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
V + +G G GTVYKG +AVK + + +L+ F NE+ +L + H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRH 63
Query: 131 RNVVKLLGCCLETEVPL---------LHLHDHHRNEEFPLTWEIRL-RIATEVAGALSYL 180
N++ +G ++ + L+ H H +F + I+L IA + A + YL
Sbjct: 64 VNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTAQGMDYL 120
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFGYLEPE- 238
H+ + I HRD+KS NI L E K+ DFG + + +H ++ G+ ++ PE
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 239 --YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYD 296
+ + +SDVY+FG+VL EL+TG+ P + N Q + + + ++
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIFMVGRGYLSP 229
Query: 297 ILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
L V+ N A L CL +RP ++
Sbjct: 230 DLSK-----VRSNCPKAMKRLMAECLKKKRDERPLFPQI 263
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
V + +G G GTVYKG +AVK + + +L+ F NE+ +L + H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRH 63
Query: 131 RNVVKLLGCCLETEVPL---------LHLHDHHRNEEFPLTWEIRL-RIATEVAGALSYL 180
N++ +G + ++ + L+ H H +F + I+L IA + A + YL
Sbjct: 64 VNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTAQGMDYL 120
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPE- 238
H+ + I HRD+KS NI L E K+ DFG ++ +H ++ G+ ++ PE
Sbjct: 121 HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 239 --YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYD 296
+ + +SDVY+FG+VL EL+TG+ P + N Q + + + ++
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--------IIFMVGRGYLSP 229
Query: 297 ILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
L V+ N A L CL +RP ++
Sbjct: 230 DLSK-----VRSNCPKAMKRLMAECLKKKRDERPLFPQI 263
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E ++ + L +AT+++ A+ YL
Sbjct: 283 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEKKN 338
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HR++ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 339 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 396 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 438
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 322 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN 377
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HR++ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 378 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 434
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 435 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 477
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 478 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRI-MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VY+G+ + + +AVK K E+ +++EEF+ E ++ +I H N+V+LL
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 138 GCCLETEVP-------------LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
G C E P L +L + +R E + + L +AT+++ A+ YL
Sbjct: 280 GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN 335
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
HR++ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 336 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 392
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV++FGV+L E+ T G + + L+ +Y++L+
Sbjct: 393 FSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLS----------QVYELLEKDYRM 435
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ L C N RP+ E+
Sbjct: 436 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 124/277 (44%), Gaps = 33/277 (11%)
Query: 70 TNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVK--KFKLAVDDEELLKLEEFINEIVILS 126
++ + + ILG GG V+ L D R +AVK + LA D L+ F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR---FRREAQNAA 67
Query: 127 QINHRNVVKL--LGCCLETEVPLLHLHDHHRN---------EEFPLTWEIRLRIATEVAG 175
+NH +V + G PL ++ + + E P+T + + + +
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFG 233
AL++ H I HRD+K NIL+ KV DFG ++ IA V T + GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH------ 287
YL PE + + +SDVYS G VL E+LTG+ P TG++ VS+A V
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSP---VSVAYQHVREDPIPP 239
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDL 324
S R + LD V+K + KN + AE DL
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G G GTVYKG +AVK K+ D + + F NE+ +L + H N++ +G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVV--DPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 139 CCLETEVPL---------LHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
+ + + L+ H H + +F + I IA + A + YLH+ I
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID--IARQTAQGMDYLHAKN---II 154
Query: 190 HRDIKSTNILLDERYRAKVADFG----TSKFIAMDQTHVTTKIQGTFGYLEPE---YHQS 242
HRD+KS NI L E K+ DFG S++ Q T G+ ++ PE +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT---GSVLWMAPEVIRMQDN 211
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+ + +SDVYS+G+VL EL+TG+ P N Q
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 124/281 (44%), Gaps = 41/281 (14%)
Query: 70 TNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVK--KFKLAVDDEELLKLEEFINEIVILS 126
++ + + ILG GG V+ L D R +AVK + LA D L+ F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR---FRREAQNAA 67
Query: 127 QINHRNVVKLLGCCLETEVPL-------------LHLHD--HHRNEEFPLTWEIRLRIAT 171
+NH +V + E E P + L D H E P+T + + +
Sbjct: 68 ALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIA 123
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
+ AL++ H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH-- 287
GT YL PE + + +SDVYS G VL E+LTG+ P TG++ VS+A V
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSP---VSVAYQHVRED 235
Query: 288 ----SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDL 324
S R + LD V+K + KN + AE DL
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 127/264 (48%), Gaps = 31/264 (11%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+GQG GTVY M + G+ +A+++ L ++ K E INEI+++ + + N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 138 GCCL---ETEVPLLHLHDHHRNEEFPLTWEIRLRIAT---EVAGALSYLHSAASSPIYHR 191
L E V + +L + T +IA E AL +LHS + + HR
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHR 140
Query: 192 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDV 251
DIKS NILL K+ DFG I +Q+ +T + GT ++ PE K D+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 252 YSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQI 311
+S G++ +E++ G+ P + EN A + + + N ++ + + + +
Sbjct: 200 WSLGIMAIEMIEGEPPYLN------ENPLRALYLIAT---NGTPELQNPEKLSAI----- 245
Query: 312 MAFANLAERCLDLNGKKRPTMEEV 335
F + RCLD++ +KR + +E+
Sbjct: 246 --FRDFLNRCLDMDVEKRGSAKEL 267
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 100/222 (45%), Gaps = 15/222 (6%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEI----RLRIAT---EVAG 175
I S + H N+++L G + L L R E + ++ R AT E+A
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
ALSY HS + HRDIK N+LL K+ADFG S + + TT + GT YL
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDYL 178
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
PE + +K D++S GV+ E L GK P NT QE
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 218
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 43/272 (15%)
Query: 51 DDSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML--EDGRIMAVKKFKLAVD 108
+D VIDR N + +ILG+G G+V +G L EDG + V + +D
Sbjct: 27 EDVVIDR-------------NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLD 73
Query: 109 DEELLKLEEFINEIVILSQINHRNVVKLLGCCLETE----------VPLLHLHDHH---- 154
+ ++EEF++E + +H NV++LLG C+E +P + D H
Sbjct: 74 NSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL 133
Query: 155 --RNEEFP--LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVAD 210
R E P + + L+ ++A + YL ++ HRD+ + N +L + VAD
Sbjct: 134 YSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVAD 190
Query: 211 FGTSKFIAMDQTHVTTKI-QGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPI 268
FG SK I + +I + ++ E T KSDV++FGV + E+ T G P
Sbjct: 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY 250
Query: 269 FSTGNTSQENVSLAAFFVHSMRKNHMYDILDD 300
+N + + +H R D LD+
Sbjct: 251 -----PGVQNHEMYDYLLHGHRLKQPEDCLDE 277
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 70
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 131 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 237
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 238 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
Query: 347 FG 348
G
Sbjct: 298 AG 299
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H R LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 69
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L ++ + + + L+ +++
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKG 129
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 130 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 236
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
Query: 347 FG 348
G
Sbjct: 297 AG 298
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 113/284 (39%), Gaps = 49/284 (17%)
Query: 67 DKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVIL 125
D F+ R +G G G VY + + ++A+KK + + K ++ I E+ L
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS-GKQSNEKWQDIIKEVRFL 69
Query: 126 SQINHRNVVKLLGC-------------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATE 172
++ H N ++ GC CL + LL +H E + IA
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE---------VEIAAV 120
Query: 173 VAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
GAL L S + HRD+K+ NILL E K+ DFG++ +A V GT
Sbjct: 121 THGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTP 175
Query: 233 GYLEPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
++ PE Q K DV+S G+ +EL K P+F+ S
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------------- 222
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTME 333
+Y I ++ L + F N + CL + RPT E
Sbjct: 223 ----LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 262
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 84
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 251
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 252 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
Query: 347 FG 348
G
Sbjct: 312 AG 313
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 66
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 233
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 234 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
Query: 347 FG 348
G
Sbjct: 294 AG 295
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 66
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 233
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 234 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
Query: 347 FG 348
G
Sbjct: 294 AG 295
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 69
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 130 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 236
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
Query: 347 FG 348
G
Sbjct: 297 AG 298
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 66
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 127 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 233
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 234 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
Query: 347 FG 348
G
Sbjct: 294 AG 295
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 116/287 (40%), Gaps = 55/287 (19%)
Query: 67 DKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVIL 125
D F+ R +G G G VY + + ++A+KK + + K ++ I E+ L
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS-GKQSNEKWQDIIKEVRFL 108
Query: 126 SQINHRNVVKLLGC-------------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATE 172
++ H N ++ GC CL + LL +H E + IA
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE---------VEIAAV 159
Query: 173 VAGAL---SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
GAL +YLHS + HRD+K+ NILL E K+ DFG++ +A V
Sbjct: 160 THGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV----- 211
Query: 230 GTFGYLEPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFV 286
GT ++ PE Q K DV+S G+ +EL K P+F+ S
Sbjct: 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---------- 261
Query: 287 HSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTME 333
+Y I ++ L + F N + CL + RPT E
Sbjct: 262 -------LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 301
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 71
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 132 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 238
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 239 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
Query: 347 FG 348
G
Sbjct: 299 AG 300
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 35/288 (12%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAV-----DDEELLKLEEFINEIVILSQINHRNV 133
LG GG TVY L + I+ +K A+ + EE LK F E+ SQ++H+N+
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLK--RFEREVHNSSQLSHQNI 73
Query: 134 VKLLGCCLETEVPLLHLH-------DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
V ++ E + L + + PL+ + + ++ + + H
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR-- 131
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLT 246
I HRDIK NIL+D K+ DFG +K ++ T + GT Y PE +
Sbjct: 132 -IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 247 DKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLV 306
+ +D+YS G+VL E+L G+ P G T+ VS+A + N D V
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPF--NGETA---VSIAIKHIQDSVPNVTTD---------V 236
Query: 307 KKNQIMAFANLAERCLDLNGKKR-PTMEEVTMELNGIRGSNFGHKMIY 353
+K+ + +N+ R + + R T++E+ +L+ + N ++ +Y
Sbjct: 237 RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVY 284
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 73
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 134 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 240
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 241 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
Query: 347 FG 348
G
Sbjct: 301 AG 302
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 72
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 133 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 239
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 240 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
Query: 347 FG 348
G
Sbjct: 300 AG 301
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 134/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 64
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 125 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 231
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR
Sbjct: 232 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
Query: 347 FG 348
G
Sbjct: 292 AG 293
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 42/297 (14%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 84
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 145 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 251
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIR 343
++ +++L+K N + + + C + N +RP+ ++ + ++ IR
Sbjct: 252 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 70 TNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVK--KFKLAVDDEELLKLEEFINEIVILS 126
++ + + ILG GG V+ L D R +AVK + LA D L+ F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR---FRREAQNAA 67
Query: 127 QINHRNVVKL--LGCCLETEVPLLHLHDHHRN---------EEFPLTWEIRLRIATEVAG 175
+NH +V + G PL ++ + + E P+T + + + +
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQGTFG 233
AL++ H I HRD+K NI++ KV DFG ++ IA VT + GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAF----FVHSM 289
YL PE + + +SDVYS G VL E+LTG+ P TG+ S ++V+ S
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGD-SPDSVAYQHVREDPIPPSA 241
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDL 324
R + LD V+K + KN + AE DL
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 42/297 (14%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 65
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 126 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 232
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIR 343
++ +++L+K N + + + C + N +RP+ ++ + ++ IR
Sbjct: 233 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 289
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 134/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 97
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 158 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 264
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR
Sbjct: 265 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324
Query: 347 FG 348
G
Sbjct: 325 AG 326
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 100/232 (43%), Gaps = 35/232 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 63 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+ADFG S + + T
Sbjct: 113 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 167
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
T + GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 168 T-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 216
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 63 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+ADFG S + + T
Sbjct: 113 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 167
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
T + GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 168 T-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQET 217
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 61 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 110
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+ADFG S +
Sbjct: 111 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---R 164
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
T + GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 214
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 65 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 114
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+ADFG S +
Sbjct: 115 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---R 168
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
T + GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 169 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 218
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 136/302 (45%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 67
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + + L+ +++
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HR++ + NIL++ R K+ DFG +K + D+ + K G +
Sbjct: 128 MEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 234
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 235 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
Query: 347 FG 348
G
Sbjct: 295 AG 296
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 100/232 (43%), Gaps = 35/232 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 65 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 114
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+ADFG S + + T
Sbjct: 115 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 169
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
T + GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 170 T-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 218
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 97/222 (43%), Gaps = 15/222 (6%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEI----RLRIAT---EVAG 175
I S + H N+++L G + L L R E + ++ R AT E+A
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
ALSY HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXGTLDYL 178
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
PE + +K D++S GV+ E L GK P NT QE
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 218
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 100/232 (43%), Gaps = 35/232 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 65 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 114
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+ADFG S + + T
Sbjct: 115 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRT 169
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
T + GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 170 T-LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 218
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 105/244 (43%), Gaps = 35/244 (14%)
Query: 51 DDSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDE 110
++ + + K SK+ A F + R LG+G G VY + + + K E
Sbjct: 5 EEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE 64
Query: 111 ELLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR 166
+ + E+ I S + H N+++L G + HD R E PL R
Sbjct: 65 KAGVEHQLRREVEIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYR 114
Query: 167 ----------LRIA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 213
R A TE+A ALSY HS + HRDIK N+LL K+ADFG
Sbjct: 115 ELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGW 171
Query: 214 SKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
S + + TT + GT YL PE + +K D++S GV+ E L GK P N
Sbjct: 172 S--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EAN 226
Query: 274 TSQE 277
T QE
Sbjct: 227 TYQE 230
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 105/244 (43%), Gaps = 35/244 (14%)
Query: 51 DDSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDE 110
++ + + K SK+ A F + R LG+G G VY + + + K E
Sbjct: 14 EEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE 73
Query: 111 ELLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR 166
+ + E+ I S + H N+++L G + HD R E PL R
Sbjct: 74 KAGVEHQLRREVEIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYR 123
Query: 167 ----------LRIA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 213
R A TE+A ALSY HS + HRDIK N+LL K+ADFG
Sbjct: 124 ELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGW 180
Query: 214 SKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
S + + TT + GT YL PE + +K D++S GV+ E L GK P N
Sbjct: 181 S--VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EAN 235
Query: 274 TSQE 277
T QE
Sbjct: 236 TYQE 239
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 134/302 (44%), Gaps = 42/302 (13%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H + LG+G G+V Y + ++ G ++AVKK + + ++ L +F EI IL
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 69
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
+ H N+VK G C +P L D+ + + L+ +++
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGY 234
+ YL + HRD+ + NIL++ R K+ DFG +K + D+ K G +
Sbjct: 130 MEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE S+ + SDV+SFGVVL EL T +++ S A F+ + +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMRMIGNDKQ 236
Query: 295 YDILDDQVVKLVKKNQIMAFAN--------LAERCLDLNGKKRPTMEEVTMELNGIRGSN 346
++ +++L+K N + + + C + N +RP+ ++ + ++ IR +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
Query: 347 FG 348
G
Sbjct: 297 AG 298
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I + +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINAMLN 63
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 31/264 (11%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+GQG GTVY M + G+ +A+++ L ++ K E INEI+++ + + N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 138 GCCL---ETEVPLLHLHDHHRNEEFPLTWEIRLRIAT---EVAGALSYLHSAASSPIYHR 191
L E V + +L + T +IA E AL +LHS + + HR
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHR 140
Query: 192 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDV 251
DIKS NILL K+ DFG I +Q+ +++ GT ++ PE K D+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 252 YSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQI 311
+S G++ +E++ G+ P + EN A + + + N ++ + + + +
Sbjct: 200 WSLGIMAIEMIEGEPPYLN------ENPLRALYLIAT---NGTPELQNPEKLSAI----- 245
Query: 312 MAFANLAERCLDLNGKKRPTMEEV 335
F + RCLD++ +KR + +E+
Sbjct: 246 --FRDFLNRCLDMDVEKRGSAKEL 267
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 96/226 (42%), Gaps = 35/226 (15%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 66 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + T++ GT
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGT 169
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 67 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 116
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + T + GT
Sbjct: 117 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGT 170
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 214
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K E IN++ +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-----LN 63
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 113/284 (39%), Gaps = 52/284 (18%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 66 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + T + GT
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGT 169
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRK 291
YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RI 218
Query: 292 NHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + D V + + +L R L N +RP + EV
Sbjct: 219 SRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 115/284 (40%), Gaps = 52/284 (18%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 70 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 119
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + + TT + GT
Sbjct: 120 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGT 173
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRK 291
YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RI 222
Query: 292 NHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + D V + + +L R L N +RP + EV
Sbjct: 223 SRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 258
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 115/284 (40%), Gaps = 52/284 (18%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 65 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 114
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + + TT + GT
Sbjct: 115 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGT 168
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRK 291
YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RI 217
Query: 292 NHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + D V + + +L R L N +RP + EV
Sbjct: 218 SRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 253
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 66 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + T + GT
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGT 169
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 213
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 75 VNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ R LG+G G V+ +D ++AVK K A D+ ++F E +L+ +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR----KDFHREAELLTNL 72
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHR---------------------NEEFPLTWEIRL 167
H ++VK G C+E + PL+ + ++ + N LT L
Sbjct: 73 QHEHIVKFYGVCVEGD-PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTT 226
IA ++A + YL AS HRD+ + N L+ E K+ DFG S+ + + D V
Sbjct: 132 HIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 227 KIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE + T +SDV+S GVVL E+ T GK+P + N
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 28/213 (13%)
Query: 76 NRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDD----EELLKLEEFINEIVILSQINHR 131
+R++G+G G VY G D A + + A+ E+ ++E F+ E +++ +NH
Sbjct: 26 DRVIGKGHFGVVYHGEYID---QAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82
Query: 132 NVVKLLGCCLETE-VP--LLHLHDHH------RNEEFPLTWEIRLRIATEVAGALSYLHS 182
NV+ L+G L E +P LL H R+ + T + + +VA + YL
Sbjct: 83 NVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL-- 140
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD------QTHVTTKIQGTFGYLE 236
A HRD+ + N +LDE + KVADFG ++ I +D Q H ++ + LE
Sbjct: 141 -AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKWTALE 198
Query: 237 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
Q+ + T KSDV+SFGV+L ELLT P +
Sbjct: 199 SL--QTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 95/227 (41%), Gaps = 35/227 (15%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 66 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + T + GT
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGT 169
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQET 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 97/226 (42%), Gaps = 35/226 (15%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 66 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + + TT + GT
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGT 169
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 213
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 63
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 63
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 100/232 (43%), Gaps = 35/232 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 62 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 111
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+A+FG S + + T
Sbjct: 112 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRT 166
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
T + GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 167 T-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 63 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+A+FG S + + T
Sbjct: 113 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRT 167
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
T + GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 168 T-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQET 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 61
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 41/279 (14%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V+ G L D ++AVK + + + LK +F+ E IL Q +H N+V+L+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD--LK-AKFLQEARILKQYSHPNIVRLI 178
Query: 138 GCCLETEVPLLHLHDHHRNEEFPLTW----EIRLRIAT------EVAGALSYLHSAASSP 187
G C + + P+ + + + +F LT+ RLR+ T + A + YL S
Sbjct: 179 GVCTQKQ-PIYIVMELVQGGDF-LTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI-QGTFGYLEPEYHQSSQLT 246
HRD+ + N L+ E+ K++DFG S+ A + + Q + PE + +
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 247 DKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS--LAAFFVHSMRKNHMYDILDDQVVK 304
+SDV+SFG++L E FS G + N+S FV + ++ D V +
Sbjct: 294 SESDVWSFGILLWE-------TFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFR 346
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIR 343
L+ E+C +RP+ + EL IR
Sbjct: 347 LM------------EQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 125/283 (44%), Gaps = 45/283 (15%)
Query: 70 TNHFNVNRILGQGGQGTVYKGMLEDGRI---MAVK--KFKLAVDDEELLKLEEFINEIVI 124
++ + + ILG GG V+ + D R+ +AVK + LA D L+ F E
Sbjct: 11 SDRYELGEILGFGGMSEVH--LARDLRLHRDVAVKVLRADLARDPSFYLR---FRREAQN 65
Query: 125 LSQINHRNVVKLLGCCLETEVPL-------------LHLHD--HHRNEEFPLTWEIRLRI 169
+ +NH +V + E E P + L D H E P+T + + +
Sbjct: 66 AAALNHPAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEV 121
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TK 227
+ AL++ H I HRD+K NI++ KV DFG ++ IA VT
Sbjct: 122 IADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 228 IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
+ GT YL PE + + +SDVYS G VL E+LTG+ P TG++ VS+A V
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSP---VSVAYQHVR 233
Query: 288 ------SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDL 324
S R + LD V+K + KN + AE DL
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 97/232 (41%), Gaps = 35/232 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 61 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 110
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+ADFG S +
Sbjct: 111 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT- 166
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 167 --LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 97/233 (41%), Gaps = 35/233 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 63 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+ADFG S +
Sbjct: 113 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---R 166
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 167 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQET 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 97/232 (41%), Gaps = 35/232 (15%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
SK+ A F + R LG+G G VY + + + K E+ + E+
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LR 168
I S + H N+++L G + HD R E PL R R
Sbjct: 62 EIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 111
Query: 169 IA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
A TE+A ALSY HS + HRDIK N+LL K+ADFG S +
Sbjct: 112 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---R 165
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ GT YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 166 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 215
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 75 VNRILGQGGQGTVYKGMLEDGR----IMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
+NRILG+G G VY+G+ + + +AVK K D L E+F++E VI+ ++H
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCK---KDCTLDNKEKFMSEAVIMKNLDH 68
Query: 131 RNVVKLLGCCLETEVPLL----------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYL 180
++VKL+G E ++ H + ++N LT + + ++ A++YL
Sbjct: 69 PHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYL 125
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYH 240
S HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 126 ESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 182
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ T SDV+ F V + E+L+ GK+P F N
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 63
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 63
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K EI I +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINKMLN 63
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 75 VNRILGQGGQGTVYKGMLEDGR----IMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
+NRILG+G G VY+G+ + + +AVK K D L E+F++E VI+ ++H
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCK---KDCTLDNKEKFMSEAVIMKNLDH 72
Query: 131 RNVVKLLGCCLETEVPLL----------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYL 180
++VKL+G E ++ H + ++N LT + + ++ A++YL
Sbjct: 73 PHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYL 129
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYH 240
S HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 130 ESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 186
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ T SDV+ F V + E+L+ GK+P F N
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 56/312 (17%)
Query: 71 NHFNVNRILGQGGQGTVYKGML--EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
F + R+LG+G G+V + L EDG + V L D +EEF+ E + +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 129 NHRNVVKLLGCCLETE-----------VPLLHLHDHHR--------NEEFPLTWEIRLRI 169
+H +V KL+G L + +P + D H F L + +R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
++A + YL +S HRD+ + N +L E VADFG S+ I + Q
Sbjct: 143 MVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR----Q 195
Query: 230 GTFGYLEPEYHQSSQLTDK-----SDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAA 283
G L ++ L D SDV++FGV + E++T G+ P EN +
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI-----ENAEIYN 250
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIR 343
+ + R + +++ +L +C + K+RP+ + MEL I
Sbjct: 251 YLIGGNRLKQPPECMEE-------------VYDLMYQCWSADPKQRPSFTCLRMELENI- 296
Query: 344 GSNFGHKMIYST 355
GH + ST
Sbjct: 297 ---LGHLSVLST 305
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 75 VNRILGQGGQGTVYKGMLEDGR----IMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
+NRILG+G G VY+G+ + + +AVK K D L E+F++E VI+ ++H
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCK---KDCTLDNKEKFMSEAVIMKNLDH 84
Query: 131 RNVVKLLGCCLETEVPLL----------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYL 180
++VKL+G E ++ H + ++N LT + + ++ A++YL
Sbjct: 85 PHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYL 141
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYH 240
S HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 142 ESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 198
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ T SDV+ F V + E+L+ GK+P F N
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 232
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 43/280 (15%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V+ G L D ++AVK + + + LK +F+ E IL Q +H N+V+L+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD--LK-AKFLQEARILKQYSHPNIVRLI 178
Query: 138 GCCLETEVPLLHLHDHHRNEEFPLTW----EIRLRIAT------EVAGALSYLHSAASSP 187
G C + + P+ + + + +F LT+ RLR+ T + A + YL S
Sbjct: 179 GVCTQKQ-PIYIVMELVQGGDF-LTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQL 245
HRD+ + N L+ E+ K++DFG S+ A D + + Q + PE +
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEA-DGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 246 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS--LAAFFVHSMRKNHMYDILDDQVV 303
+ +SDV+SFG++L E FS G + N+S FV + ++ D V
Sbjct: 293 SSESDVWSFGILLWE-------TFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVF 345
Query: 304 KLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIR 343
+L+ E+C +RP+ + EL IR
Sbjct: 346 RLM------------EQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 79 LGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
LG+G G V+ +D ++AVK K A + ++F E +L+ + H++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR----QDFQREAELLTMLQHQH 81
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEF-----------------------PLTWEIRLRI 169
+V+ G C E PLL + ++ R+ + PL L +
Sbjct: 82 IVRFFGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKI 228
A++VA + YL A HRD+ + N L+ + K+ DFG S+ I + D V +
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 229 QGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNT 274
++ PE + T +SDV+SFGVVL E+ T GK+P + NT
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 244
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 31/264 (11%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+GQG GTVY M + G+ +A+++ L ++ K E INEI+++ + + N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 138 GCCL---ETEVPLLHLHDHHRNEEFPLTWEIRLRIAT---EVAGALSYLHSAASSPIYHR 191
L E V + +L + T +IA E AL +LHS + + HR
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHR 141
Query: 192 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDV 251
+IKS NILL K+ DFG I +Q+ +T + GT ++ PE K D+
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 200
Query: 252 YSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQI 311
+S G++ +E++ G+ P + EN A + + + N ++ + + + +
Sbjct: 201 WSLGIMAIEMIEGEPPYLN------ENPLRALYLIAT---NGTPELQNPEKLSAI----- 246
Query: 312 MAFANLAERCLDLNGKKRPTMEEV 335
F + RCL+++ +KR + +E+
Sbjct: 247 --FRDFLNRCLEMDVEKRGSAKEL 268
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 70 TNHFNVNRILGQGGQGTVYKGMLEDGRI---MAVK--KFKLAVDDEELLKLEEFINEIVI 124
++ + + ILG GG V+ + D R+ +AVK + LA D L+ F E
Sbjct: 11 SDRYELGEILGFGGMSEVH--LARDLRLHRDVAVKVLRADLARDPSFYLR---FRREAQN 65
Query: 125 LSQINHRNVVKL--LGCCLETEVPLLHLHDHHRN---------EEFPLTWEIRLRIATEV 173
+ +NH +V + G PL ++ + + E P+T + + + +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 174 AGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQGT 231
AL++ H I HRD+K NI++ KV DFG ++ IA VT + GT
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH---- 287
YL PE + + +SDVYS G VL E+LTG+ P TG++ VS+A V
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSP---VSVAYQHVREDPI 237
Query: 288 --SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDL 324
S R + LD V+K + KN + AE DL
Sbjct: 238 PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 113/284 (39%), Gaps = 52/284 (18%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 63 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 112
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + T + GT
Sbjct: 113 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 166
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRK 291
YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RI 215
Query: 292 NHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + D V + + +L R L N +RP + EV
Sbjct: 216 SRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 251
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K E IN++ +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 63
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 79 LGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
LG+G G V+ +D ++AVK K A + ++F E +L+ + H++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR----QDFQREAELLTMLQHQH 75
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEF-----------------------PLTWEIRLRI 169
+V+ G C E PLL + ++ R+ + PL L +
Sbjct: 76 IVRFFGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKI 228
A++VA + YL A HRD+ + N L+ + K+ DFG S+ I + D V +
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 229 QGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNT 274
++ PE + T +SDV+SFGVVL E+ T GK+P + NT
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 238
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 126/264 (47%), Gaps = 31/264 (11%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+GQG GTVY M + G+ +A+++ L ++ K E INEI+++ + + N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 138 GCCL---ETEVPLLHLHDHHRNEEFPLTWEIRLRIAT---EVAGALSYLHSAASSPIYHR 191
L E V + +L + T +IA E AL +LHS + + HR
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHR 141
Query: 192 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDV 251
DIKS NILL K+ DFG I +Q+ + + GT ++ PE K D+
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDI 200
Query: 252 YSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQI 311
+S G++ +E++ G+ P + EN A + + + N ++ + + + +
Sbjct: 201 WSLGIMAIEMIEGEPPYLN------ENPLRALYLIAT---NGTPELQNPEKLSAI----- 246
Query: 312 MAFANLAERCLDLNGKKRPTMEEV 335
F + RCL+++ +KR + +E+
Sbjct: 247 --FRDFLNRCLEMDVEKRGSAKEL 268
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 122/279 (43%), Gaps = 37/279 (13%)
Query: 70 TNHFNVNRILGQGGQGTVYKGMLEDGRI---MAVK--KFKLAVDDEELLKLEEFINEIVI 124
++ + + ILG GG V+ + D R+ +AVK + LA D L+ F E
Sbjct: 28 SDRYELGEILGFGGMSEVH--LARDLRLHRDVAVKVLRADLARDPSFYLR---FRREAQN 82
Query: 125 LSQINHRNVVKL--LGCCLETEVPLLHLHDHHRN---------EEFPLTWEIRLRIATEV 173
+ +NH +V + G PL ++ + + E P+T + + + +
Sbjct: 83 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 142
Query: 174 AGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQGT 231
AL++ H I HRD+K NI++ KV DFG ++ IA VT + GT
Sbjct: 143 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH---- 287
YL PE + + +SDVYS G VL E+LTG+ P T VS+A V
Sbjct: 200 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-----TGDSPVSVAYQHVREDPI 254
Query: 288 --SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDL 324
S R + LD V+K + KN + AE DL
Sbjct: 255 PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 293
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 126/264 (47%), Gaps = 31/264 (11%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+GQG GTVY M + G+ +A+++ L ++ K E INEI+++ + + N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 138 GCCL---ETEVPLLHLHDHHRNEEFPLTWEIRLRIAT---EVAGALSYLHSAASSPIYHR 191
L E V + +L + T +IA E AL +LHS + + HR
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHR 140
Query: 192 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDV 251
DIKS NILL K+ DFG I +Q+ + + GT ++ PE K D+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 252 YSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQI 311
+S G++ +E++ G+ P + EN A + + + N ++ + + + +
Sbjct: 200 WSLGIMAIEMIEGEPPYLN------ENPLRALYLIAT---NGTPELQNPEKLSAI----- 245
Query: 312 MAFANLAERCLDLNGKKRPTMEEV 335
F + RCL+++ +KR + +E+
Sbjct: 246 --FRDFLNRCLEMDVEKRGSAKEL 267
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 31/210 (14%)
Query: 73 FNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHR 131
F+V LG+G G+VYK + E G+I+A+K+ + D L+E I EI I+ Q +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD------LQEIIKEISIMQQCDSP 84
Query: 132 NVVKLLG--------------CCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
+VVK G C + ++ L + E+ EI + + + G L
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED-----EIATILQSTLKG-L 138
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEP 237
YLH HRDIK+ NILL+ AK+ADFG + + D + GT ++ P
Sbjct: 139 EYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAP 194
Query: 238 EYHQSSQLTDKSDVYSFGVVLVELLTGKKP 267
E Q +D++S G+ +E+ GK P
Sbjct: 195 EVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM---LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+++ + LG+G G V + E+ + + K AVD E +K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
H NVVK G E + L L E F I I A + H + +Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFD---RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 190 -------HRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+ PE +
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 242 SSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + DV+S G+VL +L G+ P ++ QE
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 48/257 (18%)
Query: 54 VIDRCKLFSSKELDKATNHFNVNRI-----LGQGGQGTVYKGML------EDGRIMAVKK 102
+I+ + FS D +H I LG+G G V+ +D ++AVK
Sbjct: 23 IIENPQYFS----DACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA 78
Query: 103 FKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEF--- 159
K A + ++F E +L+ + H+++V+ G C E PLL + ++ R+ +
Sbjct: 79 LKEASESAR----QDFQREAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHGDLNRF 133
Query: 160 --------------------PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNIL 199
PL L +A++VA + YL A HRD+ + N L
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCL 190
Query: 200 LDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVL 258
+ + K+ DFG S+ I + D V + ++ PE + T +SDV+SFGVVL
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 259 VELLT-GKKPIFSTGNT 274
E+ T GK+P + NT
Sbjct: 251 WEIFTYGKQPWYQLSNT 267
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 112/284 (39%), Gaps = 52/284 (18%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 66 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + + GT
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGT 169
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRK 291
YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RI 218
Query: 292 NHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + D V + + +L R L N +RP + EV
Sbjct: 219 SRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 102/244 (41%), Gaps = 35/244 (14%)
Query: 51 DDSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDE 110
++ + + K SK+ A F + R LG+G G VY + + + K E
Sbjct: 14 EEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE 73
Query: 111 ELLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR 166
+ + E+ I S + H N+++L G + HD R E PL R
Sbjct: 74 KAGVEHQLRREVEIQSHLRHPNILRLYG----------YFHDATRVYLILEYAPLGTVYR 123
Query: 167 ----------LRIA---TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 213
R A TE+A ALSY HS + HRDIK N+LL K+ADFG
Sbjct: 124 ELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGW 180
Query: 214 SKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
S + + GT YL PE + +K D++S GV+ E L GK P N
Sbjct: 181 SVHAPSSR---RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EAN 235
Query: 274 TSQE 277
T QE
Sbjct: 236 TYQE 239
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 94/226 (41%), Gaps = 35/226 (15%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 69 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + + GT
Sbjct: 119 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGT 172
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQE 216
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 95/227 (41%), Gaps = 35/227 (15%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY ++ + + K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 66 RHPNILRLYG----------YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + + GT
Sbjct: 116 ELANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGT 169
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
YL PE + +K D++S GV+ E L GK P NT Q+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQDT 214
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 112/284 (39%), Gaps = 52/284 (18%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 66 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + + GT
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGT 169
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRK 291
YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RI 218
Query: 292 NHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + D V + + +L R L N +RP + EV
Sbjct: 219 SRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 110/228 (48%), Gaps = 29/228 (12%)
Query: 70 TNHFNVNRILGQGGQGTVY----KGMLEDGRIMAVKKFK---LAVDDEELLKLEEFINEI 122
+HF + ++LGQG G V+ + G + A+K K L V D K+E
Sbjct: 27 PSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER----- 81
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHR--------NEEFPLTWE-IRLRIATEV 173
IL+ +NH VVKL +TE L + D R ++E T E ++ +A E+
Sbjct: 82 DILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-EL 139
Query: 174 AGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 233
A L +LHS I +RD+K NILLDE K+ DFG SK A+D GT
Sbjct: 140 ALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVE 195
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 281
Y+ PE + +D +S+GV++ E+LTG P G +E ++L
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF--QGKDRKETMTL 241
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 110/228 (48%), Gaps = 29/228 (12%)
Query: 70 TNHFNVNRILGQGGQGTVY---KGMLEDGR----IMAVKKFKLAVDDEELLKLEEFINEI 122
+ F + ++LGQG G V+ K D R + +KK L V D K+E
Sbjct: 24 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER----- 78
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHR--------NEEFPLTWE-IRLRIATEV 173
IL ++NH +VKL +TE L + D R ++E T E ++ +A E+
Sbjct: 79 DILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-EL 136
Query: 174 AGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 233
A AL +LHS I +RD+K NILLDE K+ DFG SK ++D GT
Sbjct: 137 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVE 192
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 281
Y+ PE T +D +SFGV++ E+LTG P G +E +++
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTM 238
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 110/228 (48%), Gaps = 29/228 (12%)
Query: 70 TNHFNVNRILGQGGQGTVY---KGMLEDGR----IMAVKKFKLAVDDEELLKLEEFINEI 122
+ F + ++LGQG G V+ K D R + +KK L V D K+E
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER----- 77
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHR--------NEEFPLTWE-IRLRIATEV 173
IL ++NH +VKL +TE L + D R ++E T E ++ +A E+
Sbjct: 78 DILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-EL 135
Query: 174 AGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 233
A AL +LHS I +RD+K NILLDE K+ DFG SK ++D GT
Sbjct: 136 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVE 191
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 281
Y+ PE T +D +SFGV++ E+LTG P G +E +++
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTM 237
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 110/228 (48%), Gaps = 29/228 (12%)
Query: 70 TNHFNVNRILGQGGQGTVY---KGMLEDGR----IMAVKKFKLAVDDEELLKLEEFINEI 122
+ F + ++LGQG G V+ K D R + +KK L V D K+E
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER----- 77
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHR--------NEEFPLTWE-IRLRIATEV 173
IL ++NH +VKL +TE L + D R ++E T E ++ +A E+
Sbjct: 78 DILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-EL 135
Query: 174 AGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 233
A AL +LHS I +RD+K NILLDE K+ DFG SK ++D GT
Sbjct: 136 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVE 191
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 281
Y+ PE T +D +SFGV++ E+LTG P G +E +++
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTM 237
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
A F + R LG+G G VY + + + K E+ + E+ I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---T 171
H N+++L G + HD R E PL R R A T
Sbjct: 69 RHPNILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
E+A ALSY HS + HRDIK N+LL K+ADFG S + + GT
Sbjct: 119 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGT 172
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
YL PE + +K D++S GV+ E L GK P NT QE
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQET 217
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 77 RILGQGGQGTVYKGM-LEDGRIMAVK-KFKLAVDDEELLKLEEFINEIVILSQINHRNVV 134
++LG G GTVYKG+ + DG + + K+ ++ +E ++E +++ + V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 135 KLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSP 187
+LLG CL + V P L DH R L + L ++A +SYL
Sbjct: 83 RLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR--- 139
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLT 246
+ HRD+ + N+L+ K+ DFG ++ + +D+T + ++ E + T
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFT 199
Query: 247 DKSDVYSFGVVLVELLT-GKKP 267
+SDV+S+GV + EL+T G KP
Sbjct: 200 HQSDVWSYGVTVWELMTFGAKP 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 77 RILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLE-EFINEIVILSQINHRNVV 134
++LG G GTVYKG+ + +G + + +++ K EF++E +I++ ++H ++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 135 KLLGCCLETEVPLL-----------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSA 183
+LLG CL + L+ ++H+H N + ++ L ++A + YL
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN----IGSQLLLNWCVQIAKGMMYLEER 136
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLEPEYHQS 242
+ HRD+ + N+L+ K+ DFG ++ + D+ + ++ E
Sbjct: 137 R---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 243 SQLTDKSDVYSFGVVLVELLT-GKKP 267
+ T +SDV+S+GV + EL+T G KP
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 28/217 (12%)
Query: 76 NRILGQGGQGTVYKGMLEDGR-----IMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
+++G G G VYKGML+ +A+K K +++ + +F+ E I+ Q +H
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV---DFLGEAGIMGQFSH 105
Query: 131 RNVVKLLGCCLETEVPLLHLHDHHRNE-----------EFPLTWEIRLRIATEVAGALSY 179
N+++L G + + P++ + ++ N EF + L++ + G +
Sbjct: 106 HNIIRLEGVISKYK-PMMIITEYMENGALDKFLREKDGEFSV-----LQLVGMLRGIAAG 159
Query: 180 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ--THVTTKIQGTFGYLEP 237
+ A+ HRD+ + NIL++ KV+DFG S+ + D T+ T+ + + P
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
Query: 238 EYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
E + T SDV+SFG+V+ E++T G++P + N
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN 256
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 39/283 (13%)
Query: 73 FNVNRILGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHR 131
F + R LG G G V+ +GR A+K K + L ++E +E ++LS + H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-VRLKQVEHTNDERLMLSIVTHP 66
Query: 132 NVVKLLGCCLETEVPLLHLHDH----------HRNEEFPLTWEIRLRIATEVAGALSYLH 181
++++ G + + + + D+ +++ FP + A EV AL YLH
Sbjct: 67 FIIRMWGTFQDAQQ-IFMIMDYIEGGELFSLLRKSQRFPNP--VAKFYAAEVCLALEYLH 123
Query: 182 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
S I +RD+K NILLD+ K+ DFG +K++ VT + GT Y+ PE
Sbjct: 124 SKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYXLCGTPDYIAPEVVS 176
Query: 242 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTS------QENVSLAAFFVHSMRKNHMY 295
+ D +SFG+++ E+L G P + + + FF ++
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVK----- 231
Query: 296 DILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTME 338
D + +L+ ++ NL D+ K P +EV E
Sbjct: 232 ----DLLSRLITRDLSQRLGNLQNGTEDV--KNHPWFKEVVWE 268
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 52/312 (16%)
Query: 78 ILGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKL 136
+LG+G G K E G +M +K+ L DEE + F+ E+ ++ + H NV+K
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKE--LIRFDEETQRT--FLKEVKVMRCLEHPNVLKF 72
Query: 137 LGCCLETEVPLLHLHDHHR-----------NEEFPLTWEIRLRIATEVAGALSYLHSAAS 185
+G L + L + ++ + + ++P W R+ A ++A ++YLHS
Sbjct: 73 IGV-LYKDKRLNFITEYIKGGTLRGIIKSMDSQYP--WSQRVSFAKDIASGMAYLHSMN- 128
Query: 186 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT-------------KIQGTF 232
I HRD+ S N L+ E VADFG ++ + ++T + G
Sbjct: 129 --IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKN 292
++ PE +K DV+SFG+VL E I N + + F ++R
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCE-------IIGRVNADPDYLPRTMDFGLNVR-- 237
Query: 293 HMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGH-KM 351
LD + N +F + RC DL+ +KRP+ ++ L +R GH +
Sbjct: 238 ---GFLD----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPL 290
Query: 352 IYSTGTLLRLFW 363
L R FW
Sbjct: 291 GPQLEQLDRGFW 302
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 108/208 (51%), Gaps = 26/208 (12%)
Query: 77 RILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLE-EFINEIVILSQINHRNVV 134
++LG G GTVYKG+ + +G + + +++ K EF++E +I++ ++H ++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 135 KLLGCCLETEVPLL-----------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSA 183
+LLG CL + L+ ++H+H N + ++ L ++A + YL
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN----IGSQLLLNWCVQIAKGMMYLEER 159
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGYLEPEYH 240
+ HRD+ + N+L+ K+ DFG ++ + D+ K+ + LE ++
Sbjct: 160 R---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 216
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + T +SDV+S+GV + EL+T G KP
Sbjct: 217 R--KFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 132 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 189 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 131 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 121/284 (42%), Gaps = 46/284 (16%)
Query: 73 FNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHR 131
F + ++G G G VYKG ++ G++ A+K + D+EE +K E IN + S +HR
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE--INMLKKYS--HHR 81
Query: 132 NVVKLLGCCLETEVPLL--------------HLHDHHRNEEF-PLTWEIRLRIATEVAGA 176
N+ G ++ P + + D +N + L E I E+
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
LS+LH + HRDIK N+LL E K+ DFG S + T I GT ++
Sbjct: 142 LSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMA 197
Query: 237 PEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRK 291
PE + D KSD++S G+ +E+ G P+ +H MR
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD---------------MHPMRA 242
Query: 292 NHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
++ I + +L K F + E CL N +RP E++
Sbjct: 243 --LFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQL 284
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 126/293 (43%), Gaps = 36/293 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG--MLEDGRIMAV--KKFKLAVDDEELLKLEE 117
S+++ + + R +G+G G V++G M + MAV K K D E+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS---VREK 57
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIA 170
F+ E + + Q +H ++VKL+G E V ++ L + +F L + A
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+++ AL+YL S HRDI + N+L+ K+ DFG S+++ + +K +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSM 289
++ PE + T SDV+ FGV + E+L G KP +
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF------------------QGV 216
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ N + +++ + N +L +C + +RP E+ +L+ I
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 75 VNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ R LG+G G V+ +D ++AVK A+ D L ++F E +L+ +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVK----ALKDPTLAARKDFQREAELLTNL 74
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDH------------------------HRNEEFPLTWE 164
H ++VK G C + + PL+ + ++ R + L
Sbjct: 75 QHEHIVKFYGVCGDGD-PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 223
L IA+++A + YL AS HRD+ + N L+ K+ DFG S+ + + D
Sbjct: 134 QMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR 190
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNT 274
V ++ PE + T +SDV+SFGV+L E+ T GK+P F NT
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 134
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 135 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 192 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 131 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 138 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 195 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 134 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 191 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 80
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 140
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 141 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 198 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 124
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 125 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 182 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 133 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 190 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 133 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 190 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 133 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 190 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 131 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 36/293 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG--MLEDGRIMAV--KKFKLAVDDEELLKLEE 117
S+++ + + R +G+G G V++G M + MAV K K D E+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS---VREK 57
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIA 170
F+ E + + Q +H ++VKL+G E V ++ L + +F L + A
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+++ AL+YL S HRDI + N+L+ K+ DFG S+++ +K +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSM 289
++ PE + T SDV+ FGV + E+L G KP +
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF------------------QGV 216
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ N + +++ + N +L +C + +RP E+ +L+ I
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 134 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 191 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 134 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 191 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 138 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 195 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 134
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 135 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 192 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 134 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 191 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 132 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 189 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 133 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 190 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 131 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 133 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 190 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 76
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 136
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 137 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 194 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 67
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGM 127
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 128 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 185 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 95
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 155
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 156 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 213 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 131 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 36/293 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG--MLEDGRIMAV--KKFKLAVDDEELLKLEE 117
S+++ + + R +G+G G V++G M + MAV K K D E+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS---VREK 57
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIA 170
F+ E + + Q +H ++VKL+G E V ++ L + ++ L + A
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+++ AL+YL S HRDI + N+L+ K+ DFG S+++ + +K +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSM 289
++ PE + T SDV+ FGV + E+L G KP +
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF------------------QGV 216
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ N + +++ + N +L +C + +RP E+ +L+ I
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 128/299 (42%), Gaps = 36/299 (12%)
Query: 56 DRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKG--MLEDGRIMAV--KKFKLAVDDEE 111
D + S+++ + + R +G+G G V++G M + MAV K K D
Sbjct: 375 DTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS- 433
Query: 112 LLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWE 164
E+F+ E + + Q +H ++VKL+G E V ++ L + +F L
Sbjct: 434 --VREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLA 491
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 224
+ A +++ AL+YL S HRDI + N+L+ K+ DFG S+++ +
Sbjct: 492 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 548
Query: 225 TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAA 283
+K + ++ PE + T SDV+ FGV + E+L G KP
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--------------- 593
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
++ N + +++ + N +L +C + +RP E+ +L+ I
Sbjct: 594 ---QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G+V +G+ + K+ E EE + E I+ Q+++ +V+L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 139 CCLETEVPL---------LHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
C + L LH + EE P++ + +V+ + YL
Sbjct: 78 VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEKN---FV 132
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYHQSSQLTD 247
HRD+ + N+LL R+ AK++DFG SK + D ++ T + G + + PE + +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
+SDV+S+GV + E L+ G+KP
Sbjct: 193 RSDVWSYGVTMWEALSYGQKP 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 128/299 (42%), Gaps = 36/299 (12%)
Query: 56 DRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKG--MLEDGRIMAV--KKFKLAVDDEE 111
D + S+++ + + R +G+G G V++G M + MAV K K D
Sbjct: 375 DTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS- 433
Query: 112 LLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWE 164
E+F+ E + + Q +H ++VKL+G E V ++ L + +F L
Sbjct: 434 --VREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLA 491
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 224
+ A +++ AL+YL S HRDI + N+L+ K+ DFG S+++ +
Sbjct: 492 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYK 548
Query: 225 TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAA 283
+K + ++ PE + T SDV+ FGV + E+L G KP
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--------------- 593
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
++ N + +++ + N +L +C + +RP E+ +L+ I
Sbjct: 594 ---QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 36/293 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGML----EDGRIMAVKKFKLAVDDEELLKLEE 117
S+++ + + R +G+G G V++G+ +A+K K D E+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREK 57
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIA 170
F+ E + + Q +H ++VKL+G E V ++ L + ++ L + A
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+++ AL+YL S HRDI + N+L+ K+ DFG S+++ + +K +
Sbjct: 118 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSM 289
++ PE + T SDV+ FGV + E+L G KP +
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF------------------QGV 216
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ N + +++ + N +L +C + +RP E+ +L+ I
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 93/223 (41%), Gaps = 35/223 (15%)
Query: 73 FNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
F++ R LG+G G VY + + K E+ + E+ I S + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 133 VVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---TEVAG 175
+++L G + HD R E PL R R A TE+A
Sbjct: 74 ILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
ALSY HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYL 177
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
PE + +K D++S GV+ E L G P +T QE
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF--EAHTYQET 218
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 36/293 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGML----EDGRIMAVKKFKLAVDDEELLKLEE 117
S+++ + + R +G+G G V++G+ +A+K K D E+
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREK 85
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIA 170
F+ E + + Q +H ++VKL+G E V ++ L + ++ L + A
Sbjct: 86 FLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 145
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+++ AL+YL S HRDI + N+L+ K+ DFG S+++ + +K +
Sbjct: 146 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 202
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSM 289
++ PE + T SDV+ FGV + E+L G KP +
Sbjct: 203 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF------------------QGV 244
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ N + +++ + N +L +C + +RP E+ +L+ I
Sbjct: 245 KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++LG G GTVYKG+ I +K K+ V EL + +E ++E +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 164
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 165 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 222 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 36/293 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGML----EDGRIMAVKKFKLAVDDEELLKLEE 117
S+++ + + R +G+G G V++G+ +A+K K D E+
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREK 62
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIA 170
F+ E + + Q +H ++VKL+G E V ++ L + ++ L + A
Sbjct: 63 FLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 122
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+++ AL+YL S HRDI + N+L+ K+ DFG S+++ + +K +
Sbjct: 123 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSM 289
++ PE + T SDV+ FGV + E+L G KP +
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF------------------QGV 221
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ N + +++ + N +L +C + +RP E+ +L+ I
Sbjct: 222 KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELL 113
++ E + A ++R LGQG G VY+G+ E +A+K A E +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 114 KLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL---------------HLHDHHRNEE 158
EF+NE ++ + N +VV+LLG + + L+ L N
Sbjct: 68 ---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 159 F--PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 216
P + +++A E+A ++YL++ + HRD+ + N ++ E + K+ DFG ++
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 217 IA-MDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 182 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELL 113
+F E + A ++R LGQG G VY+G+ E +A+K A E +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 114 KLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL---------------HLHDHHRNEE 158
EF+NE ++ + N +VV+LLG + + L+ L N
Sbjct: 65 ---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 159 F--PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 216
P + +++A E+A ++YL++ + HRD+ + N ++ E + K+ DFG ++
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 217 I-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 36/293 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGML----EDGRIMAVKKFKLAVDDEELLKLEE 117
S+++ + + R +G+G G V++G+ +A+K K D E+
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREK 59
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIA 170
F+ E + + Q +H ++VKL+G E V ++ L + ++ L + A
Sbjct: 60 FLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 119
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+++ AL+YL S HRDI + N+L+ K+ DFG S+++ + +K +
Sbjct: 120 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 176
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSM 289
++ PE + T SDV+ FGV + E+L G KP +
Sbjct: 177 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF------------------QGV 218
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ N + +++ + N +L +C + +RP E+ +L+ I
Sbjct: 219 KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 36/293 (12%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGML----EDGRIMAVKKFKLAVDDEELLKLEE 117
S+++ + + R +G+G G V++G+ +A+K K D E+
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREK 60
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIA 170
F+ E + + Q +H ++VKL+G E V ++ L + ++ L + A
Sbjct: 61 FLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 120
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+++ AL+YL S HRDI + N+L+ K+ DFG S+++ + +K +
Sbjct: 121 YQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 177
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSM 289
++ PE + T SDV+ FGV + E+L G KP +
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF------------------QGV 219
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ N + +++ + N +L +C + +RP E+ +L+ I
Sbjct: 220 KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 119/276 (43%), Gaps = 56/276 (20%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V+KG+ D R V K+ +E ++E+ EI +LSQ + V K G
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 139 CCLETEVPLLHLH--------DHHRNEEFPLTWEIRLRIAT---EVAGALSYLHSAASSP 187
L+ + + D R F +IAT E+ L YLHS
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGPFD-----EFQIATMLKEILKGLDYLHSEKK-- 141
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRDIK+ N+LL E+ K+ADFG + + Q T + GT ++ PE Q S
Sbjct: 142 -IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDS 199
Query: 248 KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVK 307
K+D++S G+ +EL G+ P N+ +H MR V+ L+
Sbjct: 200 KADIWSLGITAIELAKGEPP-----NSD----------MHPMR-----------VLFLIP 233
Query: 308 KNQ--------IMAFANLAERCLDLNGKKRPTMEEV 335
KN +F + CL+ + RPT +E+
Sbjct: 234 KNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKEL 269
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 30/234 (12%)
Query: 54 VIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAV 107
++ ++ E + A ++R LGQG G VY+G+ E +A+K A
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 108 DDEELLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL---------------HLHD 152
E + EF+NE ++ + N +VV+LLG + + L+ L
Sbjct: 61 SMRERI---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP 117
Query: 153 HHRNEEF--PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVAD 210
N P + +++A E+A ++YL++ + HRD+ + N ++ E + K+ D
Sbjct: 118 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGD 174
Query: 211 FGTSKFI-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
FG ++ I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 175 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 30/234 (12%)
Query: 54 VIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAV 107
++ ++ E + A ++R LGQG G VY+G+ E +A+K A
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 108 DDEELLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL---------------HLHD 152
E + EF+NE ++ + N +VV+LLG + + L+ L
Sbjct: 61 SMRERI---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP 117
Query: 153 HHRNEEF--PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVAD 210
N P + +++A E+A ++YL++ + HRD+ + N ++ E + K+ D
Sbjct: 118 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGD 174
Query: 211 FGTSKFI-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
FG ++ I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 175 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 23/226 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
+KELD + + R++G G G V G L+ G+ +A+K K+ +++ +F
Sbjct: 37 AKELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR---RDF 91
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLL--------HLHDHHRNEEFPLTWEIRLRIA 170
+ E I+ Q +H NVV L G + ++ L R + T + +
Sbjct: 92 LCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGML 151
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+A + YL A HRD+ + NIL++ KV+DFG S+ I D V T G
Sbjct: 152 RGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGG 208
Query: 231 TFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ PE Q + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 209 KIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 30/223 (13%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELLKLEEF 118
E + A ++R LGQG G VY+G+ E +A+K A E + EF
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---EF 60
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLL---------------HLHDHHRNEEF--PL 161
+NE ++ + N +VV+LLG + + L+ L N P
Sbjct: 61 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 162 TWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MD 220
+ +++A E+A ++YL++ + HRD+ + N ++ E + K+ DFG ++ I D
Sbjct: 121 SLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 221 QTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++L G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 138 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 195 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELL 113
++ E + A ++R LGQG G VY+G+ E +A+K A E +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 114 KLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL---------------HLHDHHRNEE 158
EF+NE ++ + N +VV+LLG + + L+ L N
Sbjct: 68 ---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 159 F--PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 216
P + +++A E+A ++YL++ + HRD+ + N ++ E + K+ DFG ++
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 217 I-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 182 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 58 CKLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKK-FKLAVDDEELLKL 115
++F EL K ++LG G GTV+KG+ + +G + + K+ D
Sbjct: 7 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 116 EEFINEIVILSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLR 168
+ + ++ + ++H ++V+LLG C + + PL L DH R L ++ L
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLN 119
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT-TK 227
++A + YL + HR++ + N+LL + +VADFG + + D + ++
Sbjct: 120 WGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 228 IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ ++ E + T +SDV+S+GV + EL+T G +P
Sbjct: 177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++L G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 138 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 195 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELL 113
++ E + A ++R LGQG G VY+G+ E +A+K A E +
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 114 KLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL---------------HLHDHHRNEE 158
EF+NE ++ + N +VV+LLG + + L+ L N
Sbjct: 96 ---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 159 F--PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 216
P + +++A E+A ++YL++ + HRD+ + N ++ E + K+ DFG ++
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 217 I-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 210 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL------EEFINEIVI 124
F ++L G GTVYKG+ I +K K+ V +EL + +E ++E +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
++ +++ +V +LLG CL + V P L D+ R + + + L ++A +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGTFGY 234
+YL + HRD+ + N+L+ K+ DFG +K + ++ K+ +
Sbjct: 131 NYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
LE H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 LESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 58 CKLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKK-FKLAVDDEELLKL 115
++F EL K ++LG G GTV+KG+ + +G + + K+ D
Sbjct: 25 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 116 EEFINEIVILSQINHRNVVKLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLR 168
+ + ++ + ++H ++V+LLG C + + PL L DH R L ++ L
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLN 137
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT-TK 227
++A + YL + HR++ + N+LL + +VADFG + + D + ++
Sbjct: 138 WGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 228 IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ ++ E + T +SDV+S+GV + EL+T G +P
Sbjct: 195 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 36/280 (12%)
Query: 75 VNRILGQGGQGTVYKGML----EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
+ R +G+G G V++G+ +A+K K D E+F+ E + + Q +H
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREKFLQEALTMRQFDH 67
Query: 131 RNVVKLLGCCLETEVPLL-------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSA 183
++VKL+G E V ++ L + ++ L + A +++ AL+YL S
Sbjct: 68 PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 127
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
HRDI + N+L+ K+ DFG S+++ + +K + ++ PE
Sbjct: 128 R---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 244 QLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQV 302
+ T SDV+ FGV + E+L G KP ++ N + +++
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPF------------------QGVKNNDVIGRIENGE 226
Query: 303 VKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ N +L +C + +RP E+ +L+ I
Sbjct: 227 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 48/292 (16%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK----LEEFINEIVILS 126
+ + + ++G G V A KK K+A+ L K ++E + EI +S
Sbjct: 15 DDYELQEVIGSGATAVV------QAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMS 68
Query: 127 QINHRNVV----------------KLL--GCCLETEVPLLHLHDHHRNEEFPLTWEIRLR 168
Q +H N+V KLL G L+ + H+ ++ L
Sbjct: 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI---IKHIVAKGEHKSGVLDESTIAT 125
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 228
I EV L YLH HRD+K+ NILL E ++ADFG S F+A K+
Sbjct: 126 ILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 229 QGTF----GYLEPEYHQSSQLTD-KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 283
+ TF ++ PE + + D K+D++SFG+ +EL TG P + +
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY-----PPMKVLM 237
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + + + D +++K K +F + CL + +KRPT E+
Sbjct: 238 LTLQNDPPSLETGVQDKEMLKKYGK----SFRKMISLCLQKDPEKRPTAAEL 285
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 39/273 (14%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG+G G V K + G+IMAVK+ + V+ +E +L ++ + + ++ V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL--LMDLDISMRTVDCPFTVTFY 72
Query: 138 GC---------CLE-TEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSP 187
G C+E + L + ++ + +I +IA + AL +LHS S
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 130
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-GTFGYLEPEYHQSS--- 243
+ HRD+K +N+L++ + K+ DFG S ++ D V I G Y+ PE
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPERINPELNQ 187
Query: 244 -QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQV 302
+ KSD++S G+ ++EL + P S G Q+ + ++++
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ----------------LKQVVEEPS 231
Query: 303 VKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+L F + +CL N K+RPT E+
Sbjct: 232 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 264
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELL 113
++ E + A ++R LGQG G VY+G+ E +A+K A E +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 114 KLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL---------------HLHDHHRNEE 158
EF+NE ++ + N +VV+LLG + + L+ L N
Sbjct: 74 ---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 159 F--PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 216
P + +++A E+A ++YL++ + HRD+ + N ++ E + K+ DFG ++
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 217 I-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 48/292 (16%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK----LEEFINEIVILS 126
+ + + ++G G V A KK K+A+ L K ++E + EI +S
Sbjct: 10 DDYELQEVIGSGATAVV------QAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMS 63
Query: 127 QINHRNVV----------------KLL--GCCLETEVPLLHLHDHHRNEEFPLTWEIRLR 168
Q +H N+V KLL G L+ + H+ ++ L
Sbjct: 64 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI---IKHIVAKGEHKSGVLDESTIAT 120
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 228
I EV L YLH HRD+K+ NILL E ++ADFG S F+A K+
Sbjct: 121 ILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 229 QGTF----GYLEPEYHQSSQLTD-KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 283
+ TF ++ PE + + D K+D++SFG+ +EL TG P + +
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY-----PPMKVLM 232
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ + + + D +++K K +F + CL + +KRPT E+
Sbjct: 233 LTLQNDPPSLETGVQDKEMLKKYGK----SFRKMISLCLQKDPEKRPTAAEL 280
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 92/223 (41%), Gaps = 35/223 (15%)
Query: 73 FNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
F++ R LG+G G VY + + K E+ + E+ I S + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 133 VVKLLGCCLETEVPLLHLHDHHRN----EEFPLTWEIR----------LRIA---TEVAG 175
+++L G + HD R E PL R R A TE+A
Sbjct: 74 ILRLYG----------YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
ALSY HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYL 177
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
PE + +K D++S GV+ E L G P +T QE
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF--EAHTYQET 218
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 30/223 (13%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELLKLEEF 118
E + A ++R LGQG G VY+G+ E +A+K A E + EF
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---EF 62
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLL---------------HLHDHHRNEEF--PL 161
+NE ++ + N +VV+LLG + + L+ L N P
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 162 TWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMD 220
+ +++A E+A ++YL++ + HRD+ + N ++ E + K+ DFG ++ I D
Sbjct: 123 SLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 221 QTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELL 113
++ E + A ++R LGQG G VY+G+ E +A+K A E +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 114 KLEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEE--------------- 158
EF+NE ++ + N +VV+LLG + + L+ + R +
Sbjct: 64 ---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 159 --FPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 216
P + +++A E+A ++YL++ + HRD+ + N ++ E + K+ DFG ++
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 217 I-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 178 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 23/226 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLE----EF 118
+KELD ATN ++++++G G G V G L ++ + K+ +A+ ++ E +F
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLL--------HLHDHHRNEEFPLTWEIRLRIA 170
+ E I+ Q +H N+++L G +++ ++ L R + T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+A + YL + HRD+ + NIL++ KV+DFG S+ + D T G
Sbjct: 154 RGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 231 TFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 128/314 (40%), Gaps = 50/314 (15%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + N+ + LG+G G V + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 161 -------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 213
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DFG
Sbjct: 134 KDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGL 190
Query: 214 SKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTG 272
++ I D +V + ++ PE T +SDV+SFGV+L E IFS G
Sbjct: 191 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLG 243
Query: 273 NTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTM 332
+ V + F +++ D ++ Q M C +RPT
Sbjct: 244 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQRPTF 294
Query: 333 EEVTMELNGIRGSN 346
E+ L + +N
Sbjct: 295 SELVEHLGNLLQAN 308
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 128/314 (40%), Gaps = 50/314 (15%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + N+ + LG+G G V + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 161 -------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 213
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DFG
Sbjct: 134 KDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGL 190
Query: 214 SKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTG 272
++ I D +V + ++ PE T +SDV+SFGV+L E IFS G
Sbjct: 191 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLG 243
Query: 273 NTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTM 332
+ V + F +++ D ++ Q M C +RPT
Sbjct: 244 ASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQRPTF 294
Query: 333 EEVTMELNGIRGSN 346
E+ L + +N
Sbjct: 295 SELVEHLGNLLQAN 308
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 79 LGQGGQGTVYKGMLE--DGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVV 134
LG G G V +G + G+ + AVK K V + +++FI E+ + ++HRN++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMDDFIREVNAMHSLDHRNLI 74
Query: 135 KLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSP 187
+L G L + PL L D R + R A +VA + YL S
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--- 131
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQL 245
HRD+ + N+LL R K+ DFG + + + H + + F + PE ++
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 191
Query: 246 TDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 276
+ SD + FGV L E+ T G++P N SQ
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 222
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 79 LGQGGQGTVYKGMLE--DGRIMAVKKFKLAVDD-EELLKLEEFINEIVILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 136 LLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPI 188
L G L + PL L D R + R A +VA + YL S
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---F 142
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQLT 246
HRD+ + N+LL R K+ DFG + + + H + + F + PE ++ +
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFS 202
Query: 247 DKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 276
SD + FGV L E+ T G++P N SQ
Sbjct: 203 HASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGR----IMAVKKFKLAVDDEELLKLEEF 118
+KELD ATN ++++++G G G V G L+ +A+K K+ +++ +F
Sbjct: 10 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDF 64
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
+ E I+ Q +H N+++L G +++ P++ + ++ N + F + + +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+A + YL HRD+ + NIL++ KV+DFG S+ + D T
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLE----EF 118
+KELD ATN ++++++G G G V G L ++ + K+ +A+ ++ E +F
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
+ E I+ Q +H N+++L G +++ P++ + ++ N + F + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+A + YL HRD+ + NIL++ KV+DFG S+ + D T
Sbjct: 153 LRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELL 113
++ E + A ++R LGQG G VY+G+ E +A+K A E +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 114 KLEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEE--------------- 158
EF+NE ++ + N +VV+LLG + + L+ + R +
Sbjct: 74 ---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 159 --FPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 216
P + +++A E+A ++YL++ + HRD+ + N ++ E + K+ DFG ++
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 217 I-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 79 LGQGGQGTVYKGMLE--DGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVV 134
LG G G V +G + G+ + AVK K V + +++FI E+ + ++HRN++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMDDFIREVNAMHSLDHRNLI 74
Query: 135 KLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSP 187
+L G L + PL L D R + R A +VA + YL S
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--- 131
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQL 245
HRD+ + N+LL R K+ DFG + + + H + + F + PE ++
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 246 TDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 276
+ SD + FGV L E+ T G++P N SQ
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 79 LGQGGQGTVYKGMLE--DGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVV 134
LG G G V +G + G+ + AVK K V + +++FI E+ + ++HRN++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMDDFIREVNAMHSLDHRNLI 74
Query: 135 KLLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSP 187
+L G L + PL L D R + R A +VA + YL S
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--- 131
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQL 245
HRD+ + N+LL R K+ DFG + + + H + + F + PE ++
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 246 TDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 276
+ SD + FGV L E+ T G++P N SQ
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 222
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 37/272 (13%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG+G G V K + G+IMAVK+ + V+ +E +L ++ + + ++ V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL--LMDLDISMRTVDCPFTVTFY 116
Query: 138 GC---------CLE-TEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSP 187
G C+E + L + ++ + +I +IA + AL +LHS S
Sbjct: 117 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 174
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS---- 243
+ HRD+K +N+L++ + K+ DFG S ++ + T G Y+ PE
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 244 QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVV 303
+ KSD++S G+ ++EL + P S G Q+ + ++++
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ----------------LKQVVEEPSP 276
Query: 304 KLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+L F + +CL N K+RPT E+
Sbjct: 277 QLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 308
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGR----IMAVKKFKLAVDDEELLKLEEF 118
+KELD ATN ++++++G G G V G L+ +A+K K+ +++ +F
Sbjct: 27 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDF 81
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
+ E I+ Q +H N+++L G +++ P++ + ++ N + F + + +
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 140
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+A + YL HRD+ + NIL++ KV+DFG S+ + D T
Sbjct: 141 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 244
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 79 LGQGGQGTVYKGMLE--DGRIMAVKKFKLAVDD-EELLKLEEFINEIVILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 136 LLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPI 188
L G L + PL L D R + R A +VA + YL S
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---F 136
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQLT 246
HRD+ + N+LL R K+ DFG + + + H + + F + PE ++ +
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 196
Query: 247 DKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 276
SD + FGV L E+ T G++P N SQ
Sbjct: 197 HASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 226
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 79 LGQGGQGTVYKGMLE--DGRIMAVKKFKLAVDD-EELLKLEEFINEIVILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 136 LLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPI 188
L G L + PL L D R + R A +VA + YL S
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---F 136
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQLT 246
HRD+ + N+LL R K+ DFG + + + H + + F + PE ++ +
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 196
Query: 247 DKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 276
SD + FGV L E+ T G++P N SQ
Sbjct: 197 HASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 226
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 79 LGQGGQGTVYKGMLE--DGRIMAVKKFKLAVDD-EELLKLEEFINEIVILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 136 LLGCCLETEV-------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPI 188
L G L + PL L D R + R A +VA + YL S
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---F 142
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQLT 246
HRD+ + N+LL R K+ DFG + + + H + + F + PE ++ +
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS 202
Query: 247 DKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 276
SD + FGV L E+ T G++P N SQ
Sbjct: 203 HASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 232
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELL 113
++ E + A ++R LGQG G VY+G+ E +A+K A E +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 114 KLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL---------------HLHDHHRNEE 158
EF+NE ++ + N +VV+LLG + + L+ L N
Sbjct: 61 ---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 117
Query: 159 F--PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF 216
P + +++A E+A ++YL++ + HRD+ + N + E + K+ DFG ++
Sbjct: 118 VLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRD 174
Query: 217 I-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 175 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V G +A+K K E + +EFI E ++ ++H +V+L G
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 139 CCLETEVPLLHLHDHHRNEEFPLTW--EIRLRIATE--------VAGALSYLHSAASSPI 188
C + + P+ + ++ N L + E+R R T+ V A+ YL S
Sbjct: 67 VCTK-QRPIFIITEYMANGCL-LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 121
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+ + K
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 249 SDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 276
SD+++FGV++ E+ + GK P F+ T++
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSETAE 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V G +A+K K E + +EFI E ++ ++H +V+L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 139 CCLETEVPLLHLHDHHRNEEFPLTW--EIRLRIATE--------VAGALSYLHSAASSPI 188
C + + P+ + ++ N L + E+R R T+ V A+ YL S
Sbjct: 72 VCTK-QRPIFIITEYMANGCL-LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 126
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+ + K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 249 SDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 276
SD+++FGV++ E+ + GK P F+ T++
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V G +A+K K E + +EFI E ++ ++H +V+L G
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 139 CCLETEVPLLHLHDHHRNEEFPLTW--EIRLRIATE--------VAGALSYLHSAASSPI 188
C + + P+ + ++ N L + E+R R T+ V A+ YL S
Sbjct: 71 VCTK-QRPIFIITEYMANGCL-LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 125
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+ + K
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 249 SDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 276
SD+++FGV++ E+ + GK P F+ T++
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFTNSETAE 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGR----IMAVKKFKLAVDDEELLKLEEF 118
+KELD ATN ++++++G G G V G L+ +A+K K+ +++ +F
Sbjct: 37 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDF 91
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
+ E I+ Q +H N+++L G +++ P++ + ++ N + F + + +
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 150
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+A + YL HRD+ + NIL++ KV+DFG S+ + D T
Sbjct: 151 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 254
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLE----EF 118
+KELD ATN ++++++G G G V G L ++ + K+ +A+ ++ E +F
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
+ E I+ Q +H N+++L G +++ P++ + ++ N + F + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+A + YL HRD+ + NIL++ KV+DFG S+ + D T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V G +A+K K E + +EFI E ++ ++H +V+L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 139 CCLETEVPLLHLHDHHRNEEFPLTW--EIRLRIATE--------VAGALSYLHSAASSPI 188
C + + P+ + ++ N L + E+R R T+ V A+ YL S
Sbjct: 87 VCTK-QRPIFIITEYMANGCL-LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 141
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+ + K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 249 SDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 276
SD+++FGV++ E+ + GK P F+ T++
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLE----EF 118
+KELD ATN ++++++G G G V G L ++ + K+ +A+ ++ E +F
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
+ E I+ Q +H N+++L G +++ P++ + ++ N + F + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+A + YL HRD+ + NIL++ KV+DFG S+ + D T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLE----EF 118
+KELD ATN ++++++G G G V G L ++ + K+ +A+ ++ E +F
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
+ E I+ Q +H N+++L G +++ P++ + ++ N + F + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+A + YL HRD+ + NIL++ KV+DFG S+ + D T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 23/226 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGR----IMAVKKFKLAVDDEELLKLEEF 118
+KELD ATN ++++++G G G V G L+ +A+K K+ +++ +F
Sbjct: 10 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDF 64
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLL--------HLHDHHRNEEFPLTWEIRLRIA 170
+ E I+ Q +H N+++L G +++ ++ L R + T + +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+A + YL HRD+ + NIL++ KV+DFG S+ + D T G
Sbjct: 125 RGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 231 TFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLE----EF 118
+KELD ATN ++++++G G G V G L ++ + K+ +A+ ++ E +F
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
+ E I+ Q +H N+++L G +++ P++ + ++ N + F + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+A + YL HRD+ + NIL++ KV+DFG S+ + D T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V G +A+K K E + +EFI E ++ ++H +V+L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 139 CCLETEVPLLHLHDHHRNEEFPLTW--EIRLRIATE--------VAGALSYLHSAASSPI 188
C + + P+ + ++ N L + E+R R T+ V A+ YL S
Sbjct: 87 VCTK-QRPIFIITEYMANGCL-LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 141
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+ + K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 249 SDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 276
SD+++FGV++ E+ + GK P F+ T++
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V G +A+K K E + +EFI E ++ ++H +V+L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 139 CCLETEVPLLHLHDHHRNEEFPLTW--EIRLRIATE--------VAGALSYLHSAASSPI 188
C + + P+ + ++ N L + E+R R T+ V A+ YL S
Sbjct: 72 VCTK-QRPIFIITEYMANGCL-LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 126
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+ + K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 249 SDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 276
SD+++FGV++ E+ + GK P F+ T++
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V G +A+K K E + +EFI E ++ ++H +V+L G
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-----EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 139 CCLETEVPLLHLHDHHRNEEFPLTW--EIRLRIATE--------VAGALSYLHSAASSPI 188
C + + P+ + ++ N L + E+R R T+ V A+ YL S
Sbjct: 78 VCTK-QRPIFIITEYMANGCL-LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 132
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+ + K
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 249 SDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 276
SD+++FGV++ E+ + GK P F+ T++
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFTNSETAE 223
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 31/281 (11%)
Query: 78 ILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKL 136
++G+G G V K +D GRI+A+KKF L DD++++K + + EI +L Q+ H N+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKF-LESDDDKMVK-KIAMREIKLLKQLRHENLVNL 89
Query: 137 LGCCLETEVPLLHLH--DH---HRNEEFP--LTWEIRLRIATEVAGALSYLHSAASSPIY 189
L C + + L DH E FP L +++ + ++ + + HS I
Sbjct: 90 LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---II 146
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRDIK NIL+ + K+ DFG ++ +A ++ T Y PE K+
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVGDVKYGKA 205
Query: 250 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKK 308
DV++ G ++ E+ G +P+F G++ + + + ++ H + V V+
Sbjct: 206 VDVWAIGCLVTEMFMG-EPLFP-GDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263
Query: 309 NQIM--------------AFANLAERCLDLNGKKRPTMEEV 335
+I +LA++CL ++ KRP E+
Sbjct: 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G+V +G+ + K+ E EE + E I+ Q+++ +V+L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 139 CCLETEVPL---------LHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
C + L LH + EE P++ L +V+ + YL
Sbjct: 404 VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL--LHQVSMGMKYLEEKN---FV 458
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYHQSSQLTD 247
HR++ + N+LL R+ AK++DFG SK + D ++ T + G + + PE + +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
+SDV+S+GV + E L+ G+KP
Sbjct: 519 RSDVWSYGVTMWEALSYGQKP 539
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 23/226 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLE----EF 118
+KELD ATN ++++++G G G V G L ++ + K+ +A+ ++ E +F
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLL--------HLHDHHRNEEFPLTWEIRLRIA 170
+ E I+ Q +H N+++L G +++ ++ L R + T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+A + YL HRD+ + NIL++ KV+DFG S+ + D T G
Sbjct: 154 RGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 231 TFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ +I H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 81 VVSEEPIYIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLE----EF 118
+KELD ATN ++++++G G G V G L ++ + K+ +A+ ++ E +F
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
+ E I+ Q +H N+++L G +++ P++ + ++ N + F + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+A + YL HRD+ + NIL++ KV+DFG ++ + D T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V+KG+ D R V K+ +E ++E+ EI +LSQ + V K G
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 139 CCLETEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHR 191
L+ + L + ++ E PL I E+ L YLHS HR
Sbjct: 93 SYLK-DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHR 148
Query: 192 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDV 251
DIK+ N+LL E K+ADFG + + Q T + GT ++ PE + S K+D+
Sbjct: 149 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADI 207
Query: 252 YSFGVVLVELLTGKKP 267
+S G+ +EL G+ P
Sbjct: 208 WSLGITAIELARGEPP 223
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E +RL +A ++A ++Y+
Sbjct: 71 VVSEEPIXIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN--- 124
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 184
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 185 KSDVWSFGILLTELTTKGRVP 205
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 78 ILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKL 136
+LG+G G VY G L + +A+K+ + + + + EI + + H+N+V+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKE----IPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 137 LGCCLET--------EVPLLHLHDHHRNEEFPLT-WEIRLRIAT-EVAGALSYLHSAASS 186
LG E +VP L R++ PL E + T ++ L YLH +
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---N 127
Query: 187 PIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEY--HQS 242
I HRDIK N+L++ Y K++DFGTSK +A T GT Y+ PE
Sbjct: 128 QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGP 185
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHS 288
+D++S G ++E+ TGK P + G + F VH
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 231
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 68 KATNHFNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
+ + + LG GG G V + + +D G +A+K+ + + + E + EI I+
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---NRERWCLEIQIMK 67
Query: 127 QINHRNVVKL------LGCCLETEVPLLHLH-----------DHHRN----EEFPLTWEI 165
++NH NVV L ++PLL + + N +E P+
Sbjct: 68 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR--- 124
Query: 166 RLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQT 222
+ ++++ AL YLH I HRD+K NI+L +R K+ D G +K +DQ
Sbjct: 125 --TLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQG 177
Query: 223 HVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+ T+ GT YL PE + + T D +SFG + E +TG +P Q
Sbjct: 178 ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 132/318 (41%), Gaps = 65/318 (20%)
Query: 53 SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML-----EDGRI-MAVKKFKLA 106
+ ID +L +++ + N+ + LG G G V + ED + +AVK K
Sbjct: 20 TFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 79
Query: 107 VDDEELLKLEEFINEIVILSQIN-HRNVVKLLGCCLETEVPLLHLHDH------------ 153
+E E ++E+ I+S + H N+V LLG C P+L + ++
Sbjct: 80 AHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRR 135
Query: 154 ------HRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAK 207
+ + PL L +++VA +++L AS HRD+ + N+LL + AK
Sbjct: 136 KAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAK 192
Query: 208 VADFGTSKFIAMDQTH-VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKK 266
+ DFG ++ I D + V + ++ PE T +SDV+S+G++L E
Sbjct: 193 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE------ 246
Query: 267 PIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAER------ 320
IFS G + +++ + KLVK MA A +
Sbjct: 247 -IFSLGLNPYPGI-----------------LVNSKFYKLVKDGYQMAQPAFAPKNIYSIM 288
Query: 321 --CLDLNGKKRPTMEEVT 336
C L RPT +++
Sbjct: 289 QACWALEPTHRPTFQQIC 306
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 78 ILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKL 136
+LG+G G VY G L + +A+K+ + + + + EI + + H+N+V+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKE----IPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 137 LGCCLET--------EVPLLHLHDHHRNEEFPLT-WEIRLRIAT-EVAGALSYLHSAASS 186
LG E +VP L R++ PL E + T ++ L YLH +
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---N 141
Query: 187 PIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEY--HQS 242
I HRDIK N+L++ Y K++DFGTSK +A T GT Y+ PE
Sbjct: 142 QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGP 199
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHS 288
+D++S G ++E+ TGK P + G + F VH
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 68 KATNHFNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
+ + + LG GG G V + + +D G +A+K+ + + + E + EI I+
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---NRERWCLEIQIMK 68
Query: 127 QINHRNVVKL------LGCCLETEVPLLHLH-----------DHHRN----EEFPLTWEI 165
++NH NVV L ++PLL + + N +E P+
Sbjct: 69 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR--- 125
Query: 166 RLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQT 222
+ ++++ AL YLH I HRD+K NI+L +R K+ D G +K +DQ
Sbjct: 126 --TLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQG 178
Query: 223 HVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+ T+ GT YL PE + + T D +SFG + E +TG +P Q
Sbjct: 179 ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V+KG+ D R V K+ +E ++E+ EI +LSQ + V K G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 139 CCLETEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHR 191
L+ + L + ++ E PL I E+ L YLHS HR
Sbjct: 73 SYLK-DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHR 128
Query: 192 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDV 251
DIK+ N+LL E K+ADFG + + Q T + GT ++ PE + S K+D+
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADI 187
Query: 252 YSFGVVLVELLTGKKP 267
+S G+ +EL G+ P
Sbjct: 188 WSLGITAIELARGEPP 203
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 113/229 (49%), Gaps = 27/229 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
+KE+D ++ + ++G G G V +G L+ G+ +A+K K + + EF
Sbjct: 8 AKEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR---REF 62
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRL--------RIA 170
++E I+ Q H N+++L G + +P++ L + N L +RL ++
Sbjct: 63 LSEASIMGQFEHPNIIRLEGV-VTNSMPVMILTEFMENGA--LDSFLRLNDGQFTVIQLV 119
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTK 227
+ G S + A HRD+ + NIL++ KV+DFG S+F+ + D T+ T+
Sbjct: 120 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY-TSS 178
Query: 228 IQGTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ G + PE + T SD +S+G+V+ E+++ G++P + N
Sbjct: 179 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 132/318 (41%), Gaps = 65/318 (20%)
Query: 53 SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML-----EDGRI-MAVKKFKLA 106
+ ID +L +++ + N+ + LG G G V + ED + +AVK K
Sbjct: 28 TFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 107 VDDEELLKLEEFINEIVILSQIN-HRNVVKLLGCCLETEVPLLHLHDH------------ 153
+E E ++E+ I+S + H N+V LLG C P+L + ++
Sbjct: 88 AHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRR 143
Query: 154 ------HRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAK 207
+ + PL L +++VA +++L AS HRD+ + N+LL + AK
Sbjct: 144 KAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAK 200
Query: 208 VADFGTSKFIAMDQTH-VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKK 266
+ DFG ++ I D + V + ++ PE T +SDV+S+G++L E
Sbjct: 201 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE------ 254
Query: 267 PIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAER------ 320
IFS G + +++ + KLVK MA A +
Sbjct: 255 -IFSLGLNPYPGI-----------------LVNSKFYKLVKDGYQMAQPAFAPKNIYSIM 296
Query: 321 --CLDLNGKKRPTMEEVT 336
C L RPT +++
Sbjct: 297 QACWALEPTHRPTFQQIC 314
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 127/317 (40%), Gaps = 53/317 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + N+ + LG+G G V + R +AVK K E
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 78 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 134
Query: 161 ----------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVAD 210
LT E + + +VA + +L AS HRD+ + NILL E+ K+ D
Sbjct: 135 KTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 211 FGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
FG ++ I D V + ++ PE T +SDV+SFGV+L E IF
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IF 244
Query: 270 STGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKR 329
S G + V + F +++ D ++ Q M C +R
Sbjct: 245 SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQR 295
Query: 330 PTMEEVTMELNGIRGSN 346
PT E+ L + +N
Sbjct: 296 PTFSELVEHLGNLLQAN 312
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 112/227 (49%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLE----EF 118
+KELD ATN ++++++G G G V G L ++ + K+ +A+ ++ E +F
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
+ E I+ Q +H N+++L G +++ P++ + ++ N + F + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+A + YL HRD+ + NIL++ KV+DFG + + D T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 81 VVSEEPIYIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 133/323 (41%), Gaps = 69/323 (21%)
Query: 53 SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML-----EDGRI-MAVKKFKLA 106
+ ID +L +++ + N+ + LG G G V + ED + +AVK K
Sbjct: 28 TFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 107 VDDEELLKLEEFINEIVILSQIN-HRNVVKLLGCC---------------------LETE 144
+E E ++E+ I+S + H N+V LLG C L +
Sbjct: 88 AHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK 144
Query: 145 VP--LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDE 202
P L + ++ N E L+ L +++VA +++L AS HRD+ + N+LL
Sbjct: 145 RPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN 201
Query: 203 RYRAKVADFGTSKFIAMDQTH-VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVEL 261
+ AK+ DFG ++ I D + V + ++ PE T +SDV+S+G++L E
Sbjct: 202 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE- 260
Query: 262 LTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAER- 320
IFS G + +++ + KLVK MA A +
Sbjct: 261 ------IFSLGLNPYPGI-----------------LVNSKFYKLVKDGYQMAQPAFAPKN 297
Query: 321 -------CLDLNGKKRPTMEEVT 336
C L RPT +++
Sbjct: 298 IYSIMQACWALEPTHRPTFQQIC 320
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V + GR +AVK L + + E NE+VI+ H NVV++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDL----RKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 138 GCCLETEVPLLHLHDHHRNEEFPLTWEIRL---RIAT---EVAGALSYLHSAASSPIYHR 191
L E + + + ++RL +IAT V AL+YLH+ + HR
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHR 165
Query: 192 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDV 251
DIKS +ILL R K++DFG I+ D + GT ++ PE S + D+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEVDI 224
Query: 252 YSFGVVLVELLTGKKPIFS 270
+S G++++E++ G+ P FS
Sbjct: 225 WSLGIMVIEMVDGEPPYFS 243
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 25/266 (9%)
Query: 79 LGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V+K G +MA K L + + + I E+ +L + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 138 GCCL---ETEVPLLHLH----DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G E + + H+ D + + +I +++ V L+YL I H
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 128
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD+K +NIL++ R K+ DFG S + + GT Y+ PE Q + + +SD
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 251 VYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYD-ILDDQVVKLVKKN 309
++S G+ LVE+ G+ PI +A F + D I+++ KL
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF--------ELLDYIVNEPPPKLPSGV 237
Query: 310 QIMAFANLAERCLDLNGKKRPTMEEV 335
+ F + +CL N +R ++++
Sbjct: 238 FSLEFQDFVNKCLIKNPAERADLKQL 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 69
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 70 VVSEEPIYIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 123
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 184 KSDVWSFGILLTELTTKGRVP 204
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 34/265 (12%)
Query: 79 LGQGGQGTVYKGMLEDGR-IMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYKG+ + ++A+K L ++E+ +++ EI +LSQ + + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYITRYF 83
Query: 138 GCCLETEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G L++ L + ++ + PL I E+ L YLHS H
Sbjct: 84 GSYLKS-TKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK---IH 139
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RDIK+ N+LL E+ K+ADFG + + Q + GT ++ PE + S K+D
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKAD 198
Query: 251 VYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQ 310
++S G+ +EL G+ P N L H MR + ++ ++
Sbjct: 199 IWSLGITAIELAKGEPP----------NSDL-----HPMR---VLFLIPKNSPPTLEGQH 240
Query: 311 IMAFANLAERCLDLNGKKRPTMEEV 335
F E CL+ + + RPT +E+
Sbjct: 241 SKPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 72 VVSEEPIYIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 125
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 186 KSDVWSFGILLTELTTKGRVP 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 81 VVSEEPIYIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 81 VVSEEPIYIVCEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 81 VVSEEPIYIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 95 GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLGCCLETE---------- 144
G +AVK K + L++ EI IL + H N+VK G C E
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 94
Query: 145 VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERY 204
+P L ++ + + + +L+ A ++ + YL S HRD+ + N+L++ +
Sbjct: 95 LPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEH 151
Query: 205 RAKVADFGTSKFIAMDQTHVTTK---IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVEL 261
+ K+ DFG +K I D+ T K F Y PE S+ SDV+SFGV L EL
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHEL 210
Query: 262 LT 263
LT
Sbjct: 211 LT 212
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 45/279 (16%)
Query: 77 RILGQGGQGTVYKGMLED--GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVV 134
+ +G+G G V ML D G +AVK K +D + F+ E +++Q+ H N+V
Sbjct: 199 QTIGKGEFGDV---MLGDYRGNKVAVKCIK---NDA---TAQAFLAEASVMTQLRHSNLV 249
Query: 135 KLLGCCLETEVPLL---------HLHDHHRNE-EFPLTWEIRLRIATEVAGALSYLHSAA 184
+LLG +E + L L D+ R+ L + L+ + +V A+ YL
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG-- 307
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
+ HRD+ + N+L+ E AKV+DFG +K + Q ++ T PE + +
Sbjct: 308 -NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKK 362
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSDV+SFG++L E I+S G + L V + K + D D
Sbjct: 363 FSTKSDVWSFGILLWE-------IYSFGRVPYPRIPLKD-VVPRVEKGYKMDAPD----- 409
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIR 343
A ++ + C L+ RPT ++ +L IR
Sbjct: 410 ----GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E +RL +A ++A ++Y+
Sbjct: 247 VVSEEPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN--- 300
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E +RL +A ++A ++Y+
Sbjct: 247 VVSEEPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN--- 300
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
+KE+D + + +++G G G V G L+ G+ +A+K K D++ +F
Sbjct: 23 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDF 77
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIAT---- 171
++E I+ Q +H N++ L G + + P++ + ++ N + F + R +
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 136
Query: 172 --EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+ + YL ++ HRD+ + NIL++ KV+DFG S+ + D T
Sbjct: 137 LRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 73
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E +RL +A ++A ++Y+
Sbjct: 74 VVSEEPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN--- 127
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 188 KSDVWSFGILLTELTTKGRVP 208
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 95 GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLGCCLETE---------- 144
G +AVK K + L++ EI IL + H N+VK G C E
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 106
Query: 145 VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERY 204
+P L ++ + + + +L+ A ++ + YL S HRD+ + N+L++ +
Sbjct: 107 LPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEH 163
Query: 205 RAKVADFGTSKFIAMDQTHVTTK---IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVEL 261
+ K+ DFG +K I D+ T K F Y PE S+ SDV+SFGV L EL
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHEL 222
Query: 262 LT 263
LT
Sbjct: 223 LT 224
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E +RL +A ++A ++Y+
Sbjct: 247 VVSEEPIYIVGEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN--- 300
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 127/318 (39%), Gaps = 54/318 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 68 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 161 -----------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVA 209
LT E + + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 210 DFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
DFG ++ I D +V + ++ PE T +SDV+SFGV+L E I
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------I 234
Query: 269 FSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKK 328
FS G + V + F +++ D ++ Q M C +
Sbjct: 235 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQ 285
Query: 329 RPTMEEVTMELNGIRGSN 346
RPT E+ L + +N
Sbjct: 286 RPTFSELVEHLGNLLQAN 303
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEVPLLH-------LHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 81 VVSEEPIYIVMEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 19/224 (8%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
+KE+D + + +++G G G V G L+ G+ +A+K K D++ +F
Sbjct: 8 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDF 62
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIATEVA- 174
++E I+ Q +H N++ L G + + P++ + ++ N + F + R + V
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 121
Query: 175 --GALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
G S + + HRD+ + NIL++ KV+DFG S+ + D T G
Sbjct: 122 LRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 181
Query: 233 G--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ PE + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 182 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEVPLLH-------LHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 81 VVSEEPIYIVTEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 127/318 (39%), Gaps = 54/318 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 68 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 161 -----------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVA 209
LT E + + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 210 DFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
DFG ++ I D +V + ++ PE T +SDV+SFGV+L E I
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------I 234
Query: 269 FSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKK 328
FS G + V + F +++ D ++ Q M C +
Sbjct: 235 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQ 285
Query: 329 RPTMEEVTMELNGIRGSN 346
RPT E+ L + +N
Sbjct: 286 RPTFSELVEHLGNLLQAN 303
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 31/266 (11%)
Query: 79 LGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V+K G +MA K L + + I E+ +L + N +V
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 89
Query: 138 GCCL---ETEVPLLHLH----DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G E + + H+ D + + +I +++ V L+YL I H
Sbjct: 90 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 147
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD+K +NIL++ R K+ DFG S + + GT Y+ PE Q + + +SD
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSD 204
Query: 251 VYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYD-ILDDQVVKLVKKN 309
++S G+ LVE+ G+ PI S S+A F + D I+++ KL
Sbjct: 205 IWSMGLSLVEMAVGRYPIGSGSG------SMAIF--------ELLDYIVNEPPPKLPSGV 250
Query: 310 QIMAFANLAERCLDLNGKKRPTMEEV 335
+ F + +CL N +R ++++
Sbjct: 251 FSLEFQDFVNKCLIKNPAERADLKQL 276
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLED-GRIMAVK---KFKLAVDDEELLKLEEFINEIVILS 126
N F+V+RI+G+GG G VY D G++ A+K K ++ + E L L NE ++LS
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL----NERIMLS 244
Query: 127 QINHRNVVKLLGCCLETEVP--------LLHLHD-HHRNEEFPLTWEIRLRI-ATEVAGA 176
++ + ++ P L++ D H+ + + E +R A E+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
L ++H+ + +RD+K NILLDE +++D G + + + H + GT GY+
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 358
Query: 237 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPI 268
PE Q D S D +S G +L +LL G P
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +A+K K + E F+ E I+ ++ H +V+L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT-----MSPESFLEEAQIMKKLKHDKLVQLYA 71
Query: 139 CCLETEVPLL-------HLHDHHRNEEF-PLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
E + ++ L D ++ E L + +A +VA ++Y+ H
Sbjct: 72 VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIH 128
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD++S NIL+ K+ADFG ++ I ++ + + PE + T KSD
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 251 VYSFGVVLVELLT-GKKPIFSTGN 273
V+SFG++L EL+T G+ P N
Sbjct: 189 VWSFGILLTELVTKGRVPYPGMNN 212
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 19/224 (8%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
+KE+D + + +++G G G V G L+ G+ +A+K K D++ +F
Sbjct: 2 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDF 56
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEFPLTWEIRLRIATEVA- 174
++E I+ Q +H N++ L G + + P++ + ++ N + F + R + V
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 115
Query: 175 --GALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
G S + + HRD+ + NIL++ KV+DFG S+ + D T G
Sbjct: 116 LRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 175
Query: 233 G--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ PE + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 176 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLED-GRIMAVK---KFKLAVDDEELLKLEEFINEIVILS 126
N F+V+RI+G+GG G VY D G++ A+K K ++ + E L L NE ++LS
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL----NERIMLS 244
Query: 127 QINHRNVVKLLGCCLETEVP-----LLHLHD----HHRNEEFPLTWEIRLRI-ATEVAGA 176
++ + ++ P +L L + H+ + + E +R A E+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
L ++H+ + +RD+K NILLDE +++D G + + + H + GT GY+
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 358
Query: 237 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPI 268
PE Q D S D +S G +L +LL G P
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLED-GRIMAVK---KFKLAVDDEELLKLEEFINEIVILS 126
N F+V+RI+G+GG G VY D G++ A+K K ++ + E L L NE ++LS
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL----NERIMLS 244
Query: 127 QINHRNVVKLLGCCLETEVP-----LLHLHD----HHRNEEFPLTWEIRLRI-ATEVAGA 176
++ + ++ P +L L + H+ + + E +R A E+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
L ++H+ + +RD+K NILLDE +++D G + + + H + GT GY+
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 358
Query: 237 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPI 268
PE Q D S D +S G +L +LL G P
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLED-GRIMAVK---KFKLAVDDEELLKLEEFINEIVILS 126
N F+V+RI+G+GG G VY D G++ A+K K ++ + E L L NE ++LS
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL----NERIMLS 243
Query: 127 QINHRNVVKLLGCCLETEVP--------LLHLHD-HHRNEEFPLTWEIRLRI-ATEVAGA 176
++ + ++ P L++ D H+ + + E +R A E+
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
L ++H+ + +RD+K NILLDE +++D G + + + H + GT GY+
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 357
Query: 237 PEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPI 268
PE Q D S D +S G +L +LL G P
Sbjct: 358 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 27/229 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
+KE+D ++ + ++G G G V +G L+ G+ +A+K K + + EF
Sbjct: 10 AKEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR---REF 64
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRL--------RIA 170
++E I+ Q H N+++L G + +P++ L + N L +RL ++
Sbjct: 65 LSEASIMGQFEHPNIIRLEGV-VTNSMPVMILTEFMENGA--LDSFLRLNDGQFTVIQLV 121
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTK 227
+ G S + A HRD+ + NIL++ KV+DFG S+F+ + D T T+
Sbjct: 122 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE-TSS 180
Query: 228 IQGTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ G + PE + T SD +S+G+V+ E+++ G++P + N
Sbjct: 181 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 76 NRILGQGGQGTVYKG---MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
++ LG G GTV KG M + + +AVK K +D L +E + E ++ Q+++
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 67
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR----------LRIATEVAGALSYLHS 182
+V+++G C E E +L + E PL ++ + + +V+ + YL
Sbjct: 68 IVRMIGIC-EAESWMLVME---MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 123
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYH 240
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 124 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + KSDV+SFGV++ E + G+KP
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 76 NRILGQGGQGTVYKG---MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
++ LG G GTV KG M + + +AVK K +D L +E + E ++ Q+++
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 69
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR----------LRIATEVAGALSYLHS 182
+V+++G C E E +L + E PL ++ + + +V+ + YL
Sbjct: 70 IVRMIGIC-EAESWMLVME---MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 125
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYH 240
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 126 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + KSDV+SFGV++ E + G+KP
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 56/235 (23%)
Query: 78 ILGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKL 136
+LGQG G V K D R A+KK + EE KL ++E+++L+ +NH+ VV+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR---HTEE--KLSTILSEVMLLASLNHQYVVRY 67
Query: 137 LGCCLETE---VPLLH----------------------LHDHHRNEEFPLTWEIRLRIAT 171
LE P+ +H + N++ W R+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFR 123
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK-------FIAMDQTHV 224
++ ALSY+HS I HRD+K NI +DE K+ DFG +K + +D ++
Sbjct: 124 QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 225 T------TKIQGTFGYLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTG 272
T GT Y+ E + +K D+YS G++ E++ FSTG
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP----FSTG 231
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 56/235 (23%)
Query: 78 ILGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKL 136
+LGQG G V K D R A+KK + EE KL ++E+++L+ +NH+ VV+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR---HTEE--KLSTILSEVMLLASLNHQYVVRY 67
Query: 137 LGCCLE-----------------------TEVPLLH--LHDHHRNEEFPLTWEIRLRIAT 171
LE E L+ +H + N++ W R+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFR 123
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK-------FIAMDQTHV 224
++ ALSY+HS I HRD+K NI +DE K+ DFG +K + +D ++
Sbjct: 124 QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 225 T------TKIQGTFGYLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTG 272
T GT Y+ E + +K D+YS G++ E++ FSTG
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP----FSTG 231
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 27/229 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
+KE+D + + +++G G G V G L+ G+ +A+K K +++ +F
Sbjct: 27 AKEIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR---RDF 81
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLL---------HLHDHHRNEEFPLTWEIRLRI 169
++E I+ Q +H NV+ L G ++ P++ L R + T + +
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKS-TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 140
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTK 227
+A + YL A HRD+ + NIL++ KV+DFG S+F+ D + T+
Sbjct: 141 LRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 228 IQGTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ G + PE Q + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 198 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 76 NRILGQGGQGTVYKG---MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
++ LG G GTV KG M + + +AVK K +D L +E + E ++ Q+++
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 73
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR----------LRIATEVAGALSYLHS 182
+V+++G C E E +L + E PL ++ + + +V+ + YL
Sbjct: 74 IVRMIGIC-EAESWMLVME---MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 129
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYH 240
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 130 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 186
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + KSDV+SFGV++ E + G+KP
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 81 VVSEEPIYIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+ + NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 76 NRILGQGGQGTVYKG---MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
++ LG G GTV KG M + + +AVK K +D L +E + E ++ Q+++
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 79
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR----------LRIATEVAGALSYLHS 182
+V+++G C E E +L + E PL ++ + + +V+ + YL
Sbjct: 80 IVRMIGIC-EAESWMLVME---MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 135
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYH 240
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 136 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + KSDV+SFGV++ E + G+KP
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 127/318 (39%), Gaps = 54/318 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 161 -----------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVA 209
LT E + + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 210 DFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
DFG ++ I D +V + ++ PE T +SDV+SFGV+L E I
Sbjct: 191 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------I 243
Query: 269 FSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKK 328
FS G + V + F +++ D ++ Q M C +
Sbjct: 244 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQ 294
Query: 329 RPTMEEVTMELNGIRGSN 346
RPT E+ L + +N
Sbjct: 295 RPTFSELVEHLGNLLQAN 312
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 126/316 (39%), Gaps = 52/316 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 79 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 135
Query: 161 ---------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADF 211
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DF
Sbjct: 136 KPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDF 192
Query: 212 GTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
G ++ I D V + ++ PE T +SDV+SFGV+L E IFS
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFS 245
Query: 271 TGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRP 330
G + V + F +++ D ++ Q M C +RP
Sbjct: 246 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQRP 296
Query: 331 TMEEVTMELNGIRGSN 346
T E+ L + +N
Sbjct: 297 TFSELVEHLGNLLQAN 312
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 126/318 (39%), Gaps = 54/318 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 68 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 161 -----------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVA 209
LT E + + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 210 DFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
DFG ++ I D V + ++ PE T +SDV+SFGV+L E I
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------I 234
Query: 269 FSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKK 328
FS G + V + F +++ D ++ Q M C +
Sbjct: 235 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQ 285
Query: 329 RPTMEEVTMELNGIRGSN 346
RPT E+ L + +N
Sbjct: 286 RPTFSELVEHLGNLLQAN 303
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 72 HFNVNRILGQGGQGTVYKG-MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
+F + + +G+G VY+ L DG +A+KK ++ D + + I EI +L Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQI-FDLMDAKARADCIKEIDLLKQLNH 91
Query: 131 RNVVKLLGCCLE-TEVPL-LHLHD---------HHRNEEFPLTWEIRLRIATEVAGALSY 179
NV+K +E E+ + L L D H + ++ + + ++ AL +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 180 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEY 239
+HS + HRDIK N+ + K+ D G +F + +T + GT Y+ PE
Sbjct: 152 MHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPER 207
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
+ KSD++S G +L E+ + P +
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFY 237
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 76 NRILGQGGQGTVYKG---MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
++ LG G GTV KG M + + +AVK K +D L +E + E ++ Q+++
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 89
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR----------LRIATEVAGALSYLHS 182
+V+++G C E E +L + E PL ++ + + +V+ + YL
Sbjct: 90 IVRMIGIC-EAESWMLVME---MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 145
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYH 240
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 146 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + KSDV+SFGV++ E + G+KP
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 76 NRILGQGGQGTVYKG---MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
++ LG G GTV KG M + + +AVK K +D L +E + E ++ Q+++
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 89
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR----------LRIATEVAGALSYLHS 182
+V+++G C E E +L + E PL ++ + + +V+ + YL
Sbjct: 90 IVRMIGIC-EAESWMLVME---MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 145
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYH 240
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 146 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + KSDV+SFGV++ E + G+KP
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E +RL ++ ++A ++Y+
Sbjct: 78 VVSEEPIYIVTEYMNKGSLLDFLKGETGKY---LRLPQLVDMSAQIASGMAYVERMN--- 131
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 192 KSDVWSFGILLTELTTKGRVP 212
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 127/318 (39%), Gaps = 54/318 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 114 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 170
Query: 161 -----------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVA 209
LT E + + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 171 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 227
Query: 210 DFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
DFG ++ I D +V + ++ PE T +SDV+SFGV+L E I
Sbjct: 228 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------I 280
Query: 269 FSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKK 328
FS G + V + F +++ D ++ Q M C +
Sbjct: 281 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQ 331
Query: 329 RPTMEEVTMELNGIRGSN 346
RPT E+ L + +N
Sbjct: 332 RPTFSELVEHLGNLLQAN 349
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 76 NRILGQGGQGTVYKG---MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
++ LG G GTV KG M + + +AVK K +D L +E + E ++ Q+++
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 87
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR----------LRIATEVAGALSYLHS 182
+V+++G C E E +L + E PL ++ + + +V+ + YL
Sbjct: 88 IVRMIGIC-EAESWMLVME---MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 143
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYH 240
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 144 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + KSDV+SFGV++ E + G+KP
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E +RL +A ++A ++Y+
Sbjct: 330 VVSEEPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVERMN--- 383
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 444 KSDVWSFGILLTELTTKGRVP 464
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V+KG+ D R V K+ +E ++E+ EI +LSQ + V K G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 139 CCLETEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHR 191
L+ + L + ++ E PL I E+ L YLHS HR
Sbjct: 73 SYLK-DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHR 128
Query: 192 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDV 251
DIK+ N+LL E K+ADFG + + Q + GT ++ PE + S K+D+
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADI 187
Query: 252 YSFGVVLVELLTGKKP 267
+S G+ +EL G+ P
Sbjct: 188 WSLGITAIELARGEPP 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 119/305 (39%), Gaps = 57/305 (18%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMLED---GRIMAVKKFKLAVDDEELLKLE 116
+F E + + + R LGQG G VY+G D G K + L +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 117 EFINEIVILSQINHRNVVKLLGCCLETEVPL--LHLHDHHRNEEF--------------- 159
EF+NE ++ +VV+LLG + + L + L H + +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 160 PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA- 218
P T + +++A E+A ++YL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 219 MDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
D K ++ PE + T SD++SFGVVL E
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE------------------ 224
Query: 279 VSLAAFFVHSMRKNHMYDILDDQVVKLV--------KKNQIMAFANLAERCLDLNGKKRP 330
+ S+ + + ++QV+K V N +L C N K RP
Sbjct: 225 -------ITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRP 277
Query: 331 TMEEV 335
T E+
Sbjct: 278 TFLEI 282
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 127/318 (39%), Gaps = 54/318 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 79 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 135
Query: 161 -----------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVA 209
LT E + + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 136 KEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 192
Query: 210 DFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
DFG ++ I D +V + ++ PE T +SDV+SFGV+L E I
Sbjct: 193 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------I 245
Query: 269 FSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKK 328
FS G + V + F +++ D ++ Q M C +
Sbjct: 246 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQ 296
Query: 329 RPTMEEVTMELNGIRGSN 346
RPT E+ L + +N
Sbjct: 297 RPTFSELVEHLGNLLQAN 314
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 119/305 (39%), Gaps = 57/305 (18%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMLED---GRIMAVKKFKLAVDDEELLKLE 116
+F E + + + R LGQG G VY+G D G K + L +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 117 EFINEIVILSQINHRNVVKLLGCCLETEVPL--LHLHDHHRNEEF--------------- 159
EF+NE ++ +VV+LLG + + L + L H + +
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 160 PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA- 218
P T + +++A E+A ++YL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 219 MDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
D K ++ PE + T SD++SFGVVL E
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE------------------ 221
Query: 279 VSLAAFFVHSMRKNHMYDILDDQVVKLV--------KKNQIMAFANLAERCLDLNGKKRP 330
+ S+ + + ++QV+K V N +L C N K RP
Sbjct: 222 -------ITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRP 274
Query: 331 TMEEV 335
T E+
Sbjct: 275 TFLEI 279
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGML-EDGRIMAVKKFKLAV---DDEELLKLEEFINEIVI 124
++F R+LG+G G V + E G + AVK K V DD+ +E + E I
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDD----VECTMTEKRI 76
Query: 125 LSQINHRNVVKLLGCCLETEVPLL-------------HLHDHHRNEEFPLTWEIRLRI-A 170
LS + + L CC +T L H+ R +E R R A
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE------ARARFYA 130
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL +LH I +RD+K N+LLD K+ADFG K + T G
Sbjct: 131 AEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCG 186
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
T Y+ PE Q D ++ GV+L E+L G P
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V+KG+ D R V K+ +E ++E+ EI +LSQ + V K G
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 139 CCLETEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHR 191
L+ + L + ++ E PL I E+ L YLHS HR
Sbjct: 88 SYLK-DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHR 143
Query: 192 DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDV 251
DIK+ N+LL E K+ADFG + + Q + GT ++ PE + S K+D+
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADI 202
Query: 252 YSFGVVLVELLTGKKP 267
+S G+ +EL G+ P
Sbjct: 203 WSLGITAIELARGEPP 218
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E +RL ++ ++A ++Y+
Sbjct: 78 VVSEEPIYIVTEYMNKGSLLDFLKGETGKY---LRLPQLVDMSAQIASGMAYVERMN--- 131
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 192 KSDVWSFGILLTELTTKGRVP 212
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 126/318 (39%), Gaps = 54/318 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 68 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 124
Query: 161 -----------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVA 209
LT E + + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 210 DFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
DFG ++ I D V + ++ PE T +SDV+SFGV+L E I
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------I 234
Query: 269 FSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKK 328
FS G + V + F +++ D ++ Q M C +
Sbjct: 235 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQ 285
Query: 329 RPTMEEVTMELNGIRGSN 346
RPT E+ L + +N
Sbjct: 286 RPTFSELVEHLGNLLQAN 303
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 76 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 130
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K + E F+ E ++ ++ H +V+L
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGN-----MSPEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 139 CCLETEVPLL-------HLHDHHRNEEFPLTWEIRLR----IATEVAGALSYLHSAASSP 187
E + ++ L D + E + +RL +A ++A ++Y+
Sbjct: 248 VVSEEPIYIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMN--- 301
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
HRD+++ NIL+ E KVADFG + I ++ + + PE + T
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 248 KSDVYSFGVVLVELLT-GKKP 267
KSDV+SFG++L EL T G+ P
Sbjct: 362 KSDVWSFGILLTELTTKGRVP 382
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 76
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 77 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 131
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 192 SDVWSFGILLTEIVTHGRIP 211
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
++E++ + H + +I+G G G V G L G+ +A+K K + + +F
Sbjct: 43 TREIEASRIH--IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR---RDF 97
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLL--------HLHDHHRNEEFPLTWEIRLRIA 170
++E I+ Q +H N+++L G + ++ L R + T + +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
V + YL HRD+ + N+L+D KV+DFG S+ + D T G
Sbjct: 158 RGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGG 214
Query: 231 TFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ PE + SDV+SFGVV+ E+L G++P ++ N
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 126/318 (39%), Gaps = 54/318 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 161 -----------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVA 209
LT E + + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 210 DFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
DFG ++ I D V + ++ PE T +SDV+SFGV+L E I
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------I 243
Query: 269 FSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKK 328
FS G + V + F +++ D ++ Q M C +
Sbjct: 244 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQ 294
Query: 329 RPTMEEVTMELNGIRGSN 346
RPT E+ L + +N
Sbjct: 295 RPTFSELVEHLGNLLQAN 312
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 25/208 (12%)
Query: 76 NRILGQGGQGTVYKG---MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
++ LG G GTV KG M + + +AVK K +D L +E + E ++ Q+++
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 73
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR----------LRIATEVAGALSYLHS 182
+V+++G C E E +L + E PL ++ + + +V+ + YL
Sbjct: 74 IVRMIGIC-EAESWMLVME---MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 129
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYH 240
S HRD+ + N+LL ++ AK++DFG SK + D+ + G + + PE
Sbjct: 130 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + KSDV+SFGV++ E + G+KP
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 77
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 78 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 132
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 193 SDVWSFGILLTEIVTHGRIP 212
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
++E++ + H + +I+G G G V G L G+ +A+K K + + +F
Sbjct: 43 TREIEASRIH--IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR---RDF 97
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLL--------HLHDHHRNEEFPLTWEIRLRIA 170
++E I+ Q +H N+++L G + ++ L R + T + +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA--MDQTHVTTKI 228
V + YL HRD+ + N+L+D KV+DFG S+ + D + TT
Sbjct: 158 RGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGG 214
Query: 229 QGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ + PE + SDV+SFGVV+ E+L G++P ++ N
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 42/213 (19%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G VYK ++ ++A K +D + +LE+++ EI IL+ +H N+VKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAK---VIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 139 C-------------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAAS 185
C V + L E PLT + + AL+YLH
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLH---D 153
Query: 186 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ------GTFGYLEPEY 239
+ I HRD+K+ NIL K+ADFG S T IQ GT ++ PE
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRXIQRRDSFIGTPYWMAPEV 206
Query: 240 HQSSQLTD-----KSDVYSFGVVLVELLTGKKP 267
D K+DV+S G+ L+E+ + P
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + + F+ E ++ Q+ H+ +V+L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-----QGSMSPDAFLAEANLMKQLQHQRLVRLYA 70
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 71 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 125
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 186 SDVWSFGILLTEIVTHGRIP 205
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 42/213 (19%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G VYK ++ ++A K +D + +LE+++ EI IL+ +H N+VKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAK---VIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 139 C-------------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAAS 185
C V + L E PLT + + AL+YLH
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLH---D 153
Query: 186 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ------GTFGYLEPEY 239
+ I HRD+K+ NIL K+ADFG S T IQ GT ++ PE
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRXIQRRDXFIGTPYWMAPEV 206
Query: 240 HQSSQLTD-----KSDVYSFGVVLVELLTGKKP 267
D K+DV+S G+ L+E+ + P
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 42/213 (19%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G VYK ++ ++A K +D + +LE+++ EI IL+ +H N+VKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAK---VIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 139 C-------------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAAS 185
C V + L E PLT + + AL+YLH
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLH---D 153
Query: 186 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ------GTFGYLEPEY 239
+ I HRD+K+ NIL K+ADFG S T IQ GT ++ PE
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRTIQRRDSFIGTPYWMAPEV 206
Query: 240 HQSSQLTD-----KSDVYSFGVVLVELLTGKKP 267
D K+DV+S G+ L+E+ + P
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 84
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 85 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 139
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 200 SDVWSFGILLTEIVTHGRIP 219
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 126/318 (39%), Gaps = 54/318 (16%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLLHLHD------------HHRNEEFP- 160
L ++E+ IL I H NVV LLG C + PL+ + + RNE P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 161 -----------LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVA 209
LT E + + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 210 DFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
DFG ++ I D V + ++ PE T +SDV+SFGV+L E I
Sbjct: 191 DFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------I 243
Query: 269 FSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKK 328
FS G + V + F +++ D ++ Q M C +
Sbjct: 244 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQ 294
Query: 329 RPTMEEVTMELNGIRGSN 346
RPT E+ L + +N
Sbjct: 295 RPTFSELVEHLGNLLQAN 312
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 76 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 130
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 76 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 130
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 82 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 136
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 197 SDVWSFGILLTEIVTHGRIP 216
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 76 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 130
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I + + + PE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 83
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 84 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 138
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 199 SDVWSFGILLTEIVTHGRIP 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 79 LGQGGQGTVYKGML-EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V + G+++AVKK L + + E NE+VI+ H NVV++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDL----RKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 138 GCCLETEV-----------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
L + L + H R E E + V ALS LH+
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG-- 136
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQ 244
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 137 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D++S G++++E++ G+ P F+
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFN 218
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 119/305 (39%), Gaps = 57/305 (18%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMLED---GRIMAVKKFKLAVDDEELLKLE 116
+F E + + + R LGQG G VY+G D G K + L +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 117 EFINEIVILSQINHRNVVKLLGCCLETEVPL--LHLHDHHRNEEF--------------- 159
EF+NE ++ +VV+LLG + + L + L H + +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 160 PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-A 218
P T + +++A E+A ++YL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 219 MDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
D K ++ PE + T SD++SFGVVL E
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE------------------ 224
Query: 279 VSLAAFFVHSMRKNHMYDILDDQVVKLV--------KKNQIMAFANLAERCLDLNGKKRP 330
+ S+ + + ++QV+K V N +L C N K RP
Sbjct: 225 -------ITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRP 277
Query: 331 TMEEV 335
T E+
Sbjct: 278 TFLEI 282
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 80
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 81 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 135
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 196 SDVWSFGILLTEIVTHGRIP 215
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 143
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 144 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 197
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 243
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 244 ---------EHDEEIIGGQV--FFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 143
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 144 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 197
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 243
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 244 ---------EHDEEIIGGQV--FFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 79 LGQGGQGTVYKGML-EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V + G+++AVKK L + + E NE+VI+ H NVV++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDL----RKQQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 138 GCCLETEV-----------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
L + L + H R E E + V ALS LH+
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG-- 145
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQ 244
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 146 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D++S G++++E++ G+ P F+
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFN 227
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 82 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 136
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 197 SDVWSFGILLTEIVTHGRIP 216
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 76 NRILGQGGQGTVYKG---MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
++ LG G GTV KG M + + +AVK K +D L +E + E ++ Q+++
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 431
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR----------LRIATEVAGALSYLHS 182
+V+++G C E E +L + E PL ++ + + +V+ + YL
Sbjct: 432 IVRMIGIC-EAESWMLVME---MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 487
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYH 240
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 488 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + KSDV+SFGV++ E + G+KP
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 79 LGQGGQGTVYKGML-EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V + G+++AVKK L + + E NE+VI+ H NVV++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDL----RKQQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 138 GCCLETEV-----------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
L + L + H R E E + V ALS LH+
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG-- 147
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQ 244
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 148 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D++S G++++E++ G+ P F+
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFN 229
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 121/306 (39%), Gaps = 59/306 (19%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGMLED---GRIMAVKKFKLAVDDEELLKLE 116
+F E + + + R LGQG G VY+G D G K + L +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 117 EFINEIVILSQINHRNVVKLLGCCLETEVPL--LHLHDHHRNEEF--------------- 159
EF+NE ++ +VV+LLG + + L + L H + +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 160 PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 219
P T + +++A E+A ++YL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI-Y 181
Query: 220 DQTHVTTKIQGTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ + +G ++ PE + T SD++SFGVVL E
Sbjct: 182 ETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE----------------- 224
Query: 278 NVSLAAFFVHSMRKNHMYDILDDQVVKLV--------KKNQIMAFANLAERCLDLNGKKR 329
+ S+ + + ++QV+K V N +L C N K R
Sbjct: 225 --------ITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMR 276
Query: 330 PTMEEV 335
PT E+
Sbjct: 277 PTFLEI 282
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 79 LGQGGQGTVYKGML-EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V + G+++AVKK L + + E NE+VI+ H NVV++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDL----RKQQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 138 GCCLETEV-----------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
L + L + H R E E + V ALS LH+
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG-- 140
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQ 244
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 141 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D++S G++++E++ G+ P F+
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFN 222
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V K G IMA K L + + + I E+ +L + N +V
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFY 80
Query: 138 GCCL---ETEVPLLHLH----DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G E + + H+ D E + EI +++ V L+YL I H
Sbjct: 81 GAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMH 138
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD+K +NIL++ R K+ DFG S + + GT Y+ PE Q + + +SD
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMAPERLQGTHYSVQSD 195
Query: 251 VYSFGVVLVELLTGKKPI 268
++S G+ LVEL G+ PI
Sbjct: 196 IWSMGLSLVELAVGRYPI 213
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 98
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 157
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 158 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 211
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 257
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 258 ---------EHDEEIIRGQV--FFRQRVSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
SKE+D + + +++G G G V G L+ G+ +A+K K +++ +F
Sbjct: 1 SKEIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR---RDF 55
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLL---------HLHDHHRNEEFPLTWEIRLRI 169
++E I+ Q +H NV+ L G ++ P++ L R + T + +
Sbjct: 56 LSEASIMGQFDHPNVIHLEGVVTKS-TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 114
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--VTTK 227
+A + YL A HR + + NIL++ KV+DFG S+F+ D + T+
Sbjct: 115 LRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 228 IQGTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
+ G + PE Q + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 73 FNVNRILGQGGQGTVYKGMLEDGR-IMAVKK-FKLAVDDEELLKLEEFINEIVILSQINH 130
F++ R LG+G G VY + + IMA+K FK ++ E + + EI I S + H
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRH 73
Query: 131 RNVVKLLGCCLETEVPLLHLHDHHRNEEFP-LTWEIRL---RIAT---EVAGALSYLHSA 183
N++++ + + L L R E + L R R AT E+A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT----KIQGTFGYLEPEY 239
+ HRDIK N+L+ + K+ADFG S H + + GT YL PE
Sbjct: 134 K---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEM 183
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
+ +K D++ GV+ E L G P S +T
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 143
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 144 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 197
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 243
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 244 ---------EHDEEIIGGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 142
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 143 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 196
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 242
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 243 ---------EHDEEIIGGQV--FFRQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 25/208 (12%)
Query: 76 NRILGQGGQGTVYKG---MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
++ LG G GTV KG M + + +AVK K +D L +E + E ++ Q+++
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 432
Query: 133 VVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR----------LRIATEVAGALSYLHS 182
+V+++G C E E +L + E PL ++ + + +V+ + YL
Sbjct: 433 IVRMIGIC-EAESWMLVME---MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 488
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYH 240
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 489 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 241 QSSQLTDKSDVYSFGVVLVELLT-GKKP 267
+ + KSDV+SFGV++ E + G+KP
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 73 FNVNRILGQGGQGTVYKGMLEDGR-IMAVKK-FKLAVDDEELLKLEEFINEIVILSQINH 130
F++ R LG+G G VY + + IMA+K FK ++ E + + EI I S + H
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRH 74
Query: 131 RNVVKLLGCCLETEVPLLHLHDHHRNEEFP-LTWEIRL---RIAT---EVAGALSYLHSA 183
N++++ + + L L R E + L R R AT E+A AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT----KIQGTFGYLEPEY 239
+ HRDIK N+L+ + K+ADFG S H + + GT YL PE
Sbjct: 135 K---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEM 184
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
+ +K D++ GV+ E L G P S +T
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 219
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 44 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 103
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 104 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 162
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 163 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 216
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 217 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 262
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 263 ---------EHDEEIIRGQV--FFRQRVSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 49/281 (17%)
Query: 77 RILGQGGQGTVYKGMLED--GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVV 134
+ +G+G G V ML D G +AVK K +D + F+ E +++Q+ H N+V
Sbjct: 18 QTIGKGEFGDV---MLGDYRGNKVAVKCIK---NDA---TAQAFLAEASVMTQLRHSNLV 68
Query: 135 KLLGCCLETEVPLL---------HLHDHHRNE-EFPLTWEIRLRIATEVAGALSYLHSAA 184
+LLG +E + L L D+ R+ L + L+ + +V A+ YL
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG-- 126
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
+ HRD+ + N+L+ E AKV+DFG +K + Q ++ T PE + +
Sbjct: 127 -NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAA 181
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILD--DQV 302
+ KSDV+SFG++L E I+S G + L V + K + D D
Sbjct: 182 FSTKSDVWSFGILLWE-------IYSFGRVPYPRIPLKD-VVPRVEKGYKMDAPDGCPPA 233
Query: 303 VKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIR 343
V V KN C L+ RP+ ++ +L I+
Sbjct: 234 VYEVMKN-----------CWHLDAAMRPSFLQLREQLEHIK 263
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 143
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 144 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 197
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 243
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 244 ---------EHDEEIIGGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 142
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 143 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 196
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 242
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 243 ---------EHDEEIIGGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 142
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 143 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 196
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 242
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 243 ---------EHDEEIIGGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 49/281 (17%)
Query: 77 RILGQGGQGTVYKGMLED--GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVV 134
+ +G+G G V ML D G +AVK K +D + F+ E +++Q+ H N+V
Sbjct: 12 QTIGKGEFGDV---MLGDYRGNKVAVKCIK---NDA---TAQAFLAEASVMTQLRHSNLV 62
Query: 135 KLLGCCLETEVPLL---------HLHDHHRNE-EFPLTWEIRLRIATEVAGALSYLHSAA 184
+LLG +E + L L D+ R+ L + L+ + +V A+ YL
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG-- 120
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
+ HRD+ + N+L+ E AKV+DFG +K + Q ++ T PE + +
Sbjct: 121 -NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKK 175
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILD--DQV 302
+ KSDV+SFG++L E I+S G + L V + K + D D
Sbjct: 176 FSTKSDVWSFGILLWE-------IYSFGRVPYPRIPLKD-VVPRVEKGYKMDAPDGCPPA 227
Query: 303 VKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIR 343
V V KN C L+ RP+ ++ +L I+
Sbjct: 228 VYEVMKN-----------CWHLDAAMRPSFLQLREQLEHIK 257
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 38/240 (15%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCLETEVPLL---------HLHDHHRNE-EFPLTWEI 165
+ F+ E +++Q+ H N+V+LLG +E + L L D+ R+ L +
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 166 RLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
L+ + +V A+ YL + HRD+ + N+L+ E AKV+DFG +K + Q
Sbjct: 119 LLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFF 285
++ T PE + + + KSDV+SFG++L E I+S G + L
Sbjct: 176 LPVKWT----APEALREKKFSTKSDVWSFGILLWE-------IYSFGRVPYPRIPLKD-V 223
Query: 286 VHSMRKNHMYDILD--DQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIR 343
V + K + D D V V KN C L+ RP+ ++ +L I+
Sbjct: 224 VPRVEKGYKMDAPDGCPPAVYEVMKN-----------CWHLDAAMRPSFLQLREQLEHIK 272
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 142
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 143 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 196
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 242
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 243 ---------EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 85
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 86 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 140
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 201 SDVWSFGILLTEIVTHGRIP 220
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 73 FNVNRILGQGGQGTVYKGM-LEDGRIMAVKKF-KLAVDDEELLKLEEFINEIVILSQINH 130
F +ILG+G TV L R A+K K + E K+ E ++S+++H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 96
Query: 131 RNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTW--------EIRLRIAT-EVAGALSYLH 181
VKL C + E L + +N E L + E R T E+ AL YLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGL-SYAKNGEL-LKYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 182 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLEPEYH 240
I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ PE
Sbjct: 155 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 241 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
SD+++ G ++ +L+ G P F GN
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 243
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 130
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 131 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 184
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 230
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 231 ---------EHDEEIIRGQV--FFRQRVSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 31 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 90
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 149
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 150 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 203
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 204 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 249
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 250 ---------EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 128/319 (40%), Gaps = 63/319 (19%)
Query: 53 SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML-----EDGRI-MAVKKFKLA 106
+ ID +L +++ + N+ + LG G G V + ED + +AVK K
Sbjct: 28 TFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 107 VDDEELLKLEEFINEIVILSQIN-HRNVVKLLGCCLETEVPLLHLHDHH---------RN 156
+E E ++E+ I+S + H N+V LLG C P+L + ++ R
Sbjct: 88 AHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRR 143
Query: 157 EEFPLTWEIRLRIATEVAGALSYLHSA----------ASSPIYHRDIKSTNILLDERYRA 206
+ L + IA A LH + AS HRD+ + N+LL + A
Sbjct: 144 KSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 203
Query: 207 KVADFGTSKFIAMDQTH-VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGK 265
K+ DFG ++ I D + V + ++ PE T +SDV+S+G++L E
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE----- 258
Query: 266 KPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAER----- 320
IFS G + +++ + KLVK MA A +
Sbjct: 259 --IFSLGLNPYPGI-----------------LVNSKFYKLVKDGYQMAQPAFAPKNIYSI 299
Query: 321 ---CLDLNGKKRPTMEEVT 336
C L RPT +++
Sbjct: 300 MQACWALEPTHRPTFQQIC 318
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 11 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 70
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 129
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 130 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 183
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 229
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 230 ---------EHDEEIIRGQV--FFRQRVSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 98
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 157
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 158 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 211
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 257
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 258 ---------EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQ 127
+++ F LG G TVYKG+ + G +A+K+ KL D E I EI ++ +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKL---DSEEGTPSTAIREISLMKE 59
Query: 128 INHRNVVKLLGCCLETEVPLLHLHDHHRNE-----------EFPLTWEIRL--RIATEVA 174
+ H N+V+L + TE L + + N+ P E+ L ++
Sbjct: 60 LKHENIVRLYDV-IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 234
L++ H + I HRD+K N+L+++R + K+ DFG ++ + ++++ T Y
Sbjct: 119 QGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWY 174
Query: 235 LEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 277
P+ S+ S D++S G +L E++TG KP+F N ++
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTNDEEQ 217
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 130
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 131 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 184
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 230
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 231 ---------EHDEEIIRGQV--FFRQRVSXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 115/271 (42%), Gaps = 35/271 (12%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG+G G V K + G+I AVK+ + V+ +E +L ++ + ++ V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLD--ISXRTVDCPFTVTFY 99
Query: 138 GC---------CLE-TEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSP 187
G C E + L + ++ + +I +IA + AL +LHS S
Sbjct: 100 GALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 157
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMD---QTHVTTKIQGTFGYLEPEYHQSSQ 244
+ HRD+K +N+L++ + K DFG S ++ D K + PE +Q
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKG- 216
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVK 304
+ KSD++S G+ +EL + P S G Q+ + ++++ +
Sbjct: 217 YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQ----------------LKQVVEEPSPQ 260
Query: 305 LVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
L F + +CL N K+RPT E+
Sbjct: 261 LPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 79 LGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V+K G +MA K L + + I E+ +L + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 70
Query: 138 GCCL---ETEVPLLHLH----DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G E + + H+ D + + +I +++ V L+YL I H
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 128
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD+K +NIL++ R K+ DFG S + + GT Y+ PE Q + + +SD
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 251 VYSFGVVLVELLTGKKPI 268
++S G+ LVE+ G+ PI
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 79 LGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V+K G +MA K L + + I E+ +L + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 70
Query: 138 GCCL---ETEVPLLHLH----DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G E + + H+ D + + +I +++ V L+YL I H
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 128
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD+K +NIL++ R K+ DFG S + + GT Y+ PE Q + + +SD
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 251 VYSFGVVLVELLTGKKPI 268
++S G+ LVE+ G+ PI
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 130
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 131 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 184
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 230
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 231 ---------EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKL 115
KL KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 11 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 70
Query: 116 EEFINEIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWE 164
E+V+L +++ V++LL LE P+ L D E L E
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEE 129
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 223
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 130 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 183
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 282
V T GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------- 229
Query: 283 AFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 230 ---------EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 79 LGQGGQGTVYKGML-EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V + G+++AVKK L + + E NE+VI+ H NVV++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDL----RKQQRRELLFNEVVIMRDYQHENVVEMY 137
Query: 138 GCCLETEV-----------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
L + L + H R E E + V ALS LH+
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG-- 190
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQ 244
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 191 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D++S G++++E++ G+ P F+
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFN 272
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G VYK GRI+A+K+ +L +DE + I EI +L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPNIVSLID 86
Query: 139 C-----CLE-----TEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPI 188
CL E L + D N+ +I++ + + G +++ H I
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRG-VAHCHQHR---I 140
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+K N+L++ K+ADFG ++ + T ++ T Y P+ S+
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYST 199
Query: 249 S-DVYSFGVVLVELLTGKKPIFS 270
S D++S G + E++TG KP+F
Sbjct: 200 SVDIWSIGCIFAEMITG-KPLFP 221
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G VYK GRI+A+K+ +L +DE + I EI +L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPNIVSLID 86
Query: 139 C-----CLE-----TEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPI 188
CL E L + D N+ +I++ + + G +++ H I
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRG-VAHCHQHR---I 140
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+K N+L++ K+ADFG ++ + T ++ T Y P+ S+
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYST 199
Query: 249 S-DVYSFGVVLVELLTGKKPIFS 270
S D++S G + E++TG KP+F
Sbjct: 200 SVDIWSIGCIFAEMITG-KPLFP 221
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 30/210 (14%)
Query: 77 RILGQGGQ-GTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVK 135
I+G+ G G VYK ++ ++A K +D + +LE+++ EI IL+ +H N+VK
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAK---VIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 136 LLGC-------------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHS 182
LL C V + L E PLT + + AL+YLH
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLHD 126
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
+ I HRD+K+ NIL K+ADFG S GT ++ PE
Sbjct: 127 ---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 243 SQLTD-----KSDVYSFGVVLVELLTGKKP 267
D K+DV+S G+ L+E+ + P
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 79 LGQGGQGTVYKGML-EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V + G+++AVKK L + + E NE+VI+ H NVV++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDL----RKQQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 138 GCCLETEV-----------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
L + L + H R E E + V ALS LH+
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-----EQIAAVCLAVLQALSVLHAQG-- 267
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSSQ 244
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 268 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D++S G++++E++ G+ P F+
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFN 349
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 92 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 260
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 261 PGIPVEELF 269
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 79 LGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V+K G +MA K L + + + I E+ +L + N +V
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFY 97
Query: 138 GCCL---ETEVPLLHLH----DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G E + + H+ D + + +I +++ V L+YL I H
Sbjct: 98 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 155
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD+K +NIL++ R K+ DFG S + + GT Y+ PE Q + + +SD
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSD 212
Query: 251 VYSFGVVLVELLTGKKPI 268
++S G+ LVE+ G+ PI
Sbjct: 213 IWSMGLSLVEMAVGRYPI 230
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 79 LGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V+K G +MA K L + + + I E+ +L + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 138 GCCL---ETEVPLLHLH----DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G E + + H+ D + + +I +++ V L+YL I H
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 128
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD+K +NIL++ R K+ DFG S + + GT Y+ PE Q + + +SD
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 251 VYSFGVVLVELLTGKKPI 268
++S G+ LVE+ G+ PI
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 113/288 (39%), Gaps = 57/288 (19%)
Query: 77 RILGQGGQGTVYKGMLED---GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
R LGQG G VY+G D G K + L + EF+NE ++ +V
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 134 VKLLGCCLETEVPL--LHLHDHHRNEEF---------------PLTWEIRLRIATEVAGA 176
V+LLG + + L + L H + + P T + +++A E+A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYL 235
++YL++ HRD+ + N ++ + K+ DFG ++ I D K ++
Sbjct: 142 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMY 295
PE + T SD++SFGVVL E + S+ +
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWE-------------------------ITSLAEQPYQ 233
Query: 296 DILDDQVVKLV--------KKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ ++QV+K V N +L C N K RPT E+
Sbjct: 234 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 281
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 79 LGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V+K G +MA K L + + I E+ +L + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 70
Query: 138 GCCL---ETEVPLLHLH----DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G E + + H+ D + + +I +++ V L+YL I H
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 128
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD+K +NIL++ R K+ DFG S + + GT Y+ PE Q + + +SD
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 251 VYSFGVVLVELLTGKKPI 268
++S G+ LVE+ G+ PI
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 69/322 (21%)
Query: 53 SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML-----EDGRI-MAVKKFKLA 106
+ ID +L +++ + N+ + LG G G V + ED + +AVK K
Sbjct: 28 TFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 107 VDDEELLKLEEFINEIVILSQIN-HRNVVKLLGCCLETEVPLLHLHDH------------ 153
+E E ++E+ I+S + H N+V LLG C P+L + ++
Sbjct: 88 AHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRR 143
Query: 154 -----HRNEEFPL---TWEIR--LRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER 203
+ F + T R L +++VA +++L AS HRD+ + N+LL
Sbjct: 144 KSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNG 200
Query: 204 YRAKVADFGTSKFIAMDQTH-VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELL 262
+ AK+ DFG ++ I D + V + ++ PE T +SDV+S+G++L E
Sbjct: 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE-- 258
Query: 263 TGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAER-- 320
IFS G + +++ + KLVK MA A +
Sbjct: 259 -----IFSLGLNPYPGI-----------------LVNSKFYKLVKDGYQMAQPAFAPKNI 296
Query: 321 ------CLDLNGKKRPTMEEVT 336
C L RPT +++
Sbjct: 297 YSIMQACWALEPTHRPTFQQIC 318
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 73 FNVNRILGQGGQGTVYKGMLEDGR-IMAVKK-FKLAVDDEELLKLEEFINEIVILSQINH 130
F++ R LG+G G VY + + IMA+K FK ++ E + + EI I S + H
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRH 73
Query: 131 RNVVKLLGCCLETEVPLLHLHDHHRNEEFP-LTWEIRL---RIAT---EVAGALSYLHSA 183
N++++ + + L L R E + L R R AT E+A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT----KIQGTFGYLEPEY 239
+ HRDIK N+L+ + K+ADFG S H + + GT YL PE
Sbjct: 134 K---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEM 183
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
+ +K D++ GV+ E L G P S +T
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 77 RILGQGGQGTVYKGMLED---GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
R LGQG G VY+G D G K + L + EF+NE ++ +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 134 VKLLGCCLETEVPL--LHLHDHHRNEEF---------------PLTWEIRLRIATEVAGA 176
V+LLG + + L + L H + + P T + +++A E+A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTFGYL 235
++YL++ HRD+ + N ++ + K+ DFG ++ I D K ++
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLT 263
PE + T SD++SFGVVL E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + + F+ E ++ Q+ H+ +V+L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-----QGSMSPDAFLAEANLMKQLQHQRLVRLYA 71
Query: 139 CCLETEVPLLHLHDHHRNEEF----------PLTWEIRLRIATEVAGALSYLHSAASSPI 188
T+ P+ + ++ N LT L +A ++A ++++
Sbjct: 72 VV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---Y 126
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HR++++ NIL+ + K+ADFG ++ I ++ + + PE T K
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T G+ P
Sbjct: 187 SDVWSFGILLTEIVTHGRIP 206
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 132/331 (39%), Gaps = 78/331 (23%)
Query: 53 SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML-----EDGRI-MAVKKFKLA 106
+ ID +L +++ + N+ + LG G G V + ED + +AVK K
Sbjct: 13 TFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 72
Query: 107 VDDEELLKLEEFINEIVILSQIN-HRNVVKLLGCCLETEVPLLHLHDH------------ 153
+E E ++E+ I+S + H N+V LLG C P+L + ++
Sbjct: 73 AHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRR 128
Query: 154 -------------------HRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIK 194
+ + PL L +++VA +++L AS HRD+
Sbjct: 129 KAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 185
Query: 195 STNILLDERYRAKVADFGTSKFIAMDQTH-VTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
+ N+LL + AK+ DFG ++ I D + V + ++ PE T +SDV+S
Sbjct: 186 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 245
Query: 254 FGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMA 313
+G++L E IFS G + +++ + KLVK MA
Sbjct: 246 YGILLWE-------IFSLGLNPYPGI-----------------LVNSKFYKLVKDGYQMA 281
Query: 314 FANLAER--------CLDLNGKKRPTMEEVT 336
A + C L RPT +++
Sbjct: 282 QPAFAPKNIYSIMQACWALEPTHRPTFQQIC 312
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 79 LGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V+K G +MA K L + + I E+ +L + N +V
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 73
Query: 138 GCCL---ETEVPLLHLH----DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G E + + H+ D + + +I +++ V L+YL I H
Sbjct: 74 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 131
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD+K +NIL++ R K+ DFG S + +D+ + + GT Y+ PE Q + + +SD
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDE--MANEFVGTRSYMSPERLQGTHYSVQSD 188
Query: 251 VYSFGVVLVELLTGKKP 267
++S G+ LVE+ G+ P
Sbjct: 189 IWSMGLSLVEMAVGRYP 205
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 27/255 (10%)
Query: 95 GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLGCCLETE---------- 144
G ++AVK K + ++ EI IL + H +++K GCC +
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 145 VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERY 204
VPL L D+ L L A ++ ++YLH+ HRD+ + N+LLD
Sbjct: 117 VPLGSLRDYLPRHSIGLA--QLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDR 171
Query: 205 RAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLEPEYHQSSQLTDKSDVYSFGVVLVEL 261
K+ DFG +K + + G F Y PE + + SDV+SFGV L EL
Sbjct: 172 LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYEL 230
Query: 262 LTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMA-FANLAER 320
LT S E + +A + +R + ++ +L + ++ A +L +
Sbjct: 231 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL----ERGERLPRPDKCPAEVYHLMKN 286
Query: 321 CLDLNGKKRPTMEEV 335
C + RPT E +
Sbjct: 287 CWETEASFRPTFENL 301
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 37/275 (13%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V G + +AVK K E + +EF E + +++H +VK G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-----EGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 139 CCLETEVPLL---------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIY 189
C E P+ L ++ R+ L L + +V +++L S
Sbjct: 71 VC-SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FI 126
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRD+ + N L+D KV+DFG ++++ DQ + + + PE + + KS
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 250 DVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKK 308
DV++FG+++ E+ + GK P N+ V L H + + H+ D +
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNS---EVVLKVSQGHRLYRPHL---ASDTIY----- 235
Query: 309 NQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIR 343
QIM C +KRPT +++ + +R
Sbjct: 236 -QIMY------SCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLLHL------------------------HDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 92 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 260
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 261 PGIPVEELF 269
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 79 LGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V+K G +MA K L + + + I E+ +L + N +V
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFY 132
Query: 138 GCCL---ETEVPLLHLH----DHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYH 190
G E + + H+ D + + +I +++ V L+YL I H
Sbjct: 133 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 190
Query: 191 RDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSD 250
RD+K +NIL++ R K+ DFG S + + GT Y+ PE Q + + +SD
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSD 247
Query: 251 VYSFGVVLVELLTGKKPI 268
++S G+ LVE+ G+ PI
Sbjct: 248 IWSMGLSLVEMAVGRYPI 265
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 31/207 (14%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V + G+ +AVKK L + + E NE+VI+ +H NVV +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDL----RKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 138 GCCLETEV-----------PLLHLHDHHR-NEEFPLTWEIRLRIATEVAGALSYLHSAAS 185
L + L + H R NEE T + V ALSYLH+
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLHNQG- 161
Query: 186 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLEPEYHQSS 243
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 162 --VIHRDIKSDSILLTSDGRIKLSDFG---FCAQVSKEVPKRKXLVGTPYWMAPEVISRL 216
Query: 244 QLTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D++S G++++E++ G+ P F+
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDGEPPYFN 243
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 79 LGQGGQGTVYKGML-EDGRIMAVKKFKLAVDDEE----LLKLEEFI--NEIVILSQ---- 127
+G G G V+K + G ++AVK+ + + + EE L+ L+ + ++ + Q
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 128 -INHRNV---VKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSA 183
I + +V ++L+G C E + + P+ I ++ + AL YL
Sbjct: 93 FITNTDVFIAMELMGTCAEK---------LKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
+ HRD+K +NILLDER + K+ DFG S + D+ + G Y+ PE
Sbjct: 144 HG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK--DRSAGCAAYMAPERIDPP 199
Query: 244 QLTD-----KSDVYSFGVVLVELLTGKKP 267
T ++DV+S G+ LVEL TG+ P
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 92 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 260
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 261 PGIPVEELF 269
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 53/313 (16%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYK----GMLEDGRIMAVKKFKLAVDDE 110
ID +L + + N + + LG G G V + G+++ M V K+
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVA-VKMLKPSA 88
Query: 111 ELLKLEEFINEIVILSQI-NHRNVVKLLGCCLETEVPLLHLHDH-----------HRNEE 158
L + E ++E+ +LS + NH N+V LLG C P L + ++ + +
Sbjct: 89 HLTEREALMSELKVLSYLGNHMNIVNLLGAC-TIGGPTLVITEYCCYGDLLNFLRRKRDS 147
Query: 159 FPLT---------------WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER 203
F + E L + +VA +++L AS HRD+ + NILL
Sbjct: 148 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHG 204
Query: 204 YRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELL 262
K+ DFG ++ I D +V + ++ PE + T +SDV+S+G+ L EL
Sbjct: 205 RITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL- 263
Query: 263 TGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCL 322
FS G++ + + + F Y ++ + L ++ ++ + C
Sbjct: 264 ------FSLGSSPYPGMPVDSKF---------YKMIKEGFRMLSPEHAPAEMYDIMKTCW 308
Query: 323 DLNGKKRPTMEEV 335
D + KRPT +++
Sbjct: 309 DADPLKRPTFKQI 321
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 92 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 260
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 261 PGIPVEELF 269
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 95 GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLGCCLETE---------- 144
G ++AVK K + ++ EI IL + H +++K GCC +
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 145 VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERY 204
VPL L D+ L L A ++ ++YLHS HR++ + N+LLD
Sbjct: 100 VPLGSLRDYLPRHSIGLA--QLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDR 154
Query: 205 RAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLEPEYHQSSQLTDKSDVYSFGVVLVEL 261
K+ DFG +K + + + G F Y PE + + SDV+SFGV L EL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYEL 213
Query: 262 LT 263
LT
Sbjct: 214 LT 215
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEEDLSDLVSEM 91
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 92 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 260
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 261 PGIPVEELF 269
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 92 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 260
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 261 PGIPVEELF 269
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE + SD+++ G ++ +L+ G P F GN
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 92 EMMKMIGKHKNIITLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 260
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 261 PGIPVEELF 269
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 100/235 (42%), Gaps = 56/235 (23%)
Query: 78 ILGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKL 136
+LGQG G V K D R A+KK + EE KL ++E+ +L+ +NH+ VV+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHT---EE--KLSTILSEVXLLASLNHQYVVRY 67
Query: 137 LGCCLE-----------------------TEVPLLH--LHDHHRNEEFPLTWEIRLRIAT 171
LE E L+ +H + N++ W R+
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFR 123
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK-------FIAMDQTHV 224
++ ALSY+HS I HR++K NI +DE K+ DFG +K + +D ++
Sbjct: 124 QILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 225 T------TKIQGTFGYLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTG 272
T GT Y+ E + +K D YS G++ E + FSTG
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYP----FSTG 231
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 73 FNVNRILGQGGQGTVYKG-MLEDGRIMAVKKFKLAVDDEELLK---LEEFINEIVILSQI 128
F V +LG+G VY+ + G +A+K +D + + K ++ NE+ I Q+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIK----MIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHH--------RNEEFPLTWEIRLRIATEVAGALSYL 180
H ++++L ++ L L H +N P + ++ + YL
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD-QTHVTTKIQGTFGYLEPEY 239
HS I HRD+ +N+LL K+ADFG + + M + H T + GT Y+ PE
Sbjct: 129 HSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGKKP 267
S +SDV+S G + LL G+ P
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGMLE-DGR---IMAVKKFKLAVDDEELLKLEEF 118
+KE++ + + R++G G G V G L+ G+ +A+K K+ +++ +F
Sbjct: 16 AKEIEASC--ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR---RDF 70
Query: 119 INEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---------EEFPLTWEIRLRI 169
+ E I+ Q +H N++ L G +++ P++ + ++ N + T + +
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTKSK-PVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM 129
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
++ + YL HRD+ + NIL++ KV+DFG S+ + D T
Sbjct: 130 LRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 186
Query: 230 GTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
G + PE + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 187 GKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN 233
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 75 VNRILGQGGQGTVYK----GMLED--GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ + LG+G G V G+ +D R+ V K+ D L + I+E+ ++ I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA-VKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 129 N-HRNVVKLLGCC---------------------LETEVP--LLHLHDHHRNEEFPLTWE 164
H+N++ LLG C L+ P L + ++ N E L+ +
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 223
+ A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 283
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 260
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
F +++ H D N + C +RPT +++ +L+ I
Sbjct: 261 LF-KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 92 EMMKMIGKHKNIIHLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 260
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 261 PGIPVEELF 269
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 75 VNRILGQGGQGTVYK----GMLED--GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ + LG+G G V G+ +D R+ V K+ D L + I+E+ ++ I
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA-VKMLKSDATEKDLSDLISEMEMMKMI 75
Query: 129 N-HRNVVKLLGCC---------------------LETEVP--LLHLHDHHRNEEFPLTWE 164
H+N++ LLG C L+ P L + ++ N E L+ +
Sbjct: 76 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 223
+ A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 136 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 283
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 245
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
F +++ H D N + C +RPT +++ +L+ I
Sbjct: 246 LF-KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 53/313 (16%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYK----GMLEDGRIMAVKKFKLAVDDE 110
ID +L + + N + + LG G G V + G+++ M V K+
Sbjct: 25 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVA-VKMLKPSA 83
Query: 111 ELLKLEEFINEIVILSQI-NHRNVVKLLGCCLETEVPLLHLHDH-----------HRNEE 158
L + E ++E+ +LS + NH N+V LLG C P L + ++ + +
Sbjct: 84 HLTEREALMSELKVLSYLGNHMNIVNLLGAC-TIGGPTLVITEYCCYGDLLNFLRRKRDS 142
Query: 159 FPLT---------------WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER 203
F + E L + +VA +++L AS HRD+ + NILL
Sbjct: 143 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHG 199
Query: 204 YRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELL 262
K+ DFG ++ I D +V + ++ PE + T +SDV+S+G+ L EL
Sbjct: 200 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL- 258
Query: 263 TGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCL 322
FS G++ + + + F Y ++ + L ++ ++ + C
Sbjct: 259 ------FSLGSSPYPGMPVDSKF---------YKMIKEGFRMLSPEHAPAEMYDIMKTCW 303
Query: 323 DLNGKKRPTMEEV 335
D + KRPT +++
Sbjct: 304 DADPLKRPTFKQI 316
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 114 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 213
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 48/288 (16%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKLEEFIN 120
KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 121 EIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRI 169
E+V+L +++ V++LL LE P+ L D E L E+
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEELARSF 142
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKI 228
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T
Sbjct: 143 FWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDF 196
Query: 229 QGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 197 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------------------- 237
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 238 ----EHDEEIIRGQV--FFRQRVSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 115 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 214
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 83
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 84 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 252
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 253 PGIPVEELF 261
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 117 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 216
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 53/313 (16%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYK----GMLEDGRIMAVKKFKLAVDDE 110
ID +L + + N + + LG G G V + G+++ M V K+
Sbjct: 23 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVA-VKMLKPSA 81
Query: 111 ELLKLEEFINEIVILSQI-NHRNVVKLLGCCLETEVPLLHLHDH-----------HRNEE 158
L + E ++E+ +LS + NH N+V LLG C P L + ++ + +
Sbjct: 82 HLTEREALMSELKVLSYLGNHMNIVNLLGAC-TIGGPTLVITEYCCYGDLLNFLRRKRDS 140
Query: 159 FPLT---------------WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER 203
F + E L + +VA +++L AS HRD+ + NILL
Sbjct: 141 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHG 197
Query: 204 YRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELL 262
K+ DFG ++ I D +V + ++ PE + T +SDV+S+G+ L EL
Sbjct: 198 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL- 256
Query: 263 TGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCL 322
FS G++ + + + F Y ++ + L ++ ++ + C
Sbjct: 257 ------FSLGSSPYPGMPVDSKF---------YKMIKEGFRMLSPEHAPAEMYDIMKTCW 301
Query: 323 DLNGKKRPTMEEV 335
D + KRPT +++
Sbjct: 302 DADPLKRPTFKQI 314
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 53/313 (16%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYK----GMLEDGRIMAVKKFKLAVDDE 110
ID +L + + N + + LG G G V + G+++ M V K+
Sbjct: 7 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVA-VKMLKPSA 65
Query: 111 ELLKLEEFINEIVILSQI-NHRNVVKLLGCCLETEVPLLHLHDH-----------HRNEE 158
L + E ++E+ +LS + NH N+V LLG C P L + ++ + +
Sbjct: 66 HLTEREALMSELKVLSYLGNHMNIVNLLGAC-TIGGPTLVITEYCCYGDLLNFLRRKRDS 124
Query: 159 FPLT---------------WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER 203
F + E L + +VA +++L AS HRD+ + NILL
Sbjct: 125 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHG 181
Query: 204 YRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELL 262
K+ DFG ++ I D +V + ++ PE + T +SDV+S+G+ L EL
Sbjct: 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL- 240
Query: 263 TGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCL 322
FS G++ + + + F Y ++ + L ++ ++ + C
Sbjct: 241 ------FSLGSSPYPGMPVDSKF---------YKMIKEGFRMLSPEHAPAEMYDIMKTCW 285
Query: 323 DLNGKKRPTMEEV 335
D + KRPT +++
Sbjct: 286 DADPLKRPTFKQI 298
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 116 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 215
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 62/302 (20%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLE-DGRIM--AVKKFK-LAVDDEELLKLEEFINEIVILS 126
N ++G+G G V K ++ DG M A+K+ K A D+ +F E+ +L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH----RDFAGELEVLC 80
Query: 127 QINHR-NVVKLLGCC-------LETE-VPLLHLHDHHRN----EEFP-----------LT 162
++ H N++ LLG C L E P +L D R E P L+
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 163 WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 222
+ L A +VA + YL + HRD+ + NIL+ E Y AK+ADFG S+ Q
Sbjct: 141 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQE 193
Query: 223 HVTTKIQGTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
K G ++ E S T SDV+S+GV+L E I S G T ++
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE-------IVSLGGTPYCGMT 246
Query: 281 LAAFFVHSMRKNHMYDIL--DDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTME 338
A + + + L DD+V L+++ C +RP+ ++ +
Sbjct: 247 CAELYEKLPQGYRLEKPLNCDDEVYDLMRQ------------CWREKPYERPSFAQILVS 294
Query: 339 LN 340
LN
Sbjct: 295 LN 296
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 137
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 138 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 306
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 307 PGIPVEELF 315
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 121 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 220
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 92 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E ++ADFG ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 260
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 261 PGIPVEELF 269
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 78
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 79 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 247
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 248 PGIPVEELF 256
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 107/259 (41%), Gaps = 30/259 (11%)
Query: 72 HFNVNRILGQGGQGTVY-----KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
+F + ++LG G G V+ G + G++ A+K K A ++ E E +L
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGH-DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 127 QINHRNVVKLLGCCLETEVPL-------------LHLHDHHRNEEFPLTWEIRLRIATEV 173
I + L +TE L HL R E E+++ + E+
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH----EVQIYVG-EI 168
Query: 174 AGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 233
AL +LH I +RDIK NILLD + DFG SK D+T GT
Sbjct: 169 VLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 234 YLEPEYHQSSQLT-DKS-DVYSFGVVLVELLTGKKPIFSTGN-TSQENVSLAAFFVHSMR 290
Y+ P+ + DK+ D +S GV++ ELLTG P G SQ +S
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY 285
Query: 291 KNHMYDILDDQVVKLVKKN 309
M + D + +L+ K+
Sbjct: 286 PQEMSALAKDLIQRLLMKD 304
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 53/313 (16%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYK----GMLEDGRIMAVKKFKLAVDDE 110
ID +L + + N + + LG G G V + G+++ M V K+
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVA-VKMLKPSA 88
Query: 111 ELLKLEEFINEIVILSQI-NHRNVVKLLGCCLETEVPLLHLHDH-----------HRNEE 158
L + E ++E+ +LS + NH N+V LLG C P L + ++ + +
Sbjct: 89 HLTEREALMSELKVLSYLGNHMNIVNLLGAC-TIGGPTLVITEYCCYGDLLNFLRRKRDS 147
Query: 159 FPLT---------------WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER 203
F + E L + +VA +++L AS HRD+ + NILL
Sbjct: 148 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHG 204
Query: 204 YRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELL 262
K+ DFG ++ I D +V + ++ PE + T +SDV+S+G+ L EL
Sbjct: 205 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL- 263
Query: 263 TGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCL 322
FS G++ + + + F Y ++ + L ++ ++ + C
Sbjct: 264 ------FSLGSSPYPGMPVDSKF---------YKMIKEGFRMLSPEHAPAEMYDIMKTCW 308
Query: 323 DLNGKKRPTMEEV 335
D + KRPT +++
Sbjct: 309 DADPLKRPTFKQI 321
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 62/302 (20%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLE-DGRIM--AVKKFK-LAVDDEELLKLEEFINEIVILS 126
N ++G+G G V K ++ DG M A+K+ K A D+ +F E+ +L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH----RDFAGELEVLC 70
Query: 127 QINHR-NVVKLLGCC-------LETE-VPLLHLHDHHRN----EEFP-----------LT 162
++ H N++ LLG C L E P +L D R E P L+
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 163 WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 222
+ L A +VA + YL + HRD+ + NIL+ E Y AK+ADFG S+ Q
Sbjct: 131 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQE 183
Query: 223 HVTTKIQGTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
K G ++ E S T SDV+S+GV+L E I S G T ++
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE-------IVSLGGTPYCGMT 236
Query: 281 LAAFFVHSMRKNHMYDIL--DDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTME 338
A + + + L DD+V L+++ C +RP+ ++ +
Sbjct: 237 CAELYEKLPQGYRLEKPLNCDDEVYDLMRQ------------CWREKPYERPSFAQILVS 284
Query: 339 LN 340
LN
Sbjct: 285 LN 286
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 48/288 (16%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKLEEFIN 120
KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 121 EIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRI 169
E+V+L +++ V++LL LE P+ L D E L E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEELARSF 120
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKI 228
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T
Sbjct: 121 FWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDF 174
Query: 229 QGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------------------- 215
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 216 ----EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 136 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 235
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 22/211 (10%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
N F R+LG+GG G V + M K ++ +NE IL ++N
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 131 RNVVKLLGCCLETEVPL-----------LHLHDHHRNEE-FPLTWEIR-LRIATEVAGAL 177
R VV L ET+ L L H +H + FP E R + A E+ L
Sbjct: 244 RFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYAAEICCGL 299
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEP 237
LH I +RD+K NILLD+ +++D G + + QT + ++ GT GY+ P
Sbjct: 300 EDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAP 354
Query: 238 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
E ++ + T D ++ G +L E++ G+ P
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 136 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 235
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 137 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 22/211 (10%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
N F R+LG+GG G V + M K ++ +NE IL ++N
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 131 RNVVKLLGCCLETEVPL-----------LHLHDHHRNEE-FPLTWEIR-LRIATEVAGAL 177
R VV L ET+ L L H +H + FP E R + A E+ L
Sbjct: 244 RFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYAAEICCGL 299
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEP 237
LH I +RD+K NILLD+ +++D G + + QT + ++ GT GY+ P
Sbjct: 300 EDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAP 354
Query: 238 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
E ++ + T D ++ G +L E++ G+ P
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 140 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 239
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEI 122
+ + + LG+G G V K ++ +AVK K DD L + ++E+
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 80
Query: 123 VILSQIN-HRNVVKLLGCCLETEVPLL------------------------HLHDHHRNE 157
++ I H+N++ LLG C + + PL + +D +R
Sbjct: 81 EMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 158 EFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI 217
E +T++ + ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 218 -AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPY 249
Query: 277 ENVSLAAFF 285
+ + F
Sbjct: 250 PGIPVEELF 258
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Query: 73 FNVNRILGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHR 131
+ V +G G G K DG+I+ K+ E ++ ++E+ +L ++ H
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHP 65
Query: 132 NVVKLLGCCLETEVPLLHLHDHH-------------RNEEFPLTWEIRLRIATEVAGALS 178
N+V+ ++ L++ + E L E LR+ T++ AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 179 YLH--SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
H S + HRD+K N+ LD + K+ DFG ++ + D + T + GT Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMS 184
Query: 237 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 267
PE +KSD++S G +L EL P
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 140 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 239
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H LG+G G+V Y + ++ G ++AVK+ + + D++ +F EI IL
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILK 63
Query: 127 QINHRNVVKLLGCCLETEVPLLHL----------HDHHRNEEFPLTWEIRLRIATEVAGA 176
++ +VK G P L L D + L L ++++
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--VTTKIQGTFGY 234
+ YL S HRD+ + NIL++ K+ADFG +K + +D+ V Q +
Sbjct: 124 MEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
PE + + +SDV+SFGVVL EL T
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 137 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 137 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 48/288 (16%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKLEEFIN 120
KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 121 EIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRI 169
E+V+L +++ V++LL LE P+ L D E L E+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEELARSF 119
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKI 228
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T
Sbjct: 120 FWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDF 173
Query: 229 QGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------------------- 214
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 215 ----EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 48/288 (16%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKLEEFIN 120
KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 121 EIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRI 169
E+V+L +++ V++LL LE P+ L D E L E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEELARSF 120
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKI 228
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T
Sbjct: 121 FWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDF 174
Query: 229 QGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------------------- 215
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 216 ----EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 137 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 48/288 (16%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKLEEFIN 120
KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 121 EIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRI 169
E+V+L +++ V++LL LE P+ L D E L E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEELARSF 120
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKI 228
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T
Sbjct: 121 FWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDF 174
Query: 229 QGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------------------- 215
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 216 ----EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 75 VNRILGQGGQGTVYK----GMLED--GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ + LG+G G V G+ +D R+ V K+ D L + I+E+ ++ I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA-VKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 129 N-HRNVVKLLGCCLET----------------------EVP-LLHLHDHHRNEEFPLTWE 164
H+N++ LLG C + E P L + ++ N E L+ +
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 223
+ A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 283
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 260
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
F +++ H D N + C +RPT +++ +L+ I
Sbjct: 261 LF-KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 105/233 (45%), Gaps = 50/233 (21%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKK----FKLAVDDEELLKLEEFINEIVILSQIN-HRN 132
LG+G G V+K + G ++AVKK F+ + D + + EI+IL++++ H N
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR------EIMILTELSGHEN 70
Query: 133 VVKLLGCC-LETEVPLLHLHDHHRNEEFPLTWEIRLRIATEV---------AGALSYLHS 182
+V LL + + + + D+ E L IR I V + YLHS
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHS 127
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAM-------------------DQT 222
+ HRD+K +NILL+ KVADFG S+ F+ + D
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 223 HVTTKIQGTFGYLEPE-YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
+ T T Y PE S++ T D++S G +L E+L G KPIF +T
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPIFPGSST 236
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 95 GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLGCCLETE---------- 144
G ++AVK K + ++ EI IL + H +++K GCC +
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 145 VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERY 204
VPL L D+ L L A ++ ++YLH+ HR++ + N+LLD
Sbjct: 100 VPLGSLRDYLPRHSIGLA--QLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDR 154
Query: 205 RAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLEPEYHQSSQLTDKSDVYSFGVVLVEL 261
K+ DFG +K + + + G F Y PE + + SDV+SFGV L EL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYEL 213
Query: 262 LT 263
LT
Sbjct: 214 LT 215
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 142 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 241
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQ 229
E+ AL YLH I HRD+K NILL+E ++ DFGT+K ++ +
Sbjct: 139 AEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
GT Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
+HF + R +G+G G V D + M K+ E ++ E+ I+ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 131 RNVVKLLGCCLETE-----VPLLHLHD--HHRNEEFPLTWEIRLRIATEVAGALSYLHSA 183
+V L + E V LL D +H + E E+ AL YL +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K NILLDE + DF + + +T +TT + GT Y+ PE S
Sbjct: 135 R---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT-MAGTKPYMAPEMFSSR 189
Query: 244 QLTDKS---DVYSFGVVLVELLTGKKPIFSTGNTSQENV 279
+ S D +S GV ELL G++P +TS + +
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI 228
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G VYK G A+KK +L +DE + I EI IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 139 CCLETEVPLLHLHDHHRNEEFPL--TWEIRLRIATEVAGALSYLHSAA---SSPIYHRDI 193
+ T+ L+ + +H + L E L T + L L+ A + HRD+
Sbjct: 68 V-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DVY 252
K N+L++ K+ADFG ++ + T +I T Y P+ S+ + D++
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 253 SFGVVLVELLTGKKPIFS 270
S G + E++ G P+F
Sbjct: 186 SVGCIFAEMVNG-TPLFP 202
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 43/285 (15%)
Query: 73 FNVNRILGQGGQGTVYKGMLEDGR----IMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
F ++++LG+G G V+ + I A+KK + +DD+ +E + E +LS
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD----VECTMVEKRVLSLA 75
Query: 129 NHRNVVKLLGCCLETEVPLL-------------HLHDHHRNEEFPLTWEIRLRIATEVAG 175
+ + C +T+ L H+ H+ + T+ A E+
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIIL 130
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L +LHS I +RD+K NILLD+ K+ADFG K + T + GT Y+
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYI 186
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMY 295
PE + D +SFGV+L E+L G+ P G +E HS+R ++ +
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEE-------LFHSIRMDNPF 237
Query: 296 DILDDQVVKLVKKNQIMAFANLAERCLDLNG--KKRPTMEEVTME 338
+ K K + F E+ L + G ++ P E+ E
Sbjct: 238 --YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE 280
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 75 VNRILGQGGQGTVYK----GMLED--GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ + LG+G G V G+ +D R+ V K+ D L + I+E+ ++ I
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA-VKMLKSDATEKDLSDLISEMEMMKMI 79
Query: 129 N-HRNVVKLLGCC---------------------LETEVP--LLHLHDHHRNEEFPLTWE 164
H+N++ LLG C L+ P L + ++ N E L+ +
Sbjct: 80 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 223
+ A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 140 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 283
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 249
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
F +++ H D N + C +RPT +++ +L+ I
Sbjct: 250 LF-KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 48/270 (17%)
Query: 98 MAVKKFKLAVDDEELLKLEEFINEIVILSQIN-HRNVVKLLGCC---------------- 140
+AVK K +++L + I+E+ ++ I H+N++ LLG C
Sbjct: 63 VAVKMLKSDATEKDL---SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 141 -----LETEVP--LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDI 193
L+ P L + ++ N E L+ + + A +VA + YL AS HRD+
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 194 KSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVY 252
+ N+L+ E K+ADFG ++ I +D TT + ++ PE T +SDV+
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 236
Query: 253 SFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIM 312
SFGV+L E IF+ G + V + F +++ H D N
Sbjct: 237 SFGVLLWE-------IFTLGGSPYPGVPVEELF-KLLKEGHRMD---------KPSNCTN 279
Query: 313 AFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ C +RPT +++ +L+ I
Sbjct: 280 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 75 VNRILGQGGQGTVYK----GMLED--GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ + LG+G G V G+ +D R+ V K+ D L + I+E+ ++ I
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA-VKMLKSDATEKDLSDLISEMEMMKMI 83
Query: 129 N-HRNVVKLLGCC---------------------LETEVP--LLHLHDHHRNEEFPLTWE 164
H+N++ LLG C L+ P L + ++ N E L+ +
Sbjct: 84 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 223
+ A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 144 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 283
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 253
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
F +++ H D N + C +RPT +++ +L+ I
Sbjct: 254 LF-KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G+V K + G+IMAVK+ + VD++E +L ++ V++ + +V+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQL--LMDLDVVMRSSDCPYIVQFY 87
Query: 138 GC---------CLE---TEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAAS 185
G C+E T + + + ++ + EI +I AL++L
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDV-IPEEILGKITLATVKALNHLKENLK 146
Query: 186 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPE---YHQS 242
I HRDIK +NILLD K+ DFG S + + T+ G Y+ PE S
Sbjct: 147 --IIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 243 SQLTD-KSDVYSFGVVLVELLTGKKP 267
Q D +SDV+S G+ L EL TG+ P
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 75 VNRILGQGGQGTVYK----GMLED--GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ + LG+G G V G+ +D R+ V K+ D L + I+E+ ++ I
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA-VKMLKSDATEKDLSDLISEMEMMKMI 82
Query: 129 N-HRNVVKLLGCC---------------------LETEVP--LLHLHDHHRNEEFPLTWE 164
H+N++ LLG C L+ P L + ++ N E L+ +
Sbjct: 83 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 223
+ A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 143 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 283
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 252
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
F +++ H D N + C +RPT +++ +L+ I
Sbjct: 253 LF-KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 126/296 (42%), Gaps = 47/296 (15%)
Query: 73 FNVNRILGQGGQGTV----YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
++V +++G+G G V +K + + + KF++ + F E I++
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAF----FWEERDIMAFA 132
Query: 129 NHRNVVKLLGCCLETE---------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSY 179
N VV+L C + + +P L + N + P W + A EV AL
Sbjct: 133 NSPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKW-AKFYTA-EVVLALDA 189
Query: 180 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT---HVTTKIQGTFGYLE 236
+HS + HRD+K N+LLD+ K+ADFGT + MD+T H T + GT Y+
Sbjct: 190 IHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAV-GTPDYIS 243
Query: 237 PEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRK 291
PE + SQ D + D +S GV L E+L G P ++ SL + M
Sbjct: 244 PEVLK-SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD--------SLVGTYSKIMDH 294
Query: 292 NHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNG----KKRPTMEEVTMELNGIR 343
+ +D + KN I AF E L NG K+ P + + IR
Sbjct: 295 KNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIR 350
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G VYK G A+KK +L +DE + I EI IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 139 CCLETEVPLLHLHDHHRNEEFPL--TWEIRLRIATEVAGALSYLHSAA---SSPIYHRDI 193
+ T+ L+ + +H + L E L T + L L+ A + HRD+
Sbjct: 68 V-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DVY 252
K N+L++ K+ADFG ++ + T ++ T Y P+ S+ + D++
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 253 SFGVVLVELLTGKKPIFS 270
S G + E++ G P+F
Sbjct: 186 SVGCIFAEMVNG-APLFP 202
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVK--KFKLAVDDEELLKLEEFINEIVILSQIN 129
F++ R++G+G V L+ RI A+K K +L DDE++ ++ E + Q +
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQ---TEKHVFEQAS 63
Query: 130 HRNVVKLLGCCLETEVPLLHLHDH--------HRNEEFPLTWEIRLRIATEVAGALSYLH 181
+ + L C +TE L + ++ H + L E + E++ AL+YLH
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 182 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
I +RD+K N+LLD K+ D+G K + T+ GT Y+ PE +
Sbjct: 124 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILR 179
Query: 242 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
D ++ GV++ E++ G+ P G++ +
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 216
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 48/270 (17%)
Query: 98 MAVKKFKLAVDDEELLKLEEFINEIVILSQIN-HRNVVKLLGCC---------------- 140
+AVK K +++L + I+E+ ++ I H+N++ LLG C
Sbjct: 104 VAVKMLKSDATEKDL---SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 160
Query: 141 -----LETEVP--LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDI 193
L+ P L + ++ N E L+ + + A +VA + YL AS HRD+
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 217
Query: 194 KSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVY 252
+ N+L+ E K+ADFG ++ I +D TT + ++ PE T +SDV+
Sbjct: 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 277
Query: 253 SFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIM 312
SFGV+L E IF+ G + V + F +++ H D N
Sbjct: 278 SFGVLLWE-------IFTLGGSPYPGVPVEELF-KLLKEGHRMD---------KPSNCTN 320
Query: 313 AFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ C +RPT +++ +L+ I
Sbjct: 321 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 49/254 (19%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML--EDGR----IMAVKKFKLAVD 108
+D K+ + + + + + LG+G G V K GR +AVK K
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 109 DEELLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHR------------- 155
EL + ++E +L Q+NH +V+KL G C + PLL + ++ +
Sbjct: 67 PSEL---RDLLSEFNVLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRK 122
Query: 156 -------------------NEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKST 196
+E LT + A +++ + YL A + HRD+ +
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAAR 179
Query: 197 NILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYHQSSQLTDKSDVYSF 254
NIL+ E + K++DFG S+ + + ++V + QG ++ E T +SDV+SF
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 255 GVVLVELLT-GKKP 267
GV+L E++T G P
Sbjct: 239 GVLLWEIVTLGGNP 252
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVK--KFKLAVDDEELLKLEEFINEIVILSQIN 129
F++ R++G+G V L+ RI A+K K +L DDE++ ++ E + Q +
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQ---TEKHVFEQAS 78
Query: 130 HRNVVKLLGCCLETEVPLLHLHDH--------HRNEEFPLTWEIRLRIATEVAGALSYLH 181
+ + L C +TE L + ++ H + L E + E++ AL+YLH
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 182 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
I +RD+K N+LLD K+ D+G K + T+ GT Y+ PE +
Sbjct: 139 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILR 194
Query: 242 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
D ++ GV++ E++ G+ P G++ +
Sbjct: 195 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 231
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G VYK G A+KK +L +DE + I EI IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 139 CCLETEVPLLHLHDHHRNEEFPL--TWEIRLRIATEVAGALSYLHSAA---SSPIYHRDI 193
+ T+ L+ + +H + L E L T + L L+ A + HRD+
Sbjct: 68 V-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DVY 252
K N+L++ K+ADFG ++ + T ++ T Y P+ S+ + D++
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 253 SFGVVLVELLTGKKPIFS 270
S G + E++ G P+F
Sbjct: 186 SVGCIFAEMVNG-TPLFP 202
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 48/288 (16%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKLEEFIN 120
KE + + + V +LG GG G+VY G+ + D +A+K + D EL
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 121 EIVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRI 169
E+V+L +++ V++LL LE P+ L D E L E+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFD-FITERGALQEELARSF 119
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKI 228
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T
Sbjct: 120 FWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDF 173
Query: 229 QGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------------------- 214
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 215 ----EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVK--KFKLAVDDEELLKLEEFINEIVILSQIN 129
F++ R++G+G V L+ RI A+K K +L DDE++ ++ E + Q +
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQ---TEKHVFEQAS 67
Query: 130 HRNVVKLLGCCLETEVPLLHLHDH--------HRNEEFPLTWEIRLRIATEVAGALSYLH 181
+ + L C +TE L + ++ H + L E + E++ AL+YLH
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 182 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
I +RD+K N+LLD K+ D+G K + T+ GT Y+ PE +
Sbjct: 128 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 242 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
D ++ GV++ E++ G+ P G++ +
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 220
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H LG+G G+V Y + ++ G ++AVK+ + + D++ +F EI IL
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILK 66
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
++ +VK G +P L D + L L ++++
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 126
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--VTTKIQGTFGY 234
+ YL S HRD+ + NIL++ K+ADFG +K + +D+ + V Q +
Sbjct: 127 MEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
PE + + +SDV+SFGVVL EL T
Sbjct: 184 YAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H LG+G G+V Y + ++ G ++AVK+ + + D++ +F EI IL
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILK 79
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
++ +VK G +P L D + L L ++++
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 139
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--VTTKIQGTFGY 234
+ YL S HRD+ + NIL++ K+ADFG +K + +D+ + V Q +
Sbjct: 140 MEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
PE + + +SDV+SFGVVL EL T
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 77 RILGQGGQGTVYKGMLED---GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
R LGQG G VY+G D G K + L + EF+NE ++ +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 134 VKLLGCCLETEVPL--LHLHDHHRNEEF---------------PLTWEIRLRIATEVAGA 176
V+LLG + + L + L H + + P T + +++A E+A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYL 235
++YL++ HR++ + N ++ + K+ DFG ++ I D K ++
Sbjct: 143 MAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLT 263
PE + T SD++SFGVVL E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 19/211 (9%)
Query: 73 FNVNRILGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHR 131
+ V +G G G K DG+I+ K+ E ++ ++E+ +L ++ H
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHP 65
Query: 132 NVVKLLGCCLETEVPLLHLHDHH-------------RNEEFPLTWEIRLRIATEVAGALS 178
N+V+ ++ L++ + E L E LR+ T++ AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 179 YLH--SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
H S + HRD+K N+ LD + K+ DFG ++ + D T GT Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMS 184
Query: 237 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 267
PE +KSD++S G +L EL P
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 72 HFNVNRILGQGGQGTV----YKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
H LG+G G+V Y + ++ G ++AVK+ + + D++ +F EI IL
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILK 67
Query: 127 QINHRNVVKLLGCCLETE----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
++ +VK G +P L D + L L ++++
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--VTTKIQGTFGY 234
+ YL S HRD+ + NIL++ K+ADFG +K + +D+ + V Q +
Sbjct: 128 MEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLT 263
PE + + +SDV+SFGVVL EL T
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 77 RILGQGGQGTVYKGMLED---GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
R LGQG G VY+G D G K + L + EF+NE ++ +V
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 134 VKLLGCCLETEVPL--LHLHDHHRNEEF---------------PLTWEIRLRIATEVAGA 176
V+LLG + + L + L H + + P T + +++A E+A
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYL 235
++YL++ HR++ + N ++ + K+ DFG ++ I D K ++
Sbjct: 144 MAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 236 EPEYHQSSQLTDKSDVYSFGVVLVELLT 263
PE + T SD++SFGVVL E+ +
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 164 EIRLRI-ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 222
E R R A E+A AL YLHS I +RD+K NILLD + + DFG K ++
Sbjct: 138 EPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHN 193
Query: 223 HVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
T+ GT YL PE D + G VL E+L G P +S NT++
Sbjct: 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-NTAE 246
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A E+ L +LHS I +RD+K NILLD+ K+ADFG K + T
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFC 179
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
GT Y+ PE + D +SFGV+L E+L G+ P G +E HS+
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEE-------LFHSI 230
Query: 290 RKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNG--KKRPTMEEVTME 338
R ++ + + K K + F E+ L + G ++ P E+ E
Sbjct: 231 RMDNPF--YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE 279
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 62/302 (20%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLE-DGRIM--AVKKFK-LAVDDEELLKLEEFINEIVILS 126
N ++G+G G V K ++ DG M A+K+ K A D+ +F E+ +L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH----RDFAGELEVLC 77
Query: 127 QINHR-NVVKLLGCC-------LETE-VPLLHLHDHHRN----EEFP-----------LT 162
++ H N++ LLG C L E P +L D R E P L+
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 163 WEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 222
+ L A +VA + YL + HR++ + NIL+ E Y AK+ADFG S+ Q
Sbjct: 138 SQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQE 190
Query: 223 HVTTKIQGTFG--YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
K G ++ E S T SDV+S+GV+L E I S G T ++
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE-------IVSLGGTPYCGMT 243
Query: 281 LAAFFVHSMRKNHMYDIL--DDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTME 338
A + + + L DD+V L+++ C +RP+ ++ +
Sbjct: 244 CAELYEKLPQGYRLEKPLNCDDEVYDLMRQ------------CWREKPYERPSFAQILVS 291
Query: 339 LN 340
LN
Sbjct: 292 LN 293
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 47/239 (19%)
Query: 71 NHFNVNRILGQGGQGTVYK----GML--EDGRIMAVKKFKLAVDDEELLKLEEFINEIVI 124
N+ R +G+G G V++ G+L E ++AVK K ++ +F E +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK---EEASADMQADFQREAAL 103
Query: 125 LSQINHRNVVKLLGCCLETEVPLLHLHDHHRN---EEF---------------------- 159
+++ ++ N+VKLLG C + P+ L ++ EF
Sbjct: 104 MAEFDNPNIVKLLGVCAVGK-PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 160 -------PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG 212
PL+ +L IA +VA ++YL + HRD+ + N L+ E K+ADFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFG 219
Query: 213 TSKFI-AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIF 269
S+ I + D ++ PE ++ T +SDV+++GVVL E+ + G +P +
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 95 GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLGCCLETE---------- 144
G ++AVK K + L+ + EI IL + H ++VK GCC +
Sbjct: 37 GEMVAVKALKEGCGPQ--LR-SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 145 VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERY 204
VPL L D+ L L A ++ ++YLH+ HR + + N+LLD
Sbjct: 94 VPLGSLRDYLPRHCVGLA--QLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDR 148
Query: 205 RAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLEPEYHQSSQLTDKSDVYSFGVVLVEL 261
K+ DFG +K + + + G F Y PE + + SDV+SFGV L EL
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYEL 207
Query: 262 LT 263
LT
Sbjct: 208 LT 209
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 66/299 (22%)
Query: 77 RILGQGGQGT-VYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI-NHRNVV 134
+ILG G GT V++G + GR +AVK+ + D L+ EI +L++ +H NV+
Sbjct: 21 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALM-------EIKLLTESDDHPNVI 72
Query: 135 KLLGCCLET---------EVPLLHLHD-----HHRNEEFPLTWEIR-LRIATEVAGALSY 179
+ C ET E+ L+L D + +E L E + + ++A +++
Sbjct: 73 RYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 180 LHSAASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQTHVTT 226
LHS I HRD+K NIL+ E R ++DFG K + Q+ T
Sbjct: 131 LHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 227 KIQ---GTFGYLEPEYHQSS-------QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+ GT G+ PE + S +LT D++S G V +L+ K F + +
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 277 ENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
N+ F + M+ H ++ I +L + +D + KRPT +V
Sbjct: 248 SNIIRGIFSLDEMKCLH-------------DRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 49/254 (19%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML--EDGR----IMAVKKFKLAVD 108
+D K+ + + + + + LG+G G V K GR +AVK K
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 109 DEELLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHR------------- 155
EL + ++E +L Q+NH +V+KL G C + PLL + ++ +
Sbjct: 67 PSEL---RDLLSEFNVLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRK 122
Query: 156 -------------------NEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKST 196
+E LT + A +++ + YL A + HRD+ +
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAAR 179
Query: 197 NILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYHQSSQLTDKSDVYSF 254
NIL+ E + K++DFG S+ + + + V + QG ++ E T +SDV+SF
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 255 GVVLVELLT-GKKP 267
GV+L E++T G P
Sbjct: 239 GVLLWEIVTLGGNP 252
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 49/254 (19%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGML--EDGR----IMAVKKFKLAVD 108
+D K+ + + + + + LG+G G V K GR +AVK K
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 109 DEELLKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHR------------- 155
EL + ++E +L Q+NH +V+KL G C + PLL + ++ +
Sbjct: 67 PSEL---RDLLSEFNVLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRK 122
Query: 156 -------------------NEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKST 196
+E LT + A +++ + YL A + HRD+ +
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAAR 179
Query: 197 NILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLEPEYHQSSQLTDKSDVYSF 254
NIL+ E + K++DFG S+ + + + V + QG ++ E T +SDV+SF
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 255 GVVLVELLT-GKKP 267
GV+L E++T G P
Sbjct: 239 GVLLWEIVTLGGNP 252
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 95 GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLGCCLETE---------- 144
G ++AVK K + L+ + EI IL + H ++VK GCC +
Sbjct: 38 GEMVAVKALKEGCGPQ--LR-SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 145 VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERY 204
VPL L D+ L L A ++ ++YLH+ HR + + N+LLD
Sbjct: 95 VPLGSLRDYLPRHCVGLA--QLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDR 149
Query: 205 RAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLEPEYHQSSQLTDKSDVYSFGVVLVEL 261
K+ DFG +K + + + G F Y PE + + SDV+SFGV L EL
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYEL 208
Query: 262 LT 263
LT
Sbjct: 209 LT 210
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G GTV+K E I+A+K+ +L DDE + + EI +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP--SSALREICLLKELKHKNIVRLH 67
Query: 138 GCCLETEVPL---LHLHDHHRNEEFP-----LTWEIRLRIATEVAGALSYLHSAASSPIY 189
L ++ L D + F L EI ++ L + HS +
Sbjct: 68 DV-LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VL 123
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRD+K N+L++ K+ADFG ++ + + ++ T Y P+ ++L S
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTS 182
Query: 250 -DVYSFGVVLVELLTGKKPIFSTGNTSQE 277
D++S G + EL +P+F + +
Sbjct: 183 IDMWSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 48/281 (17%)
Query: 71 NHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKLEEFINEIVILSQ 127
+ + V +LG GG G+VY G+ + D +A+K + D EL E+V+L +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 128 INH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
++ V++LL LE P+ L D E L E+ +V A
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEELARSFFWQVLEA 122
Query: 177 LSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T GT Y
Sbjct: 123 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYS 176
Query: 236 EPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE+ + + +S V+S G++L +++ G P H
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----------------------EHD 213
Query: 295 YDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+I+ QV ++ +L CL L RPT EE+
Sbjct: 214 EEIIGGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G + +AVK K + ++ F+ E ++ + H +V+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYA 75
Query: 139 CCLETEVPLLHLHDH----------HRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPI 188
E P+ + ++ +E + + + ++A ++Y+
Sbjct: 76 VVTREE-PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---Y 131
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ N+L+ E K+ADFG ++ I ++ + + PE T K
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 249 SDVYSFGVVLVELLT-GKKP 267
SDV+SFG++L E++T GK P
Sbjct: 192 SDVWSFGILLYEIVTYGKIP 211
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 124/299 (41%), Gaps = 52/299 (17%)
Query: 75 VNRILGQGGQGTVYK----GMLED--GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ + LG+G G V G+ +D R+ V K+ D L + I+E+ ++ I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVA-VKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 129 N-HRNVVKLLGCC---------------------LETEVP--LLHLHDHHRNEEFPLTWE 164
H+N++ LLG C L+ P L + N E L+ +
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 165 IRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 223
+ A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 283
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 260
Query: 284 FFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
F +++ H D N + C +RPT +++ +L+ I
Sbjct: 261 LF-KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ G + +AVK K + ++ F+ E ++ + H +V+L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 139 CCLETEVPLL---------HLHDHHRNEEFPLTWEIRL-RIATEVAGALSYLHSAASSPI 188
+ E P+ L D +++E +L + ++A ++Y+
Sbjct: 75 VVTKEE-PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---Y 130
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ N+L+ E K+ADFG ++ I ++ + + PE T K
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 249 SDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFVHSMR--KNHMYDIL 298
S+V+SFG++L E++T GK P N + + + M + +YDI+
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIM 243
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 120/287 (41%), Gaps = 48/287 (16%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKLEEFINE 121
E + + + V +LG GG G+VY G+ + D +A+K + D EL E
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 60
Query: 122 IVILSQINH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIA 170
+V+L +++ V++LL LE P+ L D E L E+
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEELARSFF 119
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T
Sbjct: 120 WQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFD 173
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHS 288
GT Y PE+ + + +S V+S G++L +++ G P
Sbjct: 174 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-------------------- 213
Query: 289 MRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
H +I+ QV ++ +L CL L RPT EE+
Sbjct: 214 ---EHDEEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 19/211 (9%)
Query: 73 FNVNRILGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHR 131
+ V +G G G K DG+I+ K+ E ++ ++E+ +L ++ H
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHP 65
Query: 132 NVVKLLGCCLETEVPLLHLHDHH-------------RNEEFPLTWEIRLRIATEVAGALS 178
N+V+ ++ L++ + E L E LR+ T++ AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 179 YLH--SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
H S + HRD+K N+ LD + K+ DFG ++ + D+ + GT Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYMS 184
Query: 237 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 267
PE +KSD++S G +L EL P
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 26/222 (11%)
Query: 66 LDKATNHFNVNRILGQGGQGTVYKG--MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
L +A + +G+G G V+K + GR +A+K+ ++ EE + L I E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLST-IREVA 63
Query: 124 ILSQIN---HRNVVKLLGCCL------ETEVPLLHLHDHH-------RNEEFPLTWEIRL 167
+L + H NVV+L C ET++ L+ H + E + E
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 227
+ ++ L +LHS + HRD+K NIL+ + K+ADFG ++ + T
Sbjct: 124 DMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 228 IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
+ T Y PE S D++S G + E+ +KP+F
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 48/281 (17%)
Query: 71 NHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKLEEFINEIVILSQ 127
+ + V +LG GG G+VY G+ + D +A+K + D EL E+V+L +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 128 INH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
++ V++LL LE P+ L D E L E+ +V A
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEELARSFFWQVLEA 122
Query: 177 LSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T GT Y
Sbjct: 123 VRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYS 176
Query: 236 EPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE+ + + +S V+S G++L +++ G P H
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----------------------EHD 213
Query: 295 YDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+I+ QV ++ +L CL L RPT EE+
Sbjct: 214 EEIIRGQV--FFRQRVSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 48/281 (17%)
Query: 71 NHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFK--LAVDDEELLKLEEFINEIVILSQ 127
+ + V +LG GG G+VY G+ + D +A+K + D EL E+V+L +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 128 INH--RNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGA 176
++ V++LL LE P+ L D E L E+ +V A
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD-FITERGALQEELARSFFWQVLEA 122
Query: 177 LSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T GT Y
Sbjct: 123 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYS 176
Query: 236 EPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE+ + + +S V+S G++L +++ G P H
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----------------------EHD 213
Query: 295 YDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+I+ QV ++ +L CL L RPT EE+
Sbjct: 214 EEIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 53/227 (23%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINH 130
+ +++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDH 85
Query: 131 RNVVKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
N+V+L L ET V + H + P+ + ++L +
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-Y 142
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
++ +L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 143 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----- 194
Query: 231 TFGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 195 ---YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 237
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVK--KFKLAVDDEELLKLEEFINEIVILSQIN 129
F++ R++G+G V L+ RI A++ K +L DDE++ ++ E + Q +
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQ---TEKHVFEQAS 110
Query: 130 HRNVVKLLGCCLETEVPLLHLHDH--------HRNEEFPLTWEIRLRIATEVAGALSYLH 181
+ + L C +TE L + ++ H + L E + E++ AL+YLH
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 182 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
I +RD+K N+LLD K+ D+G K + T+ GT Y+ PE +
Sbjct: 171 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILR 226
Query: 242 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
D ++ GV++ E++ G+ P G++ +
Sbjct: 227 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 263
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 53/227 (23%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINH 130
+ +++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDH 100
Query: 131 RNVVKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
N+V+L L ET V + H + P+ + ++L +
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYMY- 157
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
++ +L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 158 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----- 209
Query: 231 TFGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 210 ---YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 252
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 53/224 (23%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 75
Query: 134 VKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVA 174
V+L L ET V + H + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYMY-QLF 132
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 233
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-------- 181
Query: 234 YLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 41/219 (18%)
Query: 72 HFNVNRILGQGGQGTVYKGMLE----DGRIMAVKKFKLAVDDEEL--LKLEEFINEIVIL 125
H R+L G+G K L GR +A+K +D +L L++ E+ I+
Sbjct: 10 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK----IIDKTQLNPTSLQKLFREVRIM 65
Query: 126 SQINHRNVVKLLGCCLETEVPLL-------------HLHDHHRNEEFPLTWEIRLRIATE 172
+NH N+VKL +ETE L +L H R +E + R +
Sbjct: 66 KILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----Q 119
Query: 173 VAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ--- 229
+ A+ Y H I HRD+K+ N+LLD K+ADFG S ++ V K+
Sbjct: 120 IVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDTFC 171
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 267
G+ Y PE Q + DV+S GV+L L++G P
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 53/227 (23%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINH 130
+ +++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDH 106
Query: 131 RNVVKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
N+V+L L ET V + H + P+ + ++L +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-Y 163
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
++ +L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 164 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----- 215
Query: 231 TFGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 216 ---YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 53/227 (23%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINH 130
+ +++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDH 151
Query: 131 RNVVKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
N+V+L L ET V + H + P+ + ++L +
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYMY- 208
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
++ +L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 209 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----- 260
Query: 231 TFGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 261 ---YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 303
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 53/227 (23%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINH 130
+ +++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDH 110
Query: 131 RNVVKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
N+V+L L ET V + H + P+ + ++L +
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-Y 167
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
++ +L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 168 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----- 219
Query: 231 TFGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 220 ---YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 262
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 19/219 (8%)
Query: 73 FNVNRILGQGGQGTVYK----GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
F + R+LG+GG G V++ G+I A+K K A+ E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWE--------IRLRIATEVAGALSYL 180
H +V L+ +T L + ++ E + E E++ AL +L
Sbjct: 79 KHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYH 240
H I +RD+K NI+L+ + K+ DFG K D T VT GT Y+ PE
Sbjct: 138 HQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEIL 193
Query: 241 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 279
S D +S G ++ ++LTG P TG ++ +
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPF--TGENRKKTI 230
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 53/224 (23%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNI 75
Query: 134 VKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVA 174
V+L L ET V + H + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-YQLF 132
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 233
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-------- 181
Query: 234 YLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 53/227 (23%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINH 130
+ +++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDH 108
Query: 131 RNVVKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
N+V+L L ET V + H + P+ + ++L +
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-Y 165
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
++ +L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 166 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----- 217
Query: 231 TFGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 218 ---YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 260
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VYK E G + A K + ++E LE++I EI IL+ +H +VKLL
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----LEDYIVEIEILATCDHPYIVKLL 74
Query: 138 GC-------------CLETEVPLLHLH-DHHRNEEFPLTWEIRLRIATEVAGALSYLHSA 183
G C V + L D E +I++ + ++ AL++LHS
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-----QIQV-VCRQMLEALNFLHSK 128
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K+ N+L+ ++ADFG S + GT ++ PE
Sbjct: 129 R---IIHRDLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 244 QLTD-----KSDVYSFGVVLVELLTGKKP 267
+ D K+D++S G+ L+E+ + P
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 72 HFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK---LEEFINEIVILSQI 128
H R+L G+G K L I+ K+ + + D+ L L++ E+ I+ +
Sbjct: 5 HIGNYRLLKTIGKGNFAKVKLAR-HILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL 63
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRNEEF-----PLTW----EIRLRIATEVAGALSY 179
NH N+VKL +ETE L + ++ E W E R + ++ A+ Y
Sbjct: 64 NHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF-RQIVSAVQY 121
Query: 180 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEY 239
H I HRD+K+ N+LLD K+ADFG S T G+ Y PE
Sbjct: 122 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPEL 176
Query: 240 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDIL 298
Q + DV+S GV+L L++G P F N + L + + Y
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKE----LRERVLRGKYRIPFYMST 231
Query: 299 DDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHK 350
D + NL ++ L LN KR T+E++ + R N GH+
Sbjct: 232 DCE--------------NLLKKFLILNPSKRGTLEQIMKD----RWMNVGHE 265
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 26/222 (11%)
Query: 66 LDKATNHFNVNRILGQGGQGTVYKG--MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
L +A + +G+G G V+K + GR +A+K+ ++ EE + L I E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLST-IREVA 63
Query: 124 ILSQIN---HRNVVKLLGCCL------ETEVPLLHLHDHH-------RNEEFPLTWEIRL 167
+L + H NVV+L C ET++ L+ H + E + E
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 227
+ ++ L +LHS + HRD+K NIL+ + K+ADFG ++ + T
Sbjct: 124 DMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 228 IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
+ T Y PE S D++S G + E+ +KP+F
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 53/227 (23%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINH 130
+ +++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDH 77
Query: 131 RNVVKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
N+V+L L ET V + H + P+ + ++L +
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-Y 134
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
++ +L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 135 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----- 186
Query: 231 TFGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 187 ---YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 53/224 (23%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNI 75
Query: 134 VKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVA 174
V+L L ET V + H + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-YQLF 132
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 233
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS-------- 181
Query: 234 YLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 19/219 (8%)
Query: 73 FNVNRILGQGGQGTVYK----GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
F + R+LG+GG G V++ G+I A+K K A+ E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWE--------IRLRIATEVAGALSYL 180
H +V L+ +T L + ++ E + E E++ AL +L
Sbjct: 79 KHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYH 240
H I +RD+K NI+L+ + K+ DFG K D T VT GT Y+ PE
Sbjct: 138 HQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEIL 193
Query: 241 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 279
S D +S G ++ ++LTG P TG ++ +
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPF--TGENRKKTI 230
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGMLEDGR----IMAVKKFKL-----AVDDEELLK 114
KE ++F V R LG G G V ++G I +KK + + D++ + K
Sbjct: 30 KEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEK 88
Query: 115 L-EEFINEIVILSQINHRNVVKLLGCCLETEVPLL------------HLHDHHRNEEFPL 161
EE NEI +L ++H N++KL + + L + + H+ +E
Sbjct: 89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDA 148
Query: 162 TWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER---YRAKVADFGTSKFIA 218
I ++ + YLH I HRDIK NILL+ + K+ DFG S F +
Sbjct: 149 A-----NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 219 MDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 267
D + GT Y+ PE + + +K DV+S GV++ LL G P
Sbjct: 201 KD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 96/219 (43%), Gaps = 41/219 (18%)
Query: 72 HFNVNRILGQGGQGTVYKGMLE----DGRIMAVKKFKLAVDDEEL--LKLEEFINEIVIL 125
H R+L G+G K L GR +A+K +D +L L++ E+ I+
Sbjct: 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK----IIDKTQLNPTSLQKLFREVRIM 68
Query: 126 SQINHRNVVKLLGCCLETEVPLL-------------HLHDHHRNEEFPLTWEIRLRIATE 172
+NH N+VKL +ETE L +L H R +E + R +
Sbjct: 69 KILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----Q 122
Query: 173 VAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ--- 229
+ A+ Y H I HRD+K+ N+LLD K+ADFG S ++ V K+
Sbjct: 123 IVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDAFC 174
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 267
G Y PE Q + DV+S GV+L L++G P
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 26/222 (11%)
Query: 66 LDKATNHFNVNRILGQGGQGTVYKG--MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
L +A + +G+G G V+K + GR +A+K+ ++ EE + L I E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLST-IREVA 63
Query: 124 ILSQIN---HRNVVKLLGCCL------ETEVPLLHLHDHH-------RNEEFPLTWEIRL 167
+L + H NVV+L C ET++ L+ H + E + E
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 227
+ ++ L +LHS + HRD+K NIL+ + K+ADFG ++ + T
Sbjct: 124 DMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTS 178
Query: 228 IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
+ T Y PE S D++S G + E+ +KP+F
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 20/258 (7%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
K+ + + ++ +LG G V + ED R + K + K NEI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 124 ILSQINHRNVVKL-----LGCCLETEVPLL---HLHDHHRNEEFPLTWEIRLRIATEVAG 175
+L +I H N+V L G L + L+ L D + F T R+ +V
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLD 127
Query: 176 ALSYLHSAASSPIYHRDIKSTNIL---LDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+L LDE + ++DFG SK D V + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ-ENVSLAAFFVHSMRK 291
GY+ PE + D +S GV+ LL G P + + E + A + S
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 292 NHMYDILDDQVVKLVKKN 309
+ + D D + L++K+
Sbjct: 243 DDISDSAKDFIRHLMEKD 260
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G VYK E G + A K + ++E LE++I EI IL+ +H +VKLL
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----LEDYIVEIEILATCDHPYIVKLL 82
Query: 138 GC-------------CLETEVPLLHLH-DHHRNEEFPLTWEIRLRIATEVAGALSYLHSA 183
G C V + L D E +I++ + ++ AL++LHS
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-----QIQV-VCRQMLEALNFLHSK 136
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K+ N+L+ ++ADFG S + GT ++ PE
Sbjct: 137 R---IIHRDLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 244 QLTD-----KSDVYSFGVVLVELLTGKKP 267
+ D K+D++S G+ L+E+ + P
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 42/237 (17%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAV----------DDEELL 113
KE DK N + + R L QG + +D + A+KK++ ++ +++++
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKIS 82
Query: 114 ---KLEEFINEIVILSQINHRNVVKLLGCCLE-TEVPLLHLH---------DHH-----R 155
K ++F NE+ I++ I + + G EV +++ + D + +
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 156 NEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK 215
N + ++ I V + SY+H+ + I HRD+K +NIL+D+ R K++DFG S+
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 216 FIAMDQTHVTTKIQ---GTFGYLEPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKP 267
++ V KI+ GT+ ++ PE+ ++SS K D++S G+ L + P
Sbjct: 201 YM------VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 20/258 (7%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
K+ + + ++ +LG G V + ED R + K + K NEI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 124 ILSQINHRNVVKL-----LGCCLETEVPLL---HLHDHHRNEEFPLTWEIRLRIATEVAG 175
+L +I H N+V L G L + L+ L D + F T R+ +V
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLD 127
Query: 176 ALSYLHSAASSPIYHRDIKSTNIL---LDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+L LDE + ++DFG SK D V + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ-ENVSLAAFFVHSMRK 291
GY+ PE + D +S GV+ LL G P + + E + A + S
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 292 NHMYDILDDQVVKLVKKN 309
+ + D D + L++K+
Sbjct: 243 DDISDSAKDFIRHLMEKD 260
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 20/258 (7%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
K+ + + ++ +LG G V + ED R + K + K NEI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 124 ILSQINHRNVVKL-----LGCCLETEVPLL---HLHDHHRNEEFPLTWEIRLRIATEVAG 175
+L +I H N+V L G L + L+ L D + F T R+ +V
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLD 127
Query: 176 ALSYLHSAASSPIYHRDIKSTNIL---LDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+L LDE + ++DFG SK D V + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ-ENVSLAAFFVHSMRK 291
GY+ PE + D +S GV+ LL G P + + E + A + S
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 292 NHMYDILDDQVVKLVKKN 309
+ + D D + L++K+
Sbjct: 243 DDISDSAKDFIRHLMEKD 260
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 39/217 (17%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 75
Query: 134 VKL----LGCCLETEVPLLHL--------------HDHHRNEEFPLTWEIRLRIATEVAG 175
V+L + +V L+L H + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMY-QLFR 133
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 234
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 188
Query: 235 LEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H H + F LT I + + L L S + HRD
Sbjct: 68 DVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 186
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 187 WSLGCIFAEMVT 198
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 121/296 (40%), Gaps = 52/296 (17%)
Query: 72 HFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK---LEEFINEIVILSQI 128
H R+L G+G K L I+ K+ + + D+ L L++ E+ I+ +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLAR-HILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL 70
Query: 129 NHRNVVKLLGCCLETEVPLL-------------HLHDHHRNEEFPLTWEIRLRIATEVAG 175
NH N+VKL +ETE L +L H R +E + R ++
Sbjct: 71 NHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
A+ Y H I HRD+K+ N+LLD K+ADFG S T G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYA 179
Query: 236 EPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE Q + DV+S GV+L L++G P F N + L + +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKE----LRERVLRGKYRIPF 234
Query: 295 YDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHK 350
Y D + NL ++ L LN KR T+E++ + R N GH+
Sbjct: 235 YMSTDCE--------------NLLKKFLILNPSKRGTLEQIMKD----RWMNVGHE 272
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 121/296 (40%), Gaps = 52/296 (17%)
Query: 72 HFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK---LEEFINEIVILSQI 128
H R+L G+G K L I+ K+ + + D+ L L++ E+ I+ +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLAR-HILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL 70
Query: 129 NHRNVVKLLGCCLETEVPLL-------------HLHDHHRNEEFPLTWEIRLRIATEVAG 175
NH N+VKL +ETE L +L H R +E + R ++
Sbjct: 71 NHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
A+ Y H I HRD+K+ N+LLD K+ADFG S T G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYA 179
Query: 236 EPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE Q + DV+S GV+L L++G P F N + L + +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKE----LRERVLRGKYRIPF 234
Query: 295 YDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHK 350
Y D + NL ++ L LN KR T+E++ + R N GH+
Sbjct: 235 YMSTDCE--------------NLLKKFLILNPSKRGTLEQIMKD----RWMNVGHE 272
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 27/201 (13%)
Query: 79 LGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G V+K D G+I+A+KKF + DD + K+ + EI +L Q+ H N+V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA--LREIRMLKQLKHPNLVNLL 68
Query: 138 GC-------------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAA 184
C T +LH D ++ + + I + A+++ H
Sbjct: 69 EVFRRKRRLHLVFEYCDHT---VLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHN 122
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYH-QSS 243
HRD+K NIL+ + K+ DFG ++ + + ++ T Y PE +
Sbjct: 123 C---IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDT 178
Query: 244 QLTDKSDVYSFGVVLVELLTG 264
Q DV++ G V ELL+G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 37/192 (19%)
Query: 95 GRIMAVKKFKLAVDDEEL--LKLEEFINEIVILSQINHRNVVKLLGCCLETEVPLL---- 148
GR +AVK +D +L L++ E+ I+ +NH N+VKL +ETE L
Sbjct: 40 GREVAVK----IIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV-IETEKTLYLVME 94
Query: 149 ---------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNIL 199
+L H R +E + R ++ A+ Y H I HRD+K+ N+L
Sbjct: 95 YASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKY---IVHRDLKAENLL 146
Query: 200 LDERYRAKVADFGTSKFIAMDQTHVTTKIQ---GTFGYLEPEYHQSSQLTDKS-DVYSFG 255
LD K+ADFG S ++ V K+ G+ Y PE Q + DV+S G
Sbjct: 147 LDGDMNIKIADFGFS-----NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 201
Query: 256 VVLVELLTGKKP 267
V+L L++G P
Sbjct: 202 VILYTLVSGSLP 213
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 38/285 (13%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFIN 120
K+ D+ ++ ++ +G GG V + G ++A+K +L +++
Sbjct: 1 GPKDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIK---T 57
Query: 121 EIVILSQINHRNVVKLLGCCLETE---------VPLLHLHDHHRNEEFPLTWEIRLRIAT 171
EI L + H+++ +L LET P L D+ +++ E R+ +
Sbjct: 58 EIEALKNLRHQHICQLYHV-LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFR 115
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
++ A++Y+HS + HRD+K N+L DE ++ K+ DFG ++ + G+
Sbjct: 116 QIVSAVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGS 172
Query: 232 FGYLEPEYHQS-SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMR 290
Y PE Q S L ++DV+S G++L L+ G P ++ ++ A + MR
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF--------DDDNVMALYKKIMR 224
Query: 291 KNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
YD V K + + I+ L ++ L ++ KKR +M+ +
Sbjct: 225 GK--YD-----VPKWLSPSSIL----LLQQMLQVDPKKRISMKNL 258
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 127/295 (43%), Gaps = 62/295 (21%)
Query: 77 RILGQGGQGT-VYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI-NHRNVV 134
+ILG G GT V++G + GR +AVK+ + D L+ EI +L++ +H NV+
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALM-------EIKLLTESDDHPNVI 90
Query: 135 KLLGCCLET---------EVPLLHLHD-----HHRNEEFPLTWEIR-LRIATEVAGALSY 179
+ C ET E+ L+L D + +E L E + + ++A +++
Sbjct: 91 RYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 180 LHSAASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQTHVTT 226
LHS I HRD+K NIL+ E R ++DFG K + Q
Sbjct: 149 LHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 227 KIQ---GTFGYLEPEYHQSS---QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
+ GT G+ PE + S +LT D++S G V +L+ K F + + N+
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 281 LAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
F + M+ H ++ I +L + +D + KRPT +V
Sbjct: 266 RGIFSLDEMKCLH-------------DRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 41/218 (18%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 75
Query: 134 VKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVA 174
V+L L ET V + H + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYMY-QLF 132
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 233
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY- 187
Query: 234 YLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
Y PE ++ T DV+S G VL ELL G +PIF
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 121/296 (40%), Gaps = 52/296 (17%)
Query: 72 HFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK---LEEFINEIVILSQI 128
H R+L G+G K L I+ K+ + + D+ L L++ E+ I+ +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLAR-HILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL 70
Query: 129 NHRNVVKLLGCCLETEVPLL-------------HLHDHHRNEEFPLTWEIRLRIATEVAG 175
NH N+VKL +ETE L +L H R +E + R ++
Sbjct: 71 NHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
A+ Y H I HRD+K+ N+LLD K+ADFG S T G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYA 179
Query: 236 EPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE Q + DV+S GV+L L++G P F N + L + +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKE----LRERVLRGKYRIPF 234
Query: 295 YDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHK 350
Y D + NL ++ L LN KR T+E++ + R N GH+
Sbjct: 235 YMSTDCE--------------NLLKKFLILNPSKRGTLEQIMKD----RWMNVGHE 272
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 41/218 (18%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 94
Query: 134 VKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVA 174
V+L L ET V + H + P+ + ++L + ++
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-YQLF 151
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 233
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I +
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY- 206
Query: 234 YLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
Y PE ++ T DV+S G VL ELL G +PIF
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 243
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 39/217 (17%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNI 75
Query: 134 VKL---------------LGCCLE---TEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
V+L L L+ V + H + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-VKLYM-YQLFR 133
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 234
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 188
Query: 235 LEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 41/218 (18%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 76
Query: 134 VKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVA 174
V+L L ET V + H + P+ + ++L + ++
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYMY-QLF 133
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 233
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I +
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY- 188
Query: 234 YLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
Y PE ++ T DV+S G VL ELL G +PIF
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 225
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 41/218 (18%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 87
Query: 134 VKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVA 174
V+L L ET V + H + P+ + ++L + ++
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYMY-QLF 144
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 233
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY- 199
Query: 234 YLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
Y PE ++ T DV+S G VL ELL G +PIF
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 236
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 41/221 (18%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINH 130
+ +++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDH 84
Query: 131 RNVVKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
N+V+L L ET V + H + P+ + ++L +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-Y 141
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
++ +L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I
Sbjct: 142 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICS 197
Query: 231 TFGYLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
+ Y PE ++ T DV+S G VL ELL G +PIF
Sbjct: 198 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 236
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 127/295 (43%), Gaps = 62/295 (21%)
Query: 77 RILGQGGQGT-VYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI-NHRNVV 134
+ILG G GT V++G + GR +AVK+ + D L+ EI +L++ +H NV+
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALM-------EIKLLTESDDHPNVI 90
Query: 135 KLLGCCLET---------EVPLLHLHD-----HHRNEEFPLTWEIR-LRIATEVAGALSY 179
+ C ET E+ L+L D + +E L E + + ++A +++
Sbjct: 91 RYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 180 LHSAASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQTHVTT 226
LHS I HRD+K NIL+ E R ++DFG K + Q
Sbjct: 149 LHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 227 KIQ---GTFGYLEPEYHQSS---QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
+ GT G+ PE + S +LT D++S G V +L+ K F + + N+
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 281 LAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
F + M+ H ++ I +L + +D + KRPT +V
Sbjct: 266 RGIFSLDEMKCLH-------------DRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 41/218 (18%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 75
Query: 134 VKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVA 174
V+L L ET V + H + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-YQLF 132
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 233
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY- 187
Query: 234 YLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
Y PE ++ T DV+S G VL ELL G +PIF
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 62 SSKELDKATNHFNVN-----RILGQGGQGTVYKGMLEDGRIMAVKK--FKLAVDDEELLK 114
SS D T HF ++ R LG+G G VY + + K FK ++ E +
Sbjct: 9 SSGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE- 67
Query: 115 LEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEF-----PLTWEIRLRI 169
+ EI I + ++H N+++L + L L R E + T++ + R
Sbjct: 68 -HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQ-RT 125
Query: 170 AT---EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 226
AT E+A AL Y H + HRDIK N+LL + K+ADFG S H +
Sbjct: 126 ATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWS-------VHAPS 175
Query: 227 ----KIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 274
+ GT YL PE + +K D++ GV+ ELL G P S +
Sbjct: 176 LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHN 227
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 41/221 (18%)
Query: 73 FNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINH 130
+ +++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDH 106
Query: 131 RNVVKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
N+V+L L ET V + H + P+ + ++L +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-Y 163
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
++ +L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I
Sbjct: 164 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICS 219
Query: 231 TFGYLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
+ Y PE ++ T DV+S G VL ELL G +PIF
Sbjct: 220 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 258
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 41/218 (18%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 83
Query: 134 VKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVA 174
V+L L ET V + H + P+ + ++L + ++
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-YQLF 140
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 233
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I +
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY- 195
Query: 234 YLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
Y PE ++ T DV+S G VL ELL G +PIF
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 41/218 (18%)
Query: 76 NRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNV 133
+++G G G VY+ L D G ++A+KK +L+ + F N E+ I+ +++H N+
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 79
Query: 134 VKL-------------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVA 174
V+L L ET V + H + P+ + ++L + ++
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIY-VKLYM-YQLF 136
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 233
+L+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I +
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY- 191
Query: 234 YLEPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
Y PE ++ T DV+S G VL ELL G +PIF
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 228
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 121/296 (40%), Gaps = 52/296 (17%)
Query: 72 HFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK---LEEFINEIVILSQI 128
H R+L G+G K L I+ K+ + + D+ L L++ E+ I+ +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLAR-HILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL 70
Query: 129 NHRNVVKLLGCCLETEVPLL-------------HLHDHHRNEEFPLTWEIRLRIATEVAG 175
NH N+VKL +ETE L +L H R +E + R ++
Sbjct: 71 NHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
A+ Y H I HRD+K+ N+LLD K+ADFG S + G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYA 179
Query: 236 EPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE Q + DV+S GV+L L++G P F N + L + +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKE----LRERVLRGKYRIPF 234
Query: 295 YDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHK 350
Y D + NL ++ L LN KR T+E++ + R N GH+
Sbjct: 235 YMSTDCE--------------NLLKKFLILNPSKRGTLEQIMKD----RWMNVGHE 272
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 28/184 (15%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI--AMDQTHVTTKIQ 229
++ L Y+HSA + HRD+K +N+L++ K+ DFG ++ D T T+
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFST--------------GNT 274
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 267
Query: 275 SQENVSLAAFFVHSMRKNHMYDILDDQVV---KLVKKNQIMAFANLAERCLDLNGKKRPT 331
SQE+++ ++ +N++ + V KL K+ A +L +R L N KR T
Sbjct: 268 SQEDLNC---IINMKARNYLQSLPSKTKVAWAKLFPKSDSKAL-DLLDRMLTFNPNKRIT 323
Query: 332 MEEV 335
+EE
Sbjct: 324 VEEA 327
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 54/259 (20%)
Query: 78 ILGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKL 136
++G GG G V+K DG+ +K+ K + E E+ L++++H N+V
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE--------REVKALAKLDHVNIVHY 69
Query: 137 LGC---------------------CLETEVP------LLHLHDHHRNEEFPLTWEIRLRI 169
GC CL ++ L + R E+ + L +
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV--LALEL 127
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
++ + Y+HS + +RD+K +NI L + + K+ DFG + D +K
Sbjct: 128 FEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK-- 182
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
GT Y+ PE S + D+Y+ G++L ELL F T + FF +
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKFFT-DL 231
Query: 290 RKNHMYDILDDQVVKLVKK 308
R + DI D + L++K
Sbjct: 232 RDGIISDIFDKKEKTLLQK 250
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G GTV+K E I+A+K+ +L DDE + + EI +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP--SSALREICLLKELKHKNIVRLH 67
Query: 138 GCCLETEVPL---LHLHDHHRNEEFP-----LTWEIRLRIATEVAGALSYLHSAASSPIY 189
L ++ L D + F L EI ++ L + HS +
Sbjct: 68 DV-LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VL 123
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRD+K N+L++ K+A+FG ++ + + ++ T Y P+ ++L S
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTS 182
Query: 250 -DVYSFGVVLVELLTGKKPIFSTGNTSQE 277
D++S G + EL +P+F + +
Sbjct: 183 IDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 107/258 (41%), Gaps = 20/258 (7%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
K+ + + ++ +LG G V + ED R + K K NEI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 68
Query: 124 ILSQINHRNVVKL-----LGCCLETEVPLL---HLHDHHRNEEFPLTWEIRLRIATEVAG 175
+L +I H N+V L G L + L+ L D + F T R+ +V
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLD 127
Query: 176 ALSYLHSAASSPIYHRDIKSTNIL---LDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+L LDE + ++DFG SK D V + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ-ENVSLAAFFVHSMRK 291
GY+ PE + D +S GV+ LL G P + + E + A + S
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 292 NHMYDILDDQVVKLVKKN 309
+ + D D + L++K+
Sbjct: 243 DDISDSAKDFIRHLMEKD 260
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 118/296 (39%), Gaps = 52/296 (17%)
Query: 72 HFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK---LEEFINEIVILSQI 128
H R+L G+G K L I+ K+ + + D+ L L++ E+ I +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLAR-HILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVL 70
Query: 129 NHRNVVKLLGCCLETEVPLL-------------HLHDHHRNEEFPLTWEIRLRIATEVAG 175
NH N+VKL +ETE L +L H R +E + R ++
Sbjct: 71 NHPNIVKLFEV-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----QIVS 124
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
A+ Y H I HRD+K+ N+LLD K+ADFG S G Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYA 179
Query: 236 EPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHM 294
PE Q + DV+S GV+L L++G P F N + L + +
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKE----LRERVLRGKYRIPF 234
Query: 295 YDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGIRGSNFGHK 350
Y D + NL ++ L LN KR T+E++ + R N GH+
Sbjct: 235 YXSTDCE--------------NLLKKFLILNPSKRGTLEQIXKD----RWXNVGHE 272
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
+E D + ++G+G G VY G G + A++ + D+E+ LK F E++
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWH-GEV-AIRLIDIERDNEDQLK--AFKREVM 81
Query: 124 ILSQINHRNVVKLLGCCLETEVPLLH----------LHDHHRNEEFPLTWEIRLRIATEV 173
Q H NVV +G C+ P L L+ R+ + L +IA E+
Sbjct: 82 AYRQTRHENVVLFMGACMSP--PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 139
Query: 174 AGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG---TSKFIAMDQTHVTTKIQ- 229
+ YLH+ I H+D+KS N+ D + + DFG S + + +IQ
Sbjct: 140 VKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQN 195
Query: 230 GTFGYLEPE-YHQSSQLTDK--------SDVYSFGVVLVELLTGKKP---------IFST 271
G +L PE Q S T++ SDV++ G + EL + P I+
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM 255
Query: 272 GNTSQENVS 280
G + N+S
Sbjct: 256 GTGMKPNLS 264
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 118/290 (40%), Gaps = 62/290 (21%)
Query: 73 FNVNRILGQGGQGTVYKG-MLEDGRIMAVKKFKLAVDDEELLKLEEFIN------EIVIL 125
+ + +LG+GG GTV+ G L D +A+K + +L + E+ +L
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIK----VIPRNRVLGWSPLSDSVTCPLEVALL 88
Query: 126 SQIN----HRNVVKLLGC---------CLETEVPLLHLHDHHRNEEFPLTWEIRLRIATE 172
++ H V++LL LE +P L D+ E+ PL +
Sbjct: 89 WKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDY-ITEKGPLGEGPSRCFFGQ 147
Query: 173 VAGALSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
V A+ + HS + HRDIK NIL+D R AK+ DFG+ + D+ + T GT
Sbjct: 148 VVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPY--TDFDGT 201
Query: 232 FGYLEPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHS 288
Y PE+ HQ L + V+S G++L +++ G P QE + F
Sbjct: 202 RVYSPPEWISRHQYHAL--PATVWSLGILLYDMVCGDIPF----ERDQEILEAELHFPAH 255
Query: 289 MRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTME 338
+ + L RCL RP++EE+ ++
Sbjct: 256 VSPD---------------------CCALIRRCLAPKPSSRPSLEEILLD 284
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 72 HFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLK---LEEFINEIVILSQI 128
H R+L G+G K L I+ K+ + + D+ L L++ E+ I+ +
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLAR-HILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL 70
Query: 129 NHRNVVKLLGCCLETEVPLL-------------HLHDHHRNEEFPLTWEIRLRIATEVAG 175
NH N+VKL +ETE L +L H R +E + R ++
Sbjct: 71 NHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
A+ Y H I HRD+K+ N+LLD K+ADFG S G Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYA 179
Query: 236 EPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 267
PE Q + DV+S GV+L L++G P
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 34/233 (14%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQ 127
AT+ + +G G GTVYK G +A+K ++ + EE L + + E+ +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPIST-VREVALLRR 59
Query: 128 IN---HRNVVKLLGCCL------ETEVPLL--HLHDHHRN--EEFP---LTWEIRLRIAT 171
+ H NVV+L+ C E +V L+ H+ R ++ P L E +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKF----IAMDQTHVTTK 227
+ L +LH+ I HRD+K NIL+ K+ADFG ++ +A+D V
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--- 173
Query: 228 IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
T Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 174 ---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQLG 221
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 72/175 (41%), Gaps = 17/175 (9%)
Query: 156 NEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK 215
N + P W R A EV AL +HS HRD+K N+LLD+ K+ADFGT
Sbjct: 167 NYDVPEKW-ARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM 221
Query: 216 FIAMDQTHVTTKIQGTFGYLEPEYHQS----SQLTDKSDVYSFGVVLVELLTGKKPIFST 271
+ + GT Y+ PE +S + D +S GV L E+L G P ++
Sbjct: 222 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 281
Query: 272 GNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNG 326
SL + M + DD + KN I AF E L NG
Sbjct: 282 --------SLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG 328
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQ 127
AT+ + +G G GTVYK G +A+K ++ + EE L + + E+ +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPIST-VREVALLRR 59
Query: 128 IN---HRNVVKLLGCCL------ETEVPLL--HLHDHHRN--EEFP---LTWEIRLRIAT 171
+ H NVV+L+ C E +V L+ H+ R ++ P L E +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
+ L +LH+ I HRD+K NIL+ K+ADFG ++ + + T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--T 174
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQLG 221
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S++NH
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKLNH 93
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 94 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 205
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 127/299 (42%), Gaps = 66/299 (22%)
Query: 77 RILGQGGQGT-VYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI-NHRNVV 134
+ILG G GT V++G + GR +AVK+ + D L+ EI +L++ +H NV+
Sbjct: 21 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALM-------EIKLLTESDDHPNVI 72
Query: 135 KLLGCCLET---------EVPLLHLHD-----HHRNEEFPLTWEIR-LRIATEVAGALSY 179
+ C ET E+ L+L D + +E L E + + ++A +++
Sbjct: 73 RYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 180 LHSAASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQTHVTT 226
LHS I HRD+K NIL+ E R ++DFG K + Q
Sbjct: 131 LHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 227 KIQ---GTFGYLEPEYHQSS-------QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+ GT G+ PE + S +LT D++S G V +L+ K F + +
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 277 ENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
N+ F + M+ H ++ I +L + +D + KRPT +V
Sbjct: 248 SNIIRGIFSLDEMKCLH-------------DRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 35/247 (14%)
Query: 83 GQGTVYKGML----EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
G+G+ K +L EDGR +K+ ++ + + EE E+ +L+ + H N+V+
Sbjct: 33 GEGSFGKAILVKSTEDGRQYVIKEINISRMSSK--EREESRREVAVLANMKHPNIVQYRE 90
Query: 139 CCLETEVPLLHLHDHHR----------------NEEFPLTWEIRLRIATEVAGALSYLHS 182
E L + D+ E+ L W +++ +A L ++H
Sbjct: 91 S-FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVHD 143
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
I HRDIKS NI L + ++ DFG ++ + + GT YL PE ++
Sbjct: 144 RK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICEN 199
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRKNHMYDILDDQV 302
+KSD+++ G VL EL T K F G+ + + + + ++ YD L V
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKH-AFEAGSMKNLVLKIISGSFPPVSLHYSYD-LRSLV 257
Query: 303 VKLVKKN 309
+L K+N
Sbjct: 258 SQLFKRN 264
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 93
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 94 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MAQDIYRASYYRKGGC 205
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 74/176 (42%), Gaps = 19/176 (10%)
Query: 156 NEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK 215
N + P W R A EV AL +HS HRD+K N+LLD+ K+ADFGT
Sbjct: 167 NYDVPEKW-ARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM 221
Query: 216 FIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFS 270
+ + GT Y+ PE + SQ D + D +S GV L E+L G P ++
Sbjct: 222 KMNKEGMVRCDTAVGTPDYISPEVLK-SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
Query: 271 TGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNG 326
SL + M + DD + KN I AF E L NG
Sbjct: 281 D--------SLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG 328
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S++NH
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKLNH 107
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 108 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 219
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 74/176 (42%), Gaps = 19/176 (10%)
Query: 156 NEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSK 215
N + P W R A EV AL +HS HRD+K N+LLD+ K+ADFGT
Sbjct: 162 NYDVPEKW-ARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM 216
Query: 216 FIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFS 270
+ + GT Y+ PE + SQ D + D +S GV L E+L G P ++
Sbjct: 217 KMNKEGMVRCDTAVGTPDYISPEVLK-SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275
Query: 271 TGNTSQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNG 326
SL + M + DD + KN I AF E L NG
Sbjct: 276 D--------SLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG 323
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 77 RILGQGGQGTVY--KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVV 134
+LG G V+ K L G++ A+K + + NEI +L +I H N+V
Sbjct: 15 EVLGSGAFSEVFLVKQRL-TGKLFALK----CIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 135 KLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLR-------IATEVAGALSYLHSAASSP 187
L T L + E F E + + +V A+ YLH
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG--- 126
Query: 188 IYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
I HRD+K N+L +E + + DFG SK M+Q + + GT GY+ PE
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIF 269
+ D +S GV+ LL G P +
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFY 208
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQ 127
AT+ + +G G GTVYK G +A+K ++ + EE L + + E+ +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPIST-VREVALLRR 59
Query: 128 IN---HRNVVKLLGCCL------ETEVPLL--HLHDHHRN--EEFP---LTWEIRLRIAT 171
+ H NVV+L+ C E +V L+ H+ R ++ P L E +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
+ L +LH+ I HRD+K NIL+ K+ADFG ++ + + T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--T 174
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQLG 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 25/221 (11%)
Query: 62 SSKELDKAT-NHFNVNRILGQGGQGTVY----KGMLEDGRIMAVKKFKLAVDDEELLKLE 116
S LD+ FN +LG+G G V KG E I +KK + DD+ +E
Sbjct: 9 PSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDD----VE 64
Query: 117 EFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR---------- 166
+ E +L+ ++ + L C +T L + ++ + L + I+
Sbjct: 65 CTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGD--LMYHIQQVGKFKEPQA 122
Query: 167 LRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 226
+ A E++ L +LH I +RD+K N++LD K+ADFG K MD T
Sbjct: 123 VFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-TTR 178
Query: 227 KIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 267
+ GT Y+ PE D +++GV+L E+L G+ P
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 20/197 (10%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCC-LETEVPLLHLHDHHRNEEF---------PLTWEIRLRIATEVAGALSYLHSAASSP 187
E ++ L+ H ++F PL I+ + + G LS+ HS
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQG-LSFCHSHR--- 123
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTD 247
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y PE +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYS 182
Query: 248 KS-DVYSFGVVLVELLT 263
+ D++S G + E++T
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 99
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 100 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 158
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 159 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 211
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 212 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 258
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 42/225 (18%)
Query: 73 FNVNRILGQGGQGTVY--KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
F + LG+GG G V+ K ++D A+K+ +L + EL + E+ + E+ L+++ H
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNY-AIKRIRLP--NRELAR-EKVMREVKALAKLEH 62
Query: 131 RNVVKLLGCCLETEV--------PLLHLHDHHR--NEEFPLTW------------EIRLR 168
+V+ LE P ++L+ + +E W + L
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--- 225
I ++A A+ +LHS + HRD+K +NI KV DFG + D+ T
Sbjct: 123 IFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 226 --------TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELL 262
T GT Y+ PE + + K D++S G++L ELL
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 119
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 120 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 178
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 179 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 231
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 232 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 278
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 92
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 93 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 152 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 204
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 84
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 85 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 143
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 144 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 196
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 197 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 243
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 93
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 94 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 205
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 109
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 110 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 168
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 169 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 221
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 222 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 268
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 92
Query: 131 RNVVKLLGCCLETEVPLLHLHD---------------HHRNEEFPLTWEIRLRIATEVAG 175
+N+V+ +G L++ +P L + ++ L L +A ++A
Sbjct: 93 QNIVRCIGVSLQS-LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 152 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 204
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ +AVK K + +E F+ E ++ + H +VKL
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHA 77
Query: 139 CCLETEVPLL-------HLHDHHRNEEF---PLTWEIRLRIATEVAGALSYLHSAASSPI 188
+ + ++ L D +++E PL + + ++A ++++
Sbjct: 78 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---Y 132
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ K+ADFG ++ I ++ + + PE T K
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 249 SDVYSFGVVLVELLT-GKKPIFSTGNT 274
SDV+SFG++L+E++T G+ P N
Sbjct: 193 SDVWSFGILLMEIVTYGRIPYPGMSNP 219
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 187
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 188
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 189 WSLGCIFAEMVT 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 187
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 186
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 187 WSLGCIFAEMVT 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 75
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 76 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 136 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 194
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 195 WSLGCIFAEMVT 206
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 107
Query: 131 RNVVKLLGCCLETEVPLLHLHD---------------HHRNEEFPLTWEIRLRIATEVAG 175
+N+V+ +G L++ +P L + ++ L L +A ++A
Sbjct: 108 QNIVRCIGVSLQS-LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 219
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 186
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 187 WSLGCIFAEMVT 198
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-I 228
A E+A L +L S I +RD+K N++LD K+ADFG K D VTTK
Sbjct: 127 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXF 181
Query: 229 QGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
GT Y+ PE D ++FGV+L E+L G+ P
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDI 187
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 75
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 76 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 136 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDI 194
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 195 WSLGCIFAEMVT 206
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL---DFLMEALIISKFNH 107
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 108 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 219
Query: 233 G-----YLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 108/270 (40%), Gaps = 63/270 (23%)
Query: 78 ILGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKL 136
++G GG G V+K DG+ +++ K + E E+ L++++H N+V
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE--------REVKALAKLDHVNIVHY 70
Query: 137 LGCC------LETEVPLLHLHDHH----RNEEFPLT-----------------W-EIR-- 166
GC ET L D+ +N T W E R
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 167 --------LRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA 218
L + ++ + Y+HS + HRD+K +NI L + + K+ DFG +
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 219 MDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
D T+ +GT Y+ PE S + D+Y+ G++L ELL F T
Sbjct: 188 NDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET------- 238
Query: 279 VSLAAFFVHSMRKNHMYDILDDQVVKLVKK 308
+ FF +R + DI D + L++K
Sbjct: 239 ---SKFFT-DLRDGIISDIFDKKEKTLLQK 264
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 72
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 73 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 132
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 133 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 191
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 192 WSLGCIFAEMVT 203
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 133
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 134 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQG-T 231
YL HRDI + N LL AK+ DFG ++ I +
Sbjct: 193 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 249
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 292
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 77 RILGQGGQGTVYKG----MLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQINH 130
R LG G G VY+G M D + AVK +++ L +F+ E +I+S+ NH
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNH 110
Query: 131 RNVVKLLGCCLETEVP---LLHLHDHHRNEEFPLTWEIR------------LRIATEVAG 175
+N+V+ +G L++ +P LL L + F R L +A ++A
Sbjct: 111 QNIVRCIGVSLQS-LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 169
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQG-T 231
YL HRDI + N LL AK+ DFG ++ I +
Sbjct: 170 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 226
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 273
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 269
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 60/298 (20%)
Query: 77 RILGQGGQGTVYK----GMLEDGRIM--AVKKFKLAVDDEELLKLEEFINEIVILSQI-N 129
++LG G G V G+ + G + AVK K D E E ++E+ +++Q+ +
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER---EALMSELKMMTQLGS 107
Query: 130 HRNVVKLLGCC-LETEVPLLHLHDHH---------RNEEFP------------------- 160
H N+V LLG C L + L+ + + + E+F
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 161 -LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 219
LT+E L A +VA + +L + HRD+ + N+L+ K+ DFG ++ I
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 220 DQTHVT-TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
D +V + ++ PE T KSDV+S+G++L E IFS G
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE-------IFSLGVNPYPG 277
Query: 279 VSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVT 336
+ + A F ++ DQ ++ I + + C + +KRP+ +T
Sbjct: 278 IPVDANFYKLIQNGFKM----DQPFYATEEIYI-----IMQSCWAFDSRKRPSFPNLT 326
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLR--------- 168
++E+ +L Q++H N++KL + L + + E F EI LR
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFD---EIILRQKFSEVDAA 107
Query: 169 -IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHV 224
I +V +YLH I HRD+K N+LL+ + R K+ DFG S V
Sbjct: 108 VIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-----EV 159
Query: 225 TTKIQ---GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
K++ GT Y+ PE + + +K DV+S GV+L LL G P G T QE
Sbjct: 160 GGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF--GGQTDQE 212
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 164 EIRLRI-ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 222
E R R E+ AL YLHS + + +RD+K N++LD+ K+ DFG K D
Sbjct: 250 EDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 307
Query: 223 HVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
+ T GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 308 TMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 354
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-I 228
A E+A L +L S I +RD+K N++LD K+ADFG K D VTTK
Sbjct: 448 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXF 502
Query: 229 QGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 268
GT Y+ PE D ++FGV+L E+L G+ P
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 164 EIRLRI-ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 222
E R R E+ AL YLHS + + +RD+K N++LD+ K+ DFG K D
Sbjct: 247 EDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304
Query: 223 HVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
+ T GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 305 TMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ +AVK K + +E F+ E ++ + H +VKL
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHA 250
Query: 139 CCLETEV----------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPI 188
+ + LL + PL + + ++A ++++
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---Y 305
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ K+ADFG ++ I ++ + + PE T K
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 249 SDVYSFGVVLVELLT-GKKPIFSTGNT 274
SDV+SFG++L+E++T G+ P N
Sbjct: 366 SDVWSFGILLMEIVTYGRIPYPGMSNP 392
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V++G+ G +AVK F + D++ + E N +++ H N++ +
Sbjct: 16 VGKGRYGEVWRGLWH-GESVAVKIFS-SRDEQSWFRETEIYNTVLL----RHDNILGFIA 69
Query: 139 CCL-----ETEVPLL-HLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLH-----SA 183
+ T++ L+ H H+H +F L + LR+A A L++LH +
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV---TTKIQGTFGYLEPEYH 240
I HRD KS N+L+ + +AD G + + ++ GT Y+ PE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 241 QSSQLTD------KSDVYSFGVVLVEL 261
TD +D+++FG+VL E+
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLE-EFINEIVILS 126
AT+ + +G G GTVYK G +A+K ++ L + E+ +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 127 QIN---HRNVVKLLGCCL------ETEVPLL--HLHDHHRN--EEFP---LTWEIRLRIA 170
++ H NVV+L+ C E +V L+ H+ R ++ P L E +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 171 TEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 230
+ L +LH+ I HRD+K NIL+ K+ADFG ++ + T +
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPVVV 181
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
T Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQLG 229
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLR--------- 168
++E+ +L Q++H N++KL + L + + E F EI LR
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFD---EIILRQKFSEVDAA 124
Query: 169 -IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHV 224
I +V +YLH I HRD+K N+LL+ + R K+ DFG S V
Sbjct: 125 VIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-----EV 176
Query: 225 TTKIQ---GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
K++ GT Y+ PE + + +K DV+S GV+L LL G P G T QE
Sbjct: 177 GGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF--GGQTDQE 229
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 122/288 (42%), Gaps = 57/288 (19%)
Query: 73 FNVNRILGQGGQGT-VYKGMLEDGRIMAVKK-----FKLAVDDEELLKLEEFINEIVILS 126
F +LG G +GT VY+GM D R +AVK+ F A + +LL+ +
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESD--------- 75
Query: 127 QINHRNVVKLLGCCLET---------EVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
H NV++ C E E+ L ++ ++F + + + L
Sbjct: 76 --EHPNVIRYF--CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGL 131
Query: 178 SYLHSAASSPIYHRDIKSTNILLD-----ERYRAKVADFGTSKFIAMDQTHVTTK--IQG 230
++LHS I HRD+K NIL+ + +A ++DFG K +A+ + + + + G
Sbjct: 132 AHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPG 188
Query: 231 TFGYLEPEYHQSSQLTDKS---DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVH 287
T G++ PE + + D++S G V +++ F Q N+ L A +
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLD 248
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEV 335
+ D++ +++ E+ + ++ +KRP+ + V
Sbjct: 249 CLHPEKHEDVIARELI---------------EKMIAMDPQKRPSAKHV 281
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
E+ AL YLHS + +RDIK N++LD+ K+ DFG K D + T
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FC 166
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
E+ AL YLHS + +RDIK N++LD+ K+ DFG K D + T
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FC 166
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
E+ AL YLHS + +RDIK N++LD+ K+ DFG K D + T
Sbjct: 114 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FC 169
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 210
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 130 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 130 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 140 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 237
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 137 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 234
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 138 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 235
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 129 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 226
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 129 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 187
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 26/200 (13%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCCLETEVPLLHLHDHHRNE-------------EFPLTWEIRLRIATEVAGALSYLHSAA 184
+ TE L + +H + PL I+ + + G L++ HS
Sbjct: 72 DV-IHTENKLYLVFEHVDQDLKKFMDASALTGIPLPL---IKSYLFQLLQG-LAFCHSHR 126
Query: 185 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 245 LTDKS-DVYSFGVVLVELLT 263
+ D++S G + E++T
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ KVADFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 186
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 187 WSLGCIFAEMVT 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 188
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 189 WSLGCIFAEMVT 200
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 35/173 (20%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFST--------------GNT 274
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 249
Query: 275 SQENVSLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMA---FANLAERCLDL 324
SQE+++ ++ +N++ + L KN++ F N + LDL
Sbjct: 250 SQEDLNCG---INLKARNYL--------LSLPHKNKVPWNRLFPNADSKALDL 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 71 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 131 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 189
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 190 WSLGCIFAEMVT 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+ K +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 187
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+ K +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + T ++ T Y PE + + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 186
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 187 WSLGCIFAEMVT 198
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 187
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 187
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 68 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 186
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 187 WSLGCIFAEMVT 198
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 187
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 72 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 190
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 191 WSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 71 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 131 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 189
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 190 WSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 187
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 71 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 131 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 189
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 190 WSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 72 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 190
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 191 WSLGCIFAEMVT 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 72
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 73 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 132
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 133 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 191
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 192 WSLGCIFAEMVT 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 188
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 189 WSLGCIFAEMVT 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H ++F LT I + + L L S + HRD
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 130 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 188
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 189 WSLGCIFAEMVT 200
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 77 RILGQGGQGTVYKG-MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVK 135
R+LG+GG G V+ M G++ A KK ++ + + E IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKK-LNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 136 LLGCCLETEVPL-----------LHLHDHHRNEEFPLTWEIRLRIAT-EVAGALSYLHSA 183
L ET+ L + H ++ +E+ P E R T ++ L +LH
Sbjct: 250 L-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I +RD+K N+LLD+ +++D G + + QT T GT G++ PE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGE 364
Query: 244 QLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
+ D ++ GV L E++ + P + G
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 77 RILGQGGQGTVYKG-MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVK 135
R+LG+GG G V+ M G++ A KK ++ + + E IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKK-LNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 136 LLGCCLETEVPL-----------LHLHDHHRNEEFPLTWEIRLRIAT-EVAGALSYLHSA 183
L ET+ L + H ++ +E+ P E R T ++ L +LH
Sbjct: 250 L-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I +RD+K N+LLD+ +++D G + + QT T GT G++ PE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGE 364
Query: 244 QLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
+ D ++ GV L E++ + P + G
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 77 RILGQGGQGTVYKG-MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVK 135
R+LG+GG G V+ M G++ A KK ++ + + E IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKK-LNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 136 LLGCCLETEVPL-----------LHLHDHHRNEEFPLTWEIRLRIAT-EVAGALSYLHSA 183
L ET+ L + H ++ +E+ P E R T ++ L +LH
Sbjct: 250 L-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I +RD+K N+LLD+ +++D G + + QT T GT G++ PE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGE 364
Query: 244 QLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
+ D ++ GV L E++ + P + G
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 77 RILGQGGQGTVYKG-MLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVK 135
R+LG+GG G V+ M G++ A KK ++ + + E IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKK-LNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 136 LLGCCLETEVPL-----------LHLHDHHRNEEFPLTWEIRLRIAT-EVAGALSYLHSA 183
L ET+ L + H ++ +E+ P E R T ++ L +LH
Sbjct: 250 L-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I +RD+K N+LLD+ +++D G + + QT T GT G++ PE
Sbjct: 309 N---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGE 364
Query: 244 QLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
+ D ++ GV L E++ + P + G
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 34/225 (15%)
Query: 70 TNHFNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
++ F + +LG+G G V + G I+A+KK + D+ L L + EI IL
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRT-LREIKILKHF 66
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG------------- 175
H N++ + ++ + ++ + +E + ++ I+T++
Sbjct: 67 KHENIITIFN--IQRPDSFENFNEVYIIQEL-MQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTF 232
A+ LH S + HRD+K +N+L++ KV DFG ++ I A D + T + G
Sbjct: 124 AVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 233 GYLEPEYHQ-------SSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
Y+ +++ S++ + DV+S G +L EL ++PIF
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
E+ AL YLHS + +RDIK N++LD+ K+ DFG K +
Sbjct: 116 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC 171
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 212
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
E+ AL YLHS + +RDIK N++LD+ K+ DFG K +
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC 166
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 73 FNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
F R LG G G V+ ++E+ + K D + +E+ EI +L ++H N
Sbjct: 24 FIFKRKLGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 133 VVKL-------------LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSY 179
++K+ + C E+ + R + L+ + ++ AL+Y
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA--LSEGYVAELMKQMMNALAY 139
Query: 180 LHSAASSPIYHRDIKSTNILLDE---RYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
HS + H+D+K NIL + K+ DFG ++ D+ +T GT Y+
Sbjct: 140 FHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMA 194
Query: 237 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
PE + +T K D++S GVV+ LLTG P TG + +E
Sbjct: 195 PEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPF--TGTSLEE 232
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 70 TNHFNVNRILGQGGQGTVY------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
++ + R+LG+G G V G ++++ ++ K D E LL+ E+
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR------EVQ 84
Query: 124 ILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR-------LRIATEVAGA 176
+L Q++H N++KL + L + E F + RI +V
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 144
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFG 233
++Y+H + I HRD+K N+LL+ + + ++ DFG S + + KI GT
Sbjct: 145 ITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAY 199
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
Y+ PE + +K DV+S GV+L LL+G P F+ N
Sbjct: 200 YIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP-FNGAN 237
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
A+S+LH+ + I HRD+K NILLD+ + +++DFG S ++ ++ GT GYL
Sbjct: 212 AVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPGEKLRELCGTPGYL 266
Query: 236 EPEYHQSSQ------LTDKSDVYSFGVVLVELLTGKKPIF 269
PE + S + D+++ GV+L LL G P +
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW 306
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 57/295 (19%)
Query: 79 LGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
LG+ G VYKG L E + +A+K K D E EEF +E ++ +++ H N
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK---DKAEGPLREEFRHEAMLRARLQHPN 73
Query: 133 VVKLLGCCLETEVPLL---------HLH---------------DHHRNEEFPLTWEIRLR 168
VV LLG + + PL LH D R + L +
Sbjct: 74 VVCLLGVVTKDQ-PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTK 227
+ ++A + YL +S + H+D+ + N+L+ ++ K++D G + + A D +
Sbjct: 133 LVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 228 IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAFFV 286
++ PE + + SD++S+GVVL E+ + G +P G ++Q+ V +
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY--CGYSNQDVVEM----- 242
Query: 287 HSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNG 341
I + QV+ +A + E C + +RP +++ L
Sbjct: 243 ----------IRNRQVLPCPDDCPAWVYALMIE-CWNEFPSRRPRFKDIHSRLRA 286
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 20/187 (10%)
Query: 161 LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 220
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I D
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 221 QTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 279
+V + ++ PE T +SDV+SFGV+L E IFS G + V
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPGV 299
Query: 280 SLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMEL 339
+ F +++ D ++ Q M C +RPT E+ L
Sbjct: 300 KIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQRPTFSELVEHL 350
Query: 340 NGIRGSN 346
+ +N
Sbjct: 351 GNLLQAN 357
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLL 148
L ++E+ IL I H NVV LLG C + PL+
Sbjct: 72 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLM 103
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 70 TNHFNVNRILGQGGQGTVY------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
++ + R+LG+G G V G ++++ ++ K D E LL+ E+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR------EVQ 78
Query: 124 ILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR-------LRIATEVAGA 176
+L Q++H N++KL + L + E F + RI +V
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFG 233
++Y+H + I HRD+K N+LL+ + + ++ DFG S + + KI GT
Sbjct: 139 ITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKI-GTAY 193
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
Y+ PE + +K DV+S GV+L LL+G P F+ N
Sbjct: 194 YIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP-FNGAN 231
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 20/187 (10%)
Query: 161 LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 220
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I D
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 221 QTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 279
+V + ++ PE T +SDV+SFGV+L E IFS G + V
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPGV 297
Query: 280 SLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMEL 339
+ F +++ D ++ Q M C +RPT E+ L
Sbjct: 298 KIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQRPTFSELVEHL 348
Query: 340 NGIRGSN 346
+ +N
Sbjct: 349 GNLLQAN 355
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLL 148
L ++E+ IL I H NVV LLG C + PL+
Sbjct: 70 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLM 101
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 41/235 (17%)
Query: 79 LGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRN 132
LG+ G VYKG L E + +A+K K D E EEF +E ++ +++ H N
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK---DKAEGPLREEFRHEAMLRARLQHPN 90
Query: 133 VVKLLGCCLETEVPLL---------HLH---------------DHHRNEEFPLTWEIRLR 168
VV LLG + + PL LH D R + L +
Sbjct: 91 VVCLLGVVTKDQ-PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTK 227
+ ++A + YL +S + H+D+ + N+L+ ++ K++D G + + A D +
Sbjct: 150 LVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 228 IQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSL 281
++ PE + + SD++S+GVVL E+ + G +P G ++Q+ V +
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY--CGYSNQDVVEM 259
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCC-LETEVPLLHLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHSAASSPIYHRD 192
E ++ L+ H + F LT I + + L L S + HRD
Sbjct: 72 DVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 193 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DV 251
+K N+L++ K+ADFG ++ + ++ T Y PE + + D+
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDI 190
Query: 252 YSFGVVLVELLT 263
+S G + E++T
Sbjct: 191 WSLGCIFAEMVT 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
E+ AL YLHS + +RDIK N++LD+ K+ DFG K +
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC 166
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 20/187 (10%)
Query: 161 LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 220
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I D
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 221 QTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 279
+V + ++ PE T +SDV+SFGV+L E IFS G + V
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPGV 304
Query: 280 SLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMEL 339
+ F +++ D ++ Q M C +RPT E+ L
Sbjct: 305 KIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQRPTFSELVEHL 355
Query: 340 NGIRGSN 346
+ +N
Sbjct: 356 GNLLQAN 362
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLL 148
L ++E+ IL I H NVV LLG C + PL+
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLM 108
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 164 EIRLRI-ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 222
E R R E+ AL YLHS + + +RD+K N++LD+ K+ DFG K D
Sbjct: 109 EDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 166
Query: 223 HVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 167 -TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 213
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 164 EIRLRI-ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 222
E R R E+ AL YLHS + + +RD+K N++LD+ K+ DFG K D
Sbjct: 107 EDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 164
Query: 223 HVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 165 -TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 211
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 164 EIRLRI-ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 222
E R R E+ AL YLHS + + +RD+K N++LD+ K+ DFG K D
Sbjct: 108 EDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 165
Query: 223 HVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 166 -TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 212
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 20/187 (10%)
Query: 161 LTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 220
LT E + + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I D
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 221 QTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 279
+V + ++ PE T +SDV+SFGV+L E IFS G + V
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPGV 306
Query: 280 SLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMEL 339
+ F +++ D ++ Q M C +RPT E+ L
Sbjct: 307 KIDEEFCRRLKEGTRMRAPDYTTPEMY---QTML------DCWHGEPSQRPTFSELVEHL 357
Query: 340 NGIRGSN 346
+ +N
Sbjct: 358 GNLLQAN 364
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------MLEDGRIMAVKKFKLAVDDEELLK 114
+ + + + + + + LG+G G V + R +AVK K E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLL 148
L ++E+ IL I H NVV LLG C + PL+
Sbjct: 79 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLM 110
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
E+ AL YLHS + +RDIK N++LD+ K+ DFG K +
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC 166
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 49/242 (20%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLE-EFI 119
S KE+D+ F V R+ GQG GTV G + G +A+KK + D E + +
Sbjct: 18 SRKEMDR----FQVERMAGQGTFGTVQLGKEKSTGMSVAIKK---VIQDPRFRNRELQIM 70
Query: 120 NEIVILSQINHRNVVKL----------------LGCCLETEVPLLH--LHDHHRNEEFPL 161
++ +L +H N+V+L L +E LH +++R + P
Sbjct: 71 QDLAVL---HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPP 127
Query: 162 TWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMD 220
I++ + ++ ++ LH + + + HRDIK N+L++E K+ DFG++K ++
Sbjct: 128 PILIKVFL-FQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS 185
Query: 221 QTHVTTKIQGTFGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGN 273
+ +V Y+ Y+++ +L T D++S G + E++ G +PIF N
Sbjct: 186 EPNV--------AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGDN 236
Query: 274 TS 275
++
Sbjct: 237 SA 238
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 34/225 (15%)
Query: 70 TNHFNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
++ F + +LG+G G V + G I+A+KK + D+ L L + EI IL
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRT-LREIKILKHF 66
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG------------- 175
H N++ + ++ + ++ + +E + ++ I+T++
Sbjct: 67 KHENIITIFN--IQRPDSFENFNEVYIIQEL-MQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTF 232
A+ LH S + HRD+K +N+L++ KV DFG ++ I A D + T + G
Sbjct: 124 AVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 233 GYLEPEYHQ-------SSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
++ +++ S++ + DV+S G +L EL ++PIF
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 70 TNHFNVNRILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
++ F + +LG+G G V + G I+A+KK + D+ L L + EI IL
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRT-LREIKILKHF 66
Query: 129 NHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG------------- 175
H N++ + ++ + ++ + +E + ++ I+T++
Sbjct: 67 KHENIITIFN--IQRPDSFENFNEVYIIQEL-MQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQG-- 230
A+ LH S + HRD+K +N+L++ KV DFG ++ I A D + T + G
Sbjct: 124 AVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 231 ----TFGYLEPEYH-QSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T Y PE S++ + DV+S G +L EL ++PIF
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 56/254 (22%)
Query: 70 TNHFNVNRILGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ + + ++G G G V + + + R++A+KK +D L+ + + EI IL+++
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED--LIDCKRILREIAILNRL 109
Query: 129 NHRNVVKLLGCCLETEVP-------LLHLHDHHRNEEF--PLTWEIRLRIATEVAGAL-- 177
NH +VVK+L + +V +L + D + F P+ + L I T + L
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLYNLLVG 168
Query: 178 -SYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ--------------- 221
Y+HSA I HRD+K N L+++ KV DFG ++ + +
Sbjct: 169 VKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 222 -----THVTTKIQGTFGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIF 269
H + G++ ++++ +L T+ DV+S G + ELL
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL------- 278
Query: 270 STGNTSQENVSLAA 283
N +ENV+ A
Sbjct: 279 ---NMIKENVAYHA 289
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E +P + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-MPGGDMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ KVADFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E +P + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-MPGGDMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ KVADFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 29/202 (14%)
Query: 85 GTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLGC---CL 141
G V+K L + +AVK F + D++ + E E+ L + H N+++ +G
Sbjct: 38 GCVWKAQLLN-EYVAVKIF--PIQDKQSWQNE---YEVYSLPGMKHENILQFIGAEKRGT 91
Query: 142 ETEVPLLHLHDHHRNEEFP-------LTWEIRLRIATEVAGALSYLHS-------AASSP 187
+V L + H ++W IA +A L+YLH
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA 151
Query: 188 IYHRDIKSTNILLDERYRAKVADFGTS-KFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLT 246
I HRDIKS N+LL A +ADFG + KF A T GT Y+ PE + +
Sbjct: 152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINF 211
Query: 247 DKS-----DVYSFGVVLVELLT 263
+ D+Y+ G+VL EL +
Sbjct: 212 QRDAFLRIDMYAMGLVLWELAS 233
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 70 TNHFNVNRILGQGGQGTVY------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
++ + R+LG+G G V G ++++ ++ K D E LL+ E+
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR------EVQ 101
Query: 124 ILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR-------LRIATEVAGA 176
+L Q++H N++KL + L + E F + RI +V
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 161
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFG 233
++Y+H + I HRD+K N+LL+ + + ++ DFG S + + KI GT
Sbjct: 162 ITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKI-GTAY 216
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
Y+ PE + +K DV+S GV+L LL+G P F+ N
Sbjct: 217 YIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP-FNGAN 254
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 70 TNHFNVNRILGQGGQGTVY------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
++ + R+LG+G G V G ++++ ++ K D E LL+ E+
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR------EVQ 102
Query: 124 ILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR-------LRIATEVAGA 176
+L Q++H N++KL + L + E F + RI +V
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 162
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFG 233
++Y+H + I HRD+K N+LL+ + + ++ DFG S + + KI GT
Sbjct: 163 ITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKI-GTAY 217
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
Y+ PE + +K DV+S GV+L LL+G P F+ N
Sbjct: 218 YIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP-FNGAN 255
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 160 PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 219
P+T E + + +VA + +L +S HRD+ + NILL E K+ DFG ++ I
Sbjct: 195 PITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 220 DQTHV-TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ +V + ++ PE + KSDV+S+GV+L E IFS G +
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWE-------IFSLGGSPYPG 304
Query: 279 VSLAAFFVHSMRKN 292
V + F +R+
Sbjct: 305 VQMDEDFCSRLREG 318
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKGML------EDGRIMAVKKFKLAVDDEELLK 114
+ + + + A + + LG+G G V + R +AVK K E
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 115 LEEFINEIVILSQINHR-NVVKLLGCCLETEVPLL 148
L + E+ IL+ I H NVV LLG C + PL+
Sbjct: 77 L---MTELKILTHIGHHLNVVNLLGACTKQGGPLM 108
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H +
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 229
++ L Y+HSA + HRD+K +N+LL+ K+ DFG ++ D H +
Sbjct: 137 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 230 GTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 270
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 234
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 138 GCCLETE-----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
+ TE + L D PL I+ + + G L++ HS
Sbjct: 70 DV-IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPL-IKSYLFQLLQG-LAFCHSHR-- 124
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLT 246
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 125 -VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 182
Query: 247 DKS-DVYSFGVVLVELLT 263
+ D++S G + E++T
Sbjct: 183 STAVDIWSLGCIFAEMVT 200
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 138 GCCLETE-----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
+ TE + L D PL I+ + + G L++ HS
Sbjct: 71 DV-IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPL-IKSYLFQLLQG-LAFCHSHR-- 125
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLT 246
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 126 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 183
Query: 247 DKS-DVYSFGVVLVELLT 263
+ D++S G + E++T
Sbjct: 184 STAVDIWSLGCIFAEMVT 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCCLETE-----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
+ TE + L D PL I+ + + G L++ HS
Sbjct: 72 DV-IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPL-IKSYLFQLLQG-LAFCHSHR-- 126
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLT 246
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 -VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 247 DKS-DVYSFGVVLVELLT 263
+ D++S G + E++T
Sbjct: 185 STAVDIWSLGCIFAEMVT 202
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS-----SQ 244
HRDIK NIL+D ++ADFG+ + D T ++ GT Y+ PE Q+ +
Sbjct: 198 HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGR 257
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D +S GV + E+L G+ P ++
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ KVADFG +K + T +
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLC 200
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 79 LGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G+G G VYK + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCCLETE-----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
+ TE + L D PL I+ + + G L++ HS
Sbjct: 72 DV-IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPL-IKSYLFQLLQG-LAFCHSHR-- 126
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLT 246
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 -VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 247 DKS-DVYSFGVVLVELLT 263
+ D++S G + E++T
Sbjct: 185 STAVDIWSLGCIFAEMVT 202
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTF 232
+++Y HS I HR++K N+LL + + K+ADFG + I ++ + GT
Sbjct: 140 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 194
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
GYL PE + + D+++ GV+L LL G P +
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 231
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS-----SQ 244
HRDIK N+LLD ++ADFG+ + D T ++ GT Y+ PE Q+ +
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 257
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D +S GV + E+L G+ P ++
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTF 232
+++Y HS I HR++K N+LL + + K+ADFG + I ++ + GT
Sbjct: 117 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 171
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
GYL PE + + D+++ GV+L LL G P +
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTF 232
+++Y HS I HR++K N+LL + + K+ADFG + I ++ + GT
Sbjct: 116 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 170
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
GYL PE + + D+++ GV+L LL G P +
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTF 232
+++Y HS I HR++K N+LL + + K+ADFG + I ++ + GT
Sbjct: 117 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 171
Query: 233 GYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
GYL PE + + D+++ GV+L LL G P +
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 208
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 67 DKATNHFNVNRILGQGGQGTVYKGMLEDG-RIMAVKKFKLAVDDEELLKLEEFINEIVIL 125
D ++ F V LG+G VY+ + + A+K K VD +++++ EI +L
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVR-----TEIGVL 102
Query: 126 SQINHRNVVKLLGCC-LETEVPLL-------HLHDHHRNEEFPLTWEIRLRIATEVAGAL 177
+++H N++KL TE+ L+ L D + + + ++ A+
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY-YSERDAADAVKQILEAV 161
Query: 178 SYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 234
+YLH I HRD+K N+L K+ADFG SK + + + + GT GY
Sbjct: 162 AYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVCGTPGY 216
Query: 235 LEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
PE + + D++S G++ LL G +P +
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY 251
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKLEEF---INEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL+E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E P + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-APGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+++D++ KV DFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLMIDQQGYIKVTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS-----SQ 244
HRDIK N+LLD ++ADFG+ + D T ++ GT Y+ PE Q+ +
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 273
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D +S GV + E+L G+ P ++
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETPFYA 299
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 18/202 (8%)
Query: 120 NEIVILSQINHRNVVKLLGCCLETE--------VPLLHLHDHHRNEEFPLTWEIRLRIAT 171
NEI +L +I H N+V L V L D + F T + +
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF-YTEKDASTLIR 127
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKI 228
+V A+ YLH I HRD+K N+L DE + ++DFG SK + V +
Sbjct: 128 QVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG--KGDVMSTA 182
Query: 229 QGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ-ENVSLAAFFVH 287
GT GY+ PE + D +S GV+ LL G P + ++ E + A +
Sbjct: 183 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFD 242
Query: 288 SMRKNHMYDILDDQVVKLVKKN 309
S + + D D + L++K+
Sbjct: 243 SPYWDDISDSAKDFIRNLMEKD 264
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 34/224 (15%)
Query: 70 TNH-FNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQ 127
+NH + ++ ILGQG V++G + G + A+K F + L ++ + E +L +
Sbjct: 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFN---NISFLRPVDVQMREFEVLKK 63
Query: 128 INHRNVVKLLGCCLETEV----------PLLHLHD--HHRNEEFPLTWEIRLRIATEVAG 175
+NH+N+VKL ET P L+ + + L L + +V G
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL----DERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
+++L I HR+IK NI+ D + K+ DFG ++ + D+ V+ + GT
Sbjct: 124 GMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGT 178
Query: 232 FGYLEPEYHQSSQLTDKS--------DVYSFGVVLVELLTGKKP 267
YL P+ ++ + L D++S GV TG P
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHV 224
RI +V ++Y+H I HRD+K NILL+ + + K+ DFG S + T +
Sbjct: 125 RIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 225 TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
+I GT Y+ PE + + +K DV+S GV+L LL+G P +
Sbjct: 181 KDRI-GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 30/196 (15%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 137 -LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDIK 194
L +E VP + H R E R A ++ YLHS + +RD+K
Sbjct: 116 NLYMVMEY-VPGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLD---LIYRDLK 169
Query: 195 STNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSF 254
N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 255 GVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 226 GVLIYEMAAGYPPFFA 241
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHV 224
RI +V ++Y+H I HRD+K NILL+ + + K+ DFG S + T +
Sbjct: 125 RIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 225 TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
+I GT Y+ PE + + +K DV+S GV+L LL+G P +
Sbjct: 181 KDRI-GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHV 224
RI +V ++Y+H I HRD+K NILL+ + + K+ DFG S + T +
Sbjct: 125 RIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 225 TTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 269
+I GT Y+ PE + + +K DV+S GV+L LL+G P +
Sbjct: 181 KDRI-GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKS 195
L +E VP + H R R A ++ YLHS + +RD+K
Sbjct: 115 NLYMVMEY-VPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 196 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFG 255
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 256 VVLVELLTGKKPIFS 270
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 116 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 168
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 225 LGVLIYEMAAGYPPFFA 241
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKS 195
L +E VP + H R R A ++ YLHS + +RD+K
Sbjct: 115 NLYMVMEY-VPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKP 169
Query: 196 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFG 255
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 256 VVLVELLTGKKPIFS 270
V++ E+ G P F+
Sbjct: 226 VLIYEMAAGYPPFFA 240
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 41 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 100
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 101 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 153
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 154 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWA 209
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 210 LGVLIYEMAAGYPPFFA 226
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 76 NRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL---EEFINEIVILSQINHRN 132
R LG+GG Y+ D + + K V LLK E+ EI I +++ +
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGK---VVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 133 VVKLLG-------------CCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSY 179
VV G C LL LH + P E R + + G + Y
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRS--LLELHKRRKAVTEP---EARYFMRQTIQG-VQY 157
Query: 180 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEY 239
LH+ + HRD+K N+ L++ K+ DFG + I D T + GT Y+ PE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEV 213
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGKKP 267
+ + D++S G +L LL GK P
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 38/215 (17%)
Query: 77 RILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFIN-EIVILSQINHRNVVK 135
+++G G G V++ L + +A+KK +L+ + F N E+ I+ + H NVV
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKK---------VLQDKRFKNRELQIMRIVKHPNVVD 96
Query: 136 L---------------LGCCLETEVPLLHLHDHHR---NEEFPLTWEIRLRIATEVAGAL 177
L L LE ++ H + P+ I+L + ++ +L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL-IKLYM-YQLLRSL 154
Query: 178 SYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
+Y+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 155 AYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX-ICSRY-YRA 209
Query: 237 PEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
PE ++ T D++S G V+ EL+ G +P+F
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQG-QPLFP 243
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 116 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 168
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 225 LGVLIYEMAAGYPPFFA 241
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 117 EFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEI--RLR------ 168
+ + E+ +L ++H N++KL + L + + E F EI R++
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD---EIIHRMKFNEVDA 138
Query: 169 --IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTH 223
I +V ++YLH I HRD+K N+LL+ + + K+ DFG S + +Q
Sbjct: 139 AVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-VFENQKK 194
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 277
+ ++ GT Y+ PE + + +K DV+S GV+L LL G P G T QE
Sbjct: 195 MKERL-GTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF--GGQTDQE 244
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 70 TNH-FNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQ 127
+NH + ++ ILGQG V++G + G + A+K F + L ++ + E +L +
Sbjct: 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFN---NISFLRPVDVQMREFEVLKK 63
Query: 128 INHRNVVKLLGCCLETE----------VPLLHLHD--HHRNEEFPLTWEIRLRIATEVAG 175
+NH+N+VKL ET P L+ + + L L + +V G
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL----DERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
+++L I HR+IK NI+ D + K+ DFG ++ + D+ V + GT
Sbjct: 124 GMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGT 178
Query: 232 FGYLEPEYHQSSQLTDKS--------DVYSFGVVLVELLTGKKP 267
YL P+ ++ + L D++S GV TG P
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKK------FKLAVDDEE----LLKLEEFINEIVILSQINHRNVVKL-------- 136
GR+M VK F + + D++ L ++E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKK------FKLAVDDEE----LLKLEEFINEIVILSQINHRNVVKL-------- 136
GR+M VK F + + D++ L ++E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+GQG G V+K + G+ +A+KK L +++E + + EI IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITA-LREIKILQLLKHENVVNLI 83
Query: 138 GCCLETEVP-------LLHLHDHHRNE----------EFPLTWEIRLRIATEVAGALSYL 180
C P + + D ++ +F L+ EI+ R+ + L Y+
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYYI 141
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLEP 237
H + I HRD+K+ N+L+ K+ADFG ++ ++ + + T Y P
Sbjct: 142 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 238 EYHQSSQ-LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
E + D++ G ++ E+ T + PI GNT Q ++L + S+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQ-GNTEQHQLALISQLCGSI 249
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 153 HHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG 212
H R EE E R R+ ++ A+ Y H + HRD+K N+LLD AK+ADFG
Sbjct: 105 HGRVEEM----EAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFG 156
Query: 213 TSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQL--TDKSDVYSFGVVLVELLTGKKP 267
S ++ D + T G+ Y PE S +L + D++S GV+L LL G P
Sbjct: 157 LSNMMS-DGEFLRTSC-GSPNYAAPEV-ISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKK------FKLAVDDEE----LLKLEEFINEIVILSQINHRNVVKL-------- 136
GR+M VK F + + D++ L ++E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+GQG G V+K + G+ +A+KK L +++E + + EI IL + H NVV L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITA-LREIKILQLLKHENVVNLI 82
Query: 138 GCCLETEVP-------LLHLHDHHRNE----------EFPLTWEIRLRIATEVAGALSYL 180
C P + + D ++ +F L+ EI+ R+ + L Y+
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYYI 140
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLEP 237
H + I HRD+K+ N+L+ K+ADFG ++ ++ + + T Y P
Sbjct: 141 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 238 EYHQSSQ-LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
E + D++ G ++ E+ T + PI GNT Q ++L + S+
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQ-GNTEQHQLALISQLCGSI 248
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+GQG G V+K + G+ +A+KK L +++E + + EI IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITA-LREIKILQLLKHENVVNLI 83
Query: 138 GCCLETEVP-------LLHLHDHHRNE----------EFPLTWEIRLRIATEVAGALSYL 180
C P + + D ++ +F L+ EI+ R+ + L Y+
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYYI 141
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLEP 237
H + I HRD+K+ N+L+ K+ADFG ++ ++ + + T Y P
Sbjct: 142 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 238 EYHQSSQ-LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
E + D++ G ++ E+ T + PI GNT Q ++L + S+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQ-GNTEQHQLALISQLCGSI 249
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+DE+ +V DFG +K + T +
Sbjct: 134 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKRV----KGRTWXLC 186
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 227
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 167 LRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 226
+R EV AL L+ I HRD+K NILLD+ K+ DFG S +D
Sbjct: 117 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLR 168
Query: 227 KIQGTFGYLEPEYHQSSQLTDKS------DVYSFGVVLVELLTGKKPIF 269
++ GT YL PE + S + D++S GV++ LL G P +
Sbjct: 169 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 147 LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA 206
LL LH + P E R + V G YLH + HRD+K N+ L+E
Sbjct: 104 LLELHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEV 156
Query: 207 KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKK 266
K+ DFG + + D T + GT Y+ PE + + DV+S G ++ LL GK
Sbjct: 157 KIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 267 P 267
P
Sbjct: 216 P 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 147 LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA 206
LL LH + P E R + V G YLH + HRD+K N+ L+E
Sbjct: 104 LLELHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEV 156
Query: 207 KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKK 266
K+ DFG + + D T + GT Y+ PE + + DV+S G ++ LL GK
Sbjct: 157 KIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 267 P 267
P
Sbjct: 216 P 216
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDIK 194
L +E P + H R E R A ++ YLHS + +RD+K
Sbjct: 115 NLYMVMEY-APGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLD---LIYRDLK 168
Query: 195 STNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSF 254
N+++D++ KV DFG +K + T + GT YL PE S D ++
Sbjct: 169 PENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 255 GVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 225 GVLIYEMAAGYPPFFA 240
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 28/147 (19%)
Query: 167 LRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--- 223
L I ++A A+ +LHS + HRD+K +NI KV DFG AMDQ
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQ 221
Query: 224 -VTTKIQ---------GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
V T + GT Y+ PE + + K D++S G++L ELL FST
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS----FSTQM 277
Query: 274 ------TSQENVSLAAFFVHSMRKNHM 294
T N+ F + HM
Sbjct: 278 ERVRIITDVRNLKFPLLFTQKYPQEHM 304
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 227
R ++ A+ Y H I HRD+K N+LLD+ K+ADFG S I D + T
Sbjct: 112 RFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSN-IMTDGNFLKTS 167
Query: 228 IQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 267
G+ Y PE DV+S G+VL +L G+ P
Sbjct: 168 C-GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKLEEF---INEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL+E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E P + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-APGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+++D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLMIDQQGYIQVTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKVVNHKNI 85
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L+ I++ + E L Y LHS
Sbjct: 86 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 145 AG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S GV++ E++ G T + Q N
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+GQG G V+K + G+ +A+KK L +++E + + EI IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITA-LREIKILQLLKHENVVNLI 83
Query: 138 GCCLETEVP-------LLHLHDHHRNE----------EFPLTWEIRLRIATEVAGALSYL 180
C P + + D ++ +F L+ EI+ R+ + L Y+
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYYI 141
Query: 181 HSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLEP 237
H + I HRD+K+ N+L+ K+ADFG ++ ++ + + T Y P
Sbjct: 142 HR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 238 EYHQSSQ-LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
E + D++ G ++ E+ T + PI GNT Q ++L + S+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQ-GNTEQHQLALISQLCGSI 249
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 140 CLETEVPLLHLHDHHRNEEF-PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNI 198
CL E+ +L+D RN F ++ + + A ++ AL +L + S I H D+K NI
Sbjct: 132 CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENI 190
Query: 199 LL--DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGV 256
LL +R K+ DFG+S + + IQ F Y PE D++S G
Sbjct: 191 LLCNPKRXAIKIVDFGSSCQLG---QRIYQXIQSRF-YRSPEVLLGMPYDLAIDMWSLGC 246
Query: 257 VLVELLTGKKPIFSTGN 273
+LVE+ TG +P+FS N
Sbjct: 247 ILVEMHTG-EPLFSGAN 262
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 78 ILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
I +G G V+K L + +AVK F L D++ + E EI + H N+++ +
Sbjct: 22 IKARGRFGCVWKAQLMND-FVAVKIFPL--QDKQSWQSE---REIFSTPGMKHENLLQFI 75
Query: 138 -----GCCLETEVPLL-HLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLHS----- 182
G LE E+ L+ HD ++ +TW +A ++ LSYLH
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 183 ---AASSPIYHRDIKSTNILLDERYRAKVADFGTS-KFIAMDQTHVTTKIQGTFGYLEPE 238
I HRD KS N+LL A +ADFG + +F T GT Y+ PE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 239 YHQSSQLTDKS-----DVYSFGVVLVELLT 263
+ + + D+Y+ G+VL EL++
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E P + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-APGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+++D++ KV DFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+ + + +G G G V G+ +A+KK A D + + + E+ IL
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFK 111
Query: 130 HRNVVKLLGCCLETEVPL-----------LHLHDHHR--NEEFPLTWEIRLRIATEVAGA 176
H N++ + L VP L D H+ + PLT E ++
Sbjct: 112 HDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRG 170
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFG 233
L Y+HSA + HRD+K +N+L++E K+ DFG ++ + + + T+ T
Sbjct: 171 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 234 YLEPEYHQS-SQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
Y PE S + T D++S G + E+L ++ +F N
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGKN 267
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 147 LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA 206
LL LH + P E R + V G YLH + HRD+K N+ L+E
Sbjct: 108 LLELHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEV 160
Query: 207 KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKK 266
K+ DFG + + D T + GT Y+ PE + + DV+S G ++ LL GK
Sbjct: 161 KIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 219
Query: 267 P 267
P
Sbjct: 220 P 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 167 LRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 226
+R EV AL L+ I HRD+K NILLD+ K+ DFG S +D
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLR 181
Query: 227 KIQGTFGYLEPEYHQSSQLTDKS------DVYSFGVVLVELLTGKKPIF 269
++ GT YL PE + S + D++S GV++ LL G P +
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 48 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 107
Query: 137 -LGCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKS 195
L +E VP + H R R A ++ YLHS + +RD+K
Sbjct: 108 NLYMVMEY-VPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD---LIYRDLKP 162
Query: 196 TNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFG 255
N+L+D++ +V DFG +K + T + GT YL PE S D ++ G
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 218
Query: 256 VVLVELLTGKKPIFS 270
V++ E+ G P F+
Sbjct: 219 VLIYEMAAGYPPFFA 233
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLE-DGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN 129
+ + + +G G G V G+ +A+KK A D + + + E+ IL
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFK 112
Query: 130 HRNVVKLLGCCLETEVPL-----------LHLHDHHR--NEEFPLTWEIRLRIATEVAGA 176
H N++ + L VP L D H+ + PLT E ++
Sbjct: 113 HDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRG 171
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFG 233
L Y+HSA + HRD+K +N+L++E K+ DFG ++ + + + T+ T
Sbjct: 172 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 234 YLEPEYHQS-SQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
Y PE S + T D++S G + E+L ++ +F N
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGKN 268
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 140 CLETEVPLLHLHDHHRNEEF-PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNI 198
CL E+ +L+D RN F ++ + + A ++ AL +L + S I H D+K NI
Sbjct: 132 CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENI 190
Query: 199 LL--DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGV 256
LL +R K+ DFG+S + + IQ F Y PE D++S G
Sbjct: 191 LLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSRF-YRSPEVLLGMPYDLAIDMWSLGC 246
Query: 257 VLVELLTGKKPIFSTGN 273
+LVE+ TG +P+FS N
Sbjct: 247 ILVEMHTG-EPLFSGAN 262
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 116
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 117 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 171
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 226
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 116 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 168
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 225 LGVLIYEMAAGYPPFFA 241
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 172
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKVVNHKNI 85
Query: 134 VKLLGCCLETE--------VPLLHLHDHHRNE--EFPLTWEIRLRIATEVAGALSYLHSA 183
+ LL + ++ L D + ++ + L E + ++ + +LHSA
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA 145
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 146 G---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 244 QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S GV++ E++ G T + Q N
Sbjct: 201 GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 76 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 136 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 188
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 245 LGVLIYEMAAGYPPFFA 261
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 116 EEFINEIVILSQINHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRL 167
E+ E+ IL +I H NV+ L +T+V L+ L D +E LT E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 116
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTH 223
++ + YLHS I H D+K NI+L +R R K+ DFG + I D +
Sbjct: 117 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGN 171
Query: 224 VTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
I GT ++ PE L ++D++S GV+ LL+G P G+T QE ++
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLA 226
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 48 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 107
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 108 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 160
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 217 LGVLIYEMAAGYPPFFA 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 116 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 168
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 225 LGVLIYEMAAGYPPFFA 241
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E VP + H R F E R A ++ YLHS + +RD+
Sbjct: 116 NLYMVMEY-VPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 168
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+L+D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 225 LGVLIYEMAAGYPPFFA 241
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDG------RIMAVKKFKL--AVDDEELLKLEEFINEI 122
+ + +++ LG G G V RI++ +KF + A + + L +E EI
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE---TEI 205
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEF-PLTWEIRLRIAT------EVAG 175
IL ++NH ++K+ + E + L E F + RL+ AT ++
Sbjct: 206 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 319
Query: 233 GYLEPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKP 267
YL PE S + D +S GV+L L+G P
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 168 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLC 220
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDG------RIMAVKKFKL--AVDDEELLKLEEFINEI 122
+ + +++ LG G G V RI++ +KF + A + + L +E EI
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE---TEI 191
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEF-PLTWEIRLRIAT------EVAG 175
IL ++NH ++K+ + E + L E F + RL+ AT ++
Sbjct: 192 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 305
Query: 233 GYLEPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKP 267
YL PE S + D +S GV+L L+G P
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 25/206 (12%)
Query: 76 NRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL---EEFINEIVILSQINHRN 132
R LG+GG Y+ D + + K V LLK E+ EI I +++ +
Sbjct: 31 GRFLGKGGFAKCYEITDMDTKEVFAGK---VVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 133 VVKLLGCCLETEV-----------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLH 181
VV G + + LL LH + P E R + + G + YLH
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP---EARYFMRQTIQG-VQYLH 143
Query: 182 SAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQ 241
+ + HRD+K N+ L++ K+ DFG + I D + GT Y+ PE
Sbjct: 144 NNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLC 199
Query: 242 SSQLTDKSDVYSFGVVLVELLTGKKP 267
+ + D++S G +L LL GK P
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 167 LRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 226
+R EV AL L+ I HRD+K NILLD+ K+ DFG S +D
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLR 181
Query: 227 KIQGTFGYLEPEYHQSSQLTDKS------DVYSFGVVLVELLTGKKPIF 269
+ GT YL PE + S + D++S GV++ LL G P +
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 70 TNHFNVNRILGQGGQGTVY------KGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIV 123
++ + R+LG+G G V G ++++ ++ K D E LL+ E+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR------EVQ 78
Query: 124 ILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEFPLTWEIR-------LRIATEVAGA 176
+L Q++H N+ KL + L + E F + RI +V
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFG 233
++Y H + I HRD+K N+LL+ + + ++ DFG S + KI GT
Sbjct: 139 ITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KXKDKI-GTAY 193
Query: 234 YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
Y+ PE + +K DV+S GV+L LL+G P F+ N
Sbjct: 194 YIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP-FNGAN 231
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLX 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 31/207 (14%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
LG G G V+ +AVK K + +E F+ E ++ + H +VKL
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHA 244
Query: 139 CCLETEV----------PLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPI 188
+ + LL + PL + + ++A ++++
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---Y 299
Query: 189 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDK 248
HRD+++ NIL+ K+ADFG ++ A + + PE T K
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGA----------KFPIKWTAPEAINFGSFTIK 349
Query: 249 SDVYSFGVVLVELLT-GKKPIFSTGNT 274
SDV+SFG++L+E++T G+ P N
Sbjct: 350 SDVWSFGILLMEIVTYGRIPYPGMSNP 376
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLA 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 153 HHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFG 212
H R EE E R R+ ++ A+ Y H + HRD+K N+LLD AK+ADFG
Sbjct: 105 HGRVEEM----EAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFG 156
Query: 213 TSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 267
S M G+ Y PE D++S GV+L LL G P
Sbjct: 157 LSNM--MSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 26/200 (13%)
Query: 79 LGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEE-FINEIVILSQINHRNVVKL 136
LG+G TVYK ++ +I+A+KK KL E + + EI +L +++H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 137 LGCC------------LETEVPLLHLHDHHRNEEFPLTWE-IRLRIATEVAGALSYLHSA 183
L +ET++ ++ ++ LT I+ + + G L YLH
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVII-----KDNSLVLTPSHIKAYMLMTLQG-LEYLHQH 131
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K N+LLDE K+ADFG +K ++ T Y PE +
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGA 187
Query: 244 QLTDKS-DVYSFGVVLVELL 262
++ D+++ G +L ELL
Sbjct: 188 RMYGVGVDMWAVGCILAELL 207
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+++D++ KV DFG +K + T +
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLC 200
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+++D++ KV DFG +K + T +
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLC 200
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 29/208 (13%)
Query: 76 NRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL---EEFINEIVILSQINHRN 132
R LG+GG Y+ D + + K V LLK E+ EI I +++ +
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGK---VVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 133 VVKLLG-------------CCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSY 179
VV G C LL LH + P E R + + G + Y
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRS--LLELHKRRKAVTEP---EARYFMRQTIQG-VQY 157
Query: 180 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEY 239
LH+ + HRD+K N+ L++ K+ DFG + I D + GT Y+ PE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEV 213
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGKKP 267
+ + D++S G +L LL GK P
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 29/208 (13%)
Query: 76 NRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL---EEFINEIVILSQINHRN 132
R LG+GG Y+ D + + K V LLK E+ EI I +++ +
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGK---VVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 133 VVKLLG-------------CCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSY 179
VV G C LL LH + P E R + + G + Y
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRS--LLELHKRRKAVTEP---EARYFMRQTIQG-VQY 157
Query: 180 LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEY 239
LH+ + HRD+K N+ L++ K+ DFG + I D + GT Y+ PE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYIAPEV 213
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGKKP 267
+ + D++S G +L LL GK P
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+++D++ KV DFG +K + T +
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLC 200
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 67 DKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
D + V +++G+G G V K D ++ K+ +++ + + EI IL
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHR--QAAEEIRILE 148
Query: 127 QI------NHRNVVKLL-------GCCLETEVPLLHLHDHHRNEEFP-LTWEIRLRIATE 172
+ N NV+ +L C+ E+ ++L++ + +F + + + A
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 173 VAGALSYLHSAASSPIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQG 230
+ L LH + I H D+K NILL ++ R+ KV DFG+S + + V T IQ
Sbjct: 209 ILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTXIQS 262
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTG 264
F Y PE ++ D++S G +L ELLTG
Sbjct: 263 RF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 140 CLETEVPLLHLHDHHRNEEF-PLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNI 198
CL E+ +L+D RN F ++ + + A ++ AL +L + S I H D+K NI
Sbjct: 113 CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENI 171
Query: 199 LL--DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGV 256
LL +R K+ DFG+S + + IQ F Y PE D++S G
Sbjct: 172 LLCNPKRSAIKIVDFGSSCQLGQ---RIYQXIQSRF-YRSPEVLLGMPYDLAIDMWSLGC 227
Query: 257 VLVELLTGKKPIFSTGN 273
+LVE+ TG +P+FS N
Sbjct: 228 ILVEMHTG-EPLFSGAN 243
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+++D++ KV DFG +K + T +
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLC 200
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 115 LEEFINEIVILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEF--------PLTWEIR 166
+E+ EI IL +++H NVVKL+ + L++ N+ PL+ +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 167 LRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 226
++ + YLH I HRDIK +N+L+ E K+ADFG S ++
Sbjct: 140 RFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN 196
Query: 227 KIQGTFGYLEPEYHQSSQ--LTDKS-DVYSFGVVLVELLTGKKP 267
+ GT ++ PE ++ + K+ DV++ GV L + G+ P
Sbjct: 197 TV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 38/211 (18%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V++G + G +AVK F + D++ + E N +++ H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS-SRDEKSWFRETELYNTVML----RHENILGFIA 69
Query: 139 CCL-----ETEVPLL-HLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLH-----SA 183
+ T++ L+ H H+ ++ L LRI +A L++LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-------GTFGYLE 236
I HRD+KS NIL+ + + +AD G +A+ + T ++ GT Y+
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 237 PEYHQSSQLTD------KSDVYSFGVVLVEL 261
PE + D + D+++FG+VL E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 38/211 (18%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V++G + G +AVK F + D++ + E N +++ H N++ +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFS-SRDEKSWFRETELYNTVML----RHENILGFIA 98
Query: 139 CCL-----ETEVPLL-HLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLH-----SA 183
+ T++ L+ H H+ ++ L LRI +A L++LH +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-------GTFGYLE 236
I HRD+KS NIL+ + + +AD G +A+ + T ++ GT Y+
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 237 PEYHQSSQLTD------KSDVYSFGVVLVEL 261
PE + D + D+++FG+VL E+
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 67 DKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
D + V +++G+G G V K D ++ K+ +++ + + EI IL
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHR--QAAEEIRILE 148
Query: 127 QI------NHRNVVKLLG-------CCLETEVPLLHLHDHHRNEEFP-LTWEIRLRIATE 172
+ N NV+ +L C+ E+ ++L++ + +F + + + A
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 173 VAGALSYLHSAASSPIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQG 230
+ L LH + I H D+K NILL ++ R+ KV DFG+S + + V T IQ
Sbjct: 209 ILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTXIQS 262
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTG 264
F Y PE ++ D++S G +L ELLTG
Sbjct: 263 RF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 38/211 (18%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V++G + G +AVK F + D++ + E N +++ H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS-SRDEKSWFRETELYNTVML----RHENILGFIA 69
Query: 139 CCL-----ETEVPLL-HLHDHHRNEEF----PLTWEIRLRIATEVAGALSYLH-----SA 183
+ T++ L+ H H+ ++ L LRI +A L++LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-------GTFGYLE 236
I HRD+KS NIL+ + + +AD G +A+ + T ++ GT Y+
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 237 PEYHQSSQLTD------KSDVYSFGVVLVEL 261
PE + D + D+++FG+VL E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTS--QENVSLAAFFVH 287
GT YL PE S D ++ GV++ E+ G P F+ ++ VS F
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-- 257
Query: 288 SMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKK 328
+H L D + L++ + AF NL D+ K
Sbjct: 258 ---PSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHK 295
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 188 IYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
+ HRD+K N+LL + + K+ADFG + + DQ GT GYL PE +
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKEA 182
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIF 269
D+++ GV+L LL G P +
Sbjct: 183 YGKPVDIWACGVILYILLVGYPPFW 207
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 142 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 194
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 235
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 17/113 (15%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAM--DQTH 223
+ +VA AL +LH+ I HRD+K NIL + + K+ DFG I + D +
Sbjct: 116 VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 224 VTTK----IQGTFGYLEPE----YHQSSQLTDK-SDVYSFGVVLVELLTGKKP 267
++T G+ Y+ PE + + + + DK D++S GV+L LL+G P
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 188 IYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
I HRD+K N+LL + + K+ADFG + + DQ GT GYL PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDP 182
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIF 269
D+++ GV+L LL G P +
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFW 207
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 22/215 (10%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKVVNHKNI 85
Query: 134 VKLLGCCLETE--------VPLLHLHDHHRNE--EFPLTWEIRLRIATEVAGALSYLHSA 183
+ LL + ++ L D + ++ + L E + ++ + +LHSA
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 146 G---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 244 QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S G ++ E++ G T + Q N
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 22/215 (10%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETE--------VPLLHLHDHHRNE--EFPLTWEIRLRIATEVAGALSYLHSA 183
+ LL + ++ L D + ++ + L E + ++ + +LHSA
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 244 QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S G ++ E++ G T + Q N
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 200
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 168 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 220
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 25/201 (12%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +A+KK E K E+++L + H NV+ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK--RAYRELLLLKHMQHENVIGLL 89
Query: 138 GCCLETE-----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
+P + D + + E + ++ L Y+HSA
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG-- 146
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQGTFGYLEPEYHQSSQL 245
+ HRD+K N+ ++E K+ DFG ++ + T +V T+ Y PE S
Sbjct: 147 -VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMH 200
Query: 246 TDKS-DVYSFGVVLVELLTGK 265
+++ D++S G ++ E+LTGK
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGK 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 22/215 (10%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETE--------VPLLHLHDHHRNE--EFPLTWEIRLRIATEVAGALSYLHSA 183
+ LL + ++ L D + ++ + L E + ++ + +LHSA
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 146 G---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 244 QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S G ++ E++ G T + Q N
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 95 GRIMAVKKFKLA-------VDDEELLKL---EEFINEIVILSQINHRNVVKL-------- 136
GR+M VK + +D ++++KL E +NE IL +N +VKL
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 137 -LGCCLETEVPLLHLHDHHRN-EEFPLTWEIRLRI-ATEVAGALSYLHSAASSPIYHRDI 193
L +E P + H R F E R A ++ YLHS + +RD+
Sbjct: 115 NLYMVMEY-APGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYLHSLD---LIYRDL 167
Query: 194 KSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYS 253
K N+++D++ +V DFG +K + T + GT YL PE S D ++
Sbjct: 168 KPENLMIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 254 FGVVLVELLTGKKPIFS 270
GV++ E+ G P F+
Sbjct: 224 LGVLIYEMAAGYPPFFA 240
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 77 RILGQGGQGTVYKGMLED-GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVK 135
+ LG GG G V+ + D + +A+KK L D + +K + EI I+ +++H N+VK
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVK--HALREIKIIRRLDHDNIVK 72
Query: 136 LL------GCCLETEV-PLLHLHDHHRNEEF------------PLTWEIRLRIATEVAGA 176
+ G L +V L L+ + +E+ PL E ++
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRG 132
Query: 177 LSYLHSAASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFG 233
L Y+HSA + HRD+K N+ ++ E K+ DFG ++ + +H +G T
Sbjct: 133 LKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW 189
Query: 234 YLEPEYHQS-SQLTDKSDVYSFGVVLVELLTGK 265
Y P S + T D+++ G + E+LTGK
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 188 IYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
I HRD+K N+LL + + K+ADFG + + DQ GT GYL PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDP 182
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIF 269
D+++ GV+L LL G P +
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFW 207
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 25/201 (12%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +A+KK E K E+++L + H NV+ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK--RAYRELLLLKHMQHENVIGLL 107
Query: 138 GCCLETE-----------VPLLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASS 186
+P + D + + E + ++ L Y+HSA
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG-- 164
Query: 187 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQGTFGYLEPEYHQSSQL 245
+ HRD+K N+ ++E K+ DFG ++ + T +V T+ Y PE S
Sbjct: 165 -VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMH 218
Query: 246 TDKS-DVYSFGVVLVELLTGK 265
+++ D++S G ++ E+LTGK
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGK 239
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 147 LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA 206
LL LH + P E R + V G YLH + HRD+K N+ L+E
Sbjct: 102 LLELHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEV 154
Query: 207 KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKK 266
K+ DFG + + D + GT Y+ PE + + DV+S G ++ LL GK
Sbjct: 155 KIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 213
Query: 267 P 267
P
Sbjct: 214 P 214
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 86 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S G ++ E++ G T + Q N
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 227
R ++ A+ Y H I HRD+K N+LLDE K+ADFG S I D + T
Sbjct: 107 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTS 162
Query: 228 IQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 267
G+ Y PE DV+S GV+L +L + P
Sbjct: 163 C-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDG------RIMAVKKFKL--AVDDEELLKLEEFINEI 122
+ + +++ LG G G V +I++ +KF + A + + L +E EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE---TEI 66
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEF-PLTWEIRLRIAT------EVAG 175
IL ++NH ++K+ + E + L E F + RL+ AT ++
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 233 GYLEPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKP 267
YL PE S + D +S GV+L L+G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 147 LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA 206
LL LH + P E R + V G YLH + HRD+K N+ L+E
Sbjct: 126 LLELHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEV 178
Query: 207 KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKK 266
K+ DFG + + D + GT Y+ PE + + DV+S G ++ LL GK
Sbjct: 179 KIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 237
Query: 267 P 267
P
Sbjct: 238 P 238
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKVVNHKNI 85
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L+ I++ + E L Y LHS
Sbjct: 86 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 145 AG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S G ++ E++ G T + Q N
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 41/223 (18%)
Query: 70 TNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELL--------KLEEFINE 121
+ ++ LG G G V+ + ++ V KF + E++L KL + E
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKF---IKKEKVLEDCWIEDPKLGKVTLE 79
Query: 122 IVILSQINHRNVVKLL----------------GCCLETEVPLLHLHDHHRNEEFPLTWEI 165
I ILS++ H N++K+L G L+ L D H + PL
Sbjct: 80 IAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLD----LFAFIDRHPRLDEPLA--- 132
Query: 166 RLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT 225
I ++ A+ YL I HRDIK NI++ E + K+ DFG++ ++ + T
Sbjct: 133 -SYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 267
GT Y PE + +++S GV L L+ + P
Sbjct: 189 --FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 227
R ++ A+ Y H I HRD+K N+LLDE K+ADFG S I D + T
Sbjct: 117 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTS 172
Query: 228 IQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 267
G+ Y PE DV+S GV+L +L + P
Sbjct: 173 C-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 147 LLHLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA 206
LL LH + P E R + V G YLH + HRD+K N+ L+E
Sbjct: 128 LLELHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR---VIHRDLKLGNLFLNEDLEV 180
Query: 207 KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKK 266
K+ DFG + + D + GT Y+ PE + + DV+S G ++ LL GK
Sbjct: 181 KIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
Query: 267 P 267
P
Sbjct: 240 P 240
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 41/218 (18%)
Query: 78 ILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINE--IVILSQINHRNVVK 135
++G+G G VYKG L D R +AVK F A + FINE I + + H N+ +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFA-------NRQNFINEKNIYRVPLMEHDNIAR 71
Query: 136 LL----GCCLETEVPLLHLHDHHRNEEF-------PLTWEIRLRIATEVAGALSYLHSAA 184
+ + + L + +++ N W R+A V L+YLH+
Sbjct: 72 FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 185 S------SPIYHRDIKSTNILLDERYRAKVADFGTSKFI-------AMDQTHVTTKIQGT 231
I HRD+ S N+L+ ++DFG S + ++ + GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 232 FGYLEPEYHQSS-QLTD------KSDVYSFGVVLVELL 262
Y+ PE + + L D + D+Y+ G++ E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 31 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 86
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 87 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 145
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 146 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S G ++ E++ G T + Q N
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 236
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDG------RIMAVKKFKL--AVDDEELLKLEEFINEI 122
+ + +++ LG G G V +I++ +KF + A + + L +E EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE---TEI 66
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEF-PLTWEIRLRIAT------EVAG 175
IL ++NH ++K+ + E + L E F + RL+ AT ++
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 233 GYLEPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKP 267
YL PE S + D +S GV+L L+G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 227
R ++ A+ Y H I HRD+K N+LLDE K+ADFG S I D + T
Sbjct: 111 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTS 166
Query: 228 IQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 267
G+ Y PE DV+S GV+L +L + P
Sbjct: 167 C-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDG------RIMAVKKFKL--AVDDEELLKLEEFINEI 122
+ + +++ LG G G V +I++ +KF + A + + L +E EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE---TEI 66
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEF-PLTWEIRLRIAT------EVAG 175
IL ++NH ++K+ + E + L E F + RL+ AT ++
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 233 GYLEPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKP 267
YL PE S + D +S GV+L L+G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 86 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S G ++ E++ G T + Q N
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDG------RIMAVKKFKL--AVDDEELLKLEEFINEI 122
+ + +++ LG G G V +I++ +KF + A + + L +E EI
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE---TEI 65
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEF-PLTWEIRLRIAT------EVAG 175
IL ++NH ++K+ + E + L E F + RL+ AT ++
Sbjct: 66 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 179
Query: 233 GYLEPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKP 267
YL PE S + D +S GV+L L+G P
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 227
R ++ A+ Y H I HRD+K N+LLDE K+ADFG S I D + T
Sbjct: 116 RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTS 171
Query: 228 IQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 267
G+ Y PE DV+S GV+L +L + P
Sbjct: 172 C-GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 82/205 (40%), Gaps = 43/205 (20%)
Query: 79 LGQGGQGTVYK-GMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG G G V+K EDGR+ AVK+ + + L+++ V
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKR--------SMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 138 GCC--------------LETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG-------A 176
CC L+TE+ L H W L A +V G A
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCE------AWGASLPEA-QVWGYLRDTLLA 169
Query: 177 LSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
L++LHS + H D+K NI L R R K+ DFG + + +G Y+
Sbjct: 170 LAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 237 PEYHQSSQLTDKSDVYSFGVVLVEL 261
PE Q S T +DV+S G+ ++E+
Sbjct: 225 PELLQGSYGT-AADVFSLGLTILEV 248
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ F + R Q G G Y +KK +L+ + + EE E+ IL +I
Sbjct: 14 GSGQFAIVRKCRQKGTGKEYAAKF-------IKKRRLSSSRRGVSR-EEIEREVNILREI 65
Query: 129 NHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYL 180
H N++ L +T+V L+ L D +E LT + + ++ + YL
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYL 124
Query: 181 HSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
HS I H D+K NI+L ++ R K+ DFG + I + + I GT ++
Sbjct: 125 HSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVA 179
Query: 237 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
PE L ++D++S GV+ LL+G P G T QE ++
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GETKQETLT 221
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 30/218 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGMLEDG------RIMAVKKFKL--AVDDEELLKLEEFINEI 122
+ + +++ LG G G V +I++ +KF + A + + L +E EI
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE---TEI 72
Query: 123 VILSQINHRNVVKLLGCCLETEVPLLHLHDHHRNEEF-PLTWEIRLRIAT------EVAG 175
IL ++NH ++K+ + E + L E F + RL+ AT ++
Sbjct: 73 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 176 ALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 232
A+ YLH I HRD+K N+LL +E K+ DFG SK + +T + + GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 186
Query: 233 GYLEPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKP 267
YL PE S + D +S GV+L L+G P
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 86 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILG 199
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S G ++ E++ G T + Q N
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ F + R Q G G Y +KK +L+ + + EE E+ IL +I
Sbjct: 21 GSGQFAIVRKCRQKGTGKEYAAKF-------IKKRRLSSSRRGVSR-EEIEREVNILREI 72
Query: 129 NHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYL 180
H N++ L +T+V L+ L D +E LT + + ++ + YL
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYL 131
Query: 181 HSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
HS I H D+K NI+L ++ R K+ DFG + I + + I GT ++
Sbjct: 132 HSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVA 186
Query: 237 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
PE L ++D++S GV+ LL+G P G T QE ++
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GETKQETLT 228
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 50/226 (22%)
Query: 79 LGQGGQGTVYKGM--LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKL 136
LG+G TVYKG L D ++A+K+ +L + EE I E+ +L + H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRL--EHEEGAPCTA-IREVSLLKDLKHANIVTL 65
Query: 137 LGCCLETEVPLLHLHDH-HRNEEFPLTWE---------------------IRLRIATEVA 174
HD H + L +E ++L + +
Sbjct: 66 --------------HDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLR 111
Query: 175 GALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 234
G L+Y H + HRD+K N+L++ER K+ADFG ++ ++ ++ T Y
Sbjct: 112 G-LAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWY 166
Query: 235 LEPE-YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 279
P+ S+ + + D++ G + E+ TG +P+F G+T +E +
Sbjct: 167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATG-RPLFP-GSTVEEQL 210
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 188 IYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
I HRD+K N+LL + + K+ADFG + + +Q GT GYL PE +
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ-QAWFGFAGTPGYLSPEVLRKDP 209
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIF 269
D+++ GV+L LL G P +
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFW 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+++D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL PE S D ++ GV++ ++ G P F+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFA 240
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+L+D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILG 274
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 119/287 (41%), Gaps = 46/287 (16%)
Query: 76 NRILGQGGQGTVYKGMLED----GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHR 131
N LGQG ++KG+ + G++ + +D E F ++S+++H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 132 NVVKLLGCCLETEVPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSA 183
++V G C+ + +L L + + + + +L +A ++A A+ +L
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI------QGTFGYLEP 237
+ H ++ + NILL R + G FI + ++ + Q ++ P
Sbjct: 133 T---LIHGNVCAKNILL---IREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 238 EYHQSSQ-LTDKSDVYSFGVVLVELLTG-KKPIFSTGNTSQENVSLAAFFVHSMRKNHMY 295
E ++ + L +D +SFG L E+ +G KP+ + + S RK Y
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA---------------LDSQRKLQFY 231
Query: 296 DILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ D + K ++ ANL C+D RP+ + +LN +
Sbjct: 232 E--DRHQLPAPKAAEL---ANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 227
R+ ++ + Y H + HRD+K N+LLD AK+ADFG S M
Sbjct: 120 RLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRX 174
Query: 228 IQGTFGYLEPEYHQSSQL--TDKSDVYSFGVVLVELLTGKKP 267
G+ Y PE S +L + D++S GV+L LL G P
Sbjct: 175 SCGSPNYAAPEV-ISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + ++ + E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 144
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ A + T GY+
Sbjct: 145 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT----------GYV 190
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 32 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 87
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 88 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 146
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ V + T Y PE
Sbjct: 147 AG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYYRAPEVILG 201
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S G ++ E++ G T + Q N
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 237
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + ++ + E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 144
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ A + T GY+
Sbjct: 145 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT----------GYV 190
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS------- 242
HRDIK NILLD ++ADFG+ + D T + GT YL PE Q+
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFS 270
+ D ++ GV E+ G+ P ++
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTPFYA 272
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 144
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ A + T GY+
Sbjct: 145 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT----------GYV 190
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQI 128
+ F + R Q G G Y +KK +L + + EE E+ IL +I
Sbjct: 35 GSGQFAIVRKCRQKGTGKEYAAKF-------IKKRRLXSSRRGVSR-EEIEREVNILREI 86
Query: 129 NHRNVVKLLGCCL-ETEVPLL-------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYL 180
H N++ L +T+V L+ L D +E LT + + ++ + YL
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYL 145
Query: 181 HSAASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLE 236
HS I H D+K NI+L ++ R K+ DFG + I + + I GT ++
Sbjct: 146 HSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVA 200
Query: 237 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 280
PE L ++D++S GV+ LL+G P G T QE ++
Sbjct: 201 PEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GETKQETLT 242
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKL 305
+YD +D ++L
Sbjct: 250 GTEDLYDYIDKYNIEL 265
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 137 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 192
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 193 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 247
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 248 GTEDLYDYIDKYNIELDPRFNDILG 272
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 23/220 (10%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL-------EE 117
EL + + V R + G G V G+ +G +A+K+ V D + + +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLLH----LHDHHRNEEFPLTWEIRLRIATEV 173
+ EI +L+ +H N++ L + E P +H + + R + + + R+ I+ +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 174 AGALSY-----LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD--QTHVTT 226
Y LH + + HRD+ NILL + + DF ++ D +TH T
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 227 KIQGTFGYLEPE-YHQSSQLTDKSDVYSFGVVLVELLTGK 265
Y PE Q T D++S G V+ E+ K
Sbjct: 196 HRW----YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 23/220 (10%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKL-------EE 117
EL + + V R + G G V G+ +G +A+K+ V D + + +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 118 FINEIVILSQINHRNVVKLLGCCLETEVPLLH----LHDHHRNEEFPLTWEIRLRIATEV 173
+ EI +L+ +H N++ L + E P +H + + R + + + R+ I+ +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 174 AGALSY-----LHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD--QTHVTT 226
Y LH + + HRD+ NILL + + DF ++ D +TH T
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 227 KIQGTFGYLEPE-YHQSSQLTDKSDVYSFGVVLVELLTGK 265
Y PE Q T D++S G V+ E+ K
Sbjct: 196 HRW----YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 118/287 (41%), Gaps = 46/287 (16%)
Query: 76 NRILGQGGQGTVYKGMLED----GRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHR 131
N LGQG ++KG+ + G++ + +D E F ++S+++H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 132 NVVKLLGCCLETEVPLL--------HLHDHHRNEEFPLTWEIRLRIATEVAGALSYLHSA 183
++V G C + +L L + + + + +L +A ++A A+ +L
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEEN 132
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI------QGTFGYLEP 237
+ H ++ + NILL R + G FI + ++ + Q ++ P
Sbjct: 133 T---LIHGNVCAKNILL---IREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 238 EYHQSSQ-LTDKSDVYSFGVVLVELLTG-KKPIFSTGNTSQENVSLAAFFVHSMRKNHMY 295
E ++ + L +D +SFG L E+ +G KP+ + + S RK Y
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA---------------LDSQRKLQFY 231
Query: 296 DILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMELNGI 342
+ D + K ++ ANL C+D RP+ + +LN +
Sbjct: 232 E--DRHQLPAPKAAEL---ANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILG 274
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 144 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 199
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 200 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 254
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 255 GTEDLYDYIDKYNIELDPRFNDILG 279
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILG 274
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILG 274
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILG 274
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 138 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 193
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 194 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 248
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 249 GTEDLYDYIDKYNIELDPRFNDILG 273
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILG 274
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 168 RIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADF--GTSKFIAMDQT 222
R+ +VA AL +LH+ I HRD+K NIL + + K+ DF G+ + T
Sbjct: 115 RVVRDVAAALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCT 171
Query: 223 HVTTK----IQGTFGYLEPEY-----HQSSQLTDKSDVYSFGVVLVELLTGKKP 267
+TT G+ Y+ PE Q++ + D++S GVVL +L+G P
Sbjct: 172 PITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 190 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS 249
HRD+K NIL+ A + DFG + ++ GT Y PE S T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 250 DVYSFGVVLVELLTGKKP 267
D+Y+ VL E LTG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 138 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 193
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 194 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 248
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 249 GTEDLYDYIDKYNIELDPRFNDILG 273
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILG 274
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
Query: 167 LRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTH 223
+R+ ++ + YLH + I H D+K NILL Y K+ DFG S+ I H
Sbjct: 134 IRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG----H 186
Query: 224 VTT--KIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
+I GT YL PE +T +D+++ G++ LLT P N
Sbjct: 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 67 DKATNHFNVNRILGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILS 126
D + V +++G+G G V K D ++ K+ +++ + + EI IL
Sbjct: 93 DHVAYRYEVLKVIGKGXFGQVVKAY--DHKVHQHVALKMVRNEKRFHR--QAAEEIRILE 148
Query: 127 QI------NHRNVVKLLG-------CCLETEVPLLHLHDHHRNEEFP-LTWEIRLRIATE 172
+ N NV+ +L C+ E+ ++L++ + +F + + + A
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 173 VAGALSYLHSAASSPIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQG 230
+ L LH + I H D+K NILL ++ R+ KV DFG+S + + V IQ
Sbjct: 209 ILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYXXIQS 262
Query: 231 TFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTG 264
F Y PE ++ D++S G +L ELLTG
Sbjct: 263 RF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILG 274
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILG 274
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 188 IYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
+ HRD+K N+LL + + K+ADFG + + +Q GT GYL PE +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDP 200
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIF 269
D+++ GV+L LL G P +
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFW 225
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQG 230
E+ AL Y HS I HRD+K N+++D +R ++ D+G ++F Q + ++
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVAS 194
Query: 231 TFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSM 289
+ + PE Q+ D S D++S G +L ++ K+P F + + V +A +
Sbjct: 195 RY-FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV----L 249
Query: 290 RKNHMYDILDDQVVKLVKK-NQIMA 313
+YD +D ++L + N I+
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILG 274
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT YL P S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 86 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA---MDQTHVTTKIQGTFGYLEPEY 239
A I HRD+K +NI++ K+ DFG ++ M + V T+ Y PE
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-----YRAPEV 196
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKXVNHKNI 85
Query: 134 VKLLGCCLETEVP--------LLHLHDHHRNE--EFPLTWEIRLRIATEVAGALSYLHSA 183
+ LL + ++ L D + + + L E + ++ + +LHSA
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 146 G---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 244 QLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHK 222
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLD--ERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
++ +SY HS I HRD+K N LLD R K+ DFG SK + +T
Sbjct: 124 QLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-- 178
Query: 230 GTFGYLEPEYHQSSQLTDK-SDVYSFGVVLVELLTGKKP 267
GT Y+ PE + K +DV+S GV L +L G P
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V+ G G +AVK F ++ + E +++ H N++ +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVF-FTTEEASWFRETEIYQTVLM----RHENILGFIA 98
Query: 139 CCLETEVPLLHLH---DHHRN-------EEFPLTWEIRLRIATEVAGALSYLH----SAA 184
++ L+ D+H N + L + L++A L +LH S
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 185 SSP-IYHRDIKSTNILLDERYRAKVADFGTS-KFIAMDQTHV----TTKIQGTFGYLEPE 238
P I HRD+KS NIL+ + +AD G + KFI+ D V T++ GT Y+ PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS-DTNEVDIPPNTRV-GTKRYMPPE 216
Query: 239 YHQSS------QLTDKSDVYSFGVVLVEL 261
S Q +D+YSFG++L E+
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 122/306 (39%), Gaps = 63/306 (20%)
Query: 75 VNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQIN-HRN 132
V R+L +GG VY+ + GR A+K+ L ++EE K I E+ + +++ H N
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKR--LLSNEEE--KNRAIIQEVCFMKKLSGHPN 87
Query: 133 VVKLLGCC---------------LETEVPLLHLHDHHRNEEF--PLTWEIRLRIATEVAG 175
+V+ L TE+ L + + E PL+ + L+I +
Sbjct: 88 IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-------------AMDQT 222
A+ ++H PI HRD+K N+LL + K+ DFG++ I A+ +
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 223 HVTTKIQGTFGYLEPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 279
+T T Y PE + + + +K D+++ G +L
Sbjct: 207 EITRNT--TPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-------------------- 244
Query: 280 SLAAFFVHSMRKNHMYDILDDQVVKLVKKNQIMAFANLAERCLDLNGKKRPTMEEVTMEL 339
L F H I++ + Q F +L L +N ++R ++ EV +L
Sbjct: 245 -LLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303
Query: 340 NGIRGS 345
I +
Sbjct: 304 QEIAAA 309
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKXVNHKNI 85
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 86 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 145 AG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVT 225
I ++ A+S++H + HRD+K N+L ++ K+ DFG ++ D +
Sbjct: 111 IMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T T Y PE + + D++S GV+L +L+G+ P S
Sbjct: 168 TPC-FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + ++ + E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDH----------VQFLIYQILRG 133
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 134 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 179
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKXVNHKNI 85
Query: 134 VKLLGCCLETEVP--------LLHLHDHHRNE--EFPLTWEIRLRIATEVAGALSYLHSA 183
+ LL + ++ L D + + + L E + ++ + +LHSA
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 145
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 146 G---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 244 QLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHK 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 88/221 (39%), Gaps = 60/221 (27%)
Query: 77 RILGQGGQGTVYKGMLEDGRI---MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
R +G G G+V D R+ +AVKK L+ + L+ E+ +L + H NV
Sbjct: 26 RPVGSGAYGSVCSAY--DARLRQKVAVKK--LSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 134 VKLL----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
+ LL G L V L D H ++ +
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH----------VQFLVYQ 131
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
+ G L Y+HSA I HRD+K +N+ ++E ++ DFG +A T T
Sbjct: 132 LLRG-LKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG----LARQADEEMTGYVAT 183
Query: 232 FGYLEPE-------YHQSSQLTDKSDVYSFGVVLVELLTGK 265
Y PE Y+Q+ D++S G ++ ELL GK
Sbjct: 184 RWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGK 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAM--DQTH 223
+ +VA AL +LH+ I HRD+K NIL + + K+ DF I + D +
Sbjct: 116 VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172
Query: 224 VTTK----IQGTFGYLEPE----YHQSSQLTDK-SDVYSFGVVLVELLTGKKP 267
++T G+ Y+ PE + + + + DK D++S GV+L LL+G P
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + ++ + E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 133
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 134 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATR 182
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 24 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 79
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 80 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 139 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 194 MGYKENVDLWSVGCIMGEMVCHK 216
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 55/223 (24%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKF-KLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
LG+G G V++ + + + KF K+ D+ L+K EI IL+ HRN+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVK-----KEISILNIARHRNI---- 63
Query: 138 GCCLETEVPLLHLHDHHRN-EEFPLTWE------IRLRIAT---------------EVAG 175
LHLH+ + EE + +E I RI T +V
Sbjct: 64 ----------LHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCE 113
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFG 233
AL +LHS I H DI+ NI+ R + K+ +FG ++ Q + F
Sbjct: 114 ALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR-----QLKPGDNFRLLFT 165
Query: 234 ---YLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 273
Y PE HQ ++ +D++S G ++ LL+G P + N
Sbjct: 166 APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN 208
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE ++ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 187 WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 35 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 90
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 91 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 149
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 150 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 204
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 205 MGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATR 186
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATR 186
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + ++ + E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 133
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 134 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 179
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 97
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 98 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 147
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 148 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 193
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 241
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +LE R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 86 IGLLNV-FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA---MDQTHVTTKIQGTFGYLEPEY 239
A I HRD+K +NI++ K+ DFG ++ M + V T+ Y PE
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-----YRAPEV 196
Query: 240 HQSSQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 197 ILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 88/221 (39%), Gaps = 60/221 (27%)
Query: 77 RILGQGGQGTVYKGMLEDGRI---MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
R +G G G+V D R+ +AVKK L+ + L+ E+ +L + H NV
Sbjct: 34 RPVGSGAYGSVCSAY--DARLRQKVAVKK--LSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 134 VKLL----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
+ LL G L V L D H ++ +
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH----------VQFLVYQ 139
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
+ G L Y+HSA I HRD+K +N+ ++E ++ DFG +A T T
Sbjct: 140 LLRG-LKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFG----LARQADEEMTGYVAT 191
Query: 232 FGYLEPE-------YHQSSQLTDKSDVYSFGVVLVELLTGK 265
Y PE Y+Q+ D++S G ++ ELL GK
Sbjct: 192 RWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGK 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 183
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 157
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 158 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATR 206
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 31/191 (16%)
Query: 121 EIVILSQINHRNVVKLLGCCLE------------TEVPLLHLHDHHR-----NEEFPLTW 163
EI +L ++ H NV+ L L E L H+ HR + L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 164 EIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILL----DERYRAKVADFGTSKFI-- 217
+ + ++ + YLH+ + HRD+K NIL+ ER R K+AD G ++
Sbjct: 128 GMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 218 AMDQTHVTTKIQGTFGYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
+ + TF Y PE ++ K+ D+++ G + ELLT +PIF + Q
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIF---HCRQ 240
Query: 277 ENVSLAAFFVH 287
E++ + + H
Sbjct: 241 EDIKTSNPYHH 251
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL-DERYRA--KVADFGTSKFIAMDQTHVT 225
I + A+ YLHS I HRD+K N+L +R A K+ DFG +K +T
Sbjct: 120 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSLT 175
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T + Y+ PE + D++S GV++ LL G P +S
Sbjct: 176 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL-DERYRA--KVADFGTSKFIAMDQTHVT 225
I + A+ YLHS I HRD+K N+L +R A K+ DFG +K +T
Sbjct: 121 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSLT 176
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T + Y+ PE + D++S GV++ LL G P +S
Sbjct: 177 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 220
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL-DERYRA--KVADFGTSKFIAMDQTHVT 225
I + A+ YLHS I HRD+K N+L +R A K+ DFG +K +T
Sbjct: 127 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSLT 182
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T + Y+ PE + D++S GV++ LL G P +S
Sbjct: 183 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 226
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 23 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 78
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 79 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 137
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 138 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 170 ATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
A ++ YLHS + +RD+K N+L+D++ +V DFG +K + T +
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLC 199
Query: 230 GTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
GT L PE S D ++ GV++ E+ G P F+
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
L + G ++KG + G + VK K V D K +F E L +H NV+ +LG
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLK--VRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 139 CCLETEVPLLHLHDH-----------HRNEEFPLTWEIRLRIATEVAGALSYLHSAASSP 187
C P L H H F + ++ A ++A +++LH+ P
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL--EP 132
Query: 188 IYHR-DIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF---GYLEPEYHQ-S 242
+ R + S ++++DE A+ I+M + + G ++ PE Q
Sbjct: 133 LIPRHALNSRSVMIDEDMTAR---------ISMADVKFSFQSPGRMYAPAWVAPEALQKK 183
Query: 243 SQLTDK--SDVYSFGVVLVELLTGKKPIFSTGN 273
+ T++ +D++SF V+L EL+T + P N
Sbjct: 184 PEDTNRRSADMWSFAVLLWELVTREVPFADLSN 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 156
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 157 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 202
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 250
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 142
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 143 -LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYV 188
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 157
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 158 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 203
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL-DERYRA--KVADFGTSKFIAMDQTHVT 225
I + A+ YLHS I HRD+K N+L +R A K+ DFG +K +T
Sbjct: 126 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSLT 181
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T + Y+ PE + D++S GV++ LL G P +S
Sbjct: 182 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 225
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL-DERYRA--KVADFGTSKFIAMDQTHVT 225
I + A+ YLHS I HRD+K N+L +R A K+ DFG +K +T
Sbjct: 172 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSLT 227
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T + Y+ PE + D++S GV++ LL G P +S
Sbjct: 228 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 271
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL-DERYRA--KVADFGTSKFIAMDQTHVT 225
I + A+ YLHS I HRD+K N+L +R A K+ DFG +K +T
Sbjct: 128 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSLT 183
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T + Y+ PE + D++S GV++ LL G P +S
Sbjct: 184 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETEVP--------LLHLHDHHRNE--EFPLTWEIRLRIATEVAGALSYLHSA 183
+ LL + ++ L D + + + L E + ++ + +LHSA
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 145
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 146 G---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 244 QLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 143
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 144 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 189
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 237
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL-DERYRA--KVADFGTSKFIAMDQTHVT 225
I + A+ YLHS I HRD+K N+L +R A K+ DFG +K +T
Sbjct: 166 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSLT 221
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T + Y+ PE + D++S GV++ LL G P +S
Sbjct: 222 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 23 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 78
Query: 134 VKLLGCCLETEVP--------LLHLHDHHRNE--EFPLTWEIRLRIATEVAGALSYLHSA 183
+ LL + ++ L D + + + L E + ++ + +LHSA
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 138
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSS 243
I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 139 G---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 244 QLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHK 215
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL-DERYRA--KVADFGTSKFIAMDQTHVT 225
I + A+ YLHS I HRD+K N+L +R A K+ DFG +K +T
Sbjct: 122 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSLT 177
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T + Y+ PE + D++S GV++ LL G P +S
Sbjct: 178 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 24 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 79
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 80 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 139 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 68 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 123
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 124 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 182
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 183 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 31 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 86
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 87 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 145
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 146 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 31 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 86
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 87 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 145
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 146 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 29 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 84
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 85 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 143
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 144 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 198
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 199 MGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL-DERYRA--KVADFGTSKFIAMDQTHVT 225
I + A+ YLHS I HRD+K N+L +R A K+ DFG +K +T
Sbjct: 136 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSLT 191
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T + Y+ PE + D++S GV++ LL G P +S
Sbjct: 192 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 235
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 24 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 79
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 80 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 138
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 139 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 86 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL-DERYRA--KVADFGTSKFIAMDQTHVT 225
I + A+ YLHS I HRD+K N+L +R A K+ DFG +K +T
Sbjct: 122 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-SHNSLT 177
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 270
T + Y+ PE + D++S GV++ LL G P +S
Sbjct: 178 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 221
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 148
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 149 -LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYV 194
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 242
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 86 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 144
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGXVATR 186
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V Y +L+ R +A+KK ++ K E+V++ +NH+N+
Sbjct: 68 KPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 123
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I++ + E L Y LHS
Sbjct: 124 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 182
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 183 AG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 237
Query: 243 SQLTDKSDVYSFGVVLVELLTGK 265
+ D++S G ++ E++ K
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 183
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 142
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 143 -LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATR 191
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + ++ + E+ +L + H NV+ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 135
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 136 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 181
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 134
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 135 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 180
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 228
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + ++ + E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 133
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 134 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 179
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + ++ + E+ +L + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 134
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 135 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 180
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 228
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 148
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 149 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 194
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 242
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V++G G +AVK F + +E E I + V+L H N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVML---RHENILGFIA 67
Query: 139 CCLE---TEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLH-----SA 183
+ T L + D+H + + +T E +++A A L++LH +
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLEPE 238
I HRD+KS NIL+ + +AD G + + D T I GT Y+ PE
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 239 YHQSS------QLTDKSDVYSFGVVLVEL 261
S + ++D+Y+ G+V E+
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 88/221 (39%), Gaps = 60/221 (27%)
Query: 77 RILGQGGQGTVYKGMLEDGRI---MAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
R +G G G+V D R+ +AVKK L+ + L+ E+ +L + H NV
Sbjct: 34 RPVGSGAYGSVCSAY--DARLRQKVAVKK--LSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 134 VKLL----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIAT 171
+ LL G L V L D H ++ +
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEH----------VQFLVYQ 139
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
+ G L Y+HSA I HRD+K +N+ ++E ++ DFG +A T T
Sbjct: 140 LLRG-LKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFG----LARQADEEMTGYVAT 191
Query: 232 FGYLEPE-------YHQSSQLTDKSDVYSFGVVLVELLTGK 265
Y PE Y+Q+ D++S G ++ ELL GK
Sbjct: 192 RWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGK 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + ++ + E+ +L + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKK--LSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 149
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 150 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 195
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V++G G +AVK F + +E E I + V+L H N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVML---RHENILGFIA 64
Query: 139 CCLE---TEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLH-----SA 183
+ T L + D+H + + +T E +++A A L++LH +
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLEPE 238
I HRD+KS NIL+ + +AD G + + D T I GT Y+ PE
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 239 YHQSS------QLTDKSDVYSFGVVLVEL 261
S + ++D+Y+ G+V E+
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLD--ERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
++ +SY H+ + HRD+K N LLD R K+ADFG SK + H K
Sbjct: 123 QLISGVSYAHAMQ---VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL---HSQPKSA 176
Query: 230 -GTFGYLEPEYHQSSQLTDK-SDVYSFGVVLVELLTGKKP 267
GT Y+ PE + K +DV+S GV L +L G P
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYV 183
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 149
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 150 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 195
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 60/250 (24%)
Query: 61 FSSKELDKA----TNHFNVNRILGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKL 115
F +EL+K + +G G G+V ++ G +AVKK L+ + ++
Sbjct: 37 FYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKK--LSRPFQSIIHA 94
Query: 116 EEFINEIVILSQINHRNVVKLL----------------------GCCLETEVPLLHLHDH 153
+ E+ +L + H NV+ LL G L V L D
Sbjct: 95 KRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 154
Query: 154 HRNEEFPLTWEIRLRIATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGT 213
H ++ I + G L Y+HSA I HRD+K +N+ ++E K+ DFG
Sbjct: 155 H----------VQFLIYQILRG-LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL 200
Query: 214 SKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKK 266
++ + T GY+ ++++ ++ D++S G ++ ELLTG+
Sbjct: 201 ARHTDDEMT----------GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
Query: 267 PIFSTGNTSQ 276
T + +Q
Sbjct: 251 LFPGTDHINQ 260
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 183
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 149
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 150 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 195
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V++G G +AVK F + +E E I + V+L H N++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVML---RHENILGFIA 70
Query: 139 CCLE---TEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLH-----SA 183
+ T L + D+H + + +T E +++A A L++LH +
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLEPE 238
I HRD+KS NIL+ + +AD G + + D T I GT Y+ PE
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 239 YHQSS------QLTDKSDVYSFGVVLVEL 261
S + ++D+Y+ G+V E+
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 139
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 140 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 185
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T
Sbjct: 156 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 203
Query: 232 FGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
GY+ ++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 204 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 254
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 160
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 161 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATR 209
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 254
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLD--ERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
++ +SY H+ + HRD+K N LLD R K+ DFG SK + +T
Sbjct: 122 QLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-- 176
Query: 230 GTFGYLEPEYHQSSQLTDK-SDVYSFGVVLVELLTGKKP 267
GT Y+ PE + K +DV+S GV L +L G P
Sbjct: 177 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 139
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 140 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 185
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLD--ERYRAKVADFGTSKFIAMDQTHVTTKIQ 229
++ +SY H+ + HRD+K N LLD R K+ DFG SK + +T
Sbjct: 123 QLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-- 177
Query: 230 GTFGYLEPEYHQSSQLTDK-SDVYSFGVVLVELLTGKKP 267
GT Y+ PE + K +DV+S GV L +L G P
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 139
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 140 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 185
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 143
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 144 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 189
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 237
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 142
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 143 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 188
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 183
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 234
A+ ++HS I HRDIK N+L++ + K+ DFG++K + + V I F Y
Sbjct: 153 AVGFIHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAX-ICSRF-Y 207
Query: 235 LEPEYH-QSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTS 275
PE +++ T D++S G V EL+ G KP+FS G TS
Sbjct: 208 RAPELMLGATEYTPSIDLWSIGCVFGELILG-KPLFS-GETS 247
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 144
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 145 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 193
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 188 IYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQSSQ 244
+ HR++K N+LL + + K+ADFG + + +Q GT GYL PE +
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDP 189
Query: 245 LTDKSDVYSFGVVLVELLTGKKPIF 269
D+++ GV+L LL G P +
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFW 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V++G G +AVK F + +E E I + V+L H N++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVML---RHENILGFIA 90
Query: 139 CCLE---TEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLH-----SA 183
+ T L + D+H + + +T E +++A A L++LH +
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLEPE 238
I HRD+KS NIL+ + +AD G + + D T I GT Y+ PE
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 239 YHQSS------QLTDKSDVYSFGVVLVEL 261
S + ++D+Y+ G+V E+
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 143
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 144 -LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT----------GYV 189
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 237
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVT 225
I ++ A+ +LHS I HRD+K N+L + + K+ DFG +K Q +
Sbjct: 133 IMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQ 187
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
T + Y+ PE + D++S GV++ LL G P +S NT Q
Sbjct: 188 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS--NTGQ 235
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 142
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 143 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 191
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V++G G +AVK F + +E E I + V+L H N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVML---RHENILGFIA 65
Query: 139 CCLE---TEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLH-----SA 183
+ T L + D+H + + +T E +++A A L++LH +
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLEPE 238
I HRD+KS NIL+ + +AD G + + D T I GT Y+ PE
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 239 YHQSS------QLTDKSDVYSFGVVLVEL 261
S + ++D+Y+ G+V E+
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 136
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 137 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 185
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 186 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 157
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 158 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 203
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 139
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 140 -LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT----------GYV 185
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILL--DERYRAKVADFGTSK-FIAMDQTH-- 223
I ++ AL YLH+ I HRDIK N L ++ + K+ DFG SK F ++
Sbjct: 173 IMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYY 229
Query: 224 -VTTKIQGTFGYLEPEYHQSSQLT--DKSDVYSFGVVLVELLTGKKP 267
+TTK GT ++ PE ++ + K D +S GV+L LL G P
Sbjct: 230 GMTTK-AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH----------VQFLIYQILRG 137
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TF 232
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ H ++ G T
Sbjct: 138 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 233 GYLEPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 276
Y PE + +++ D++S G ++ ELLTG+ T + Q
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 172 EVAGALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 231
++ L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 186
Query: 232 FGYLEPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
GY+ ++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 187 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 237
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 56/228 (24%)
Query: 79 LGQGGQGTVYKGM-LEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLL 137
+G G G+V + G +AVKK + ++ + E+ +L + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 138 ----------------------GCCLETEVPLLHLHDHHRNEEFPLTWEIRLRIATEVAG 175
G L V L D H ++ I + G
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH----------VQFLIYQILRG 156
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 235
L Y+HSA I HRD+K +N+ ++E K+ DFG ++ + T GY+
Sbjct: 157 -LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYV 202
Query: 236 EPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
++++ ++ D++S G ++ ELLTG+ T + Q
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 250
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 169 IATEVAGALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVT 225
I ++ A+ +LHS I HRD+K N+L + + K+ DFG +K Q +
Sbjct: 114 IMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQ 168
Query: 226 TKIQGTFGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 276
T + Y+ PE + D++S GV++ LL G P +S NT Q
Sbjct: 169 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS--NTGQ 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 79 LGQGGQGTVYKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNVVKLLG 138
+G+G G V++G G +AVK F + +E E I + V+L H N++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVML---RHENILGFIA 103
Query: 139 CCLE---TEVPLLHLHDHHRN-------EEFPLTWEIRLRIATEVAGALSYLH-----SA 183
+ T L + D+H + + +T E +++A A L++LH +
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 184 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GTFGYLEPE 238
I HRD+KS NIL+ + +AD G + + D T I GT Y+ PE
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 239 YHQSS------QLTDKSDVYSFGVVLVEL 261
S + ++D+Y+ G+V E+
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 77 RILGQGGQGTV---YKGMLEDGRIMAVKKFKLAVDDEELLKLEEFINEIVILSQINHRNV 133
+ +G G QG V + +L G +AVKK ++ K E+V+L +NH+N+
Sbjct: 28 KPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAK--RAYRELVLLKCVNHKNI 83
Query: 134 VKLLGCCLETEVPLLHLHDHHRNEEF---PLTWEIRLRIATEVAGALSY--------LHS 182
+ LL + L D + E L I + + E L Y LHS
Sbjct: 84 ISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS 142
Query: 183 AASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLEPEYHQS 242
A I HRD+K +NI++ K+ DFG ++ + + + T T Y PE
Sbjct: 143 AG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN--FMMTPYVVTRYYRAPEVILG 197
Query: 243 SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 278
+ D++S G ++ EL+ G T + Q N
Sbjct: 198 MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWN 233
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 176 ALSYLHSAASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQ-GT 231
AL Y H + I HRD+K N+LL + + K+ DFG + I + ++ + + GT
Sbjct: 142 ALRYCHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGT 196
Query: 232 FGYLEPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAFFVHSMRK 291
++ PE + DV+ GV+L LL+G P + T E + + ++ +
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQW 256
Query: 292 NHMYDILDDQVVKLV 306
+H+ + D V +++
Sbjct: 257 SHISESAKDLVRRML 271
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,929,789
Number of Sequences: 62578
Number of extensions: 396317
Number of successful extensions: 3474
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 1106
Number of HSP's gapped (non-prelim): 1198
length of query: 366
length of database: 14,973,337
effective HSP length: 100
effective length of query: 266
effective length of database: 8,715,537
effective search space: 2318332842
effective search space used: 2318332842
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)