BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037299
(1111 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189409278|gb|ACC60970.1| phytochrome B [Vitis riparia]
Length = 1129
Score = 2020 bits (5233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 972/1136 (85%), Positives = 1037/1136 (91%), Gaps = 35/1136 (3%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
M+S ++ Q H + AQSSGTSN+R +H T+SM SKAIAQYT+DARLHAV+EQSGE
Sbjct: 1 MSSGNRGTQSHHQ----AQSSGTSNLRVYH--TDSM--SKAIAQYTMDARLHAVYEQSGE 52
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
SGKSFDYSQSVRT + SVPEQQI+AYLSKIQRGGHIQPFGC +AVDEATFRVIA+SENA
Sbjct: 53 SGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAR 112
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
EMLGL PQSVP+LEK EIL +GTDVRTLFT SS+VLLEKAFGAREITLLNP+WIHSKN+G
Sbjct: 113 EMLGLTPQSVPSLEKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSG 172
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDI LLC+
Sbjct: 173 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCE 232
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVVE+VR+LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLF+Q
Sbjct: 233 TVVENVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQ 292
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHATP+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLA+AVIIN
Sbjct: 293 NRVRMIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIIN 352
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
G+DEEA+GGR+ RLW AFGLQLNMELQLASQLSE
Sbjct: 353 GSDEEAIGGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSE 412
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GKYYP GVTPTE QIKD
Sbjct: 413 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYLGKYYPTGVTPTEAQIKD 472
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I EWLL H DSTGLSTDSLADAGYP AA+LGDAVCGMAVAYIT RDFLFWFRSHTAKEI
Sbjct: 473 IAEWLLANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEI 532
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSF+DA
Sbjct: 533 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDA 592
Query: 575 -EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVA 633
+ SNSKAV++AQL +LELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVA
Sbjct: 593 TDGSNSKAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVA 652
Query: 634 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAV 693
ELTGLSVEEAMGKSLVHDLVYKE EE VD LLHHAL+GEEDKNVEIKLRTF ++ KKAV
Sbjct: 653 ELTGLSVEEAMGKSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTFDSQQHKKAV 712
Query: 694 FVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 753
FVVVNACSS+DYTNNIVGVCFVGQDVT QK+VMDKFIHIQGDYKAIVHSPNPLIPPIFAS
Sbjct: 713 FVVVNACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 772
Query: 754 DENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQ 813
DENT CSEWNTAMEKLTGWSRGDIIGKMLVGE+FGS CRLKGPDALTKFMI LHNA GGQ
Sbjct: 773 DENTVCSEWNTAMEKLTGWSRGDIIGKMLVGEIFGSSCRLKGPDALTKFMIVLHNAIGGQ 832
Query: 814 DTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKK 873
DT+KFPF FD+NGKYVQALLTANKRVN+EGQI+GAFCFLQIASPELQQAL VQRQQEKK
Sbjct: 833 DTDKFPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKK 892
Query: 874 CFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVD 933
CFAR+KELAYICQEIKNPLSG+ FTNSLLEATDLTEDQKQ LETSAACEKQM KII+DVD
Sbjct: 893 CFARMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVD 952
Query: 934 LESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARI 993
L+SIEDGSLE E+AEFLLGSVINAVVSQVM+LLRER+LQLIRDIPEE+KTLAVYGDQ RI
Sbjct: 953 LDSIEDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRI 1012
Query: 994 QQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQD 1053
QQVLADFLLNMVRY+PS +GW+EI VRP LKQ SE ++H EFRMVCPGEGLPP L+QD
Sbjct: 1013 QQVLADFLLNMVRYAPSPDGWIEIQVRPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQD 1072
Query: 1054 MFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSKSI 1109
MFHSSRWMTQEGLGLSMCRKILKL+NGEVQYIRESERCYFLI ELP+PRRGSKS+
Sbjct: 1073 MFHSSRWMTQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPIPRRGSKSV 1128
>gi|225431962|ref|XP_002278263.1| PREDICTED: phytochrome B-like [Vitis vinifera]
Length = 1129
Score = 2016 bits (5222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 971/1136 (85%), Positives = 1035/1136 (91%), Gaps = 35/1136 (3%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
M+S ++ Q H + AQSSGTSN+R +H T+SM SKAIAQYT+DARLHAV+EQSGE
Sbjct: 1 MSSGNRGTQSHHQ----AQSSGTSNLRVYH--TDSM--SKAIAQYTMDARLHAVYEQSGE 52
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
SGKSFDYSQSVRT + SVPEQQI+AYLSKIQRGGHIQPFGC +AVDEATFRVIA+SENA
Sbjct: 53 SGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAR 112
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
EMLGL PQSVP+LEK EIL +GTDVRTLFT SS+VLLEKAFGAREITLLNP+WIHSKN+G
Sbjct: 113 EMLGLTPQSVPSLEKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSG 172
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDI LLC+
Sbjct: 173 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCE 232
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVVE+VR+LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLF+Q
Sbjct: 233 TVVENVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQ 292
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHATP+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGS ASLA+AVIIN
Sbjct: 293 NRVRMIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIIN 352
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR+ RLW AFGLQLNMELQLASQLSE
Sbjct: 353 GNDEEAIGGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSE 412
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALY QGKYYP GVTPTE QIKD
Sbjct: 413 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKD 472
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I EWLL H DSTGLSTDSLADAGYP AA+LGDAVCGMAVAYIT RDFLFWFRSHTAKEI
Sbjct: 473 IAEWLLANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEI 532
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSF+DA
Sbjct: 533 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDA 592
Query: 575 -EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVA 633
+ SNSKAV++AQL +LELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVA
Sbjct: 593 TDGSNSKAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVA 652
Query: 634 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAV 693
ELTGLSVEEAMGKSLVHDLVYKE EE VD LLHHAL+GEEDKNVEIKLRTF ++ KKAV
Sbjct: 653 ELTGLSVEEAMGKSLVHDLVYKESEETVDKLLHHALQGEEDKNVEIKLRTFDSQQHKKAV 712
Query: 694 FVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 753
FVVVNACSS+DYTNNIVGVCFVGQDVT QK+VMDKFIHIQGDYKAIVHSPNPLIPPIFAS
Sbjct: 713 FVVVNACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 772
Query: 754 DENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQ 813
DENT CSEWNTAMEKLTGWSRGDIIGKMLVGE+FGS CRLKGPDALTKFMI LHNA GGQ
Sbjct: 773 DENTVCSEWNTAMEKLTGWSRGDIIGKMLVGEIFGSSCRLKGPDALTKFMIVLHNAIGGQ 832
Query: 814 DTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKK 873
DT+KFPF FD+NGKYVQALLTANKRVN+EGQI+GAFCFLQIASPELQQAL VQRQQEKK
Sbjct: 833 DTDKFPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKK 892
Query: 874 CFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVD 933
CFAR+KELAYICQEIKNPLSG+ FTNSLLEATDLTEDQKQ LETSAACEKQM KII+DVD
Sbjct: 893 CFARMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVD 952
Query: 934 LESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARI 993
L+SIEDGSLE E+AEFLLGSVINAVVSQVM+LLRER+LQLIRDIPEE+KTLAVYGDQ RI
Sbjct: 953 LDSIEDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRI 1012
Query: 994 QQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQD 1053
QQVLADFLLNMVRY+PS +GW+EI V P LKQ SE ++H EFRMVCPGEGLPP L+QD
Sbjct: 1013 QQVLADFLLNMVRYAPSPDGWIEIQVHPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQD 1072
Query: 1054 MFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSKSI 1109
MFHSSRWMTQEGLGLSMCRKILKL+NGEVQYIRESERCYFLI ELP+PRRGSKS+
Sbjct: 1073 MFHSSRWMTQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPVPRRGSKSV 1128
>gi|189409279|gb|ACC60966.1| phytochrome B [Vitis vinifera]
Length = 1129
Score = 2009 bits (5206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 968/1136 (85%), Positives = 1034/1136 (91%), Gaps = 35/1136 (3%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
M+S ++ Q H + AQSSGTSN+R +H T+SM SKAIAQYT+DARLHAV+EQSGE
Sbjct: 1 MSSGNRGTQSHHQ----AQSSGTSNLRVYH--TDSM--SKAIAQYTMDARLHAVYEQSGE 52
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
SGKSFDYSQSVRT + SVPEQQI+AYLSKIQRGGHIQPFGC +AVDEATFRVIA+SENA
Sbjct: 53 SGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAR 112
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
EMLGL PQSVP+LEK EIL +GTDVRTLFT SS+VLLEKAF AREITLLNP+WIHSKN+G
Sbjct: 113 EMLGLTPQSVPSLEKPEILLVGTDVRTLFTPSSAVLLEKAFRAREITLLNPVWIHSKNSG 172
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDI LLC+
Sbjct: 173 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCE 232
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVVE+VR+LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLF+Q
Sbjct: 233 TVVENVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQ 292
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHATP+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGS ASLA+AVIIN
Sbjct: 293 NRVRMIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIIN 352
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
G+DEEA+GGR+ RLW AFGLQLNMELQLASQLSE
Sbjct: 353 GSDEEAIGGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSE 412
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQGKYYP GVTPTE QIKD
Sbjct: 413 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPTGVTPTEAQIKD 472
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I EWLL H DSTGLSTDSLADAGYP AA+LGDAVCGMAVAYIT RDFLFWFRSHTAKEI
Sbjct: 473 IAEWLLANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEI 532
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSF+DA
Sbjct: 533 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDA 592
Query: 575 -EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVA 633
+ SNSKAV++AQL +LELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVA
Sbjct: 593 TDGSNSKAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVA 652
Query: 634 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAV 693
ELTGLSVEEAMGKSLVHDLVYKE EE VD LLHHAL+GEEDKNVEIKLRTF ++ KKAV
Sbjct: 653 ELTGLSVEEAMGKSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTFDSQQHKKAV 712
Query: 694 FVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 753
FVVVNACSS+DYTNNIVGVCFVGQDVT QK+VMDKFIHIQGDYKAIVHSPNPLIPPIFAS
Sbjct: 713 FVVVNACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 772
Query: 754 DENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQ 813
DENT CSEWNTAMEKLTGWSRGDIIGK+LVGE+FGS CRLKGPDALTKFMI LHNA GGQ
Sbjct: 773 DENTVCSEWNTAMEKLTGWSRGDIIGKILVGEIFGSSCRLKGPDALTKFMIVLHNAIGGQ 832
Query: 814 DTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKK 873
DT+KFPF FD+NGKYVQALLTANKRVN+EGQI+GAFCFLQIASPELQQAL VQRQQEKK
Sbjct: 833 DTDKFPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKK 892
Query: 874 CFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVD 933
CFAR+KELAYICQEIKNPLSG+ FTNSLLEATDLTEDQKQ LETSAACEKQM KII+DVD
Sbjct: 893 CFARMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVD 952
Query: 934 LESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARI 993
L+SIEDGSLE E+AEFLLGSVINAVVSQVM+LLRER+LQLIRDIPEE+KTLAVYGDQ RI
Sbjct: 953 LDSIEDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRI 1012
Query: 994 QQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQD 1053
QQVLADFLLNMVRY+PS +GW+EI V P LKQ SE ++H EFRMVCPGEGLPP L+QD
Sbjct: 1013 QQVLADFLLNMVRYAPSPDGWIEIQVCPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQD 1072
Query: 1054 MFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSKSI 1109
MFHSSRWMTQEGLGLSMCRKILKL+NGEVQYIRESERCYFLI ELP+P RGSKS+
Sbjct: 1073 MFHSSRWMTQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPIPHRGSKSV 1128
>gi|255556392|ref|XP_002519230.1| phytochrome B, putative [Ricinus communis]
gi|223541545|gb|EEF43094.1| phytochrome B, putative [Ricinus communis]
Length = 1141
Score = 2003 bits (5189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 955/1119 (85%), Positives = 1025/1119 (91%), Gaps = 30/1119 (2%)
Query: 16 SAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMS 75
+ AQSSGTSN+RAH+ TESM SKAIAQYTVDA+LHAVFEQSG SGKSFDYSQSVRT +
Sbjct: 25 TTAQSSGTSNLRAHN--TESM--SKAIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTN 80
Query: 76 HSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEK 135
S+ EQQI+AYLSKIQRGGHIQPFGC IAVDEA+FRVIAYSENA E+LGL PQSVP+LEK
Sbjct: 81 QSIAEQQITAYLSKIQRGGHIQPFGCMIAVDEASFRVIAYSENARELLGLMPQSVPSLEK 140
Query: 136 QEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
EIL+IGTDVRTLFT SS++LLEKAFGAREITLLNP+WIHSKN+GKPFYAILHR+DVGIV
Sbjct: 141 PEILSIGTDVRTLFTQSSALLLEKAFGAREITLLNPLWIHSKNSGKPFYAILHRIDVGIV 200
Query: 196 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRV 255
IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP GD++LLCDTVVE VR+LTGYDRV
Sbjct: 201 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPSGDVRLLCDTVVECVRELTGYDRV 260
Query: 256 MVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLC 315
MVY+FHEDEHGEVVAE+K+PDLEPY GLHYPATDIPQASRFLFKQ+RVRMIVDCHATP+
Sbjct: 261 MVYKFHEDEHGEVVAENKQPDLEPYIGLHYPATDIPQASRFLFKQSRVRMIVDCHATPVS 320
Query: 316 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRL 375
+IQDE LMQPLCLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGND+EA+GGRS+ RL
Sbjct: 321 IIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDDEAIGGRSSMRL 380
Query: 376 W--------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 409
W AFGLQLNMELQLASQL EKHVLRTQTLLCDMLL
Sbjct: 381 WGLVVCHHTSARSIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLL 440
Query: 410 RDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGL 469
RDSP GIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTP E QIKDIVEWLL +HGDSTGL
Sbjct: 441 RDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPAEAQIKDIVEWLLAFHGDSTGL 500
Query: 470 STDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 529
STDSLADAGYP AA LGDAVCGMAVAYIT +DFLFWFRSHTAKEIKWGGAKHHPEDKDD
Sbjct: 501 STDSLADAGYPGAALLGDAVCGMAVAYITNKDFLFWFRSHTAKEIKWGGAKHHPEDKDDS 560
Query: 530 QRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVD 589
QRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA+NSKAV NAQL
Sbjct: 561 QRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEATNSKAVANAQLRG 620
Query: 590 LELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLV 649
LELQG+DELSSVAREMVRLIETATAPIFAVD+ GC+NGWNAKVAELTGLSVEEAMGKSLV
Sbjct: 621 LELQGMDELSSVAREMVRLIETATAPIFAVDIDGCINGWNAKVAELTGLSVEEAMGKSLV 680
Query: 650 HDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNI 709
HDL+YKE +E VD LL AL+GEEDKN+EIK+RTFG + KKAVFVVVNACSSKDY NNI
Sbjct: 681 HDLIYKESKETVDQLLRRALRGEEDKNIEIKMRTFGFGHEKKAVFVVVNACSSKDYMNNI 740
Query: 710 VGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKL 769
VGVCFVGQD+T QK+VMDKFIHIQGDY+AIVHSPNPLIPPIFASDENTCC EWNTAMEKL
Sbjct: 741 VGVCFVGQDITGQKVVMDKFIHIQGDYRAIVHSPNPLIPPIFASDENTCCLEWNTAMEKL 800
Query: 770 TGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKY 829
TGW++G+IIGKMLVGEVFGSCCRLK PD LT+FMI LHNA GGQDT+KFPF FD+NGK
Sbjct: 801 TGWAQGEIIGKMLVGEVFGSCCRLKSPDVLTRFMIVLHNAIGGQDTDKFPFSFFDKNGKV 860
Query: 830 VQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIK 889
VQALLTA+KRVNM+GQI+GAFCFLQIASPELQQAL QRQQEKK F R+KELAYICQEIK
Sbjct: 861 VQALLTASKRVNMDGQIIGAFCFLQIASPELQQALKAQRQQEKKGFTRMKELAYICQEIK 920
Query: 890 NPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEF 949
NPLSG+ FTNSLLEATDLTEDQKQ LETSAACEKQ+LKII+DVDLESIEDGSLE EK EF
Sbjct: 921 NPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQILKIIRDVDLESIEDGSLELEKGEF 980
Query: 950 LLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSP 1009
LLGSVINAVVSQVM+LLRERNLQLIRDIP+EIKTLAVYGDQ RIQQVLADFLLNMVR +P
Sbjct: 981 LLGSVINAVVSQVMLLLRERNLQLIRDIPDEIKTLAVYGDQVRIQQVLADFLLNMVRCAP 1040
Query: 1010 SAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLS 1069
S++GWVEIHV PTLKQ +EG T++H EFRMVCPGEGLPPELVQDMFHSSRW +QEGLGLS
Sbjct: 1041 SSDGWVEIHVHPTLKQITEGLTVMHTEFRMVCPGEGLPPELVQDMFHSSRWTSQEGLGLS 1100
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSKS 1108
MCRKILKLM GEVQYIRESERCYFL++ +LP+PRRGSKS
Sbjct: 1101 MCRKILKLMQGEVQYIRESERCYFLVVLDLPIPRRGSKS 1139
>gi|224101559|ref|XP_002312330.1| predicted protein [Populus trichocarpa]
gi|222852150|gb|EEE89697.1| predicted protein [Populus trichocarpa]
Length = 1142
Score = 1998 bits (5175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 962/1124 (85%), Positives = 1026/1124 (91%), Gaps = 36/1124 (3%)
Query: 7 HQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFD 66
HQ Q AAQSSGTSN+R HH+ATES VSKAIAQYTVDA+LHAVFEQSG SGKSFD
Sbjct: 14 HQNQ------AAQSSGTSNMRQHHHATES--VSKAIAQYTVDAQLHAVFEQSGGSGKSFD 65
Query: 67 YSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLA 126
YSQSVRT S SVPE+QI+AYLSKIQRGGHIQPFGC IAVDE +FRVIAYSENA EMLGL
Sbjct: 66 YSQSVRTTSQSVPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGLT 125
Query: 127 PQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAI 186
PQSVP+L+KQEIL+ GTDVRTLF SSS +LEKAFGAREITLLNPIWIHSKN+GKPFYAI
Sbjct: 126 PQSVPSLDKQEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAI 185
Query: 187 LHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESV 246
LHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVR+ISQLQSLPGGDIKLLCDTVVESV
Sbjct: 186 LHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESV 245
Query: 247 RQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMI 306
R+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQNRVRMI
Sbjct: 246 RELTGYDRVMVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMI 305
Query: 307 VDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA 366
VDCHATP+ VIQDE LMQPLCLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGN+EEA
Sbjct: 306 VDCHATPVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEEA 365
Query: 367 VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVLRT 400
+GGR++TRLW AFGLQLNMELQLASQLSEKHVLRT
Sbjct: 366 IGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRT 425
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKDIVEWLL
Sbjct: 426 QTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLL 485
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
HGDSTGLSTDSLADAGYP AA+LG+AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK
Sbjct: 486 ALHGDSTGLSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 545
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHPEDKDDGQRMHPRSSFKAFLEVVKSRSL W+NAEMDAIHSLQLILRDSFRD EA+NSK
Sbjct: 546 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDVEATNSK 605
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
AVV+AQL D ELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVAELTGLSV
Sbjct: 606 AVVHAQLEDTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSV 665
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
++AMGKSLVHDLVYKEYEE VD LLH AL+GEEDKNVEIKLRTFG+E++KKA+FVVVNAC
Sbjct: 666 DKAMGKSLVHDLVYKEYEETVDKLLHRALRGEEDKNVEIKLRTFGSEHQKKALFVVVNAC 725
Query: 701 SSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCS 760
SSKDY NNIVGVCFVGQDVT QK+VMDK++HIQGDYKAIVHSPNPLIPPIFASDENTCC
Sbjct: 726 SSKDYMNNIVGVCFVGQDVTGQKVVMDKYVHIQGDYKAIVHSPNPLIPPIFASDENTCCL 785
Query: 761 EWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPF 820
EWNTAMEK TGWSRG++IGKMLVGEVFGSCC+LKG DALTKFMIALHNA GGQDT+K PF
Sbjct: 786 EWNTAMEKFTGWSRGEVIGKMLVGEVFGSCCQLKGSDALTKFMIALHNAIGGQDTDKLPF 845
Query: 821 PLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKE 880
FDRNGKYVQALLTANKRVNMEG+IVGAFCFLQIAS ELQQAL VQRQQEKKC AR+KE
Sbjct: 846 SFFDRNGKYVQALLTANKRVNMEGEIVGAFCFLQIASNELQQALKVQRQQEKKCSARMKE 905
Query: 881 LAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDG 940
LAYICQEI+NPLSG+ FTNSLLE TDLTEDQKQ LETSAACEKQ+LKI +DVDLESIE+G
Sbjct: 906 LAYICQEIRNPLSGLRFTNSLLENTDLTEDQKQFLETSAACEKQILKITRDVDLESIENG 965
Query: 941 SLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADF 1000
LE EKAEFL GSVINAVVSQ M+LLRERNLQL+RDIPEEIKTL VYGDQARIQQVLADF
Sbjct: 966 LLELEKAEFLFGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLVVYGDQARIQQVLADF 1025
Query: 1001 LLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR--MVCPGEGLPPELVQDMFHSS 1058
LLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EF+ ++ LPPELVQDMFHSS
Sbjct: 1026 LLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHMEFKYALLNSFACLPPELVQDMFHSS 1085
Query: 1059 RWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
RW+TQEGLGLSMCRKILKLMNGEVQYIRESERCYFL+I E+PMP
Sbjct: 1086 RWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVILEVPMP 1129
>gi|10954091|gb|AAG25725.1|AF309806_1 phytochrome B1 [Populus trichocarpa]
Length = 1151
Score = 1993 bits (5163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 961/1126 (85%), Positives = 1026/1126 (91%), Gaps = 36/1126 (3%)
Query: 7 HQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFD 66
HQ Q AAQSSGTSN+R HH+ATES VSKAIAQYTVDA+LHAVFEQSG SGKSFD
Sbjct: 14 HQNQ------AAQSSGTSNMRQHHHATES--VSKAIAQYTVDAQLHAVFEQSGGSGKSFD 65
Query: 67 YSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLA 126
YSQSVRT S SVPE+QI+AYLSKIQRGGHIQPFGC IAVDE +FRVIAYSENA EMLGL
Sbjct: 66 YSQSVRTTSQSVPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGLT 125
Query: 127 PQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAI 186
PQSVP+L+KQEIL+ GTDVRTLF SSS +LEKAFGAREI LLNPIWIHSKN+GKPFYAI
Sbjct: 126 PQSVPSLDKQEILSDGTDVRTLFRPSSSAMLEKAFGAREIILLNPIWIHSKNSGKPFYAI 185
Query: 187 LHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESV 246
LHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVR+ISQLQSLPGGDIKLLCDTVVESV
Sbjct: 186 LHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESV 245
Query: 247 RQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMI 306
R+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQNRVRMI
Sbjct: 246 RELTGYDRVMVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMI 305
Query: 307 VDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA 366
VDCHATP+ VIQDE LMQPLCLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGN+EEA
Sbjct: 306 VDCHATPVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEEA 365
Query: 367 VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVLRT 400
+GGR++TRLW AFGLQLNMELQLASQLSEKHVLRT
Sbjct: 366 IGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRT 425
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKDIVEWLL
Sbjct: 426 QTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLL 485
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
HGDSTGLSTDSLADAGYP AA+LG+AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK
Sbjct: 486 ALHGDSTGLSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 545
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHPEDKDDGQRMHPRSSFKAFLEVVKSRSL W+NAEMDAIHSLQLILRDSFRD EA+NSK
Sbjct: 546 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDVEATNSK 605
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
AVV+AQL D ELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVAELTGLSV
Sbjct: 606 AVVHAQLEDTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSV 665
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
++AMGKSLVHDLVYKEYEE VD LLH AL+GEEDKNVEIKLRTFG+E++KKA+FVVVNAC
Sbjct: 666 DKAMGKSLVHDLVYKEYEETVDKLLHRALRGEEDKNVEIKLRTFGSEHQKKALFVVVNAC 725
Query: 701 SSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCS 760
SSKDY NNIVGVCFVGQDVT QK+VMDK++HIQGDYKAIVHSPNPLIPPIFASDENTCC
Sbjct: 726 SSKDYMNNIVGVCFVGQDVTGQKVVMDKYVHIQGDYKAIVHSPNPLIPPIFASDENTCCL 785
Query: 761 EWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPF 820
EWNTAMEK TGWSRG++IGKMLVGEVFGSCC+LKG DALTKFMIALHNA GGQDT+K PF
Sbjct: 786 EWNTAMEKFTGWSRGEVIGKMLVGEVFGSCCQLKGSDALTKFMIALHNAIGGQDTDKLPF 845
Query: 821 PLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKE 880
FDRNGKYVQALLTANKRVNMEG+IVGAFCFLQIAS ELQQAL VQRQQEKKC AR+KE
Sbjct: 846 SFFDRNGKYVQALLTANKRVNMEGEIVGAFCFLQIASNELQQALKVQRQQEKKCSARMKE 905
Query: 881 LAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDG 940
LAYICQEI+NPLSG+ FTNSLLE TDLTEDQKQ LETSAACEKQ+LKI +DVDLESIE+G
Sbjct: 906 LAYICQEIRNPLSGLRFTNSLLENTDLTEDQKQFLETSAACEKQILKITRDVDLESIENG 965
Query: 941 SLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADF 1000
LE EKAEFL GSVINAVVSQ M+LLRERNLQL+RDIPEEIKTL VYGDQARIQQVLADF
Sbjct: 966 LLELEKAEFLFGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLVVYGDQARIQQVLADF 1025
Query: 1001 LLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR--MVCPGEGLPPELVQDMFHSS 1058
LLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EF+ ++ LPPELVQDMFHSS
Sbjct: 1026 LLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHMEFKYALLNSFACLPPELVQDMFHSS 1085
Query: 1059 RWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
RW+TQEGLGLSMCRKILKLMNGEVQYIRESERCYFL+I E+PMP +
Sbjct: 1086 RWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVILEVPMPNK 1131
>gi|464387|sp|P29130.2|PHYB_TOBAC RecName: Full=Phytochrome B
gi|295346|gb|AAA34092.1| type II phytochrome [Nicotiana tabacum]
Length = 1132
Score = 1986 bits (5144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 956/1135 (84%), Positives = 1030/1135 (90%), Gaps = 34/1135 (2%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGES 61
S ++H Q + Q AQSSGTSN+ N +S +SKAIAQYT DARLHAVFEQSGES
Sbjct: 4 GSRTKHSHQSGQGQVQAQSSGTSNV----NYKDS--ISKAIAQYTADARLHAVFEQSGES 57
Query: 62 GKSFDYSQSVRTMSHSV-PEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
GKSFDYSQS++T + SV PEQQI+AYL+KIQRGGHIQPFGC IAVDEA+FRVIAYSENA
Sbjct: 58 GKSFDYSQSIKTTTQSVVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENAC 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
EML L PQSVP+LE+ EILT+GTDVRTLFT SSSVLLE+AFGAREITLLNPIWIHSKN+G
Sbjct: 118 EMLSLTPQSVPSLERPEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGD+KLLCD
Sbjct: 178 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVVESVR+LTGYDRVMVY+FHEDEHGEVVAESK PDLEPY GLHYPATDIPQASRFLFKQ
Sbjct: 238 TVVESVRELTGYDRVMVYKFHEDEHGEVVAESKIPDLEPYIGLHYPATDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHATP+ V+QDE LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL LAVIIN
Sbjct: 298 NRVRMIVDCHATPVRVVQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIIN 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEAVGGRS+ RLW AFGLQLNMELQLASQLSE
Sbjct: 358 GNDEEAVGGRSSMRLWGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIV QSPSIMDLVKCDGAALY QGKYYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVIQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLTYHGDSTGLSTDSLADAGYP AA LGDAVCGMAVAYIT +DFLFWFRSHTAKEI
Sbjct: 478 IVEWLLTYHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEI 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSL LILRDSF+DA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSL-LILRDSFKDA 596
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EASNSKAVV+AQL ++ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 597 EASNSKAVVHAQLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 656
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LT LSVEEAMGKSLVHDLV+KE +E + LL +AL+GEEDKNVEIKLRTFG E KKAVF
Sbjct: 657 LTDLSVEEAMGKSLVHDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGPEQLKKAVF 716
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDYTNNIVGVCFVGQDVT QK+VMDKFIHIQGDYKAIVHSPNPLIPPIFASD
Sbjct: 717 VVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 776
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCCSEWNTAMEKLTGWSRG+IIGKMLVGE+FGSCCRLKGPDA+TKFMI LHNA G QD
Sbjct: 777 ENTCCSEWNTAMEKLTGWSRGEIIGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGVQD 836
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+KFPF FDRNGKYVQALLTANKRVNMEGQI+GAFCF+QIASPELQQAL VQRQQEKKC
Sbjct: 837 TDKFPFSFFDRNGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKC 896
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
++++KELAY+CQEIK+PL+G+ FTNSLLEATDLTE+QKQ LETSAACE+QM KII+DVDL
Sbjct: 897 YSQMKELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSKIIRDVDL 956
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
E+IEDGSL EK EF LGSVI+AVVSQVM+LLRER++QLIRDIPEEIKTL V+GDQ RIQ
Sbjct: 957 ENIEDGSLTLEKEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQ 1016
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDM 1054
QVLADFLLNMVRY+PS +GWVEI ++P +KQ S+ T+VH EFR+VCPGEGLPPELVQDM
Sbjct: 1017 QVLADFLLNMVRYAPSPDGWVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLPPELVQDM 1076
Query: 1055 FHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSKSI 1109
FHSSRW+T+EGLGLSMCRKILKLMNG++QYIRESERCYFLII +LPM RRGSKS+
Sbjct: 1077 FHSSRWVTKEGLGLSMCRKILKLMNGDIQYIRESERCYFLIILDLPMTRRGSKSL 1131
>gi|2370331|emb|CAA74992.1| phytochrome B [Nicotiana plumbaginifolia]
Length = 1135
Score = 1968 bits (5099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 943/1116 (84%), Positives = 1018/1116 (91%), Gaps = 33/1116 (2%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSV-P 79
SGTSN+ N +S +SKAIAQYT DARLHAVFEQSGESGKSFDYSQSV+T + SV P
Sbjct: 25 SGTSNV----NYKDS--ISKAIAQYTADARLHAVFEQSGESGKSFDYSQSVKTTTQSVVP 78
Query: 80 EQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEIL 139
EQQI+AYL+KIQRGGHIQPFGC IAVDEA+F VIAYSENA EML L PQSVP+LE+ EIL
Sbjct: 79 EQQITAYLTKIQRGGHIQPFGCMIAVDEASFGVIAYSENACEMLSLTPQSVPSLERPEIL 138
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
T+GTDVRTLFT SSSVLLE+AFGAREITLLNPIWIHSKN+GKPFYAILHRVDVGIVIDLE
Sbjct: 139 TVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLE 198
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
PA+TEDPALSIAGAVQSQKLAVRAIS LQSLPGGD+K+LCDTVVESVR+LTGYDRVMVY+
Sbjct: 199 PAKTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKILCDTVVESVRELTGYDRVMVYK 258
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAESKRPDLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+ V+QD
Sbjct: 259 FHEDEHGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVVQD 318
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW--- 376
E LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL LAVIINGNDEEAVGGRS+ RLW
Sbjct: 319 ESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMRLWGLV 378
Query: 377 -----------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSP 413
AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSP
Sbjct: 379 VGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSP 438
Query: 414 AGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDS 473
GIVTQSPSIMDLVKCDGAALY QGKYYPLGVTPTE QIKDIVEWLLTYHGDSTGLSTDS
Sbjct: 439 TGIVTQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGLSTDS 498
Query: 474 LADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMH 533
LADAGYP AA LGDAVCGMAVAYIT +DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMH
Sbjct: 499 LADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMH 558
Query: 534 PRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQ 593
PRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSF+DAEASNS AVV+AQL ++ELQ
Sbjct: 559 PRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEASNSMAVVHAQLGEMELQ 618
Query: 594 GVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLV 653
G+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAELT LSVEEAMGKSLVHDLV
Sbjct: 619 GIDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTDLSVEEAMGKSLVHDLV 678
Query: 654 YKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVC 713
++E +E +NLL +AL+GEEDKNVE+KLRTFG+E KKAVFVVVNACSSKDYTNNIVGVC
Sbjct: 679 HEESQETAENLLFNALRGEEDKNVEMKLRTFGSEQPKKAVFVVVNACSSKDYTNNIVGVC 738
Query: 714 FVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWS 773
FVGQDVT QK+VMDKFIHIQGDYKAIVHSPNPLIPPIF SDENTCCSEWNTAME LTGWS
Sbjct: 739 FVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFVSDENTCCSEWNTAMENLTGWS 798
Query: 774 RGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQAL 833
RG+IIGKMLVGE FGSCCRLKGPDA+TKFMI LHNA GGQDT+KFPF DRNGKYVQAL
Sbjct: 799 RGEIIGKMLVGETFGSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFSDRNGKYVQAL 858
Query: 834 LTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLS 893
LTANKRVNMEGQI+GAFCF+QIASPELQQAL VQRQQ+KKC++++KELAY+CQEIK+PL+
Sbjct: 859 LTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQDKKCYSQMKELAYLCQEIKSPLN 918
Query: 894 GVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGS 953
G+ FTNSLLEATDLTEDQKQ LETS ACE+QM KII+DVDLE+IEDGSL +K EF LGS
Sbjct: 919 GIRFTNSLLEATDLTEDQKQYLETSTACERQMSKIIRDVDLENIEDGSLTLDKEEFFLGS 978
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
VI+AVVSQVM+LLRER++QLIRDIPEEIKTL V+GDQ RIQQVLADFLLNMVRY+PS +G
Sbjct: 979 VIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVRYAPSPDG 1038
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRK 1073
WVEI ++P +KQ S+ T+VH EFR+VCPGEGLPPELVQDMFHS+RW+T+EGLGLSMCRK
Sbjct: 1039 WVEIQLQPNMKQISDEVTVVHIEFRIVCPGEGLPPELVQDMFHSNRWVTKEGLGLSMCRK 1098
Query: 1074 ILKLMNGEVQYIRESERCYFLIIFELPMPRRGSKSI 1109
ILKLMNGE+QYIRESERCYFLII +LPM RGSKS+
Sbjct: 1099 ILKLMNGEIQYIRESERCYFLIILDLPMTGRGSKSV 1134
>gi|85679505|gb|ABC72086.1| phytochrome B [Solanum tuberosum]
Length = 1130
Score = 1966 bits (5094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 944/1136 (83%), Positives = 1026/1136 (90%), Gaps = 34/1136 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS S+ + H S S AQSSGTSN+ N +S +SKAIAQYT DARLHAVFEQSGE
Sbjct: 1 MASGSRTKHSHHNS-SQAQSSGTSNV----NYKDS--ISKAIAQYTADARLHAVFEQSGE 53
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
SGK FDYS+SV+T + SVPE+QI+AYL+KIQRGGHIQPFGC IAVDEA+FRVIAYSENA
Sbjct: 54 SGKFFDYSESVKTTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENAF 113
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
EML L PQSVP+LEK EILTIGTDVRTLFT SSSVLLE+AFGAREITLLNPIWIHSKN+G
Sbjct: 114 EMLSLTPQSVPSLEKCEILTIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSG 173
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHRVDVGI IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCD
Sbjct: 174 KPFYAILHRVDVGIAIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCD 233
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVVESVR+LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQ
Sbjct: 234 TVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQ 293
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHATP+ V QDE LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL LAVIIN
Sbjct: 294 NRVRMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIIN 353
Query: 361 GNDEEAVGG-RSTTRLW--------------------------AFGLQLNMELQLASQLS 393
GNDEEAVGG R++ RLW AFGLQLNMELQLASQLS
Sbjct: 354 GNDEEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLS 413
Query: 394 EKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIK 453
EKHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE QIK
Sbjct: 414 EKHVLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIK 473
Query: 454 DIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKE 513
DIVEWLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMAVAYI+ +DFLFWFRSHTAKE
Sbjct: 474 DIVEWLLAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYISSKDFLFWFRSHTAKE 533
Query: 514 IKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRD 573
IKWGGAKHHPEDKDDG RMHPRSSFKAFLEVVKSRS PW+NAEMDAIHSLQLILRDSF+D
Sbjct: 534 IKWGGAKHHPEDKDDGLRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKD 593
Query: 574 AEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVA 633
AEASNSKA+V+A L ++ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVA
Sbjct: 594 AEASNSKAIVHAHLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 653
Query: 634 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAV 693
ELTGLSVEEAMGKSLVH+LVYKE +E + LL++AL+GEEDKNVEIKLRTFGAE +KAV
Sbjct: 654 ELTGLSVEEAMGKSLVHELVYKESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAV 713
Query: 694 FVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 753
FVVVNAC+SKDYTNNIVGVCFVGQDVT +K+VMDKFI+IQGDYKAIVHSPNPLIPPIFAS
Sbjct: 714 FVVVNACASKDYTNNIVGVCFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFAS 773
Query: 754 DENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQ 813
DENTCCSEWNTAMEKLTGWSRG+I+GKMLVGE+FGSCCRLKGPDA+TKFMI LHNA GGQ
Sbjct: 774 DENTCCSEWNTAMEKLTGWSRGEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQ 833
Query: 814 DTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKK 873
DT+KFPF FDRNGKYVQALLTANKRVNMEG +GAFCF+QIASPELQQAL VQRQQEKK
Sbjct: 834 DTDKFPFSFFDRNGKYVQALLTANKRVNMEGNTIGAFCFIQIASPELQQALRVQRQQEKK 893
Query: 874 CFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVD 933
C++++KELAYICQEIK+PL+G+ FTNSLLEAT+LTE+QKQ LETSAACE+QM KII+DVD
Sbjct: 894 CYSQMKELAYICQEIKSPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDVD 953
Query: 934 LESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARI 993
LE+IEDGSL EK +F LGSVI+AVVSQVM+LLRE+ +QLIRDIPEEIKTL V+GDQ RI
Sbjct: 954 LENIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRI 1013
Query: 994 QQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQD 1053
QQVLADFLLNMVRY+PS +GWVEI +RP++ S+G T VH E R++CPGEGLPPELVQD
Sbjct: 1014 QQVLADFLLNMVRYAPSPDGWVEIQLRPSMMPISDGVTGVHIELRIICPGEGLPPELVQD 1073
Query: 1054 MFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSKSI 1109
MFHSSRW+TQEGLGLS CRK+LKLMNGE+QYIRESERCYFLI+ +LPM R+G KS+
Sbjct: 1074 MFHSSRWVTQEGLGLSTCRKMLKLMNGEIQYIRESERCYFLIVLDLPMTRKGPKSV 1129
>gi|33302622|sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B
gi|2326872|emb|CAA74908.1| phytochrome B [Solanum tuberosum]
Length = 1130
Score = 1962 bits (5082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 937/1115 (84%), Positives = 1016/1115 (91%), Gaps = 33/1115 (2%)
Query: 22 GTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQ 81
GTSN+ N +S +SKAIAQYT DARLHAVFEQSGESGK FDYSQSV+T + SVPE+
Sbjct: 21 GTSNV----NYKDS--ISKAIAQYTADARLHAVFEQSGESGKFFDYSQSVKTTTQSVPER 74
Query: 82 QISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTI 141
QI+AYL+KIQRGGHIQPFGC IAVDEA+FRVIAYSENA EML L PQSVP+LEK EILTI
Sbjct: 75 QITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLEKCEILTI 134
Query: 142 GTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPA 201
GTDVRTLFT SSSVLLE+AFGAREITLLNPIWIHSKN+GKPFYAILHRVDVGIVIDLEPA
Sbjct: 135 GTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLEPA 194
Query: 202 RTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFH 261
RTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVESVR+LTGYDRVMVY+FH
Sbjct: 195 RTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFH 254
Query: 262 EDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEG 321
EDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+ V QDE
Sbjct: 255 EDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVTQDES 314
Query: 322 LMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG-RSTTRLW---- 376
LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL LAVIINGNDEEAVGG R++ RLW
Sbjct: 315 LMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSMRLWGLVV 374
Query: 377 ----------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPA 414
AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSP
Sbjct: 375 GHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPP 434
Query: 415 GIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSL 474
GIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE QIKDIVEWLL YHGDSTGLSTDSL
Sbjct: 435 GIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAYHGDSTGLSTDSL 494
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP AA+LGDAVCGMAVAYIT +DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP
Sbjct: 495 PDAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 554
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEVVKSRS PW+NAEMDAIHSLQLILRDSF+DAEASNSKA+V+A L ++ELQG
Sbjct: 555 RSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASNSKAIVHAHLGEMELQG 614
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAELTG+SVEEAMGKSLVHDLVY
Sbjct: 615 IDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSLVHDLVY 674
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCF 714
KE +E + LL++AL+GEEDKNVEIKLRTFGAE +KAVFVVVNAC+SKDYTNNIVGVCF
Sbjct: 675 KESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAVFVVVNACASKDYTNNIVGVCF 734
Query: 715 VGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSR 774
VGQDVT +K+VMDKFI+IQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSR
Sbjct: 735 VGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSR 794
Query: 775 GDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALL 834
G+I+GKMLVGE+FGSCCRLKGPDA+TKFMI LHNA GGQDT+KFPF FDRNGKYVQALL
Sbjct: 795 GEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRNGKYVQALL 854
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
TANKRVNMEG +GAFCF+QIASPELQQAL VQRQQEKKC++++KELAYICQEIK+PL+G
Sbjct: 855 TANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQEIKSPLNG 914
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+ FTNSLLEAT+LTE+QKQ LETSAACE+QM KII+D+DLE+IEDGSL EK +F LGSV
Sbjct: 915 IRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDIDLENIEDGSLTLEKEDFFLGSV 974
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
I+AVVSQVM+LLRE+ +QLIRDIPEEIKTL V+GDQ RIQQVLADFLLNMVRY+PS +GW
Sbjct: 975 IDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVRYAPSPDGW 1034
Query: 1015 VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKI 1074
VEI +RP++ S+G T+VH E R++CPGEGLPPELVQDMFHSSRW+TQEGLGLSMCRK+
Sbjct: 1035 VEIQLRPSMMPISDGVTVVHIELRIICPGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKM 1094
Query: 1075 LKLMNGEVQYIRESERCYFLIIFELPMPRRGSKSI 1109
LKLMNGE+QYIRESERCYFLII +LPM R+G KS+
Sbjct: 1095 LKLMNGEIQYIRESERCYFLIILDLPMTRKGPKSV 1129
>gi|449516898|ref|XP_004165483.1| PREDICTED: phytochrome B-like [Cucumis sativus]
Length = 1132
Score = 1955 bits (5065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 932/1132 (82%), Positives = 1022/1132 (90%), Gaps = 32/1132 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
M S+++ H++ Q+ + ++ TSN+R+H + +SKAIAQYTVDARLHAVFEQSGE
Sbjct: 1 MVSSNRATHSHQQ-QAQSSNTNTSNLRSHRTDS----ISKAIAQYTVDARLHAVFEQSGE 55
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
SGKSFDYSQS++T + SVPEQQI+AYLSKIQRGGHIQPFGC IA++EA+FRVIAYSENA
Sbjct: 56 SGKSFDYSQSIKTSTQSVPEQQITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENAR 115
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
E+LGL PQSVP+LEK EILTIGTDVR LFTS+S++LLEKAFGAREITLLNP+WIHSKN+G
Sbjct: 116 ELLGLTPQSVPSLEKPEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSG 175
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCD
Sbjct: 176 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCD 235
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVVESVR+LTGYDRVMVY+FHEDEHGEVVAESKRPDLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 236 TVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQ 295
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA+P+ VIQD GLMQ LCLVGSTLRAPHGCHAQYMANMGSIASLA+AV+IN
Sbjct: 296 NRVRMIVDCHASPVRVIQDAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVIN 355
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GND+EA+GGR++TRLW AFGLQLNMELQLASQLSE
Sbjct: 356 GNDDEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSE 415
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE QIKD
Sbjct: 416 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD 475
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLL +HGDSTGLSTDSLADAGYP AA LGDAVCGMAVAYITK+DFLFWFRSHTAKEI
Sbjct: 476 IVEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEI 535
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSF++
Sbjct: 536 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKND 595
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
A NSKAVV+ L DL+LQG+DELSSVAREMVRLIETATAPIFAVD G +NGWNAK+AE
Sbjct: 596 VAINSKAVVHPHLGDLDLQGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAE 655
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAE-NRKKAV 693
LTGL+VEEAMGKSLV DLVYKE EE VD L+ ALKGEEDKN+EIK+RTFG E +++
Sbjct: 656 LTGLAVEEAMGKSLVRDLVYKESEETVDRLVSRALKGEEDKNIEIKMRTFGPEEDQRTPF 715
Query: 694 FVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 753
FVVVNACSS+DYT+NIVGVCFVGQDVT QK+ MDKF+ IQGDYKAI+HSPNPLIPPIFAS
Sbjct: 716 FVVVNACSSRDYTDNIVGVCFVGQDVTCQKVFMDKFVSIQGDYKAIIHSPNPLIPPIFAS 775
Query: 754 DENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQ 813
D+NTCCSEWNTAMEKLTGWSR DIIGKMLVGEVFGSCCRLKGPDALTKFMI LH+A GGQ
Sbjct: 776 DDNTCCSEWNTAMEKLTGWSREDIIGKMLVGEVFGSCCRLKGPDALTKFMIVLHSAIGGQ 835
Query: 814 DTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKK 873
D EK+PF +D+ GKYVQALLTANKR+NMEGQIVGAFCFLQIASPELQQ L +QRQQEK
Sbjct: 836 DNEKYPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQEKN 895
Query: 874 CFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVD 933
FAR+KELAYICQE+K+PLSG+ FTNSLLEATDL+EDQKQ LETS ACEKQMLKII+D+D
Sbjct: 896 RFARMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIEDMD 955
Query: 934 LESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARI 993
LE I+DG++E EK EFLLGSVINAVVSQVM+LLRER+LQLIRDIPEE+KT+AVYGDQ RI
Sbjct: 956 LECIDDGTMELEKGEFLLGSVINAVVSQVMILLRERSLQLIRDIPEEVKTMAVYGDQVRI 1015
Query: 994 QQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQD 1053
QQVLADFLLNMVRY+PS EGWVEI V P LKQ+S+G T+ H EFR+VCPGEGLPPELVQD
Sbjct: 1016 QQVLADFLLNMVRYAPSPEGWVEIRVCPLLKQNSDGITLAHTEFRIVCPGEGLPPELVQD 1075
Query: 1054 MFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRG 1105
MFHS RW+TQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI ELP+ RG
Sbjct: 1076 MFHSGRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLITLELPLTERG 1127
>gi|449432920|ref|XP_004134246.1| PREDICTED: phytochrome B-like [Cucumis sativus]
Length = 1132
Score = 1953 bits (5059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 931/1132 (82%), Positives = 1021/1132 (90%), Gaps = 32/1132 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
M S+++ H++ Q+ + ++ TSN+R+H + +SKAIAQYTVDARLHAVFEQSGE
Sbjct: 1 MVSSNRATHSHQQ-QAQSSNTNTSNLRSHRTDS----ISKAIAQYTVDARLHAVFEQSGE 55
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
SGKSFDYSQS++T + SVPEQQI+AYLSKIQRGGHIQPFGC IA++EA+FRVIAYSENA
Sbjct: 56 SGKSFDYSQSIKTSTQSVPEQQITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENAR 115
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
E+LGL PQSVP+LEK EILTIGTDVR LFTS+S++LLEKAFGAREITLLNP+WIHSKN+G
Sbjct: 116 ELLGLTPQSVPSLEKPEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSG 175
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCD
Sbjct: 176 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCD 235
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVVESVR+LTGYDRVMVY+FHEDEHGEVVAESKRPDLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 236 TVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQ 295
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA+P+ VIQD GLMQ LCLVGSTLRAPHGCHAQYMANMGSIASLA+AV+IN
Sbjct: 296 NRVRMIVDCHASPVRVIQDAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVIN 355
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GND+EA+GGR++TRLW AFGLQLNMELQLASQLSE
Sbjct: 356 GNDDEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSE 415
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE QIKD
Sbjct: 416 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKD 475
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLL +HGDSTGLSTDSLADAGYP AA LGDAVCGMAVAYITK+DFLFWFRSHTAKEI
Sbjct: 476 IVEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEI 535
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSF++
Sbjct: 536 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKND 595
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
A NSKAVV+ L DL+LQG+DELSSVAREMVRLIETATAPIFAVD G +NGWNAK+AE
Sbjct: 596 VAINSKAVVHPHLGDLDLQGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAE 655
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAE-NRKKAV 693
LTGL+VEEAMGKSLV DLVYKE EE VD L+ ALKGEEDKN+EIK+RTFG E +++
Sbjct: 656 LTGLAVEEAMGKSLVRDLVYKESEETVDRLVSRALKGEEDKNIEIKMRTFGPEEDQRTPF 715
Query: 694 FVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 753
FVVVNACSS+DYT+NIVGVCFVGQDVT QK+ MDKF+ IQGDYKAI+HSPNPLIPPIFAS
Sbjct: 716 FVVVNACSSRDYTDNIVGVCFVGQDVTCQKVFMDKFVSIQGDYKAIIHSPNPLIPPIFAS 775
Query: 754 DENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQ 813
D+NTCCSEWNTAMEKLTGWSR DIIGKMLVGEVFGSCCRLKGPDALTKFMI LH+A GGQ
Sbjct: 776 DDNTCCSEWNTAMEKLTGWSREDIIGKMLVGEVFGSCCRLKGPDALTKFMIVLHSAIGGQ 835
Query: 814 DTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKK 873
D EK+PF +D+ GKYVQALLTANKR+NMEGQIVGAFCFLQIASPELQQ L +QRQQEK
Sbjct: 836 DNEKYPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQEKN 895
Query: 874 CFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVD 933
FAR+KELAYICQE+K+PLSG+ FTNSLLEATDL+EDQKQ LETS ACEKQMLKII+D+D
Sbjct: 896 RFARMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIEDMD 955
Query: 934 LESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARI 993
LE I+DG++E EK EFLL SVINAVVSQVM+LLRER+LQLIRDIPEE+KT+AVYGDQ RI
Sbjct: 956 LECIDDGTMELEKGEFLLRSVINAVVSQVMILLRERSLQLIRDIPEEVKTMAVYGDQVRI 1015
Query: 994 QQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQD 1053
QQVLADFLLNMVRY+PS EGWVEI V P LKQ+S+G T+ H EFR+VCPGEGLPPELVQD
Sbjct: 1016 QQVLADFLLNMVRYAPSPEGWVEIRVCPLLKQNSDGITLAHTEFRIVCPGEGLPPELVQD 1075
Query: 1054 MFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRG 1105
MFHS RW+TQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI ELP+ RG
Sbjct: 1076 MFHSGRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLITLELPLTERG 1127
>gi|340007755|gb|AEK26584.1| phytochrome B1 [Populus tremula]
Length = 1128
Score = 1950 bits (5051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 944/1123 (84%), Positives = 1003/1123 (89%), Gaps = 36/1123 (3%)
Query: 7 HQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFD 66
HQ Q AAQSSGTSN+R HH+ATES VSKAIAQYTVDA+LHAVFEQSG SGKSFD
Sbjct: 14 HQNQ------AAQSSGTSNMRQHHHATES--VSKAIAQYTVDAQLHAVFEQSGGSGKSFD 65
Query: 67 YSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLA 126
YSQSVRT S SVPE+QI+AYLSKIQRGGHIQPFGC IAVDE +FRVIAYSENA EMLG
Sbjct: 66 YSQSVRTTSQSVPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGFT 125
Query: 127 PQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAI 186
PQSVP+L+KQEIL+ GTDVRTLF SSS +LEKAFGAREITLLNPIWIHSKN+GKPFYAI
Sbjct: 126 PQSVPSLDKQEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAI 185
Query: 187 LHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESV 246
LHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVR+ISQLQSLPGGDIKLLCDTVVESV
Sbjct: 186 LHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESV 245
Query: 247 RQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMI 306
R+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQNRVRMI
Sbjct: 246 RELTGYDRVMVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMI 305
Query: 307 VDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA 366
VDCHATP+ VIQDE LMQPLCLVGSTLRAPHGCHAQYMANMGSIAS+A+AVIINGN+EEA
Sbjct: 306 VDCHATPVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASMAMAVIINGNEEEA 365
Query: 367 VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVLRT 400
+GGR++TRLW AFGLQLNMELQLASQLSEKHVLRT
Sbjct: 366 IGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRT 425
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYP GVTPTE QIKDIVEWLL
Sbjct: 426 QTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPSGVTPTEAQIKDIVEWLL 485
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
HGDSTGLSTDSLADAGYP AA+LG+AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK
Sbjct: 486 ALHGDSTGLSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 545
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHPEDKDDGQRMHPRSSFKAFLEVVKSRSL W+NAEMDAIHSLQLILRDSFRDAEA+NSK
Sbjct: 546 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDAEATNSK 605
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
AVV QL D ELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVAELTGLSV
Sbjct: 606 AVVRTQLEDTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSV 665
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
E AMGKSLVHDLVYKEYEE VD LLH AL+ IKLRTF +E++KKA+FVVVNAC
Sbjct: 666 ERAMGKSLVHDLVYKEYEETVDKLLHRALRXXXXXXXXIKLRTFDSEHQKKALFVVVNAC 725
Query: 701 SSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCS 760
SSKDY NNIVGVCFVGQDVT QK+VMDK++HIQGDYKAIVHSPNPLIPPIFASDENTCC
Sbjct: 726 SSKDYMNNIVGVCFVGQDVTGQKVVMDKYVHIQGDYKAIVHSPNPLIPPIFASDENTCCL 785
Query: 761 EWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPF 820
EWNTAMEK TGWSRG++IGKMLVGEVFGS C+LKG DALTKFMIALHNA GGQDT+K PF
Sbjct: 786 EWNTAMEKFTGWSRGEVIGKMLVGEVFGSFCQLKGSDALTKFMIALHNAIGGQDTDKLPF 845
Query: 821 PLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKE 880
FDRNGKYVQALLTANKRVNMEG+I+GAFCFLQIAS ELQQAL VQRQQEKKC AR+KE
Sbjct: 846 SFFDRNGKYVQALLTANKRVNMEGEIIGAFCFLQIASNELQQALKVQRQQEKKCSARMKE 905
Query: 881 LAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDG 940
LAYICQEI+NPLSG+ FTNSLLE TDLTEDQKQ LETSAACEKQ+LKI +DVDL
Sbjct: 906 LAYICQEIRNPLSGLRFTNSLLENTDLTEDQKQFLETSAACEKQILKITRDVDLXXXXXX 965
Query: 941 SLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADF 1000
LE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTL VYGDQARIQQVLADF
Sbjct: 966 LLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLVVYGDQARIQQVLADF 1025
Query: 1001 LLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF--RMVCPGEGLPPELVQDMFHSS 1058
LLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EF LPPELVQDMFHSS
Sbjct: 1026 LLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHMEFXXXXXXXXXXLPPELVQDMFHSS 1085
Query: 1059 RWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
RW+TQEGLGLSMCRKILKLMNGEVQYIRESERCYFL+I E+PM
Sbjct: 1086 RWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVILEVPM 1128
>gi|401782504|dbj|BAM36555.1| phytochrome B [Fragaria x ananassa]
Length = 1136
Score = 1947 bits (5044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 928/1125 (82%), Positives = 1010/1125 (89%), Gaps = 44/1125 (3%)
Query: 5 SQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKS 64
S QQQ+R S +AA+S VSKA+AQYTVDARLHAVFEQS ESGKS
Sbjct: 22 SAGQQQNRNSTAAAES-----------------VSKAVAQYTVDARLHAVFEQS-ESGKS 63
Query: 65 FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLG 124
FDYSQS+R+ SVPE+QI+AYLSKIQRGGHIQPFGCTIAVDE+TF VIAYSENA ++L
Sbjct: 64 FDYSQSMRSTKDSVPEKQITAYLSKIQRGGHIQPFGCTIAVDESTFAVIAYSENARDLLD 123
Query: 125 LAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFY 184
+ PQSVP ++ +EILT+GTD RTLF+ SSS LLE+AFGAREITLLNPIWIHSK +GKPFY
Sbjct: 124 MMPQSVPVMQSREILTVGTDFRTLFSPSSSTLLEQAFGAREITLLNPIWIHSKISGKPFY 183
Query: 185 AILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVE 244
AILHR+DVG+VIDLEPAR+EDPALSIAGAVQSQKLAVRAIS+LQSLPGGDIKLLCDTVVE
Sbjct: 184 AILHRIDVGVVIDLEPARSEDPALSIAGAVQSQKLAVRAISKLQSLPGGDIKLLCDTVVE 243
Query: 245 SVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVR 304
SVR+LTGYDRVMVY+FHEDEHGEV+AESKR DLEPY GLHYPATDIPQASRFLFKQNRVR
Sbjct: 244 SVRELTGYDRVMVYKFHEDEHGEVLAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVR 303
Query: 305 MIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE 364
MIVDCHATP+ VIQDEGLMQPLCLVGSTLRAPHGCH+QYMANMGSIASLALAVIINGND+
Sbjct: 304 MIVDCHATPVQVIQDEGLMQPLCLVGSTLRAPHGCHSQYMANMGSIASLALAVIINGNDD 363
Query: 365 EAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVL 398
EA+GGRS+ RLW AFGLQLNMELQLA+QL EKHVL
Sbjct: 364 EAIGGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQLLEKHVL 423
Query: 399 RTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEW 458
RTQTLLCDMLLRD+P GIVTQSPSIM+LVKCDGAALYYQ KYYP+GVTPTE QIKDIVEW
Sbjct: 424 RTQTLLCDMLLRDTPTGIVTQSPSIMNLVKCDGAALYYQDKYYPVGVTPTEAQIKDIVEW 483
Query: 459 LLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGG 518
LL+ HG STGLSTDSL DAGYP AA+LGDAVCGMA AYITKRDFLFWFRSHTAKE+KWGG
Sbjct: 484 LLSSHGTSTGLSTDSLGDAGYPGAASLGDAVCGMAAAYITKRDFLFWFRSHTAKEVKWGG 543
Query: 519 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN 578
AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQ+ILRDSF+DAE +N
Sbjct: 544 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQIILRDSFKDAETNN 603
Query: 579 SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGL 638
KAV Q DLE+QG+DELSSVAREMVRLIETATAPIFAVDV+GC+NGWNAK+AELTGL
Sbjct: 604 LKAVTENQHGDLEIQGIDELSSVAREMVRLIETATAPIFAVDVNGCINGWNAKIAELTGL 663
Query: 639 SVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
+VEEA GKSLVHDLVYKE EEIVD LL HAL+GEEDKNVEIKLRTFG E+ K VFVVVN
Sbjct: 664 AVEEATGKSLVHDLVYKESEEIVDKLLIHALRGEEDKNVEIKLRTFGPEHDNKPVFVVVN 723
Query: 699 ACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTC 758
ACSSKDYTNNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFASD+NTC
Sbjct: 724 ACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTC 783
Query: 759 CSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
CSEWN AMEKLTGWSRGD+IGKMLVGE+FGSCCRLKGPDA+TKFMI LHNA GG DT+KF
Sbjct: 784 CSEWNNAMEKLTGWSRGDMIGKMLVGEIFGSCCRLKGPDAITKFMIVLHNAIGGSDTDKF 843
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
PF FDRNGKYVQALLTAN+RVN++GQ++GAFCFLQI SPELQQAL VQRQQEK+CFAR+
Sbjct: 844 PFSFFDRNGKYVQALLTANRRVNVDGQVIGAFCFLQIPSPELQQALRVQRQQEKQCFARM 903
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
KELAY+CQEIK+PLSG+ FTNSLL T+L+EDQKQ LETSAACEKQ+LKIIKDVDL SIE
Sbjct: 904 KELAYMCQEIKSPLSGIRFTNSLLGGTELSEDQKQFLETSAACEKQILKIIKDVDLASIE 963
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
DGSLE EK +FLLGSVINAVVSQVM+LLRERNLQLIRDIPEE+KTLAVYGDQ RIQQVLA
Sbjct: 964 DGSLELEKEDFLLGSVINAVVSQVMLLLRERNLQLIRDIPEEVKTLAVYGDQVRIQQVLA 1023
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSS 1058
DFLLNMVRY+PS EGWVEIHVRP L S+G ++VH EFR+VCPGEGLPP+LVQDMFHSS
Sbjct: 1024 DFLLNMVRYAPSDEGWVEIHVRPILTTISDGHSMVHTEFRLVCPGEGLPPQLVQDMFHSS 1083
Query: 1059 RWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPR 1103
+W+TQEGLGLSMCRKILKLM G+VQYIRESERCYFL+I ELPMPR
Sbjct: 1084 QWLTQEGLGLSMCRKILKLMGGDVQYIRESERCYFLVILELPMPR 1128
>gi|59798480|sp|Q9ZS62.1|PHYB1_SOLLC RecName: Full=Phytochrome B1
gi|4038600|emb|CAA05293.1| phytochrome B1 [Solanum lycopersicum]
Length = 1131
Score = 1944 bits (5036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 933/1137 (82%), Positives = 1020/1137 (89%), Gaps = 35/1137 (3%)
Query: 1 MASNSQHQQQ-HRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSG 59
MAS S+ + H SQ AQSSGTSN+ N +S +SKAIAQYT DARLHAVFEQSG
Sbjct: 1 MASGSRTKHSYHNSSQGQAQSSGTSNM----NYKDS--ISKAIAQYTADARLHAVFEQSG 54
Query: 60 ESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENA 119
ESGKSFDYSQSV+T + SVPE+QI+AYL+KIQRGGHIQPFGC IAVDEA+FR+IAYSENA
Sbjct: 55 ESGKSFDYSQSVKTTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENA 114
Query: 120 GEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNT 179
EML L PQSVP+L+K EILT+GTDVRTLFT SSSVLLE+AFGAREITLLNPIWIHSKN+
Sbjct: 115 CEMLSLTPQSVPSLDKSEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNS 174
Query: 180 GKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC 239
GKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLC
Sbjct: 175 GKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLC 234
Query: 240 DTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFK 299
DTVVESVR+LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFK
Sbjct: 235 DTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFK 294
Query: 300 QNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVII 359
QNRVRMIVDCHATP+ V QDE LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL LAVII
Sbjct: 295 QNRVRMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVII 354
Query: 360 NGNDEEAVGG-RSTTRLW--------------------------AFGLQLNMELQLASQL 392
NGNDEEAVGG R++ RLW AFGLQLNMELQLASQL
Sbjct: 355 NGNDEEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQL 414
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEKHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQ KYYPLGVTPTE QI
Sbjct: 415 SEKHVLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQI 474
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KDIVEWLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMAVAYIT +DFLFWFRSHTAK
Sbjct: 475 KDIVEWLLAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAK 534
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+NAEMDAIHSLQLILRDSF+
Sbjct: 535 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFK 594
Query: 573 DAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
DAEASNSKA+V+A L ++ELQG+DELSSVAREMVRLIETATAPIF VDV+G +NGWN KV
Sbjct: 595 DAEASNSKAIVHA-LGEMELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKV 653
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
ELTGLS EEA GKSLVHDL+YKE +E + LL++AL+G E KNVEIKLRTFGAE +KA
Sbjct: 654 VELTGLSAEEAKGKSLVHDLLYKESQESAEKLLYNALRGVEGKNVEIKLRTFGAEQVEKA 713
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
VF+VVNACSS+DYTN+IVGV FVGQDVT +K+VMDKFIHIQGDYKAIVHSPNPLIPPIFA
Sbjct: 714 VFLVVNACSSRDYTNSIVGVSFVGQDVTGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFA 773
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGG 812
SDENT CSEWNTAMEKL+GWSR +I+GKMLVGE+FGSCCRLKGPDA+TKFMI LHNA GG
Sbjct: 774 SDENTSCSEWNTAMEKLSGWSREEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGG 833
Query: 813 QDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEK 872
QDT+KFPF FDRNGKYVQALLTANKRVNMEG +GAFCF+QIASPELQQAL VQRQQEK
Sbjct: 834 QDTDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEK 893
Query: 873 KCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDV 932
KC++++KELAYICQE+K+PL+G+ FTNSLLEAT+LTE QKQ LETSAACE+QM KII+DV
Sbjct: 894 KCYSQMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDV 953
Query: 933 DLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQAR 992
DLE+IEDGSL EK +F LGSVI+AVVSQVM+LLRE+ +QLIRDIPEEIKTL V+GDQ R
Sbjct: 954 DLENIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVR 1013
Query: 993 IQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQ 1052
IQQVLADFLLNMVRY+PS +GWVEI +RP++ S+G T+VH E R++CPGEGLPPELVQ
Sbjct: 1014 IQQVLADFLLNMVRYAPSPDGWVEIQLRPSMMPISDGATVVHIELRIICPGEGLPPELVQ 1073
Query: 1053 DMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSKSI 1109
DMFHSSRW+TQEGLGLSMCRK+LKLMNGE+QYIRESERCYF+II +LPM R+G KS+
Sbjct: 1074 DMFHSSRWVTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFMIILDLPMTRKGPKSV 1130
>gi|258677127|gb|ACV87354.1| phytochrome B [Aquilegia formosa]
Length = 1132
Score = 1902 bits (4926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 904/1095 (82%), Positives = 986/1095 (90%), Gaps = 27/1095 (2%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR-TMSHSVPEQQISAYLSKIQRGGH 95
+V+KAIAQ+TVDARLHAVFEQSGESGK FDYSQS+R T S S+PEQQI+AYLS+IQRGGH
Sbjct: 32 SVNKAIAQFTVDARLHAVFEQSGESGKPFDYSQSIRSTTSQSIPEQQITAYLSRIQRGGH 91
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC I+VDE++FRVIA+SENA EML L PQSVP L+K ++L +GTDVRTLFT SS
Sbjct: 92 IQPFGCMISVDESSFRVIAFSENATEMLDLTPQSVPTLDKPQLLDVGTDVRTLFTQSSVG 151
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LLEKAF AREITLLNP+WIHSKN+GKPFYAILH++DVGIVIDLEPARTEDPALSIAGAVQ
Sbjct: 152 LLEKAFSAREITLLNPVWIHSKNSGKPFYAILHKIDVGIVIDLEPARTEDPALSIAGAVQ 211
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQK+AVRAIS+LQSLPGGDI +LCDTVVE+VR LTGYDRVMVY+FH+DEHGEVVAESKR
Sbjct: 212 SQKIAVRAISRLQSLPGGDINILCDTVVENVRDLTGYDRVMVYKFHDDEHGEVVAESKRS 271
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEP+ GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+ VIQDE LMQPLCLVGSTLRA
Sbjct: 272 DLEPFIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVHVIQDEALMQPLCLVGSTLRA 331
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASLALAV+INGNDEE GR+ +LW
Sbjct: 332 PHGCHAQYMANMGSIASLALAVVINGNDEEGTSGRNPMKLWGLVVCHHTSARCIPFPLRH 391
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKC
Sbjct: 392 ACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKC 451
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DG+ALYY+GK+YP+GVTPTE Q+KDIV+WL YHGDSTG+STDSLADAGYP AA+LGDAV
Sbjct: 452 DGSALYYKGKFYPIGVTPTEAQMKDIVDWLWAYHGDSTGVSTDSLADAGYPGAASLGDAV 511
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
GMAVAYIT RDFLFWFRS+TAKEIKWGGAKHHPEDKDDG RMHPRSSFKAFLEVVKSRS
Sbjct: 512 RGMAVAYITSRDFLFWFRSNTAKEIKWGGAKHHPEDKDDGHRMHPRSSFKAFLEVVKSRS 571
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+NAEMDAIHSLQLILRDSFRDAE SNSK ++ + DLELQGVDELSSVAREMVRLI
Sbjct: 572 LPWENAEMDAIHSLQLILRDSFRDAEGSNSKPLITSPPGDLELQGVDELSSVAREMVRLI 631
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPIFAVD G +NGWNAK+AELTGLSV EAMGKSLVHDLV+KE E+VDNLL HA
Sbjct: 632 ETATAPIFAVDSDGRINGWNAKIAELTGLSVGEAMGKSLVHDLVFKESVEVVDNLLKHAF 691
Query: 670 KGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKF 729
+G+EDKNVEIKLR F ++A+FVVVNA SS+DYTNNIVGVCFVGQDVT QK+VMDKF
Sbjct: 692 RGQEDKNVEIKLRKFIPRKPEEAIFVVVNARSSRDYTNNIVGVCFVGQDVTSQKVVMDKF 751
Query: 730 IHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS 789
IHIQGDYKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGW RG+I+GKMLVGEVFG
Sbjct: 752 IHIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWDRGEIMGKMLVGEVFGG 811
Query: 790 CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGA 849
CCRLKGPD+LTKFMI LH+A GGQDT+KFPF F+R+GKYVQALLTANKR N+EGQI+GA
Sbjct: 812 CCRLKGPDSLTKFMIVLHSAIGGQDTDKFPFAFFNRDGKYVQALLTANKRANLEGQIIGA 871
Query: 850 FCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTE 909
FCFLQIASPELQ AL +QRQQEKKCFAR+KELAYICQEIKNPLSG+ FTN+LLEATDLTE
Sbjct: 872 FCFLQIASPELQHALEIQRQQEKKCFARVKELAYICQEIKNPLSGIRFTNTLLEATDLTE 931
Query: 910 DQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRER 969
DQKQ LETSAACE+QM+KIIKDVDL++IEDGSLE E+ +FLLGSVINAVVSQVM+LLRER
Sbjct: 932 DQKQFLETSAACERQMMKIIKDVDLQNIEDGSLELERCDFLLGSVINAVVSQVMILLRER 991
Query: 970 NLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEG 1029
LQLIRDIPEEIKTLAV DQ RIQQVLADFLLNMVRY+P +GWVEI VRP LKQSS+G
Sbjct: 992 GLQLIRDIPEEIKTLAVSSDQVRIQQVLADFLLNMVRYAPMPDGWVEIQVRPNLKQSSDG 1051
Query: 1030 QTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESE 1089
+VH EFRMVCPGEGLPPELVQDMFHSSRW TQEGLGLSMCRKILKLMNGEVQYIRESE
Sbjct: 1052 IELVHLEFRMVCPGEGLPPELVQDMFHSSRWATQEGLGLSMCRKILKLMNGEVQYIRESE 1111
Query: 1090 RCYFLIIFELPMPRR 1104
RC+F+II ELP P+R
Sbjct: 1112 RCFFIIILELPTPQR 1126
>gi|358248221|ref|NP_001240097.1| phytochrome B-like [Glycine max]
gi|312231793|gb|ACE79198.2| phytochrome B-1 [Glycine max]
Length = 1137
Score = 1878 bits (4865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 890/1099 (80%), Positives = 979/1099 (89%), Gaps = 28/1099 (2%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
++SKAIAQYT DARLHAVFEQSGESG+SF+YS+S+R S SVPEQQI+AYL KIQRGG I
Sbjct: 37 SMSKAIAQYTEDARLHAVFEQSGESGRSFNYSESIRIASESVPEQQITAYLVKIQRGGFI 96
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE--ILTIGTDVRTLFTSSSS 154
QPFG IAVDE +FR++ YS+NA +MLG+ PQSVP+L+ + +GTDVR LFT SS+
Sbjct: 97 QPFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGTDVRALFTHSSA 156
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
+LLEKAF AREI+L+NPIWIHS+ +GKPFY ILHR+DVGIVIDLEPARTEDPALSIAGAV
Sbjct: 157 LLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAV 216
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAISQLQSLPGGD+KLLCDTVVESVR+LTGYDRVMVY+FHEDEHGEVV+ESKR
Sbjct: 217 QSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKR 276
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
PDLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+ + V+QDE L+QPLCLVGSTLR
Sbjct: 277 PDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLR 336
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGSIASL +AVIINGNDEE VGGRS+ RLW
Sbjct: 337 APHGCHAQYMANMGSIASLVMAVIINGNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPLR 396
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA+Q EK VLRTQTLLCDMLLRDSP GIVTQSPSIMDLVK
Sbjct: 397 YACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVK 456
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAALY+QG YYPLGVTPTE QI+DI+EWLL +HGDSTGLSTDSL DAGYP AA+LGDA
Sbjct: 457 CDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGAASLGDA 516
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR
Sbjct: 517 VCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 576
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
SLPW+NAEMDAIHSLQLILRDSF+DAE NSKAVV+ + + ELQGVDELSSVAREMVRL
Sbjct: 577 SLPWENAEMDAIHSLQLILRDSFKDAEHRNSKAVVDPHVSEQELQGVDELSSVAREMVRL 636
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPIFAVDV G VNGWNAKV+ELTGL VEEAMGKSLVHDLV+KE EE ++ LL A
Sbjct: 637 IETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETMNKLLSRA 696
Query: 669 LKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDK 728
LKGEEDKNVEIK+RTFG E++ KAVF+VVNACSSKD+TNN+VGVCFVGQDVT QK+VMDK
Sbjct: 697 LKGEEDKNVEIKMRTFGPEHQNKAVFLVVNACSSKDFTNNVVGVCFVGQDVTGQKIVMDK 756
Query: 729 FIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG 788
FI+IQGDYKAIVHSPNPLIPPIFASD+NTCC EWNTAMEKLTGW R D+IGKMLVGEVFG
Sbjct: 757 FINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRVDVIGKMLVGEVFG 816
Query: 789 SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVG 848
SCC+LKG D++TKFMI LHNA GGQDT+KFPF DR+GKYVQ LTANKRVNMEGQI+G
Sbjct: 817 SCCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVNMEGQIIG 876
Query: 849 AFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLT 908
AFCFLQI SPELQQAL QRQQEK F R+KELAYICQ +KNPLSG+ FTNSLLEAT LT
Sbjct: 877 AFCFLQIMSPELQQALKAQRQQEKNSFGRMKELAYICQGVKNPLSGIRFTNSLLEATSLT 936
Query: 909 EDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRE 968
+QKQ LETS ACEKQMLKII+DVDLESIEDGSLE EK EFLLG+VINAVVSQVM+LLRE
Sbjct: 937 NEQKQFLETSVACEKQMLKIIRDVDLESIEDGSLELEKGEFLLGNVINAVVSQVMLLLRE 996
Query: 969 RNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSE 1028
RNLQLIRDIPEEIKTLAVYGDQ RIQQVL+DFLLN+VRY+PS +GWVEIHVRP +KQ S+
Sbjct: 997 RNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDGWVEIHVRPRIKQISD 1056
Query: 1029 GQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRES 1088
G T++H EFRMVCPGEGLPPEL+QDMF++SRW TQEGLGLSM RKILKLMNGEVQYIRE+
Sbjct: 1057 GLTLLHAEFRMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQYIREA 1116
Query: 1089 ERCYFLIIFELPMPRRGSK 1107
ERCYF ++ ELP+ RR SK
Sbjct: 1117 ERCYFYVLLELPVTRRSSK 1135
>gi|312231795|gb|ACE79199.2| phytochrome B-2 [Glycine max]
Length = 1149
Score = 1877 bits (4862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 890/1099 (80%), Positives = 980/1099 (89%), Gaps = 28/1099 (2%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+ SKAIAQYT DARLHAVFEQSGESG+SFDYSQS+R S SVPEQQI+AYL KIQRGG I
Sbjct: 49 STSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTSESVPEQQITAYLLKIQRGGFI 108
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE--ILTIGTDVRTLFTSSSS 154
QPFG IAVDE +FR++AYS+NA +MLG+ PQSVP+L+ + +GTD+RTLFT SS+
Sbjct: 109 QPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSA 168
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
VLLEKAF AREI+L+NPIWIHS+ +GKPFY ILHR+DVGIVIDLEPARTEDPALSIAGAV
Sbjct: 169 VLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAV 228
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAISQLQSLPGGD+KLLCDTVVESVR+LTGYDRVMVYRFHEDEHGEVVAE+KR
Sbjct: 229 QSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKR 288
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
PDLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+ + V+QDE L+QPLCLVGSTLR
Sbjct: 289 PDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLR 348
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGS ASL +AVIINGNDEE VGGR++ RLW
Sbjct: 349 APHGCHAQYMANMGSTASLVMAVIINGNDEEGVGGRTSMRLWGLVICHHTSARCIPFPLR 408
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA+Q EK VLRTQTLLCDMLLRDSP GIVTQSPSIMDLVK
Sbjct: 409 YACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVK 468
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAALYYQG YYPLGVTPTE QI+DI+EWLL +H DSTGLSTDSLADAGYP AA+LGDA
Sbjct: 469 CDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDA 528
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR
Sbjct: 529 VCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 588
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
SLPW+NAEMDAIHSLQLILRDSF+DAE SNSKAV++ ++ +LELQGVDELSSVAREMVRL
Sbjct: 589 SLPWENAEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMVRL 648
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPIFAVDV G +NGWNAKV+ELTGL VEEAMGKSLV DLV+KE EE VD LL A
Sbjct: 649 IETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRA 708
Query: 669 LKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDK 728
LKGEEDKNVEIK+RTFG E++ KAVFVVVNACSSKDYTNN+VGVCFVGQDVT QK+VMDK
Sbjct: 709 LKGEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDK 768
Query: 729 FIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG 788
FI+IQGDYKAIVH+PNPLIPPIFASD+NTCC EWNTAMEKLTGWSR D+IGKMLVGEVFG
Sbjct: 769 FINIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVFG 828
Query: 789 SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVG 848
SCC+LKG D++TKFMI LHNA GG DT++FPF DR GK+VQA LTANKRVNM+GQI+G
Sbjct: 829 SCCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQIIG 888
Query: 849 AFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLT 908
AFCFLQI SPELQQAL QRQQEK FAR+KELAYICQ +KNPLSG+ FTNSLLEAT L+
Sbjct: 889 AFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCLS 948
Query: 909 EDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRE 968
+QKQ LETSAACEKQMLKII DVD+ESIEDGSLE EK EFLLG+VINAVVSQVM+LLRE
Sbjct: 949 NEQKQFLETSAACEKQMLKIIHDVDIESIEDGSLELEKGEFLLGNVINAVVSQVMLLLRE 1008
Query: 969 RNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSE 1028
RNLQLIRDIPEEIKTLAVYGDQ RIQQVL+DFLLN+VRY+PS +GWVEIHV P +KQ S+
Sbjct: 1009 RNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDGWVEIHVHPRIKQISD 1068
Query: 1029 GQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRES 1088
G T++H EFRMVCPGEGLPPEL+Q+MF++S W TQEGLGLSM RKILKLMNGEVQYIRE+
Sbjct: 1069 GLTLLHAEFRMVCPGEGLPPELIQNMFNNSGWGTQEGLGLSMSRKILKLMNGEVQYIREA 1128
Query: 1089 ERCYFLIIFELPMPRRGSK 1107
+RCYF ++ ELP+ RR SK
Sbjct: 1129 QRCYFYVLLELPVTRRSSK 1147
>gi|356555997|ref|XP_003546314.1| PREDICTED: phytochrome B-like isoform 1 [Glycine max]
Length = 1149
Score = 1877 bits (4862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 890/1099 (80%), Positives = 980/1099 (89%), Gaps = 28/1099 (2%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+ SKAIAQYT DARLHAVFEQSGESG+SFDYSQS+R S SVPEQQI+AYL KIQRGG I
Sbjct: 49 STSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTSESVPEQQITAYLLKIQRGGFI 108
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE--ILTIGTDVRTLFTSSSS 154
QPFG IAVDE +FR++AYS+NA +MLG+ PQSVP+L+ + +GTD+RTLFT SS+
Sbjct: 109 QPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSA 168
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
VLLEKAF AREI+L+NPIWIHS+ +GKPFY ILHR+DVGIVIDLEPARTEDPALSIAGAV
Sbjct: 169 VLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAV 228
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAISQLQSLPGGD+KLLCDTVVESVR+LTGYDRVMVYRFHEDEHGEVVAE+KR
Sbjct: 229 QSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKR 288
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
PDLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+ + V+QDE L+QPLCLVGSTLR
Sbjct: 289 PDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLR 348
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGS ASL +AVIINGNDEE VGGR++ RLW
Sbjct: 349 APHGCHAQYMANMGSTASLVMAVIINGNDEEGVGGRTSMRLWGLVVCHHTSARCIPFPLR 408
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA+Q EK VLRTQTLLCDMLLRDSP GIVTQSPSIMDLVK
Sbjct: 409 YACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVK 468
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAALYYQG YYPLGVTPTE QI+DI+EWLL +H DSTGLSTDSLADAGYP AA+LGDA
Sbjct: 469 CDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDA 528
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR
Sbjct: 529 VCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 588
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
SLPW+NAEMDAIHSLQLILRDSF+DAE SNSKAV++ ++ +LELQGVDELSSVAREMVRL
Sbjct: 589 SLPWENAEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMVRL 648
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPIFAVDV G +NGWNAKV+ELTGL VEEAMGKSLV DLV+KE EE VD LL A
Sbjct: 649 IETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRA 708
Query: 669 LKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDK 728
LKGEEDKNVEIK+RTFG E++ KAVFVVVNACSSKDYTNN+VGVCFVGQDVT QK+VMDK
Sbjct: 709 LKGEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDK 768
Query: 729 FIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG 788
FI+IQGDYKAIVH+PNPLIPPIFASD+NTCC EWNTAMEKLTGWSR D+IGKMLVGEVFG
Sbjct: 769 FINIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVFG 828
Query: 789 SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVG 848
SCC+LKG D++TKFMI LHNA GG DT++FPF DR GK+VQA LTANKRVNM+GQI+G
Sbjct: 829 SCCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQIIG 888
Query: 849 AFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLT 908
AFCFLQI SPELQQAL QRQQEK FAR+KELAYICQ +KNPLSG+ FTNSLLEAT L+
Sbjct: 889 AFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCLS 948
Query: 909 EDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRE 968
+QKQ LETSAACEKQMLKII DVD+ESIEDGSLE EK EFLLG+VINAVVSQVM+LLRE
Sbjct: 949 NEQKQFLETSAACEKQMLKIIHDVDIESIEDGSLELEKGEFLLGNVINAVVSQVMLLLRE 1008
Query: 969 RNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSE 1028
RNLQLIRDIPEEIKTLAVYGDQ RIQQVL+DFLLN+VRY+PS +GWVEIHV P +KQ S+
Sbjct: 1009 RNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDGWVEIHVHPRIKQISD 1068
Query: 1029 GQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRES 1088
G T++H EFRMVCPGEGLPPEL+Q+MF++S W TQEGLGLSM RKILKLMNGEVQYIRE+
Sbjct: 1069 GLTLLHAEFRMVCPGEGLPPELIQNMFNNSGWGTQEGLGLSMSRKILKLMNGEVQYIREA 1128
Query: 1089 ERCYFLIIFELPMPRRGSK 1107
+RCYF ++ ELP+ RR SK
Sbjct: 1129 QRCYFYVLLELPVTRRSSK 1147
>gi|190586167|gb|ACE79200.1| phytochrome B-3 [Glycine max]
Length = 1100
Score = 1875 bits (4858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 889/1098 (80%), Positives = 977/1098 (88%), Gaps = 28/1098 (2%)
Query: 38 VSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQ 97
+SKAIAQYT DARLHAVFEQSGESG+SF+YS+S+R S SVPEQQI+AYL KIQRGG IQ
Sbjct: 1 MSKAIAQYTEDARLHAVFEQSGESGRSFNYSESIRIASESVPEQQITAYLVKIQRGGFIQ 60
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE--ILTIGTDVRTLFTSSSSV 155
PFG IAVDE +FR++ YS+NA +MLG+ PQSVP+L+ + +GTDVR LFT SS++
Sbjct: 61 PFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGTDVRALFTHSSAL 120
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LLEKAF AREI+L+NPIWIHS+ +GKPFY ILHR+DVGIVIDLEPARTEDPALSIAGAVQ
Sbjct: 121 LLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQ 180
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAISQLQSLPGGD+KLLCDTVVESVR+LTGYDRVMVY+FHEDEHGEVV+ESKRP
Sbjct: 181 SQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKRP 240
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+ + V+QDE L+QPLCLVGSTLRA
Sbjct: 241 DLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRA 300
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL +AVIINGNDEE VGGRS+ RLW
Sbjct: 301 PHGCHAQYMANMGSIASLVMAVIINGNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPLRY 360
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNMELQLA+Q EK VLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKC
Sbjct: 361 ACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKC 420
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALY+QG YYPLGVTPTE QI+DI+EWLL +HGDSTGLSTDSL DAGYP AA+LGDAV
Sbjct: 421 DGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGAASLGDAV 480
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS
Sbjct: 481 CGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 540
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+NAEMDAIHSLQLILRDSF+DAE NSKAV + ++ + ELQGVDELSSVAREMVRLI
Sbjct: 541 LPWENAEMDAIHSLQLILRDSFKDAEHRNSKAVADPRVSEQELQGVDELSSVAREMVRLI 600
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPIFAVDV G VNGWNAKV+ELTGL VEEAMGKSLVHDLV+KE EE ++ LL AL
Sbjct: 601 ETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETMNKLLSRAL 660
Query: 670 KGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKF 729
KGEEDKNVEIK+RTFG E + KAVF+VVNACSSKD+TNN+VGVCFVGQDVT QK+VMDKF
Sbjct: 661 KGEEDKNVEIKMRTFGPERQNKAVFLVVNACSSKDFTNNVVGVCFVGQDVTGQKIVMDKF 720
Query: 730 IHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS 789
I+IQGDYKAIVHSPNPLIPPIFASD+NTCC EWNTAMEKLTGW R D+IGKMLVGEVFGS
Sbjct: 721 INIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRVDVIGKMLVGEVFGS 780
Query: 790 CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGA 849
CC+LKG D++TKFMI LHNA GGQDT+KFPF DR+GKYVQ LTANKRVNMEGQI+GA
Sbjct: 781 CCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVNMEGQIIGA 840
Query: 850 FCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTE 909
FCFLQI SPELQQAL QRQQEK F R+KELAYICQ +KNPLSG+ FTNSLLEAT LT
Sbjct: 841 FCFLQIMSPELQQALKAQRQQEKNSFGRMKELAYICQGVKNPLSGIRFTNSLLEATSLTN 900
Query: 910 DQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRER 969
+QKQ LETS ACEKQMLKII+DVDLESIEDGSLE EK EFLLG+VINAVVSQVM+LLRER
Sbjct: 901 EQKQFLETSVACEKQMLKIIRDVDLESIEDGSLELEKGEFLLGNVINAVVSQVMLLLRER 960
Query: 970 NLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEG 1029
NLQLIRDIPEEIKTLAVYGDQ RIQQVL+DFLLN+VRY+PS +GWVEIHVRP +KQ S+G
Sbjct: 961 NLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDGWVEIHVRPRIKQISDG 1020
Query: 1030 QTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESE 1089
T++H EFRMVCPGEGLPPEL+QDMF++SRW TQEGLGLSM RKILKLMNGEVQYIRE+E
Sbjct: 1021 LTLLHAEFRMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQYIREAE 1080
Query: 1090 RCYFLIIFELPMPRRGSK 1107
RCYF ++ ELP+ RR SK
Sbjct: 1081 RCYFYVLLELPVTRRSSK 1098
>gi|224108734|ref|XP_002314949.1| phytochrome B2 [Populus trichocarpa]
gi|10954093|gb|AAG25726.1|AF309807_1 phytochrome B2 [Populus trichocarpa]
gi|222863989|gb|EEF01120.1| phytochrome B2 [Populus trichocarpa]
Length = 1146
Score = 1862 bits (4824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 918/1154 (79%), Positives = 1000/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + AQSSGTSN+R HH+ATES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPVHNQAQSSGTSNMRQHHHATES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+G+SFDYS+SVRT + SVPEQQI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDE LMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTETQIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTETQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQD+T QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDITGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNMEG I+GAFCFLQIASPELQQ L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQQTLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EF+ + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFKYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
+ + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 LRSFLNFKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSYPENTTVTLYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + RR S+SIT
Sbjct: 1131 WFLLLYRRQSRSIT 1144
>gi|78643912|emb|CAJ21319.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1859 bits (4815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 896/1066 (84%), Positives = 968/1066 (90%), Gaps = 29/1066 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV 1040
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR +
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYL 1063
>gi|78643900|emb|CAJ21313.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1858 bits (4814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 917/1154 (79%), Positives = 1000/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643894|emb|CAJ21310.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1858 bits (4814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 897/1064 (84%), Positives = 966/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643916|emb|CAJ21321.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1857 bits (4811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 896/1066 (84%), Positives = 967/1066 (90%), Gaps = 29/1066 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV 1040
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR +
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYL 1063
>gi|78643918|emb|CAJ21322.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1857 bits (4811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 897/1064 (84%), Positives = 966/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643914|emb|CAJ21320.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1857 bits (4809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 894/1064 (84%), Positives = 966/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFG+CCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGNCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCF +IASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFFRIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EF+
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFK 1061
>gi|78643856|emb|CAJ21291.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1856 bits (4807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 895/1064 (84%), Positives = 966/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FR+IAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRLIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643858|emb|CAJ21292.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1856 bits (4807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 896/1064 (84%), Positives = 966/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSK++G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKDSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHA YM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643884|emb|CAJ21305.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1856 bits (4807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 896/1064 (84%), Positives = 966/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFG+CCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGNCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643906|emb|CAJ21316.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1856 bits (4807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 915/1154 (79%), Positives = 1000/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643898|emb|CAJ21312.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1855 bits (4806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 896/1064 (84%), Positives = 966/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643908|emb|CAJ21317.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1855 bits (4806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 895/1066 (83%), Positives = 966/1066 (90%), Gaps = 29/1066 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFK
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKH 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV 1040
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR +
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYL 1063
>gi|78643920|emb|CAJ21323.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1855 bits (4804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 916/1154 (79%), Positives = 1000/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDS GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++R E Y L I
Sbjct: 1078 PRSFLNCKLTLVKLHREGMVPKIQFQGLSVCQ-------GRLIWLRFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643938|emb|CAJ21332.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1855 bits (4804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 915/1154 (79%), Positives = 999/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K F FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLTFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVKLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643910|emb|CAJ21318.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1855 bits (4804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 895/1064 (84%), Positives = 965/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHA YM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643892|emb|CAJ21309.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1855 bits (4804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 896/1064 (84%), Positives = 965/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTED ALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|121309520|dbj|BAF44083.1| phytochrome b [Lotus japonicus]
Length = 1143
Score = 1854 bits (4802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 881/1108 (79%), Positives = 983/1108 (88%), Gaps = 34/1108 (3%)
Query: 34 ESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRG 93
ES+ + KAIAQYT DARLHAV+EQSGES FDYS S+R SVPEQQI+AYL++IQRG
Sbjct: 39 ESVMMRKAIAQYTEDARLHAVYEQSGES---FDYSHSLRVTVESVPEQQITAYLARIQRG 95
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEI---LTIGTDVRTLFT 150
G+IQPFGC IAVD+ +FR++AYS+NA +MLG+ PQSVP+++ +GTDVR+LF+
Sbjct: 96 GYIQPFGCMIAVDDPSFRLLAYSDNARDMLGITPQSVPSIDDDSSSSSFALGTDVRSLFS 155
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSI 210
SS+VLL+KAF AREI+L+NP+WIHS+ +G+PFY ILHRVDVG+VIDLEPAR++DPALSI
Sbjct: 156 PSSAVLLDKAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDLEPARSDDPALSI 215
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
AGAVQSQKLAVRAISQLQSLPGGD+KLLCD VV+SVR+LTGYDRVMVY+FHEDEHGEVVA
Sbjct: 216 AGAVQSQKLAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVA 275
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
ESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+P+ V+QDE LMQPLCLVG
Sbjct: 276 ESKRADLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQDEALMQPLCLVG 335
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW------------ 376
STLRAPHGCHAQYMANMGSIASL +AVIINGND++AVG GRS+ RLW
Sbjct: 336 STLRAPHGCHAQYMANMGSIASLVMAVIINGNDDDAVGVGGRSSMRLWGLVVCHHTSARC 395
Query: 377 --------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
AFGLQLNMELQ+A+Q EK VLRTQTLLCDMLLRDSPAGIVTQSPS
Sbjct: 396 IPFPLRYACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSPS 455
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAALY QG YYPLGVTP+E+QI+DI++WLL +HGDSTGLSTDSLADAGYP A
Sbjct: 456 IMDLVKCDGAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHGDSTGLSTDSLADAGYPGA 515
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
++LGDAVCGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL
Sbjct: 516 SSLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 575
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVA 602
EVVKSRS PWDNAEMDAIHSLQLILRDSF++ E S+SKAVVN L +LELQGVDELSSVA
Sbjct: 576 EVVKSRSSPWDNAEMDAIHSLQLILRDSFKEDEHSDSKAVVNTHLAELELQGVDELSSVA 635
Query: 603 REMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVD 662
REMVRLIETATAPIFAVDV G +NGWNAKV+ELTGL VEEAMGKSLV DLVYKE EE VD
Sbjct: 636 REMVRLIETATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMGKSLVRDLVYKESEETVD 695
Query: 663 NLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQ 722
LL ALKGEEDKNVEIKLRTFG E++ KAV+VVVNACSSKDYTNNIVGVCFVGQDVT Q
Sbjct: 696 RLLSRALKGEEDKNVEIKLRTFGPEHQDKAVYVVVNACSSKDYTNNIVGVCFVGQDVTGQ 755
Query: 723 KLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKML 782
K+VMDKFI+IQGDYKAIVHSPNPLIPPIFASD+NTCC EWN AMEKLTGW R D+IGK+L
Sbjct: 756 KVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLTGWGRADVIGKLL 815
Query: 783 VGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
VGEVFGSCC+LKG DA+TKFMI LHNA GGQDT+KFPF DR+GKYVQ LTANKRV++
Sbjct: 816 VGEVFGSCCQLKGSDAITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVSI 875
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
+GQI+GAFCFLQI SPELQQAL VQ+QQEK CFAR+KELAYICQE+KNPLSG+ FTNSLL
Sbjct: 876 DGQIIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLL 935
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
EAT LT++QKQ LETSAACEKQMLKII+DVDLESIEDGSLE E+ EFLLG+VINAVVSQV
Sbjct: 936 EATGLTDEQKQFLETSAACEKQMLKIIRDVDLESIEDGSLELERGEFLLGNVINAVVSQV 995
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
M+LLRERNLQLIRDIPEEIKTLAVYGDQ RIQQVLADFL N+VRY+PS +GWVEIHV P
Sbjct: 996 MVLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEIHVYPK 1055
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+KQ S+G T++H EFR+VCPGEGLP ELVQDMFH+SRW+TQEGLGL M RKILKLMNGEV
Sbjct: 1056 IKQISDGLTLLHAEFRLVCPGEGLPSELVQDMFHNSRWVTQEGLGLCMSRKILKLMNGEV 1115
Query: 1083 QYIRESERCYFLIIFELPMPRRGSKSIT 1110
QYIRE+ERCYF ++ ELP+ RR SK +
Sbjct: 1116 QYIREAERCYFFVLLELPVTRRSSKGVN 1143
>gi|78643902|emb|CAJ21314.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1853 bits (4801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 915/1154 (79%), Positives = 999/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIAS ELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASLELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643878|emb|CAJ21302.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1853 bits (4800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 894/1064 (84%), Positives = 966/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCC+LKGP++LTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPNSLTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|255642594|gb|ACU21557.1| phytochrome B [Medicago sativa]
Length = 1141
Score = 1853 bits (4799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 885/1144 (77%), Positives = 995/1144 (86%), Gaps = 43/1144 (3%)
Query: 1 MASNSQHQQQHRRSQSAAQS-----SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVF 55
MAS S+ + S S +Q + T +N + ++ KAIAQY DARLHAVF
Sbjct: 1 MASTSRGGAEKTTSSSISQRHQLQITTTKETEQQNNNVNNKSMKKAIAQYIEDARLHAVF 60
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAY 115
EQSG+S FDYSQS+R + SVPEQQI+AYL+KIQRGG IQPFG IAVDE +FRV+AY
Sbjct: 61 EQSGDS---FDYSQSIRLTTASVPEQQITAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAY 117
Query: 116 SENAGEMLGLAPQSVPNLEKQEI-----LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
SENA +MLG+ PQSVP+LE + IGTDVR+LFT SS VLLEKAF AREI+L+N
Sbjct: 118 SENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLFTHSSGVLLEKAFSAREISLMN 177
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
PIWIHS++TGKPFY ILHR+DVG+VIDLEPAR+EDPALSIAGAVQSQKLAVRAISQLQSL
Sbjct: 178 PIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSL 237
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+K+LCD VVESVR+LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDI
Sbjct: 238 PGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRIDLEPYMGLHYPATDI 297
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLFKQNRVRMIVDC+A+P+ V QDE L+QP+CLVGSTLRAPHGCHAQYMANMGSI
Sbjct: 298 PQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLVGSTLRAPHGCHAQYMANMGSI 357
Query: 351 ASLALAVIINGNDEEAVG----GRSTTRLW--------------------------AFGL 380
ASLA+AVIINGNDE+ VG GR++ RLW AFGL
Sbjct: 358 ASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGL 417
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QLNMELQLA+Q EK VLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAAL+YQG Y
Sbjct: 418 QLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALFYQGNY 477
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
YPLGVTPTE+QI+DI+EWLL +HGDSTGLSTDSLADAGYP AA+LGDAVCGMAVAYIT++
Sbjct: 478 YPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEK 537
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS+ WDNAEMDAI
Sbjct: 538 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAI 597
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLILRDSF++AE ++SKAVV+ + +LELQGVDELSSVAREMVRLIETATAPIFAVD
Sbjct: 598 HSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDELSSVAREMVRLIETATAPIFAVD 657
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIK 680
V+G +NGWNAKV+ELTGL VE+AMGKSL+HDLVYKE +E VD LL HALKGEEDKNVEIK
Sbjct: 658 VNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKESQETVDKLLSHALKGEEDKNVEIK 717
Query: 681 LRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIV 740
+RTFG N+ KAVF+VVNACSSKDYTNNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIV
Sbjct: 718 MRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIV 777
Query: 741 HSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALT 800
HSPN LIPPIFASD+NTCC EWN AMEKL+GWSR D+IGK+LVGEVFGS C+LKG DA+T
Sbjct: 778 HSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTDVIGKLLVGEVFGSFCQLKGSDAMT 837
Query: 801 KFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPEL 860
KFMI LHNA GGQDT+KFPF D +GKYVQ LTANKRVN++GQI+GAFCFLQI SPEL
Sbjct: 838 KFMIVLHNALGGQDTDKFPFSFVDGHGKYVQTFLTANKRVNIDGQIIGAFCFLQIVSPEL 897
Query: 861 QQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAA 920
QQALTVQRQQ+ CFAR+KELAYICQE+KNPLSG+ FTNSLLE+T LT++QKQLLETSAA
Sbjct: 898 QQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIRFTNSLLESTCLTDEQKQLLETSAA 957
Query: 921 CEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEE 980
CEKQMLKII+D+DL+SI+DGSL EK EFLL +VINAVVSQVM+LLRERNLQLIRDIPEE
Sbjct: 958 CEKQMLKIIRDIDLDSIDDGSLALEKQEFLLENVINAVVSQVMLLLRERNLQLIRDIPEE 1017
Query: 981 IKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV 1040
IKTLAVYGDQ R QQVLADFL+N+VRY+PS +GWVEIHV P +KQ S+G T++H EFRMV
Sbjct: 1018 IKTLAVYGDQLRFQQVLADFLMNVVRYAPSPDGWVEIHVFPRIKQISDGLTLLHAEFRMV 1077
Query: 1041 CPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELP 1100
CPGEGLPPEL+QDMFH+S+W+TQEGLGLSM RKI+KLMNGEVQY+RE+ERCYFL++ ELP
Sbjct: 1078 CPGEGLPPELIQDMFHNSKWVTQEGLGLSMSRKIIKLMNGEVQYVREAERCYFLVVLELP 1137
Query: 1101 MPRR 1104
+ RR
Sbjct: 1138 VTRR 1141
>gi|78643946|emb|CAJ21336.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1852 bits (4798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 913/1154 (79%), Positives = 998/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + QSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQVQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQA RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+G FCFLQIASPELQQ+L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPELQQSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643904|emb|CAJ21315.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1852 bits (4798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 914/1154 (79%), Positives = 998/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNME QLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMEFQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG ++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGQVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVKLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643890|emb|CAJ21308.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1852 bits (4798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 894/1064 (84%), Positives = 965/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + QSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQVQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCC+LKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643922|emb|CAJ21324.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1852 bits (4797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 914/1154 (79%), Positives = 999/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K F FDRN K VQ LLTANKRVN++G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLTFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643886|emb|CAJ21306.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1852 bits (4797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 895/1064 (84%), Positives = 965/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+G FCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643874|emb|CAJ21300.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1852 bits (4796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 916/1154 (79%), Positives = 998/1154 (86%), Gaps = 56/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNM--NIIGAFCFLQIASPELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1016 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1075
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1076 PRSFLNCKLTLVKLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1128
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1129 WFLLLHRHQSRSIT 1142
>gi|78643932|emb|CAJ21329.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1852 bits (4796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 913/1154 (79%), Positives = 998/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFK
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKH 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHA YM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF F+RN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFERNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643880|emb|CAJ21303.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1851 bits (4795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 914/1154 (79%), Positives = 997/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + QSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQVQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMV Y+ S+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVSYTQSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVKLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643930|emb|CAJ21328.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1850 bits (4793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 910/1147 (79%), Positives = 997/1147 (86%), Gaps = 40/1147 (3%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEA+GKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAVGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K F FDRN K VQ LLTANKRVN++G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLTFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERC----YFLIIFELPMPR 1103
P + + + +EG+ + + L + G + ++ E Y L I+ L + R
Sbjct: 1078 PRSFLNCKLTLVKLHREGMVPKIQFQGLSVSQGRLIWLSFPENTTVALYPLTIWFLLLHR 1137
Query: 1104 RGSKSIT 1110
S+SIT
Sbjct: 1138 HQSRSIT 1144
>gi|78643896|emb|CAJ21311.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1850 bits (4793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 894/1064 (84%), Positives = 964/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSH AKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHPAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE T LTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTGLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643934|emb|CAJ21330.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1850 bits (4792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 913/1154 (79%), Positives = 997/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQA RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+G FCFLQIASPE Q +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPEFQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643866|emb|CAJ21296.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1850 bits (4792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 915/1154 (79%), Positives = 998/1154 (86%), Gaps = 56/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN+ I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1016 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1075
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1076 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1128
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1129 WFLLLHRHQSRSIT 1142
>gi|78643876|emb|CAJ21301.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1849 bits (4789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 892/1066 (83%), Positives = 966/1066 (90%), Gaps = 29/1066 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWS+G+++GKMLVGEVFG+CC+LKGP+ALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSKGEVVGKMLVGEVFGNCCKLKGPNALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EK EFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKPEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV 1040
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR +
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYL 1063
>gi|78643888|emb|CAJ21307.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1849 bits (4789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 893/1064 (83%), Positives = 963/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + S+PE+QI+AYLSKIQRGGHIQPFGC A DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSLPEEQITAYLSKIQRGGHIQPFGCMSAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMI LHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIGLHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIAS ELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASLELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643860|emb|CAJ21293.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1848 bits (4788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 895/1064 (84%), Positives = 964/1064 (90%), Gaps = 31/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA +E +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNM--NIIGAFCFLQIASPELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1016 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643870|emb|CAJ21298.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1847 bits (4785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 895/1064 (84%), Positives = 964/1064 (90%), Gaps = 31/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN+ I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1016 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643868|emb|CAJ21297.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1847 bits (4785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 894/1064 (84%), Positives = 963/1064 (90%), Gaps = 31/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM I+GAFCFLQI SPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNM--NIIGAFCFLQIVSPELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1016 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643940|emb|CAJ21333.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1847 bits (4785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 910/1154 (78%), Positives = 998/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA +E +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQA RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHA YM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCC+LKGP++LTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPNSLTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643928|emb|CAJ21327.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1847 bits (4785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 909/1147 (79%), Positives = 994/1147 (86%), Gaps = 40/1147 (3%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSTTCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDS GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+G FCF QIASPE Q +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFFQIASPEFQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERC----YFLIIFELPMPR 1103
P + + + +EG+ + + L + G + ++ E Y L I+ L + R
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVSQGRLIWLSFPENTTVALYPLTIWFLLLHR 1137
Query: 1104 RGSKSIT 1110
S+SIT
Sbjct: 1138 HQSRSIT 1144
>gi|78643864|emb|CAJ21295.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1847 bits (4784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 894/1064 (84%), Positives = 963/1064 (90%), Gaps = 31/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + QSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQVQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN+ I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1016 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643942|emb|CAJ21334.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1847 bits (4783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 913/1154 (79%), Positives = 997/1154 (86%), Gaps = 56/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFK
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKH 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCC+LKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNM--NIIGAFCFLQIASPELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1016 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1075
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1076 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1128
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1129 WFLLLHRHQSRSIT 1142
>gi|78643924|emb|CAJ21325.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1847 bits (4783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 910/1154 (78%), Positives = 996/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEHSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHA YM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF F+RN K VQ LLTANKRVN++G I+G FCF QIASPE Q +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFERNEKNVQTLLTANKRVNIKGDIIGPFCFFQIASPEFQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643882|emb|CAJ21304.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1846 bits (4782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 892/1064 (83%), Positives = 964/1064 (90%), Gaps = 29/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSTTCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGP+ALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPNALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K F FDRN K VQ LLTANKRVN++G I+GAFCFLQIAS ELQ +L VQ+QQEKK
Sbjct: 838 TDKLTFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASLELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1018 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643862|emb|CAJ21294.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1844 bits (4776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 893/1064 (83%), Positives = 963/1064 (90%), Gaps = 31/1064 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSI GAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSITGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEA+GKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAVGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN+ I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR
Sbjct: 1016 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643872|emb|CAJ21299.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1843 bits (4774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 913/1154 (79%), Positives = 997/1154 (86%), Gaps = 56/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN+ I+GAFCFLQIAS ELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASLELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMVRY+P++ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1016 QVLADFLLNMVRYAPASAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1075
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1076 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1128
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1129 WFLLLHRHQSRSIT 1142
>gi|78643948|emb|CAJ21337.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1842 bits (4770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 891/1066 (83%), Positives = 962/1066 (90%), Gaps = 31/1066 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FR IAY+ENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRGIAYNENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
M GL PQSVP+LEKQEIL +G DVR LF SS+VLLEK FGAREITLLNPIWIHSKN+G
Sbjct: 118 NMRGLTPQSVPSLEKQEILFVGGDVRILFRPSSAVLLEKTFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN+ I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV 1040
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR +
Sbjct: 1016 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYL 1061
>gi|78643950|emb|CAJ21338.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1842 bits (4770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 891/1066 (83%), Positives = 962/1066 (90%), Gaps = 31/1066 (2%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FR IAY+ENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRGIAYNENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
M GL PQSVP+LEKQEIL +G DVR LF SS+VLLEK FGAREITLLNPIWIHSKN+G
Sbjct: 118 NMRGLTPQSVPSLEKQEILFVGGDVRILFRPSSAVLLEKTFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTAMEKLTGWSRG+++GKMLVGEVFGSCC+LKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN+ I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKKS 895
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 896 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 955
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 956 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1015
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV 1040
QVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EFR +
Sbjct: 1016 QVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFRYL 1061
>gi|78643936|emb|CAJ21331.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1841 bits (4769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 909/1154 (78%), Positives = 996/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + QSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQVQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFK
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKH 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCC+LKGP++LTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPNSLTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVNM+G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMV Y+ S+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVIYTQSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVMLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643926|emb|CAJ21326.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1839 bits (4763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 910/1154 (78%), Positives = 995/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SVRT + SVPE+QI+AYLSKIQRGGHIQPFGC IA DE +FRVIAYSENA
Sbjct: 58 TGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
+MLGL PQSVP+LEKQEIL +G DVR LF SS+VLLEKAFGAREITLLNPIWIHSKN+G
Sbjct: 118 DMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSI GAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSITGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRGLTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDS GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCC+LKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+GAFCFLQIASPELQ +L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMV Y+ S+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVIYTQSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLVKLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|78643944|emb|CAJ21335.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1839 bits (4763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 909/1154 (78%), Positives = 995/1154 (86%), Gaps = 54/1154 (4%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MAS SQ +Q ++ + + AQSSGTSN+R HH+ TES VSKAIAQYTVDA+LHAVFEQSG
Sbjct: 1 MASQSQ-RQSNQPAHNQAQSSGTSNMRQHHHPTES--VSKAIAQYTVDAQLHAVFEQSGG 57
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
+GKSFDYS+SV+T + SVPE+QI+AYLSKIQRGGHIQPFGC IA +E +FR IAYSENA
Sbjct: 58 TGKSFDYSKSVKTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRGIAYSENAK 117
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
MLGL PQSVP+LEKQEIL +G DVR F SS+VLLEK FGAREITLLNPIWIHSKN+G
Sbjct: 118 NMLGLTPQSVPSLEKQEILFVGGDVRIFFRPSSAVLLEKTFGAREITLLNPIWIHSKNSG 177
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
TVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHA P+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYM NMGSIASLA+AVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 361 GNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GNDEEA+GGR++ RLW AFGLQLNMELQLASQL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYPLGVTPTE QIKD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLLT HGD TGLSTDSLADAGYP AA LGDAVCGMAVAYI +RDFLFWFRSHTAKE+
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIETATAPIFAVDV G +NGWNAKVAE
Sbjct: 598 EATNSKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDLVYKEYEEIVD L+H A+KGEEDKNVEIKLRTF +E++KKAVF
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDK++ IQGDYKAIVHSPNP IPPIFASD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
ENTCC EWNTA+EKLTGWSRG+++GKMLVGEVFGSCCRLKGPDALTKFMIALHNA GG D
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGID 837
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K PF FDRN K VQ LLTANKRVN++G I+GAFCFLQIASPELQQ+L VQ+QQEKK
Sbjct: 838 TDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQQSLKVQKQQEKKS 897
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAACEKQ+LKII+D+DL
Sbjct: 898 FARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDL 957
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
ESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEIKTLAVYGDQARIQ
Sbjct: 958 ESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQ 1017
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV-------CPGEGLP 1047
QVLADFLLNMV Y+ S+ GWVEIHV PTLKQ S+G T+VH EFR + G P
Sbjct: 1018 QVLADFLLNMVIYTQSSAGWVEIHVCPTLKQISDGHTLVHTEFRYLERVLQTRMLGLQHP 1077
Query: 1048 PELVQDMFHSSRWMTQEGL-------GLSMCRKILKLMNGEVQYIRESERC----YFLII 1096
P + + + +EG+ GLS+C+ G + ++ E Y L I
Sbjct: 1078 PRSFLNCKLTLIKLHREGMVPKIQFQGLSVCQ-------GRLIWLSFPENTTVALYPLTI 1130
Query: 1097 FELPMPRRGSKSIT 1110
+ L + R S+SIT
Sbjct: 1131 WFLLLHRHQSRSIT 1144
>gi|312282447|dbj|BAJ34089.1| unnamed protein product [Thellungiella halophila]
Length = 1172
Score = 1836 bits (4755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 877/1133 (77%), Positives = 977/1133 (86%), Gaps = 38/1133 (3%)
Query: 5 SQHQQQHRRSQSAAQSSGTSNIRAHHNA---TESMTVSKAIAQYTVDARLHAVFEQSGES 61
S H H + AQSSGT ++R + T+SM SKAI QYTVDARLHAVFEQSGES
Sbjct: 24 SLHTTTHNNRREQAQSSGTKSLRPQNQPQSHTDSM--SKAIQQYTVDARLHAVFEQSGES 81
Query: 62 GKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENA 119
GKSFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE+TFR+I YSENA
Sbjct: 82 GKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESTFRIIGYSENA 141
Query: 120 GEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNT 179
EMLGL PQSVP+LEK EIL +GTDVR+LFT+SSS+LLE+AF AREITLLNP+WIHSKNT
Sbjct: 142 REMLGLTPQSVPSLEKPEILAMGTDVRSLFTASSSILLERAFVAREITLLNPVWIHSKNT 201
Query: 180 GKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC 239
GKPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC
Sbjct: 202 GKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC 261
Query: 240 DTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFK 299
DTVVESVR LTGYDRVMVY+FHEDEHGEVVAES+R DLEPY GLHYPATDIPQASRFLFK
Sbjct: 262 DTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESRRDDLEPYIGLHYPATDIPQASRFLFK 321
Query: 300 QNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVII 359
QNRVRMIVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVII
Sbjct: 322 QNRVRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 381
Query: 360 NGNDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLAS 390
NGN+++ GGR++ RLW AFGLQLNMELQLA
Sbjct: 382 NGNEDDGSNVAGGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLAL 441
Query: 391 QLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTET 450
Q+SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV PTE
Sbjct: 442 QMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEA 501
Query: 451 QIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHT 510
QIKD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT
Sbjct: 502 QIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHT 561
Query: 511 AKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDS 570
AKEIKWGGAK HPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDS
Sbjct: 562 AKEIKWGGAKRHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDS 621
Query: 571 FRDAEAS-NSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWN 629
F+++EA+ NSK A QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWN
Sbjct: 622 FKESEAALNSKTADGAVQCMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWN 681
Query: 630 AKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR 689
AK+AELTGLSVEEAMGKSLV DL+YKE EE VD LL AL+GEEDKNVE+KL+TF E +
Sbjct: 682 AKIAELTGLSVEEAMGKSLVSDLIYKENEETVDKLLSRALRGEEDKNVEVKLKTFSPELQ 741
Query: 690 KKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPP 749
KAVFVVVNACSSKDY NNIVGVCFVGQDVTDQK+VMDKFI+IQGDYKAIVHSPNPLIPP
Sbjct: 742 GKAVFVVVNACSSKDYLNNIVGVCFVGQDVTDQKIVMDKFINIQGDYKAIVHSPNPLIPP 801
Query: 750 IFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNA 809
IFA+DENTCC EWNTAME LTGWSR ++IGKMLVGEVFGSCCRLKGPDA+TKFMI LHNA
Sbjct: 802 IFAADENTCCLEWNTAMENLTGWSRSEVIGKMLVGEVFGSCCRLKGPDAITKFMIVLHNA 861
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GGQ+T+KFPFP FDR GK+VQALLTANKRV+++G+++GAFCF+QI SPELQQA+ VQR+
Sbjct: 862 IGGQETDKFPFPFFDRKGKFVQALLTANKRVSLDGKVIGAFCFVQIPSPELQQAIAVQRR 921
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKII 929
Q+ +CF + KELAYICQ IKNPLSG+ FTNSLLEATDL EDQKQ LETS +CEKQ+ +I+
Sbjct: 922 QDTECFTKAKELAYICQVIKNPLSGLRFTNSLLEATDLNEDQKQFLETSVSCEKQISRIV 981
Query: 930 KDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGD 989
D+DLE IEDGS + E+ EF LGSVINA+VSQ M LL+ER LQLIRDIPEEIK++AVYGD
Sbjct: 982 SDMDLEGIEDGSFKLERVEFFLGSVINAIVSQAMFLLKERGLQLIRDIPEEIKSIAVYGD 1041
Query: 990 QARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPE 1049
Q RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + + EFRM CPGEGLPPE
Sbjct: 1042 QTRIQQLLAEFLLSIIRYAPSQE-WVEIHLNQVSKQMADGFSAIRTEFRMACPGEGLPPE 1100
Query: 1050 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
LV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+P
Sbjct: 1101 LVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVP 1153
>gi|422898335|dbj|BAM67033.1| phytochrome b [Chrysanthemum seticuspe f. boreale]
Length = 1130
Score = 1829 bits (4737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 866/1097 (78%), Positives = 965/1097 (87%), Gaps = 30/1097 (2%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMS---HSVPEQQISAYLSKIQRG 93
++SKAIAQY VDARLHAV+EQSG SGKSFDYSQS++T + S+ EQQ++AYLSKIQRG
Sbjct: 34 SMSKAIAQYAVDARLHAVYEQSGGSGKSFDYSQSIKTSATNDDSIAEQQMTAYLSKIQRG 93
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
GHIQPFGC IA+D TF+VIA+SENA E LGLAPQSVP+LEK EILTIGTDV+TLF +SS
Sbjct: 94 GHIQPFGCMIAIDNVTFKVIAFSENARERLGLAPQSVPSLEKPEILTIGTDVKTLFMNSS 153
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGA 213
+ LE AF AREITL NP + SKN+GKPFYAILHR+DVGIVIDLEP RTEDP +S AG+
Sbjct: 154 VLKLEHAFRAREITLSNPHLVQSKNSGKPFYAILHRIDVGIVIDLEPVRTEDPGISGAGS 213
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
VQSQKLAVRAIS++Q+LPGGDIKLLCDTVV++VR+LTGYDRVMVY+FHEDEHGEVVAESK
Sbjct: 214 VQSQKLAVRAISKVQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHEDEHGEVVAESK 273
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DL+PY GLHYPATDIPQASRFLF+QNRVRMIVDC+A P+ V+QD+ LMQPLCLVGSTL
Sbjct: 274 RADLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCYANPVRVVQDDALMQPLCLVGSTL 333
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW----------------- 376
RAPHGCHAQYMANMGS ASLALAVIINGN E+ GGR T LW
Sbjct: 334 RAPHGCHAQYMANMGSRASLALAVIINGN-EDGAGGRGTMGLWGLVVCHHTSARCIPFPL 392
Query: 377 ---------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
AFGLQLN+ELQLASQ+SEK +LRTQTLLCDMLLRDSP GIVTQSPSIMDLV
Sbjct: 393 RHACEFLMQAFGLQLNLELQLASQMSEKRILRTQTLLCDMLLRDSPTGIVTQSPSIMDLV 452
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYYQGKYYP+G+TPTE+QIKDIV+WLL H DSTGLSTDSLADAGYP AATLGD
Sbjct: 453 KCDGAALYYQGKYYPIGITPTESQIKDIVDWLLACHTDSTGLSTDSLADAGYPGAATLGD 512
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AVCGMAVAYIT +DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF AFLEVVKS
Sbjct: 513 AVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKS 572
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPW+N+EMDAIHSLQLILRDSF+D++ SNSKAV+ Q+ ++ LQG+DELSSVAREMVR
Sbjct: 573 RSLPWENSEMDAIHSLQLILRDSFKDSDESNSKAVIKVQIDEMGLQGMDELSSVAREMVR 632
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
LIETATAPIFAVDV G +NGWNAK+AELTGLSV EAMGKSLV DL+YKE EE V LL +
Sbjct: 633 LIETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVQDLIYKESEETVVKLLQN 692
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMD 727
A++GEEDKNVEIKL+TF AVFVVVNACSSKDYT+NIVGVCFVGQDVT QK+VMD
Sbjct: 693 AIQGEEDKNVEIKLKTFNLAQEDDAVFVVVNACSSKDYTDNIVGVCFVGQDVTRQKVVMD 752
Query: 728 KFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF 787
KF+ IQGDYKAI+HSPN LIPPIFASDENTCCSEWNTAMEKLTGW R D+IGKMLVGE+F
Sbjct: 753 KFVQIQGDYKAIIHSPNALIPPIFASDENTCCSEWNTAMEKLTGWGREDVIGKMLVGEIF 812
Query: 788 GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIV 847
GSCCRLKGPD+LTKFMI LHNA GGQDT+K+PF FDR GKYVQALLTANKRVN+ G++
Sbjct: 813 GSCCRLKGPDSLTKFMIILHNAIGGQDTDKYPFSFFDRRGKYVQALLTANKRVNLGGEVT 872
Query: 848 GAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDL 907
GAFCF+QIASPELQQA +QRQQE KCF R+KELAYIC EIKNPLSG+ F NSLLEATDL
Sbjct: 873 GAFCFVQIASPELQQAFKIQRQQENKCFERMKELAYICHEIKNPLSGIRFANSLLEATDL 932
Query: 908 TEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLR 967
TEDQKQLLETSAAC+KQMLKIIKDVD+E+I++G LE EK +FLLG+VI+AVVSQVM++LR
Sbjct: 933 TEDQKQLLETSAACQKQMLKIIKDVDMENIQEGHLELEKHDFLLGNVIDAVVSQVMLILR 992
Query: 968 ERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSS 1027
+R +QLIRDIPE+IKTL VYGDQ R+QQVL +FLLNMVR+SPS GWVEI VR TLKQ
Sbjct: 993 DRGVQLIRDIPEDIKTLTVYGDQTRVQQVLTNFLLNMVRHSPSPNGWVEIQVRSTLKQIF 1052
Query: 1028 EGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRE 1087
+G TIVH +FRMVCPG GLPPELVQDMFHSS+W T+EGLGLSMCRKILKLMNG+VQYIRE
Sbjct: 1053 DGMTIVHIDFRMVCPGNGLPPELVQDMFHSSQWTTEEGLGLSMCRKILKLMNGDVQYIRE 1112
Query: 1088 SERCYFLIIFELPMPRR 1104
SERCYF I+ ELP+P R
Sbjct: 1113 SERCYFHIVLELPLPNR 1129
>gi|124359940|gb|ABN07956.1| GAF; Heavy metal sensor kinase [Medicago truncatula]
Length = 1152
Score = 1826 bits (4730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 877/1113 (78%), Positives = 984/1113 (88%), Gaps = 42/1113 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYLSKIQR 92
++ KAIAQYT DARLHAVFEQSG+S FDYSQS+R S SVPEQQI+AYL+KIQR
Sbjct: 43 SMKKAIAQYTEDARLHAVFEQSGDS---FDYSQSIRLTTAAHSQSVPEQQITAYLAKIQR 99
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEI-----LTIGTDVRT 147
GG IQPFG IAVDE +FRV+AYSENA +MLG+ PQSVP+LE + IGTDVR+
Sbjct: 100 GGFIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRS 159
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LFT SS VLLEKAF AREI+L+NPIWIHS++TGKPFY ILHR+DVG+VIDLEPAR+EDPA
Sbjct: 160 LFTHSSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPA 219
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
LSIAGAVQSQKLAVRAISQLQSLPGGD+K+LCD VVESVR+LTGYDRVMVY+FHEDEHGE
Sbjct: 220 LSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGE 279
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
VVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDC+A+P+ V QDE L+QP+C
Sbjct: 280 VVAESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVC 339
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG----GRSTTRLW------- 376
LVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGNDE+ VG GR++ RLW
Sbjct: 340 LVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHH 399
Query: 377 -------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIV 417
AFGLQLNMELQLA+Q EK VLRTQTLLCDMLLRDSP GIV
Sbjct: 400 TSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIV 459
Query: 418 TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADA 477
TQSPSIMDLVKC+GAAL+YQG YYPLGVTPTE+QI+DI+EWLL +HGDSTGLSTDSLADA
Sbjct: 460 TQSPSIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADA 519
Query: 478 GYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 537
GYP AA+LGDAVCGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS
Sbjct: 520 GYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 579
Query: 538 FKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDE 597
FKAFLEVVKSRS+ WDNAEMDAIHSLQLILRDSF++AE ++SKAVV+ + +LELQGVDE
Sbjct: 580 FKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDE 639
Query: 598 LSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEY 657
LSSVAREMVRLIETATAPIFAVDV+G +NGWNAKV+ELTGL VE+AMGKSL+HDLVYKE
Sbjct: 640 LSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKES 699
Query: 658 EEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQ 717
+E VD LL HALKGEEDKNVEIK+RTFG N+ KAVF+VVNACSSKDYTNNIVGVCFVGQ
Sbjct: 700 QETVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQ 759
Query: 718 DVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDI 777
DVT QK+VMDKFI+IQGDYKAIVHSPN LIPPIFASD+NTCC EWN AMEKL+GWSR D+
Sbjct: 760 DVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTDV 819
Query: 778 IGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
IGK+LVGEVFGS C+LKG DA+TKFMI LHNA GGQDT+KFPF DR+GK+VQ LTAN
Sbjct: 820 IGKLLVGEVFGSFCQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFVDRHGKFVQTFLTAN 879
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
KRVNM+GQI+GAFCFLQI SPELQQALTVQRQQ+ CFAR+KELAYICQE+KNPLSG+ F
Sbjct: 880 KRVNMDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIRF 939
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
TNSLLE+T LT++QKQLLETS ACEKQMLKII+D+DL+ I++GSLE EK EFLL +VINA
Sbjct: 940 TNSLLESTCLTDEQKQLLETSVACEKQMLKIIRDIDLDIIDNGSLELEKREFLLENVINA 999
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
VVSQVM+LLRERNLQLIRDIPEEIK LAVYGDQ RIQQVLADFL+N+VRY+PS +GWVEI
Sbjct: 1000 VVSQVMLLLRERNLQLIRDIPEEIKALAVYGDQLRIQQVLADFLMNVVRYAPSPDGWVEI 1059
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKL 1077
HV P +KQ S+G T++H EFRMVCPGEGLPPEL+QDMFH+S+W+TQEGLGLSM RKI+KL
Sbjct: 1060 HVFPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFHNSKWVTQEGLGLSMSRKIIKL 1119
Query: 1078 MNGEVQYIRESERCYFLIIFELPMPRRGSKSIT 1110
MNGEVQY+RE+ERCYFL++ ELP+ RR K++
Sbjct: 1120 MNGEVQYVREAERCYFLVVLELPVTRRSLKNVN 1152
>gi|57791646|gb|AAW56591.1| phytochrome B [Arabidopsis lyrata]
Length = 1160
Score = 1825 bits (4728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 878/1136 (77%), Positives = 978/1136 (86%), Gaps = 42/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R ESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 14 SSSHTTNNRRGGEQAQSSGTKSLRPR----ESM--SKAIQQYTVDARLHAVFEQSGESGK 67
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 68 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 127
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 128 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 187
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT
Sbjct: 188 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 247
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 248 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 307
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+A P+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 308 RVRMIVDCNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 367
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+E+ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 368 NEEDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 427
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 428 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 487
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 488 KDVVEWLLANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 547
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPR SF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 548 EIKWGGAKHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 607
Query: 573 DAEAS-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ NSKAV A ++ QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 608 ESEAAMNSKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 667
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 668 NAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPEL 727
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNAC SKDY NNIVGVCFVGQDVT QKLVMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 728 QGKAVFVVVNACFSKDYLNNIVGVCFVGQDVTGQKLVMDKFINIQGDYKAIVHSPNPLIP 787
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKMLVGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 788 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMLVGEVFGSCCMLKGPDALTKFMIVLHN 847
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQ+T+KFPFP FDRNGK+VQALLTANKRV+++G+++GAFCFLQI SPELQQAL VQR
Sbjct: 848 AIGGQETDKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQR 907
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 908 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 967
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS E + AEF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 968 VGDMDLESIEDGSFELKMAEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIVVFG 1027
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ+++G T + EFRM CPGEGLPP
Sbjct: 1028 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQAADGFTAIRTEFRMACPGEGLPP 1086
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YF II ELP+PR+
Sbjct: 1087 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFFIILELPVPRK 1142
>gi|39939388|gb|AAR32737.1| phytochrome B [Arabidopsis thaliana]
gi|164597996|gb|ABY61305.1| phytochrome B [Arabidopsis thaliana]
gi|164597998|gb|ABY61306.1| phytochrome B [Arabidopsis thaliana]
gi|164598004|gb|ABY61309.1| phytochrome B [Arabidopsis thaliana]
gi|164598006|gb|ABY61310.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1825 bits (4726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 875/1136 (77%), Positives = 977/1136 (86%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 19 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 75
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 76 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 135
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 136 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 195
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 196 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 255
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 256 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 315
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 316 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 375
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 376 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 435
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 436 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 495
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 496 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 555
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 556 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 615
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 616 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 675
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 676 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 735
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 736 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 795
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 796 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 855
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 856 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 915
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 916 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 975
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
I D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 976 IGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1035
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1036 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQMADGFAAIRTEFRMACPGEGLPP 1094
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1095 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1150
>gi|57791644|gb|AAW56590.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1825 bits (4726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 875/1136 (77%), Positives = 977/1136 (86%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 19 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 75
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 76 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 135
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 136 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 195
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 196 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 255
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 256 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 315
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 316 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 375
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 376 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 435
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 436 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 495
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 496 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 555
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 556 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 615
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 616 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 675
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 676 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 735
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 736 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 795
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 796 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 855
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 856 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 915
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 916 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 975
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
I D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 976 IGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1035
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1036 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQMADGFAAIRTEFRMACPGEGLPP 1094
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1095 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1150
>gi|164598000|gb|ABY61307.1| phytochrome B [Arabidopsis thaliana]
gi|164598002|gb|ABY61308.1| phytochrome B [Arabidopsis thaliana]
gi|164598010|gb|ABY61312.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1825 bits (4726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 875/1136 (77%), Positives = 977/1136 (86%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 19 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 75
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 76 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 135
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 136 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 195
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT
Sbjct: 196 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 255
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 256 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 315
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 316 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 375
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 376 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 435
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 436 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 495
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 496 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 555
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 556 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 615
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 616 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 675
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 676 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFTPEL 735
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 736 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 795
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 796 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 855
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 856 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 915
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 916 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 975
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 976 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1035
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1036 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQMADGFAAIRTEFRMACPGEGLPP 1094
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1095 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1150
>gi|297836762|ref|XP_002886263.1| phytochrome B [Arabidopsis lyrata subsp. lyrata]
gi|297332103|gb|EFH62522.1| phytochrome B [Arabidopsis lyrata subsp. lyrata]
Length = 1163
Score = 1825 bits (4726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 877/1136 (77%), Positives = 978/1136 (86%), Gaps = 42/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R ESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 17 SSSHTTNNRRGGEQAQSSGTKSLRPR----ESM--SKAIQQYTVDARLHAVFEQSGESGK 70
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 71 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 130
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 131 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 190
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT
Sbjct: 191 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 250
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 251 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 310
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+A P+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 311 RVRMIVDCNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 370
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+E+ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 371 NEEDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 430
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 431 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 490
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 491 KDVVEWLLANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 550
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPR SF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 551 EIKWGGAKHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 610
Query: 573 DAEAS-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ NSKAV A ++ QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 611 ESEAAMNSKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 670
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 671 NAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPEL 730
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNAC SKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 731 QGKAVFVVVNACFSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIP 790
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKMLVGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 791 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMLVGEVFGSCCMLKGPDALTKFMIVLHN 850
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQ+T+KFPFP FDRNGK+VQALLTANKRV+++G+++GAFCFLQI SPELQQAL VQR
Sbjct: 851 AIGGQETDKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQR 910
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 911 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 970
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS E + AEF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 971 VGDMDLESIEDGSFELKMAEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIVVFG 1030
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ+++G T + EFRM CPGEGLPP
Sbjct: 1031 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQAADGFTAIRTEFRMACPGEGLPP 1089
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YF II ELP+PR+
Sbjct: 1090 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFFIILELPVPRK 1145
>gi|57791642|gb|AAW56589.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1824 bits (4725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 875/1136 (77%), Positives = 977/1136 (86%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 16 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 72
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 73 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 132
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 133 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 192
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 193 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 252
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 253 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 312
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 313 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 372
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 373 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 432
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 433 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 492
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 493 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 552
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 553 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 612
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 613 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 672
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 673 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 732
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 733 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 792
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 793 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 852
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 853 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 912
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 913 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 972
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
I D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 973 IGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1032
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1033 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQMADGFAAIRTEFRMACPGEGLPP 1091
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1092 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1147
>gi|57791624|gb|AAW56580.1| phytochrome B [Arabidopsis thaliana]
gi|57791626|gb|AAW56581.1| phytochrome B [Arabidopsis thaliana]
gi|57791628|gb|AAW56582.1| phytochrome B [Arabidopsis thaliana]
gi|57791630|gb|AAW56583.1| phytochrome B [Arabidopsis thaliana]
gi|57791632|gb|AAW56584.1| phytochrome B [Arabidopsis thaliana]
gi|57791634|gb|AAW56585.1| phytochrome B [Arabidopsis thaliana]
gi|164597990|gb|ABY61302.1| phytochrome B [Arabidopsis thaliana]
gi|164597992|gb|ABY61303.1| phytochrome B [Arabidopsis thaliana]
gi|164597994|gb|ABY61304.1| phytochrome B [Arabidopsis thaliana]
gi|164598008|gb|ABY61311.1| phytochrome B [Arabidopsis thaliana]
gi|164598012|gb|ABY61313.1| phytochrome B [Arabidopsis thaliana]
gi|164598018|gb|ABY61316.1| phytochrome B [Arabidopsis thaliana]
gi|164598020|gb|ABY61317.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1824 bits (4725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1136 (76%), Positives = 977/1136 (86%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 19 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 75
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 76 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 135
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 136 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 195
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 196 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 255
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 256 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 315
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 316 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 375
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 376 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 435
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 436 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 495
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 496 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 555
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 556 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 615
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 616 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 675
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 676 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 735
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 736 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 795
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 796 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 855
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 856 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 915
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 916 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 975
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 976 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1035
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1036 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQMADGFAAIRTEFRMACPGEGLPP 1094
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1095 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1150
>gi|357448917|ref|XP_003594734.1| Phytochrome b1 [Medicago truncatula]
gi|355483782|gb|AES64985.1| Phytochrome b1 [Medicago truncatula]
Length = 1198
Score = 1823 bits (4722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 877/1111 (78%), Positives = 983/1111 (88%), Gaps = 42/1111 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYLSKIQR 92
++ KAIAQYT DARLHAVFEQSG+S FDYSQS+R S SVPEQQI+AYL+KIQR
Sbjct: 43 SMKKAIAQYTEDARLHAVFEQSGDS---FDYSQSIRLTTAAHSQSVPEQQITAYLAKIQR 99
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEI-----LTIGTDVRT 147
GG IQPFG IAVDE +FRV+AYSENA +MLG+ PQSVP+LE + IGTDVR+
Sbjct: 100 GGFIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRS 159
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LFT SS VLLEKAF AREI+L+NPIWIHS++TGKPFY ILHR+DVG+VIDLEPAR+EDPA
Sbjct: 160 LFTHSSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPA 219
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
LSIAGAVQSQKLAVRAISQLQSLPGGD+K+LCD VVESVR+LTGYDRVMVY+FHEDEHGE
Sbjct: 220 LSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGE 279
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
VVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDC+A+P+ V QDE L+QP+C
Sbjct: 280 VVAESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVC 339
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG----GRSTTRLW------- 376
LVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGNDE+ VG GR++ RLW
Sbjct: 340 LVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHH 399
Query: 377 -------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIV 417
AFGLQLNMELQLA+Q EK VLRTQTLLCDMLLRDSP GIV
Sbjct: 400 TSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIV 459
Query: 418 TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADA 477
TQSPSIMDLVKC+GAAL+YQG YYPLGVTPTE+QI+DI+EWLL +HGDSTGLSTDSLADA
Sbjct: 460 TQSPSIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADA 519
Query: 478 GYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 537
GYP AA+LGDAVCGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS
Sbjct: 520 GYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 579
Query: 538 FKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDE 597
FKAFLEVVKSRS+ WDNAEMDAIHSLQLILRDSF++AE ++SKAVV+ + +LELQGVDE
Sbjct: 580 FKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDE 639
Query: 598 LSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEY 657
LSSVAREMVRLIETATAPIFAVDV+G +NGWNAKV+ELTGL VE+AMGKSL+HDLVYKE
Sbjct: 640 LSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKES 699
Query: 658 EEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQ 717
+E VD LL HALKGEEDKNVEIK+RTFG N+ KAVF+VVNACSSKDYTNNIVGVCFVGQ
Sbjct: 700 QETVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQ 759
Query: 718 DVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDI 777
DVT QK+VMDKFI+IQGDYKAIVHSPN LIPPIFASD+NTCC EWN AMEKL+GWSR D+
Sbjct: 760 DVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTDV 819
Query: 778 IGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
IGK+LVGEVFGS C+LKG DA+TKFMI LHNA GGQDT+KFPF DR+GK+VQ LTAN
Sbjct: 820 IGKLLVGEVFGSFCQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFVDRHGKFVQTFLTAN 879
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
KRVNM+GQI+GAFCFLQI SPELQQALTVQRQQ+ CFAR+KELAYICQE+KNPLSG+ F
Sbjct: 880 KRVNMDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIRF 939
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
TNSLLE+T LT++QKQLLETS ACEKQMLKII+D+DL+ I++GSLE EK EFLL +VINA
Sbjct: 940 TNSLLESTCLTDEQKQLLETSVACEKQMLKIIRDIDLDIIDNGSLELEKREFLLENVINA 999
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
VVSQVM+LLRERNLQLIRDIPEEIK LAVYGDQ RIQQVLADFL+N+VRY+PS +GWVEI
Sbjct: 1000 VVSQVMLLLRERNLQLIRDIPEEIKALAVYGDQLRIQQVLADFLMNVVRYAPSPDGWVEI 1059
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKL 1077
HV P +KQ S+G T++H EFRMVCPGEGLPPEL+QDMFH+S+W+TQEGLGLSM RKI+KL
Sbjct: 1060 HVFPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFHNSKWVTQEGLGLSMSRKIIKL 1119
Query: 1078 MNGEVQYIRESERCYFLIIFELPMPRRGSKS 1108
MNGEVQY+RE+ERCYFL++ ELP+ RR K+
Sbjct: 1120 MNGEVQYVREAERCYFLVVLELPVTRRSLKN 1150
>gi|57791620|gb|AAW56578.1| phytochrome B [Arabidopsis thaliana]
gi|57791622|gb|AAW56579.1| phytochrome B [Arabidopsis thaliana]
gi|164598016|gb|ABY61315.1| phytochrome B [Arabidopsis thaliana]
gi|164598022|gb|ABY61318.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1823 bits (4721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1136 (76%), Positives = 977/1136 (86%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 19 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 75
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 76 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 135
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLG+ PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 136 MLGIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 195
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 196 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 255
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 256 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 315
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 316 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 375
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 376 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 435
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 436 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 495
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 496 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 555
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 556 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 615
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 616 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 675
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 676 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 735
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 736 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 795
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 796 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 855
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 856 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 915
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 916 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 975
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 976 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1035
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1036 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPP 1094
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1095 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1150
>gi|15224231|ref|NP_179469.1| phytochrome B [Arabidopsis thaliana]
gi|130189|sp|P14713.1|PHYB_ARATH RecName: Full=Phytochrome B
gi|16423|emb|CAA35222.1| unnamed protein product [Arabidopsis thaliana]
gi|4185145|gb|AAD08948.1| phytochrome B [Arabidopsis thaliana]
gi|330251714|gb|AEC06808.1| phytochrome B [Arabidopsis thaliana]
Length = 1172
Score = 1823 bits (4721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1136 (76%), Positives = 977/1136 (86%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 23 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 79
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 80 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 139
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLG+ PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 140 MLGIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 199
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 200 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 259
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 260 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 319
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 320 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 379
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 380 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 439
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 440 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 499
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 500 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 559
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 560 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 619
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 620 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 679
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 680 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 739
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 740 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 799
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 800 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 859
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 860 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 919
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 920 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 979
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 980 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1039
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1040 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPP 1098
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1099 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1154
>gi|164597986|gb|ABY61300.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1822 bits (4720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1136 (76%), Positives = 977/1136 (86%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 19 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 75
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 76 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 135
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 136 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 195
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 196 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 255
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 256 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 315
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 316 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 375
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 376 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 435
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 436 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 495
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 496 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 555
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 556 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 615
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 616 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 675
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE + V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 676 NAKIAELTGLSVEEAMGKSLVSDLIYKENKATVNKLLSRALRGDEEKNVEVKLKTFSPEL 735
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 736 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 795
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 796 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 855
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 856 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 915
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 916 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 975
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 976 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1035
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1036 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQMADGFAAIRTEFRMACPGEGLPP 1094
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1095 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1150
>gi|57791618|gb|AAW56577.1| phytochrome B [Arabidopsis thaliana]
Length = 1162
Score = 1822 bits (4720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1136 (76%), Positives = 977/1136 (86%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 20 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 76
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 77 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 136
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLG+ PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 137 MLGIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 196
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 197 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 256
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 257 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 316
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 317 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 376
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 377 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 436
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 437 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 496
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 497 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 556
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 557 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 616
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 617 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 676
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 677 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 736
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 737 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 796
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 797 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 856
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 857 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 916
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 917 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 976
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 977 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1036
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1037 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPP 1095
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1096 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1151
>gi|57791616|gb|AAW56576.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1822 bits (4720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1136 (76%), Positives = 977/1136 (86%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 16 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 72
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 73 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 132
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLG+ PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 133 MLGIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 192
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 193 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 252
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 253 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 312
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 313 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 372
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 373 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 432
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 433 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 492
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 493 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 552
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 553 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 612
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 613 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 672
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 673 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 732
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 733 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 792
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 793 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 852
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 853 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 912
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 913 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 972
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 973 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1032
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1033 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPP 1091
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1092 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1147
>gi|164598014|gb|ABY61314.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1822 bits (4719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1136 (76%), Positives = 976/1136 (85%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 19 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 75
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 76 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 135
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 136 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 195
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 196 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 255
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 256 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 315
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 316 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 375
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 376 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 435
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 436 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 495
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 496 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 555
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 556 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 615
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 616 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 675
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 676 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 735
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 736 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 795
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 796 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 855
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 856 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 915
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 916 RQDTECFTKAKELAYICQVIKNPLSGMRLANSLLEATDLNEDQKQLLETSVSCEKQISRI 975
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 976 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1035
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1036 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQMADGFAAIRTEFRMACPGEGLPP 1094
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1095 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1150
>gi|164597988|gb|ABY61301.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1822 bits (4719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1136 (76%), Positives = 975/1136 (85%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 19 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 75
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 76 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 135
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 136 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 195
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT
Sbjct: 196 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 255
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 256 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 315
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 316 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 375
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 376 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 435
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 436 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 495
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 496 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 555
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 556 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 615
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 616 ESEADMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 675
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 676 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFTPEL 735
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ AVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 736 QGTAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 795
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 796 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 855
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 856 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 915
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 916 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 975
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 976 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1035
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1036 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQMADGFAAIRTEFRMACPGEGLPP 1094
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1095 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1150
>gi|57791638|gb|AAW56587.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1822 bits (4719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1136 (76%), Positives = 976/1136 (85%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 16 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 72
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 73 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 132
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 133 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 192
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 193 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 252
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 253 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 312
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 313 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 372
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 373 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 432
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 433 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 492
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 493 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 552
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 553 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 612
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 613 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 672
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 673 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 732
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 733 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 792
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 793 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 852
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 853 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 912
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 913 RQDTECFTKAKELAYICQVIKNPLSGMRLANSLLEATDLNEDQKQLLETSVSCEKQISRI 972
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 973 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1032
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1033 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQMADGFAAIRTEFRMACPGEGLPP 1091
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1092 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1147
>gi|57791636|gb|AAW56586.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1821 bits (4718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1136 (76%), Positives = 976/1136 (85%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 19 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 75
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 76 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 135
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 136 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 195
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 196 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 255
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 256 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 315
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 316 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 375
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 376 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 435
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 436 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 495
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 496 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 555
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 556 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 615
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 616 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 675
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 676 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 735
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 736 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 795
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 796 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 855
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 856 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 915
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 916 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 975
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 976 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1035
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ K ++G + EFRM CPGEGLPP
Sbjct: 1036 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKLMADGFAAIRTEFRMACPGEGLPP 1094
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1095 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1150
>gi|57791614|gb|AAW56575.1| phytochrome B [Arabidopsis thaliana]
Length = 1162
Score = 1821 bits (4716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1136 (76%), Positives = 976/1136 (85%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 20 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 76
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 77 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 136
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLG+ PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 137 MLGIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 196
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 197 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 256
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 257 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 316
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 317 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 376
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 377 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 436
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 437 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 496
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 497 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 556
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 557 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 616
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 617 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 676
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 677 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 736
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 737 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 796
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++IGKM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 797 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 856
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV +EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 857 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVILEGKVIGAFCFLQIPSPELQQALAVQR 916
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 917 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 976
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 977 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1036
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1037 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPP 1095
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1096 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1151
>gi|57791640|gb|AAW56588.1| phytochrome B [Arabidopsis thaliana]
Length = 1161
Score = 1820 bits (4715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1136 (76%), Positives = 976/1136 (85%), Gaps = 39/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGK 63
+S H +RR AQSSGT ++R N TESM SKAI QYTVDARLHAVFEQSGESGK
Sbjct: 18 SSSHTPNNRRGGEQAQSSGTKSLRPRSN-TESM--SKAIQQYTVDARLHAVFEQSGESGK 74
Query: 64 SFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGE 121
SFDYSQS++T ++ SVPEQQI+AYLS+IQRGG+IQPFGC IAVDE++FR+I YSENA E
Sbjct: 75 SFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENARE 134
Query: 122 MLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGK 181
MLGL PQSVP LEK EIL +GTDVR+LFTSSSS+LLE+AF AREITLLNP+WIHSKNTGK
Sbjct: 135 MLGLMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGK 194
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDT
Sbjct: 195 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 254
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
VVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQN
Sbjct: 255 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 314
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
RVRMIVDC+ATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING
Sbjct: 315 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 374
Query: 362 NDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
N+++ GRS+ RLW AFGLQLNMELQLA Q+
Sbjct: 375 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 434
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI
Sbjct: 435 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 494
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAK
Sbjct: 495 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 554
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+
Sbjct: 555 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 614
Query: 573 DAEASNSKAVVNAQLVDLE----LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA+ + VV+ + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGW
Sbjct: 615 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 674
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLSVEEAMGKSLV DL+YKE E V+ LL AL+G+E+KNVE+KL+TF E
Sbjct: 675 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 734
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIP
Sbjct: 735 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 794
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA+DENTCC EWN AMEKLTGWSR ++I KM+VGEVFGSCC LKGPDALTKFMI LHN
Sbjct: 795 PIFAADENTCCLEWNMAMEKLTGWSRSEVIEKMIVGEVFGSCCMLKGPDALTKFMIVLHN 854
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A GGQDT+KFPFP FDRNGK+VQALLTANKRV++EG+++GAFCFLQI SPELQQAL VQR
Sbjct: 855 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 914
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
+Q+ +CF + KELAYICQ IKNPLSG+ F NSLLEATDL EDQKQLLETS +CEKQ+ +I
Sbjct: 915 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 974
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIEDGS ++ EF LGSVINA+VSQ M LLR+R LQLIRDIPEEIK++ V+G
Sbjct: 975 VGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFG 1034
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ ++G + EFRM CPGEGLPP
Sbjct: 1035 DQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQMADGFAAIRTEFRMACPGEGLPP 1093
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
ELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+PR+
Sbjct: 1094 ELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPRK 1149
>gi|240119405|dbj|BAH79251.1| phytochrome B [Cardamine resedifolia]
Length = 1184
Score = 1815 bits (4702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 876/1136 (77%), Positives = 977/1136 (86%), Gaps = 40/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVS--KAIAQYTVDARLHAVFEQSGES 61
N H RR Q AQSSGT ++R N +S TVS KAI QYTVDARLHAVFEQSG S
Sbjct: 29 NILHTTHPRREQ--AQSSGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGS 86
Query: 62 GKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENA 119
GKSFDYSQS++T ++ SVPEQQI+AYLS+IQRGG IQPFGC IAVDE+TFR+I YSENA
Sbjct: 87 GKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENA 146
Query: 120 GEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNT 179
EMLGL PQSVP+LEK EIL +GTDVR+LF SSS+LLE+AF AREITLLNP+WIHSKNT
Sbjct: 147 REMLGLMPQSVPSLEKPEILAMGTDVRSLFAPSSSILLERAFVAREITLLNPVWIHSKNT 206
Query: 180 GKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC 239
GKPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQSLPGGDIKLLC
Sbjct: 207 GKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLC 266
Query: 240 DTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFK 299
DTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFK
Sbjct: 267 DTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFK 326
Query: 300 QNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVII 359
QNRVRMIVDCHATP+ ++QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVII
Sbjct: 327 QNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 386
Query: 360 NGNDEE---AVGGRSTTRLW--------------------------AFGLQLNMELQLAS 390
NGN+E+ A GGR++ +LW AFGLQLNMELQLA
Sbjct: 387 NGNEEDGRNAGGGRNSMKLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLAL 446
Query: 391 QLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTET 450
Q+SEK VLR QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV PTE
Sbjct: 447 QMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEA 506
Query: 451 QIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHT 510
QIKDIV+WLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT
Sbjct: 507 QIKDIVDWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHT 566
Query: 511 AKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDS 570
AKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDS
Sbjct: 567 AKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDS 626
Query: 571 FRDAEAS-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
F+++EA+ NSKAV A ++ QG+DEL +VAREMVRLIETAT PIFAVD GC+N
Sbjct: 627 FKESEAAMNSKAVDGAVQPCRDMSGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCIN 686
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWNAK+AELTGLSVEEAMGKSLV DL+YKE EE V+ LL ALKGEEDKNVE+KL+TF
Sbjct: 687 GWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALKGEEDKNVELKLKTFSP 746
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
E + KAVF++VNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPL
Sbjct: 747 ELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPL 806
Query: 747 IPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
IPPIFA+DENT C EWN A+EKLTG SRG++IGKMLVGEVFG+CCRLKGPDALT+FMI L
Sbjct: 807 IPPIFAADENTICLEWNAALEKLTGVSRGEVIGKMLVGEVFGNCCRLKGPDALTRFMIVL 866
Query: 807 HNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTV 866
HNA GGQ+T+KFPFP FDRNGK+VQALLTANKRV+++G+++GAFCFLQI SPELQQAL V
Sbjct: 867 HNAIGGQETDKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAV 926
Query: 867 QRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQML 926
QR+Q+ +CF + KELAYICQ IK+PLSG+ F NSLLEAT+L EDQKQ LETS +CEKQ+
Sbjct: 927 QRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQIS 986
Query: 927 KIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAV 986
+I+ D+DLESIEDGS E +AEF LGS+INA+VSQ M LLRER LQLIRDIPEEIK+ AV
Sbjct: 987 RIVGDMDLESIEDGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAV 1046
Query: 987 YGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGL 1046
YGDQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ+++G + EFRM CPGEGL
Sbjct: 1047 YGDQTRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQTADGLRAIRTEFRMACPGEGL 1105
Query: 1047 PPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
PPELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+P
Sbjct: 1106 PPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVP 1161
>gi|6502525|gb|AAF14344.1|AF069305_1 phytochrome B [Pisum sativum]
Length = 1121
Score = 1815 bits (4701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 864/1113 (77%), Positives = 974/1113 (87%), Gaps = 39/1113 (3%)
Query: 34 ESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTM--SHSVPEQQISAYLSKIQ 91
ES+++ KAIAQYT DA LHAVFE+SG+S FDY+QS+R + SVPEQQI+AYL+KIQ
Sbjct: 12 ESLSMRKAIAQYTEDAXLHAVFEKSGDS---FDYAQSIRVTAATESVPEQQITAYLAKIQ 68
Query: 92 RGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILT----IGTDVRT 147
RGG IQPFG IAVDE +FRV+AYSENA +MLG+APQSVP++E + +G DVR+
Sbjct: 69 RGGFIQPFGSMIAVDETSFRVLAYSENARDMLGIAPQSVPSMEDDSSSSSFFSLGVDVRS 128
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF++SSSVLLEKAF AREI+L+NPIWIHS++TGKPFY ILHR+D+G+VIDLEPAR+EDPA
Sbjct: 129 LFSASSSVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDIGVVIDLEPARSEDPA 188
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
LSIAGAVQSQKLAVRAISQLQ+LPGGD+KLLCD VVESVR+LTGYDRVMVY+FHEDEHGE
Sbjct: 189 LSIAGAVQSQKLAVRAISQLQALPGGDVKLLCDAVVESVRELTGYDRVMVYKFHEDEHGE 248
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
VVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDC+A+P+ V QDE L+QP+C
Sbjct: 249 VVAESKRVDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVC 308
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRS----TTRLW------- 376
LVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGNDE+ G + RLW
Sbjct: 309 LVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGGGIGGAARGSMRLWGLVVCHH 368
Query: 377 -------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIV 417
AFGLQLNMELQLA Q EK VL+TQTLLCDMLLRDS GIV
Sbjct: 369 TSARCIPFPLRYACEFLMQAFGLQLNMELQLAVQSLEKRVLKTQTLLCDMLLRDSHTGIV 428
Query: 418 TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADA 477
TQSPSIMDLVKCDGAALYYQG Y+PLGVTPTE+QI+DI++WLL +H DSTGLSTDSLADA
Sbjct: 429 TQSPSIMDLVKCDGAALYYQGNYHPLGVTPTESQIRDIIDWLLAFHSDSTGLSTDSLADA 488
Query: 478 GYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 537
GYP AA+LGDAVCGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ+MHPRSS
Sbjct: 489 GYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQKMHPRSS 548
Query: 538 FKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDE 597
FKAFLEVVK RS+ WDNAEMDAIHSLQLILRDSF++AE ++SKAVV+ + +LELQGVDE
Sbjct: 549 FKAFLEVVKIRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDE 608
Query: 598 LSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEY 657
LSSVAREMVRLIETATAPIFAVDV G +NGWNAKV+ELTGL VEEAMGKSLVHDLVYKE
Sbjct: 609 LSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVSELTGLLVEEAMGKSLVHDLVYKES 668
Query: 658 EEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQ 717
E VD LL HALKGEEDKNVEIK++TFG N+ KAVF+VVNACSSKDYTNNIVGVCFVGQ
Sbjct: 669 RETVDKLLSHALKGEEDKNVEIKMKTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQ 728
Query: 718 DVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDI 777
D+T QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFASD+NTCC EWN AMEKL+GWSR D+
Sbjct: 729 DITGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLSGWSRADV 788
Query: 778 IGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
IGK+LVGEVFGS C+LKG DA+TKFMI LHNA GG DT+KFP DR+GKYV LTAN
Sbjct: 789 IGKLLVGEVFGSFCQLKGSDAMTKFMIVLHNALGGHDTDKFPLSFLDRHGKYVHTFLTAN 848
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
KRVNM+GQI+GAFCFLQI +PELQQALTVQRQQ+ AR+KELAYICQE+KNPLSG+ F
Sbjct: 849 KRVNMDGQIIGAFCFLQIVNPELQQALTVQRQQDSSSLARMKELAYICQEVKNPLSGIRF 908
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
TNSLLE+T LT++QKQLLETS ACEKQMLKI++D+ LESIEDGSLE EK EFLL +VINA
Sbjct: 909 TNSLLESTCLTDEQKQLLETSVACEKQMLKIVRDIALESIEDGSLELEKQEFLLENVINA 968
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
VVSQVM+LLR+R LQLIRDIPEEIK LAVYGDQ RIQQVLADFL+N+VRY+PS +GWVEI
Sbjct: 969 VVSQVMLLLRDRKLQLIRDIPEEIKALAVYGDQLRIQQVLADFLMNVVRYAPSPDGWVEI 1028
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKL 1077
HV P +KQ SEG T++H EFRMVCPGEGLPPEL+QDMFH+SRW+TQEGLGLSM RKI+KL
Sbjct: 1029 HVFPRIKQISEGLTLLHAEFRMVCPGEGLPPELIQDMFHNSRWVTQEGLGLSMSRKIIKL 1088
Query: 1078 MNGEVQYIRESERCYFLIIFELPMPRRGSKSIT 1110
MNGEVQY+RE+ERCYFL++ ELP+ RR SK+I
Sbjct: 1089 MNGEVQYVREAERCYFLVLLELPVTRRSSKAIN 1121
>gi|327242615|gb|AEA41043.1| phytochrome B [Amphicarpaea edgeworthii]
Length = 1105
Score = 1809 bits (4686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 869/1104 (78%), Positives = 963/1104 (87%), Gaps = 35/1104 (3%)
Query: 38 VSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQ 97
+SKA+AQYT DARLHAVFEQSGESGKSFDYSQS+R S +VPEQQI+AYL KIQRGG IQ
Sbjct: 1 MSKAMAQYTEDARLHAVFEQSGESGKSFDYSQSIRITSETVPEQQITAYLLKIQRGGFIQ 60
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEIL---TIGTDVRTLFTSSSS 154
PFG IAVDE +FR++AYS+NA +MLG+ PQSVP+++ + L +GTDVRTLFT SS
Sbjct: 61 PFGSMIAVDERSFRIMAYSDNARDMLGIIPQSVPSMDDDDKLHAFGLGTDVRTLFTHSSG 120
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
VLLEKAF AREI+L+NPIWIHS+ +G+PFY I HRVDVGIVIDLEPARTEDPALSIAGAV
Sbjct: 121 VLLEKAFSAREISLMNPIWIHSRISGRPFYGIFHRVDVGIVIDLEPARTEDPALSIAGAV 180
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAIS+LQSLPGG++KLLCDTVVESVR+LTGYDRVMVY+FHEDEHGEVVAESKR
Sbjct: 181 QSQKLAVRAISKLQSLPGGNVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKR 240
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
PDLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+ + V+QDE L+QPLCLVGSTLR
Sbjct: 241 PDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASSVRVMQDEALLQPLCLVGSTLR 300
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGSIASL +AVIINGNDE+ +G RS+ RLW
Sbjct: 301 APHGCHAQYMANMGSIASLVMAVIINGNDEDGIGSRSSMRLWGLVVCHHTSARCIPFPLR 360
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA Q EK VLRTQTLLCDMLLRDSP GIVTQSPSIM+LVK
Sbjct: 361 YACEFLMQAFGLQLNMELQLAVQSMEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMNLVK 420
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAALYY+G Y PLGVTPTE QI+DI+EWLL +HGDSTGLSTDSLADAGYP AA LGDA
Sbjct: 421 CDGAALYYRGNYCPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLADAGYPGAALLGDA 480
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMAVAYIT++DFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR
Sbjct: 481 VCGMAVAYITEKDFLFWFRSHTGKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 540
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
S+PW+NAEMDAIHSLQLILRDSF+DAE +SK VV + LEL+GVDELSSVAREMVRL
Sbjct: 541 SMPWENAEMDAIHSLQLILRDSFKDAEHRDSKVVVPC-VPKLELRGVDELSSVAREMVRL 599
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPIFAVDV G +NGWNAKV+ELTGL+VEEAMGKSL+ DLV+KE EE VD LL A
Sbjct: 600 IETATAPIFAVDVDGHINGWNAKVSELTGLAVEEAMGKSLIRDLVFKESEETVDRLLSRA 659
Query: 669 LKGEEDKNVEI----KLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKL 724
LKG + +LRTFG E++ KAVFVVVNACSSKDYTNNIVGVCFVGQDVT QK+
Sbjct: 660 LKGILSNTLAFWSIHRLRTFGPEHQNKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKI 719
Query: 725 VMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVG 784
VMDKFI+IQGDYKAIVHSPNPLIPPIFASD+NTCC EWNTAMEKLTGW R D+IGKMLV
Sbjct: 720 VMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRSDVIGKMLVR 779
Query: 785 EVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEG 844
EVFGSCC+LKG D++TKFMI LHNA GGQ+T+KFPF DR+GKY+Q LTANKR+NM G
Sbjct: 780 EVFGSCCQLKGSDSMTKFMIVLHNALGGQETDKFPFSFLDRHGKYIQTFLTANKRINMNG 839
Query: 845 QIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEA 904
QI+GAFCFLQI SPELQQAL QRQQEK FAR+KELAYICQ IKNPLSG+ FTNSLLE
Sbjct: 840 QIIGAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGIKNPLSGIRFTNSLLED 899
Query: 905 TDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDG-SLEFEKAEFLLGSVINAVVSQVM 963
T LT++QKQ LETS+ACEKQM +II D+DLESIED SLE EK EFLLG+VINAVVSQV+
Sbjct: 900 TGLTDEQKQFLETSSACEKQMSEIIHDIDLESIEDRYSLELEKGEFLLGNVINAVVSQVL 959
Query: 964 MLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTL 1023
+LLRERNLQLIRDIPEEIKTLAVYGDQ RIQQVL+DFLLN+VRY+PS +GWVEIHVRP +
Sbjct: 960 LLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPDGWVEIHVRPRI 1019
Query: 1024 KQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQ 1083
KQ S+G T++H EFRMVCPGEGLPPEL+QDMF++SRW TQEGLGLSM RKILKLMNGEVQ
Sbjct: 1020 KQISDGLTLLHAEFRMVCPGEGLPPELIQDMFNNSRWGTQEGLGLSMSRKILKLMNGEVQ 1079
Query: 1084 YIRESERCYFLIIFELPMPRRGSK 1107
YIRE+ERCYF ++ ELP+ RR SK
Sbjct: 1080 YIREAERCYFYVLLELPVTRRSSK 1103
>gi|240119391|dbj|BAH79244.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1805 bits (4675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 870/1136 (76%), Positives = 976/1136 (85%), Gaps = 40/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVS--KAIAQYTVDARLHAVFEQSGES 61
N H RR Q AQSSGT ++R N +S TVS KAI QYTVDARLHAVFEQSG S
Sbjct: 29 NILHTTHPRREQ--AQSSGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGS 86
Query: 62 GKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENA 119
GKSFDYSQS++T ++ SVPEQQI+AYLS+IQRGG IQPFGC IAVDE+TFR+I YSENA
Sbjct: 87 GKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENA 146
Query: 120 GEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNT 179
EMLGL PQSVP+LEK EIL +GTDVR+LF SSS+LLE+AF AR+IT+LNP+WIHSKNT
Sbjct: 147 REMLGLMPQSVPSLEKPEILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNT 206
Query: 180 GKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC 239
GKPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQSLPGGDIKLLC
Sbjct: 207 GKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLC 266
Query: 240 DTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFK 299
DTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFK
Sbjct: 267 DTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFK 326
Query: 300 QNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVII 359
QNRVRMIVDCHATP+ ++QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVII
Sbjct: 327 QNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 386
Query: 360 NGNDEE---AVGGRSTTRLW--------------------------AFGLQLNMELQLAS 390
NGN+E+ A GGR++ +LW AFGLQLNMELQLA
Sbjct: 387 NGNEEDGSNAGGGRNSMKLWGLVVCHHTTSRCIPFPLRYACEFLMQAFGLQLNMELQLAL 446
Query: 391 QLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTET 450
Q+SEK VLR QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV PTE
Sbjct: 447 QMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEA 506
Query: 451 QIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHT 510
QIKDIV+WLL H DSTGLSTDSL +AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT
Sbjct: 507 QIKDIVDWLLANHADSTGLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHT 566
Query: 511 AKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDS 570
AKEIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDS
Sbjct: 567 AKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDS 626
Query: 571 FRDAEAS-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
F+++EA+ NSKAV A ++ QG DEL +VAREMVRLIETAT PIFAVD GC+N
Sbjct: 627 FKESEAAMNSKAVDGAVQPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCIN 686
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWNAK+AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+EDKNVE+KL+TF
Sbjct: 687 GWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSP 746
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
E + KAVF++VNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVH+PNPL
Sbjct: 747 ELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPL 806
Query: 747 IPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
IPPIFA+DENT C EWN A+EKLTG SRG++IGKMLVGEVFG+CCRLKGPDALT+FMI L
Sbjct: 807 IPPIFAADENTICLEWNAALEKLTGVSRGEVIGKMLVGEVFGNCCRLKGPDALTRFMIVL 866
Query: 807 HNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTV 866
HNA GGQ+TEKFPFP FDRNGK+VQALLTANKRV+++G+++GAFCFLQI SPELQQAL V
Sbjct: 867 HNAIGGQETEKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAV 926
Query: 867 QRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQML 926
QR+Q+ +CF + KELAYICQ IK+PLSG+ F NSLLEAT+L EDQKQ LETS +CEKQ+
Sbjct: 927 QRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQIS 986
Query: 927 KIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAV 986
+I+ D+DLESIEDGS E +AEF LGS+INA+VSQ M LLRER LQLIRDIPEEIK+ AV
Sbjct: 987 RIVGDMDLESIEDGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAV 1046
Query: 987 YGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGL 1046
YGDQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ+++G + EFRM CPGEGL
Sbjct: 1047 YGDQTRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQTADGLRAIRTEFRMACPGEGL 1105
Query: 1047 PPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
PPELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+P
Sbjct: 1106 PPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVP 1161
>gi|240119393|dbj|BAH79245.1| phytochrome B [Cardamine nipponica]
gi|240119395|dbj|BAH79246.1| phytochrome B [Cardamine nipponica]
gi|240119397|dbj|BAH79247.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1804 bits (4673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 870/1136 (76%), Positives = 976/1136 (85%), Gaps = 40/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVS--KAIAQYTVDARLHAVFEQSGES 61
N H RR Q AQSSGT ++R N +S TVS KAI QYTVDARLHAVFEQSG S
Sbjct: 29 NILHTTHPRREQ--AQSSGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGS 86
Query: 62 GKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENA 119
GKSFDYSQS++T ++ SVPEQQI+AYLS+IQRGG IQPFGC IAVDE+TFR+I YSENA
Sbjct: 87 GKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENA 146
Query: 120 GEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNT 179
EMLGL PQSVP+LEK EIL +GTDVR+LF SSS+LLE+AF AR+IT+LNP+WIHSKNT
Sbjct: 147 REMLGLMPQSVPSLEKPEILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNT 206
Query: 180 GKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC 239
GKPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQSLPGGDIKLLC
Sbjct: 207 GKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLC 266
Query: 240 DTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFK 299
DTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFK
Sbjct: 267 DTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFK 326
Query: 300 QNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVII 359
QNRVRMIVDCHATP+ ++QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVII
Sbjct: 327 QNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 386
Query: 360 NGNDEE---AVGGRSTTRLW--------------------------AFGLQLNMELQLAS 390
NGN+E+ A GGR++ +LW AFGLQLNMELQLA
Sbjct: 387 NGNEEDGSNAGGGRNSMKLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLAL 446
Query: 391 QLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTET 450
Q+SEK VLR QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV PTE
Sbjct: 447 QMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEA 506
Query: 451 QIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHT 510
QIKDIV+WLL H DSTGLSTDSL +AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT
Sbjct: 507 QIKDIVDWLLANHADSTGLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHT 566
Query: 511 AKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDS 570
AKEIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDS
Sbjct: 567 AKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDS 626
Query: 571 FRDAEAS-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
F+++EA+ NSKAV A ++ QG DEL +VAREMVRLIETAT PIFAVD GC+N
Sbjct: 627 FKESEAAMNSKAVDGAVQPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCIN 686
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWNAK+AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+EDKNVE+KL+TF
Sbjct: 687 GWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSP 746
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
E + KAVF++VNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVH+PNPL
Sbjct: 747 ELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPL 806
Query: 747 IPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
IPPIFA+DENT C EWN A+EKLTG SRG++IGKMLVGEVFG+CCRLKGPDALT+FMI L
Sbjct: 807 IPPIFAADENTICLEWNAALEKLTGVSRGEVIGKMLVGEVFGNCCRLKGPDALTRFMIVL 866
Query: 807 HNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTV 866
HNA GGQ+TEKFPFP FDRNGK+VQALLTANKRV+++G+++GAFCFLQI SPELQQAL V
Sbjct: 867 HNAIGGQETEKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAV 926
Query: 867 QRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQML 926
QR+Q+ +CF + KELAYICQ IK+PLSG+ F NSLLEAT+L EDQKQ LETS +CEKQ+
Sbjct: 927 QRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQIS 986
Query: 927 KIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAV 986
+I+ D+DLESIEDGS E +AEF LGS+INA+VSQ M LLRER LQLIRDIPEEIK+ AV
Sbjct: 987 RIVGDMDLESIEDGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAV 1046
Query: 987 YGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGL 1046
YGDQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ+++G + EFRM CPGEGL
Sbjct: 1047 YGDQTRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQTADGLRAIRTEFRMACPGEGL 1105
Query: 1047 PPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
PPELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+P
Sbjct: 1106 PPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVP 1161
>gi|240119403|dbj|BAH79250.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1804 bits (4672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 869/1136 (76%), Positives = 975/1136 (85%), Gaps = 40/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVS--KAIAQYTVDARLHAVFEQSGES 61
N H RR Q AQSSGT ++R N +S TVS KAI QYTVDARLHAVFEQSG S
Sbjct: 29 NILHTTHPRREQ--AQSSGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGS 86
Query: 62 GKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENA 119
GKSFDYSQS++T ++ SVPEQQI+AYLS+IQRGG IQPFGC IAVDE+TFR+I YSENA
Sbjct: 87 GKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENA 146
Query: 120 GEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNT 179
EMLGL PQSVP+LEK EIL +GTDVR+LF SSS+LLE+AF AR+IT+LNP+WIHSKNT
Sbjct: 147 REMLGLMPQSVPSLEKPEILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNT 206
Query: 180 GKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC 239
GKPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQSLPGGDIKLLC
Sbjct: 207 GKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLC 266
Query: 240 DTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFK 299
DTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFK
Sbjct: 267 DTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFK 326
Query: 300 QNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVII 359
QNRVRMIVDCHATP+ ++QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVII
Sbjct: 327 QNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 386
Query: 360 NGNDEE---AVGGRSTTRLW--------------------------AFGLQLNMELQLAS 390
NGN+E+ A GGR++ +LW AFGLQLNMELQLA
Sbjct: 387 NGNEEDGSNAGGGRNSMKLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLAL 446
Query: 391 QLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTET 450
Q+SEK VLR QTLLCDMLLRDSPAGIVTQSPSIMD VKCDGAA Y GKYYPLGV PTE
Sbjct: 447 QMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDFVKCDGAAFLYHGKYYPLGVAPTEA 506
Query: 451 QIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHT 510
QIKDIV+WLL H DSTGLSTDSL +AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT
Sbjct: 507 QIKDIVDWLLANHADSTGLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHT 566
Query: 511 AKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDS 570
AKEIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDS
Sbjct: 567 AKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDS 626
Query: 571 FRDAEAS-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
F+++EA+ NSKAV A ++ QG DEL +VAREMVRLIETAT PIFAVD GC+N
Sbjct: 627 FKESEAAMNSKAVDGAVQPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCIN 686
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWNAK+AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+EDKNVE+KL+TF
Sbjct: 687 GWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSP 746
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
E + KAVF++VNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVH+PNPL
Sbjct: 747 ELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPL 806
Query: 747 IPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
IPPIFA+DENT C EWN A+EKLTG SRG++IGKMLVGEVFG+CCRLKGPDALT+FMI L
Sbjct: 807 IPPIFAADENTICLEWNAALEKLTGVSRGEVIGKMLVGEVFGNCCRLKGPDALTRFMIVL 866
Query: 807 HNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTV 866
HNA GGQ+TEKFPFP FDRNGK+VQALLTANKRV+++G+++GAFCFLQI SPELQQAL V
Sbjct: 867 HNAIGGQETEKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAV 926
Query: 867 QRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQML 926
QR+Q+ +CF + KELAYICQ IK+PLSG+ F NSLLEAT+L EDQKQ LETS +CEKQ+
Sbjct: 927 QRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQIS 986
Query: 927 KIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAV 986
+I+ D+DLESIEDGS E +AEF LGS+INA+VSQ M LLRER LQLIRDIPEEIK+ AV
Sbjct: 987 RIVGDMDLESIEDGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAV 1046
Query: 987 YGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGL 1046
YGDQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ+++G + EFRM CPGEGL
Sbjct: 1047 YGDQTRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQTADGLRAIRTEFRMACPGEGL 1105
Query: 1047 PPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
PPELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+P
Sbjct: 1106 PPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVP 1161
>gi|240119399|dbj|BAH79248.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1803 bits (4671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 870/1136 (76%), Positives = 975/1136 (85%), Gaps = 40/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVS--KAIAQYTVDARLHAVFEQSGES 61
N H RR Q AQSSGT ++R N +S TVS KAI QYTVDARLHAVFEQSG S
Sbjct: 29 NILHTTHPRREQ--AQSSGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGS 86
Query: 62 GKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENA 119
GKSFDYSQS++T ++ SVPEQQI+AYLS+IQRGG IQPFGC IAVDE+TFR+I YSENA
Sbjct: 87 GKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENA 146
Query: 120 GEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNT 179
EMLGL PQSVP+LEK EIL +GTDVR+LF SSS+LLE+AF AR+IT+LNP+WIHSKNT
Sbjct: 147 REMLGLMPQSVPSLEKPEILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNT 206
Query: 180 GKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC 239
GKPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQSLPGGDIKLLC
Sbjct: 207 GKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLC 266
Query: 240 DTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFK 299
DTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFK
Sbjct: 267 DTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFK 326
Query: 300 QNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVII 359
QNRVRMIVDCHATP+ ++QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVII
Sbjct: 327 QNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 386
Query: 360 NGNDEE---AVGGRSTTRLW--------------------------AFGLQLNMELQLAS 390
NGN+E+ A GGR++ +LW AFGLQLNMELQLA
Sbjct: 387 NGNEEDGSNAGGGRNSMKLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLAL 446
Query: 391 QLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTET 450
Q+SEK VLR QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV PTE
Sbjct: 447 QMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEA 506
Query: 451 QIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHT 510
QIKDIV+WLL H DSTGLSTDSL +AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT
Sbjct: 507 QIKDIVDWLLANHADSTGLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHT 566
Query: 511 AKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDS 570
AKEIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDS
Sbjct: 567 AKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDS 626
Query: 571 FRDAEAS-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
F+++EA+ NSKAV A ++ QG DEL +VAREMVRLIETAT PIFAVD GC+N
Sbjct: 627 FKESEAAMNSKAVDGAVQPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCIN 686
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWNAK+AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+EDKNVE+KL+TF
Sbjct: 687 GWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSP 746
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
E + KAVF++VNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVH+PNPL
Sbjct: 747 ELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPL 806
Query: 747 IPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
IPPIFA+DENT C EWN A+EKLTG SRG++IGKMLVGEVFG+CCRLKGPDALT+FMI L
Sbjct: 807 IPPIFAADENTICLEWNAALEKLTGVSRGEVIGKMLVGEVFGNCCRLKGPDALTRFMIVL 866
Query: 807 HNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTV 866
HNA GGQ+TEKFPFP FDRNGK+VQALLTANKRV+++G+++GAFCFLQI SPELQQAL V
Sbjct: 867 HNAIGGQETEKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAV 926
Query: 867 QRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQML 926
QR+Q+ +CF + KELAYICQ IK+PLSG+ F NSLLEAT+L EDQKQ LETS +CEKQ+
Sbjct: 927 QRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQIS 986
Query: 927 KIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAV 986
+I+ D+DLESIEDGS E +AEF LGS+INA+VSQ M LLRER LQLIRDIPEEIK+ AV
Sbjct: 987 RIVGDMDLESIEDGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAV 1046
Query: 987 YGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGL 1046
YGDQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ+ +G + EFRM CPGEGL
Sbjct: 1047 YGDQTRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQTGDGLRAIRTEFRMACPGEGL 1105
Query: 1047 PPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
PPELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+P
Sbjct: 1106 PPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVP 1161
>gi|240119401|dbj|BAH79249.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1802 bits (4668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 869/1136 (76%), Positives = 976/1136 (85%), Gaps = 40/1136 (3%)
Query: 4 NSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVS--KAIAQYTVDARLHAVFEQSGES 61
N H RR Q AQSSGT ++R N +S TVS KAI QYTVDARLHAVFEQSG S
Sbjct: 29 NILHTTHPRREQ--AQSSGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGS 86
Query: 62 GKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENA 119
GKSFDYSQS++T ++ SVPEQQI+AYLS+IQRGG IQPFGC IAVDE+TFR+I YSENA
Sbjct: 87 GKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENA 146
Query: 120 GEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNT 179
EMLGL PQSVP+LEK EIL +GTDVR+LF SSS+LLE+AF AR+IT+LNP+WIHSKNT
Sbjct: 147 REMLGLMPQSVPSLEKPEILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNT 206
Query: 180 GKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC 239
GKPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQSLPGGDIKLLC
Sbjct: 207 GKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLC 266
Query: 240 DTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFK 299
DTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFK
Sbjct: 267 DTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFK 326
Query: 300 QNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVII 359
QNRVRMIVDCHATP+ ++QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVII
Sbjct: 327 QNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVII 386
Query: 360 NGNDEE---AVGGRSTTRLW--------------------------AFGLQLNMELQLAS 390
NGN+E+ A GGR++ +LW AFGLQLNMELQLA
Sbjct: 387 NGNEEDGSNAGGGRNSMKLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLAL 446
Query: 391 QLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTET 450
Q+SEK VLR QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV PTE
Sbjct: 447 QMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEA 506
Query: 451 QIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHT 510
QIKDIV+WLL H DSTGLSTDSL +AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT
Sbjct: 507 QIKDIVDWLLANHADSTGLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHT 566
Query: 511 AKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDS 570
AKEIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDS
Sbjct: 567 AKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDS 626
Query: 571 FRDAEAS-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
F+++EA+ NSKAV A ++ QG DEL +VAREMVRLIETAT PIFAVD GC+N
Sbjct: 627 FKESEAAMNSKAVDGAVQPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCIN 686
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWNAK+AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+EDKNVE+KL+TF
Sbjct: 687 GWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSP 746
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
E + KAVF++VNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVH+PNPL
Sbjct: 747 ELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPL 806
Query: 747 IPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
IPPIFA+D+NT C EWN A+EKLTG SRG++IGKMLVGEVFG+CCRLKGPDALT+FMI L
Sbjct: 807 IPPIFAADDNTICLEWNAALEKLTGVSRGEVIGKMLVGEVFGNCCRLKGPDALTRFMIVL 866
Query: 807 HNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTV 866
HNA GGQ+TEKFPFP FDRNGK+VQALLTANKRV+++G+++GAFCFLQI SPELQQAL V
Sbjct: 867 HNAIGGQETEKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAV 926
Query: 867 QRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQML 926
QR+Q+ +CF + KELAYICQ IK+PLSG+ F NSLLEAT+L EDQKQ LETS +CEKQ+
Sbjct: 927 QRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQIS 986
Query: 927 KIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAV 986
+I+ D+DLESIEDGS E +AEF LGS+INA+VSQ M LLRER LQLIRDIPEEIK+ AV
Sbjct: 987 RIVGDMDLESIEDGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAV 1046
Query: 987 YGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGL 1046
YGDQ RIQQ+LA+FLL+++RY+PS E WVEIH+ KQ+++G + EFRM CPGEGL
Sbjct: 1047 YGDQTRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQVSKQTADGLRAIRTEFRMACPGEGL 1105
Query: 1047 PPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
PPELV+DMFHSSRW + EGLGLS+CRKILKLMNGEVQYIRESER YFLII ELP+P
Sbjct: 1106 PPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVP 1161
>gi|255642598|gb|ACU21558.1| phytochrome B [Medicago sativa]
Length = 1061
Score = 1793 bits (4644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1061 (79%), Positives = 948/1061 (89%), Gaps = 35/1061 (3%)
Query: 79 PEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEI 138
PEQQI+AYL+KIQRGG IQPFG IAVDE +FRV+AY+ENA +MLG+ PQSVP+LE +
Sbjct: 1 PEQQITAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAYNENARDMLGITPQSVPSLEDDDE 60
Query: 139 -----LTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
IGTDVR+LFT SS VLLEKAF AREI+L+NPIWIHS++TGKPFY ILHR+DVG
Sbjct: 61 SSSSGFNIGTDVRSLFTHSSGVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDVG 120
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
+VIDLEPAR+EDPALSIAGAVQSQKLAVRAISQLQSLPGGD+K+LCD VVESVR+LTGYD
Sbjct: 121 VVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYD 180
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDC+A+P
Sbjct: 181 RVMVYKFHEDEHGEVVAESKRIDLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCNASP 240
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG----G 369
+ V QDE L+QP+CLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGNDE+ VG G
Sbjct: 241 VRVFQDEALVQPVCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTG 300
Query: 370 RSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVLRTQTL 403
R++ RLW AFGLQLNMELQLA+Q SEK VLRTQTL
Sbjct: 301 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSSEKRVLRTQTL 360
Query: 404 LCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYH 463
LCDMLLRDSP GIVTQSPSIMDLVKCDGAAL+YQG YYPLGVTPTE+QI+DI+EWLL +H
Sbjct: 361 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFH 420
Query: 464 GDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHP 523
GDSTGLSTDSLADAGYP AA+LGDAVCGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHP
Sbjct: 421 GDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHP 480
Query: 524 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVV 583
EDKDDGQRMHPRSSFKAFLEVVKSRS+ WDNAEMDAIHSLQLILRDSF++AE ++SKAVV
Sbjct: 481 EDKDDGQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVV 540
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+ + +LELQGVDELSSVAREMVRLIETATAPIFAVDV+G +NGWNAKV+ELTGL VE+A
Sbjct: 541 HTHMAELELQGVDELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDA 600
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
MGKSL+HDLVYKE +E VD LL HALKGEEDKNVEIK+RTFG N+ KAVF+VVNACSSK
Sbjct: 601 MGKSLLHDLVYKESQETVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSK 660
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
DYTNNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPN LIPPIFASD+NTCC EWN
Sbjct: 661 DYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWN 720
Query: 764 TAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLF 823
AMEKL+GWSR D+IGK+LVGEVFGS C+LKG DA+TKFMI LHNA GGQDT++FPF
Sbjct: 721 NAMEKLSGWSRTDVIGKLLVGEVFGSFCQLKGSDAMTKFMIVLHNALGGQDTDEFPFSFV 780
Query: 824 DRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAY 883
DR+GKYVQ LTANKRVN++GQI+GAFCFLQI SPELQQALTVQRQQ+ CFAR+KELAY
Sbjct: 781 DRHGKYVQTFLTANKRVNIDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAY 840
Query: 884 ICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLE 943
ICQE+KNPLSG+ FTNSLLE+T LT++QKQLLETSAACEKQMLKII+D+DL+SI+DGSL
Sbjct: 841 ICQEVKNPLSGIRFTNSLLESTCLTDEQKQLLETSAACEKQMLKIIRDIDLDSIDDGSLA 900
Query: 944 FEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLN 1003
EK EFLL +VINAVVSQVM+LLRERNLQLIRDIPEEIKTLAVYGDQ R QQ LADFL+N
Sbjct: 901 LEKQEFLLENVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRFQQALADFLMN 960
Query: 1004 MVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQ 1063
+VRY+PS +GWVEIHV P +KQ S+G T++H EFRMVCPGEGLPPEL+QDMFH+S+W+TQ
Sbjct: 961 VVRYAPSPDGWVEIHVFPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFHNSKWVTQ 1020
Query: 1064 EGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
EGLGLSM RKI+KLMNGEVQY+RE+ERCYFL++ ELP+ RR
Sbjct: 1021 EGLGLSMSRKIIKLMNGEVQYVREAERCYFLVVLELPVTRR 1061
>gi|5757903|gb|AAD50631.1|AF122901_1 phytochrome B2 [Solanum lycopersicum]
Length = 1121
Score = 1790 bits (4635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 862/1130 (76%), Positives = 974/1130 (86%), Gaps = 41/1130 (3%)
Query: 1 MASNSQHQQQHRRS---QSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQ 57
MAS S + +H R+ ++ +Q SGTSN A +SKA+AQYT DARLHA FEQ
Sbjct: 1 MASGSGSRGKHDRNHQPKNQSQFSGTSNTNA---------LSKAVAQYTTDARLHAAFEQ 51
Query: 58 SGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSE 117
SGESGK+FDYSQSVR + SV E QI+AYL+K+QRGGHIQPFGCTIAV+EA+F VIAYSE
Sbjct: 52 SGESGKNFDYSQSVRNSTESVTEHQITAYLNKMQRGGHIQPFGCTIAVEEASFCVIAYSE 111
Query: 118 NAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSK 177
NA EML + PQSVP+LEK EIL IGTDVRTLF+SSSS LLE AFGAREITLLNPIW+HSK
Sbjct: 112 NACEMLDIMPQSVPSLEKNEILKIGTDVRTLFSSSSSGLLEGAFGAREITLLNPIWVHSK 171
Query: 178 NTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKL 237
N+GKPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDI L
Sbjct: 172 NSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISLLQSLPGGDIDL 231
Query: 238 LCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFL 297
LCDTVV+SVR+LTGYDRVMVY+FH+DEHGEVVAES+R DLEPY GLHYPATDIPQASRFL
Sbjct: 232 LCDTVVKSVRELTGYDRVMVYKFHDDEHGEVVAESRRSDLEPYIGLHYPATDIPQASRFL 291
Query: 298 FKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAV 357
FKQNRVRMIVDC A P+ VIQDE LMQPLCLVGSTLRAPHGCH QYM NMG++ASL LAV
Sbjct: 292 FKQNRVRMIVDCTAIPVRVIQDESLMQPLCLVGSTLRAPHGCHPQYMVNMGNVASLTLAV 351
Query: 358 IINGNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLASQ 391
+INGND+E VGGR+ RLW AFGLQLNMELQLASQ
Sbjct: 352 VINGNDDEVVGGRNAMRLWGLVVGHHSSARFIPFPLRYACEFLMQAFGLQLNMELQLASQ 411
Query: 392 LSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQ 451
L+EK VLRTQT+LCDMLLRDSP GIVTQ+PSI+DLVKCDGAALYYQG+YYPLG+TPT Q
Sbjct: 412 LAEKRVLRTQTVLCDMLLRDSPTGIVTQNPSIVDLVKCDGAALYYQGRYYPLGITPTAAQ 471
Query: 452 IKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTA 511
IK IVEWLLT H DSTGLSTDSLADAGYP+AA+LG AVCGMAVAY+T + FLFWFRSHTA
Sbjct: 472 IKGIVEWLLTCHVDSTGLSTDSLADAGYPEAASLGAAVCGMAVAYVTSKYFLFWFRSHTA 531
Query: 512 KEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSF 571
EIKWGGAKHHPEDKDD Q+MHPRSSFKAFLEVVK+RSLPW+NAEMDAIHSLQLILRDSF
Sbjct: 532 SEIKWGGAKHHPEDKDDWQKMHPRSSFKAFLEVVKNRSLPWENAEMDAIHSLQLILRDSF 591
Query: 572 RDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAK 631
+D ASNSK++V QL + LQG+DEL SVAREMVRL+ETATAPIFAVDV G +N WNAK
Sbjct: 592 KD--ASNSKSIVRVQLREEGLQGMDELRSVAREMVRLVETATAPIFAVDVEGRINAWNAK 649
Query: 632 VAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKK 691
VAELT LSVEEA+GKSLVHDLV++E + NLL AL+GEEDKN+EIKLRTFGAE KK
Sbjct: 650 VAELTELSVEEAIGKSLVHDLVHEESQTTAQNLLRKALRGEEDKNIEIKLRTFGAEQLKK 709
Query: 692 AVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIF 751
VFV VNACS+KDYTNNIVGV F+GQD+T QK+V+DKF+ IQGDYKAI+HSPNPLIPPIF
Sbjct: 710 TVFVEVNACSNKDYTNNIVGVSFIGQDITAQKVVLDKFVRIQGDYKAIMHSPNPLIPPIF 769
Query: 752 ASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFG 811
SDENTCC EWNTAMEKL+GW++ +IIGKMLVGE+FG+ CRLKGPD +T FMI LH A G
Sbjct: 770 VSDENTCCFEWNTAMEKLSGWNKEEIIGKMLVGEIFGTFCRLKGPDDMTNFMIMLHKAIG 829
Query: 812 GQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQE 871
GQ+ +KFPF DRNGK+VQALLTANKRVN++GQI+GAFCFLQIASPELQ+ L +QRQQE
Sbjct: 830 GQEIDKFPFSFSDRNGKFVQALLTANKRVNVDGQIIGAFCFLQIASPELQKTL-MQRQQE 888
Query: 872 KKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKD 931
K +KELAYIC+E+KNPL+G+ FTNSLLEAT+LTE+QKQ LETSAACE+QM KII+D
Sbjct: 889 KTSNIHMKELAYICRELKNPLNGIRFTNSLLEATELTENQKQFLETSAACERQMSKIIRD 948
Query: 932 VDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQA 991
+DL++IEDGSLE EK EF L SVI+AVVSQVM+LLRER +QLIRDIP+EIKTL VYGDQ
Sbjct: 949 IDLDNIEDGSLELEKGEFFLASVIDAVVSQVMLLLRERGVQLIRDIPDEIKTLRVYGDQV 1008
Query: 992 RIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELV 1051
RIQQV ADFL M Y+P EGWVE+H+RP++KQ S+G TIVH EFR+VCPGEGLPPEL+
Sbjct: 1009 RIQQVFADFLQIMASYAPPREGWVEVHLRPSIKQISDGVTIVHIEFRIVCPGEGLPPELI 1068
Query: 1052 QDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
QDMFH+S W+TQ+GLGLSMCR+IL+LMNG+VQYIRESERC+FLII +LPM
Sbjct: 1069 QDMFHNSLWVTQQGLGLSMCRRILQLMNGQVQYIRESERCFFLIILQLPM 1118
>gi|388458330|gb|AFK31031.1| phytochrome b, partial [Oryza rufipogon]
gi|388458368|gb|AFK31050.1| phytochrome b, partial [Oryza rufipogon]
gi|388458370|gb|AFK31051.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1756 bits (4549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/1155 (73%), Positives = 960/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458276|gb|AFK31004.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1756 bits (4549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/1155 (73%), Positives = 960/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|122247122|sp|Q10MG9.1|PHYB_ORYSJ RecName: Full=Phytochrome B
gi|30578178|dbj|BAC76432.1| phytochrome B [Oryza sativa Japonica Group]
gi|57506674|dbj|BAD86669.1| phytochrome B [Oryza sativa Japonica Group]
gi|108707763|gb|ABF95558.1| Phytochrome B, putative, expressed [Oryza sativa Japonica Group]
gi|388458242|gb|AFK30987.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458278|gb|AFK31005.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458280|gb|AFK31006.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458284|gb|AFK31008.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1756 bits (4547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/1155 (73%), Positives = 960/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|158513196|sp|A2XFW2.2|PHYB_ORYSI RecName: Full=Phytochrome B
Length = 1171
Score = 1756 bits (4547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/1155 (73%), Positives = 960/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 PFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|357112543|ref|XP_003558068.1| PREDICTED: phytochrome B-like [Brachypodium distachyon]
Length = 1181
Score = 1755 bits (4546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 837/1105 (75%), Positives = 947/1105 (85%), Gaps = 40/1105 (3%)
Query: 38 VSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQ 97
VSKA+AQYT+DA LHAVFEQSG SG+SFDYSQS+ + EQQI+AYLS+IQRGGHIQ
Sbjct: 68 VSKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPSTSSEQQIAAYLSRIQRGGHIQ 127
Query: 98 PFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSS 152
PFGCT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+
Sbjct: 128 PFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADSRLLFSPP 187
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAG
Sbjct: 188 SGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 247
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQSQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVY+FH+DEHGEV+AES
Sbjct: 248 AVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAES 307
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R DLEPY GLHYPATDIPQASRFLF+QNRVRMI DCHA P+ VIQD + QPLCLVGST
Sbjct: 308 RRTDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPAMPQPLCLVGST 367
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGR----STTRLW----------- 376
LR+PHGCHAQYMANMGSIASL +AVII+ G ++E GR S +LW
Sbjct: 368 LRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMGRGAIPSAMKLWGLVVCHHTSPR 427
Query: 377 ---------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSP 421
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSP
Sbjct: 428 CIPFPLRYACEFLMQAFGLQLNMELQLAYQLSEKHILRTQTLLCDMLLRDSPTGIVTQSP 487
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
SIMDLVKCDGAALYY GKYYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY
Sbjct: 488 SIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTVCHGDSTGLSTDSLADAGYSG 547
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
A LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF
Sbjct: 548 ATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 607
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDE 597
LEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+V+ Q L +LEL+G+DE
Sbjct: 608 LEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAREGTSNSKAIVDGQVQLGELELRGIDE 667
Query: 598 LSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEY 657
LSSVAREMVRLIETAT PIFAVD GC+NGWNAKVAELTGL+VEEAMGKSLV DL++KE
Sbjct: 668 LSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLTVEEAMGKSLVTDLIFKES 727
Query: 658 EEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQ 717
EEIV+ LL AL+GEEDKNVEIKL+TFG E K A+FV+VNACSS+DYT NIVGVCFVGQ
Sbjct: 728 EEIVEKLLSQALRGEEDKNVEIKLKTFGPEQSKGAIFVIVNACSSRDYTKNIVGVCFVGQ 787
Query: 718 DVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDI 777
D+T QK+VMDKF++IQGDYKAIVH+PNPLIPPIFASDEN CCSEWNTAMEKLTGWSRG++
Sbjct: 788 DITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMEKLTGWSRGEV 847
Query: 778 IGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
IGK+LVGEVFG+CCRLKGPDALTKFMIALHNA GGQD+EK PF FD+NGKYVQALLTAN
Sbjct: 848 IGKLLVGEVFGNCCRLKGPDALTKFMIALHNAIGGQDSEKLPFSFFDKNGKYVQALLTAN 907
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
R M+G+ +GAFCFLQIASPELQQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+ F
Sbjct: 908 TRSKMDGEAIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRF 967
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
TNSLLE TDL +DQ+Q LETS ACEKQM KI+KD L+ IEDGSL EK EF LG+V+NA
Sbjct: 968 TNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQRIEDGSLVLEKGEFSLGNVMNA 1027
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
VVSQVM+LLRER+LQLIRDIP+EIK + YGDQ RIQQVL+DFLL+MVR++P+ GWVEI
Sbjct: 1028 VVSQVMILLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSDFLLSMVRFAPTENGWVEI 1087
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKL 1077
VRP +KQ+S+G + FR CPGEGLPP++VQDMF +SRW TQEG+GLS+CRKILKL
Sbjct: 1088 QVRPNVKQNSDGTETMLFLFRFACPGEGLPPDIVQDMFSNSRWTTQEGIGLSVCRKILKL 1147
Query: 1078 MNGEVQYIRESERCYFLIIFELPMP 1102
M GEVQYIRESER +FLI+ ELP P
Sbjct: 1148 MGGEVQYIRESERSFFLIVLELPQP 1172
>gi|388458324|gb|AFK31028.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1755 bits (4545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 959/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQ SRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQTSRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458232|gb|AFK30982.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1755 bits (4545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1151 (73%), Positives = 959/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L ++P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDVSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458282|gb|AFK31007.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1754 bits (4543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/1155 (73%), Positives = 960/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAIKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458350|gb|AFK31041.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1754 bits (4543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 960/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMA+MGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMADMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSVPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLPRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458230|gb|AFK30981.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458288|gb|AFK31010.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458292|gb|AFK31012.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458294|gb|AFK31013.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458296|gb|AFK31014.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458300|gb|AFK31016.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458306|gb|AFK31019.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458364|gb|AFK31048.1| phytochrome b, partial [Oryza rufipogon]
gi|388458372|gb|AFK31052.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1754 bits (4542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 959/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458248|gb|AFK30990.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458250|gb|AFK30991.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1753 bits (4541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 959/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+V DMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458244|gb|AFK30988.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1753 bits (4541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 959/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+L +L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLHAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|39777267|gb|AAR30903.1| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1753 bits (4541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 840/1105 (76%), Positives = 947/1105 (85%), Gaps = 38/1105 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DARLHAVFEQSG SG+SFDYSQS+R EQQI+AYLS+IQRGGHI
Sbjct: 66 SVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHI 125
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIGTDVRTLFTSS 152
QPFGCT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQSQKLAVRAIS+LQ+LPGGDIKLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHATP+ VIQD G+ QPLCLVGST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGG---RSTTRLW------------ 376
LRAPHGCHAQYMANMGSIASL +AVII+ G D+E G S +LW
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRC 425
Query: 377 --------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPS
Sbjct: 426 IPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPS 485
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAALYY GKYYPLGVTPTE+QIKDI+EWL HGDSTGLSTDSLADAGY A
Sbjct: 486 IMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGA 545
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
A LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL
Sbjct: 546 AALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 605
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDEL 598
EVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G++EL
Sbjct: 606 EVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINEL 665
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV+DL++KE E
Sbjct: 666 SSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESE 725
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
EIV+ LL AL+GEEDKNVEIKL+TFG+E A+FV+VNACSS+DYT NIVGVCFVGQD
Sbjct: 726 EIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQD 785
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
VT QK+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENT CSEWNTAMEKLTGWSRG+++
Sbjct: 786 VTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVV 845
Query: 779 GKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
GK L+GEVFGS CRLKGPDALTKFM+ +HNA GGQD EKFPF FD+NGKYVQALLTAN
Sbjct: 846 GKFLIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANT 905
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
R M+G+ +GAFCFLQIAS E+QQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+ FT
Sbjct: 906 RSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFT 965
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
NSLL+ TDL +DQ+Q LET +ACEKQM KI+KD L+SIEDGSL EK+EF G V+NAV
Sbjct: 966 NSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDTTLQSIEDGSLVLEKSEFSFGDVMNAV 1025
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
VSQ M+LLRER+LQLIRDIP+EIK + YGDQ RIQQVLADFLL+MVR +PS GWVEI
Sbjct: 1026 VSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPSENGWVEIQ 1085
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
VRP +KQ+S+G FR CPGEGLP ++VQDMF +S+W TQEG+GLS CRKILKLM
Sbjct: 1086 VRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLM 1145
Query: 1079 NGEVQYIRESERCYFLIIFELPMPR 1103
GEVQYIRESER +FLI+ ELP PR
Sbjct: 1146 GGEVQYIRESERSFFLIVLELPQPR 1170
>gi|388458264|gb|AFK30998.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1753 bits (4541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1151 (73%), Positives = 957/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRLPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+V DMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458318|gb|AFK31025.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1753 bits (4541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 959/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRRIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|293335473|ref|NP_001169810.1| uncharacterized protein LOC100383702 [Zea mays]
gi|37926866|gb|AAP06788.1| phytochrome B1 apoprotein [Zea mays]
Length = 1161
Score = 1753 bits (4541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/1115 (75%), Positives = 952/1115 (85%), Gaps = 38/1115 (3%)
Query: 27 RAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAY 86
RA A + +VSKA+AQYT+DARLHAVFEQSG SG+SFDYSQS+R EQQI+AY
Sbjct: 39 RAGGGAAATESVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAY 98
Query: 87 LSKIQRGGHIQPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIG 142
LS+IQRGGHIQPFGCT+AV D+++FR++A+SEN+ ++L L+P SVP+L+ +++G
Sbjct: 99 LSRIQRGGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPHVSLG 158
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
D R LF+ SS+VLLE+AF AREI+LLNPIWIHS+ + KPFYAILHR+DVG+VIDLEPAR
Sbjct: 159 ADARLLFSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDLEPAR 218
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
TEDPALSIAGAVQSQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVYRFHE
Sbjct: 219 TEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHE 278
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAES+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHATP+ VIQD GL
Sbjct: 279 DEHGEVVAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGL 338
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGG---RSTTRLW-- 376
QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVII+ G D+E G S +LW
Sbjct: 339 SQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGL 398
Query: 377 ------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 412
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDS
Sbjct: 399 VVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDS 458
Query: 413 PAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTD 472
P GIVTQSPSIMDLVKCDGAALYY GKYYPLGVTPTE+QIKDI+EWL +HGDSTGLSTD
Sbjct: 459 PTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHGDSTGLSTD 518
Query: 473 SLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 532
SLADAGY AA LG+AVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRM
Sbjct: 519 SLADAGYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 578
Query: 533 HPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LV 588
HPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA +NSKA+VN Q L
Sbjct: 579 HPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAIVNGQVQLR 638
Query: 589 DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSL 648
+LEL+G++ELSSVAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSL
Sbjct: 639 ELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSL 698
Query: 649 VHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNN 708
V+DL++KE E V+ LL AL+GEEDKNVEIKL+TFG+E K +FVVVNACSS+DYT N
Sbjct: 699 VNDLIFKESEATVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGPIFVVVNACSSRDYTQN 758
Query: 709 IVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEK 768
IVGVCFVGQDVT QK+VMDKF++IQGDYKAIVH+PNPLIPPIFASDENT CSEWNTAMEK
Sbjct: 759 IVGVCFVGQDVTGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEK 818
Query: 769 LTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGK 828
LTGWSRG+++GK L+GEVFG+CCRLKGPDALTKFM+ +HNA GGQD EKFPF FD+NGK
Sbjct: 819 LTGWSRGEVVGKFLIGEVFGNCCRLKGPDALTKFMVIIHNAIGGQDYEKFPFSFFDKNGK 878
Query: 829 YVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEI 888
YVQALLTAN R M+G+ +GAFCFLQIAS E+QQA +QRQQEKKC+AR+KELAYICQEI
Sbjct: 879 YVQALLTANTRSKMDGKSIGAFCFLQIASTEIQQAFEIQRQQEKKCYARMKELAYICQEI 938
Query: 889 KNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAE 948
KNPLSG+ FTNSLL+ TDL +DQ+Q LETS+ACEKQM KI+KD L+SIEDGSL E++E
Sbjct: 939 KNPLSGIRFTNSLLQMTDLNDDQRQFLETSSACEKQMSKIVKDASLQSIEDGSLVLEQSE 998
Query: 949 FLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYS 1008
F LG V+NAVVSQ M+LLRER+LQLIRDIP+EIK + YGDQ RIQQVLADFLL+MVR +
Sbjct: 999 FSLGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQCRIQQVLADFLLSMVRSA 1058
Query: 1009 PSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGL 1068
PS GWVEI VRP +KQ+S+G FR CPGEGLP ++VQDMF +S+W TQEG+GL
Sbjct: 1059 PSENGWVEIQVRPNVKQNSDGTNTELFIFRFACPGEGLPADVVQDMFSNSQWSTQEGVGL 1118
Query: 1069 SMCRKILKLMNGEVQYIRESERCYFLIIFELPMPR 1103
S CRKILKLM GEVQYIRESER +FLI+ E P PR
Sbjct: 1119 STCRKILKLMGGEVQYIRESERSFFLIVLEQPQPR 1153
>gi|388458304|gb|AFK31018.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1753 bits (4540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1151 (73%), Positives = 958/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGA+QSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAIQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458362|gb|AFK31047.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1753 bits (4540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1151 (73%), Positives = 958/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQS SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSDASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458236|gb|AFK30984.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458286|gb|AFK31009.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458310|gb|AFK31021.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1753 bits (4540), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 959/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458346|gb|AFK31039.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1753 bits (4539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ V QD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVTQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K + V+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPILVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|414866482|tpg|DAA45039.1| TPA: phytochromeB1 [Zea mays]
Length = 1161
Score = 1753 bits (4539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/1115 (75%), Positives = 952/1115 (85%), Gaps = 38/1115 (3%)
Query: 27 RAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAY 86
RA A + +VSKA+AQYT+DARLHAVFEQSG SG+SFDYSQS+R EQQI+AY
Sbjct: 39 RAGGGAAATESVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAY 98
Query: 87 LSKIQRGGHIQPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIG 142
LS+IQRGGHIQPFGCT+AV D+++FR++A+SEN+ ++L L+P SVP+L+ +++G
Sbjct: 99 LSRIQRGGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPHVSLG 158
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
D R LF+ SS+VLLE+AF AREI+LLNPIWIHS+ + KPFYAILHR+DVG+VIDLEPAR
Sbjct: 159 ADARLLFSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDLEPAR 218
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
TEDPALSIAGAVQSQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVYRFHE
Sbjct: 219 TEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHE 278
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAES+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHATP+ VIQD GL
Sbjct: 279 DEHGEVVAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGL 338
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGG---RSTTRLW-- 376
QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVII+ G D+E G S +LW
Sbjct: 339 SQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGL 398
Query: 377 ------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 412
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDS
Sbjct: 399 VVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDS 458
Query: 413 PAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTD 472
P GIVTQSPSIMDLVKCDGAALYY GKYYPLGVTPTE+QIKDI+EWL +HGDSTGLSTD
Sbjct: 459 PTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHGDSTGLSTD 518
Query: 473 SLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 532
SLADAGY AA LG+AVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRM
Sbjct: 519 SLADAGYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 578
Query: 533 HPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LV 588
HPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA +NSKA+VN Q L
Sbjct: 579 HPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAIVNGQVQLR 638
Query: 589 DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSL 648
+LEL+G++ELSSVAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSL
Sbjct: 639 ELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSL 698
Query: 649 VHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNN 708
V+DL++KE E V+ LL AL+GEEDKNVEIKL+TFG+E K +FVVVNACSS+DYT N
Sbjct: 699 VNDLIFKESEATVEKLLSRALRGEEDKNVEIKLKTFGSEQYKGPIFVVVNACSSRDYTQN 758
Query: 709 IVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEK 768
IVGVCFVGQDVT QK+VMDKF++IQGDYKAIVH+PNPLIPPIFASDENT CSEWNTAMEK
Sbjct: 759 IVGVCFVGQDVTGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEK 818
Query: 769 LTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGK 828
LTGWSRG+++GK L+GEVFG+CCRLKGPDALTKFM+ +HNA GGQD EKFPF FD+NGK
Sbjct: 819 LTGWSRGEVVGKFLIGEVFGNCCRLKGPDALTKFMVIIHNAIGGQDYEKFPFSFFDKNGK 878
Query: 829 YVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEI 888
YVQALLTAN R M+G+ +GAFCFLQIAS E+QQA +QRQQEKKC+AR+KELAYICQEI
Sbjct: 879 YVQALLTANTRSKMDGKSIGAFCFLQIASTEIQQAFEIQRQQEKKCYARMKELAYICQEI 938
Query: 889 KNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAE 948
KNPLSG+ FTNSLL+ TDL +DQ+Q LETS+ACEKQM KI+KD L+SIEDGSL E++E
Sbjct: 939 KNPLSGIRFTNSLLQMTDLNDDQRQFLETSSACEKQMSKIVKDASLQSIEDGSLVLEQSE 998
Query: 949 FLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYS 1008
F LG V+NAVVSQ M+LLRER+LQLIRDIP+EIK + YGDQ RIQQVLADFLL+MVR +
Sbjct: 999 FSLGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQCRIQQVLADFLLSMVRSA 1058
Query: 1009 PSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGL 1068
PS GWVEI VRP +KQ+S+G FR CPGEGLP ++VQDMF +S+W TQEG+GL
Sbjct: 1059 PSENGWVEIQVRPNVKQNSDGTNTELFIFRFACPGEGLPADVVQDMFSNSQWSTQEGVGL 1118
Query: 1069 SMCRKILKLMNGEVQYIRESERCYFLIIFELPMPR 1103
S CRKILKLM GEVQYIRESER +FLI+ E P PR
Sbjct: 1119 STCRKILKLMGGEVQYIRESERSFFLIVLEQPQPR 1153
>gi|388458262|gb|AFK30997.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1753 bits (4539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + ++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPASLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+V DMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|39777291|gb|AAR30915.1| phytochrome B [Sorghum bicolor subsp. x drummondii]
Length = 1177
Score = 1753 bits (4539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 840/1105 (76%), Positives = 947/1105 (85%), Gaps = 38/1105 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DARLHAVFEQSG SG+SFDYSQS+R EQQI+AYLS+IQRGGHI
Sbjct: 65 SVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHI 124
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIGTDVRTLFTSS 152
QPFGCT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+ S
Sbjct: 125 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 184
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAG
Sbjct: 185 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 244
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQSQKLAVRAIS+LQ+LPGGDIKLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES
Sbjct: 245 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 304
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHATP+ VIQD G+ QPLCLVGST
Sbjct: 305 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 364
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGG---RSTTRLW------------ 376
LRAPHGCHAQYMANMGSIASL +AVII+ G D+E G S +LW
Sbjct: 365 LRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRC 424
Query: 377 --------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPS
Sbjct: 425 IPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPS 484
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAALYY GKYYPLGVTPTE+QIKDI+EWL HGDSTGLSTDSLADAGY A
Sbjct: 485 IMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGA 544
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
A LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL
Sbjct: 545 AALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 604
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDEL 598
EVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G++EL
Sbjct: 605 EVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINEL 664
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV+DL++KE E
Sbjct: 665 SSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESE 724
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
EIV+ LL AL+GEEDKNVEIKL+TFG+E A+FV+VNACSS+DYT NIVGVCFVGQD
Sbjct: 725 EIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQD 784
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
VT QK+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENT CSEWNTAMEKLTGWSRG+++
Sbjct: 785 VTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVV 844
Query: 779 GKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
GK L+GEVFGS CRLKGPDALTKFM+ +HNA GGQD EKFPF FD+NGKYVQALLTAN
Sbjct: 845 GKFLIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANT 904
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
R M+G+ +GAFCFLQIAS E+QQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+ FT
Sbjct: 905 RSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFT 964
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
NSLL+ TDL +DQ+Q LET +ACEKQM KI+KD L+SIEDGSL EK+EF G V+NAV
Sbjct: 965 NSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFSFGDVMNAV 1024
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
VSQ M+LLRER+LQLIRDIP+EIK + YGDQ RIQQVLADFLL+MVR +PS GWVEI
Sbjct: 1025 VSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPSENGWVEIQ 1084
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
VRP +KQ+S+G FR CPGEGLP ++VQDMF +S+W TQEG+GLS CRKILKLM
Sbjct: 1085 VRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLM 1144
Query: 1079 NGEVQYIRESERCYFLIIFELPMPR 1103
GEVQYIRESER +FLI+ ELP PR
Sbjct: 1145 GGEVQYIRESERSFFLIVLELPQPR 1169
>gi|242041157|ref|XP_002467973.1| hypothetical protein SORBIDRAFT_01g037340 [Sorghum bicolor]
gi|39777261|gb|AAR30900.1| phytochrome B [Sorghum bicolor]
gi|39777263|gb|AAR30901.1| phytochrome B [Sorghum bicolor]
gi|39777265|gb|AAR30902.1| phytochrome B [Sorghum bicolor]
gi|39777269|gb|AAR30904.1| phytochrome B [Sorghum bicolor]
gi|39777275|gb|AAR30907.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777277|gb|AAR30908.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777279|gb|AAR30909.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777281|gb|AAR30910.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777283|gb|AAR30911.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777285|gb|AAR30912.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777287|gb|AAR30913.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|241921827|gb|EER94971.1| hypothetical protein SORBIDRAFT_01g037340 [Sorghum bicolor]
Length = 1178
Score = 1753 bits (4539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 840/1105 (76%), Positives = 947/1105 (85%), Gaps = 38/1105 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DARLHAVFEQSG SG+SFDYSQS+R EQQI+AYLS+IQRGGHI
Sbjct: 66 SVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHI 125
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIGTDVRTLFTSS 152
QPFGCT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQSQKLAVRAIS+LQ+LPGGDIKLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHATP+ VIQD G+ QPLCLVGST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGG---RSTTRLW------------ 376
LRAPHGCHAQYMANMGSIASL +AVII+ G D+E G S +LW
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRC 425
Query: 377 --------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPS
Sbjct: 426 IPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPS 485
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAALYY GKYYPLGVTPTE+QIKDI+EWL HGDSTGLSTDSLADAGY A
Sbjct: 486 IMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGA 545
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
A LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL
Sbjct: 546 AALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 605
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDEL 598
EVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G++EL
Sbjct: 606 EVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINEL 665
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV+DL++KE E
Sbjct: 666 SSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESE 725
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
EIV+ LL AL+GEEDKNVEIKL+TFG+E A+FV+VNACSS+DYT NIVGVCFVGQD
Sbjct: 726 EIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQD 785
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
VT QK+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENT CSEWNTAMEKLTGWSRG+++
Sbjct: 786 VTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVV 845
Query: 779 GKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
GK L+GEVFGS CRLKGPDALTKFM+ +HNA GGQD EKFPF FD+NGKYVQALLTAN
Sbjct: 846 GKFLIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANT 905
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
R M+G+ +GAFCFLQIAS E+QQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+ FT
Sbjct: 906 RSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFT 965
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
NSLL+ TDL +DQ+Q LET +ACEKQM KI+KD L+SIEDGSL EK+EF G V+NAV
Sbjct: 966 NSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFSFGDVMNAV 1025
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
VSQ M+LLRER+LQLIRDIP+EIK + YGDQ RIQQVLADFLL+MVR +PS GWVEI
Sbjct: 1026 VSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPSENGWVEIQ 1085
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
VRP +KQ+S+G FR CPGEGLP ++VQDMF +S+W TQEG+GLS CRKILKLM
Sbjct: 1086 VRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLM 1145
Query: 1079 NGEVQYIRESERCYFLIIFELPMPR 1103
GEVQYIRESER +FLI+ ELP PR
Sbjct: 1146 GGEVQYIRESERSFFLIVLELPQPR 1170
>gi|39777289|gb|AAR30914.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
Length = 1178
Score = 1753 bits (4539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 840/1105 (76%), Positives = 947/1105 (85%), Gaps = 38/1105 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DARLHAVFEQSG SG+SFDYSQS+R EQQI+AYLS+IQRGGHI
Sbjct: 66 SVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHI 125
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIGTDVRTLFTSS 152
QPFGCT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQSQKLAVRAIS+LQ+LPGGDIKLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHATP+ VIQD G+ QPLCLVGST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGG---RSTTRLW------------ 376
LRAPHGCHAQYMANMGSIASL +AVII+ G D+E G S +LW
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRC 425
Query: 377 --------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPS
Sbjct: 426 IPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPS 485
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAALYY GKYYPLGVTPTE+QIKDI+EWL HGDSTGLSTDSLADAGY A
Sbjct: 486 IMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGA 545
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
A LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL
Sbjct: 546 AALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 605
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDEL 598
EVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G++EL
Sbjct: 606 EVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINEL 665
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV+DL++KE E
Sbjct: 666 SSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESE 725
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
EIV+ LL AL+GEEDKNVEIKL+TFG+E A+FV+VNACSS+DYT NIVGVCFVGQD
Sbjct: 726 EIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQD 785
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
VT QK+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENT CSEWNTAMEKLTGWSRG+++
Sbjct: 786 VTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVV 845
Query: 779 GKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
GK L+GEVFGS CRLKGPDALTKFM+ +HNA GGQD EKFPF FD+NGKYVQALLTAN
Sbjct: 846 GKFLIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANT 905
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
R M+G+ +GAFCFLQIAS E+QQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+ FT
Sbjct: 906 RSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFT 965
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
NSLL+ TDL +DQ+Q LET +ACEKQM KI+KD L+SIEDGSL EK+EF G V+NAV
Sbjct: 966 NSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFSFGDVMNAV 1025
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
VSQ M+LLRER+LQLIRDIP+EIK + YGDQ RIQQVLADFLL+MVR +PS GWVEI
Sbjct: 1026 VSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPSENGWVEIQ 1085
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
VRP +KQ+S+G FR CPGEGLP ++VQDMF +S+W TQEG+GLS CRKILKLM
Sbjct: 1086 VRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLM 1145
Query: 1079 NGEVQYIRESERCYFLIIFELPMPR 1103
GEVQYIRESER +FLI+ ELP PR
Sbjct: 1146 GGEVQYIRESERSFFLIVLELPQPR 1170
>gi|388458328|gb|AFK31030.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1753 bits (4539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 959/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADVLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+ VGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLPVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458254|gb|AFK30993.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1753 bits (4539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 959/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+L +L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLHAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI V+P +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVKPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|222624796|gb|EEE58928.1| hypothetical protein OsJ_10581 [Oryza sativa Japonica Group]
Length = 1128
Score = 1752 bits (4538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 841/1119 (75%), Positives = 950/1119 (84%), Gaps = 40/1119 (3%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQ 91
A + +VSKA+AQYT+DARLHAVFEQSG SG+SFDY+QS+R EQQI+AYLS+IQ
Sbjct: 9 ADAAESVSKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQ 68
Query: 92 RGGHIQPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVR 146
RGGHIQPFGCT+AV D+++FR++AYSEN ++L L+P SVP+L+ + +++G D R
Sbjct: 69 RGGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADAR 128
Query: 147 TLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDP 206
LF SS+VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDP
Sbjct: 129 LLFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDP 188
Query: 207 ALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHG 266
ALSIAGAVQSQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHG
Sbjct: 189 ALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHG 248
Query: 267 EVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPL 326
EVVAES+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHA P+ VIQD L QPL
Sbjct: 249 EVVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPL 308
Query: 327 CLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGR----STTRLW----- 376
CLVGSTLR+PHGCHAQYMANMGSIASL +AVII+ G D++ R S +LW
Sbjct: 309 CLVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVC 368
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP G
Sbjct: 369 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 428
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY GKYYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLA
Sbjct: 429 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 488
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA LGDAV GMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR
Sbjct: 489 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 548
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLE 591
SSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRD+ SNSKA+VN Q L +LE
Sbjct: 549 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 608
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
L+G+DELSSVAREMVRLIETAT PIFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+D
Sbjct: 609 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 668
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
L++KE EE V+ LL AL+G+EDKNVEIKL+TFG E K +FV+VNACSS+DYT NIVG
Sbjct: 669 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 728
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQDVT QK+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTG
Sbjct: 729 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 788
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQ 831
WSRG+++GK+LVGEVFG+CCRLKGPDALTKFMI LHNA GGQD EKFPF FD+NGKYVQ
Sbjct: 789 WSRGEVVGKLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQ 848
Query: 832 ALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNP 891
ALLTAN R M+G+ +GAFCFLQIASPELQQA +QR EKKC+AR+KELAYI QEIKNP
Sbjct: 849 ALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNP 908
Query: 892 LSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLL 951
L+G+ FTNSLLE TDL +DQ+Q LETS ACEKQM KI+KD L+SIEDGSL EK EF L
Sbjct: 909 LNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSL 968
Query: 952 GSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSA 1011
GSV+NAVVSQVM+ LRER+LQLIRDIP+EIK + YGDQ RIQQVL DFLL+MVR++P+
Sbjct: 969 GSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAE 1028
Query: 1012 EGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMC 1071
GWVEI VRP +KQ+S+G + FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+C
Sbjct: 1029 NGWVEIQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSIC 1088
Query: 1072 RKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSKSIT 1110
RKILKLM GEVQYIRESER +F I+ ELP P++ + T
Sbjct: 1089 RKILKLMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1127
>gi|39777271|gb|AAR30905.1| phytochrome B [Sorghum bicolor]
gi|39777273|gb|AAR30906.1| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1752 bits (4538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 840/1105 (76%), Positives = 947/1105 (85%), Gaps = 38/1105 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DARLHAVFEQSG SG+SFDYSQS+R EQQI+AYLS+IQRGGHI
Sbjct: 66 SVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHI 125
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIGTDVRTLFTSS 152
QPFGCT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQSQKLAVRAIS+LQ+LPGGDIKLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHATP+ VIQD G+ QPLCLVGST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGG---RSTTRLW------------ 376
LRAPHGCHAQYMANMGSIASL +AVII+ G D+E G S +LW
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRC 425
Query: 377 --------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPS
Sbjct: 426 IPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPS 485
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAALYY GKYYPLGVTPTE+QIKDI+EWL HGDSTGLSTDSLADAGY A
Sbjct: 486 IMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGA 545
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
A LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL
Sbjct: 546 AALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 605
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVN--AQLVDLELQGVDEL 598
EVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+VN AQL +LEL+G++EL
Sbjct: 606 EVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQAQLGELELRGINEL 665
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSV REMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV+DL++KE E
Sbjct: 666 SSVPREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESE 725
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
EIV+ LL AL+GEEDKNVEIKL+TFG+E A+FV+VNACSS+DYT NIVGVCFVGQD
Sbjct: 726 EIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQD 785
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
VT QK+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENT CSEWNTAMEKLTGWSRG+++
Sbjct: 786 VTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVV 845
Query: 779 GKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
GK L+GEVFGS CRLKGPDALTKFM+ +HNA GGQD EKFPF FD+NGKYVQALLTAN
Sbjct: 846 GKFLIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANT 905
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
R M+G+ +GAFCFLQIAS E+QQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+ FT
Sbjct: 906 RSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFT 965
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
NSLL+ TDL +DQ+Q LET +ACEKQM KI+KD L+SIEDGSL EK+EF G V+NAV
Sbjct: 966 NSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFSFGDVMNAV 1025
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
VSQ M+LLRER+LQLIRDIP+EIK + YGDQ RIQQVLADFLL+MVR +PS GWVEI
Sbjct: 1026 VSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPSENGWVEIQ 1085
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
VRP +KQ+S+G FR CPGEGLP ++VQDMF +S+W TQEG+GLS CRKILKLM
Sbjct: 1086 VRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLM 1145
Query: 1079 NGEVQYIRESERCYFLIIFELPMPR 1103
GEVQYIRESER +FLI+ ELP PR
Sbjct: 1146 GGEVQYIRESERSFFLIVLELPQPR 1170
>gi|388458210|gb|AFK30971.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1752 bits (4537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVV ES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVTESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEAQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458332|gb|AFK31032.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1752 bits (4537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1151 (73%), Positives = 957/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIP IFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPLIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+N VVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNVVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458270|gb|AFK31001.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1752 bits (4537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN +ML L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADMLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMELWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLN+ELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNIELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458320|gb|AFK31026.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1751 bits (4536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1151 (73%), Positives = 958/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+P+GCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPYGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458316|gb|AFK31024.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1751 bits (4536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 846/1151 (73%), Positives = 958/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQD+T QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDITGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQ+ KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQISKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458216|gb|AFK30974.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458218|gb|AFK30975.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458220|gb|AFK30976.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458260|gb|AFK30996.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458268|gb|AFK31000.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1751 bits (4536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+V DMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|39777293|gb|AAR30916.1| phytochrome B [Sorghum propinquum]
Length = 1177
Score = 1751 bits (4536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/1105 (75%), Positives = 946/1105 (85%), Gaps = 38/1105 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DARLHAVFEQSG SG+SFDYSQS+R EQQI+AYLS+IQRGGHI
Sbjct: 65 SVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHI 124
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIGTDVRTLFTSS 152
QPFGCT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+ S
Sbjct: 125 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPHVSLGADARLLFSPS 184
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+VLLE+AF AREI+LLNP+WIHS+ + PFYAILHR+DVG+VIDLEPARTEDPALSIAG
Sbjct: 185 SAVLLERAFAAREISLLNPLWIHSRVSSNPFYAILHRIDVGVVIDLEPARTEDPALSIAG 244
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQSQKLAVRAIS+LQ+LPGGDIKLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES
Sbjct: 245 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 304
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHATP+ VIQD G+ QPLCLVGST
Sbjct: 305 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 364
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGG---RSTTRLW------------ 376
LRAPHGCHAQYMANMGSIASL +AVII+ G D+E G S +LW
Sbjct: 365 LRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRC 424
Query: 377 --------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPS
Sbjct: 425 IPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPS 484
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAALYY GKYYPLGVTPTE+QIKDI+EWL HGDSTGLSTDSLADAGY A
Sbjct: 485 IMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGA 544
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
A LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL
Sbjct: 545 AALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 604
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDEL 598
EVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G++EL
Sbjct: 605 EVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINEL 664
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV+DL++KE E
Sbjct: 665 SSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESE 724
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
EIV+ LL AL+GEEDKNVEIKL+TFG+E A+FV+VNACSS+DYT NIVGVCFVGQD
Sbjct: 725 EIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQD 784
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
VT QK+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENT CSEWNTAMEKLTGWSRG+++
Sbjct: 785 VTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVV 844
Query: 779 GKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
GK L+GEVFGS CRLKGPDALTKFM+ +HNA GGQD EKFPF FD+NGKYVQALLTAN
Sbjct: 845 GKFLIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANT 904
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
R M+G+ +GAFCFLQIAS E+QQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+ FT
Sbjct: 905 RSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFT 964
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
NSLL+ TDL +DQ+Q LET +ACEKQM KI+KD L+SIEDGSL EK+EF G V+NAV
Sbjct: 965 NSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFSFGDVMNAV 1024
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
VSQ M+LLRER+LQLIRDIP+EIK + YGDQ RIQQVLADFLL+MVR +PS GWVEI
Sbjct: 1025 VSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPSENGWVEIQ 1084
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
VRP +KQ+S+G FR CPGEGLP ++VQDMF +S+W TQEG+GLS CRKILKLM
Sbjct: 1085 VRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLM 1144
Query: 1079 NGEVQYIRESERCYFLIIFELPMPR 1103
GEVQYIRESER +FLI+ ELP PR
Sbjct: 1145 GGEVQYIRESERSFFLIVLELPQPR 1169
>gi|388458258|gb|AFK30995.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1751 bits (4536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1151 (73%), Positives = 957/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSILSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+V DMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458344|gb|AFK31038.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1751 bits (4535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1151 (73%), Positives = 957/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHY ATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYFATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QN VRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP PR+ +
Sbjct: 1156 VLELPQPRQAA 1166
>gi|388458348|gb|AFK31040.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1751 bits (4534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLL DMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLRDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMNGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458290|gb|AFK31011.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1751 bits (4534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 959/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VI+LEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVINLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458246|gb|AFK30989.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1751 bits (4534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 957/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
QSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 GQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHRVDVG+VIDLEPARTEDPALSIAGA QSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRVDVGVVIDLEPARTEDPALSIAGAAQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSILSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+V DMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458238|gb|AFK30985.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458308|gb|AFK31020.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458376|gb|AFK31054.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1750 bits (4533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE + LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETENKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458314|gb|AFK31023.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1750 bits (4533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSARCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE + LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETENKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458274|gb|AFK31003.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1750 bits (4533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1155 (73%), Positives = 959/1155 (83%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFFMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDTPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIK+I+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKNIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458212|gb|AFK30972.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1750 bits (4533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 838/1114 (75%), Positives = 946/1114 (84%), Gaps = 40/1114 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DARLHAVFEQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHI
Sbjct: 57 SVSKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHI 116
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTS 151
QPFGCT+AV D+++FR++AYSEN ++L L+P SVP+L+ + +++G D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 152 SSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIA 211
SS+VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIA
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 212 GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAE 271
GAVQSQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 272 SKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGS 331
S+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 332 TLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGR----STTRLW---------- 376
TLR+PHGCHAQYMANMGSIASL +AVII+ G D++ R S +LW
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSP 416
Query: 377 ----------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQS 420
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQS
Sbjct: 417 RCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQS 476
Query: 421 PSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYP 480
PSIMDLVKCDGAALYY GKYYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY
Sbjct: 477 PSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYS 536
Query: 481 KAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 540
AA LGDAV GMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA
Sbjct: 537 GAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 596
Query: 541 FLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVD 596
FLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+D
Sbjct: 597 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGID 656
Query: 597 ELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKE 656
ELSSVAREMVRLIETAT PIFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE
Sbjct: 657 ELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKE 716
Query: 657 YEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVG 716
EE V+ LL AL+G+EDKNVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVG
Sbjct: 717 SEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVG 776
Query: 717 QDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGD 776
QDVT QK+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+
Sbjct: 777 QDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGE 836
Query: 777 IIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTA 836
++GK+LVGEVFG+CCRLKGPDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTA
Sbjct: 837 VVGKLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTA 896
Query: 837 NKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVS 896
N R M+G+ +GAFCFLQIASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+
Sbjct: 897 NTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIR 956
Query: 897 FTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVIN 956
FTNSLLE TDL +DQ+Q LETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+N
Sbjct: 957 FTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMN 1016
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
AVVSQVM+ LRER+LQLIRDIP+EIK + YGDQ R QQVL DFLL+MVR++P+ GWVE
Sbjct: 1017 AVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRTQQVLCDFLLSMVRFAPAENGWVE 1076
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILK 1076
I VRP +KQ+S+G + FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILK
Sbjct: 1077 IQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILK 1136
Query: 1077 LMNGEVQYIRESERCYFLIIFELPMPRRGSKSIT 1110
LM GEVQYIRESER +F I+ ELP P++ + T
Sbjct: 1137 LMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|388458256|gb|AFK30994.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1750 bits (4533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPPSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AR I+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAARGISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+V DMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458252|gb|AFK30992.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1750 bits (4532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1151 (73%), Positives = 957/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+L +L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLHAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PH CHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHDCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458234|gb|AFK30983.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1750 bits (4532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVY FHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYGFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRRIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458226|gb|AFK30979.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1750 bits (4532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1151 (73%), Positives = 956/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHS QLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSSQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRPHEKKCYARMKELAYIFQEIKNPLHGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458374|gb|AFK31053.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1750 bits (4532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCC EWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCLEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458272|gb|AFK31002.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1749 bits (4531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1155 (73%), Positives = 957/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF ARE +LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAARETSLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+V DMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVHDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458340|gb|AFK31036.1| phytochrome b, partial [Oryza rufipogon]
gi|388458342|gb|AFK31037.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1749 bits (4531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1151 (73%), Positives = 957/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHY ATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYFATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QN VRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|1172496|sp|P42499.1|PHYB_SOYBN RecName: Full=Phytochrome B
gi|516103|gb|AAA34000.1| phytochrome B [Glycine max]
Length = 1156
Score = 1749 bits (4531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1123 (75%), Positives = 943/1123 (83%), Gaps = 57/1123 (5%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
++SKAIAQYT D +HAVFEQSGESG+SF+YS+S+R S SVPEQQI+AYL KIQRGG I
Sbjct: 37 SMSKAIAQYTEDG-VHAVFEQSGESGRSFNYSESIRIASESVPEQQITAYLVKIQRGGFI 95
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------------------- 137
QPFG IAVDE +FR++ YS+NA +MLG+ PQSVP+L+ +
Sbjct: 96 QPFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGPQSVPSLDDKND 155
Query: 138 -ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
+GTDVR LFT SS++LLEKAF AREI+L+NPIWIHS+ +GKPFY ILHR+DVGIVI
Sbjct: 156 AAFALGTDVRALFTHSSALLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVI 215
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
DLEPARTEDPALSIAGAVQSQ+ VRAISQLQSLP D+KLLCDTVVESVR+LTGYDRVM
Sbjct: 216 DLEPARTEDPALSIAGAVQSQEALVRAISQLQSLPSADVKLLCDTVVESVRELTGYDRVM 275
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
VY+FHEDEHGEVV+ESKRPDLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+ + V
Sbjct: 276 VYKFHEDEHGEVVSESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRV 335
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW 376
+QDE L+QPLCLVGSTL APHGCHAQYMANMGSIASL +AVIINGNDEE VGGRS+ RLW
Sbjct: 336 VQDEALVQPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVIINGNDEEGVGGRSSMRLW 395
Query: 377 --------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
AFGLQLNMELQLA+Q EK VLRTQTLLCDMLLR
Sbjct: 396 GLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLR 455
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
DSP GIVTQSPSIMDLVKCDGAALY+QG YYPLGVTPTE QI+DI+EWLL +HGDSTGLS
Sbjct: 456 DSPTGIVTQSPSIMDLVKCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLS 515
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSL DAGYP LG G VAYIT++DFLFWFRSHTAKEIKWGGAK + GQ
Sbjct: 516 TDSLGDAGYPGLPRLGMQFVGWQVAYITEKDFLFWFRSHTAKEIKWGGAKLILRTRMMGQ 575
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDL 590
RMHP SSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSF+DAE NSKAVV+ + +
Sbjct: 576 RMHPLSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEHRNSKAVVDPHVSEQ 635
Query: 591 ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVH 650
ELQGVDELSSVAREMVRLIETATAPIFAVDV G VNGWNAKV+ELTGL VEEAMGKSLVH
Sbjct: 636 ELQGVDELSSVAREMVRLIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVH 695
Query: 651 DLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
DLV+KE EE V+ LL EEDKNVE K+RTFG E++ KA F+VVNACSSK +TNN+V
Sbjct: 696 DLVFKESEETVNKLLSR----EEDKNVETKMRTFGKEHQNKAAFLVVNACSSKHFTNNVV 751
Query: 711 GVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLT 770
GVCFVGQ+VT QK+VM KFI+IQGDYKAIVHSPNPLIPPIFASD+NTCC EWNTAMEKL
Sbjct: 752 GVCFVGQNVTGQKIVMHKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLD 811
Query: 771 GWSRG------DIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFD 824
+ D+IGKMLVGEVFGSCC+LKG D++TKFMI LHNA GGQDT+KFPF D
Sbjct: 812 PSNENVTVGGVDVIGKMLVGEVFGSCCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLD 871
Query: 825 RNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYI 884
R+GKYVQ LTANKRVNMEGQI+GAFCFLQI SPELQQAL QRQQEK+ R+KELAYI
Sbjct: 872 RHGKYVQTFLTANKRVNMEGQIIGAFCFLQIMSPELQQALKAQRQQEKEFLGRMKELAYI 931
Query: 885 CQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEF 944
CQ +K PLSG+ FTNSLLEAT LT +QKQ LETS ACEKQMLKII+DVDLESIEDGSLE
Sbjct: 932 CQGVKKPLSGIRFTNSLLEATSLTNEQKQFLETSVACEKQMLKIIRDVDLESIEDGSLEL 991
Query: 945 EKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNM 1004
EK EFLLG+VINAVVSQV++LLRERNLQLIRDIPEEIKTLAVYGDQ RIQQVL+DFLLN+
Sbjct: 992 EKGEFLLGNVINAVVSQVILLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNI 1051
Query: 1005 VRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQE 1064
VRY+PS +GWVEIHVRP +KQ S+G T++H EFRMVCPGEGLPPEL+QDMF++SRW TQE
Sbjct: 1052 VRYAPSPDGWVEIHVRPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFNNSRWGTQE 1111
Query: 1065 GLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
GLGLSM RKILKLMNGEVQYIRE+ERCYF ++ ELP+ RR SK
Sbjct: 1112 GLGLSMSRKILKLMNGEVQYIREAERCYFYVLLELPVTRRSSK 1154
>gi|388458366|gb|AFK31049.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1749 bits (4531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+V DLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVTDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFH DEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHGDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF++NRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRRNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458302|gb|AFK31017.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1749 bits (4530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE + LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETENKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458356|gb|AFK31044.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1749 bits (4530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 846/1151 (73%), Positives = 956/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNME LA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMECSLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458298|gb|AFK31015.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1749 bits (4530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 846/1151 (73%), Positives = 957/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G + R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGANARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCC EWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCLEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458336|gb|AFK31034.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1749 bits (4529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KL+CDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLICDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE E V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESGETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS A EKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTASEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458312|gb|AFK31022.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1748 bits (4528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGC +AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCPLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN +++ L+P SVP+L+ + +++G D R LF SS+ LLE+AF AREI+LLN
Sbjct: 136 YSENTADLVDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSADLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458338|gb|AFK31035.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1748 bits (4528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1155 (73%), Positives = 957/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHY ATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYFATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QN VRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPTFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458354|gb|AFK31043.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1748 bits (4528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 845/1151 (73%), Positives = 956/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPIPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+ IDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVAIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDT+VE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTIVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+ FG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKPFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458352|gb|AFK31042.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1748 bits (4527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1155 (73%), Positives = 957/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLL DSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLWDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQ IR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQFIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458224|gb|AFK30978.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1748 bits (4527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1155 (73%), Positives = 957/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+V DLEPARTEDPALSIAGAVQS KLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVNDLEPARTEDPALSIAGAVQSLKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|326516988|dbj|BAJ96486.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1168
Score = 1748 bits (4527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 833/1108 (75%), Positives = 948/1108 (85%), Gaps = 40/1108 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DA LHAVFEQSG SG+SFDYSQS+ EQQI+AYLS+IQRGGHI
Sbjct: 54 SVSKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSSEQQIAAYLSRIQRGGHI 113
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTS 151
QPFGCT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+
Sbjct: 114 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSP 173
Query: 152 SSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIA 211
SS VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIA
Sbjct: 174 SSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 233
Query: 212 GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAE 271
GAVQSQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVY+FH+DEHGEV+AE
Sbjct: 234 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAE 293
Query: 272 SKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGS 331
S+R DLEPY GLHYPATDIPQASRFLF+QNRVRMI DCHA + VIQD + QPLCLVGS
Sbjct: 294 SRRGDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGS 353
Query: 332 TLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGR----STTRLW---------- 376
TLR+PHGCHAQYMANMGSIASL +AVII+ G ++E R S +LW
Sbjct: 354 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSP 413
Query: 377 ----------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQS 420
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQS
Sbjct: 414 RCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQS 473
Query: 421 PSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYP 480
PSIMDLVKCDGAAL+Y GKYYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP
Sbjct: 474 PSIMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYP 533
Query: 481 KAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 540
A LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA
Sbjct: 534 GATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 593
Query: 541 FLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVD 596
FLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G+D
Sbjct: 594 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGID 653
Query: 597 ELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKE 656
ELSSVAREMVRLIETAT PIFAVD +GC+NGWNAKVAELTGL+VEEAMGKSL+ DL++KE
Sbjct: 654 ELSSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKE 713
Query: 657 YEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVG 716
EEIV+ LL AL+GEE NVEIKL+TFG+E K +FV+VNACSS+DYT NIVGVCFVG
Sbjct: 714 SEEIVEKLLSQALRGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVGVCFVG 773
Query: 717 QDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGD 776
QD+T QK+VMDKF++IQGDYKAIVH+PNPLIPPIFASDEN CCSEWNTAME LTGWSRG+
Sbjct: 774 QDITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTGWSRGE 833
Query: 777 IIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTA 836
++GK+LVGEVFG+CCRLKGPDALTKFMIALHNA GGQD+EK PF FD+NGKYVQALLTA
Sbjct: 834 VVGKLLVGEVFGNCCRLKGPDALTKFMIALHNAIGGQDSEKSPFSFFDKNGKYVQALLTA 893
Query: 837 NKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVS 896
N R M+G+ +GAFCFLQIASPELQQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+
Sbjct: 894 NTRSKMDGETIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIR 953
Query: 897 FTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVIN 956
FTNSLLE TDL +DQ+Q LETSAACEKQM KI+KD L+SIEDGSL EK EF LG+V+N
Sbjct: 954 FTNSLLEMTDLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGNVMN 1013
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
AVVSQVM+LLRER+LQLIRDIP+EIK + YGDQ RIQQVL+ FLL+MVR++P+ GWVE
Sbjct: 1014 AVVSQVMILLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSHFLLSMVRFAPTENGWVE 1073
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILK 1076
I VRP +KQ+S+G + FR CPGEGLPP++VQDMF ++RW TQEG+GLS+CRKILK
Sbjct: 1074 IQVRPNVKQNSDGTETMLFLFRFACPGEGLPPDIVQDMFSNARWTTQEGIGLSVCRKILK 1133
Query: 1077 LMNGEVQYIRESERCYFLIIFELPMPRR 1104
LM GEVQYIRESER +FLI+ ELP PRR
Sbjct: 1134 LMGGEVQYIRESERSFFLIVLELPQPRR 1161
>gi|11134029|sp|P93527.2|PHYB_SORBI RecName: Full=Phytochrome B
gi|7110162|gb|AAB41398.2| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1748 bits (4526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 838/1105 (75%), Positives = 946/1105 (85%), Gaps = 38/1105 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DARLHAVFEQSG SG+SFDYSQS+R EQQI+AYLS+IQRGGHI
Sbjct: 66 SVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHI 125
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIGTDVRTLFTSS 152
QPFGCT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQSQKLAVRAIS+LQ+LPGGDIKLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHATP+ VIQD G+ QPLCLVGST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGG---RSTTRLW------------ 376
LRAPHGCHAQYMANMGSIASL +AVII+ G D+E G S +LW
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRC 425
Query: 377 --------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPS
Sbjct: 426 IPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPS 485
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAALYY GKYYPLGVTPTE+QIKDI+EWL HGDSTGLSTDSLADAGY A
Sbjct: 486 IMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGA 545
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
A LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL
Sbjct: 546 AALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 605
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDEL 598
EVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G++EL
Sbjct: 606 EVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINEL 665
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV+DL++KE E
Sbjct: 666 SSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESE 725
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
EIV+ LL AL+GEEDKNVEIKL+TFG+E A+FV+VNACSS+DYT NIVGVCFVGQD
Sbjct: 726 EIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQD 785
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
VT QK+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENT CSEWNTAMEKLTGWSRG+++
Sbjct: 786 VTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVV 845
Query: 779 GKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
GK L+GEVFGS CRLKGPDALTKFM+ +HNA GGQD EKFPF FD+NGKYVQALLTAN
Sbjct: 846 GKFLIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANT 905
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
R M+G+ +GAFCFLQIAS E+QQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+ FT
Sbjct: 906 RSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFT 965
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
NSLL+ TDL +DQ+Q LET +ACE+QM KI+KD L+SIEDGSL EK+EF G V+NAV
Sbjct: 966 NSLLQMTDLNDDQRQFLETCSACEEQMSKIVKDATLQSIEDGSLVLEKSEFSFGDVMNAV 1025
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
VSQ M+LLRER+LQLIRDIP+EIK + YGDQ RIQQVLADFLL+MVR +PS GWVEI
Sbjct: 1026 VSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPSENGWVEIQ 1085
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
VRP +KQ+S+G FR PGEGLP ++VQDMF +S+W TQEG+GLS CRKILKLM
Sbjct: 1086 VRPNVKQNSDGTDTELFIFRFTYPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLM 1145
Query: 1079 NGEVQYIRESERCYFLIIFELPMPR 1103
GEVQYIRESER +FLI+ ELP PR
Sbjct: 1146 GGEVQYIRESERSFFLIVLELPQPR 1170
>gi|388458214|gb|AFK30973.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458222|gb|AFK30977.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1747 bits (4525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1155 (73%), Positives = 957/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VI LEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIGLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KL CDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLPCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458322|gb|AFK31027.1| phytochrome b, partial [Oryza officinalis]
Length = 1171
Score = 1747 bits (4524), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 846/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQITAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHED HGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDGHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW++AEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWEDAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT Q++VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQRVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458334|gb|AFK31033.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1746 bits (4523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY++S+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTRSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQS-VPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P VP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHFVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYFGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VPELPQPQQAASRGT 1170
>gi|388458266|gb|AFK30999.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1746 bits (4521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1155 (73%), Positives = 958/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SF Y+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFYYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G + R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGANARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE + LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETENRLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458326|gb|AFK31029.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1746 bits (4521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 846/1155 (73%), Positives = 956/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QP CLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPQCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFW RSHTAKEIKWGGAKHHPEDKDDGQRMH RSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWIRSHTAKEIKWGGAKHHPEDKDDGQRMHSRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+ FG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKPFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458358|gb|AFK31045.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1745 bits (4520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 845/1151 (73%), Positives = 957/1151 (83%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+P+GC+AQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPNGCYAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLST SLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTVSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458228|gb|AFK30980.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1745 bits (4520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 837/1114 (75%), Positives = 945/1114 (84%), Gaps = 40/1114 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DARLHAVFEQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHI
Sbjct: 57 SVSKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHI 116
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTS 151
QPFGCT+AV D+++FR++AYSEN ++L L+P SVP+L+ + +++G D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 152 SSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIA 211
SS+VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIA
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 212 GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAE 271
GAVQSQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 272 SKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGS 331
S+R +LEPY GLHYPATDIPQASRF F+QNRVRMI DCHA P+ VIQD L QPLCLVGS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFPFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 332 TLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGR----STTRLW---------- 376
TLR+PHGCHAQYMANMGSIASL +AVII+ G D++ R S +LW
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSP 416
Query: 377 ----------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQS 420
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQS
Sbjct: 417 RCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQS 476
Query: 421 PSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYP 480
PSIMDLVKCDGAALYY GKYYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY
Sbjct: 477 PSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYS 536
Query: 481 KAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 540
AA LGDAV GMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA
Sbjct: 537 GAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 596
Query: 541 FLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVD 596
FLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+D
Sbjct: 597 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGID 656
Query: 597 ELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKE 656
ELSSVAREMVRLIETAT PIFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE
Sbjct: 657 ELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKE 716
Query: 657 YEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVG 716
EE V+ LL AL+G+EDKNVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVG
Sbjct: 717 SEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVG 776
Query: 717 QDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGD 776
QDVT QK+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+
Sbjct: 777 QDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGE 836
Query: 777 IIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTA 836
++GK+LVGEVFG+CCRLKGPDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTA
Sbjct: 837 VVGKLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTA 896
Query: 837 NKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVS 896
N R M+G+ +GAFCFLQIASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+
Sbjct: 897 NTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIR 956
Query: 897 FTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVIN 956
FTNSLLE TDL +DQ+Q LETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+N
Sbjct: 957 FTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMN 1016
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
AVVSQVM+ LRER+LQLIRDIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GW E
Sbjct: 1017 AVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWEE 1076
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILK 1076
I VRP +KQ+S+G + FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILK
Sbjct: 1077 IQVRPNIKQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILK 1136
Query: 1077 LMNGEVQYIRESERCYFLIIFELPMPRRGSKSIT 1110
LM GEVQYIRESER +F I+ ELP P++ + T
Sbjct: 1137 LMGGEVQYIRESERSFFHIVLELPQPQQAASRGT 1170
>gi|297800528|ref|XP_002868148.1| phytochrome D [Arabidopsis lyrata subsp. lyrata]
gi|297313984|gb|EFH44407.1| phytochrome D [Arabidopsis lyrata subsp. lyrata]
Length = 1165
Score = 1744 bits (4518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1132 (74%), Positives = 954/1132 (84%), Gaps = 41/1132 (3%)
Query: 9 QQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYS 68
+Q + S S AQ S + H TES SKAI QYTVDARLHAVFEQSGESGKSFDYS
Sbjct: 30 EQAQSSASKAQRSQNQQPQNHGAGTES--TSKAIQQYTVDARLHAVFEQSGESGKSFDYS 87
Query: 69 QSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLA 126
QS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +I YSENA EMLGL
Sbjct: 88 QSLKTAPYDPSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLM 147
Query: 127 PQSVPNL-EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYA 185
QSVP++ E E+LTIGTD+R+LF SSS VLLE+AF AREITLLNPIWIHSKNTGKPFYA
Sbjct: 148 SQSVPSIKEISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIHSKNTGKPFYA 207
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVV+S
Sbjct: 208 ILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDS 267
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 268 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 327
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIASLA+AVIINGN+E+
Sbjct: 328 IVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEED 387
Query: 366 A-----VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
GGR++ RLW AFGLQLNMELQLA Q+SE
Sbjct: 388 GNGGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSE 447
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
K VLR QTLLCDMLLRDSP GIVTQ PSIMDLVKC+GAA YQGKYY LGV PTE QI D
Sbjct: 448 KRVLRMQTLLCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQIND 507
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IVEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRDFLFWFRSHT KEI
Sbjct: 508 IVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEI 567
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKS+ PW+ AEMDAIHSLQLILRDSF+++
Sbjct: 568 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSQCQPWETAEMDAIHSLQLILRDSFKES 627
Query: 575 EASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNA 630
EA +SKA V D+ QG+ E+ +VAREM+RLIETAT PIFAVD+ GC+NGWNA
Sbjct: 628 EAMDSKASAPGGVQPHGDDMAEQGMQEIGAVAREMIRLIETATVPIFAVDIDGCINGWNA 687
Query: 631 KVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRK 690
K+AELTGLSVEEAMGKSLV DL+YKEY+E D LL ALKG+E KNVE+KL+TFG E +
Sbjct: 688 KIAELTGLSVEEAMGKSLVRDLIYKEYKETADRLLSCALKGDEGKNVEVKLKTFGPELQG 747
Query: 691 KAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPI 750
KAVFVVVNACSSKDY NNIVGVCFVGQDVT K VMDKFI+IQGDYKAI+HSPNPLIPPI
Sbjct: 748 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTGHKFVMDKFINIQGDYKAIIHSPNPLIPPI 807
Query: 751 FASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAF 810
FA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGSCCRLKGPDALTKFMI LHNA
Sbjct: 808 FAADENTCCIEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVLHNAI 867
Query: 811 GGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQ 870
GGQ+T+KFPFP FDR GK++QALLT NKRV+++G+I+GAFCFLQI SPELQQAL VQR+Q
Sbjct: 868 GGQETDKFPFPFFDREGKFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQ 927
Query: 871 EKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIK 930
E + F+R KELAYI Q IKNPLSG+ FTNSLLEAT+L EDQKQLLETS +CEKQ+ KI+
Sbjct: 928 ESEYFSRRKELAYIFQFIKNPLSGLRFTNSLLEATNLNEDQKQLLETSVSCEKQISKIVG 987
Query: 931 DVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQ 990
++D++SIEDGS E+ EF +GSVINAVVSQVM ++RERN+QLIR+IP EIK++AVYGDQ
Sbjct: 988 EMDVKSIEDGSFLLERTEFFIGSVINAVVSQVMFVVRERNIQLIRNIPAEIKSMAVYGDQ 1047
Query: 991 ARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPEL 1050
R+QQVLA+FLL++VRY+P EG VE+H+ P LKQ ++G + + EFRM C GEG+PPE
Sbjct: 1048 IRLQQVLAEFLLSIVRYAP-LEGSVELHLCPVLKQMADGFSAIRLEFRMACAGEGVPPEK 1106
Query: 1051 VQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+ ELP+P
Sbjct: 1107 VQDMFHSSRWTSPEGLGLSVCRKILKLMNGRVQYIREFERSYFLIVIELPVP 1158
>gi|62199070|gb|AAX76779.1| putative phytochrome B [Triticum aestivum]
Length = 1166
Score = 1744 bits (4516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 833/1108 (75%), Positives = 947/1108 (85%), Gaps = 40/1108 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQYT+DA LHAVFEQSG SG+SFDYSQS+ EQQI+AYLS+IQRGGHI
Sbjct: 52 SVSKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSSEQQIAAYLSRIQRGGHI 111
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTS 151
QPFGCT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+
Sbjct: 112 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSP 171
Query: 152 SSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIA 211
SS VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIA
Sbjct: 172 SSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 231
Query: 212 GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAE 271
GAVQSQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVY+FH+DEHGEV+AE
Sbjct: 232 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAE 291
Query: 272 SKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGS 331
S+R DLEPY GLHYPATDIPQASRFLF+QNRVRMI DCHA + VIQD + QPLCLVGS
Sbjct: 292 SRRGDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGS 351
Query: 332 TLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGR----STTRLW---------- 376
TLR+PHGCHAQYMANMGSIASL +AVII+ G ++E R S +LW
Sbjct: 352 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSP 411
Query: 377 ----------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQS 420
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQS
Sbjct: 412 RCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHMLRTQTLLCDMLLRDSPTGIVTQS 471
Query: 421 PSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYP 480
PSIMDLVKCDGAAL+Y GKYYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP
Sbjct: 472 PSIMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYP 531
Query: 481 KAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 540
A LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA
Sbjct: 532 GATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 591
Query: 541 FLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVD 596
FLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G+D
Sbjct: 592 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGID 651
Query: 597 ELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKE 656
ELSSVAREMVRLIETAT PIFAVD +GC+NGWNAKVAELTGL+VEEAMGKSLV DL++KE
Sbjct: 652 ELSSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLVKDLIFKE 711
Query: 657 YEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVG 716
EEIV+ LL ALKGEE NVEIKL+TFG+E K +FV+VNACSS+DYT +IVGVCFVG
Sbjct: 712 SEEIVEKLLSQALKGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKSIVGVCFVG 771
Query: 717 QDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGD 776
QD+T QK+VMDKF++IQGDYKAIVH+PNPLIPPIFASDEN CCSEWNTAMEKLTGWSRG+
Sbjct: 772 QDITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMEKLTGWSRGE 831
Query: 777 IIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTA 836
++GK+LVGEVFG+CCRLKGPDALTKFMI LHNA GGQD+EK PF FD+NGKYVQALLTA
Sbjct: 832 VVGKLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDSEKSPFSFFDKNGKYVQALLTA 891
Query: 837 NKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVS 896
N R M+G+ +GAFCFLQIASPELQQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+
Sbjct: 892 NTRSKMDGETIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIR 951
Query: 897 FTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVIN 956
FTNSLLE TDL +DQ+Q LETSAACEKQM KI+KD L+SIEDGSL EK EF LG+V+N
Sbjct: 952 FTNSLLEMTDLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGNVMN 1011
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
AVVSQVM+LLRER+LQLIRDIP+EIK + YGDQ RIQQVL+DFLL+MVR++P+ GWVE
Sbjct: 1012 AVVSQVMILLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSDFLLSMVRFAPTENGWVE 1071
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILK 1076
I VRP +KQ+S+G + FR CPGEGLPP++VQDMF ++RW TQEG+GLS+CRKILK
Sbjct: 1072 IQVRPNVKQNSDGTETMLFLFRFACPGEGLPPDIVQDMFSNARWTTQEGIGLSVCRKILK 1131
Query: 1077 LMNGEVQYIRESERCYFLIIFELPMPRR 1104
LM GE QYIRESER +FLI+ ELP P R
Sbjct: 1132 LMGGEEQYIRESERSFFLIVLELPQPLR 1159
>gi|6469491|emb|CAA40795.2| phytochrome B [Oryza sativa Indica Group]
Length = 1171
Score = 1744 bits (4516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 844/1155 (73%), Positives = 955/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + PFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKL VRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSNPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLVVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCH QYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHGQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRT TLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTGTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAADLGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACS++DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSTRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 PFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|388458360|gb|AFK31046.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1744 bits (4516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 845/1151 (73%), Positives = 955/1151 (82%), Gaps = 56/1151 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQS SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSDASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+L WFRSHTAKEIKWGGAKHHPEDKDDGQRM PRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLSWFRSHTAKEIKWGGAKHHPEDKDDGQRMRPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGS 1106
+ ELP P++ +
Sbjct: 1156 VLELPQPQQAA 1166
>gi|388458240|gb|AFK30986.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1744 bits (4516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 845/1155 (73%), Positives = 955/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KLLCDTVV VR+L GYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLLCDTVVGHVRELIGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN-GNDEEAVGGR----STTRLW--------------------------AFG 379
ASL +AVII+ G D++ R S +LW AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAV GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVGTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+N VVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNVVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|57791679|gb|AAW56607.1| phytochrome B [Cleome hassleriana]
Length = 1045
Score = 1743 bits (4515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 831/1046 (79%), Positives = 922/1046 (88%), Gaps = 34/1046 (3%)
Query: 59 GESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYS 116
GESGKSFDYS+S++T ++ SVPE+QI+AYLSKIQRGG+IQPFGC IAVDE+TF++I+YS
Sbjct: 1 GESGKSFDYSRSLKTTTYGSSVPEKQITAYLSKIQRGGYIQPFGCMIAVDESTFKIISYS 60
Query: 117 ENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHS 176
ENA EMLGL PQSVP++EK EIL IGTDVR+LFT SS+VLLE+AF AREITLLNP+WIHS
Sbjct: 61 ENAREMLGLMPQSVPSIEKPEILAIGTDVRSLFTPSSTVLLERAFVAREITLLNPVWIHS 120
Query: 177 KNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIK 236
KNTGKPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIK
Sbjct: 121 KNTGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIK 180
Query: 237 LLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRF 296
LLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRF
Sbjct: 181 LLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPATDIPQASRF 240
Query: 297 LFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALA 356
LFKQNRVRMIVDCHATP+CVIQDE L QPLCLVGSTLRAPHGCHAQYMANMGS+ASLA+A
Sbjct: 241 LFKQNRVRMIVDCHATPVCVIQDERLTQPLCLVGSTLRAPHGCHAQYMANMGSLASLAMA 300
Query: 357 VIINGNDEEA---VGGRSTTRLW--------------------------AFGLQLNMELQ 387
VIINGN+EEA GGR++ RLW AFGLQLNMELQ
Sbjct: 301 VIINGNEEEAGSVAGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQ 360
Query: 388 LASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTP 447
LA Q+SEK VLRTQTLLCDMLLRDSP GIVTQ PSIMDLVKCDGAA YQG+YYPLGV P
Sbjct: 361 LALQMSEKRVLRTQTLLCDMLLRDSPTGIVTQKPSIMDLVKCDGAAFLYQGRYYPLGVAP 420
Query: 448 TETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFR 507
+E QIKDIVEWLL HGDSTGLSTDSLADAGYP AATLGDAVCGMAVAYIT++DFLFWFR
Sbjct: 421 SEAQIKDIVEWLLANHGDSTGLSTDSLADAGYPGAATLGDAVCGMAVAYITRKDFLFWFR 480
Query: 508 SHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLIL 567
SHTAKEIKWGGAKHHPEDKDD QRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLIL
Sbjct: 481 SHTAKEIKWGGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLIL 540
Query: 568 RDSFRDAEASNSKAVVNAQLV--DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCV 625
RDSF+++E N++ V A D+ +QG+DELS+VAREMVRLIETAT PI AVDV G +
Sbjct: 541 RDSFKESETVNTRVAVRADQPGGDMAVQGLDELSAVAREMVRLIETATVPILAVDVEGRI 600
Query: 626 NGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFG 685
NGWN K+AELTGLSVEEAMGKSLV DL+YKEYEE V+ LL HAL+GEEDKNVEIK++TF
Sbjct: 601 NGWNGKIAELTGLSVEEAMGKSLVRDLIYKEYEETVEKLLSHALRGEEDKNVEIKMKTFS 660
Query: 686 AENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNP 745
E +AVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFIHIQGDYKAIVHSPNP
Sbjct: 661 RELEGQAVFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIVHSPNP 720
Query: 746 LIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIA 805
LIPPIFA+DENTCC EWNTAMEKLTGWSR ++IGKMLVGEVFGSCCRLKGPD LTKFMI
Sbjct: 721 LIPPIFAADENTCCLEWNTAMEKLTGWSRAEVIGKMLVGEVFGSCCRLKGPDTLTKFMIV 780
Query: 806 LHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALT 865
LHNA GG++T+KF FP FDRNGK+VQALLTANKRV+++G+I GAFCF+QI SPELQQAL
Sbjct: 781 LHNAIGGEETDKFSFPFFDRNGKFVQALLTANKRVSIDGKITGAFCFMQIPSPELQQALA 840
Query: 866 VQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQM 925
VQRQQE +C +R KELAYICQ IKNPLSG+ FTN LLEAT L+EDQKQLLETS +CEKQ+
Sbjct: 841 VQRQQETECISRAKELAYICQVIKNPLSGLRFTNLLLEATGLSEDQKQLLETSVSCEKQI 900
Query: 926 LKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLA 985
+II D++LE+IEDG +E EK EF++GSVINAVVSQVMML+RER LQLIRDIPEEIKT+A
Sbjct: 901 SRIIGDMNLETIEDGLVEVEKEEFIMGSVINAVVSQVMMLVRERGLQLIRDIPEEIKTMA 960
Query: 986 VYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEG 1045
VYGDQ RIQQVLA+FLL++++Y+PS +GWVEIH+ P LK +G + + +EFRM C GEG
Sbjct: 961 VYGDQMRIQQVLAEFLLSIIKYAPS-QGWVEIHLNPILKHLPDGSSSLRSEFRMACGGEG 1019
Query: 1046 LPPELVQDMFHSSRWMTQEGLGLSMC 1071
LPPELV+DMFH SRW T EGLGLS+C
Sbjct: 1020 LPPELVRDMFHGSRWTTPEGLGLSVC 1045
>gi|388458208|gb|AFK30970.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1742 bits (4512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 843/1155 (72%), Positives = 954/1155 (82%), Gaps = 56/1155 (4%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VI LEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIGLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
PGGD+KL CDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LEPY GLHYPATDI
Sbjct: 256 PGGDVKLPCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRSNLEPYIGLHYPATDI 315
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHGCHAQYMANMGSI
Sbjct: 316 PQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHGCHAQYMANMGSI 375
Query: 351 ASLALAVIIN--GNDEEAVGGRSTTR-----------------------------LWAFG 379
ASL +AVII+ G+D+ + ST + AFG
Sbjct: 376 ASLVMAVIISSGGDDDHNIARGSTPSAMKLRGLVVCHHTSPRCIPFPLRYACEFLMQAFG 435
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA QLSEKH+LRTQ LLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 436 LQLNMELQLAHQLSEKHILRTQALLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
YYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT
Sbjct: 496 YYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITP 555
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA
Sbjct: 556 SDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDA 615
Query: 560 IHSLQLILRDSFRDAE--ASNSKAVVNA--QLVDLELQGVDELSSVAREMVRLIETATAP 615
IHSLQLILRDSFRD+ SNSKA+VN QL +LEL+G+DELSSVAREMVRLIETAT P
Sbjct: 616 IHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVP 675
Query: 616 IFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDK 675
IFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDK
Sbjct: 676 IFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDK 735
Query: 676 NVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGD 735
NVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGD
Sbjct: 736 NVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGD 795
Query: 736 YKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKG 795
YKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKG
Sbjct: 796 YKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKG 855
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
PDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQI
Sbjct: 856 PDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQI 915
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q L
Sbjct: 916 ASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFL 975
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIR
Sbjct: 976 ETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIR 1035
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
DIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G +
Sbjct: 1036 DIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLF 1095
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRK LKLM GEVQYIRESER +F I
Sbjct: 1096 LFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKFLKLMGGEVQYIRESERSFFHI 1155
Query: 1096 IFELPMPRRGSKSIT 1110
+ ELP P++ + T
Sbjct: 1156 VLELPQPQQAASRGT 1170
>gi|297600820|ref|NP_001049910.2| Os03g0309200 [Oryza sativa Japonica Group]
gi|255674454|dbj|BAF11824.2| Os03g0309200, partial [Oryza sativa Japonica Group]
Length = 1120
Score = 1741 bits (4509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 835/1107 (75%), Positives = 941/1107 (85%), Gaps = 40/1107 (3%)
Query: 44 QYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTI 103
QYT+DARLHAVFEQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+
Sbjct: 13 QYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTL 72
Query: 104 AV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLE 158
AV D+++FR++AYSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE
Sbjct: 73 AVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLE 132
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQK
Sbjct: 133 RAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQK 192
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
LAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAES+R +LE
Sbjct: 193 LAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRRNNLE 252
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQASRFLF+QNRVRMI DCHA P+ VIQD L QPLCLVGSTLR+PHG
Sbjct: 253 PYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLRSPHG 312
Query: 339 CHAQYMANMGSIASLALAVIIN-GNDEEAVGGR----STTRLW----------------- 376
CHAQYMANMGSIASL +AVII+ G D++ R S +LW
Sbjct: 313 CHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCIPFPL 372
Query: 377 ---------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLV
Sbjct: 373 RYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLV 432
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYY GKYYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP AA LGD
Sbjct: 433 KCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAAALGD 492
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AV GMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS
Sbjct: 493 AVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 552
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAR 603
RSLPW+NAEMDAIHSLQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAR
Sbjct: 553 RSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAR 612
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLIETAT PIFAVD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+
Sbjct: 613 EMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNK 672
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
LL AL+G+EDKNVEIKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK
Sbjct: 673 LLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQK 732
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+VMDKFI+IQGDYKAIVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LV
Sbjct: 733 VVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLV 792
Query: 784 GEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNME 843
GEVFG+CCRLKGPDALTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+
Sbjct: 793 GEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMD 852
Query: 844 GQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLE 903
G+ +GAFCFLQIASPELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE
Sbjct: 853 GEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLE 912
Query: 904 ATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVM 963
TDL +DQ+Q LETS ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM
Sbjct: 913 MTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVM 972
Query: 964 MLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTL 1023
+ LRER+LQLIRDIP+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +
Sbjct: 973 IQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNI 1032
Query: 1024 KQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQ 1083
KQ+S+G + FR CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQ
Sbjct: 1033 KQNSDGTDTMLFLFRFACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQ 1092
Query: 1084 YIRESERCYFLIIFELPMPRRGSKSIT 1110
YIRESER +F I+ ELP P++ + T
Sbjct: 1093 YIRESERSFFHIVLELPQPQQAASRGT 1119
>gi|57791668|gb|AAW56602.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1741 bits (4508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 844/1145 (73%), Positives = 962/1145 (84%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
LGVTPT++QI DIVEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRD
Sbjct: 493 SLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+AFLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLI+TAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIKTATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+AMGKSLV +L+YKEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|296083241|emb|CBI22877.3| unnamed protein product [Vitis vinifera]
Length = 982
Score = 1740 bits (4507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 862/1110 (77%), Positives = 919/1110 (82%), Gaps = 130/1110 (11%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
M+S ++ Q H + AQSSGTSN+R +H T+SM SKAIAQYT+DARLHA
Sbjct: 1 MSSGNRGTQSHHQ----AQSSGTSNLRVYH--TDSM--SKAIAQYTMDARLHA------- 45
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
QQI+AYLSKIQRGGHIQPFGC +AVDEATFRVIA+SENA
Sbjct: 46 --------------------QQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAR 85
Query: 121 EMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTG 180
EMLGL PQSVP+LEK EIL +GTDVRTLFT SS+VLLEKAFGAREITLLNP+WIHSKN+G
Sbjct: 86 EMLGLTPQSVPSLEKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSG 145
Query: 181 KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 240
KPFYAILHR+DVGIVIDLEPARTEDPALSIAGA
Sbjct: 146 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGA--------------------------- 178
Query: 241 TVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQ 300
DEHGEVVAESKR DLEPY GLHYPATDIPQASRFLF+Q
Sbjct: 179 ----------------------DEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQ 216
Query: 301 NRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN 360
NRVRMIVDCHATP+ VIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGS ASLA+A ++
Sbjct: 217 NRVRMIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAFLMQ 276
Query: 361 GNDEEAVGGRSTTRLWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQS 420
AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSP GIVTQS
Sbjct: 277 ----------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQS 320
Query: 421 PSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYP 480
PSIMDLVKCDGAALY QGKYYP GVTPTE QIKDI EWLL H DSTGLSTDSLADAGYP
Sbjct: 321 PSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKDIAEWLLANHADSTGLSTDSLADAGYP 380
Query: 481 KAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 540
AA+LGDAVCGMAVAYIT RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA
Sbjct: 381 GAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 440
Query: 541 FLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA-EASNSKAVVNAQLVDLELQGVDELS 599
FLEVVKSRSLPW+NAEMDAIHSLQLILRDSF+DA + SNSKAV++AQL +LELQG+DELS
Sbjct: 441 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSKAVMHAQLGELELQGMDELS 500
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
SVAREM LTGLSVEEAMGKSLVHDLVYKE EE
Sbjct: 501 SVAREM-----------------------------LTGLSVEEAMGKSLVHDLVYKESEE 531
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
VD LLHHAL+GEEDKNVEIKLRTF ++ KKAVFVVVNACSS+DYTNNIVGVCFVGQDV
Sbjct: 532 TVDKLLHHALQGEEDKNVEIKLRTFDSQQHKKAVFVVVNACSSRDYTNNIVGVCFVGQDV 591
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK+VMDKFIHIQGDYKAIVHSPNPLIPPIFASDENT CSEWNTAMEKLTGWSRGDIIG
Sbjct: 592 TGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSEWNTAMEKLTGWSRGDIIG 651
Query: 780 KMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKR 839
KMLVGE+FGS CRLKGPDALTKFMI LHNA GGQDT+KFPF FD+NGKYVQALLTANKR
Sbjct: 652 KMLVGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDKFPFSFFDQNGKYVQALLTANKR 711
Query: 840 VNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTN 899
VN+EGQI+GAFCFLQIASPELQQAL VQRQQEKKCFAR+KELAYICQEIKNPLSG+ FTN
Sbjct: 712 VNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKELAYICQEIKNPLSGIRFTN 771
Query: 900 SLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVV 959
SLLEATDLTEDQKQ LETSAACEKQM KII+DVDL+SIEDGSLE E+AEFLLGSVINAVV
Sbjct: 772 SLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDGSLELERAEFLLGSVINAVV 831
Query: 960 SQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHV 1019
SQVM+LLRER+LQLIRDIPEE+KTLAVYGDQ RIQQVLADFLLNMVRY+PS +GW+EI V
Sbjct: 832 SQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVLADFLLNMVRYAPSPDGWIEIQV 891
Query: 1020 RPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMN 1079
P LKQ SE ++H EFRMVCPGEGLPP L+QDMFHSSRWMTQEGLGLSMCRKILKL+N
Sbjct: 892 HPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQDMFHSSRWMTQEGLGLSMCRKILKLIN 951
Query: 1080 GEVQYIRESERCYFLIIFELPMPRRGSKSI 1109
GEVQYIRESERCYFLI ELP+PRRGSKS+
Sbjct: 952 GEVQYIRESERCYFLISIELPVPRRGSKSV 981
>gi|57791652|gb|AAW56594.1| phytochrome D [Arabidopsis thaliana]
gi|57791654|gb|AAW56595.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1740 bits (4507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 845/1145 (73%), Positives = 961/1145 (83%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS +T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSRKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
LGVTPT++QI DIVEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRD
Sbjct: 493 SLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+AFLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLIETAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+AMGKSLV +L+YKEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|33333478|gb|AAQ11872.1| phytochrome B [Stellaria longipes]
Length = 1128
Score = 1739 bits (4503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 829/1121 (73%), Positives = 951/1121 (84%), Gaps = 35/1121 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMS-- 75
+++ G+ +++ S T+S+AIAQYT+DARLHAVFEQSGESGKSFDYSQSV+T +
Sbjct: 3 SRNEGSRTNNNNNSNNPSDTMSRAIAQYTIDARLHAVFEQSGESGKSFDYSQSVKTYTSA 62
Query: 76 HSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVP 131
SVPEQQI+AYLSKIQRGG IQPFGC +A+D+ T+R+IAYS+N+ E+LG +VP
Sbjct: 63 ESVPEQQITAYLSKIQRGGLIQPFGCMLAIDDLTYRIIAYSQNSVELLGFITTTTTTAVP 122
Query: 132 NLE--KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHR 189
+LE +Q I+ +GTD+R+LF SSS VLLEKAF AREITLLNP+WIHSK GKPFYAILHR
Sbjct: 123 SLEAVQQRIIAVGTDIRSLFMSSSCVLLEKAFSAREITLLNPVWIHSKANGKPFYAILHR 182
Query: 190 VDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQL 249
+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGD+KLLCDTVVESVRQL
Sbjct: 183 IDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRQL 242
Query: 250 TGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDC 309
YDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDC
Sbjct: 243 AAYDRVMVYKFHEDEHGEVVAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDC 302
Query: 310 HATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG 369
HA + V+QDE L QPLCLVGSTLRAPHGCH+QYMANMGSIASL +AVIINGND+E
Sbjct: 303 HADSVSVVQDERLRQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIINGNDDEG-ST 361
Query: 370 RSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVLRTQTL 403
R+ RLW AFGLQLNMELQL++Q+ EK VLRTQTL
Sbjct: 362 RNAMRLWGLVVCHHTSPRSIPFPLRYACEFLMQAFGLQLNMELQLSAQVLEKRVLRTQTL 421
Query: 404 LCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYH 463
LCDM+LR+SP GIVTQSPSIMDLVKCDGAAL + GKYYPLGVTPTE Q+KDIV+WLL+ H
Sbjct: 422 LCDMILRESPTGIVTQSPSIMDLVKCDGAALLFCGKYYPLGVTPTELQLKDIVQWLLSNH 481
Query: 464 GDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHP 523
GDSTGLSTDSLADAGYP A L DAVCGMAVA+IT+ DFLFWFRSH AKEIKWGGAKHHP
Sbjct: 482 GDSTGLSTDSLADAGYPGALALADAVCGMAVAFITRSDFLFWFRSHPAKEIKWGGAKHHP 541
Query: 524 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVV 583
EDKDD QRM+PRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSF+D E ++SKA+V
Sbjct: 542 EDKDDVQRMNPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDEETTHSKAIV 601
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+ Q D+ +QG+DELSSVA+EMVRLIETA APIFAVD GC+NGWNAK +EL GLSVEEA
Sbjct: 602 HDQAGDVAMQGIDELSSVAKEMVRLIETAMAPIFAVDADGCINGWNAKASELIGLSVEEA 661
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
MGKSLVHDLV ++ + + LL HAL+G+EDKNVEIKL+ FG++ KKAV+VVVNAC SK
Sbjct: 662 MGKSLVHDLVCEDSKNVTQELLLHALQGDEDKNVEIKLKAFGSQQHKKAVYVVVNACCSK 721
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
DYTN IVGVCFVG DVT QK VMDKF++IQGDYKAIVHSP+PLIPPIFASDEN+CC+EWN
Sbjct: 722 DYTNKIVGVCFVGHDVTGQKNVMDKFVNIQGDYKAIVHSPSPLIPPIFASDENSCCTEWN 781
Query: 764 TAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLF 823
TAME LTG+ + D+IGK LVGE+FGS CRLKG D+LTKFM+ LHNA GGQD++KFPF +
Sbjct: 782 TAMEILTGYGKEDVIGKTLVGEIFGSICRLKGHDSLTKFMVVLHNAIGGQDSDKFPFSFY 841
Query: 824 DRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAY 883
+R G+YVQ LLTANKR N++G I GAFCFLQIAS +LQQAL +QRQQE CF R+KELAY
Sbjct: 842 NRGGRYVQGLLTANKRTNIDGHITGAFCFLQIASSDLQQALEIQRQQENVCFERMKELAY 901
Query: 884 ICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLE 943
+CQEIKNPL+G+ F NSLLEAT L EDQKQ +ETS ACEKQ+ KI+ D+ LES+++ E
Sbjct: 902 LCQEIKNPLNGIRFANSLLEATSLGEDQKQFIETSNACEKQIKKILGDIHLESVDESPFE 961
Query: 944 FEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLN 1003
K EF+LG++INAVVSQVM+ LRER LQLIRDIPEEIKTLAV GDQ RIQQ+LA+FL+N
Sbjct: 962 LVKTEFMLGNIINAVVSQVMIPLRERELQLIRDIPEEIKTLAVCGDQIRIQQILAEFLVN 1021
Query: 1004 MVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQ 1063
MVRY+PS +GWVEIHV P LKQ ++G T+ + E+R+V PGEGLPP+LVQDMFH+SRW TQ
Sbjct: 1022 MVRYAPSPDGWVEIHVLPRLKQVADGATVAYIEYRLVSPGEGLPPDLVQDMFHNSRWTTQ 1081
Query: 1064 EGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
EGLGLSMCRKILKLMNGEVQYIRESER YF +I EL MP +
Sbjct: 1082 EGLGLSMCRKILKLMNGEVQYIRESERSYFFVILELRMPPK 1122
>gi|57791670|gb|AAW56603.1| phytochrome D [Arabidopsis thaliana]
gi|57791672|gb|AAW56604.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1738 bits (4502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/1145 (73%), Positives = 962/1145 (84%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IA++E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAIEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEV+AESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVLAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
LGVTPT++QI DIVEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRD
Sbjct: 493 SLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+AFLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLI+TAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIKTATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+AMGKSLV +L+YKEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|15234859|ref|NP_193360.1| phytochrome D [Arabidopsis thaliana]
gi|12644264|sp|P42497.2|PHYD_ARATH RecName: Full=Phytochrome D
gi|2244983|emb|CAB10404.1| phytochrome D [Arabidopsis thaliana]
gi|7268374|emb|CAB78667.1| phytochrome D [Arabidopsis thaliana]
gi|332658321|gb|AEE83721.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1738 bits (4501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 843/1145 (73%), Positives = 961/1145 (83%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
PLGVTPT++QI DIVEWL+ H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRD
Sbjct: 493 PLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+ FLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLIETAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+AMGKSLV +L+YKEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE DL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|452814|emb|CAA54072.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1737 bits (4499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 843/1145 (73%), Positives = 961/1145 (83%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFFMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
PLGVTPT++QI DIVEWL+ H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRD
Sbjct: 493 PLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+ FLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLIETAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+AMGKSLV +L+YKEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE DL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|57791676|gb|AAW56606.1| phytochrome D [Arabidopsis halleri]
Length = 1165
Score = 1737 bits (4499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 844/1131 (74%), Positives = 952/1131 (84%), Gaps = 40/1131 (3%)
Query: 9 QQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYS 68
+Q + S S AQ S + H TES SKAI QYTVDARLHAVFEQSGESGKSFDYS
Sbjct: 30 EQAQSSASKAQRSQNQQPQNHGAGTES--TSKAIQQYTVDARLHAVFEQSGESGKSFDYS 87
Query: 69 QSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLA 126
QS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +I YSENA EMLGL
Sbjct: 88 QSLKTAPYDPSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLM 147
Query: 127 PQSVPNLEK-QEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYA 185
QSVP++E+ E+LTIGTD+R+LF SSS VLLE+AF AREITLLNPIWIHSKNTGKPFYA
Sbjct: 148 SQSVPSIEEISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIHSKNTGKPFYA 207
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVV+S
Sbjct: 208 ILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDS 267
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 268 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 327
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIASLA+A+IINGN+E+
Sbjct: 328 IVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAIIINGNEED 387
Query: 366 A----VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEK 395
GGR++ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 388 GNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRCACEFLMQAFGLQLNMELQLALQVSEK 447
Query: 396 HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 455
VLR QTLLCDMLLRDSP GIVTQ PSIMDLVKC+GAA YQGKYY LGV PTE QI DI
Sbjct: 448 RVLRMQTLLCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDI 507
Query: 456 VEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 515
VEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRDFLFWFRSHT KEIK
Sbjct: 508 VEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIK 567
Query: 516 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
WGGAKHHPEDKDDGQRM PR+SF+AFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++E
Sbjct: 568 WGGAKHHPEDKDDGQRMXPRASFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE 627
Query: 576 ASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAK 631
A +SKA V D+ QG+ E+ +VAREM+RLIETAT PIFAVD+ GC+NGWNAK
Sbjct: 628 AMDSKASAPGGVQPHGDDMAEQGLQEIGTVAREMIRLIETATVPIFAVDIDGCINGWNAK 687
Query: 632 VAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKK 691
+AELTGLSVEEAMGKSLV DL+YKEYEE D LL ALKG+E KNVE+KL+TF E + K
Sbjct: 688 IAELTGLSVEEAMGKSLVRDLIYKEYEETADRLLSCALKGDEGKNVEVKLKTFAPELQGK 747
Query: 692 AVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIF 751
AVFVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIF
Sbjct: 748 AVFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIF 807
Query: 752 ASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFG 811
A+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGSCCRLKGPDALTKFMI LHNA G
Sbjct: 808 AADENTCCIEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVLHNAIG 867
Query: 812 GQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQE 871
GQ+T+KFPFP FDR GK++QALLT NKRV+++G+I+GAFCFLQI SPELQQAL VQR+QE
Sbjct: 868 GQETDKFPFPFFDREGKFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQE 927
Query: 872 KKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKD 931
+ F+R KELAYI Q IKNPLSG+ FTNSLLEATDL EDQKQLLETS +CEKQ+ KI+ +
Sbjct: 928 SEYFSRRKELAYIFQFIKNPLSGLRFTNSLLEATDLNEDQKQLLETSVSCEKQISKIVGE 987
Query: 932 VDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQA 991
+D+ SI DGS E+ EF +GSVINAVVSQV+ ++RERN+QLIR+IP EIK++AVYGDQ
Sbjct: 988 MDVISIGDGSFLLERTEFFIGSVINAVVSQVIFVVRERNIQLIRNIPAEIKSMAVYGDQI 1047
Query: 992 RIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELV 1051
R+QQVLA+FLL++VRY+P EG VE+H+ P LKQ ++G + + EFRM C GEG+PPE V
Sbjct: 1048 RLQQVLAEFLLSIVRYAP-LEGSVELHLCPVLKQMADGFSAIRLEFRMACAGEGVPPEKV 1106
Query: 1052 QDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
QDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+ ELP+P
Sbjct: 1107 QDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIELPVP 1157
>gi|57791674|gb|AAW56605.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1736 bits (4495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 843/1145 (73%), Positives = 960/1145 (83%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDV I+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVEILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVT PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTXRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
LGVTPT++QI DIVEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRD
Sbjct: 493 SLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+AFLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLIETAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+AMGKSLV +L+YKEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|57791650|gb|AAW56593.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1736 bits (4495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/1145 (73%), Positives = 959/1145 (83%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
LGVTPT++QI DIVEWLL H DSTGLSTDSL D GYP+AA LGDAVCGMAVA ITKRD
Sbjct: 493 SLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDGGYPRAAALGDAVCGMAVACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+ FLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLIETAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+AMGKSLV +L+YKEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPI A+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPILAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|57791662|gb|AAW56599.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1734 bits (4492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/1145 (73%), Positives = 960/1145 (83%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NM SIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMCSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
LG+TPT++QI DIVEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRD
Sbjct: 493 SLGMTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+AFLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLIETAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVXQGMQEIGAVAREMVRLIETATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+AMGKSLV +L+YKEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KF FP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFSFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSIAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|57791664|gb|AAW56600.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1734 bits (4490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/1145 (73%), Positives = 959/1145 (83%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
LGVTPT++QI DIVEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRD
Sbjct: 493 SLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+AFLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLI TAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIXTATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+A GKSLV +L+ KEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAXGKSLVRELISKEYKETVDRLLSSALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|57791648|gb|AAW56592.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1734 bits (4490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 841/1144 (73%), Positives = 958/1144 (83%), Gaps = 47/1144 (4%)
Query: 3 SNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAVF 55
S+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAVF
Sbjct: 16 SSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAVF 73
Query: 56 EQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVI 113
EQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +I
Sbjct: 74 EQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTII 133
Query: 114 AYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPI 172
YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNPI
Sbjct: 134 GYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPI 193
Query: 173 WIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPG 232
WIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 194 WIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPS 253
Query: 233 GDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQ 292
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQ
Sbjct: 254 GDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQ 313
Query: 293 ASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIAS 352
ASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIAS
Sbjct: 314 ASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIAS 373
Query: 353 LALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQL 382
LA+AVIINGN+E+ GGR++ RLW AFGLQL
Sbjct: 374 LAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQL 433
Query: 383 NMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYP 442
NMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 434 NMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYS 493
Query: 443 LGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDF 502
LGVTPT++QI DIVEWLL H DSTGLSTDSL D GYP+AA LGDAVCGMAVA ITKRDF
Sbjct: 494 LGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDGGYPRAAALGDAVCGMAVACITKRDF 553
Query: 503 LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHS 562
LFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PR SF+ FLEVVKSR PW+ AEMDAIHS
Sbjct: 554 LFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRCSFQTFLEVVKSRCQPWETAEMDAIHS 613
Query: 563 LQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
LQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLIETAT PIFA
Sbjct: 614 LQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFA 673
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD+ GC+NGWNAK+AELTGLSVE+AMGKSLV +L+YKEY+E VD LL ALKG+E KNVE
Sbjct: 674 VDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNVE 733
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYKA
Sbjct: 734 VKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKA 793
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDA 798
I+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPDA
Sbjct: 794 IIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPDA 853
Query: 799 LTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASP 858
LTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI SP
Sbjct: 854 LTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSP 913
Query: 859 ELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETS 918
ELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLETS
Sbjct: 914 ELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETS 973
Query: 919 AACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIP 978
+CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+IP
Sbjct: 974 VSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIP 1033
Query: 979 EEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EFR
Sbjct: 1034 TEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEFR 1092
Query: 1039 MVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFE 1098
M C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+ E
Sbjct: 1093 MACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIE 1152
Query: 1099 LPMP 1102
LP+P
Sbjct: 1153 LPVP 1156
>gi|57791656|gb|AAW56596.1| phytochrome D [Arabidopsis thaliana]
gi|57791658|gb|AAW56597.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1733 bits (4488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 841/1145 (73%), Positives = 960/1145 (83%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+F EDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFREDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+ + V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASAVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
LGVTPT++QI DIVEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMA+A ITKRD
Sbjct: 493 SLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAIACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+AFLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLIETAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+A+GKSLV +L+YKEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAIGKSLVRELIYKEYKETVDRLLSSALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|57791666|gb|AAW56601.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1733 bits (4488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/1145 (73%), Positives = 959/1145 (83%), Gaps = 47/1145 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
LGVTPT++QI DIVEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKRD
Sbjct: 493 SLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+AFLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLIETAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+A+GKSLV +L+ KEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDALGKSLVRELISKEYKETVDRLLSSALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
E+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 EVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLI PIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLILPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIF 1097
RM C GEG+PPE VQDMFHSSRW EGLGLS+CRKILKLMNG VQYIRE ER YFLI+
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWTXPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVI 1151
Query: 1098 ELPMP 1102
ELP+P
Sbjct: 1152 ELPVP 1156
>gi|293336623|ref|NP_001168077.1| phytochromeB2 [Zea mays]
gi|37926881|gb|AAP06789.1| phytochrome B2 apoprotein [Zea mays]
gi|413955930|gb|AFW88579.1| phytochromeB2 [Zea mays]
Length = 1166
Score = 1727 bits (4473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/1105 (74%), Positives = 943/1105 (85%), Gaps = 38/1105 (3%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKA+AQY +DARLHAVFEQSG SG+SFDYSQS+R EQQI+AYLS+IQRGGHI
Sbjct: 51 SVSKAVAQYNLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHI 110
Query: 97 QPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIGTDVRTLFTSS 152
QP GCT+AV D+++FR++A+SENA ++L L+P SVP+L+ + +++G D R F+ S
Sbjct: 111 QPLGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSVALPPVSLGADARLYFSPS 170
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+VLLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAG
Sbjct: 171 SAVLLERAFAAREISLLNPLWIHSRASSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 230
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQSQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVY+FHEDEHGEVVAES
Sbjct: 231 AVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHEDEHGEVVAES 290
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHA P+ VIQD GL Q LCLVGST
Sbjct: 291 RRDNLEPYLGLHYPATDIPQASRFLFQQNRVRMIADCHAIPVRVIQDPGLSQQLCLVGST 350
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGG---RSTTRLW------------ 376
LRAPHGCHAQYMANMGSIASL +AVII+ G D+E G S+ +LW
Sbjct: 351 LRAPHGCHAQYMANMGSIASLVMAVIISSGGDDERTGRGAISSSMKLWGLVVCHHTSPRC 410
Query: 377 --------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSPAGI+TQSPS
Sbjct: 411 IPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPAGIITQSPS 470
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
+MDLVKCDGAALYY+GKYYPLGVTPTE+QIKDI+EWL HGDSTGLSTDSLADAGY A
Sbjct: 471 VMDLVKCDGAALYYRGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGA 530
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL
Sbjct: 531 VALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 590
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDEL 598
EVVKSRSL W+NAEMDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G++EL
Sbjct: 591 EVVKSRSLSWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQRQLGELELRGINEL 650
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV+DL++KE +
Sbjct: 651 SSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKECD 710
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
+IV+ LL AL+GEEDKNVEIKL+TFG+E K A+FV+VNACSS+DYT NIVGVCFVGQD
Sbjct: 711 DIVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGAIFVIVNACSSRDYTQNIVGVCFVGQD 770
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
VT QK+VMDKFI+IQGDYKAIVH+PNPL+PPIFASDENT CSEWNTAMEKLTGWSR +++
Sbjct: 771 VTGQKVVMDKFINIQGDYKAIVHNPNPLLPPIFASDENTSCSEWNTAMEKLTGWSREEVV 830
Query: 779 GKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
GK L+GEVFG+CCRLKGPDALTKFM+ +HNA G D+EKFPF FD+NGKYVQALLTAN
Sbjct: 831 GKFLIGEVFGNCCRLKGPDALTKFMVVIHNAIEGHDSEKFPFSFFDKNGKYVQALLTANT 890
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
R M+G+ +GAFCFLQIAS E+QQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+ FT
Sbjct: 891 RSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFT 950
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
NSLL+ TDL +DQ+Q LETS+ACEKQM KI+KD L+SIEDGSL EK+EF LG V+NAV
Sbjct: 951 NSLLQMTDLNDDQRQFLETSSACEKQMSKIVKDASLKSIEDGSLVLEKSEFSLGDVMNAV 1010
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
VSQ M LLRER+LQLIRDIP+EIK + YGDQ RIQQVLADFLL+M + +PS GWVEI
Sbjct: 1011 VSQTMSLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMAQSAPSENGWVEIQ 1070
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
VRP +KQ+ +G FR CPGEGLP ++VQDMF +S+W TQEG+GLS CRKILKLM
Sbjct: 1071 VRPNVKQNYDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLM 1130
Query: 1079 NGEVQYIRESERCYFLIIFELPMPR 1103
GEVQYIRESER +FLI+ ELP PR
Sbjct: 1131 GGEVQYIRESERSFFLIVLELPQPR 1155
>gi|57791660|gb|AAW56598.1| phytochrome D [Arabidopsis thaliana]
Length = 1126
Score = 1679 bits (4347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 816/1115 (73%), Positives = 933/1115 (83%), Gaps = 47/1115 (4%)
Query: 2 ASNSQHQQQHRRSQSAAQSSGTSNIRA-------HHNATESMTVSKAIAQYTVDARLHAV 54
AS+ + +H + AQSS +R+ H TES +KAI QYTVDARLHAV
Sbjct: 15 ASSGHRRSRHTSAAEQAQSSANKALRSQNQQPQNHGGGTES--TNKAIQQYTVDARLHAV 72
Query: 55 FEQSGESGKSFDYSQSVRTMSH--SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRV 112
FEQSGESGKSFDYSQS++T + SVPEQQI+AYLS+IQRGG+ QPFGC IAV+E+TF +
Sbjct: 73 FEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTI 132
Query: 113 IAYSENAGEMLGLAPQSVPNLE-KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNP 171
I YSENA EMLGL QSVP++E K E+LTIGTD+R+LF SSS +LLE+AF AREITLLNP
Sbjct: 133 IGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNP 192
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
IWIHS NTGKPFYAILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLP
Sbjct: 193 IWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLP 252
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GDIKLLCDTVVESVR LTGYDRVMVY+F EDEHGEVVAESKR DLEPY GLHYPATDIP
Sbjct: 253 SGDIKLLCDTVVESVRDLTGYDRVMVYKFREDEHGEVVAESKRNDLEPYIGLHYPATDIP 312
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDC+A+ + V+QD+ L Q +CLVGSTLRAPHGCHAQYM NMGSIA
Sbjct: 313 QASRFLFKQNRVRMIVDCYASAVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIA 372
Query: 352 SLALAVIINGNDEEA----VGGRSTTRLW--------------------------AFGLQ 381
SLA+AVIINGN+E+ GGR++ RLW AFGLQ
Sbjct: 373 SLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQ 432
Query: 382 LNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYY 441
LNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY
Sbjct: 433 LNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYY 492
Query: 442 PLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRD 501
LGVTPT++QI DIVEWLL H DSTGLSTDSL DAGYP+AA LGDAVCGMA+A ITKRD
Sbjct: 493 SLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAIACITKRD 552
Query: 502 FLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIH 561
FLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+AFLEVVKSR PW+ AEMDAIH
Sbjct: 553 FLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIH 612
Query: 562 SLQLILRDSFRDAEASNSKAV----VNAQLVDLELQGVDELSSVAREMVRLIETATAPIF 617
SLQLILRDSF+++EA +SKA V D+ QG+ E+ +VAREMVRLIETAT PIF
Sbjct: 613 SLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIF 672
Query: 618 AVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNV 677
AVD+ GC+NGWNAK+AELTGLSVE+A+GKSLV +L+YKEY+E VD LL ALKG+E KNV
Sbjct: 673 AVDIDGCINGWNAKIAELTGLSVEDAIGKSLVRELIYKEYKETVDRLLSXALKGDEGKNV 732
Query: 678 EIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYK 737
+KL+TFG+E + KA+FVVVNACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYK
Sbjct: 733 XVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYK 792
Query: 738 AIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPD 797
AI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGS CRLKGPD
Sbjct: 793 AIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPD 852
Query: 798 ALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIAS 857
ALTKFMI LHNA GGQDT+KFPFP FDR G+++QALLT NKRV+++G+I+GAFCFLQI S
Sbjct: 853 ALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPS 912
Query: 858 PELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLET 917
PELQQAL VQR+QE + F+R KELAYI Q IKNPLSG+ FTNSLLE TDL EDQKQLLET
Sbjct: 913 PELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLET 972
Query: 918 SAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDI 977
S +CEKQ+ KI+ D+D++SI+DGS E+ EF +G+V NAVVSQVM+++RERNLQLIR+I
Sbjct: 973 SVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNI 1032
Query: 978 PEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEF 1037
P E+K++AVYGDQ R+QQVLA+FLL++VRY+P EG VE+H+ PTL Q ++G + V EF
Sbjct: 1033 PTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAP-MEGSVELHLCPTLNQMADGFSAVRLEF 1091
Query: 1038 RMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCR 1072
RM C GEG+PPE VQDMFHSSRW + EGLGLS+CR
Sbjct: 1092 RMACAGEGVPPEKVQDMFHSSRWPSPEGLGLSVCR 1126
>gi|224285845|gb|ACN40636.1| unknown [Picea sitchensis]
Length = 1132
Score = 1671 bits (4327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 802/1137 (70%), Positives = 945/1137 (83%), Gaps = 37/1137 (3%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MASNS+H Q +QS+G++N R+ N + + A+AQY DARL VFEQSGE
Sbjct: 1 MASNSRHTQ--------SQSTGSNNRRSSINTNTTTNKATAMAQYNADARLLQVFEQSGE 52
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
SGKSFDY++S+++ + SVPEQQI+AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA
Sbjct: 53 SGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAV 112
Query: 121 EMLGLAPQSVPNLEKQ--EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKN 178
EML LAPQSVP++E+ E+LTIGTDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN
Sbjct: 113 EMLDLAPQSVPSMEQPQLEVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKN 172
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+ KPFYAI+HR+DVG+VID EP +T D +S AGAVQSQKLAVRAIS+LQSLP GDI+LL
Sbjct: 173 SRKPFYAIVHRIDVGMVIDFEPLKTGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELL 232
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CD+VVE+VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF
Sbjct: 233 CDSVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLF 292
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
QNRVRMI DC ATP+ VIQ E LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI
Sbjct: 293 MQNRVRMICDCMATPVQVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVI 352
Query: 359 INGNDEEAVG-GRSTTRLW--------------------------AFGLQLNMELQLASQ 391
INGND+E G GR++ +LW AFGLQLNMELQLA+Q
Sbjct: 353 INGNDDEGAGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQ 412
Query: 392 LSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQ 451
L+EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE Q
Sbjct: 413 LTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQ 472
Query: 452 IKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTA 511
IKDI +WLL +HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTA
Sbjct: 473 IKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTA 532
Query: 512 KEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSF 571
KE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF
Sbjct: 533 KEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSF 592
Query: 572 RDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAK 631
+D + S +K +V+++L DL LQG+DELSSVA EMVRLIETATAPI AVD +G VN WNAK
Sbjct: 593 QDIDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNVWNAK 652
Query: 632 VAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKK 691
VAELTGL V EAMG SLV DLV++E E V +L +A++GEE+KNVE+ LRTFG + +K+
Sbjct: 653 VAELTGLPVGEAMGMSLVQDLVFEESVERVKKMLCNAIRGEEEKNVEMILRTFGPQKQKE 712
Query: 692 AVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIF 751
AVF+VVNACSS+D+TNNIVGVCFVGQDVT QK+VMDKFI IQGDY++IV +PNPLIPPIF
Sbjct: 713 AVFLVVNACSSRDFTNNIVGVCFVGQDVTGQKVVMDKFIRIQGDYRSIVQNPNPLIPPIF 772
Query: 752 ASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFG 811
ASDE+ CCSEWN AME +TGW+R ++IGKMLVGE+FG CCRLKG DA+TKF I LH+A
Sbjct: 773 ASDESACCSEWNAAMENVTGWARDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSAID 832
Query: 812 GQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQE 871
G + EKFPF FD+ GKYV+ALLTANKR + +G+I G+FCFLQIAS EL+QAL VQRQQE
Sbjct: 833 GHEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELRQALEVQRQQE 892
Query: 872 KKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKD 931
KKCFARLKELAYI QEIKNPL G+ FT LLE TDL++DQKQ +ETSA CE+QM K+I D
Sbjct: 893 KKCFARLKELAYIRQEIKNPLYGMMFTRKLLEETDLSDDQKQFVETSAVCERQMQKVIDD 952
Query: 932 VDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQA 991
+DL+S+EDG +E + AEF+LG+VI+AVVSQ M++LRE+ LQLIR+IP E+KT+ +YGDQ
Sbjct: 953 MDLDSLEDGYMELDTAEFILGTVIDAVVSQGMIILREKGLQLIREIPGEVKTMHLYGDQV 1012
Query: 992 RIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELV 1051
R+QQ+LADFLLN +R++PS EGWV I V PTLKQ S +V EFR+ PG GLP ELV
Sbjct: 1013 RLQQILADFLLNALRFTPSPEGWVAIKVLPTLKQLSGALHVVLLEFRITHPGPGLPAELV 1072
Query: 1052 QDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSKS 1108
QD+F SRW TQEG+GLSMCRK+LKLMNG+VQY+RES +CYFL+ ELP+ +R S
Sbjct: 1073 QDLFDRSRWTTQEGVGLSMCRKLLKLMNGDVQYVRESGKCYFLVNVELPLAQREDAS 1129
>gi|2499557|sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome
gi|1237084|emb|CAA65510.1| phytochrome [Pinus sylvestris]
Length = 1131
Score = 1630 bits (4221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 791/1133 (69%), Positives = 931/1133 (82%), Gaps = 38/1133 (3%)
Query: 1 MASNSQHQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGE 60
MASNS+H Q +QS+G++N R+ N + + A+AQY DARL VFEQSGE
Sbjct: 1 MASNSRHTQ--------SQSTGSNNRRSSTNTNTTTNKATAMAQYNSDARLLQVFEQSGE 52
Query: 61 SGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAG 120
SGKSFDY++S++ + +VPEQQI+AYLS+IQRGG IQPFGC +AV+E TFR+IAYSEN
Sbjct: 53 SGKSFDYTRSIQVHNRAVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENE- 111
Query: 121 EMLGLAPQSVPNLEK--QEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKN 178
EML L QSVP++EK Q++LTIGTDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN
Sbjct: 112 EMLDLGAQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKN 171
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+ KPFYAI+HR+DVG+VIDLEP RT D +S AGAVQSQKLAVRAIS+LQSLP GD+ LL
Sbjct: 172 SRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLL 231
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDTVVE+VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF
Sbjct: 232 CDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLF 291
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
QNRVRMI DC ATP+ VIQ E LMQPLCLVGST APHGCHAQYMANMGSI SL +AVI
Sbjct: 292 MQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTPSAPHGCHAQYMANMGSIRSLLMAVI 351
Query: 359 INGNDEEAVG-GRSTTRLW--------------------------AFGLQLNMELQLASQ 391
INGND+E G GR++ +LW A GLQLNMELQLA+Q
Sbjct: 352 INGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQ 411
Query: 392 LSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQ 451
L+EKH+LRTQTLLCDMLLRD+P GIVTQSPSI DLVKCDGAALYY G + LGVTPTE Q
Sbjct: 412 LTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQ 471
Query: 452 IKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTA 511
IKDI +WLL +HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTA
Sbjct: 472 IKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTA 531
Query: 512 KEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSF 571
KE+KWGGAKHHP+DKDD +RMHPRSSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF
Sbjct: 532 KEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRCSF 591
Query: 572 RDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAK 631
RD + S +K +V+++L L LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAK
Sbjct: 592 RDIDDSGTKTMVHSRLNYLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAK 651
Query: 632 VAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKK 691
VAELTGL V EAMG SLV DLV+++ E V+ +LH+AL+GEE+KNVE+ L+TFG + K+
Sbjct: 652 VAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKE 711
Query: 692 AVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIF 751
AV +VVNACSS+D+T+NIVGVCFVGQDVT QK+VMDKFI IQGDY++IV SPNPLIPPIF
Sbjct: 712 AVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIF 771
Query: 752 ASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFG 811
ASDE CCSEWN AMEK+TGW+ ++IGKMLVGE+FG CCRLKG DA+TKF I LH
Sbjct: 772 ASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHQCNH 831
Query: 812 GQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQE 871
GQ+ EKFPF FD+ GKYV+ALLTANKR + +G+I G+FCF +IAS ELQ AL VQRQQE
Sbjct: 832 GQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFFRIASSELQHALEVQRQQE 891
Query: 872 KKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKD 931
KKCFARLKELAYI QEIKNPL G+ FT LLE TDL++DQKQ +ETSA CE+QM K++ D
Sbjct: 892 KKCFARLKELAYIRQEIKNPLYGMMFTRKLLEETDLSDDQKQFVETSAVCERQMQKVMDD 951
Query: 932 VDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQA 991
+DLES+EDG +E + AEF+LG+VI+AVVSQ M++LRE+ LQLIR+IP E+KT+ +YGD+
Sbjct: 952 MDLESLEDGYMELDTAEFILGTVIDAVVSQGMIVLREKGLQLIREIPGEVKTMRLYGDEV 1011
Query: 992 RIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELV 1051
+IQQ+LADFLLN++R++PS EGWV I V PTLKQ G +VH EFR+ PG GLP ELV
Sbjct: 1012 KIQQILADFLLNVLRFTPSPEGWVAIKVFPTLKQLGGGLHVVHLEFRITHPGLGLPAELV 1071
Query: 1052 QDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
QD+F S+W TQEG+GLSMCRK+LKLMNG+V+YIRES CYFL+ E PM +R
Sbjct: 1072 QDLFDRSQWATQEGVGLSMCRKLLKLMNGDVRYIRESGICYFLVNVEFPMAQR 1124
>gi|13429830|dbj|BAB39687.1| phytochrome [Marchantia paleacea subsp. diptera]
Length = 1126
Score = 1519 bits (3934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 737/1123 (65%), Positives = 883/1123 (78%), Gaps = 50/1123 (4%)
Query: 20 SSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV---RTMSH 76
SSG+S H S I Q T DA+L AVFE+SGESG SFDY++S+ ++
Sbjct: 9 SSGSSAKSKH---------SVRIVQTTADAKLQAVFEESGESGDSFDYTKSINASKSTGE 59
Query: 77 SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ 136
SVP Q ++AYL ++QRGG Q FGC +AV+E TFRV+AYSENA EML L PQ+VP + +Q
Sbjct: 60 SVPAQAVTAYLQRMQRGGLTQTFGCMLAVEELTFRVLAYSENAPEMLDLMPQAVPCVGQQ 119
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
++L IGTD RTLF S+S+V LEKA GA ++++ NPI + K++GKPFYAI+HR+D G+VI
Sbjct: 120 DVLGIGTDARTLFNSASAVALEKAAGALDVSMFNPISVQCKSSGKPFYAIVHRIDAGLVI 179
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D+EP R DP++S AGA+QS KLA +AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVM
Sbjct: 180 DIEPVRPSDPSVSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVM 239
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC A P+ V
Sbjct: 240 AYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAQPVQV 299
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG------GR 370
IQD+ L QPL L GSTLRAPHGCHAQYM NMGSIASL +AVIIN NDEE GR
Sbjct: 300 IQDKELRQPLSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINVNDEEYSSRGYHHKGR 359
Query: 371 STTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLL 404
+LW FGLQLNME++LA+QL EK +LRTQTLL
Sbjct: 360 ---KLWGLVVCHHTTPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKRILRTQTLL 416
Query: 405 CDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG 464
CDMLLRD+P GIV+QSP+IMDLVKCDGAALYY +Y+ LG TPTE QIKDI +WLL YH
Sbjct: 417 CDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRYWVLGTTPTELQIKDIADWLLEYHK 476
Query: 465 DSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 524
DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+
Sbjct: 477 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHDPD 536
Query: 525 DKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVN 584
DKDDG++MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR SF+D + S++K +++
Sbjct: 537 DKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIH 596
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
A+L DL+LQG+DELS+VA EMVRLIETATAPI AVD G +NGWNAKVAELTGL V EAM
Sbjct: 597 ARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVSEAM 656
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
G+SLV DL +E E V+ LL+ AL+GEE++NVEIKL+T+GA+ K AV ++VNACSS+D
Sbjct: 657 GRSLVKDLALEESVETVERLLYLALQGEEEQNVEIKLQTYGAQKDKGAVILIVNACSSRD 716
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNT 764
T N+VGVCFVGQDVT QK+VMDKF IQGDYKAIV +PNPLIPPIF SDE CSEWN
Sbjct: 717 VTENVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGSDEFGYCSEWNP 776
Query: 765 AMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFP 821
AMEKL GW R ++IGKMLVGE+FG+ CCRLKG DA+TKFMI L++A GQD+EKFPF
Sbjct: 777 AMEKLAGWKREEVIGKMLVGEIFGTQMMCCRLKGQDAMTKFMIVLNSAMDGQDSEKFPFA 836
Query: 822 LFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKEL 881
FDR GK+V+ALLTANKR + EG G FCFLQIAS EL QALTVQR EK F++LKEL
Sbjct: 837 FFDRQGKFVEALLTANKRTDSEGAFTGVFCFLQIASMELLQALTVQRATEKVAFSKLKEL 896
Query: 882 AYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS 941
AYI QEIKNPL G+ FT +L+E T+LTE+QKQ +ETSA CE+Q+ +I+ D+DLESIEDG
Sbjct: 897 AYIRQEIKNPLYGIMFTRNLVEDTNLTEEQKQFIETSALCERQLRRILDDMDLESIEDGY 956
Query: 942 LEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFL 1001
LE + AEF++G+V++AV+SQ M+ RE+ LQLI D P + K L ++GDQ R+QQVLADFL
Sbjct: 957 LELDTAEFIMGTVMDAVISQGMITSREKGLQLIWDTPRDTKNLCLFGDQVRLQQVLADFL 1016
Query: 1002 LNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWM 1061
LN +R++PS+EGWV I + + G +VH EFR+ PG GLP ELVQ+MF R M
Sbjct: 1017 LNAIRFTPSSEGWVGIKGVSSRHRQGGGVHVVHFEFRVTHPGAGLPEELVQEMFDRGRGM 1076
Query: 1062 TQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
TQEGLGL+MCRK+LKLM+G+VQYIRE+ +CYFL+ ELP+ +R
Sbjct: 1077 TQEGLGLNMCRKLLKLMSGDVQYIREAGKCYFLVNVELPIAQR 1119
>gi|302818893|ref|XP_002991119.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
gi|300141213|gb|EFJ07927.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
Length = 1143
Score = 1502 bits (3889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 721/1132 (63%), Positives = 887/1132 (78%), Gaps = 56/1132 (4%)
Query: 20 SSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV---RTMSH 76
SSG+S H S +AQ T DA+LHAV+E+SGESG SFDY++SV ++
Sbjct: 9 SSGSSAKSKH---------SVRVAQTTADAKLHAVYEESGESGDSFDYTKSVNATKSTGE 59
Query: 77 SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-- 134
S+P Q ++AYL ++QRGG +QPFGC +AV+E +FRVIA+S+NAGEML L PQSVP+L
Sbjct: 60 SIPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGAG 119
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+Q++L IG+D R+LFT +S+ LEKA GA ++++LNPI +H K + KPFYAI+HR+DVG+
Sbjct: 120 QQDLLGIGSDARSLFTPASASALEKAAGAIDVSMLNPISVHCKTSAKPFYAIVHRIDVGL 179
Query: 195 VIDLEPARTEDPAL-SIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
V+DLEP + D ++ S AGA+QS KLA +AIS+LQSLPGGDI LLCDTVVE VR+LTGYD
Sbjct: 180 VLDLEPVKASDTSVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYD 239
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVM Y+FH+DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC A P
Sbjct: 240 RVMAYKFHDDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAAP 299
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-------- 365
+ + QD+ L QP+ L GSTLRAPHGCHAQYM NMGS+ASL +AVIIN ND+E
Sbjct: 300 VKISQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSSGGG 359
Query: 366 ----AVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEK 395
+ +LW FGLQLNME++LA+QL EK
Sbjct: 360 GGGGGAYQQKGRKLWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREK 419
Query: 396 HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 455
H+LRTQTLLCDMLLRD+P GIV+QSP+IMDLVKCDGAALYY +++ LGVTP+E QIKDI
Sbjct: 420 HILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGVTPSEAQIKDI 479
Query: 456 VEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 515
+WLL +H DSTGLSTDSLADAGYP AA+LGD VCGMA A IT +DFLFWFRSHTAKEIK
Sbjct: 480 ADWLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEIK 539
Query: 516 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
WGGAKH P+DKDDG++MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR SF D +
Sbjct: 540 WGGAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHDID 599
Query: 576 ASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAEL 635
S++K +++A+L DL+LQG+DELS+VA EMVRLIETATAPI AVD G +NGWNAKVAEL
Sbjct: 600 DSDTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAEL 659
Query: 636 TGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFV 695
TGL V EAMG+SL DLV +E ++V+ LL+ AL+G+E++NVE+KL+TFG + K+AV +
Sbjct: 660 TGLPVTEAMGRSLAKDLVLQESADMVERLLYLALQGDEEQNVELKLKTFGVQKDKEAVIL 719
Query: 696 VVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDE 755
VVNAC+S+D ++N+VGVCFVGQDVT QK+VMDKF IQGDYKAIV +PNPLIPPIF +DE
Sbjct: 720 VVNACASRDVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADE 779
Query: 756 NTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGG 812
CSEWN AMEKL+GW R +++GKMLVGE+FG CRLKG DA+TKFMI L++A G
Sbjct: 780 FGYCSEWNPAMEKLSGWKREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADG 839
Query: 813 QDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEK 872
QDTEKFPF FDR GKYV+ALLTA KR + EG I G FCFL IAS ELQQALTVQR EK
Sbjct: 840 QDTEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEK 899
Query: 873 KCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDV 932
++LKELAYI QEIKNPL G+ FT +L+E TDL+EDQKQ +ET A CEKQ+ KI+ D+
Sbjct: 900 VALSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDM 959
Query: 933 DLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQAR 992
DLESIEDG LE + EF++G+V++AV+SQ M+ +E+NLQLIR+ P+EIK + +YGDQ R
Sbjct: 960 DLESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVR 1019
Query: 993 IQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQ 1052
+QQVLADFLLN +R++PS+E WV I V + K+ G ++H EFR+ PG GLP ELVQ
Sbjct: 1020 LQQVLADFLLNAIRFTPSSENWVGIKVATSRKRLGGGVHVMHLEFRITHPGVGLPEELVQ 1079
Query: 1053 DMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
+MF R MTQEGLGLSMCRK++KLMNGEV+Y+RE + +FL+ ELP+ +R
Sbjct: 1080 EMFDRGRGMTQEGLGLSMCRKLVKLMNGEVEYLREPGKNFFLVSLELPLAQR 1131
>gi|168042146|ref|XP_001773550.1| phytochrome 4 [Physcomitrella patens subsp. patens]
gi|139001628|dbj|BAF51710.1| phytochrome4 [Physcomitrella patens]
gi|162675089|gb|EDQ61588.1| phytochrome 4 [Physcomitrella patens subsp. patens]
Length = 1126
Score = 1501 bits (3886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/1122 (64%), Positives = 884/1122 (78%), Gaps = 44/1122 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV---RTM 74
A SSG+S +++ H S +AQ T DA+L AV+E+SG+SG SFDYS+SV ++
Sbjct: 7 AYSSGSS-VKSKH--------SVRVAQTTADAKLQAVYEESGDSGDSFDYSKSVHASKST 57
Query: 75 SHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
+VP ++AYL ++QRGG +Q FGC + VDE++FRVIAYSENA EML L PQ+VP++
Sbjct: 58 GENVPALAVTAYLQRMQRGGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSVG 117
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+QE+L IGTD RTLFT SS+ LEK GA ++T+LNPI +H +++GKPFYAILHR+DVG+
Sbjct: 118 QQEVLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGL 177
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
VID EP R D +S AGA+QS KLA +AIS+LQ+LPGGDI LLCDTVVE VRQL+GYDR
Sbjct: 178 VIDFEPVRPNDAVVSSAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYDR 237
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC+A P+
Sbjct: 238 VMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPPV 297
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE--AVGGRST 372
V+QD+ L QP+ L GSTLRAPHGCHAQYM NM SIASL +AVI+N DE+ + GG+
Sbjct: 298 KVVQDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQR 357
Query: 373 TR-LWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
R LW FGLQLNME++LA+QL EKH+LRTQTLLC
Sbjct: 358 GRKLWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLC 417
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DMLLRD+P GIV+QSP+IMDLVKCDGAALYY +++ LG+TP E QIK+I +WLL +H D
Sbjct: 418 DMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWLLEHHQD 477
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSLADAGYP AA LGDAVCGMA A IT RDFLFWFRSHTAKEIKWGGAKH P++
Sbjct: 478 STGLSTDSLADAGYPGAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPDE 537
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNA 585
KDDG++MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR SF+D + S++K +++A
Sbjct: 538 KDDGRKMHPRSSFKAFLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHA 597
Query: 586 QLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMG 645
+L DL+LQG+DELS+VA EMVRLIETATAPI AVD G +NGWNAKVAELTGL V EAMG
Sbjct: 598 RLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGEAMG 657
Query: 646 KSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDY 705
+SLV DL+ +E ++V LL+ AL+GEE++N+EI+L+TFG + K AV ++VNACSS+D
Sbjct: 658 RSLVKDLILEESIDVVQRLLYLALQGEEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDV 717
Query: 706 TNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTA 765
+N+VGVCFVGQDVT QK V+DKF IQGDYKAIV +PNPLIPPIF +DE CSEWN +
Sbjct: 718 QDNVVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPS 777
Query: 766 MEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPL 822
MEKLTGW R +++GK+LVGE+FG CCRLKG DA+TKFMIAL++A GQDT++FPF
Sbjct: 778 MEKLTGWKREEVLGKLLVGEIFGMQLMCCRLKGQDAMTKFMIALNSAMDGQDTDRFPFSF 837
Query: 823 FDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELA 882
FDR GKYV ALLT NKR + EG I G FCFL S EL QALTVQR EK FA+LKELA
Sbjct: 838 FDRQGKYVDALLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVAFAKLKELA 897
Query: 883 YICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSL 942
YI QEIKNPL G+ FT +L+E TDL+EDQ+Q +ETSA CE+Q+ K++ D+DLESIEDG L
Sbjct: 898 YIRQEIKNPLYGIMFTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIEDGYL 957
Query: 943 EFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLL 1002
E + EF++G+V++AVVSQ M+ RE+ LQLIR+ P EIK + ++GDQ R+QQVLADFLL
Sbjct: 958 ELDTNEFVMGTVMDAVVSQGMITSREKGLQLIRETPREIKNMCLFGDQVRLQQVLADFLL 1017
Query: 1003 NMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT 1062
N VR++PS+EGWV I V PT K+ G ++H EFR+ G GLP ELV +MF R MT
Sbjct: 1018 NAVRFTPSSEGWVGIKVVPTKKRLGGGIHVMHLEFRVTHSGMGLPEELVHEMFDRGRGMT 1077
Query: 1063 QEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
QEGLGLSMCRK++KLMNG VQYIRE+ + YFL+ ELP+ +R
Sbjct: 1078 QEGLGLSMCRKLVKLMNGNVQYIRETGKSYFLVEVELPLAQR 1119
>gi|302819945|ref|XP_002991641.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
gi|300140490|gb|EFJ07212.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
Length = 1142
Score = 1501 bits (3885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/1131 (63%), Positives = 887/1131 (78%), Gaps = 55/1131 (4%)
Query: 20 SSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV---RTMSH 76
SSG+S H S +AQ T DA+LHAV+E+SGESG SFDY++SV ++
Sbjct: 9 SSGSSAKSKH---------SVRVAQTTADAKLHAVYEESGESGDSFDYTKSVNATKSTGE 59
Query: 77 SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-- 134
S+P Q ++AYL ++QRGG +QPFGC +AV+E +FRVIA+S+NAGEML L PQSVP+L
Sbjct: 60 SIPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGAG 119
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+Q++L IG+D R+LFT +S+ LEKA GA ++++LNPI +H K + KPFYAI+HR+DVG+
Sbjct: 120 QQDLLGIGSDARSLFTPASASALEKAAGAIDVSMLNPISVHCKTSAKPFYAIVHRIDVGL 179
Query: 195 VIDLEPARTEDPAL-SIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
V+DLEP + D ++ S AGA+QS KLA +AIS+LQSLPGGDI LLCDTVVE VR+LTGYD
Sbjct: 180 VLDLEPVKASDTSVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYD 239
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVM Y+FH+DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC A P
Sbjct: 240 RVMAYKFHDDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAAP 299
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-------- 365
+ + QD+ L QP+ L GSTLRAPHGCHAQYM NMGS+ASL +AVIIN ND+E
Sbjct: 300 VKISQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSSGGG 359
Query: 366 ---AVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKH 396
+ +LW FGLQLNME++LA+QL EKH
Sbjct: 360 GGGGAYQQKGRKLWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKH 419
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GIV+QSP+IMDLVKC+GAALYY +++ LGVTP+E QIKDI
Sbjct: 420 ILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCNGAALYYGKRFWLLGVTPSEAQIKDIA 479
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
+WLL +H DSTGLSTDSLADAGYP AA+LGD VCGMA A IT +DFLFWFRSHTAKEIKW
Sbjct: 480 DWLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEIKW 539
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKH P+DKDDG++MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR SF D +
Sbjct: 540 GGAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHDIDD 599
Query: 577 SNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELT 636
S++K +++A+L DL+LQG+DELS+VA EMVRLIETATAPI AVD G +NGWNAKVAELT
Sbjct: 600 SDTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELT 659
Query: 637 GLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
GL V EAMG+SL DLV +E ++V+ LL+ AL+G+E++NVE+KL+TFG + K+AV +V
Sbjct: 660 GLPVTEAMGRSLAKDLVLQESADMVERLLYLALQGDEEQNVELKLKTFGVQKDKEAVILV 719
Query: 697 VNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDEN 756
VNAC+S+D ++N+VGVCFVGQDVT QK+VMDKF IQGDYKAIV +PNPLIPPIF +DE
Sbjct: 720 VNACASRDVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEF 779
Query: 757 TCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQ 813
CSEWN AMEKL+GW R +++GKMLVGE+FG CRLKG DA+TKFMI L++A GQ
Sbjct: 780 GYCSEWNPAMEKLSGWKREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQ 839
Query: 814 DTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKK 873
DTEKFPF FDR GKYV+ALLTA KR + EG I G FCFL IAS ELQQALTVQR EK
Sbjct: 840 DTEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKV 899
Query: 874 CFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVD 933
++LKELAYI QEIKNPL G+ FT +L+E TDL+EDQKQ +ET A CEKQ+ KI+ D+D
Sbjct: 900 ALSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMD 959
Query: 934 LESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARI 993
LESIEDG LE + EF++G+V++AV+SQ M+ +E+NLQLIR+ P+EIK + +YGDQ R+
Sbjct: 960 LESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRL 1019
Query: 994 QQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQD 1053
QQVLADFLLN +R++PS+E WV I V + K+ G ++H EFR+ PG GLP ELVQ+
Sbjct: 1020 QQVLADFLLNAIRFTPSSENWVGIKVATSRKRLGGGVHVMHLEFRITHPGVGLPEELVQE 1079
Query: 1054 MFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
MF R MTQEGLGLSMCRK++KLMNGEV+Y+RE + +FL+ ELP+ +R
Sbjct: 1080 MFDRGRGMTQEGLGLSMCRKLVKLMNGEVEYLREPGKNFFLVSLELPLAQR 1130
>gi|25986843|gb|AAM94952.1| phytochrome [Physcomitrella patens]
Length = 1126
Score = 1493 bits (3865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/1122 (64%), Positives = 881/1122 (78%), Gaps = 44/1122 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV---RTM 74
A SSG+S +++ H S +AQ T DA+L AV+E+SG+SG SFDYS+SV ++
Sbjct: 7 AYSSGSS-VKSKH--------SVRVAQTTADAKLQAVYEESGDSGDSFDYSKSVHASKST 57
Query: 75 SHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
+VP ++AYL ++QRGG +Q FGC + VDE++FRVIAYSENA EML L PQ+VP++
Sbjct: 58 GENVPALAVTAYLQRMQRGGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSVG 117
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+QE+L IGTD RTLFT SS+ LEK GA ++T+LNPI +H +++GKPFYAILHR+DVG+
Sbjct: 118 QQEVLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGL 177
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
VID EP R D +S AGA+QS KLA +AIS+LQ+LPGGDI LLCDTVVE VRQL+GYDR
Sbjct: 178 VIDFEPVRPNDAVVSSAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYDR 237
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC+A P+
Sbjct: 238 VMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPPV 297
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE--AVGGRST 372
V+QD+ L QP+ L GSTLRAPHGCHAQYM NM SIASL +AVI+N DE+ + GG+
Sbjct: 298 KVVQDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQR 357
Query: 373 TR-LWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
R LW FGLQLNME++LA+QL EKH+LRTQTLLC
Sbjct: 358 GRKLWGLVVCHHTSPRTVSFPLRSACEFLMLVFGLQLNMEVELAAQLREKHILRTQTLLC 417
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DMLLRD+P GIV+QSP+IMDLVKCDGAALYY +++ LG+TP E QIK+I +W L +H D
Sbjct: 418 DMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWFLEHHQD 477
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSLADAGYP AA LGDAVCGMA A IT RDFLFWFRSHTAKEIKWGGAKH P++
Sbjct: 478 STGLSTDSLADAGYPGAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPDE 537
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNA 585
KDDG++MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLI R SF+D + S++K +++A
Sbjct: 538 KDDGRKMHPRSSFKAFLEVVKRRSLPWEDIEMDAIHSLQLISRGSFQDIDDSDTKTMIHA 597
Query: 586 QLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMG 645
+L DL+LQG+DELS+VA EMVRLIETATAPI AVD G +NGWNAKVAELTGL V EAMG
Sbjct: 598 RLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGEAMG 657
Query: 646 KSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDY 705
+SLV DL+ +E ++V LL+ AL+GEE++N+EI+L+TFG + K AV ++VNACSS+D
Sbjct: 658 RSLVKDLILEESIDVVQRLLYLALQGEEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDV 717
Query: 706 TNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTA 765
+N+VGVCFVGQDVT QK V+DKF IQGDYKAIV +PNPLIPPIF +DE CSEWN +
Sbjct: 718 QDNVVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPS 777
Query: 766 MEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPL 822
MEKLTGW R +++GK+LVGE+FG CCRLKG DA+TKFMIAL++A GQDT++FPF
Sbjct: 778 MEKLTGWKREEVLGKLLVGEIFGMQLMCCRLKGQDAMTKFMIALNSAMDGQDTDRFPFSF 837
Query: 823 FDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELA 882
FDR GKYV ALLT NKR + EG I G FCFL S EL QALTVQR EK FA+LKELA
Sbjct: 838 FDRQGKYVDALLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVAFAKLKELA 897
Query: 883 YICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSL 942
YI QEIKNPL G+ FT +L+E TDL+EDQ+Q +ETSA CE+Q+ K++ D+DLESIEDG L
Sbjct: 898 YIRQEIKNPLYGIMFTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIEDGYL 957
Query: 943 EFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLL 1002
E + EF++G+V++AVVSQ M+ RE+ LQLIR+ P EIK + ++GDQ R+QQVLADFLL
Sbjct: 958 ELDTNEFVMGTVMDAVVSQGMITSREKGLQLIRETPREIKNMCLFGDQVRLQQVLADFLL 1017
Query: 1003 NMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT 1062
N V+++PS+ GWV I V PT K+ G ++H EFR+ G GLP ELV +MF R MT
Sbjct: 1018 NAVKFTPSSGGWVGIKVVPTKKRLGGGIHVMHLEFRVTHSGMGLPEELVHEMFDRGRGMT 1077
Query: 1063 QEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
QEGLGLSMCRK++KLMNG VQYIRE+ + YFL+ ELP+ +R
Sbjct: 1078 QEGLGLSMCRKLVKLMNGNVQYIRETGKSYFLVEVELPLAQR 1119
>gi|356555999|ref|XP_003546315.1| PREDICTED: phytochrome B-like isoform 2 [Glycine max]
Length = 867
Score = 1485 bits (3844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/866 (81%), Positives = 772/866 (89%), Gaps = 28/866 (3%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE--ILTIGTDVRTLFTSSSSVLLEKA 160
IAVDE +FR++AYS+NA +MLG+ PQSVP+L+ + +GTD+RTLFT SS+VLLEKA
Sbjct: 2 IAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEKA 61
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
F AREI+L+NPIWIHS+ +GKPFY ILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLA
Sbjct: 62 FSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLA 121
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
VRAISQLQSLPGGD+KLLCDTVVESVR+LTGYDRVMVYRFHEDEHGEVVAE+KRPDLEPY
Sbjct: 122 VRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDLEPY 181
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLFKQNRVRMIVDCHA+ + V+QDE L+QPLCLVGSTLRAPHGCH
Sbjct: 182 IGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGCH 241
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------------ 376
AQYMANMGS ASL +AVIINGNDEE VGGR++ RLW
Sbjct: 242 AQYMANMGSTASLVMAVIINGNDEEGVGGRTSMRLWGLVVCHHTSARCIPFPLRYACEFL 301
Query: 377 --AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAL 434
AFGLQLNMELQLA+Q EK VLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAAL
Sbjct: 302 MQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAAL 361
Query: 435 YYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAV 494
YYQG YYPLGVTPTE QI+DI+EWLL +H DSTGLSTDSLADAGYP AA+LGDAVCGMAV
Sbjct: 362 YYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCGMAV 421
Query: 495 AYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDN 554
AYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+N
Sbjct: 422 AYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWEN 481
Query: 555 AEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATA 614
AEMDAIHSLQLILRDSF+DAE SNSKAV++ ++ +LELQGVDELSSVAREMVRLIETATA
Sbjct: 482 AEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMVRLIETATA 541
Query: 615 PIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEED 674
PIFAVDV G +NGWNAKV+ELTGL VEEAMGKSLV DLV+KE EE VD LL ALKGEED
Sbjct: 542 PIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRALKGEED 601
Query: 675 KNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQG 734
KNVEIK+RTFG E++ KAVFVVVNACSSKDYTNN+VGVCFVGQDVT QK+VMDKFI+IQG
Sbjct: 602 KNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDKFINIQG 661
Query: 735 DYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLK 794
DYKAIVH+PNPLIPPIFASD+NTCC EWNTAMEKLTGWSR D+IGKMLVGEVFGSCC+LK
Sbjct: 662 DYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVFGSCCQLK 721
Query: 795 GPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQ 854
G D++TKFMI LHNA GG DT++FPF DR GK+VQA LTANKRVNM+GQI+GAFCFLQ
Sbjct: 722 GSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQIIGAFCFLQ 781
Query: 855 IASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQL 914
I SPELQQAL QRQQEK FAR+KELAYICQ +KNPLSG+ FTNSLLEAT L+ +QKQ
Sbjct: 782 IVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCLSNEQKQF 841
Query: 915 LETSAACEKQMLKIIKDVDLESIEDG 940
LETSAACEKQMLKII DVD+ESIEDG
Sbjct: 842 LETSAACEKQMLKIIHDVDIESIEDG 867
>gi|190586169|gb|ACE79201.1| phytochrome B-4 [Glycine max]
Length = 867
Score = 1483 bits (3839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/866 (81%), Positives = 772/866 (89%), Gaps = 28/866 (3%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE--ILTIGTDVRTLFTSSSSVLLEKA 160
IAVDE +FR++AYS+NA +MLG+ PQSVP+L+ + +GTD+RTLFT SS+VLLEKA
Sbjct: 2 IAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEKA 61
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
F AREI+L+NPIWIHS+ +GKPFY ILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLA
Sbjct: 62 FSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLA 121
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
VRAISQLQSLPGGD+KLLCDTVVESVR+LTGYDRVMVYRFHEDEHGEVVAE+KRPDLEPY
Sbjct: 122 VRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDLEPY 181
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLFKQNRVRMIVDCHA+ + V+QDE L+QPLCLVGSTLRAPHGCH
Sbjct: 182 IGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGCH 241
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------------ 376
AQYMANMGS ASL +AVIINGNDEE VGGR++ RLW
Sbjct: 242 AQYMANMGSTASLVMAVIINGNDEEGVGGRTSMRLWGLVICHHTSARCIPFPLRYACEFL 301
Query: 377 --AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAL 434
AFGLQLNMELQLA+Q EK VLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAAL
Sbjct: 302 MQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAAL 361
Query: 435 YYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAV 494
YYQG YYPLGVTPTE QI+DI+EWLL +H DSTGLSTDSLADAGYP AA+LGDAVCGMAV
Sbjct: 362 YYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCGMAV 421
Query: 495 AYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDN 554
AYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW++
Sbjct: 422 AYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWES 481
Query: 555 AEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATA 614
AEMDAIHSLQLILRDSF+DAE SNSKAV++ ++ +LELQGVDELSSVAREMVRLIETATA
Sbjct: 482 AEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMVRLIETATA 541
Query: 615 PIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEED 674
PIFAVDV G +NGWNAKV+ELTGL VEEAMGKSLV DLV+KE EE VD LL ALKGEED
Sbjct: 542 PIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRALKGEED 601
Query: 675 KNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQG 734
KNVEIK+RTFG E++ KAVFVVVNACSSKDYTNN+VGVCFVGQDVT QK+VMDKFI+IQG
Sbjct: 602 KNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDKFINIQG 661
Query: 735 DYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLK 794
DYKAIVH+PNPLIPPIFASD+NTCC EWNTAMEKLTGWSR D+IGKMLVGEVFGSCC+LK
Sbjct: 662 DYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVFGSCCQLK 721
Query: 795 GPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQ 854
G D++TKFMI LHNA GG DT++FPF DR GK+VQA LTANKRVNM+GQI+GAFCFLQ
Sbjct: 722 GSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQIIGAFCFLQ 781
Query: 855 IASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQL 914
I SPELQQAL QRQQEK FAR+KELAYICQ +KNPLSG+ FTNSLLEAT L+ +QKQ
Sbjct: 782 IVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCLSNEQKQF 841
Query: 915 LETSAACEKQMLKIIKDVDLESIEDG 940
LETSAACEKQMLKII DVD+ESIEDG
Sbjct: 842 LETSAACEKQMLKIIHDVDIESIEDG 867
>gi|400792|sp|Q01549.1|PHY1_SELMA RecName: Full=Phytochrome 1
gi|22603|emb|CAA43698.1| phytochrome [Selaginella martensii]
Length = 1134
Score = 1483 bits (3839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/1124 (63%), Positives = 884/1124 (78%), Gaps = 49/1124 (4%)
Query: 20 SSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV---RTMSH 76
SSG+S H S +AQ T DA+LHAV+E+SGESG SFDYS+S+ ++
Sbjct: 9 SSGSSAKSKH---------SVRVAQTTADAKLHAVYEESGESGDSFDYSKSINATKSTGE 59
Query: 77 SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-- 134
++P Q ++AYL ++QRGG +QPFGC +AV+E +FRVIA+S+NAGEML L PQSVP+L
Sbjct: 60 TIPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGSG 119
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+Q++LTIGTD RTLFT+++S L + A GA ++++LNPIW+ SK + KPFYAI+HR+DVG+
Sbjct: 120 QQDVLTIGTDARTLFTAAASALEKAA-GAVDLSMLNPIWVQSKTSAKPFYAIVHRIDVGL 178
Query: 195 VIDLEPARTEDPAL-SIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
V+DLEP + D + S AGA+QS KLA +AIS+LQSLPGGDI LLCDTVVE VR +TGYD
Sbjct: 179 VMDLEPVKASDTRVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRDVTGYD 238
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
VM Y+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC A P
Sbjct: 239 LVMAYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAPP 298
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT 373
+ + QD+ L QP+ L GSTLRAPHGCHAQYM NMGS+ASL +A+IIN NDE + GG
Sbjct: 299 VKITQDKELRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAMIINDNDEPSGGGGGGG 358
Query: 374 -----RLWA-------------------------FGLQLNMELQLASQLSEKHVLRTQTL 403
RLW FGLQLNME +A+ + EKH+LRTQTL
Sbjct: 359 QHKGRRLWGLVVCHHTSPRSVPFLRSACEFLMQVFGLQLNMEAAVAAHVREKHILRTQTL 418
Query: 404 LCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYH 463
LCDMLLRD+P GIV+QSP+IMDLVKCDGAALYY +++ LG+TP+E QIKDI EWLL +H
Sbjct: 419 LCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPSEAQIKDIAEWLLEHH 478
Query: 464 GDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHP 523
DSTGLSTDSLADAGYP AA+LGD VCGMA A IT +DFLFWFRSHTAKE+KWGGAKH P
Sbjct: 479 KDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDP 538
Query: 524 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVV 583
+DKDDG++MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR SF+D + S++K ++
Sbjct: 539 DDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMI 598
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+A+L DL+LQG+DELS+VA EMVRLIETATAPI AVD G +NGWNAKVA++TGL V EA
Sbjct: 599 HARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVADVTGLPVTEA 658
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
MG+SL +LV E ++V+ LL+ AL+G+E++NVE+KL+TFG + K+AV +VVNAC+S+
Sbjct: 659 MGRSLAKELVLHESADMVERLLYLALQGDEEQNVELKLKTFGGQKDKEAVILVVNACASR 718
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D ++N+VGVCFVGQDVT QK+VMDKF IQGDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 719 DVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFGYCSEWN 778
Query: 764 TAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPF 820
AMEKL+GW R +++GKMLVGE+FG CRLKG DA+TKFMI L++A GQDTEKFPF
Sbjct: 779 PAMEKLSGWRREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQDTEKFPF 838
Query: 821 PLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKE 880
FDR GKYV+ALLTA KR + EG I G FCFL IAS ELQQALTVQR EK ++LKE
Sbjct: 839 AFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKLKE 898
Query: 881 LAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDG 940
LAYI QEIKNPL G+ FT +L+E TDL+EDQKQ +ET A CEKQ+ KI+ D+DLESIEDG
Sbjct: 899 LAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDG 958
Query: 941 SLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADF 1000
LE + EF++G+V++AV+SQ M+ +E+NLQLIR+ P+EIK + +YGDQ R+QQVLADF
Sbjct: 959 YLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQVLADF 1018
Query: 1001 LLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRW 1060
LLN +R++PS+E WV I V + K+ ++H EFR+ PG GLP ELVQ+MF R
Sbjct: 1019 LLNAIRFTPSSENWVGIKVATSRKRLGGVVHVMHLEFRITHPGVGLPEELVQEMFDRGRG 1078
Query: 1061 MTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
MTQEGLGLSMCRK++KLMNGEV+YIRE+ + YFL+ ELP+ +R
Sbjct: 1079 MTQEGLGLSMCRKLVKLMNGEVEYIREAGKNYFLVSLELPLAQR 1122
>gi|255557437|ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
gi|223541166|gb|EEF42722.1| phytochrome B, putative [Ricinus communis]
Length = 1131
Score = 1481 bits (3835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/1086 (64%), Positives = 858/1086 (79%), Gaps = 22/1086 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
+ IAQY DA L A FEQSG SGKSF+YS+SV + H+VPE+QI+AYLS+IQRGG IQP
Sbjct: 32 TATIAQYNADAGLLAEFEQSGVSGKSFNYSRSVLSAPHNVPEEQITAYLSRIQRGGLIQP 91
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEIL-TIGTDVRTLFTSSSSVLL 157
FGC +A++E TFR+I+YSEN +LGL+ SV LE ++ IG DVR LFT S L
Sbjct: 92 FGCMVAIEEPTFRIISYSENCFHLLGLSASSV--LESNQVKGLIGIDVRALFTPQSGASL 149
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
KA +REI++LNPIW++S+ + KPFYAILHR+DVGIVIDLEPAR+ DP LS+AGAVQSQ
Sbjct: 150 SKAAASREISMLNPIWVYSRTSQKPFYAILHRIDVGIVIDLEPARSGDPVLSLAGAVQSQ 209
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLAVRAIS+LQSLPGGDI +LCDTVVE V++LTGYDRVMVY+FH+D+HGEV++E +R DL
Sbjct: 210 KLAVRAISRLQSLPGGDIGMLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVLSEIRRSDL 269
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQA+RFLFKQNRVRMI DCHA P+ VIQ E L PLCLV STLR+PH
Sbjct: 270 EPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVRVIQSEELKHPLCLVNSTLRSPH 329
Query: 338 GCHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFG 379
GCH QYMANMGSIASL +AV+INGND + G ++ R + AFG
Sbjct: 330 GCHTQYMANMGSIASLVMAVVINGNDSTKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFG 389
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQL MELQLA++L EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY+GK
Sbjct: 390 LQLYMELQLAAKLVEKKILQTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYRGK 449
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LG+TPTE+Q+KDI +WLL HGDSTGL+TDSLADAGYP A LGDAVCGMA A IT
Sbjct: 450 CWLLGITPTESQVKDIADWLLNNHGDSTGLTTDSLADAGYPGALLLGDAVCGMATARITS 509
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF AFLEVVKSRS+PW+ +E++A
Sbjct: 510 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKSRSMPWEVSEINA 569
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLI+RDSF+D E S SKA+VNAQ D ++QG+DELSSVA EMVRLIETATAPIF V
Sbjct: 570 IHSLQLIMRDSFQDMEDSASKAMVNAQQTDTDVQGIDELSSVACEMVRLIETATAPIFGV 629
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEI 679
D G VNGWNAK+AELTGL EAMGKSLV ++V+K+ E V++LL AL+GEEDKNVE+
Sbjct: 630 DSAGSVNGWNAKIAELTGLQASEAMGKSLVREVVHKDSYEFVESLLCRALQGEEDKNVEL 689
Query: 680 KLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAI 739
KLR FG + AVFVV NAC+S+DY NN++GVCFVGQDVT +K+VMDKF+ +QGDYK I
Sbjct: 690 KLRKFGLHQQNSAVFVVANACTSRDYANNVIGVCFVGQDVTSEKIVMDKFLRLQGDYKVI 749
Query: 740 VHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDAL 799
+ S NPLIPPIFASDEN CC EWN AME+LTG +R ++IGKML GE+FG CRLK D L
Sbjct: 750 IESLNPLIPPIFASDENACCCEWNAAMERLTGRTRQEVIGKMLPGEIFGGLCRLKDQDTL 809
Query: 800 TKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPE 859
TKFMI L+ QDT+KFPF F+R GK+V+ LTANKR + +G+ +G FCFLQ+ P+
Sbjct: 810 TKFMILLYRGLSDQDTDKFPFGFFNRQGKFVEVFLTANKRTDADGKTIGCFCFLQVIGPD 869
Query: 860 LQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSA 919
LQQ L +Q++++ +LK+LAYI +E+K+PLSG+ FT+ LLE T +E QKQ LETS
Sbjct: 870 LQQTLDEHKQEDQESLLKLKQLAYIREEMKSPLSGIRFTHKLLEDTATSEHQKQFLETSD 929
Query: 920 ACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPE 979
ACEKQ++ II+D+DL +E+G +E + EF L +V++A+VSQ+M+LLRER++QL +IPE
Sbjct: 930 ACEKQIMTIIEDIDLAKLEEGKIELKVEEFFLVNVLDAIVSQIMLLLRERSIQLFHEIPE 989
Query: 980 EIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRM 1039
EIKT++VYGDQ R+Q VL+DFLL++VR++PS +GWVEI V LK + + + RM
Sbjct: 990 EIKTVSVYGDQIRLQLVLSDFLLSVVRHAPSPDGWVEIKVSSGLKLMQDSHEFLRVQIRM 1049
Query: 1040 VCPGEGLPPELVQDMFHSSR-WMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFE 1098
PG+GLP L +DMF W TQEGL L + RK+L MNG V Y RE +C+FLI E
Sbjct: 1050 THPGQGLPSALTEDMFEEGNCWTTQEGLALKLSRKLLHQMNGHVHYTREHNKCFFLIDLE 1109
Query: 1099 LPMPRR 1104
L + R
Sbjct: 1110 LKLKNR 1115
>gi|168060714|ref|XP_001782339.1| phytochrome 2 [Physcomitrella patens subsp. patens]
gi|139001623|dbj|BAF51708.1| phytochrome2 [Physcomitrella patens]
gi|162666198|gb|EDQ52859.1| phytochrome 2 [Physcomitrella patens subsp. patens]
Length = 1130
Score = 1480 bits (3832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/1122 (63%), Positives = 875/1122 (77%), Gaps = 44/1122 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV---RTM 74
A SSG+S +++ H S +AQ T DA+L AV+E+SG+SG SFDYS+SV ++
Sbjct: 7 AYSSGSS-VKSKH--------SVRVAQTTADAKLQAVYEESGDSGDSFDYSKSVHASKST 57
Query: 75 SHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
+V Q ++AYL ++QRGG +Q FGC + V+E+ FRVIA+SENA EML L PQ+VP++
Sbjct: 58 GENVSAQAVTAYLQRMQRGGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSVG 117
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+QE+L IGTD RTLFT SS+ LEK GA ++T+LNPI +H +++GKPFYAILHR+DVG+
Sbjct: 118 QQEVLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGL 177
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
VID EP R+ D +S AG +QS KLA +AIS+LQ+LPGGDI LLCD VV+ VR+L+GYDR
Sbjct: 178 VIDFEPVRSNDAIVSSAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYDR 237
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC A+P+
Sbjct: 238 VMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASPV 297
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE--AVGGRST 372
VIQD+ L QP+ L GSTLRAPHGCHAQYM NM SIASL +AVI+N DE+ A GG+
Sbjct: 298 KVIQDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQR 357
Query: 373 TR-LWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
R LW FGLQLNME++LA+QL EKH+LRTQTLLC
Sbjct: 358 GRKLWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLC 417
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DMLLRD+P GIV+QSP+IMDLVKCDGAALYY +++ LG+TP + QIK+I +WLL +H D
Sbjct: 418 DMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNDAQIKEIADWLLEHHQD 477
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSLADAGYP AA LGDAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKH P++
Sbjct: 478 STGLSTDSLADAGYPGAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPDE 537
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNA 585
KDDG++MHPRSSFKAFL VVK RSLPW++ EMDAIHSLQLILR SF+D + S++K +++A
Sbjct: 538 KDDGRKMHPRSSFKAFLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHA 597
Query: 586 QLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMG 645
+L DL+LQG+DELS+VA EMVRLIETATAPI AVD G +NGWNAKVAELTGL VEEAMG
Sbjct: 598 RLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEEAMG 657
Query: 646 KSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDY 705
+SLV DL+ E ++V LLH AL+G+E++N+EI+L+TFG + K AV ++VNACSS+D
Sbjct: 658 RSLVKDLILNESIDVVQRLLHLALQGDEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDV 717
Query: 706 TNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTA 765
+N+VGVCFVGQDVT QK V+DKF IQGDYKAIV +PNPLIPPIF +DE CSEWN +
Sbjct: 718 QDNVVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPS 777
Query: 766 MEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPL 822
MEKLTGW R ++IGK+LVGE+FG CCRLK DA+TKFMI L+ A GQDT++FPF
Sbjct: 778 MEKLTGWKREEVIGKLLVGEIFGIQLMCCRLKSQDAMTKFMIVLNGAMDGQDTDRFPFSF 837
Query: 823 FDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELA 882
FDR GKYV LLT NKR + EG I G FCFL S EL QALTVQR EK FA+LKELA
Sbjct: 838 FDRQGKYVDPLLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVAFAKLKELA 897
Query: 883 YICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSL 942
YI QEIKNPL G+ FT +L+E TDL+ DQ+Q +ETSA CE+Q+ KI+ D+DLESIEDG L
Sbjct: 898 YIRQEIKNPLYGIVFTRNLMEDTDLSVDQRQFVETSAVCERQLRKILDDLDLESIEDGYL 957
Query: 943 EFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLL 1002
E + EF +G+V++AVVSQ M+ RE+ LQLIR+ P EIK + +YGDQ R+QQVLADFLL
Sbjct: 958 ELDTTEFEMGTVMDAVVSQGMITSREKGLQLIRETPSEIKNMCLYGDQVRLQQVLADFLL 1017
Query: 1003 NMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT 1062
N VR++PS+EGWV I V PT K+ G ++H EFR+ PG GLP ELV +MF R MT
Sbjct: 1018 NAVRFTPSSEGWVGIKVVPTKKRLGRGVHVMHLEFRVTHPGLGLPEELVHEMFGRGRGMT 1077
Query: 1063 QEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
QEGLGLSMCRK++KLMNG VQYIRE+ + FL+ ELP+ +R
Sbjct: 1078 QEGLGLSMCRKLVKLMNGTVQYIRETGKSCFLVEVELPLAQR 1119
>gi|25986847|gb|AAM94954.1| phytochrome [Physcomitrella patens]
Length = 1130
Score = 1476 bits (3821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/1122 (63%), Positives = 874/1122 (77%), Gaps = 44/1122 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV---RTM 74
A SSG+S +++ H S +AQ T DA+L AV+E+SG+SG SFDYS+SV ++
Sbjct: 7 AYSSGSS-VKSKH--------SVRVAQTTADAKLQAVYEESGDSGDSFDYSKSVHASKST 57
Query: 75 SHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
+V Q ++AYL ++QRGG +Q FGC + V+E+ FRVIA+SENA EML L PQ+VP++
Sbjct: 58 GENVSAQAVTAYLQRMQRGGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSVG 117
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+QE+L IGTD RTLFT SS+ LEK G ++T+LNPI +H +++GKPFYAILHR+DVG+
Sbjct: 118 QQEVLGIGTDARTLFTPSSAAALEKCAGTVDVTMLNPISVHCRSSGKPFYAILHRIDVGL 177
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
VID EP R+ D +S AG +QS KLA +AIS+LQ+LPGGDI LLCD VV+ VR+L+GYDR
Sbjct: 178 VIDFEPVRSNDAIVSSAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYDR 237
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC A+P+
Sbjct: 238 VMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASPV 297
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE--AVGGRST 372
VIQD+ L QP+ L GSTLRAPHGCHAQYM NM SIASL +AVI+N DE+ A GG+
Sbjct: 298 KVIQDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQR 357
Query: 373 TR-LWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
R LW FGLQLNME++LA+QL EKH+LRTQTLLC
Sbjct: 358 GRKLWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLC 417
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DMLLRD+P GIV+QSP+IMDLVKCDGAAL+Y +++ LG+TP + QIK+I +WLL +H D
Sbjct: 418 DMLLRDAPIGIVSQSPNIMDLVKCDGAALHYGKRFWLLGITPNDAQIKEIADWLLEHHQD 477
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSLADAGYP AA LGDAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKH P++
Sbjct: 478 STGLSTDSLADAGYPGAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPDE 537
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNA 585
KDDG++MHPRSSFKAFL VVK RSLPW++ EMDAIHSLQLILR SF+D + S++K +++A
Sbjct: 538 KDDGRKMHPRSSFKAFLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHA 597
Query: 586 QLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMG 645
+L DL+LQ +DELS+VA EMVRLIETATAPI AVD G +NGWNAKVAELTGL VEEAMG
Sbjct: 598 RLNDLKLQDMDELSTVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEEAMG 657
Query: 646 KSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDY 705
+SLV DL+ E ++V LLH AL+G+E++N+EI+L+TFG + K AV ++VNACSS+D
Sbjct: 658 RSLVKDLILNESIDVVQRLLHLALQGDEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDV 717
Query: 706 TNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTA 765
+N+VGVCFVGQDVT QK V+DKF IQGDYKAIV +PNPLIPPIF +DE CSEWN +
Sbjct: 718 QDNVVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPS 777
Query: 766 MEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPL 822
MEKLTGW R ++IGK+LVGE+FG CCRLK DA+TKFMI L+ A GQDT++FPF
Sbjct: 778 MEKLTGWKREEVIGKLLVGEIFGIQLMCCRLKSQDAMTKFMIVLNGAMDGQDTDRFPFSF 837
Query: 823 FDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELA 882
FDR GKYV LLT NKR + EG I G FCFL S EL QALTVQR EK FA+LKELA
Sbjct: 838 FDRQGKYVDPLLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVAFAKLKELA 897
Query: 883 YICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSL 942
YI QEIKNPL G+ FT +L+E TDL+ DQ+QL+ETSA CE+Q+ KI+ D+DLESIEDG L
Sbjct: 898 YIRQEIKNPLYGIVFTRNLMEDTDLSVDQRQLVETSAVCERQLRKILDDLDLESIEDGYL 957
Query: 943 EFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLL 1002
E + EF +G+V++AVVSQ M+ RE+ LQLIR+ P EIK + +YGDQ R+QQVLADFLL
Sbjct: 958 ELDTTEFEMGTVMDAVVSQGMITSREKGLQLIRETPSEIKNMCLYGDQVRLQQVLADFLL 1017
Query: 1003 NMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT 1062
N VR++PS+EGWV I V PT K+ G ++H EFR+ PG GLP ELV +MF R MT
Sbjct: 1018 NAVRFTPSSEGWVGIKVVPTKKRLGRGVHVMHVEFRVTHPGLGLPEELVHEMFGRGRGMT 1077
Query: 1063 QEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
QEGLGLSMCRK++KLMNG VQYIRE+ + FL+ ELP+ +R
Sbjct: 1078 QEGLGLSMCRKLVKLMNGTVQYIRETGKSCFLVEVELPLAQR 1119
>gi|168017219|ref|XP_001761145.1| phytochrome 5a [Physcomitrella patens subsp. patens]
gi|162687485|gb|EDQ73867.1| phytochrome 5a [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1471 bits (3808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 707/1124 (62%), Positives = 872/1124 (77%), Gaps = 43/1124 (3%)
Query: 14 SQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV-- 71
S A S+G S I++ H S + Q T DA+L A +E+S +SG SFDYS+SV
Sbjct: 3 SAKLAYSTG-SGIKSKH--------SVRVQQTTADAKLQAAYEESNDSGDSFDYSKSVGQ 53
Query: 72 --RTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS 129
++ VP Q ++AYL ++QRGG Q FGC +AV+E TFRVIAYSENA +ML L PQ+
Sbjct: 54 AAKSTVQQVPAQAVTAYLQRMQRGGLTQTFGCMLAVEENTFRVIAYSENALDMLDLMPQA 113
Query: 130 VPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHR 189
VP++ +Q++L IGTD R+LFT SS+ LE+A +++++NP+ +HS+++GKPFYAILHR
Sbjct: 114 VPSVGQQDVLGIGTDSRSLFTPSSAAALERATQQSDLSMVNPVSVHSRSSGKPFYAILHR 173
Query: 190 VDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQL 249
+DVGIV+D EP R D +S AG + S KLA +AIS+LQSLPGGDI LLCDTVVE VR+L
Sbjct: 174 IDVGIVMDFEPVRPNDVVVSSAGTIHSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVREL 233
Query: 250 TGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDC 309
TGYDRVM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +NR RMIVDC
Sbjct: 234 TGYDRVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRFRMIVDC 293
Query: 310 HATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG 369
+A P+ VIQD+ L QPL L GSTLRAPHGCHAQYM NMGSIAS+ +AV++N +++ G
Sbjct: 294 YAPPVKVIQDKDLRQPLTLAGSTLRAPHGCHAQYMGNMGSIASVTMAVVVNDQEDDG-GS 352
Query: 370 RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTL 403
+ RLW FGLQLNME++LA+QL EKH+LRTQTL
Sbjct: 353 QKARRLWGLVVCHHTSARMISFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTL 412
Query: 404 LCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYH 463
LCDMLLRD+P GIV+QSP+IMDLVKCDGAALYY +++ LG+TP+E QIK+I +WLL H
Sbjct: 413 LCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGNRFWLLGITPSEQQIKEIADWLLECH 472
Query: 464 GDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHP 523
DSTGLSTDSLADAGYP A LGDAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 473 KDSTGLSTDSLADAGYPGANLLGDAVCGMAAARITPKDFLFWFRSHTAKEIKWGGAKHDA 532
Query: 524 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVV 583
+D+DDG++M PRSSF AFLEVVK RS+PW++ EMDAIHSLQLILR SF+D + S++K ++
Sbjct: 533 DDRDDGRKMTPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMI 592
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+A+L DL+LQG+DELS+VA EMVRLIETAT PI AVD G +NGWNAKVAELTGLSV +A
Sbjct: 593 HARLNDLKLQGMDELSTVANEMVRLIETATTPILAVDSSGFINGWNAKVAELTGLSVGDA 652
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
MG+SLV DL+ +E E V LL+ AL+GEE++NVEI+LRTFG + K AV ++VNACSS+
Sbjct: 653 MGRSLVKDLILEESVEDVQRLLYLALQGEEEQNVEIRLRTFGPQKAKGAVILIVNACSSR 712
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D N+VGVCFVGQDVT QK++ DKF I GDYK+IV +PNPLIPPIF SD+ C+EW+
Sbjct: 713 DVQENVVGVCFVGQDVTGQKMLHDKFTRIHGDYKSIVQNPNPLIPPIFGSDDLGYCTEWS 772
Query: 764 TAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPF 820
+MEKLTGW R +++GKMLVGEVFG CCRLKG DA+TKFMI L+NA GQDT+K+PF
Sbjct: 773 PSMEKLTGWKRDEVLGKMLVGEVFGMHLMCCRLKGQDAVTKFMIVLNNAMDGQDTDKYPF 832
Query: 821 PLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKE 880
FDR GK+V+ALLTANKR + +G I G FCFL IASPEL QALTVQR EK FA+LKE
Sbjct: 833 SFFDRQGKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKE 892
Query: 881 LAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDG 940
LAYI QEIKNPL G+ FT +L+E TDL++DQKQ ++TSA CE+Q+ KI+ D+DLESIEDG
Sbjct: 893 LAYIRQEIKNPLYGIMFTRNLMEDTDLSDDQKQFMDTSAVCERQLRKILDDMDLESIEDG 952
Query: 941 SLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADF 1000
LE E AEF +GS+++AVVSQ M+ RE+ LQLIR+ P EIK + ++GDQ R+QQVLADF
Sbjct: 953 YLELETAEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIKDMCLFGDQVRLQQVLADF 1012
Query: 1001 LLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRW 1060
LLN VR++PS+EGWV I V T ++ G +VH EFR+ PG GLP EL+ +MF R
Sbjct: 1013 LLNAVRFTPSSEGWVGIKVVATKRRLGGGFHVVHLEFRVTHPGSGLPEELIHEMFDRGRG 1072
Query: 1061 MTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
MTQEGLGL+MCRK++KLMNG VQY RE+ + YFL+ ELP+ R
Sbjct: 1073 MTQEGLGLNMCRKLVKLMNGNVQYKRETGKSYFLVTLELPLAVR 1116
>gi|183239028|gb|ACC60972.1| phytochrome E [Vitis riparia]
Length = 1124
Score = 1467 bits (3799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/1085 (65%), Positives = 858/1085 (79%), Gaps = 23/1085 (2%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGC 101
IAQY DARL A FEQSGESGKSF+YS+SV SVPE QI AYLS+IQRGG +QPFGC
Sbjct: 37 IAQYNADARLLAEFEQSGESGKSFNYSRSVMNAPESVPEDQIIAYLSRIQRGGLVQPFGC 96
Query: 102 TIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAF 161
+A++E TFR+I+YSEN+ + LGL S K IG DVRTLFT SS L KA
Sbjct: 97 MLAIEEPTFRIISYSENSMDFLGLNTLSETTQLKS---LIGVDVRTLFTPPSSASLAKAA 153
Query: 162 GAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAV 221
+REI+LLNPIW+HS++ K FYAILHR+DVGIVIDLEP R+ DPALS+AGAVQSQKLAV
Sbjct: 154 MSREISLLNPIWVHSRSAQKTFYAILHRIDVGIVIDLEPTRSGDPALSLAGAVQSQKLAV 213
Query: 222 RAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYF 281
RAIS+LQSLPGGDI +LCDTVVE V++LTGYDRVMVY+FH+D+HGEVV+E +R DLEPY
Sbjct: 214 RAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRRSDLEPYL 273
Query: 282 GLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHA 341
GLHYPATDIPQA+RFLFKQNRVR+I DC+A + VIQ E L QPLCLV STLR+PHGCH
Sbjct: 274 GLHYPATDIPQAARFLFKQNRVRIICDCNAKAVRVIQSEELKQPLCLVNSTLRSPHGCHL 333
Query: 342 QYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGLQLN 383
QYM NMG IASLA+AV+INGND + G ++ R + AFGLQL
Sbjct: 334 QYMVNMGCIASLAMAVVINGNDATKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLY 393
Query: 384 MELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPL 443
MELQLASQL+EK +LR QTLLCDMLLR++P GIVT SPSIMDL+KCDGAAL+Y G+ + L
Sbjct: 394 MELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSPSIMDLLKCDGAALHYGGRCWLL 453
Query: 444 GVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFL 503
GVTPTE+Q+KDI EWLLT HGDSTGLSTDSLADAGYP AA LGDAVCGMA A IT +DFL
Sbjct: 454 GVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPGAALLGDAVCGMATARITSKDFL 513
Query: 504 FWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSL 563
FWFRSHTAKE+KWGGAKHHPEDKDDG RMHPRSSFKAFLEVVKSRSLPW+ +E++AIHSL
Sbjct: 514 FWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKSRSLPWEVSEINAIHSL 573
Query: 564 QLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHG 623
QLI+RDSF+D E S+ K +V+AQ D E+QG++ELSSVA EMV+LIETATAPIF VD G
Sbjct: 574 QLIMRDSFQDIEDSSGKVMVHAQKYDSEMQGLNELSSVACEMVKLIETATAPIFGVDSSG 633
Query: 624 CVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRT 683
C+NGWNAK+AELT L +EAMGKSLV ++V+++ VDNLL AL+G+EDKNVE+KL+
Sbjct: 634 CINGWNAKIAELTELQAKEAMGKSLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKK 693
Query: 684 FGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSP 743
FG + A+++VVNAC+S+DYTN+IVGVCFVGQD+T +K+VMDKFI +QGDYKAIV S
Sbjct: 694 FGLNQQDSALYIVVNACTSRDYTNDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQSL 753
Query: 744 NPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFM 803
NPLIPPIFASD N CCSEWNT++EKLTGW R ++I KML GEVFG C LK D LT+F
Sbjct: 754 NPLIPPIFASDGNACCSEWNTSLEKLTGWMRHEVIRKMLPGEVFGGLCPLKSQDTLTRFT 813
Query: 804 IALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQA 863
I L+ A GQDTEKFPF FD++GK V+ LLTANKR + G ++G FCFLQI +P+ Q
Sbjct: 814 ILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQG 873
Query: 864 LTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEK 923
L + ++CF++ KELAYI QE+KNPL+G+ FT+ LLE T + QKQ LETS ACE+
Sbjct: 874 LG-DGPEYRECFSKFKELAYIRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACER 932
Query: 924 QMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKT 983
QM+ II D+D+ IE+GS+E EFLLG+V++AVVSQVMMLL+E+ LQL+ +IPEEIKT
Sbjct: 933 QMMSIIADIDMGIIEEGSMELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKT 992
Query: 984 LAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPG 1043
L + GDQ ++QQVL+DFL N+V ++PS++GW+EI + LK + +H +FRM G
Sbjct: 993 LPLSGDQIKLQQVLSDFLHNIVHHAPSSDGWIEIKISTGLKMIQDFNEFIHLQFRMTHIG 1052
Query: 1044 EGLPPELVQDMFHSS-RWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
+GLPP+L+QDMF +W TQEGLGL++ RK+L MNG VQY+RE +CYFL+ +L
Sbjct: 1053 QGLPPDLIQDMFEGGDQWNTQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLVEIDLKNR 1112
Query: 1103 RRGSK 1107
R K
Sbjct: 1113 RAREK 1117
>gi|159147355|gb|ABW91071.1| phytochrome-4 [Ceratodon purpureus]
Length = 1125
Score = 1463 bits (3787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/1125 (62%), Positives = 870/1125 (77%), Gaps = 43/1125 (3%)
Query: 14 SQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR- 72
S + SSG S +++ H S +AQ T DA+L AV+E+S SG SFDYS+SV
Sbjct: 3 STKLSYSSGAS-VKSKH--------SVRVAQTTADAKLFAVYEESNNSGDSFDYSKSVGQ 53
Query: 73 ----TMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQ 128
+ VP Q ++AYL ++QRGG Q FGC IAV+E TFRVIAYSENA E+L L PQ
Sbjct: 54 AAKPAVQAQVPAQAVTAYLQRMQRGGLTQTFGCMIAVEENTFRVIAYSENAPELLDLMPQ 113
Query: 129 SVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILH 188
+VP++ +QE+L IGTD R+LFT SS LE+A ++T++NPI +H++++GKPFYAI+H
Sbjct: 114 AVPSVGQQEVLGIGTDARSLFTPSSVAALERAASTHDLTMVNPISVHTRSSGKPFYAIVH 173
Query: 189 RVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
R+DVG+V+D EP R D +S AG + S KLA +AI++LQSLPGGDI LLCDTVVE VR+
Sbjct: 174 RIDVGVVMDFEPVRPNDVVISTAGTLHSHKLAAKAIARLQSLPGGDIGLLCDTVVEEVRE 233
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVM Y+FH+DEHGEV+AE +R DLE Y GLHYP+TDIPQASRFLF +NRVRMI D
Sbjct: 234 LTGYDRVMAYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIAD 293
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P VIQD+ L QP+ L GSTLRAPHGCHAQYM NMGS+AS+ LAVI+N +++
Sbjct: 294 CCAPPXKVIQDKDLRQPVTLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVNDQEDDFGV 353
Query: 369 GRSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
+ RLW FGLQLNME++L +Q+ EKH+LRTQT
Sbjct: 354 QQKGRRLWGLVVCHHTSARTISYPLRCACEFLMQVFGLQLNMEVELQAQMREKHILRTQT 413
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDMLLRD+P GIV+QSP+IMDLVKCDGAALYY +++ LG+TP+E QIKD+ EWLL
Sbjct: 414 LLCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYNDRFWLLGITPSEQQIKDVAEWLLEN 473
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSLADAGYP A LGDAVCGMA A I+ DFLFWFRSHTAKEIKWGGAK
Sbjct: 474 HKDSTGLSTDSLADAGYPSANLLGDAVCGMAAARISPSDFLFWFRSHTAKEIKWGGAKQE 533
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV 582
++KDDG++M PRSS AFLEVVK RSLPW++ EMDAIHSLQLILR SF++ + +SK++
Sbjct: 534 ADEKDDGRKMTPRSSLNAFLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQEIDGDSSKSM 593
Query: 583 VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEE 642
++A+L D++LQG+DELS+VA EMVRLIETATAPI AVD +G +NGWNAKVAELTGL V +
Sbjct: 594 IHARLHDMKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGD 653
Query: 643 AMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSS 702
AMG+SLV+DL+ E E+V+ LL+ AL+GEE++N+E++LRTFG + K AV ++VNACSS
Sbjct: 654 AMGRSLVNDLILDESVEVVERLLYLALQGEEEQNIEVQLRTFGPQKSKGAVILIVNACSS 713
Query: 703 KDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
+D N+VGVCFVGQDVT QK+V DKF I GDYK+IV +PNPLIPPIF SDE C+EW
Sbjct: 714 RDVQENVVGVCFVGQDVTGQKMVHDKFTRIHGDYKSIVQNPNPLIPPIFGSDELGSCTEW 773
Query: 763 NTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFP 819
+ +MEKLTGW R +++GKMLVGEVFG CCRLKG DA+TKFMI ++NA GQDT+K+P
Sbjct: 774 SPSMEKLTGWKREEVLGKMLVGEVFGMQQMCCRLKGQDAVTKFMIVINNAMDGQDTDKYP 833
Query: 820 FPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLK 879
F FDRNGK+V+ALLTANKR + +G I G FCFL IASPEL QALTVQR EK FA+LK
Sbjct: 834 FSFFDRNGKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLK 893
Query: 880 ELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIED 939
ELAYI QEIKNPL G+ FT +L+E TDL+++QKQ ++TSA CE+Q+ KI+ D+DLESIED
Sbjct: 894 ELAYIRQEIKNPLYGIMFTRNLMEDTDLSDEQKQFMDTSAVCERQLRKILDDMDLESIED 953
Query: 940 GSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLAD 999
G LE E AEF +GS+++AVVSQ M+ RE+ LQLIR+ P EIK + ++GDQ R+QQVLAD
Sbjct: 954 GYLELETAEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIKNMCLFGDQVRLQQVLAD 1013
Query: 1000 FLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR 1059
FLLN VR++PS+EGWV I V PT K+ G +VH EFR+ PG GLP ELV +MF R
Sbjct: 1014 FLLNAVRFTPSSEGWVGIKVVPTKKRLGGGFHVVHLEFRVTHPGSGLPEELVHEMFDRGR 1073
Query: 1060 WMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
MTQEGLGLSMCRK++KLMNGEV+YIR++ + YFL+ ELP+ R
Sbjct: 1074 GMTQEGLGLSMCRKLVKLMNGEVKYIRDTGKSYFLVNLELPLTVR 1118
>gi|168029421|ref|XP_001767224.1| phytochrome 5b3 [Physcomitrella patens subsp. patens]
gi|162681479|gb|EDQ67905.1| phytochrome 5b3 [Physcomitrella patens subsp. patens]
Length = 1131
Score = 1459 bits (3776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 701/1121 (62%), Positives = 867/1121 (77%), Gaps = 42/1121 (3%)
Query: 14 SQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV-- 71
S + SSGTS +++ H S + Q T DA+L AV+E+S +SG SFDYS+SV
Sbjct: 3 STKLSYSSGTS-VKSKH--------SVRVQQTTADAKLQAVYEESNDSGDSFDYSKSVGQ 53
Query: 72 --RTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS 129
++ VP Q ++AYL ++QRGG Q FGC +AV+E+TFRVIAYSENA EML L PQ+
Sbjct: 54 ATKSTVQQVPAQAVTAYLQRMQRGGLTQNFGCMLAVEESTFRVIAYSENAPEMLDLMPQA 113
Query: 130 VPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHR 189
VP++ +E+L IGTD R LFT SS+ LE+A ++T++NPI +HS+N+GKPFYAI+HR
Sbjct: 114 VPSVGLKEVLGIGTDARLLFTPSSASTLERAAATSDLTMVNPISVHSRNSGKPFYAIVHR 173
Query: 190 VDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQL 249
+DVGIVID EP R+ D +S AGA+ S KLA +A+S+LQSLPGGDI LLCD VVE VR+L
Sbjct: 174 IDVGIVIDFEPVRSNDVVISTAGALHSHKLAAKAVSRLQSLPGGDIGLLCDAVVEEVREL 233
Query: 250 TGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDC 309
TGYDRVM Y+FH+DEHGEV+AE +R DLE Y GLHYP+TDIPQASRFLF +NRVRMI DC
Sbjct: 234 TGYDRVMAYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADC 293
Query: 310 HATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG 369
A P+ VIQD+ L QP+ L GSTLRAPHGCHAQYM NMGS+AS+ LAVI++ +E+
Sbjct: 294 CAPPVKVIQDKDLRQPITLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVHDQEEDFGVQ 353
Query: 370 RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTL 403
+ RLW FGLQLNME++L +Q+ EKH+LRTQTL
Sbjct: 354 QKGRRLWGLVVCHHTSPRTISFPLRSACEFLMQVFGLQLNMEVELQAQMKEKHILRTQTL 413
Query: 404 LCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYH 463
LCDMLLRD+P GIV+QSP+IMDLVKCDGAALYY+ +++ LG TP+E QI++I WLL +H
Sbjct: 414 LCDMLLRDAPVGIVSQSPNIMDLVKCDGAALYYENQFWLLGTTPSEEQIEEIAAWLLEHH 473
Query: 464 GDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHP 523
DSTGLSTDSLADAGYP A LGDAVCGMA A I+ +DFL WFRSH+AKEIKWGGAKH
Sbjct: 474 KDSTGLSTDSLADAGYPGANLLGDAVCGMAAARISSKDFLLWFRSHSAKEIKWGGAKHDA 533
Query: 524 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVV 583
ED+DD ++M PRSSF AFLEVVK RS+PW++ EMDAIHSLQLILR SF+D + S K ++
Sbjct: 534 EDRDDSRKMTPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDVDGSGGKTMI 593
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+++L DL+LQG+DELS+VA EMVRLIETATAPI AVD +G +NGWNAKVAELTGL V EA
Sbjct: 594 HSRLHDLKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGEA 653
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
MG+SLV DL+ +EY E+V+ LL+ AL+GEE++N+E+ L+TFGA+ K AV +VVNACSS+
Sbjct: 654 MGRSLVKDLILEEYVEVVERLLYLALQGEEEQNIEVSLKTFGAQKAKGAVILVVNACSSR 713
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D N+VGVCFVGQDVT QK+V DKF I GDYK+IV SPNPLIPPIF SDE C EW+
Sbjct: 714 DVQENVVGVCFVGQDVTGQKMVHDKFTRIHGDYKSIVQSPNPLIPPIFGSDELGYCIEWS 773
Query: 764 TAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPF 820
+MEKLTGW R +++GKMLVGE+FG CCRLKG DA+TKFMI L+NA GQDT+K+PF
Sbjct: 774 PSMEKLTGWKREEVLGKMLVGEIFGVHQMCCRLKGQDAVTKFMIVLNNAMDGQDTDKYPF 833
Query: 821 PLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKE 880
DR GK V+ALLTANKR + +G I G FCFL IASPEL QALTVQR EK FA+LKE
Sbjct: 834 SFHDRQGKLVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKE 893
Query: 881 LAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDG 940
LAYI QEIKNPL G+ FT +L+E TDL+++QKQ ++TSA CE+Q+ KI+ D+DLESIEDG
Sbjct: 894 LAYIRQEIKNPLYGIMFTRNLMEDTDLSDEQKQYMDTSAVCERQLRKILDDMDLESIEDG 953
Query: 941 SLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADF 1000
LE E EF +GS+++AVVSQ M+ RE+ LQLIR+ P EI+ + ++GDQ R+QQVLADF
Sbjct: 954 YLELETMEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIQGMCLFGDQVRLQQVLADF 1013
Query: 1001 LLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRW 1060
LLN VR++PS+EGWV I V PT K+ G +VH EFR+ PG GLP ELV +MF R
Sbjct: 1014 LLNAVRFTPSSEGWVGIKVVPTRKRLGGGFHVVHLEFRVTHPGSGLPEELVHEMFDRGRG 1073
Query: 1061 MTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
MTQEGLGLSMCRK++KLMNGEV+YIR++ + FL+ ELP+
Sbjct: 1074 MTQEGLGLSMCRKLVKLMNGEVKYIRDTGKSCFLVSLELPL 1114
>gi|225463382|ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera]
gi|183239020|gb|ACC60968.1| phytochrome E [Vitis vinifera]
Length = 1124
Score = 1454 bits (3765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/1085 (64%), Positives = 853/1085 (78%), Gaps = 23/1085 (2%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGC 101
IAQY DARL A FEQSGESGKSF+YS+SV SVPE QI AYLS++QRGG +QPFGC
Sbjct: 37 IAQYNADARLLAEFEQSGESGKSFNYSRSVMNAPESVPEDQIIAYLSRVQRGGLVQPFGC 96
Query: 102 TIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAF 161
+A++E TFR+I+YSEN+ + LGL S K IG DVRTLFT SS L KA
Sbjct: 97 MLAIEEPTFRIISYSENSMDFLGLNTLSETTQLKS---LIGVDVRTLFTPPSSASLAKAA 153
Query: 162 GAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAV 221
+REI+LLNPIW+HS++ K FYAILHR+DVGIVIDLEP R+ D ALS+AGAVQSQKLAV
Sbjct: 154 MSREISLLNPIWVHSRSAQKTFYAILHRIDVGIVIDLEPTRSGDSALSLAGAVQSQKLAV 213
Query: 222 RAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYF 281
RAIS+LQSLPGGDI +LCDTVVE V++LTGYDRVMVY+FH+D+HGEVV+E +R DLEPY
Sbjct: 214 RAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRRSDLEPYL 273
Query: 282 GLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHA 341
GLHYPATDIPQA+RFLFKQNRVR+I DC+A + VIQ E L QPLCLV STLR+PHGCH
Sbjct: 274 GLHYPATDIPQAARFLFKQNRVRIICDCNAKAVRVIQSEELKQPLCLVNSTLRSPHGCHL 333
Query: 342 QYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGLQLN 383
QYM NMG IASLA+AV+INGND + G ++ R + AFGLQL
Sbjct: 334 QYMFNMGCIASLAMAVVINGNDATKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLY 393
Query: 384 MELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPL 443
MELQLASQL+EK +LR QTLLCDMLLR++P GIVT SPSIMDL+KCDGAALYY G+ + L
Sbjct: 394 MELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSPSIMDLLKCDGAALYYGGRCWLL 453
Query: 444 GVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFL 503
GVTPTE+Q+KDI EWLLT HGDSTGLSTDSLADAGYP AA LGDAVCGMA A IT +DFL
Sbjct: 454 GVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPGAALLGDAVCGMATARITSKDFL 513
Query: 504 FWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSL 563
WFRSHTAKE+KWGGAKHHPEDKDDG RMHPRSSFKAFLEVVKSRSLPW+ ++++AIHSL
Sbjct: 514 LWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKSRSLPWEVSDINAIHSL 573
Query: 564 QLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHG 623
QLI+RDSF+D E S+ K +V+ Q D E+QG++EL SVA EMV+LIETATAPIF VD G
Sbjct: 574 QLIMRDSFQDIEDSSGKVMVHTQKYDSEMQGLNELGSVACEMVKLIETATAPIFGVDSSG 633
Query: 624 CVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRT 683
C+NGWNAK+AELTGL +EAMGKSLV ++V+++ VDNLL AL+G+EDKNVE+KL+
Sbjct: 634 CINGWNAKIAELTGLQAKEAMGKSLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKN 693
Query: 684 FGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSP 743
FG + A+++VVNAC+S+DYTN+IVGVCFVGQD+T +K+VMDKFI +QGDYKAIV
Sbjct: 694 FGLNQQDSALYIVVNACTSRDYTNDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQCL 753
Query: 744 NPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFM 803
NPLIPPIFASD N CCSEWNT++EKLTG R ++I KML GEVFG C LK D LT+F
Sbjct: 754 NPLIPPIFASDGNACCSEWNTSLEKLTGCMRHEVIRKMLPGEVFGGLCPLKSQDTLTRFT 813
Query: 804 IALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQA 863
I L+ A GQDTEKFPF FD++GK V+ LLTANKR + G ++G FCFLQI +P+ Q
Sbjct: 814 ILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQG 873
Query: 864 LTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEK 923
L + ++CF++ KELAYI QE+KNPL+G+ FT+ LLE T + QKQ LETS ACE+
Sbjct: 874 LG-HGPEYRECFSKFKELAYIRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACER 932
Query: 924 QMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKT 983
QM+ II D+D+ IE+GS+E EFLLG+V++AVVSQVMMLL+E+ LQL+ +IPEEIKT
Sbjct: 933 QMMSIIADIDMGIIEEGSMELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKT 992
Query: 984 LAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPG 1043
L + GDQ ++QQVL+DFL N+V ++PS++GW+EI + LK + VH +FRM G
Sbjct: 993 LPLSGDQIKLQQVLSDFLHNIVHHAPSSDGWIEIKISTGLKMIQDFNEFVHLQFRMTHIG 1052
Query: 1044 EGLPPELVQDMFHSS-RWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMP 1102
+GLPP+L+QDMF +W TQEGLGL++ RK+L MNG VQY+RE +CYFL+ +L
Sbjct: 1053 QGLPPDLIQDMFEGGDQWNTQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLVDIDLKNR 1112
Query: 1103 RRGSK 1107
R K
Sbjct: 1113 RAREK 1117
>gi|2499554|sp|Q39557.1|PHY2_CERPU RecName: Full=Phytochrome 2
gi|1314837|gb|AAB67863.1| phytochrome photoreceptor CERPU;PHY0;2 [Ceratodon purpureus]
Length = 1121
Score = 1454 bits (3763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 692/1114 (62%), Positives = 862/1114 (77%), Gaps = 38/1114 (3%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
S T++ ++ H S +AQ T DA L AV+E SG+SG SFDYS+SV + SVP
Sbjct: 9 SSTTSAKSKH--------SVRVAQTTADAALEAVYEMSGDSGDSFDYSKSVGQSAESVPA 60
Query: 81 QQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILT 140
++AYL ++QRGG IQ FGC +AV+E F VIAYSENA E L L PQ+VP++ + ++L
Sbjct: 61 GAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDVLG 120
Query: 141 IGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP 200
IGTD+RTLFT SS LEKA ++I+LLNPI +H + +GKP YAI HR+D+GIVID E
Sbjct: 121 IGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDFEA 180
Query: 201 ARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRF 260
+ D ++S AGA+QS KLA +AI++LQ+LPGGDI LLCDTVVE VR+LTGYDRVM Y+F
Sbjct: 181 VKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKF 240
Query: 261 HEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDE 320
HEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF +NRVR+I DC A+P+ +IQD
Sbjct: 241 HEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQDP 300
Query: 321 GLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-LWA-- 377
+ QP+ L GSTLRAPHGCHAQYM NMGSIASL +AVIIN N+E++ G R LW
Sbjct: 301 DIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWGLV 360
Query: 378 ------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSP 413
FG+QLNME++LA+QL EKH+LRTQTLLCDMLLRD+P
Sbjct: 361 VCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRDAP 420
Query: 414 AGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDS 473
GIV+Q+P+IMDLVKCDGAALYY +++ LG TPTE QIKDI EWLL YH DSTGLSTDS
Sbjct: 421 IGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLSTDS 480
Query: 474 LADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMH 533
LADA YP A LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKH P +KDDG++MH
Sbjct: 481 LADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRKMH 540
Query: 534 PRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQ 593
PRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR SF+D + S++K +++A+L DL+L
Sbjct: 541 PRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLH 600
Query: 594 GVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLV 653
G+DELS VA EMVRLIETATAPI AVD G +NGWNAK+A +TGL V EAMG+SLV DLV
Sbjct: 601 GMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKDLV 660
Query: 654 YKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVC 713
E +V+ LL+ A +GEE++NVEIKL+TFG + K+AV ++VNACSS+D ++++VGVC
Sbjct: 661 LDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSRDVSDSVVGVC 720
Query: 714 FVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWS 773
FVGQDVT QK+ MDKF IQGDYK IV +P+PLIPPIF DE C EWN AME LTGW
Sbjct: 721 FVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWNPAMEALTGWK 780
Query: 774 RGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYV 830
+++GK+LVGE+FG CCRLK D++TKFMI+L+NA G +T+KF F +R GK+V
Sbjct: 781 HDEVVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSFSFCNREGKFV 840
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+ALL+ NKR N +G I G FCFLQIAS ELQQALTVQR EK A+LKELAYI QEIKN
Sbjct: 841 EALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKELAYIRQEIKN 900
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PL G++FT LLE TDL++DQKQ L+TSA CE+Q+ K++ D+DLESIEDG LE + AEF
Sbjct: 901 PLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFE 960
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
+G+V++AV+SQ M RE+ LQ+IR+ P EI T+ ++GDQ R+QQVL+DFL+N +R++PS
Sbjct: 961 MGTVMDAVISQGMTTSREKGLQIIRETPREISTMRLFGDQIRLQQVLSDFLINAIRFTPS 1020
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSM 1070
+EGWV+I V PT K+ ++H EFR+ PG GLP ELV +M+ ++ MTQEGLGL+M
Sbjct: 1021 SEGWVKIKVVPTRKRLGGNVHVMHLEFRVSHPGGGLPDELVLEMYDRAKGMTQEGLGLNM 1080
Query: 1071 CRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
CRK+++LMNG+VQY+RE+ +CYF++ ELPM +R
Sbjct: 1081 CRKLVRLMNGDVQYVRENAQCYFVVYVELPMAQR 1114
>gi|25986851|gb|AAM94956.1| phytochrome [Ceratodon purpureus]
Length = 1126
Score = 1451 bits (3755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/1127 (62%), Positives = 872/1127 (77%), Gaps = 46/1127 (4%)
Query: 14 SQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRT 73
S A SSG S I++ H S +AQ T DA+L AV+E+S +SG SFDYS+SV
Sbjct: 3 SAKMAYSSG-SGIKSKH--------SVRVAQTTSDAKLQAVYEESNDSGDSFDYSKSVAQ 53
Query: 74 MSHS-----VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQ 128
+ S VP Q ++AYL ++QRGG Q FGC +AV+E TFRVIAYSENA E+L + PQ
Sbjct: 54 AAKSTGQQQVPAQAVTAYLQRMQRGGLTQTFGCMLAVEENTFRVIAYSENAPELLDVMPQ 113
Query: 129 SVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILH 188
+VP+L +Q++L IGTD R+LFT SS+ LE+A GA +++L+NPI +HS+ +GKPFYAI+H
Sbjct: 114 AVPSLGQQDVLGIGTDARSLFTPSSATALERAAGAADLSLVNPISVHSRASGKPFYAIIH 173
Query: 189 RVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
R+DVGIV+ EP R D +S AG + S KLA +AI++LQ+L GGDI LLCDTVVE VR+
Sbjct: 174 RIDVGIVMGFEPVRPNDVIVSTAGTLHSHKLAAKAIARLQALSGGDIGLLCDTVVEEVRE 233
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVM Y+FHEDEHGEV+AE +R DLEPY GLHYP+TDIPQASRFLF +NRVRMIVD
Sbjct: 234 LTGYDRVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPSTDIPQASRFLFMKNRVRMIVD 293
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQD+ L QP+ L GSTLRAPHGCHAQYM NMGS+AS+ +AVI N + E+ G
Sbjct: 294 CWAPPVKVIQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASVTMAVIXN-DQEDDFG 352
Query: 369 GRSTT--RLWA--------------------------FGLQLNMELQLASQLSEKHVLRT 400
G+ T RLW FGLQLNME++L +Q EKH+LRT
Sbjct: 353 GQQTRARRLWGLVVCHHTSARTISFPLRSACEFLMQVFGLQLNMEVELENQKREKHILRT 412
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QT+LCDMLLRD+P GIV+Q P+IMDLVKCDGAALYY +++ LG+TP+E QI++I WLL
Sbjct: 413 QTMLCDMLLRDAPVGIVSQCPNIMDLVKCDGAALYYGKRFWLLGITPSEEQIEEIANWLL 472
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
+H DSTGLSTDSLADAGYP A LGDAVCGMA A IT DFLFWFRSHTAKEIK GGAK
Sbjct: 473 EHHQDSTGLSTDSLADAGYPGANLLGDAVCGMAAARITPTDFLFWFRSHTAKEIKRGGAK 532
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
H +DKDDG++M PRSSF AFLEV+K RS+PW++ EMDAIHSLQLILR SF+D + S++K
Sbjct: 533 HEADDKDDGRKMTPRSSFNAFLEVMKRRSVPWEDIEMDAIHSLQLILRGSFQDIDDSDTK 592
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
+++A+L DL+LQG+DELS+VA EMVRLIETATAPI AVD +G +NGWNAKVAELTGL V
Sbjct: 593 TMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPV 652
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
+AMG+SLV DL+ E E+V+ LL+ AL+G+E+++VEI+LRTFG + K AV ++VNAC
Sbjct: 653 GDAMGRSLVQDLIVDESVEVVERLLYLALQGDEEQDVEIQLRTFGPQKGKGAVILIVNAC 712
Query: 701 SSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCS 760
SS+D +N+VGVCFVGQDVT QK V DKF I GDYK+IV +PNPLIPPIF SDE C+
Sbjct: 713 SSRDVQDNVVGVCFVGQDVTSQKQVHDKFTRIHGDYKSIVQNPNPLIPPIFGSDELGYCT 772
Query: 761 EWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEK 817
EW+ +MEKLTGW R +++GKMLVGEVFG+ CCRLKG D++TKFMI L+NA GQDT+K
Sbjct: 773 EWSPSMEKLTGWKRDEVLGKMLVGEVFGTQQICCRLKGQDSVTKFMIVLNNAMDGQDTDK 832
Query: 818 FPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFAR 877
+PF +DR GK+V+ALLTANKR + +G I G FCFL IASPEL QALTVQR EK FA+
Sbjct: 833 YPFSFYDRQGKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAK 892
Query: 878 LKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESI 937
LKELAYI QEIKNPL G+ FT +L+E TDL+++QKQ ++TSA CE+Q+ KI+ D+DLESI
Sbjct: 893 LKELAYIRQEIKNPLYGIMFTRNLMEDTDLSDEQKQFMDTSAVCERQLRKILDDMDLESI 952
Query: 938 EDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVL 997
EDG LE E AE LGS+++AVVSQ M+ RE+ LQLIR+ P EI ++++GDQ R+Q VL
Sbjct: 953 EDGYLELETAESELGSMMDAVVSQGMITSREKGLQLIRETPREINDMSLFGDQVRLQHVL 1012
Query: 998 ADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS 1057
ADFLLN VR +PS+EGWV I V PT K+ G +VH EFR+ PG GLP ELV +MF
Sbjct: 1013 ADFLLNAVRLTPSSEGWVGIKVVPTKKRLGGGFHVVHLEFRVAHPGSGLPEELVHEMFDR 1072
Query: 1058 SRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
R MTQEGLGLSMCRK++KLMNGEV+YIR++ + YFL+ ELP+ R
Sbjct: 1073 GRGMTQEGLGLSMCRKLVKLMNGEVKYIRDTGKSYFLVNLELPLTVR 1119
>gi|1674478|gb|AAB19058.1| phytochrome photoreceptor [Ceratodon purpureus]
Length = 1121
Score = 1451 bits (3755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/1114 (62%), Positives = 860/1114 (77%), Gaps = 38/1114 (3%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
S T++ ++ H S +AQ T DA L AV+E SG+SG SFDYS+SV + SVP
Sbjct: 9 SSTTSAKSKH--------SVRVAQTTADAALEAVYEMSGDSGDSFDYSKSVGQSAESVPA 60
Query: 81 QQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILT 140
++AYL ++QRGG IQ FGC +AV+E F VIAYSENA E L L PQ+VP++ + ++L
Sbjct: 61 GAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDVLG 120
Query: 141 IGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP 200
IGTD+RTLFT SS LEKA ++I+LLNPI +H + +GKP YAI HR+D+GIVID E
Sbjct: 121 IGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDFEA 180
Query: 201 ARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRF 260
+ D ++S AGA+QS KLA +AI++LQ+LPGGDI LLCDTVVE VR+LTGYDRVM Y+F
Sbjct: 181 VKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKF 240
Query: 261 HEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDE 320
HEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF +NRVR+I DC A+P+ +IQD
Sbjct: 241 HEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQDP 300
Query: 321 GLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-LWA-- 377
+ QP+ L GSTLRAPHGCHAQYM NMGSIASL +AVIIN N+E++ G R LW
Sbjct: 301 DIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWGLV 360
Query: 378 ------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSP 413
FG+QLNME++LA+QL EKH+LRTQTLLCDMLLRD+P
Sbjct: 361 VCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRDAP 420
Query: 414 AGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDS 473
GIV+Q+P+IMDLVKCDGAALYY +++ LG TPTE QIKDI EWLL YH DSTGLSTDS
Sbjct: 421 IGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLSTDS 480
Query: 474 LADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMH 533
LAD YP A LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKH P +KDDG++MH
Sbjct: 481 LADRNYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRKMH 540
Query: 534 PRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQ 593
PRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR SF+D + S++K +++A+L DL+L
Sbjct: 541 PRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLH 600
Query: 594 GVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLV 653
G+DELS VA EMVRLIETATAPI AVD G +NGWNAK+A +TGL V EAMG+SLV DLV
Sbjct: 601 GMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKDLV 660
Query: 654 YKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVC 713
E +V+ LL+ A +GEE++NVEIKL+TFG + K+AV ++VNACSS+D ++++VGVC
Sbjct: 661 LDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSRDVSDSVVGVC 720
Query: 714 FVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWS 773
FVGQDVT QK+ MDKF IQGDYK IV +P+PLIPPIF DE C EWN AME LTGW
Sbjct: 721 FVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWNPAMEALTGWK 780
Query: 774 RGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYV 830
+++GK+LVGE+FG CCRLK D++TKFMI+L+NA G +T+KF F +R GK+V
Sbjct: 781 HDELVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSFSFCNREGKFV 840
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+ALL+ NKR N +G I G FCFLQIAS ELQQALTVQR EK A+LKELAYI QEIKN
Sbjct: 841 EALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKELAYIRQEIKN 900
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PL G++FT LLE TDL++DQKQ L+TSA CE+Q+ K++ D+DLESIEDG LE + AEF
Sbjct: 901 PLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFE 960
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
+G+V++AV+SQ M RE+ LQ+IR+ P EI T+ ++GDQ R+QQVL+DFL+N +R++PS
Sbjct: 961 MGTVMDAVISQGMTTSREKGLQIIRETPREISTMRLFGDQIRLQQVLSDFLINAIRFTPS 1020
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSM 1070
+EGWV+I V PT K+ ++H EFR+ PG GLP ELV +M+ + MTQEGLGL+M
Sbjct: 1021 SEGWVKIKVVPTRKRLGGNVHVMHLEFRVSHPGGGLPDELVLEMYDRGKGMTQEGLGLNM 1080
Query: 1071 CRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
CRK+++LMNG+VQY+RE+ +CYF++ ELPM +R
Sbjct: 1081 CRKLVRLMNGDVQYVRENAQCYFVVYVELPMAQR 1114
>gi|168051425|ref|XP_001778155.1| phytochrome 1 [Physcomitrella patens subsp. patens]
gi|139001617|dbj|BAF51707.1| phytochrome1 [Physcomitrella patens]
gi|162670477|gb|EDQ57045.1| phytochrome 1 [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1448 bits (3749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/1101 (63%), Positives = 851/1101 (77%), Gaps = 31/1101 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV-RTMSHSVPEQQISAYLSKIQRGGHIQ 97
S +AQ T DA L AVFE+SG+SG SFDYS+SV ++ + S+P ++AYL ++QRGG Q
Sbjct: 20 SVRVAQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAESLPSGAVTAYLQRMQRGGLTQ 79
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
FGC IAV+ FRVIAYSENA E+L L PQ+VP++ + + L IGTDVRTLFT+SS L
Sbjct: 80 SFGCMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASL 139
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
EKA A+E++LLNPI ++ + +GK YAI HR+D+GIVID E +T+D +S AGA+QS
Sbjct: 140 EKAAEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSH 199
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQ+LPGGDI LLCDTVVE VR+LTGYDRVM YRFHEDEHGEVVAE +R DL
Sbjct: 200 KLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADL 259
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYP TDIPQASRFLF +N+VR+I DC A P+ VIQD L QP+ L GSTLR+PH
Sbjct: 260 EPYLGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPH 319
Query: 338 GCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-LWA------------------- 377
GCHAQYM NMGSIASL +AVIIN N+E++ G R LW
Sbjct: 320 GCHAQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSA 379
Query: 378 -------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
FGLQLNME++LA+QL EKH+LRTQTLLCDMLLRD+P GIV+Q P+IMDLVKCD
Sbjct: 380 CGFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCD 439
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYY +++ LG TPTE+QIKDI EWLL YH DSTGLSTDSLADA YP A LGDAVC
Sbjct: 440 GAALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVC 499
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMA A IT +DFLFWFRSHTAKEIKWGGAKH P +KDDG++MHPRSSFKAFLEVVK RSL
Sbjct: 500 GMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVKRRSL 559
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW++ EMDAIHSLQLILR SF+D + S++K +++A+L DL+L +DELS VA EMVRLIE
Sbjct: 560 PWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIE 619
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
TATAPI AVD +G +NGWNAK+A++TGL V EAMG+SLV DLV E +V+ LL+ AL+
Sbjct: 620 TATAPILAVDSNGMINGWNAKIAQVTGLPVSEAMGRSLVKDLVTDESVAVVERLLYLALR 679
Query: 671 GEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFI 730
GEE++NVEIKL+TFG + K V ++VNACSS+D + N+VGVCFVGQDVT QK+ MDKF
Sbjct: 680 GEEEQNVEIKLKTFGTQTEKGVVILIVNACSSRDVSENVVGVCFVGQDVTGQKMFMDKFT 739
Query: 731 HIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG-- 788
IQGDYK IV +P+PLIPPIF +DE C EWN AME LTGW + +++GK+LVGE+FG
Sbjct: 740 RIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQ 799
Query: 789 -SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIV 847
CCR+K DA+TKFMIAL+ A GQ T+KF F FDR GKYV LL+ NKR N +G I
Sbjct: 800 MMCCRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVIT 859
Query: 848 GAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDL 907
G FCFLQIAS ELQQAL VQR EK A+LKELAYI QEIKNPL G++FT LLE TDL
Sbjct: 860 GVFCFLQIASSELQQALKVQRATEKVAVAKLKELAYIRQEIKNPLCGITFTRQLLEDTDL 919
Query: 908 TEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLR 967
++DQ+Q L+TSA CE+Q+ K++ D+DLESIEDG LE + AEF +G+V+NAV+SQ M R
Sbjct: 920 SDDQQQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFEMGTVMNAVISQGMTTSR 979
Query: 968 ERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSS 1027
E+ LQ+ R+ P EI T+ + GDQ R+QQVL+DFLLN VR++PS EGWV+I V PT K+
Sbjct: 980 EKGLQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEGWVKIKVVPTRKRLG 1039
Query: 1028 EGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRE 1087
+VH EFR+ PG GLP ELV +M+ + MTQEGLGL+MCRK+++LMNG+V Y+RE
Sbjct: 1040 GSVHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDVHYVRE 1099
Query: 1088 SERCYFLIIFELPMPRRGSKS 1108
+ +CYF++ ELPM +R S
Sbjct: 1100 AMQCYFVVNVELPMAQRDDAS 1120
>gi|168003331|ref|XP_001754366.1| phytochrome 5c [Physcomitrella patens subsp. patens]
gi|162694468|gb|EDQ80816.1| phytochrome 5c [Physcomitrella patens subsp. patens]
Length = 1124
Score = 1447 bits (3745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/1099 (62%), Positives = 853/1099 (77%), Gaps = 33/1099 (3%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV----RTMSHSVPEQQISAYLSKIQRGG 94
S + Q T DA+L AV+E+S +SG +F+YS+SV + VP Q +S+YL ++QRGG
Sbjct: 19 SVRVQQTTADAKLQAVYEESNDSGDAFNYSKSVGQAAKATVQQVPAQAVSSYLQRMQRGG 78
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
Q FGC +AV+E+TFRVIAYSENA EML L P +VP++ +Q++L IG D R+LFT SS+
Sbjct: 79 LTQTFGCMLAVEESTFRVIAYSENAPEMLDLVPHAVPSVGQQDVLGIGADARSLFTPSSA 138
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
LE+A +++++NPI +HS+++GKPFYAI+HR+DVG+VID EP R D +S AGA+
Sbjct: 139 SALERAASTSDLSMVNPISVHSRSSGKPFYAIVHRIDVGVVIDFEPVRPNDVIISTAGAL 198
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
S KLA +A+++LQSLPGGDI LLCD VVE VR+LTGYDRVM Y+FH+DEHGEV+AE +R
Sbjct: 199 HSHKLAAKAVARLQSLPGGDIGLLCDAVVEEVRELTGYDRVMAYKFHDDEHGEVLAEIRR 258
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLE Y GLHYP+TDIPQASRFLF +NRVRMI DC A P+ VIQD+ L QP+ L GSTLR
Sbjct: 259 SDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPPVKVIQDKDLRQPITLAGSTLR 318
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLWA----------------- 377
APHGCHAQYM NMGS+AS+ LAVI+N +E+ + RLW
Sbjct: 319 APHGCHAQYMGNMGSVASITLAVIVNDQEEDFGVQQKGRRLWGLVVCHHTSARTISFPLR 378
Query: 378 ---------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
FGLQLNME++L +Q+ EKH+LRTQTLLCDMLLRD+P GIV+QSP+IMDLVK
Sbjct: 379 SACEFLMQVFGLQLNMEVELQAQVKEKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVK 438
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAALYY +++ LG TPTE QI +I +WLL YH DSTGLSTDSLADAGYP A LGDA
Sbjct: 439 CDGAALYYGKRFWLLGTTPTEQQITEIADWLLEYHKDSTGLSTDSLADAGYPGANLLGDA 498
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA A IT +DFLFWFRSHTAKEIKWGGAKH ++KDDG++M PRSSF AFLEVVK R
Sbjct: 499 VCGMAAARITPKDFLFWFRSHTAKEIKWGGAKHDADEKDDGRKMAPRSSFNAFLEVVKRR 558
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
S+PW++ EMDAIHSLQLILR SF+D + S+ K +++A+L DL+LQG+DELS+VA EMVRL
Sbjct: 559 SVPWEDIEMDAIHSLQLILRGSFQDIDDSDGKTMIHARLHDLKLQGMDELSTVANEMVRL 618
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETAT PI AVD G +NGWNAKVAELTGL V +AMG+SLV DL+ +E E V+ LL+ A
Sbjct: 619 IETATVPILAVDSSGFINGWNAKVAELTGLPVGDAMGRSLVKDLILEESVEAVERLLYLA 678
Query: 669 LKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDK 728
L+GEE++NVE++L+TFG + K + ++VNACSS+D N+VGVCFVGQDVT QK+V DK
Sbjct: 679 LQGEEEQNVEVRLKTFGQQKSKGVLILIVNACSSRDVQENVVGVCFVGQDVTGQKMVHDK 738
Query: 729 FIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG 788
F I GDYK+IV +PNPLIPPIF DE C+EW+ +MEKLTGW R +++GKMLVGEVFG
Sbjct: 739 FTRIHGDYKSIVQNPNPLIPPIFGGDELGYCTEWSPSMEKLTGWKREEVLGKMLVGEVFG 798
Query: 789 ---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQ 845
CCRLKG DA+TKFMI L+NA GQDT+KFPF FDR GK+V+ALLTANKR + +
Sbjct: 799 VQLMCCRLKGQDAVTKFMIVLNNAMDGQDTDKFPFSFFDRQGKFVEALLTANKRTDADDY 858
Query: 846 IVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEAT 905
I G FCFL ASPEL QALTVQR EK FA+LKELAYI QEIKNPL G+ FT +L+E T
Sbjct: 859 ITGVFCFLHTASPELLQALTVQRATEKVAFAKLKELAYIRQEIKNPLYGIMFTRNLMEDT 918
Query: 906 DLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMML 965
DL+E+QKQ ++TSA CE+Q+ KI+ D+DLESIEDG LE E AEF +GS+++AVVSQ M+
Sbjct: 919 DLSEEQKQFMDTSAVCERQLRKILDDMDLESIEDGYLELETAEFDMGSMMDAVVSQGMIT 978
Query: 966 LRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQ 1025
RE+ LQLIR+ P EIK + ++GDQ R+QQVLAD+LLN VR++PS+EGWV I V T K+
Sbjct: 979 SREKGLQLIRETPREIKGMCLFGDQVRLQQVLADYLLNAVRFTPSSEGWVGIKVVSTKKR 1038
Query: 1026 SSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYI 1085
G +VH EFR+ PG GLP ELV +MF R MTQEGLGLSMCRK++KLMNGEV+YI
Sbjct: 1039 LVGGFHVVHLEFRVTHPGSGLPEELVCEMFDRGRGMTQEGLGLSMCRKLVKLMNGEVKYI 1098
Query: 1086 RESERCYFLIIFELPMPRR 1104
R++ + YFL+ ELP+ R
Sbjct: 1099 RDAGKSYFLVNLELPLAGR 1117
>gi|147775698|emb|CAN62723.1| hypothetical protein VITISV_030984 [Vitis vinifera]
Length = 1162
Score = 1439 bits (3726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 701/1086 (64%), Positives = 848/1086 (78%), Gaps = 24/1086 (2%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGC 101
IAQY DARL A FEQSGESGKSF+YS+SV SVPE QI AYLS+ QRGG +QPFGC
Sbjct: 37 IAQYNADARLLAEFEQSGESGKSFNYSRSVMNAPESVPEDQIIAYLSRXQRGGLVQPFGC 96
Query: 102 TIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAF 161
+A++E TFR+I+YSEN+ + LGL S K IG DVRTLFT SS L KA
Sbjct: 97 MLAIEEPTFRIISYSENSMDFLGLNTLSETTQLKS---LIGVDVRTLFTPPSSASLAKAA 153
Query: 162 GAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAV 221
+REI+LLNPIW+HS++ K FYAILHR+DVGIVIDLEP R+ D ALS+AGAVQSQKLAV
Sbjct: 154 MSREISLLNPIWVHSRSAQKTFYAILHRIDVGIVIDLEPTRSGDXALSLAGAVQSQKLAV 213
Query: 222 RAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYF 281
RAIS+LQSLPGGDI +LCDTVVE V++LTGYDRVMVY+FH+D+HGEVV+E +R DLEPY
Sbjct: 214 RAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRRSDLEPYL 273
Query: 282 GLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHA 341
GLHYPATDIPQA+RFLFKQN VR+I DC+A + VIQ E L QPLCLV STLR+PHGCH
Sbjct: 274 GLHYPATDIPQAARFLFKQNXVRIICDCNAKAVRVIQSEELKQPLCLVNSTLRSPHGCHL 333
Query: 342 QYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGLQLN 383
QYM NMG IASLA+AV+INGND + G ++ R + AFGLQL
Sbjct: 334 QYMXNMGCIASLAMAVVINGNDATKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLY 393
Query: 384 MELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPL 443
MELQLASQL+EK +LR QTLLCDMLLR++P GIVT SPSIMDL+KCDGAALYY G+ + L
Sbjct: 394 MELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSPSIMDLLKCDGAALYYGGRCWLL 453
Query: 444 GVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFL 503
GVTPTE+Q+KDI EWLLT HGDSTGLSTDSLADAGYP AA LGDAVCGMA A IT +DFL
Sbjct: 454 GVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPGAALLGDAVCGMATARITSKDFL 513
Query: 504 FWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSL 563
WFRSHTAKE+KWGGAKHHPEDKDDG RMHPRSSFKAFLEVVKSRSLPW+ + ++AIHSL
Sbjct: 514 XWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKSRSLPWEVSXINAIHSL 573
Query: 564 QLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHG 623
QLI+RDSF+D E S+ K +V+ Q D E+QG++EL SVA EMV+LIETATAPIF VD G
Sbjct: 574 QLIMRDSFQDIEDSSGKVMVHXQKYDSEMQGLNELXSVACEMVKLIETATAPIFGVDSSG 633
Query: 624 CVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRT 683
C+NGWNAK+AELT L +EAMGKSLV ++V+++ VDNLL AL+G+EDKNVE+KL+
Sbjct: 634 CINGWNAKIAELTXLQAKEAMGKSLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKN 693
Query: 684 FGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSP 743
FG + A+++VVNAC S+DYTN+IVGVCFVGQD+T +K+VMDKFI +QGDYKAIV
Sbjct: 694 FGLNQQDSALYIVVNACXSRDYTNDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQXL 753
Query: 744 NPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFM 803
NPLIPPIFASD N CCSEWNT++EKLTG R ++I KML GEVFG C LK D LT+F
Sbjct: 754 NPLIPPIFASDGNACCSEWNTSLEKLTGXMRHEVIRKMLPGEVFGGLCPLKSQDTLTRFT 813
Query: 804 IALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQA 863
I L+ A GQDTEKFPF FD++GK V+ LLTANKR + G ++G FCFLQI +P+ Q
Sbjct: 814 ILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQG 873
Query: 864 LTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEK 923
L + ++CF++ KELAYI QE+KNPL+G+ FT+ LLE T + QKQ LETS ACE+
Sbjct: 874 LG-HGPEYRECFSKFKELAYIRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACER 932
Query: 924 QMLKIIKDVDLESIEDG-SLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIK 982
QM+ II D+D+ IE+G S+E EFLLG+V++AVVSQVMMLL+E+ LQL+ +IPEEIK
Sbjct: 933 QMMSIIADIDMGIIEEGSSMELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIK 992
Query: 983 TLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCP 1042
TL + GDQ ++QQVL+DFL N+V ++PS++GW+EI + LK + +H +FRM
Sbjct: 993 TLPLSGDQIKLQQVLSDFLHNIVHHAPSSDGWIEIKISTGLKMIQDFNEFIHLQFRMTHI 1052
Query: 1043 GEGLPPELVQDMFHSS-RWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
G+GLPP+L+QDMF +W TQEGLGL++ RK+L MNG VQY+RE +CYFL+ +L
Sbjct: 1053 GQGLPPDLIQDMFEGGDQWNTQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLVDIDLKN 1112
Query: 1102 PRRGSK 1107
R K
Sbjct: 1113 RRAREK 1118
>gi|25986845|gb|AAM94953.1| phytochrome [Physcomitrella patens]
Length = 1123
Score = 1437 bits (3720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 692/1101 (62%), Positives = 848/1101 (77%), Gaps = 31/1101 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV-RTMSHSVPEQQISAYLSKIQRGGHIQ 97
S +AQ T DA L AVFE+SG+SG SFDYS+SV ++ + S+P ++AYL ++QRGG Q
Sbjct: 20 SVRVAQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAESLPSGAVTAYLQRMQRGGLTQ 79
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
FGC IAV+ FRVIAYSENA E+L L PQ+VP++ + + L IGTDVRTLFT+SS L
Sbjct: 80 SFGCMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASL 139
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
EKA A+E++LLNPI ++ + +GK YAI HR+D+GIVID E +T+D +S AGA+QS
Sbjct: 140 EKAAEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSH 199
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQ+LPGG+I LLCDTVVE VR+LTGYDRVM YRFHEDEHGEVVAE +R DL
Sbjct: 200 KLAAKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADL 259
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYP TDIPQASRFLF +N+VR+I DC A P+ VIQD L QP+ L GSTLR+PH
Sbjct: 260 EPYLGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPH 319
Query: 338 GCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-LWA------------------- 377
GCHAQYM NMGSIASL +AVIIN N+E++ G R LW
Sbjct: 320 GCHAQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSA 379
Query: 378 -------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
FGLQLNME++LA+QL EKH+LRTQTLLCDMLLRD+P GIV+Q P+IMDLVKCD
Sbjct: 380 CGFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCD 439
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYY +++ LG TPTE+QIKDI EWLL YH DSTGLSTDSLADA YP A LGDAVC
Sbjct: 440 GAALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVC 499
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMA A IT +DFLFWFRSHTAKEIKWGGAKH P +KDDG++MHPRSSFKAFLEVVK RSL
Sbjct: 500 GMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVKRRSL 559
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW++ EMDAIHSLQLILR SF+D + S++K +++A+L DL+L +DELS VA EMVRLIE
Sbjct: 560 PWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIE 619
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
TATAPI AVD +G +NGWNAK+A++TGL V EA G+SLV DLV E +V+ LL+ AL+
Sbjct: 620 TATAPILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLALR 679
Query: 671 GEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFI 730
GEE++NVEIKL+TFG + K V ++V+ACSS + N+VGVCFVGQDVT QK+ MDKF
Sbjct: 680 GEEEQNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVTGQKMFMDKFT 739
Query: 731 HIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG-- 788
IQGDYK IV +P+PLIPPIF +DE C EWN AME LTGW + +++GK+LVGE+FG
Sbjct: 740 RIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQ 799
Query: 789 -SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIV 847
CCR+K DA+TKFMIAL+ A GQ T+KF F FDR GKYV LL+ NKR N +G I
Sbjct: 800 MMCCRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVIT 859
Query: 848 GAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDL 907
G FCFLQIAS ELQQAL VQR EK A+LKELAYI QEIKNPL G++FT LLE TDL
Sbjct: 860 GVFCFLQIASSELQQALKVQRATEKVAVAKLKELAYIRQEIKNPLCGITFTRQLLEDTDL 919
Query: 908 TEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLR 967
++DQ+Q L+TSA CE+Q+ K++ D+DLESIEDG LE + AEF +G+V+NAV+SQ M R
Sbjct: 920 SDDQQQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFEMGTVMNAVISQGMTTSR 979
Query: 968 ERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSS 1027
E+ LQ+ R+ P EI T+ + GDQ R+QQVL+DFLLN VR++PS EGWV+I V PT K+
Sbjct: 980 EKGLQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEGWVKIKVVPTRKRLG 1039
Query: 1028 EGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRE 1087
+VH EFR+ PG GLP ELV +M+ + MTQEGLGL+MCRK+++LMNG+V Y+RE
Sbjct: 1040 GSVHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDVHYVRE 1099
Query: 1088 SERCYFLIIFELPMPRRGSKS 1108
+ +CYF++ ELPM +R S
Sbjct: 1100 AMQCYFVVNVELPMAQRDDAS 1120
>gi|139001625|dbj|BAF51709.1| phytochrome3 [Physcomitrella patens]
Length = 1122
Score = 1426 bits (3692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/1097 (62%), Positives = 849/1097 (77%), Gaps = 32/1097 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV-RTMSHSVPEQQISAYLSKIQRGGHIQ 97
S +AQ T DA LHAVFE+SG SG +FDYS+SV ++ + S+ ++AYL ++QRGG Q
Sbjct: 20 SVRVAQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGSLHTGAVTAYLQRMQRGGLTQ 79
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
FGC +AV+E FRVIAYSENA E L L PQ+VPN+ + L IGTDVRTLFT SS+ L
Sbjct: 80 SFGCMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASL 139
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
EKA +EI+LLNPI ++ ++ KP YAI HR+D+GIVID E D +S GA+QS
Sbjct: 140 EKAAETQEISLLNPITVYCRSK-KPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSH 198
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQ+LPGGDI LLCDTVVE VR+LTGYDRVM Y+FHEDEHGEVVAE +R DL
Sbjct: 199 KLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDL 258
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +NRVRMI DC A P+ ++QD L QP+ L GSTLR+PH
Sbjct: 259 EPYLGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPVKIVQDPNLRQPVSLAGSTLRSPH 318
Query: 338 GCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-LWA------------------- 377
GCHAQYM NMGSI+S+ +AVIIN N++++ G R LW
Sbjct: 319 GCHAQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKLWGLVVCHHTSPRTVPFPLRSA 378
Query: 378 -------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
FGLQLNME++LA+QL EKH+LRTQTLLCDMLLRD+P GIV+Q P+IMDLVKCD
Sbjct: 379 CEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQVPNIMDLVKCD 438
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYY +++ LG TPTE+QIKDI EWLL YH DSTGLSTDSLADA YP A LGDAVC
Sbjct: 439 GAALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVC 498
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMA A IT +DFLFWFRSHTAKEIKWGGAKH P +KDD ++MHPRSSFKAFLEVVK RSL
Sbjct: 499 GMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSSFKAFLEVVKRRSL 558
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW++ EMDAIHSLQLILR SF+D + S++K +++A+L DL+L +DELS VA EMVRLIE
Sbjct: 559 PWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIE 618
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
TATAPI AVD +G +NGWNAK+A+ TGL V EAMG+SLV DLV E E+V+ LL+ AL+
Sbjct: 619 TATAPILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLALR 678
Query: 671 GEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFI 730
GEE++ VEIKL+TFGA+ K AV ++VNAC+S+D + N+VGVCFVGQDVT QK+ MDKF
Sbjct: 679 GEEEQGVEIKLKTFGAQTVKGAVILIVNACASRDVSENVVGVCFVGQDVTGQKMFMDKFT 738
Query: 731 HIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG-- 788
IQGDYK IV +P+PLIPPIF +DE C EWN AME LTGW R ++IGK+LVGE+FG
Sbjct: 739 RIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGKLLVGEIFGMQ 798
Query: 789 -SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIV 847
CC++K DA+TKFMI+L++A GQ+T+KF FDR G+YV ALL+ NKR N +G I
Sbjct: 799 KMCCQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTNKRTNADGAIT 858
Query: 848 GAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDL 907
G CFLQIAS ELQQAL VQ+ EK A+LKELAYI QEIKNPL G++FT LLE TDL
Sbjct: 859 GVICFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITFTRQLLEDTDL 918
Query: 908 TEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLR 967
+ DQKQ L+TSA CE+Q+ K++ D+DLESIEDG LE + AEF + +V++AV+SQ M + R
Sbjct: 919 SNDQKQFLDTSAVCEQQLQKVLNDLDLESIEDGYLELDTAEFEMRTVMDAVISQGMTISR 978
Query: 968 ERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSS 1027
E+ LQ+IR+ P EI T+ ++GDQ R+QQVL+DFLLN VR++PS+EGWV+I V PT K+
Sbjct: 979 EKGLQIIRETPREIITMRLFGDQVRLQQVLSDFLLNAVRFTPSSEGWVKIKVVPTRKRLG 1038
Query: 1028 EGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRE 1087
+ ++H EFR+ PG GLP ELV +MF + MTQEGLGL++CRK+++LMNG+VQY+RE
Sbjct: 1039 GNEHVMHLEFRVSHPGAGLPEELVLEMFDKGKGMTQEGLGLNICRKLVRLMNGDVQYVRE 1098
Query: 1088 SERCYFLIIFELPMPRR 1104
+ +CYF++ ELP+ ++
Sbjct: 1099 AMQCYFVLYVELPLAQQ 1115
>gi|3724346|dbj|BAA33775.1| phytochrome 2 [Adiantum capillus-veneris]
Length = 1140
Score = 1424 bits (3687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 684/1104 (61%), Positives = 856/1104 (77%), Gaps = 45/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQS---GESG-KSFDYSQSVR-----TMSHSVPEQQISAYLSKIQR 92
+AQ T DA+LHAVFEQ+ G++G SFDY +S+ +S VP Q ++AYL ++QR
Sbjct: 33 VAQTTADAKLHAVFEQAQSEGDTGGSSFDYMRSIEDARGSVLSERVPAQAVTAYLQRMQR 92
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE-ILTIGTDVRTLFTS 151
GG IQPFGC +A++E +FRVIAYSENA EML L PQSVP++ Q +L IGTD RTLFT
Sbjct: 93 GGLIQPFGCMLALEEGSFRVIAYSENAAEMLDLMPQSVPSVGVQVLVLGIGTDARTLFTY 152
Query: 152 SSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPAL-SI 210
+S+ LEKA GA ++++LNPI +H +++ KPF AI+HR+DVG+VID EP R D A+ +
Sbjct: 153 ASAAALEKASGAVDVSMLNPITVHCRSSSKPFNAIVHRIDVGLVIDFEPVRPADVAVWAA 212
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
AGA+QS KLA +AIS+LQ+LP GDI LLCD+VVE VR+LTGYDRVM Y+FHEDEHGEV+A
Sbjct: 213 AGALQSHKLAAKAISRLQALPVGDIDLLCDSVVEEVRELTGYDRVMAYKFHEDEHGEVLA 272
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
E +R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC A P+ VIQD+ L QPL L G
Sbjct: 273 EIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRALPVRVIQDKELRQPLSLAG 332
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRS----TTRLWA--------- 377
STLRAPHGCH+QYMANMGSIASL +AV++N NDE+ V RS RLW
Sbjct: 333 STLRAPHGCHSQYMANMGSIASLVMAVVVNDNDED-VSNRSQQPKMRRLWGLVVCHHTTP 391
Query: 378 -----------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQS 420
FGLQLNMEL+LA+Q+ EKH+LRTQTLLCDMLLRD+P GIV++S
Sbjct: 392 RAVPFALRSACEFLMQVFGLQLNMELELAAQMREKHILRTQTLLCDMLLRDAPIGIVSES 451
Query: 421 PSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYP 480
P+IMDLVKCDGAALYY ++ LG TP E QIKD+ EWLL H DSTGLSTDSLADAGYP
Sbjct: 452 PNIMDLVKCDGAALYYGKNFWLLGTTPIEAQIKDLAEWLLDVHRDSTGLSTDSLADAGYP 511
Query: 481 KAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 540
AA LGDAVCGMA A IT RDFLFWFRSHTAKEIKWGGAKH PED+DDG++MHPRSSFKA
Sbjct: 512 GAAALGDAVCGMAAAKITTRDFLFWFRSHTAKEIKWGGAKHDPEDRDDGRKMHPRSSFKA 571
Query: 541 FLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSS 600
FLEVVK RSLPW++ EMDAIHSLQLILR SF+D + S++K +++A+L DL+L G+DELS+
Sbjct: 572 FLEVVKRRSLPWEDMEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHGMDELST 631
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
VA EMVRLIETATAPIFAVD G +NGWNAKVAELTGL+VEEAM +SLV D+V E
Sbjct: 632 VANEMVRLIETATAPIFAVDAGGFINGWNAKVAELTGLTVEEAMSRSLVRDVVVNASMET 691
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVT 720
+ +L AL+G+E++NVEIKL+T+G + K V ++VNACSS+D+T+N+VGVCFVGQDVT
Sbjct: 692 AERVLDLALQGQEEQNVEIKLKTYGDQAIKGPVILIVNACSSRDFTDNVVGVCFVGQDVT 751
Query: 721 DQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGK 780
QK+VMDKF IQGDYK IV +PNPLIPPIF +DE CSEWN AMEK +GW R D+IGK
Sbjct: 752 GQKVVMDKFTRIQGDYKTIVQNPNPLIPPIFGADEFGYCSEWNPAMEKFSGWKREDVIGK 811
Query: 781 MLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
ML+GEVFGS CC+L+G D++TKFMI L+ A GG+D+++FPF FDR GKY +ALL AN
Sbjct: 812 MLIGEVFGSDLACCKLRGQDSMTKFMIILNAAMGGRDSDRFPFGFFDRYGKYAEALLIAN 871
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
KR + +G I G FCFL ASPELQQAL VQ++ + RLKE+AY+ QEI+NPL G+ F
Sbjct: 872 KRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTALDRLKEVAYMKQEIRNPLYGIVF 931
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
T LL+ T+LT++QKQ++ETS+ CEKQ+ I+ + + E ++ G+++ + EF +G+V++A
Sbjct: 932 TRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNFEKLDQGNVDLDTLEFTMGTVMDA 991
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
V+SQ M+ RE+ LQLIR+ EIK ++GDQ R+QQVLADFL +R++ S++GWV I
Sbjct: 992 VISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYRLQQVLADFLTTAIRFTSSSDGWVGI 1051
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKL 1077
V PT+K +G IVH EFR+ PG G+P +LVQ M+ S+ +TQEG+GLS+ RK++KL
Sbjct: 1052 KVVPTIKNMKDGLHIVHFEFRVSHPGSGIPEDLVQQMYDRSQEITQEGMGLSVSRKLVKL 1111
Query: 1078 MNGEVQYIRESERCYFLIIFELPM 1101
MNG+V+Y RE+ CYFL+ ELP+
Sbjct: 1112 MNGDVKYTREAGVCYFLVTVELPL 1135
>gi|548512|sp|P36505.1|PHY1_PHYPA RecName: Full=Phytochrome 1
gi|402606|emb|CAA52933.1| phytochrome [Physcomitrella patens]
Length = 1132
Score = 1424 bits (3685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/1101 (62%), Positives = 842/1101 (76%), Gaps = 31/1101 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV-RTMSHSVPEQQISAYLSKIQRGGHIQ 97
S +AQ T DA L AVFE+SG+SG SFDYS+SV ++ + S+P ++AYL ++QRGG Q
Sbjct: 20 SVRVAQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAESLPSGAVTAYLQRMQRGGLTQ 79
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
FGC IAV+ FRVIAYSENA E+L L PQ+VP++ + + L IGTDVRTLFT+SS L
Sbjct: 80 SFGCMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASL 139
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
EKA A+E++LLNPI ++ + +GK YAI HR+D+GIVID E +T+D +S AGA+QS
Sbjct: 140 EKAAEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSH 199
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQ+LPGG+I LLCDTVVE VR+LTGYDRVM YRFHEDEHGEVVAE +R DL
Sbjct: 200 KLAAKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADL 259
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYP TDIPQASRFLF +N+VR+I DC A P+ VIQD L QP+ L GSTLR+PH
Sbjct: 260 EPYLGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPH 319
Query: 338 GCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-LWA------------------- 377
GCHAQYM NMGSIASL +AVIIN N+E++ G R LW
Sbjct: 320 GCHAQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSA 379
Query: 378 -------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
FGLQLNME++ A+QL EKH+LRTQTLLCDMLLRD+P GIV+Q P+IMDLVKCD
Sbjct: 380 CGFLMQVFGLQLNMEVESAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCD 439
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYY ++ LG TPTE+QIKDI EWLL YH DSTGLSTDSLADA YP A LGDAVC
Sbjct: 440 GAALYYGKPFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVC 499
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMA A IT +DFLFWFRSHTAKEIKWGGAKH P + DG++MHPRSSFKAFLEVVK RSL
Sbjct: 500 GMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPGENHDGRKMHPRSSFKAFLEVVKRRSL 559
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW++ EMDAIHSLQLILR SF+D S++K +++A+L DL+L +DELS VA EMVRLIE
Sbjct: 560 PWEDVEMDAIHSLQLILRGSFQDIADSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIE 619
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
TATAPI AVD +G +NGWNAK+A++TGL V EA G+SLV DLV E +V+ LL+ AL+
Sbjct: 620 TATAPILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLALR 679
Query: 671 GEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFI 730
GEE++NVEIKL+TFG + K V ++V+ACSS + N+VGVCFVGQDVT QK+ MDKF
Sbjct: 680 GEEEQNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVTGQKMFMDKFT 739
Query: 731 HIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG-- 788
IQGDYK IV +P+PLIPPIF +DE C EWN AME LTGW + +++GK+LVGE+FG
Sbjct: 740 RIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQ 799
Query: 789 -SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIV 847
CCR+K DA+TKFMIAL+ A GQ T+KF F FDR GKYV LL+ NKR N +G I
Sbjct: 800 MMCCRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVIT 859
Query: 848 GAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDL 907
G FCFLQIAS ELQQAL VQR EK A+LKELAYI +EIKNPL G++FT LLE TDL
Sbjct: 860 GVFCFLQIASSELQQALKVQRATEKVAVAKLKELAYIVREIKNPLCGLTFTRQLLEDTDL 919
Query: 908 TEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLR 967
++DQ+Q L+TSA CE+Q+ K + D+DLESIEDG LE + AEF +G+V+NAV+SQ M R
Sbjct: 920 SDDQQQFLDTSAVCEQQLQKSLNDMDLESIEDGYLELDTAEFEMGTVMNAVISQGMTTSR 979
Query: 968 ERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSS 1027
E+ LQ+ R+ P EI T+ + GDQ R+QQVL+DFLLN VR++PS EGWV+I V PT K+
Sbjct: 980 EKGLQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEGWVKIKVVPTRKRLG 1039
Query: 1028 EGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRE 1087
+VH EFR+ PG GLP ELV +M+ + MTQEGLGL+MCRK+++LMNG+V Y+RE
Sbjct: 1040 GSVHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDVHYVRE 1099
Query: 1088 SERCYFLIIFELPMPRRGSKS 1108
+ +CYF++ ELPM +R S
Sbjct: 1100 AMQCYFVVNVELPMAQRDDAS 1120
>gi|168027033|ref|XP_001766035.1| phytochrome 3 [Physcomitrella patens subsp. patens]
gi|162682678|gb|EDQ69094.1| phytochrome 3 [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1422 bits (3680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/1098 (62%), Positives = 849/1098 (77%), Gaps = 33/1098 (3%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV-RTMSHSVPEQQISAYLSKIQRGGHIQ 97
S +AQ T DA LHAVFE+SG SG +FDYS+SV ++ + S+ ++AYL ++QRGG Q
Sbjct: 20 SVRVAQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGSLHTGAVTAYLQRMQRGGLTQ 79
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
FGC +AV+E FRVIAYSENA E L L PQ+VPN+ + L IGTDVRTLFT SS+ L
Sbjct: 80 SFGCMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASL 139
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
EKA +EI+LLNPI ++ ++ KP YAI HR+D+GIVID E D +S GA+QS
Sbjct: 140 EKAAETQEISLLNPITVYCRSK-KPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSH 198
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQ+LPGGDI LLCDTVVE VR+LTGYDRVM Y+FHEDEHGEVVAE +R DL
Sbjct: 199 KLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDL 258
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +NRVRMI DC A P+ ++QD L QP+ L GSTLR+PH
Sbjct: 259 EPYLGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPVKIVQDPNLRQPVSLAGSTLRSPH 318
Query: 338 GCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-LWA------------------- 377
GCHAQYM NMGSI+S+ +AVIIN N++++ G R LW
Sbjct: 319 GCHAQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKLWGLVVCHHTSPRTVPFPLRSA 378
Query: 378 -------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
FGLQLNME++LA+QL EKH+LRTQTLLCDMLLRD+P GIV+Q P+IMDLVKCD
Sbjct: 379 CEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQVPNIMDLVKCD 438
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYY +++ LG TPTE+QIKDI EWLL YH DSTGLSTDSLADA YP A LGDAVC
Sbjct: 439 GAALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVC 498
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMA A IT +DFLFWFRSHTAKEIKWGGAKH P +KDD ++MHPRSSFKAFLEVVK RSL
Sbjct: 499 GMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSSFKAFLEVVKRRSL 558
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW++ EMDAIHSLQLILR SF+D + S++K +++A+L DL+L +DELS VA EMVRLIE
Sbjct: 559 PWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIE 618
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
TATAPI AVD +G +NGWNAK+A+ TGL V EAMG+SLV DLV E E+V+ LL+ AL+
Sbjct: 619 TATAPILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLALR 678
Query: 671 G-EEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKF 729
G EE++ VEIKL+TFGA+ K AV ++VNAC+S+D + N+VGVCFVGQDVT QK+ MDKF
Sbjct: 679 GSEEEQGVEIKLKTFGAQTVKGAVILIVNACASRDVSENVVGVCFVGQDVTGQKMFMDKF 738
Query: 730 IHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG- 788
IQGDYK IV +P+PLIPPIF +DE C EWN AME LTGW R ++IGK+LVGE+FG
Sbjct: 739 TRIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGKLLVGEIFGM 798
Query: 789 --SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQI 846
CC++K DA+TKFMI+L++A GQ+T+KF FDR G+YV ALL+ NKR N +G I
Sbjct: 799 QKMCCQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTNKRTNADGAI 858
Query: 847 VGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATD 906
G CFLQIAS ELQQAL VQ+ EK A+LKELAYI QEIKNPL G++FT LLE TD
Sbjct: 859 TGVICFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITFTRQLLEDTD 918
Query: 907 LTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLL 966
L+ DQKQ L+TSA CE+Q+ K++ D+DLESIEDG LE + AEF + +V++AV+SQ M +
Sbjct: 919 LSNDQKQFLDTSAVCEQQLQKVLNDLDLESIEDGYLELDTAEFEMRTVMDAVISQGMTIS 978
Query: 967 RERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQS 1026
RE+ LQ+IR+ P EI T+ ++GDQ R+QQVL+DFLLN VR++PS+EGWV+I V PT K+
Sbjct: 979 REKGLQIIRETPREIITMRLFGDQVRLQQVLSDFLLNAVRFTPSSEGWVKIKVVPTRKRL 1038
Query: 1027 SEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIR 1086
+ ++H EFR+ PG GLP ELV +MF + MTQEGLGL++CRK+++LMNG+VQY+R
Sbjct: 1039 GGNEHVMHLEFRVSHPGAGLPEELVLEMFDKGKGMTQEGLGLNICRKLVRLMNGDVQYVR 1098
Query: 1087 ESERCYFLIIFELPMPRR 1104
E+ +CYF++ ELP+ ++
Sbjct: 1099 EAMQCYFVLYVELPLAQQ 1116
>gi|25986849|gb|AAM94955.1| phytochrome [Physcomitrella patens]
Length = 1122
Score = 1419 bits (3672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/1097 (62%), Positives = 846/1097 (77%), Gaps = 32/1097 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV-RTMSHSVPEQQISAYLSKIQRGGHIQ 97
S +AQ T DA LHAVFE+SG SG +FDYS+SV ++ + S+ ++AYL ++QRGG Q
Sbjct: 20 SVRVAQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGSLHTGAVTAYLQRMQRGGLTQ 79
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
FGC +AV+E FRVIAYSENA E L L PQ+VPN+ + L IGTDVRTLFT SS+ L
Sbjct: 80 SFGCMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASL 139
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
EKA +EI+LLNPI ++ ++ KP YAI HR+D+GIVID E D +S GA+QS
Sbjct: 140 EKAAETQEISLLNPITVYCRSK-KPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSH 198
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQ+LPGGDI LLCDTVVE VR+LTGYDRVM Y+FHEDEHGEVVAE +R DL
Sbjct: 199 KLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDL 258
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +NRVRMI DC A P ++QD L QP+ L GSTLR+PH
Sbjct: 259 EPYLGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPEKIVQDPNLRQPVSLAGSTLRSPH 318
Query: 338 GCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR----------------------- 374
GCHAQYM NMGSI+S+ +AVIIN N++++ G R
Sbjct: 319 GCHAQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKQWGLVVCHHTSPRTVPFPLRSA 378
Query: 375 ----LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
+ FGLQLNME++LA+QL EKH+LRTQTLLCDMLLRD+P GIV+Q P+IMDLVKCD
Sbjct: 379 CEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPTGIVSQVPNIMDLVKCD 438
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYY +++ LG TPTE+QIKDI EWLL YH DSTGLSTDSLADA YP A LGDAVC
Sbjct: 439 GAALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVC 498
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMA A IT +DFLFWFRSHTAKEIKWGGAKH P +KDD ++MHPRS FKAFLEVVK RSL
Sbjct: 499 GMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSPFKAFLEVVKRRSL 558
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW++ EMDAIHSLQLILR SF+D + S++K +++A+L DL+L +DELS VA EMVRLIE
Sbjct: 559 PWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIE 618
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
TATAPI AVD +G +NGWNAK+A+ TGL V EAMG+SLV DLV E E+V+ LL+ AL+
Sbjct: 619 TATAPILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLALR 678
Query: 671 GEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFI 730
GEE++ VEIKL+TFGA+ K AV ++VNAC+S+D + N+VGVCFVGQDVT QK+ MDKF
Sbjct: 679 GEEEQGVEIKLKTFGAQTVKGAVTLIVNACASRDVSENVVGVCFVGQDVTGQKMFMDKFT 738
Query: 731 HIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG-- 788
IQGDYK IV +P+PLIPPIF +DE C EWN AME LTGW R ++IGK+LVGE+FG
Sbjct: 739 RIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGKLLVGEIFGMQ 798
Query: 789 -SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIV 847
CC++K DA+TKFMI+L++A GQ+T+KF FDR G+YV ALL+ NKR N +G I
Sbjct: 799 KMCCQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTNKRTNADGAIT 858
Query: 848 GAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDL 907
G CFLQIAS ELQQAL VQ+ EK A+LKELAYI QEIKNPL G++FT LLE TDL
Sbjct: 859 GVICFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITFTRQLLEDTDL 918
Query: 908 TEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLR 967
+ DQKQ L+TSA CE+Q+ K++ D+DLESIEDG LE + AEF + +V++AV+SQ M + R
Sbjct: 919 SNDQKQFLDTSAVCEQQLQKVLNDLDLESIEDGYLELDTAEFEMRTVMDAVISQGMTISR 978
Query: 968 ERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSS 1027
E+ LQ+IR+ P EI T+ ++GDQ R+QQVL+DFLLN VR++PS+EGWV+I V PT K+
Sbjct: 979 EKGLQIIRETPREIITMRLFGDQVRLQQVLSDFLLNAVRFTPSSEGWVKIKVVPTRKRLG 1038
Query: 1028 EGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRE 1087
+ ++H EFR+ PG GLP ELV +MF + MTQEGLGL++CRK+++LMNG+VQY+RE
Sbjct: 1039 GNEHVMHLEFRVSHPGAGLPEELVLEMFDKGKGMTQEGLGLNICRKLVRLMNGDVQYVRE 1098
Query: 1088 SERCYFLIIFELPMPRR 1104
+ +CYF++ ELP+ ++
Sbjct: 1099 AMQCYFVLYVELPLAQQ 1115
>gi|356532946|ref|XP_003535030.1| PREDICTED: phytochrome E-like [Glycine max]
Length = 1120
Score = 1404 bits (3634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 667/1087 (61%), Positives = 833/1087 (76%), Gaps = 39/1087 (3%)
Query: 40 KAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPF 99
K +AQY+ DA + A FEQSG SGKSFDYS+ V V EQ+++AYLSKIQRGG IQPF
Sbjct: 28 KILAQYSADAEILAEFEQSGVSGKSFDYSRMVLDPPRLVSEQKMTAYLSKIQRGGLIQPF 87
Query: 100 GCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEK 159
GC +A++E+TFR+I +S+N ++LGL Q KQ + IG D TLFT S L K
Sbjct: 88 GCMLAIEESTFRIIGFSDNCFQLLGLERQID---SKQFMGLIGVDATTLFTPPSGASLAK 144
Query: 160 AFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKL 219
A +REI+LLNPIW++++ T KPFYAILHR+DVG+VIDLEPAR DPALS+AGAVQSQKL
Sbjct: 145 AAASREISLLNPIWVYARTTQKPFYAILHRIDVGVVIDLEPARMSDPALSLAGAVQSQKL 204
Query: 220 AVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEP 279
AVRAIS+LQSLPG DI LLCDTVVE V++LTGYDRVMVY+FHED+HGEVV+E +R DLEP
Sbjct: 205 AVRAISRLQSLPGEDIGLLCDTVVEEVQKLTGYDRVMVYKFHEDDHGEVVSEIRRSDLEP 264
Query: 280 YFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGC 339
Y GLHYPATDIPQASRFLFKQNRVRMI DCHA P+ VIQ E L QPLCLV STLR PHGC
Sbjct: 265 YLGLHYPATDIPQASRFLFKQNRVRMICDCHAKPVKVIQSEELRQPLCLVNSTLRLPHGC 324
Query: 340 HAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW----------------------- 376
H QYMANMGSIASL +A+++NG + TRLW
Sbjct: 325 HTQYMANMGSIASLVMAIVVNG--------KHATRLWGLLVCHHTSPRYVSFPVRYACEF 376
Query: 377 ---AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA 433
AFGLQL ME+QLASQ++EK +L+TQTLLCDMLLRD+P GIV QSPSIMDLVKCDGAA
Sbjct: 377 LMQAFGLQLYMEIQLASQMAEKRILKTQTLLCDMLLRDAPLGIVNQSPSIMDLVKCDGAA 436
Query: 434 LYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMA 493
LYY+G + LG TPTE Q+KDI EWLL+ HGDSTGL+TDSLADAGYP AA+LGDAVCGMA
Sbjct: 437 LYYEGNCWLLGTTPTEAQVKDIAEWLLSNHGDSTGLTTDSLADAGYPGAASLGDAVCGMA 496
Query: 494 VAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWD 553
A I + FLFWFRSHTAKE+KWGGAKHHPEDKDDG +M+PRSSFKAFLEVVKS+SLPW+
Sbjct: 497 TARINSKHFLFWFRSHTAKEVKWGGAKHHPEDKDDGGKMNPRSSFKAFLEVVKSKSLPWE 556
Query: 554 NAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETAT 613
E++AIHSLQLI+RDSF+D E + K + Q D G+DELSSVA EMVRLIETAT
Sbjct: 557 VPEINAIHSLQLIIRDSFQDTENTGPKTLTYVQKSDTATGGMDELSSVALEMVRLIETAT 616
Query: 614 APIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEE 673
PIF VD+ G +NGWN K+AELTGL EAMGKSLV+++++ + + + L AL+G+E
Sbjct: 617 VPIFGVDLGGVINGWNTKIAELTGLQASEAMGKSLVNEIIHADSCDTFKSTLSRALQGQE 676
Query: 674 DKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQ 733
DKNVE+K++ FG + +++ ++VVNAC+S+D+T+ IVGVCFVGQD+T +K+V DKFI ++
Sbjct: 677 DKNVELKIKHFGLDQQQEVAYLVVNACTSRDHTDAIVGVCFVGQDITCEKVVQDKFIQLE 736
Query: 734 GDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRL 793
GDYKAI+ S +PLIPPIF+SDEN CCSEWN AME+LTGW R ++IGK+L GE+FGS CRL
Sbjct: 737 GDYKAIIQSLSPLIPPIFSSDENACCSEWNAAMERLTGWKRDEVIGKLLPGEIFGSFCRL 796
Query: 794 KGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFL 853
KG D LT FMI L+ GQD+EK PF FDRNG++++ +TANKR++ G ++G FCFL
Sbjct: 797 KGQDTLTNFMILLYRGISGQDSEKIPFGFFDRNGEFIETYITANKRIDTGGNMLGCFCFL 856
Query: 854 QIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQ 913
QI P+L Q + + ++ + KELAYI QE+K PL+G+ FT LLE T ++E+QKQ
Sbjct: 857 QIVMPDLNQPSEEHKPRGRESISESKELAYILQEMKKPLNGIRFTRKLLENTAVSENQKQ 916
Query: 914 LLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQL 973
L+TS ACE+Q+L II+D +L SI +G+L+ EF+LG++++A+VSQVMML+RE+NLQL
Sbjct: 917 FLDTSDACERQILAIIEDTNLGSINEGTLQLNMEEFVLGNILDAIVSQVMMLIREKNLQL 976
Query: 974 IRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIV 1033
+IP+EIK L++YGDQ R+Q VL+DFLLN+V ++ S GWVEI + P L +G +
Sbjct: 977 FHEIPDEIKMLSLYGDQIRLQVVLSDFLLNVVSHTASPNGWVEIKISPGLTL-QDGNEFI 1035
Query: 1034 HNEFRMVCPGEGLPPELVQDMFH-SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCY 1092
H +F M G+G+P ++ DMF ++W TQEGLGL M RKIL ++G VQY+RE +CY
Sbjct: 1036 HLKFSMAHSGQGIPSNVLHDMFEGGNQWTTQEGLGLYMSRKILSRISGHVQYVREQNKCY 1095
Query: 1093 FLIIFEL 1099
FLI E+
Sbjct: 1096 FLIDLEI 1102
>gi|1730566|sp|P55004.1|PHYE_IPONI RecName: Full=Phytochrome E
gi|1145714|gb|AAA84970.1| phytochrome E [Ipomoea nil]
Length = 1115
Score = 1376 bits (3562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/1101 (60%), Positives = 836/1101 (75%), Gaps = 25/1101 (2%)
Query: 31 NATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKI 90
+AT ++ KAIAQY DA+L A FEQS ESGKSFDYS+SV +V E++++AYLS+I
Sbjct: 13 SATSNLNTGKAIAQYNADAKLMAEFEQSRESGKSFDYSRSVIHAPQNVTEEEMTAYLSRI 72
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRGG IQPFGC +A++E +F+++ +SEN ++LGL P + + IG D RTLFT
Sbjct: 73 QRGGLIQPFGCMLAIEEPSFKIVGFSENCFDLLGLKSGVEP---PERMSLIGIDARTLFT 129
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSI 210
SS L KA +REI+LLNPIW+HSK KPFYA+LHR+DVGIVIDLEPA + DPAL +
Sbjct: 130 LSSRASLAKAVASREISLLNPIWVHSKINQKPFYAVLHRIDVGIVIDLEPANSADPALLL 189
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYDRVMVY+FH+D HGEVV+
Sbjct: 190 AGAVQSQKLAVRAISRLQSLPGGDIGTLCDTVVEDVQKLTGYDRVMVYKFHDDSHGEVVS 249
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+A P+ V+Q E L QPLCLV
Sbjct: 250 EIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVLQCEELKQPLCLVN 309
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR----------- 374
STLR+PHGCH +YMANMGSIASL +AV+IN ++ + G ++ R
Sbjct: 310 STLRSPHGCHTKYMANMGSIASLVMAVVINSSESMKLWGLVVCHHTSPRYVPFPLRYACE 369
Query: 375 --LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGA 432
+ AF LQL MELQLASQL+EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+CDGA
Sbjct: 370 FLMQAFSLQLYMELQLASQLAEKKILQTQTLLCDMLLRDAPFGIVTQTPSIMDLVRCDGA 429
Query: 433 ALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGM 492
ALYY GK + LGVTPTETQ+KDI EWLL HGDSTGLSTD L+DAGYP A LGDAV GM
Sbjct: 430 ALYYNGKCWLLGVTPTETQVKDIAEWLLHNHGDSTGLSTDCLSDAGYPGAPLLGDAVSGM 489
Query: 493 AVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 552
A A IT +DFLFWFRSHTAKE+KWGGAKHHPEDKDDG RMHPRSSF AFLEVVKSRSLPW
Sbjct: 490 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFIAFLEVVKSRSLPW 549
Query: 553 DNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETA 612
+++E++AIHSLQLI+RDS + + K+V + Q D + ELSS+A E+VRL+ETA
Sbjct: 550 EDSEINAIHSLQLIMRDSLQGIGENYMKSVSSPQQNDSDGVRFYELSSMALELVRLVETA 609
Query: 613 TAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGE 672
T PIF VD G +NGWNAK+AELTGL A+GK L+ D+ +++ E L+ AL+GE
Sbjct: 610 TVPIFGVDSSGLINGWNAKIAELTGLQANVAIGKYLIDDVTHEDSHETFKALMCRALQGE 669
Query: 673 EDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHI 732
ED+NVE+KL FG K+ V++VVNAC+S+DY N+I+GVCFVGQD+T +K VMDKF+ +
Sbjct: 670 EDRNVEVKLLKFGNHPTKEVVYLVVNACTSRDYKNDIIGVCFVGQDITPEKAVMDKFVRL 729
Query: 733 QGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCR 792
QGDY+AI+ S NPLIPPIFASDEN CCSEWN AME+LTG + ++IGK L GE+FG CR
Sbjct: 730 QGDYEAIIQSLNPLIPPIFASDENACCSEWNAAMERLTGLVKCEVIGKRLPGEIFGGLCR 789
Query: 793 LKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCF 852
LKG DALTKFMI L+ G DTEK F FDR G ++ +TANKR + G I+G FCF
Sbjct: 790 LKGQDALTKFMILLYQGISGHDTEKLSFGFFDRKGNFIDVFITANKRTDERGNIIGCFCF 849
Query: 853 LQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQK 912
LQ + + Q + +++C + LKE AYI Q++KNPL+G+ FT+ LLE T ++ QK
Sbjct: 850 LQTMAVDHPQISARDIEDDRECLSTLKEFAYIQQQMKNPLNGIRFTHKLLEGTVTSDHQK 909
Query: 913 QLLETSAACEKQMLKIIKDVDLESIEDGS-LEFEKAEFLLGSVINAVVSQVMMLLRERNL 971
Q LETS ACEKQ+L II+++D I DG+ +E + EF++G+VI+AVVSQVM+ L+E+NL
Sbjct: 910 QFLETSEACEKQILSIIENMDSGGIVDGNRVELKTEEFVIGNVIDAVVSQVMIPLKEKNL 969
Query: 972 QLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQT 1031
QL+ DIP++IK+L +YGDQ ++Q VL+DFLL++VR++PS +GWVEI V P LK +G
Sbjct: 970 QLLHDIPDQIKSLPIYGDQIKLQLVLSDFLLSIVRHAPSPDGWVEIRVSPGLKLIQDGNV 1029
Query: 1032 IVHNEFRMVCPGEGLPPELVQDMFH-SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESER 1090
+H +FRM PG+GLP L++DM +RW TQEG+ L + +K++++MNG V Y+RE ++
Sbjct: 1030 FIHIQFRMTHPGQGLPSALIEDMVRGGTRWTTQEGVVLHLSQKLVRMMNGHVHYVREQQK 1089
Query: 1091 CYFLI--IFELPMPRRGSKSI 1109
CYFLI F+ PR S+
Sbjct: 1090 CYFLIDLDFKTQKPRSRESSM 1110
>gi|356556523|ref|XP_003546574.1| PREDICTED: phytochrome E-like [Glycine max]
Length = 1121
Score = 1376 bits (3561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 659/1080 (61%), Positives = 827/1080 (76%), Gaps = 24/1080 (2%)
Query: 40 KAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPF 99
K +AQY+ DA + A FE SG SGKSFDYS+ V S V EQ+++AYLSKIQRGG IQPF
Sbjct: 28 KILAQYSADAEILAEFELSGVSGKSFDYSRMVLDPSRLVSEQKMTAYLSKIQRGGLIQPF 87
Query: 100 GCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEK 159
GC +A++E+TFR+I YS+N ++LGL Q KQ + IG D TLFT S L K
Sbjct: 88 GCMLAIEESTFRIIGYSDNCFQLLGLERQID---SKQFMNLIGVDATTLFTPPSGASLAK 144
Query: 160 AFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKL 219
A +REI+LLNPIW++++ T KPFYAILHR+DVG+VIDLEPAR DP LS+AGAVQSQKL
Sbjct: 145 AAASREISLLNPIWVYARTTQKPFYAILHRIDVGVVIDLEPARMSDPTLSLAGAVQSQKL 204
Query: 220 AVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEP 279
AVRAIS+LQSLPG DI LLCDTVVE V++LTGYDRVMVY+FHED+HGEVV+E +R DLEP
Sbjct: 205 AVRAISRLQSLPGEDIGLLCDTVVEEVQKLTGYDRVMVYKFHEDDHGEVVSEIRRSDLEP 264
Query: 280 YFGLHYPATDIPQASRFLFKQNRVRMIV-DCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
Y GLHYPATDIPQASRFLFKQNRVRM++ DCHA P+ VIQ E L QPLCLV STLR PHG
Sbjct: 265 YLGLHYPATDIPQASRFLFKQNRVRMMICDCHAKPVKVIQSEELRQPLCLVNSTLRLPHG 324
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG---------RSTTRL---------WAFGL 380
CH QYMANMGSIASL +A+I+NG D + G RS + L FGL
Sbjct: 325 CHTQYMANMGSIASLVMAIIVNGKDATRLWGLLVCHHTSPRSVSFLVRYACEFLMQTFGL 384
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL ME+QLASQ++EK +L+TQTLLCDMLLRD+P GIV QSPSIMDLVKCDGAALYY+G
Sbjct: 385 QLYMEIQLASQMAEKRILKTQTLLCDMLLRDAPFGIVNQSPSIMDLVKCDGAALYYEGNC 444
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LG TPTE Q+KDI EWLL+ HGDSTGL+TDSLADAGYP AA+LGDAVCGMA A I +
Sbjct: 445 WLLGTTPTEAQVKDIAEWLLSNHGDSTGLTTDSLADAGYPGAASLGDAVCGMATARINSK 504
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
FLFWFRSHTAKE+KWGGAKHHPEDKDDG +M+PRSSFKAFLEVVKS+SLPW+ E++AI
Sbjct: 505 HFLFWFRSHTAKEVKWGGAKHHPEDKDDGGKMNPRSSFKAFLEVVKSKSLPWEVLEINAI 564
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDSF+D E + K + Q D G+DELSSVA +MVRLIETAT PIF VD
Sbjct: 565 HSLQLIIRDSFQDTENTGPKTLSYVQKSDTAAGGMDELSSVALQMVRLIETATVPIFGVD 624
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIK 680
+ G +NGWN K+AELTGL EAMGKSLV+++++ + + N L AL+G+EDKNVE+K
Sbjct: 625 LGGVINGWNTKIAELTGLQASEAMGKSLVNEIIHADSGDTFKNTLSRALQGQEDKNVELK 684
Query: 681 LRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIV 740
++ FG + +++ ++VNAC S+DYT+ IVGVCFVG+D+T +K+V DKFI ++GDYKAI+
Sbjct: 685 IKHFGLDQQQEVACLMVNACISRDYTDAIVGVCFVGEDITYEKVVQDKFIKLEGDYKAII 744
Query: 741 HSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALT 800
S +PLIPPIF+SDEN CCSEWN AME+LTGW R ++IGK+L GE+FGS CRLKG D LT
Sbjct: 745 QSLSPLIPPIFSSDENVCCSEWNAAMERLTGWKRDEVIGKLLPGEIFGSFCRLKGQDTLT 804
Query: 801 KFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPEL 860
FMI L+ QD+EK PF F RNG++++ +TANK+++ G ++G FCFLQI P+L
Sbjct: 805 NFMILLYRGISRQDSEKLPFGFFHRNGEFIETYITANKKIDAGGNMLGCFCFLQIVMPDL 864
Query: 861 QQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAA 920
Q + ++ + +E AYI QE+K PL+G+ FT LLE T ++E+QKQ L+TS A
Sbjct: 865 NQPSEEHNPRGRESISESEE-AYILQEMKKPLNGIRFTRKLLENTTVSENQKQFLDTSDA 923
Query: 921 CEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEE 980
CE+Q++ II+D L SI + +L+ EF+LG++++A+VSQVMML+RE+NLQL +IP+E
Sbjct: 924 CERQIMAIIEDTHLGSINEDTLQLNVEEFVLGNILDAIVSQVMMLIREKNLQLFHEIPDE 983
Query: 981 IKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMV 1040
IK L++YGDQ R+Q VL+DFLLN+V ++ S GWVEI V PTLK +G +H +FR+
Sbjct: 984 IKMLSLYGDQIRLQVVLSDFLLNVVSHTASPNGWVEIKVSPTLKIIQDGDEFIHLQFRIA 1043
Query: 1041 CPGEGLPPELVQDMFH-SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
G+G+P ++ +M ++W TQEGLGL M RKIL+ M+G V+Y R + CYFLI E+
Sbjct: 1044 HSGQGIPSNVIHEMVEGGNQWTTQEGLGLYMSRKILRRMSGHVRYQRGQDMCYFLIDLEI 1103
>gi|6708129|gb|AAF25812.1|AF178571_1 phytochrome E [Solanum lycopersicum]
Length = 1137
Score = 1372 bits (3552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/1099 (59%), Positives = 833/1099 (75%), Gaps = 34/1099 (3%)
Query: 20 SSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVP 79
SS SN++ +NA+++ A+AQY DA+L A FEQS SGKSFDYS+SV H
Sbjct: 34 SSAASNMK--NNASKA-----ALAQYNADAKLMAEFEQSSVSGKSFDYSKSVLFPPHEAN 86
Query: 80 EQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEIL 139
E++I++YLS+IQRGG +QPFGC +A++E TF++I YSEN +MLG P K ++
Sbjct: 87 EEEITSYLSRIQRGGLVQPFGCMVAIEEPTFKIIGYSENCYDMLGFKPT------KMKLG 140
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
IG D R LFT SS L K +REI+LLNPIW+HS+ T KPFYAILHR+DVGIVIDLE
Sbjct: 141 LIGVDARNLFTPSSGDSLAKVMASREISLLNPIWVHSRTTHKPFYAILHRIDVGIVIDLE 200
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
PA + DPAL +AGAVQSQKLAVR+IS+LQSLPGGDI +LCDT VE V++LTGYDRVMVY+
Sbjct: 201 PANSSDPALLLAGAVQSQKLAVRSISRLQSLPGGDIGVLCDTAVEDVQKLTGYDRVMVYK 260
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FH+D HGE+V+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+A P+ V+Q
Sbjct: 261 FHDDNHGEIVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVVQS 320
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG---------- 369
E L QP+CLV STLR+PH CH++YMANMGSI+SL +A++IN D + G
Sbjct: 321 EELKQPICLVNSTLRSPHECHSKYMANMGSISSLVMAILINSGDSMKLWGLIVCHHTSPR 380
Query: 370 ------RSTTRLW--AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSP 421
R + AFGLQLNMELQLASQL+EK L+ QTLLCDMLLRD P G+VTQSP
Sbjct: 381 YVPFPLRYACEFFTQAFGLQLNMELQLASQLAEKKTLQMQTLLCDMLLRDVPFGVVTQSP 440
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
SIMDLVKCDGAALY GK + LGVTPTE Q+KDI +WLL H DSTGLSTD LADAGYP
Sbjct: 441 SIMDLVKCDGAALYCGGKCWLLGVTPTEAQVKDIAQWLLVAHKDSTGLSTDCLADAGYPG 500
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
AA LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG +MHPRSSF AF
Sbjct: 501 AALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKDDGGKMHPRSSFNAF 560
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVKSRSLPW+ E++AIHSLQ+I+R+S ++ E S+ K + +Q D + +DELSSV
Sbjct: 561 LEVVKSRSLPWEIPEINAIHSLQIIMRESIQENENSSLKTLTTSQQNDADGPSMDELSSV 620
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
A EMVRLIETATAPIF VD G +NGWN K+A+LTGL EA+G SL++D+ +++ V
Sbjct: 621 AMEMVRLIETATAPIFGVDPSGLINGWNEKIADLTGLHASEAVGMSLINDITHEDSRGTV 680
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+ +LH AL GEE+KNVEIKLR FG + +++V+NAC+S+D+ N +VGV FV QDVT
Sbjct: 681 EKVLHRALLGEEEKNVEIKLRRFGKDPPGSVIYLVINACTSRDHKNGVVGVSFVAQDVTP 740
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
+K +MDKFI ++GDY+AIV S +PLIPPIFASDEN CCSEWN AME+LTGW++ +++G+
Sbjct: 741 EKFIMDKFIQLRGDYEAIVQSLSPLIPPIFASDENACCSEWNAAMERLTGWTKYEVMGRT 800
Query: 782 LVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVN 841
L GEVFG CRL G DALTKFMI + A G DT+K PF F+R G++++ LTANKR +
Sbjct: 801 LPGEVFGGLCRLTGQDALTKFMILFYQAISGHDTKKLPFGFFNRRGEFLEVFLTANKRTD 860
Query: 842 MEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSL 901
G + G FCFLQ + + + +RQ K + KE Y+ Q++KNPL+G+ FT+ L
Sbjct: 861 EHGNVCGCFCFLQPMT--IDPEASDERQDSKDSLWKYKEYVYVLQQMKNPLNGIQFTHKL 918
Query: 902 LEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQ 961
LEAT ++++QKQLLETS ACEKQ+L +I ++D IEDG ++ EF+LG+V++A+VSQ
Sbjct: 919 LEATGVSDNQKQLLETSEACEKQILSVIDNMDFGGIEDGKVQLNMEEFVLGNVVDAIVSQ 978
Query: 962 VMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRP 1021
VM+ L+E+NLQL+ DIP++IKTL +YGDQ ++Q+VL+DFLL++V ++PS +GWVEI V P
Sbjct: 979 VMIFLKEKNLQLLHDIPDQIKTLPLYGDQIKLQRVLSDFLLSVVHHAPSPDGWVEIKVLP 1038
Query: 1022 TLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCRKILKLMNG 1080
LK +G ++H + RM PG+GLP L+ DM +RW TQEG+ L++ +K+L +MNG
Sbjct: 1039 GLKLIQDGNELIHLQLRMTHPGQGLPAALIDDMSGERNRWTTQEGIALNVAQKLLNVMNG 1098
Query: 1081 EVQYIRESERCYFLIIFEL 1099
V+Y+R ++CYFLI EL
Sbjct: 1099 HVRYVRGEDKCYFLIDVEL 1117
>gi|1125699|gb|AAC49128.1| phytochrome [Mesotaenium caldariorum]
gi|1587953|prf||2207374B phytochrome photoreceptor
Length = 1142
Score = 1370 bits (3545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/1138 (58%), Positives = 837/1138 (73%), Gaps = 60/1138 (5%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV----RT 73
+QSSG S + +AQ T DA+L+ FE S G SFDY++SV
Sbjct: 7 SQSSGESTAKTKREVR--------VAQATADAKLNTAFEASAAVGGSFDYTKSVGASLNA 58
Query: 74 MSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNL 133
S ++P ++AYL ++QRGG Q FGC + V+E +FRV A+SENAGEML L PQ+VP++
Sbjct: 59 GSEAIPSSAVTAYLQRMQRGGITQTFGCMLMVEEGSFRVRAFSENAGEMLDLVPQAVPSM 118
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+Q ++ +GTD+RTLFTS+S LLEKA A +++++NP+ + S+ KPF+A+LHR+DVG
Sbjct: 119 GQQSLIAVGTDIRTLFTSASVSLLEKAAMATDVSVMNPVSLQSRAAKKPFFAVLHRIDVG 178
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
+V+DLEP R DP +S AGA+QS KLA +AIS+LQSLPGGDI LLCD VVE VR+LTGYD
Sbjct: 179 LVVDLEPVRPSDPNVSAAGAMQSHKLAAKAISRLQSLPGGDIGLLCDAVVEEVRELTGYD 238
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQA+RFLF +NRVR+I DC A P
Sbjct: 239 RVMAYKFHEDEHGEVIAEIRRSDLEPYLGLHYPATDIPQAARFLFMKNRVRIICDCSAPP 298
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE----AVGG 369
+ VIQD + P+ L GSTLR HGCHAQYMANMGS+ASL +AVIIN N E A GG
Sbjct: 299 VKVIQDPTMKHPISLAGSTLRGVHGCHAQYMANMGSVASLVMAVIINDNSSEEGATAAGG 358
Query: 370 --RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQ 401
+LW FGLQLNME++L+SQL EKH+LRTQ
Sbjct: 359 ILHKGRKLWGLVVCHHSSPRYVPFPLRSACEFLMQVFGLQLNMEVELSSQLREKHILRTQ 418
Query: 402 TLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLT 461
TLLCDMLLRD+P GIV+QSP+I DLVKCDGAAL+Y G+ + LGVTP+E Q++DI WLL
Sbjct: 419 TLLCDMLLRDAPMGIVSQSPNITDLVKCDGAALFYHGRAWLLGVTPSEAQVRDIAAWLLD 478
Query: 462 YHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKH 521
H DSTGLSTDSLADAGYP A +LG +VCGMA A IT +DFLFWFRSH KE+KW GAK
Sbjct: 479 SHKDSTGLSTDSLADAGYPNADSLGVSVCGMAAARITSKDFLFWFRSHAQKEVKWAGAKQ 538
Query: 522 HPEDKD-----DGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRD--- 573
P D+D +G RMHPRSSF+AFLEVVK RSLPW++ EMDAIHSLQLILR SF+D
Sbjct: 539 EPGDRDREEGEEGGRMHPRSSFQAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSFQDMEG 598
Query: 574 ---AEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNA 630
+K ++NA+L DL+LQG+DELS+VA EMVRLIETATAPI AVD GCVNGWNA
Sbjct: 599 EGGGSQQGNKRMINARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSLGCVNGWNA 658
Query: 631 KVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAE--N 688
KV+ELTGL V EAMGKSLV DLV +E E V+ +L+ AL GEE++NVEI+L+T+G + +
Sbjct: 659 KVSELTGLPVSEAMGKSLVKDLVQRESREAVERVLYMALNGEEEQNVEIQLKTWGPQLHS 718
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
V +VVNAC+S+D + ++VGVCFVGQDVT +K V+DKFI IQGDY IV S N LIP
Sbjct: 719 HGGTVILVVNACASRDVSESVVGVCFVGQDVTGEKEVLDKFIRIQGDYTTIVRSRNSLIP 778
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIF SDE CC+EWN AMEKLTG R D+IG+ML+G+VFGS RL+G D LT+FMI L+
Sbjct: 779 PIFGSDEYGCCTEWNPAMEKLTGVRREDVIGRMLMGDVFGSALRLRGSDGLTQFMIVLNR 838
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A G DT+KFPF +DR GK V +LLTANKR + +G I G FCFL S ELQQAL+VQ+
Sbjct: 839 AMDGADTDKFPFTFYDREGKCVDSLLTANKRTDADGAITGVFCFLHTVSLELQQALSVQK 898
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
E+ A+ KELAYI QEI+NPL G+ F S +E T+L+EDQKQL+ETSA CEKQ+ +I
Sbjct: 899 AAERVAEAKAKELAYIRQEIQNPLDGIHFARSFIEHTELSEDQKQLMETSATCEKQLRRI 958
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D+DLESIE+G LE E EF++ +V+N+VVSQ M+ ++ LQL D P E K++ V+G
Sbjct: 959 LDDMDLESIEEGYLELETGEFMMATVMNSVVSQGMVQSSKKGLQLFCDTPPEFKSMCVFG 1018
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
DQ R+QQVLADFL+N V+++P A GWVEI V P ++ G T+ H EFR+ GEGLP
Sbjct: 1019 DQVRLQQVLADFLMNAVQFTP-ASGWVEIKVVPNVRSLPGGITMAHMEFRVTHSGEGLPE 1077
Query: 1049 ELVQDMFH--SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
+LV MF + +QEGLGLSMCRKI++LM+GEV+Y+RE + YFL++ +LP+ +R
Sbjct: 1078 DLVHQMFDRADAHSKSQEGLGLSMCRKIVRLMSGEVRYVREPGKSYFLVLLDLPLAQR 1135
>gi|449459392|ref|XP_004147430.1| PREDICTED: phytochrome E-like [Cucumis sativus]
Length = 1134
Score = 1370 bits (3545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/1128 (58%), Positives = 847/1128 (75%), Gaps = 38/1128 (3%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSK--AIAQYTVDARLHAVFEQSGESGKSFDYSQS 70
R +A SS SN RA T + T ++ A+ QY DA L FE S SG+SF+YS+S
Sbjct: 10 RGMAAFSSSADSNTRAPPPPTTTSTDNRLAALVQYNADAGLLNKFELSDASGESFNYSRS 69
Query: 71 VRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSV 130
V SVPE+QI+AYLSKIQRGG +QPFGC +A++E++F++I++SEN E+LGL
Sbjct: 70 VLEAPVSVPEEQITAYLSKIQRGGLVQPFGCLLAIEESSFKIISFSENCFELLGLNDDQF 129
Query: 131 PNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRV 190
+ + ++ L IG D+R LFT SS L KA +REI+LLNP+W++S+ T KPFYAILHR+
Sbjct: 130 GSAQGKKGL-IGVDMRALFTPSSGASLAKAASSREISLLNPVWVYSRTTQKPFYAILHRI 188
Query: 191 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
DVGIVIDLEPAR+ DPALS+AGAVQSQKLAVRAIS+LQ+LP GDI +LCDTVVE +++LT
Sbjct: 189 DVGIVIDLEPARSVDPALSLAGAVQSQKLAVRAISRLQALPSGDIGILCDTVVEDIQKLT 248
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FH+DEHGEVV+E +R DLEPY GLHYPA DIPQA+RFLFKQNR+RMI DC+
Sbjct: 249 GYDRVMVYKFHDDEHGEVVSEIRRSDLEPYLGLHYPAIDIPQAARFLFKQNRIRMICDCN 308
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ + L QPLCLV ST+RAPH CH QYMANM +++SLA+A+++N +D
Sbjct: 309 AKPVPVIQSDDLKQPLCLVNSTIRAPHSCHLQYMANMSTLSSLAMAIVMNSDD------- 361
Query: 371 STTRLW--------------------------AFGLQLNMELQLASQLSEKHVLRTQTLL 404
S TRLW AFGLQL MELQLASQL+EK +L+TQTLL
Sbjct: 362 SPTRLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLTEKKILKTQTLL 421
Query: 405 CDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG 464
CDMLLR SP ++T+SPSIMDLVKCDGAALYY+G Y LG+TPTE Q+KD+ EW+L HG
Sbjct: 422 CDMLLRGSPCALLTRSPSIMDLVKCDGAALYYKGACYLLGITPTEAQVKDLAEWILNNHG 481
Query: 465 DSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 524
DSTGLSTDSLADAGYP+AA+LGDAVCGMA A IT +DFLFWFRSH AKEI+WGGAKHHP+
Sbjct: 482 DSTGLSTDSLADAGYPEAASLGDAVCGMATARITSKDFLFWFRSHVAKEIQWGGAKHHPD 541
Query: 525 DKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVN 584
DKDD RMHPRSSFKAFLEV KSRSL W+ E++AIHSLQLI+R+SF ++ SNSKA +
Sbjct: 542 DKDDSGRMHPRSSFKAFLEVAKSRSLSWEVQEINAIHSLQLIMRESFPNSGDSNSKAENS 601
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
QL D E+Q ++ELSSVA EMVRLIETAT PIF VD G +NGWNAK++EL GL EA+
Sbjct: 602 PQLSDAEMQDINELSSVACEMVRLIETATVPIFGVDSTGLINGWNAKISELVGLHTGEAL 661
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GKSLV+++V+++ ++LL AL+G+EDKNVE+KLR+F + V++VVNAC+S+D
Sbjct: 662 GKSLVNEIVHEDSRGTAEDLLSCALQGKEDKNVELKLRSFRTDKEHPNVYIVVNACTSRD 721
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNT 764
YTN +VGVCFVGQD+T +K VMDKFI +QGDYK I+ S +PLIPP+F SDEN C EW
Sbjct: 722 YTNKVVGVCFVGQDLTSEKGVMDKFIRLQGDYKTIIESLSPLIPPMFVSDENGYCCEWTA 781
Query: 765 AMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFD 824
AMEKLTGW + +++GKML GE+FG+ CRLKG D LT+FMI L+ GQ TEKFP F+
Sbjct: 782 AMEKLTGWRKNEVVGKMLAGEIFGNFCRLKGLDTLTRFMILLYQGISGQVTEKFPLGFFN 841
Query: 825 RNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYI 884
++G YV LLT+NKR + EG +G CFLQI P L L +++ + KEL+++
Sbjct: 842 KDGNYVDVLLTSNKRTDAEGNAIGCICFLQIVQPNLHGVLEGLGTGDREAILQHKELSFL 901
Query: 885 CQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEF 944
E+KNPL+G+ F + LL + +TE+QK L+TS ACE+Q++ II+D+D S+E G +E
Sbjct: 902 KHEVKNPLNGLRFMHELLVNSGITENQKLFLDTSDACERQIMTIIEDMDFRSLEGGQVEI 961
Query: 945 EKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNM 1004
+ +FLLGSV++A++ Q+M+++RERN+QL +IPEEIKTL + GDQ ++Q VL+DFLLN+
Sbjct: 962 NRQDFLLGSVLDAIICQIMIVVRERNIQLFHEIPEEIKTLTLCGDQIKLQMVLSDFLLNI 1021
Query: 1005 VRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSS-RWMTQ 1063
V+Y+P +GWVEI + LK +G +H + RM PG+GLP EL+QDM +W ++
Sbjct: 1022 VQYAPVLDGWVEIKISSGLKLIQDGNEHIHLQIRMSHPGQGLPHELIQDMVGGGQQWTSE 1081
Query: 1064 EGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPR-RGSKSIT 1110
+GL L++ R++L +NG V+Y+RE +CYFLI EL + R RGS T
Sbjct: 1082 QGLALNLSRRLLNKLNGNVRYVREQTKCYFLIDLELKLRRLRGSTEAT 1129
>gi|158322024|gb|ABW33491.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1345 bits (3480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/863 (74%), Positives = 735/863 (85%), Gaps = 29/863 (3%)
Query: 59 GESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSEN 118
GESGKSFDY++S+++ + SVPEQQI+AYLS+IQRGG IQPFGC +AV+E TFR+IAYSEN
Sbjct: 1 GESGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSEN 60
Query: 119 AGEMLGLAPQSVPNLEK--QEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHS 176
A EML LAPQSVP++EK Q++LTIGTDVRTLFT++S+ LEKA A+EI+L+NPIW+H
Sbjct: 61 AVEMLDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHC 120
Query: 177 KNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIK 236
KN+ KPFYAI+HR+DVG+VIDLEP RT D +S AGAVQSQKLAVRAIS+LQSLP GD+
Sbjct: 121 KNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVG 180
Query: 237 LLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRF 296
LLCDTVVE+VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRF
Sbjct: 181 LLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRF 240
Query: 297 LFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALA 356
LF QNRVRMI DC ATP+ VIQ E LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL +A
Sbjct: 241 LFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMA 300
Query: 357 VIINGNDEEAVG-GRSTTRLW--------------------------AFGLQLNMELQLA 389
VIINGND+E G GR++ +LW A GLQLNMELQLA
Sbjct: 301 VIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLA 360
Query: 390 SQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE 449
+QL+EKH+LRTQTLLCDMLLRD+P GIVTQSPSI DLVKCDGAALYY G + LGVTPTE
Sbjct: 361 AQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWLLGVTPTE 420
Query: 450 TQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSH 509
QIKDI +WLL +HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSH
Sbjct: 421 AQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSH 480
Query: 510 TAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRD 569
TAKE+KWGGAKHHP+DKDD +RMHPRSSFKAFLEVVK RSLPWDN E+DAIHSLQLILR
Sbjct: 481 TAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRG 540
Query: 570 SFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWN 629
SFRD + S +K +V+++L DL LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWN
Sbjct: 541 SFRDIDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWN 600
Query: 630 AKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR 689
AKVAELTGL V EAMG SLV DLV+++ E V+ +LH+AL+GEE+KNVE+ L+TFG +
Sbjct: 601 AKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKE 660
Query: 690 KKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPP 749
K+AV +VVNACSS+D+T+NIVGVCFVGQDVT QK+VMDKFI IQGDY++IV SPNPLIPP
Sbjct: 661 KEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPP 720
Query: 750 IFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNA 809
IFASDE CCSEWN AMEK+TGW+ ++IGKMLVGE+FG CCRLKG DA+TKF I LH+A
Sbjct: 721 IFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSA 780
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQ+ EKFPF FD+ GKYV+ALLTANKR + +G+I G+FCFLQIAS ELQ AL VQRQ
Sbjct: 781 IDGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELQHALEVQRQ 840
Query: 870 QEKKCFARLKELAYICQEIKNPL 892
QEKKCFARLKELAYI QEIKNPL
Sbjct: 841 QEKKCFARLKELAYIRQEIKNPL 863
>gi|158321996|gb|ABW33477.1| phytochrome P [Pinus sylvestris]
gi|158321998|gb|ABW33478.1| phytochrome P [Pinus sylvestris]
gi|158322000|gb|ABW33479.1| phytochrome P [Pinus sylvestris]
gi|158322002|gb|ABW33480.1| phytochrome P [Pinus sylvestris]
gi|158322004|gb|ABW33481.1| phytochrome P [Pinus sylvestris]
gi|158322006|gb|ABW33482.1| phytochrome P [Pinus sylvestris]
gi|158322008|gb|ABW33483.1| phytochrome P [Pinus sylvestris]
gi|158322010|gb|ABW33484.1| phytochrome P [Pinus sylvestris]
gi|158322012|gb|ABW33485.1| phytochrome P [Pinus sylvestris]
gi|158322014|gb|ABW33486.1| phytochrome P [Pinus sylvestris]
gi|158322016|gb|ABW33487.1| phytochrome P [Pinus sylvestris]
gi|158322020|gb|ABW33489.1| phytochrome P [Pinus sylvestris]
gi|158322022|gb|ABW33490.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1345 bits (3480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/863 (74%), Positives = 735/863 (85%), Gaps = 29/863 (3%)
Query: 59 GESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSEN 118
GESGKSFDY++S+++ + SVPEQQI+AYLS+IQRGG IQPFGC +AV+E TFR+IAYSEN
Sbjct: 1 GESGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSEN 60
Query: 119 AGEMLGLAPQSVPNLEK--QEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHS 176
A EML LAPQSVP++EK Q++LTIGTDVRTLFT++S+ LEKA A+EI+L+NPIW+H
Sbjct: 61 AVEMLDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHC 120
Query: 177 KNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIK 236
KN+ KPFYAI+HR+DVG+VIDLEP RT D +S AGAVQSQKLAVRAIS+LQSLP GD+
Sbjct: 121 KNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVG 180
Query: 237 LLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRF 296
LLCDTVVE+VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRF
Sbjct: 181 LLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRF 240
Query: 297 LFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALA 356
LF QNRVRMI DC ATP+ VIQ E LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL +A
Sbjct: 241 LFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMA 300
Query: 357 VIINGNDEEAVG-GRSTTRLW--------------------------AFGLQLNMELQLA 389
VIINGND+E G GR++ +LW A GLQLNMELQLA
Sbjct: 301 VIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLA 360
Query: 390 SQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE 449
+QL+EKH+LRTQTLLCDMLLRD+P GIVTQSPSI DLVKCDGAALYY G + LGVTPTE
Sbjct: 361 AQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTE 420
Query: 450 TQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSH 509
QIKDI +WLL +HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSH
Sbjct: 421 AQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSH 480
Query: 510 TAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRD 569
TAKE+KWGGAKHHP+DKDD +RMHPRSSFKAFLEVVK RSLPWDN E+DAIHSLQLILR
Sbjct: 481 TAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRG 540
Query: 570 SFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWN 629
SFRD + S +K +V+++L DL LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWN
Sbjct: 541 SFRDIDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWN 600
Query: 630 AKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR 689
AKVAELTGL V EAMG SLV DLV+++ E V+ +LH+AL+GEE+KNVE+ L+TFG +
Sbjct: 601 AKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKE 660
Query: 690 KKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPP 749
K+AV +VVNACSS+D+T+NIVGVCFVGQDVT QK+VMDKFI IQGDY++IV SPNPLIPP
Sbjct: 661 KEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPP 720
Query: 750 IFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNA 809
IFASDE CCSEWN AMEK+TGW+ ++IGKMLVGE+FG CCRLKG DA+TKF I LH+A
Sbjct: 721 IFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSA 780
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQ+ EKFPF FD+ GKYV+ALLTANKR + +G+I G+FCFLQIAS ELQ AL VQRQ
Sbjct: 781 IDGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELQHALEVQRQ 840
Query: 870 QEKKCFARLKELAYICQEIKNPL 892
QEKKCFARLKELAYI QEIKNPL
Sbjct: 841 QEKKCFARLKELAYIRQEIKNPL 863
>gi|158322018|gb|ABW33488.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1340 bits (3467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/863 (74%), Positives = 733/863 (84%), Gaps = 29/863 (3%)
Query: 59 GESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSEN 118
GESGKSFDY++S+++ + SVPEQQI+AYLS+IQRGG IQPFGC +AV+E TFR+IAYSEN
Sbjct: 1 GESGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSEN 60
Query: 119 AGEMLGLAPQSVPNLEK--QEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHS 176
A EML LAPQSVP++EK Q++LTIGTDVRTLFT++S+ LEKA A+EI+L+NPIW+H
Sbjct: 61 AVEMLDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHC 120
Query: 177 KNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIK 236
KN+ KPFYAI+HR+DVG+VIDLEP RT D +S AGAVQSQKLAVRAIS+LQSLP GD+
Sbjct: 121 KNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVG 180
Query: 237 LLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRF 296
LLCDTVVE+VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRF
Sbjct: 181 LLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRF 240
Query: 297 LFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALA 356
LF QNRVRMI DC ATP+ VIQ E LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL +A
Sbjct: 241 LFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMA 300
Query: 357 VIINGNDEEAVG-GRSTTRLW--------------------------AFGLQLNMELQLA 389
VIINGND+E G GR++ +LW A GLQLNMELQLA
Sbjct: 301 VIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLA 360
Query: 390 SQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE 449
+QL+EKH+LRTQTLLCDMLLRD+P GIVTQSPSI DLVKCDGAALYY G + LGVTPTE
Sbjct: 361 AQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTE 420
Query: 450 TQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSH 509
QIKDI +WLL +HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSH
Sbjct: 421 AQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSH 480
Query: 510 TAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRD 569
TAKE+KWGGAKHHP+DKDD +RMHPRSSFKAFLEVVK RSLPWDN E+DAIHSLQLILR
Sbjct: 481 TAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRG 540
Query: 570 SFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWN 629
SFRD + S +K +V+++L DL LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWN
Sbjct: 541 SFRDIDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWN 600
Query: 630 AKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR 689
AKVAELTGL V EAMG SLV DLV+++ E V+ +LH+AL+GEE+KNVE+ L+TFG +
Sbjct: 601 AKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKE 660
Query: 690 KKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPP 749
K+AV +VVNACSS+D+T+NIVGVCFVGQDVT QK+VMDKFI IQGDY++IV SPNPLIPP
Sbjct: 661 KEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPP 720
Query: 750 IFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNA 809
IFASDE CCSEWN AMEK+TGW ++IGKM VGE+FG CCRLKG DA+TKF I LH+A
Sbjct: 721 IFASDEYACCSEWNAAMEKVTGWIHDEVIGKMPVGEIFGGCCRLKGQDAVTKFTIVLHSA 780
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQ+ EKFPF FD+ GKYV+ALLTANKR + +G+I G+FCFLQIAS ELQ AL VQRQ
Sbjct: 781 IDGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELQHALEVQRQ 840
Query: 870 QEKKCFARLKELAYICQEIKNPL 892
QEKKCFARLKELAYI QEIKNPL
Sbjct: 841 QEKKCFARLKELAYIRQEIKNPL 863
>gi|2499556|sp|Q40762.1|PHY_PICAB RecName: Full=Phytochrome
gi|1399958|gb|AAB03339.1| phytochrome [Picea abies]
Length = 1136
Score = 1330 bits (3442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/1110 (59%), Positives = 829/1110 (74%), Gaps = 52/1110 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS--VPEQQISAYLSKIQRGGHI 96
++ I Q VDA+L A FE S S FDY++S+ S VP + + AYL ++Q+ I
Sbjct: 26 ARVITQTPVDAKLQAEFEGSVHS---FDYTKSIDISGDSSSVPSETVKAYLQRLQKEMLI 82
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGL--APQSVPNLEKQE---------ILTIGTDV 145
QPFGC +AV+E + V+ YSENA EML + +VP++ Q+ +L IG D
Sbjct: 83 QPFGCVLAVEEGSCAVVGYSENAPEMLDVVGGAHAVPSIGGQQQEGGGGGGGLLRIGMDA 142
Query: 146 RTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTED 205
RTLF +S+ L+KA ++ L+NPI++ +GKPFYAIL+R+D G+VID EP D
Sbjct: 143 RTLFKPASAAALQKAATFADMHLVNPIFVRCNRSGKPFYAILNRIDAGLVIDFEPVMPSD 202
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
+S AGA+QS KLA +AIS+LQSLPGGDI+LLCDTVV+ VR+LTGYDRVM YRFHEDEH
Sbjct: 203 VPVSAAGALQSYKLAAKAISRLQSLPGGDIRLLCDTVVQEVRELTGYDRVMAYRFHEDEH 262
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAE +RPDLEPY GLHYPATDIPQASRFLF +NRVRMI DC A P+ VIQD+ L QP
Sbjct: 263 GEVVAEMRRPDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAPPVNVIQDKRLRQP 322
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTRLWA--- 377
L L GSTLRAPHGCHAQYMANMGSIASL ++V N N +++ GG ++ +LW
Sbjct: 323 LSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTTNENGDDSEGGGQQQPQNRRKLWGLVV 382
Query: 378 -----------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPA 414
FG+QLN E++LA+QL EKH+LR Q +LCDMLLRD+P
Sbjct: 383 CHHTSPRVIPFPLRYACEFLMQVFGIQLNKEVELAAQLREKHILRVQPVLCDMLLRDAPV 442
Query: 415 GIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSL 474
GIV+Q+P+IMDLVKCDGAAL Y + + LG TPTE QI DI +WLL +H DSTGLSTDSL
Sbjct: 443 GIVSQTPNIMDLVKCDGAALLYGKRLWLLGTTPTEAQILDIADWLLEHHRDSTGLSTDSL 502
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
A+AGYP AA+LGDAVCG+A A IT +DFLFWFRSHTAKEI WGGAKH P DKDDG+RMHP
Sbjct: 503 AEAGYPGAASLGDAVCGIAAARITSKDFLFWFRSHTAKEIIWGGAKHDPNDKDDGRRMHP 562
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEVVK RSLPW++ EMDAIHSLQLILRDSF D + S+SK +++A+L DL LQG
Sbjct: 563 RSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRDSFHDIDDSDSKTMIHARLNDLRLQG 622
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+DELS+V EMVRLIETAT PI A+D +G VNGWN K AELTGL +E +G+ L+ DLV
Sbjct: 623 IDELSAVTNEMVRLIETATVPILAIDSNGLVNGWNTKAAELTGLLADEVIGRPLI-DLVQ 681
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCF 714
+ EIV +L+ AL+GEE++NVEIKL+TFG + K V ++VNACSS+D N+VGVCF
Sbjct: 682 HDSVEIVKKMLYLALQGEEEQNVEIKLKTFGIQEEKGPVVLIVNACSSRDLEENVVGVCF 741
Query: 715 VGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSR 774
V QDVT Q++ MDKF H+QGDY+AIV +PNPLIPPIF +DE CSEWN AMEKLTGW R
Sbjct: 742 VAQDVTWQRIAMDKFTHLQGDYRAIVQNPNPLIPPIFGADEYGYCSEWNPAMEKLTGWKR 801
Query: 775 GDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQ 831
++IGKMLVGEVFG C+LKG D LTK I L+NA G++TEKFPF FDR+GK +
Sbjct: 802 EEVIGKMLVGEVFGIHRMSCQLKGQDGLTKLRIVLNNAMAGKETEKFPFSFFDRHGKNTE 861
Query: 832 ALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNP 891
ALL+ANKR + EG I G FCFL + S ELQQAL VQR E+ RLKELAYI QEI+NP
Sbjct: 862 ALLSANKRTDAEGIITGVFCFLHVTSTELQQALQVQRMAEQAAMDRLKELAYIRQEIRNP 921
Query: 892 LSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLL 951
L G+ FT L+E+TDL+E+QKQ+++TSA C++Q++K++ D DLESIEDG LE + EF L
Sbjct: 922 LYGIIFTRKLMESTDLSEEQKQIVQTSALCQRQLVKVLDDADLESIEDGYLELDTIEFTL 981
Query: 952 GSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSA 1011
G+V++AVVSQ M+L RE+ LQLIRD PEEIKT+ +YGDQ R+QQ+L++FL+N +R+S S
Sbjct: 982 GTVLDAVVSQGMILSREKGLQLIRDSPEEIKTMCLYGDQLRLQQILSNFLINALRFSTS- 1040
Query: 1012 EGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMC 1071
EGWV V PT + G ++H EFR+ G+G+P EL+++MF ++ M QEGLGL MC
Sbjct: 1041 EGWVGNKVVPTKRHLGSGVNVMHMEFRITHSGQGIPEELIKEMFVHNQDMFQEGLGLYMC 1100
Query: 1072 RKILKLMNGEVQYIRESERCYFLIIFELPM 1101
++++K+MNG+VQY+RE+ R F+I E P+
Sbjct: 1101 QQLVKIMNGDVQYLREAGRSSFIINVEFPL 1130
>gi|357450589|ref|XP_003595571.1| Phytochrome E [Medicago truncatula]
gi|87241383|gb|ABD33241.1| Bacteriophytochrome [Medicago truncatula]
gi|355484619|gb|AES65822.1| Phytochrome E [Medicago truncatula]
Length = 1122
Score = 1308 bits (3386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/1088 (56%), Positives = 810/1088 (74%), Gaps = 43/1088 (3%)
Query: 40 KAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPF 99
K +AQY VDA L A FEQS GKSF+YS+++ V E+++ YLS+IQRGG IQPF
Sbjct: 30 KTLAQYGVDAELLAEFEQSRVYGKSFEYSKTILDPPRLVSEEKMITYLSRIQRGGFIQPF 89
Query: 100 GCTIAVDEATFRVIAYSENAGEMLG-LAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
GC + ++E+TFR+I YSEN ++LG + + L IG D TLFT S L
Sbjct: 90 GCLVVIEESTFRIIGYSENCFQLLGDIGSEHFMGL-------IGVDATTLFTPPSGSSLV 142
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
KA +REI+ LNPIW+ ++ T KPFYAILHR+DVG++IDLEPAR+ PALS++G+ QSQK
Sbjct: 143 KAVASREISRLNPIWVRARTTEKPFYAILHRIDVGVLIDLEPARSSGPALSLSGSFQSQK 202
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
+AV AIS+LQS DI LLCDTVVE V++LTGY+RVM+Y+FHED+HGEVV+E++R DLE
Sbjct: 203 MAVSAISRLQSCRREDISLLCDTVVEEVQKLTGYERVMIYKFHEDDHGEVVSETRRSDLE 262
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
Y GLHYP+ DIPQA+RFLFKQNRVR+I DCHA P+ VIQ L +PLCLV STLR+PH
Sbjct: 263 SYLGLHYPSIDIPQAARFLFKQNRVRLIYDCHAKPVKVIQSRELKKPLCLVNSTLRSPHD 322
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLWA--------------------- 377
CH QYMANMGSIASL +AV+IN D TTRLW
Sbjct: 323 CHKQYMANMGSIASLVMAVVINEKD--------TTRLWGLLVCHHTSPHHVSFPVRHACE 374
Query: 378 -----FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGA 432
FG+QL ME+QLASQ+ EK +L+TQT+LCDMLLRD+P GIVTQSPSIMDLVKCDGA
Sbjct: 375 FVMHTFGMQLYMEIQLASQMEEKRILKTQTMLCDMLLRDAPFGIVTQSPSIMDLVKCDGA 434
Query: 433 ALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGM 492
ALYY + LG+TPT+ Q+KDI EWLL+ + DSTGL+T+SL DAGYP A LGDAVCGM
Sbjct: 435 ALYYDENCWLLGITPTKLQVKDIAEWLLSNYSDSTGLTTESLVDAGYPGATLLGDAVCGM 494
Query: 493 AVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 552
A A I +R LFWFRSHTAKEI+WGGAKHHP DKDDG +M+PR+SFKAFLEV+KS+SLPW
Sbjct: 495 ASARINQRHILFWFRSHTAKEIQWGGAKHHPTDKDDGGKMNPRTSFKAFLEVLKSKSLPW 554
Query: 553 DNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETA 612
+ +E++AIHSLQLI++D F+D + + K + + + D + G E+SS+A EMVRLIETA
Sbjct: 555 EISEINAIHSLQLIMQDLFQDTDNTCPKTLKDFEKSDALIGGSHEISSIALEMVRLIETA 614
Query: 613 TAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGE 672
PIF VD G +NGWN K+AELTGL EAMGKSL +++V+ + E + N+L AL+G+
Sbjct: 615 AVPIFGVDSDGLINGWNVKIAELTGLPTSEAMGKSLENEVVHVDSRETLTNILRRALQGQ 674
Query: 673 EDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHI 732
++KNVE+K+ F K+ V++++++C S+DYTN IVGV FVGQD+T +K+++ KFI +
Sbjct: 675 DNKNVELKINRFVLHQEKEVVYLMISSCISRDYTNAIVGVGFVGQDITFEKVIVKKFIKL 734
Query: 733 QGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCR 792
+GDYKAI+HS NPLIPPIFASDEN CCSEWN AME++TGW + ++IGKML+GE+FGS CR
Sbjct: 735 EGDYKAIMHSLNPLIPPIFASDENACCSEWNVAMERVTGWKKDEVIGKMLLGEIFGSFCR 794
Query: 793 LKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCF 852
LKG DALT FMI L++ GQD+EK PF +DRNGK+++ +T NKR + I+G FCF
Sbjct: 795 LKGQDALTDFMILLYHGISGQDSEKSPFGFYDRNGKFIETYITTNKRTDASEDIIGCFCF 854
Query: 853 LQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQK 912
L + + +L Q R + ++ ++ KELAYI QE+KNPL+G+ FT+ LLE T ++E+QK
Sbjct: 855 LHVVTEDLNQPFQGHRSKCRQRISKSKELAYILQEMKNPLNGIRFTHKLLENTGISENQK 914
Query: 913 QLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQ 972
QLL+TS ACE+Q++ II+D+DL SI +G+ + EFLLG++++AVVSQVMML++ ++LQ
Sbjct: 915 QLLDTSEACERQIMAIIEDIDLGSINEGTWKLNMKEFLLGNILDAVVSQVMMLIKGKDLQ 974
Query: 973 LIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI 1032
+ +I ++I+TL++YGDQ R+Q VL+D L N+V ++PS GW+E+ + P LK +G
Sbjct: 975 MFHEISDKIQTLSLYGDQIRLQMVLSDILHNIVSHTPSPNGWIEMKITPGLKIIQDGNEF 1034
Query: 1033 VHNEFRMVCPGEGLPPELVQDMFHS-SRWMTQEGLGLSMCRKILKLMNGEVQYIRESERC 1091
+H +FRM G+GLP ++ DMF+ ++W TQEGLGL M RKIL MNG+V Y+RE +C
Sbjct: 1035 IHLKFRMTHSGQGLPSSILHDMFYGENQWTTQEGLGLFMSRKILSRMNGDVHYVREQNKC 1094
Query: 1092 YFLIIFEL 1099
YFLI EL
Sbjct: 1095 YFLIDLEL 1102
>gi|6226671|sp|P42496.2|PHY_ADICA RecName: Full=Phytochrome 1
gi|3327373|dbj|BAA31710.1| phytochrome [Adiantum capillus-veneris]
gi|3337115|dbj|BAA31856.1| phytochrome 1 [Adiantum capillus-veneris]
Length = 1118
Score = 1293 bits (3347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1099 (56%), Positives = 821/1099 (74%), Gaps = 41/1099 (3%)
Query: 40 KAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPF 99
+ IAQ + DA+L+A +E+S ESG SFDYSQSV + Q ++AYL ++QRGG +Q F
Sbjct: 20 RRIAQTSADAKLYAAYEESSESG-SFDYSQSVSAGKEGISSQLVTAYLQRMQRGGLVQQF 78
Query: 100 GCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEK 159
GC IAV+E TFRV+AY NA EML +A Q+VP + + L IG DVRTL + +S+ L++
Sbjct: 79 GCLIAVEEETFRVLAYGANAPEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALDR 138
Query: 160 AFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKL 219
G ++++ NPI + S+++GKPFYAILHR DVG+VIDLEP R +D +++ GA+QS KL
Sbjct: 139 VIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASIT-GGALQSHKL 197
Query: 220 AVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEP 279
A +AI++LQSLPGGDI LLCD+VVE V +LTG+DRVM Y+FHEDEHGEVVAE +R DLEP
Sbjct: 198 AAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLEP 257
Query: 280 YFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGC 339
Y GLHYPATDIPQA+RFLF +NRVRMI DC P+ +IQD+ L QP+ L GS LRAPHGC
Sbjct: 258 YIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSKLRAPHGC 317
Query: 340 HAQYMANMGSIASLALAVIINGNDEEAVGGRST-TRLWA--------------------- 377
H QYMANM SI+SL +AVI+N +D+++ G S +LW
Sbjct: 318 HTQYMANMNSISSLVMAVIVNDSDDDSPGHSSQGIKLWGLVVCHHTSPRYVPFPVRSACE 377
Query: 378 -----FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGA 432
F LQLNME+ +A+Q+ EKH+LRTQTLLCDMLLRD+P GIV+QSP+IMDLV CDGA
Sbjct: 378 FLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDGA 437
Query: 433 ALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGM 492
ALYY K + LG TPTE QI DI WLL H DSTGLSTDSLA GYP+A+ LGDAVCG+
Sbjct: 438 ALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCGL 497
Query: 493 AVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 552
A A IT DFLFWFRSHTAKE++WGGA+H PE++DDG+RMHPRSSFKAFLEVVK +SLPW
Sbjct: 498 AAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLPW 557
Query: 553 DNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETA 612
++ EMDAIHSLQLILR SF+D + SN+K +++A+L DL+LQG+DELS+VA EMVRLIETA
Sbjct: 558 EDVEMDAIHSLQLILRGSFQDIDDSNTKTMIHARLNDLKLQGLDELSTVASEMVRLIETA 617
Query: 613 TAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGE 672
TAPI AVD G +NGWN KVAELTGLS E AMGKSL +LV++E + IV+ +LH AL+GE
Sbjct: 618 TAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLALEGE 677
Query: 673 EDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHI 732
E++++EI LRT+ +K V ++VN C S+D +NN+VGVCFVGQDVT QKLV+D+FI I
Sbjct: 678 EEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKLVLDRFIRI 737
Query: 733 QGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG---S 789
QGDYKAIV S NPLIPPIF +DE CSEWN AMEKL+ W R +++GKMLVGE+FG
Sbjct: 738 QGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVGEIFGLQMV 797
Query: 790 CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGA 849
CCRL+G D +TK MI L++A GQ++EKFP +DRNG+ V+ALL A+KR + +G+I G
Sbjct: 798 CCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTDADGRITGV 857
Query: 850 FCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTE 909
FCFL ASPEL QAL ++R +EK KEL+Y+ +E+K PL G++FT ++LE T+LT
Sbjct: 858 FCFLHTASPELLQALIIKRAKEKVD----KELSYVKEELKKPLEGLAFTRTVLEGTNLTI 913
Query: 910 DQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRER 969
+Q+QL++T+A CE+Q+ KI++D DL +IE+G ++ E +EF +GSVI+AV+SQ M R +
Sbjct: 914 EQRQLIKTNAWCERQLRKILED-DLNNIEEGYMDLEMSEFFMGSVIDAVISQGMAASRGK 972
Query: 970 NLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSA----EGWVEIHVRPTLKQ 1025
+Q++ +IP ++K + ++GDQAR+QQVLAD L + ++ + + WV I V T +
Sbjct: 973 GVQILTEIPNDVKLMCLFGDQARLQQVLADLLFCAINHATTTNEDEKDWVTIKVSRTKTR 1032
Query: 1026 SSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYI 1085
+G ++H EFR+ G+G+ LV++M + S+ T EGL +S+ +++LMNG+V+Y
Sbjct: 1033 LDDGVHLMHFEFRISHSGQGISEALVEEMTNKSQKWTPEGLAISISCTLIRLMNGDVKYT 1092
Query: 1086 RESERCYFLIIFELPMPRR 1104
++ FL+ + P+ R
Sbjct: 1093 TDAGNKCFLVTIQFPLAHR 1111
>gi|77963962|gb|ABB13323.1| phytochrome B [Hordeum vulgare subsp. vulgare]
gi|77963964|gb|ABB13324.1| phytochrome B [Hordeum vulgare subsp. vulgare]
gi|77963966|gb|ABB13325.1| phytochrome B [Hordeum vulgare subsp. vulgare]
Length = 814
Score = 1286 bits (3329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/814 (76%), Positives = 697/814 (85%), Gaps = 40/814 (4%)
Query: 41 AIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFG 100
A+AQYT+DA LHAVFEQSG SG+SFDYSQS+ EQQI+AYLS+IQRGGHIQPFG
Sbjct: 1 AVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSSEQQIAAYLSRIQRGGHIQPFG 60
Query: 101 CTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSV 155
CT+AV D+++FR++A+SENA ++L L+P SVP+L+ +++G D R LF+ SS V
Sbjct: 61 CTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSPSSGV 120
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LLE+AF AREI+LLNP+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQ
Sbjct: 121 LLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 180
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVY+FH+DEHGEV+AES+R
Sbjct: 181 SQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAESRRG 240
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF+QNRVRMI DCHA + VIQD + QPLCLVGSTLR+
Sbjct: 241 DLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGSTLRS 300
Query: 336 PHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGR----STTRLW-------------- 376
PHGCHAQYMANMGSIASL +AVII+ G ++E R S +LW
Sbjct: 301 PHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSPRCIP 360
Query: 377 ------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIM 424
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIM
Sbjct: 361 FPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIM 420
Query: 425 DLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAAT 484
DLVKCDGAAL+Y GKYYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP A
Sbjct: 421 DLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGATA 480
Query: 485 LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 544
LGDAVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV
Sbjct: 481 LGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 540
Query: 545 VKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSS 600
VKSRSLPW+NAEMDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G+DELSS
Sbjct: 541 VKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDELSS 600
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
VAREMVRLIETAT PIFAVD +GC+NGWNAKVAELTGL+VEEAMGKSL+ DL++KE EEI
Sbjct: 601 VAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKESEEI 660
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVT 720
V+ LL AL+GEE NVEIKL+TFG+E K +FV+VNACSS+DYT NIVGVCFVGQD+T
Sbjct: 661 VEKLLSQALRGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDIT 720
Query: 721 DQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGK 780
QK+VMDKF++IQGDYKAIVH+PNPLIPPIFASDEN CCSEWNTAME LTGWSRG+++GK
Sbjct: 721 GQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTGWSRGEVVGK 780
Query: 781 MLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD 814
+LVGEVFG+CCRLKGPDALTKFMIALHNA GGQD
Sbjct: 781 LLVGEVFGNCCRLKGPDALTKFMIALHNAIGGQD 814
>gi|740579|prf||2005378A phytochrome
Length = 1117
Score = 1281 bits (3316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/1099 (56%), Positives = 819/1099 (74%), Gaps = 42/1099 (3%)
Query: 40 KAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPF 99
+ IAQ + +A+L+A +E+S ESG SFDYSQSV + Q ++AYL ++QRGG +Q F
Sbjct: 20 RRIAQTSANAKLYAAYEESSESG-SFDYSQSVSAGKEGISSQLVTAYLQRMQRGGLVQQF 78
Query: 100 GCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEK 159
GC IAV+E TFRV+ E A EML +A Q+VP + + L IG DVRTL + +S+ L++
Sbjct: 79 GCLIAVEEETFRVLHMCE-APEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALDR 137
Query: 160 AFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKL 219
G ++++ NPI + S+++GKPFYAILHR DVG+VIDLEP R +D +++ GA+QS KL
Sbjct: 138 VIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASIT-GGALQSHKL 196
Query: 220 AVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEP 279
A +AI++LQSLPGGDI LLCD+VVE V +LTG+DRVM Y+FHEDEHGEVVAE +R DLEP
Sbjct: 197 AAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLEP 256
Query: 280 YFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGC 339
Y GLHYPATDIPQA+RFLF +NRVRMI DC P+ +IQD+ L QP+ L GSTLRAPHGC
Sbjct: 257 YIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSTLRAPHGC 316
Query: 340 HAQYMANMGSIASLALAVIINGNDEEAVGGRST-TRLWA--------------------- 377
H QYMANM SI+SL +AVI+N +D+++ G S +LW
Sbjct: 317 HTQYMANMNSISSLVMAVIVNDSDDDSAGHSSQGIKLWGLVVCHHTSPRYVPFPVRSACE 376
Query: 378 -----FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGA 432
F LQLNME+ +A+Q+ EKH+LRTQTLLCDMLLRD+P GIV+QSP+IMDLV CDGA
Sbjct: 377 FLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDGA 436
Query: 433 ALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGM 492
ALYY K + LG TPTE QI DI WLL H DSTGLSTDSLA GYP+A+ LGDAVCG+
Sbjct: 437 ALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCGL 496
Query: 493 AVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 552
A A IT DFLFWFRSHTAKE++WGGA+H PE++DDG+RMHPRSSFKAFLEVVK +SLPW
Sbjct: 497 AAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLPW 556
Query: 553 DNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETA 612
++ EMDAIHSLQLILR SF+D + SN+K +++A+L DL+LQG+DELS+VA EMVRLIETA
Sbjct: 557 EDVEMDAIHSLQLILRGSFQDIDDSNTKTMIHARLNDLKLQGLDELSTVASEMVRLIETA 616
Query: 613 TAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGE 672
TAPI AVD G +NGWN KVAELTGLS E AMGKSL +LV++E + IV+ +LH AL+GE
Sbjct: 617 TAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLALEGE 676
Query: 673 EDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHI 732
E++++EI LRT+ +K V ++VN C S+D +NN+VGVCFVGQDVT QKLV+D+FI I
Sbjct: 677 EEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKLVLDRFIRI 736
Query: 733 QGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG---S 789
QGDYKAIV S NPLIPPIF +DE CSEWN AMEKL+ W R +++GKMLVGE+FG
Sbjct: 737 QGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVGEIFGLQMV 796
Query: 790 CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGA 849
CCRL+G D +TK MI L++A GQ++EKFP +DRNG+ V+ALL A+KR + +G+I G
Sbjct: 797 CCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTDADGRITGV 856
Query: 850 FCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTE 909
FCFL ASPEL QAL ++R +EK KEL+Y+ +E+K PL G++FT ++LE T+LT
Sbjct: 857 FCFLHTASPELLQALIIKRAKEKVD----KELSYVKEELKKPLEGLAFTRTVLEGTNLTI 912
Query: 910 DQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRER 969
+Q+QL++T+A CE+Q+ KI++D DL +IE+G ++ E +EF +GSVI+AV+SQ M R +
Sbjct: 913 EQRQLIKTNAWCERQLRKILED-DLNNIEEGYMDLEMSEFFMGSVIDAVISQGMAASRGK 971
Query: 970 NLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSA----EGWVEIHVRPTLKQ 1025
+Q++ +IP ++K + ++GDQAR+QQVLAD L + ++ + + WV I V T +
Sbjct: 972 GVQILTEIPNDVKLMCLFGDQARLQQVLADLLFCAINHATTTNEDEKDWVTIKVSRTKTR 1031
Query: 1026 SSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYI 1085
+G ++H E R+ G+G+ LV++M + S+ T EGL +S+ +++LMNG+V+Y
Sbjct: 1032 LDDGVHLMHFESRISHSGQGISEALVEEMTNKSQKWTPEGLAISISCTLIRLMNGDVKYT 1091
Query: 1086 RESERCYFLIIFELPMPRR 1104
++ FL+ + P+ R
Sbjct: 1092 TDAGNKCFLVTIQFPLAHR 1110
>gi|183239026|gb|ACC60971.1| phytochrome C [Vitis riparia]
Length = 1123
Score = 1281 bits (3314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1129 (55%), Positives = 809/1129 (71%), Gaps = 46/1129 (4%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV- 71
+S + S +S+ R+ H A + +AQ +DA+LH FE ES + FDYS S+
Sbjct: 4 KSTNKTNCSRSSSARSKHGA-------RVVAQTPIDAQLHVNFE---ESERHFDYSASID 53
Query: 72 ---RTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQ 128
+ + VP +SAYL K+QRG IQPFGC IAVDE V+AYSENA EML LAP
Sbjct: 54 FNISSSTGDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPH 113
Query: 129 SVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILH 188
+VP++E+QE L IGTDVRTLF SS + L+KA E+ LLNPI +H +N+GKPFYAILH
Sbjct: 114 AVPSIEQQEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILH 173
Query: 189 RVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
R+DVG++IDLEP D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ +
Sbjct: 174 RIDVGLIIDLEPVNPADVPITAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASE 233
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE ++PDLEPY GLHYPATDIPQASRFLF +N+VRMI D
Sbjct: 234 LTGYDRVMVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICD 293
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ++ L QPL L GSTLR+PHGCHAQYMANMGS+ASL ++V IN D++
Sbjct: 294 CLAPPVKVIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTES 353
Query: 369 GRSTTR-LWA--------------------------FGLQLNMELQLASQLSEKHVLRTQ 401
+ R LW FG+Q++ E++LA+Q+ EKH+L+TQ
Sbjct: 354 EQQKGRKLWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQ 413
Query: 402 TLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLT 461
T+LCDMLLRD+P GIVTQSP++MDLV+CDGAALYYQ K++ LGVTPTE QI+DIVEWLL
Sbjct: 414 TVLCDMLLRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLE 473
Query: 462 YHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKH 521
YH STGLSTDSL +AGYP A LGDAVCG+A I DFLFWFRSHTAKEIKWGGAKH
Sbjct: 474 YHSGSTGLSTDSLMEAGYPAALVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKH 533
Query: 522 HPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA 581
P+DKDDG++MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR S +D A +SK
Sbjct: 534 DPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDKSADDSKM 593
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+VN VD ++ D+L V EMVRLIETA+ PI AVD GC+NGWN K AELTGL ++
Sbjct: 594 IVNVPSVDASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQ 653
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
+A+G L+ DLV + ++V +L AL+G E++NVEIKL+TFG + V +VVNAC
Sbjct: 654 QAIGMPLI-DLVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACC 712
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D +N+VGVCFVGQD+T QK+VMDK+ IQGDY IV +P+ LIPPIF DE+ C E
Sbjct: 713 SRDIKDNVVGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLE 772
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM+ L+G R + +ML+GEVF C++K D LTK I L+ A GQD +K
Sbjct: 773 WNDAMQNLSGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKL 832
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F FD++GKY++ALL+ANKR + EG+I G CFL +ASPELQ A+ VQR E+ L
Sbjct: 833 LFGFFDQHGKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSL 892
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K+LAYI Q+I+ PL+G+ F +L+++++L++DQK+ L TS C++Q+ KI+ D DLESIE
Sbjct: 893 KKLAYIRQQIRKPLNGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIE 952
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+ +E AEF LG V+ V+SQ M+L RER +++I D P E+ ++ +YGD R+QQVL+
Sbjct: 953 ECYMELNSAEFNLGEVLEVVISQAMILSRERRVEIIYDSPAEVSSMFLYGDNLRLQQVLS 1012
Query: 999 DFLLNMVRYSPSAEG-WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS 1057
DFL N + ++P+ EG V + V P + IVH EFR+ P G+P +L+Q MFH
Sbjct: 1013 DFLTNALLFTPAFEGSSVALRVIPRRESIGTKVHIVHLEFRIAHPAPGIPEDLIQQMFHH 1072
Query: 1058 SRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGS 1106
+ +++EGLGL + +K++K+MNG VQY+RE++ F+I+ E P+ + S
Sbjct: 1073 RQGVSREGLGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPLAHQNS 1121
>gi|297800250|ref|XP_002868009.1| hypothetical protein ARALYDRAFT_914880 [Arabidopsis lyrata subsp.
lyrata]
gi|297313845|gb|EFH44268.1| hypothetical protein ARALYDRAFT_914880 [Arabidopsis lyrata subsp.
lyrata]
Length = 1116
Score = 1278 bits (3307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/1106 (57%), Positives = 812/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAALFADFDQSIYSGKSFNYSKSVISPPNY 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
VP++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN+ E LGL +
Sbjct: 62 VPDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENSSEFLGLLSLASTSHSGEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+K + L IG D RTLFT SS L KA EI+LLNP+ +HS+ T KPFYAILHR+D G
Sbjct: 122 DKVKGL-IGIDARTLFTPSSGASLAKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IV+DLEPA++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI CDTVVE V++LTGYD
Sbjct: 181 IVMDLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGAFCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ V+Q E L +PLCLV STLRAPHGCH QYMANMGS+ASLALA++I G D VG
Sbjct: 301 VKVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVIKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQLASQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP E+Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP A +LGDAVCG+A A I+ +D+L WFRS+TA IKWGGAKH P+DKDD RMHP
Sbjct: 481 VDAGYPGAISLGDAVCGVAAAGISSKDYLLWFRSNTASAIKWGGAKHRPKDKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEV KSRSLPW+ +E+DAIHSL+LI+R+SF ++ + V++ V +
Sbjct: 541 RSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF-----TSCRPVLSGNDV---ARD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA---VFVVVNACSSKDYTNNIVG 711
+E ++++LL AL+GEE+K+V +KLR FG N + V V+VN+C+S+DYT I+G
Sbjct: 653 EESRAVLESLLCKALQGEEEKSVMLKLRKFGQNNHPDSSSDVCVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDEN CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQD-TEKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ G + TE F + G+Y+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVTESSLVEFFSKEGRYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+A LTANK N+EG+++ F FLQI + E L+ +E L EL YI QEIKN
Sbjct: 833 EASLTANKSTNIEGKVIRCFFFLQIINKE--SGLSCPELKESA--QSLNELTYIRQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PL+G+ F + LLE+++++ Q+Q LETS ACEKQ+ II+ DL+SIE+G L+ E EF
Sbjct: 889 PLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIEGTDLKSIEEGKLQLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++ ++SQVM+LLRE NLQL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LENILDTIISQVMILLREGNLQLRVEVAEEIKTLPLYGDRVKLQLILADLLRNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS-SRWMTQEGLGLS 1069
WV I++ + S + +H +FRM+ PG+GLP E++ DMF + W T +GLGL
Sbjct: 1009 PNSWVAIYISRGQELSRDNSHYIHLQFRMIHPGKGLPSEMLSDMFETRDGWDTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+F +
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFQV 1094
>gi|226234965|dbj|BAH47472.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1277 bits (3305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/1106 (57%), Positives = 812/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ L IG D RTLF+ SS L KA EI+LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 NNVKGL-IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IVIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYD
Sbjct: 181 IVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ ++Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKIVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
D GYP A + GDA+CG+A A I+ +DFL WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDVGYPGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEV KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++L+ AL+GEE+KNV +KLR FG N VFV+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSGVFVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDEN CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+A LTANK N EG+++G F FLQI S + L+ +E L EL Y+ QEIKN
Sbjct: 833 EASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNELTYMKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LETS ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++++SQVM++L+ERN QL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LEYILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS-SRWMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTRDGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226234981|dbj|BAH47471.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1277 bits (3304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/1106 (57%), Positives = 812/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ L IG D RTLF+ SS L KA EI+LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 NNVKGL-IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IVIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYD
Sbjct: 181 IVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ ++Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKIVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
D GYP A + GDA+CG+A A I+ +DFL WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDVGYPGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEV KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++L+ AL+GEE+KNV +KLR FG N VFV+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSGVFVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDEN CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+A LTANK N EG+++G F FLQI S + L+ +E L EL Y+ QEIKN
Sbjct: 833 EASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNELTYMKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LETS ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGADLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++++SQVM++L+ERN QL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LEYILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS-SRWMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTRDGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|240255991|ref|NP_193547.4| phytochrome E [Arabidopsis thaliana]
gi|332278136|sp|P42498.2|PHYE_ARATH RecName: Full=Phytochrome E
gi|332658600|gb|AEE84000.1| phytochrome E [Arabidopsis thaliana]
Length = 1112
Score = 1276 bits (3302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/1105 (56%), Positives = 811/1105 (73%), Gaps = 46/1105 (4%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ + + AQY+VDA L A F QS +GKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKPQPQKSNT-------AQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNH 57
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLA--PQSVPNLEK 135
VP++ I+AYLS IQRGG +QPFGC IAV+E +FR++ S+N+ + LGL P + + E
Sbjct: 58 VPDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLSLPSTSHSGEF 117
Query: 136 QEIL-TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
++ IG D RTLFT SS L KA EI+LLNP+ +HS+ T KPFYAILHR+D GI
Sbjct: 118 DKVKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGI 177
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
V+DLEPA++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYDR
Sbjct: 178 VMDLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDR 237
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP+
Sbjct: 238 VMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPV 297
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVGG 369
V+Q E L +PLCLV STLRAPHGCH QYMANMGS+ASLALA+++ G D VG
Sbjct: 298 KVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSSKLWGLVVGH 357
Query: 370 RSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
+ R + AFGLQL MELQLASQL+EK +RTQTLLCDMLLRD+ + I
Sbjct: 358 HCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAI 417
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSLA 475
VTQSP IMDLVKCDGAALYY+GK + +GVTP E+Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 418 VTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLV 477
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A +LGDAVCG+A A + +D+L WFRS+TA IKWGGAKHHP+DKDD RMHPR
Sbjct: 478 DAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAGRMHPR 537
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSF AFLEV KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++ V +
Sbjct: 538 SSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSGNGV---ARDA 589
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL ++V +
Sbjct: 590 NELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQE 649
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVGV 712
E +++LL AL+GEE+K+V +KLR FG N V V+VN+C+S+DYT NI+GV
Sbjct: 650 ESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDYTENIIGV 709
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDEN CCSEWN AMEKLTGW
Sbjct: 710 CFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGW 769
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYVQ 831
S+ ++IGKML GEVFG C++K D+LTKF+I+L+ G + E F++ GKY++
Sbjct: 770 SKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFNKEGKYIE 829
Query: 832 ALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNP 891
A LTANK N+EG+++ F FLQI + E L+ +E L EL Y+ QEIKNP
Sbjct: 830 ASLTANKSTNIEGKVIRCFFFLQIINKE--SGLSCPELKESA--QSLNELTYVRQEIKNP 885
Query: 892 LSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLL 951
L+G+ F + LLE+++++ Q+Q LETS ACEKQ+ II+ DL+SIE+G L+ E EF L
Sbjct: 886 LNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGKLQLETEEFRL 945
Query: 952 GSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSA 1011
++++ ++SQVM++LRERN QL ++ EEIKTL + GD+ ++Q +LAD L N+V ++P
Sbjct: 946 ENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILADLLRNIVNHAPFP 1005
Query: 1012 EGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS-SRWMTQEGLGLSM 1070
WV I + P + S + +H +FRM+ PG+GLP E++ DMF + W+T +GLGL +
Sbjct: 1006 NSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDGWVTPDGLGLKL 1065
Query: 1071 CRKILKLMNGEVQYIRESERCYFLI 1095
RK+L+ MNG V Y+RE ERC+F +
Sbjct: 1066 SRKLLEQMNGRVSYVREDERCFFQV 1090
>gi|452817|emb|CAA54075.1| phytochrome E [Arabidopsis thaliana]
gi|5816999|emb|CAB53654.1| phytochrome E [Arabidopsis thaliana]
gi|7268606|emb|CAB78815.1| phytochrome E [Arabidopsis thaliana]
Length = 1112
Score = 1276 bits (3302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/1105 (56%), Positives = 811/1105 (73%), Gaps = 46/1105 (4%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ + + AQY+VDA L A F QS +GKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKPQPQKSNT-------AQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNH 57
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLA--PQSVPNLEK 135
VP++ I+AYLS IQRGG +QPFGC IAV+E +FR++ S+N+ + LGL P + + E
Sbjct: 58 VPDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLSLPSTSHSGEF 117
Query: 136 QEIL-TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
++ IG D RTLFT SS L KA EI+LLNP+ +HS+ T KPFYAILHR+D GI
Sbjct: 118 DKVKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGI 177
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
V+DLEPA++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYDR
Sbjct: 178 VMDLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDR 237
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP+
Sbjct: 238 VMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPV 297
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVGG 369
V+Q E L +PLCLV STLRAPHGCH QYMANMGS+ASLALA+++ G D VG
Sbjct: 298 KVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSSKLWGLVVGH 357
Query: 370 RSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
+ R + AFGLQL MELQLASQL+EK +RTQTLLCDMLLRD+ + I
Sbjct: 358 HCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAI 417
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSLA 475
VTQSP IMDLVKCDGAALYY+GK + +GVTP E+Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 418 VTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLV 477
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A +LGDAVCG+A A + +D+L WFRS+TA IKWGGAKHHP+DKDD RMHPR
Sbjct: 478 DAGYPGAISLGDAVCGVAAAEFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAGRMHPR 537
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSF AFLEV KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++ V +
Sbjct: 538 SSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSGNGV---ARDA 589
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL ++V +
Sbjct: 590 NELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQE 649
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVGV 712
E +++LL AL+GEE+K+V +KLR FG N V V+VN+C+S+DYT NI+GV
Sbjct: 650 ESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDYTENIIGV 709
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDEN CCSEWN AMEKLTGW
Sbjct: 710 CFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGW 769
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYVQ 831
S+ ++IGKML GEVFG C++K D+LTKF+I+L+ G + E F++ GKY++
Sbjct: 770 SKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFNKEGKYIE 829
Query: 832 ALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNP 891
A LTANK N+EG+++ F FLQI + E L+ +E L EL Y+ QEIKNP
Sbjct: 830 ASLTANKSTNIEGKVIRCFFFLQIINKE--SGLSCPELKESA--QSLNELTYVRQEIKNP 885
Query: 892 LSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLL 951
L+G+ F + LLE+++++ Q+Q LETS ACEKQ+ II+ DL+SIE+G L+ E EF L
Sbjct: 886 LNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGKLQLETEEFRL 945
Query: 952 GSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSA 1011
++++ ++SQVM++LRERN QL ++ EEIKTL + GD+ ++Q +LAD L N+V ++P
Sbjct: 946 ENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILADLLRNIVNHAPFP 1005
Query: 1012 EGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLSM 1070
WV I + P + S + +H +FRM+ PG+GLP E++ DMF + W+T +GLGL +
Sbjct: 1006 NSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDGWVTPDGLGLKL 1065
Query: 1071 CRKILKLMNGEVQYIRESERCYFLI 1095
RK+L+ MNG V Y+RE ERC+F +
Sbjct: 1066 SRKLLEQMNGRVSYVREDERCFFQV 1090
>gi|226234967|dbj|BAH47473.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1276 bits (3302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/1106 (57%), Positives = 811/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ L IG D RTLF+ SS L KA EI+LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 NNVKGL-IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IVIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYD
Sbjct: 181 IVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ ++Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKIVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
D GYP A + GDA+CG+A A I+ +DFL WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDVGYPGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEV KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++L+ AL+GEE+KNV +KLR FG N VFV+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSGVFVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDEN CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
A LTANK N EG+++G F FLQI S + L+ +E L EL Y+ QEIKN
Sbjct: 833 VASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNELTYMKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LETS ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++++SQVM++L+ERN QL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LEYILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS-SRWMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTRDGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226234969|dbj|BAH47474.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1275 bits (3300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/1106 (57%), Positives = 811/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ L IG D RTLF+ SS L KA EI+LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 NNVKGL-IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IVIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYD
Sbjct: 181 IVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ ++Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKIVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLIQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
D GYP A + GDA+CG+A A I+ +DFL WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDVGYPGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEV KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++L+ AL+GEE+KNV +KLR FG N VFV+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSGVFVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDEN CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
A LTANK N EG+++G F FLQI S + L+ +E L EL Y+ QEIKN
Sbjct: 833 VASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNELTYMKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LETS ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++++SQVM++L+ERN QL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LEYILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS-SRWMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTRDGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226234971|dbj|BAH47475.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1273 bits (3295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/1106 (56%), Positives = 813/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ L IG D RTLF+ SS L KA EI+LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 NNVKGL-IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IVIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYD
Sbjct: 181 IVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ V+Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP A + GDA+CG+A A I+ +D+L WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLE+ KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++L+ AL+GEE+KNV +KLR FG N V V+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDE+ CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+A LTANK N EG+++G F FLQI S + L+ +E L EL+Y+ QEIKN
Sbjct: 833 EASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNELSYMKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LETS ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++++SQVM++L+ERN QL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226234973|dbj|BAH47476.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1273 bits (3295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/1106 (56%), Positives = 813/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ + L IG D RTLF+ SS L KA EI+LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 DNVKGL-IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IVIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYD
Sbjct: 181 IVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ V+Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP A + GDA+CG+A A I+ +D+L WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLE+ KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++L+ AL+GEE+KNV +KLR FG N V V+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDE+ CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+A LTANK N EG+++G F FLQI S + L+ +E L EL Y+ QEIKN
Sbjct: 833 EASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNELTYMKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LETS ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++++SQVM++L+ERN QL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|225447543|ref|XP_002268724.1| PREDICTED: phytochrome C [Vitis vinifera]
Length = 1118
Score = 1272 bits (3291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/1124 (55%), Positives = 808/1124 (71%), Gaps = 46/1124 (4%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV- 71
+S + S +S+ R+ H A + +AQ +DA+LH FE ES + FDYS SV
Sbjct: 4 KSTNKTNCSRSSSARSKHGA-------RVVAQTPIDAQLHVNFE---ESERHFDYSASVD 53
Query: 72 ---RTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQ 128
+ + VP +SAYL K+QRG IQPFGC IAVDE V+AYSENA EML LAP
Sbjct: 54 FNISSSTSDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPH 113
Query: 129 SVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILH 188
+VP++E+QE L IGTDVRTLF SS + L+KA E+ LLNPI +H +N+GKPFYAILH
Sbjct: 114 AVPSIEQQEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILH 173
Query: 189 RVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
R+DVG++IDLEP D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ +
Sbjct: 174 RIDVGLIIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASE 233
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE ++PDLEPY GLHYPATDIPQASRFLF +N+VRMI D
Sbjct: 234 LTGYDRVMVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICD 293
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ++ L QPL L GSTLR+PHGCHAQYMANMGS+ASL ++V IN D++
Sbjct: 294 CLAPPVKVIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTES 353
Query: 369 GRSTTR-LWA--------------------------FGLQLNMELQLASQLSEKHVLRTQ 401
+ R LW FG+Q++ E++LA+Q+ EKH+L+TQ
Sbjct: 354 EQQKGRKLWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQ 413
Query: 402 TLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLT 461
T+LCDMLLRD+P GIVTQSP++MDLV+CDGAALYYQ K++ LGVTPTE QI+DIVEWLL
Sbjct: 414 TVLCDMLLRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLE 473
Query: 462 YHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKH 521
YH STGLSTDSL +AGYP A+ LGDAVCG+A I DFLFWFRSHTAKEIKWGGAKH
Sbjct: 474 YHSGSTGLSTDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKH 533
Query: 522 HPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA 581
P+DKDDG++MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR S +D A +SK
Sbjct: 534 DPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDKSADDSKM 593
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+VN VD ++ D+L V EMVRLIETA+ PI AVD GC+NGWN K AELTGL ++
Sbjct: 594 IVNVPSVDASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQ 653
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
+A+G L+ +LV + ++V +L AL+G E++NVEIKL+TFG + V +VVNAC
Sbjct: 654 QAIGMPLI-NLVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACC 712
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D +N+VGVCFVGQD+T QK+VMDK+ IQGDY IV +P+ LIPPIF DE+ C E
Sbjct: 713 SRDIKDNVVGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLE 772
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM+ L+G R + +ML+GEVF C++K D LTK I L+ A GQD +K
Sbjct: 773 WNDAMQNLSGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKL 832
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F FD++GKY++ALL+ANKR + EG+I G CFL +ASPELQ A+ VQR E+ L
Sbjct: 833 LFGFFDQHGKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSL 892
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K+LAYI Q+I+ PL+G+ F +L+++++L++DQK+ L TS C++Q+ KI+ D DLESIE
Sbjct: 893 KKLAYIRQQIRKPLNGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIE 952
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+ +E EF LG V+ V+SQ M+L RER +++I D P E+ ++ +YGD R+QQVL+
Sbjct: 953 ECYMELNSGEFNLGEVLEVVISQAMILSRERRVEIIYDSPAEVSSMLLYGDNLRLQQVLS 1012
Query: 999 DFLLNMVRYSPSAEG-WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS 1057
DFL N + ++P+ EG V + V P + IVH EFR+ P G+P +L+Q MFH
Sbjct: 1013 DFLTNALLFTPAFEGSSVALRVIPRRECIGTKVHIVHLEFRIAHPAPGIPEDLIQQMFHH 1072
Query: 1058 SRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
S+ +++EGLGL + +K++K+MNG VQY+RE++ F+I+ E P+
Sbjct: 1073 SQGVSREGLGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPL 1116
>gi|226235029|dbj|BAH47480.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1271 bits (3290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1106 (56%), Positives = 812/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ L IG D RTLF+ SS L KA EI+LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 NNVKGL-IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IVIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYD
Sbjct: 181 IVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ V+Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP A + GDA+CG+A A I+ +D+L WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLE+ KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++L+ AL+GEE+KNV +KLR FG N V V+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+F+ +QGDYK IV S NPLIPPIFASDE+ CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFMRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+A LTANK N EG+++G F FLQI S + L+ +E L EL Y+ QEIKN
Sbjct: 833 EASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNELTYMKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LETS ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++++SQVM++L+ERN QL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226235031|dbj|BAH47481.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1270 bits (3287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1106 (56%), Positives = 812/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ L IG D RTLF+ SS L KA E +LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 NNVKGL-IGIDARTLFSPSSGASLSKAASFTENSLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IVIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYD
Sbjct: 181 IVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ V+Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP A + GDA+CG+A A I+ +D+L WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLE+ KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++L+ AL+GEE+KNV +KLR FG N V V+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDE+ CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+A LTANK N EG+++G F FLQI S + L+ +E L EL+Y+ QEIKN
Sbjct: 833 EASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNELSYMKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LETS ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++++SQVM++L+ERN QL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|183239018|gb|ACC60967.1| phytochrome C [Vitis vinifera]
Length = 1118
Score = 1270 bits (3286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1124 (54%), Positives = 808/1124 (71%), Gaps = 46/1124 (4%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV- 71
+S + S +S+ R+ H A + +AQ +DA+LH FE ES + FDYS SV
Sbjct: 4 KSTNKTNCSRSSSARSKHGA-------RVVAQTPIDAQLHVNFE---ESERHFDYSASVD 53
Query: 72 ---RTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQ 128
+ + VP +SAYL K+QRG IQPFGC IAVDE V+AYSENA EML LAP
Sbjct: 54 FNISSSTSDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPH 113
Query: 129 SVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILH 188
+VP++E+QE L IGTDVRTLF SS + L+KA E+ LLNPI +H +N+GKPFYAILH
Sbjct: 114 AVPSIEQQEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILH 173
Query: 189 RVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
R+DVG++IDLEP D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ +
Sbjct: 174 RIDVGLIIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASE 233
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE ++PDLEPY GLHYPATDIPQASRFLF +N+VRMI D
Sbjct: 234 LTGYDRVMVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICD 293
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ++ L QPL L GSTLR+PHGCHAQYMANMGS+ASL ++V IN D++
Sbjct: 294 CLAPPVKVIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTES 353
Query: 369 GRSTTR-LWA--------------------------FGLQLNMELQLASQLSEKHVLRTQ 401
+ R LW FG+Q++ E++LA+Q+ EKH+L+TQ
Sbjct: 354 KQQKGRKLWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQ 413
Query: 402 TLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLT 461
T+LCDMLLRD+P GIVTQSP++MDLV+CDGAALYYQ K++ LGVTPTE QI+DIVEWLL
Sbjct: 414 TVLCDMLLRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLE 473
Query: 462 YHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKH 521
+H STGLSTDSL +AGYP A+ LGDAVCG+A I DFLFWFRSHTAKEIKWGGAKH
Sbjct: 474 HHSGSTGLSTDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKH 533
Query: 522 HPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA 581
P+DKDDG++MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR S +D A +SK
Sbjct: 534 DPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDKSADDSKM 593
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+VN VD ++ D+L V EMVRLIETA+ PI AVD GC+NGWN K AELTGL ++
Sbjct: 594 IVNVPSVDASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQ 653
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
+A+G L+ +LV + ++V +L AL+G E++NVEIKL+TFG + V +VVNAC
Sbjct: 654 QAIGMPLI-NLVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACC 712
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D +N+VGVCFVGQD+T QK+VMDK+ IQGDY IV +P+ LIPPIF DE+ C E
Sbjct: 713 SRDIKDNVVGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLE 772
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM+ L+G R + +ML+GEVF C++K D LTK I L+ A GQD +K
Sbjct: 773 WNDAMQNLSGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKL 832
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F FD++GKY++ALL+ANKR + EG+I G CFL +ASPELQ A+ VQR E+ L
Sbjct: 833 LFGFFDQHGKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSL 892
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K+LAYI Q+I+ P++G+ F +L+++++L++DQK+ L TS C++Q+ KI+ D DLESIE
Sbjct: 893 KKLAYIRQQIRKPINGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIE 952
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+ +E EF LG V+ V+SQ M+L RER +++I D P E+ ++ +YGD R+QQVL+
Sbjct: 953 ECYMELNSGEFNLGEVLEVVISQAMILSRERRVEIIYDSPAEVSSMLLYGDNLRLQQVLS 1012
Query: 999 DFLLNMVRYSPSAEG-WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS 1057
DFL N + ++P+ EG V + V P + IVH EFR+ P G+P +L+Q MFH
Sbjct: 1013 DFLTNALLFTPAFEGSSVALRVIPRRESIGTKVHIVHLEFRIAHPAPGIPEDLIQQMFHH 1072
Query: 1058 SRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
S+ +++EGLGL + +K++K+MNG VQY+RE++ F+I+ E P+
Sbjct: 1073 SQGVSREGLGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPL 1116
>gi|226234977|dbj|BAH47478.1| phytochrome E [Cardamine nipponica]
gi|226235027|dbj|BAH47479.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1269 bits (3285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1106 (56%), Positives = 811/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ L IG D RTLF+ SS L KA EI+LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 NNVKGL-IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IVIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYD
Sbjct: 181 IVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+AT
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATS 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ V+Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP A + GDA+CG+A A I+ +D+L WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLE+ KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++L+ AL+GEE+KNV +KLR FG N V V+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDE+ CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+A LTANK N EG+++G F FLQI S + L+ +E L EL Y+ QEIKN
Sbjct: 833 EASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNELTYMKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LETS ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++++SQVM++L+ERN QL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226234975|dbj|BAH47477.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1269 bits (3283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1106 (56%), Positives = 810/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ L IG D RTLF+ SS L KA EI+LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 NNVKGL-IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
IVIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCDTVVE V++LTGYD
Sbjct: 181 IVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+AT
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATS 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ V+Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP A + GDA+CG+A A I+ +D+L WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLE+ KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++L+ AL+GEE+KNV +KLR FG N V V+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDE+ CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+A LTANK N EG+++G F FLQI S + L+ +E L EL Y+ QEIKN
Sbjct: 833 EASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNELTYMKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LETS ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L ++++++SQVM++L+ERN QL ++ EEIKTL YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPFYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTREGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|226235033|dbj|BAH47482.1| phytochrome E [Cardamine resedifolia]
Length = 1116
Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1106 (56%), Positives = 809/1106 (73%), Gaps = 44/1106 (3%)
Query: 18 AQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS 77
+ SS SN++ +S AQY+VDA L A F+QS SGKSF+YS+SV + +
Sbjct: 5 SSSSAASNMKP---LGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNH 61
Query: 78 VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGL----APQSVPNL 133
V ++ I+AYLS IQRGG +QPFGC IAV+E +FR++ SEN E LGL +
Sbjct: 62 VSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEF 121
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ L IG D RTLF+ SS L KA EI+LLNP+ +HSK T KPFYAILHR+D G
Sbjct: 122 NNVKGL-IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAG 180
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
VIDLE A++ DPAL++AGAVQSQKLAVRAIS+LQSLPGGDI LCD VVE V++LTGYD
Sbjct: 181 TVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDAVVEDVQRLTGYD 240
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVMVY+FHED+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVRMI DC+ATP
Sbjct: 241 RVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATP 300
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVG 368
+ V+Q E L +PLCLV STLRAPH CH QYMANMGSIASLALA+++ G D VG
Sbjct: 301 VKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVG 360
Query: 369 GRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
+ R + AFGLQL MELQL SQL+EK +RTQTLLCDMLLRD+ +
Sbjct: 361 HHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSA 420
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG-DSTGLSTDSL 474
IVTQSP IMDLVKCDGAALYY+GK + +GVTP+E Q+KD+V WL+ HG DSTGL+TDSL
Sbjct: 421 IVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSL 480
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP A + GDA+CG+A A I+ +D+L WFRS+TA +KWGGAKHHP++KDD RMHP
Sbjct: 481 VDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHP 540
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEV KSRSLPW+ +E+DAIHSL+LI+R+SF ++S+ V++A +V+ +
Sbjct: 541 RSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSANVVE---RD 592
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+EL+S EMVR+IETATAPIF VD GC+NGWN K AE+TGL EAMGKSL +++V
Sbjct: 593 ANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQ 652
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR---KKAVFVVVNACSSKDYTNNIVG 711
+E +++ + AL+GEE+KNV +KLR FG N V V+VN+C+S+DYT I+G
Sbjct: 653 EESRAALESFMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIG 712
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQD+T +K + D+FI +QGDYK IV S NPLIPPIFASDE+ CCSEWN AMEKLTG
Sbjct: 713 VCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTG 772
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDT-EKFPFPLFDRNGKYV 830
WS+ ++IGKML GEVFG C++K D+LTKF+I+L+ D E F++ GKY+
Sbjct: 773 WSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYI 832
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+A LTANK N EG+++G F FLQI S + L+ +E L L YI QEIKN
Sbjct: 833 EASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA--QSLNGLTYIKQEIKN 888
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PLSG+ F + LLE+++++E Q++ LE+S ACEKQ+ II+ DL+SIE+G+L+ E EF
Sbjct: 889 PLSGIRFAHKLLESSEISETQRKFLESSDACEKQITTIIEGTDLKSIEEGNLKLETEEFR 948
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L +++++++SQVM++L+ERN QL ++ EEIKTL +YGD+ ++Q +LAD L N+V ++P
Sbjct: 949 LENILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQLILADLLCNIVNHAPF 1008
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHS-SRWMTQEGLGLS 1069
+ WV I++ P + + + +H +FRM PG+GLP E+V DMF + W+T +GLGL
Sbjct: 1009 PDSWVGINISPGHELARDNGRYIHLQFRMTHPGKGLPSEMVSDMFDTRDGWVTPDGLGLK 1068
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLI 1095
+ RK+L+ MNG V Y+RE ERC+FL+
Sbjct: 1069 LSRKLLEQMNGRVSYVREDERCFFLV 1094
>gi|73760088|dbj|BAE20162.1| phytochrome [Mougeotia scalaris]
gi|73760098|dbj|BAE20167.1| phytochrome [Mougeotia scalaris]
Length = 1124
Score = 1258 bits (3255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/1105 (57%), Positives = 800/1105 (72%), Gaps = 36/1105 (3%)
Query: 38 VSKAIAQYTVDARLHAVFE-QSGESGKSFDYSQSVRTM---SHSVPEQQISAYLSKIQRG 93
+ + Q + DA+L FE S G SFDY++SV + + + ++AYL ++QRG
Sbjct: 19 IQNRVTQASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRG 78
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQ FGC +AV+ TFR+IAYSEN EMLG+ PQSVP ++Q + IGTDVR+L + SS
Sbjct: 79 SIIQSFGCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDQQNAIGIGTDVRSLLSPSS 138
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP-ARTEDPALSIAG 212
++EKA A +++++NPI ++S T KPF+AILH DVG+VIDLEP + + D A+ AG
Sbjct: 139 VSVVEKAVAANDVSMMNPITVYSLATQKPFFAILHMNDVGLVIDLEPISSSSDSAMFSAG 198
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQS KLA +AIS+LQSLPGGDI LCD VVE VR+LTGYDRVM Y+FH+DEHGEVVAE
Sbjct: 199 AVQSHKLAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEI 258
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R DLEPY GLHYPATDIPQASRFLF +NR+RMI DC + + V+QD + Q + L GST
Sbjct: 259 RRSDLEPYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGST 318
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLWA-------------- 377
+R HGCH QYM NMGS ASL ++V IN +E A G G +LW
Sbjct: 319 MRGVHGCHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPF 378
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
FGLQLNME++LA+Q EKH+LRTQTLLCDMLLRD+P GIV+QSP++MD
Sbjct: 379 PIRSACEFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMD 438
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAAL + G+ + LG++PT+ Q+KDI WL++ H D+TGLSTDSL DAGYPKA L
Sbjct: 439 LVKCDGAALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKAREL 498
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
G VCGMA A IT+ DFLFWFR H KE+KW GAK + +DG RMHPRSSFKAFLEVV
Sbjct: 499 GVDVCGMAAARITENDFLFWFRGHAQKEVKWAGAKDGGSE-EDGSRMHPRSSFKAFLEVV 557
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPW++ EMDAIHSLQLILR SF+D E + +V+A+L ++ LQG++ELSSVA EM
Sbjct: 558 KQRSLPWEDVEMDAIHSLQLILRGSFQDIEDKEDRKIVHARLKEMHLQGMEELSSVASEM 617
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAPI AVD GCVNGWN K++ELTGLS+ E MGKSLV DL + ++ V+ LL
Sbjct: 618 VRLIETATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLL 677
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
+ AL GEE++NVEI+L+T+G + K V ++VNAC+S+D + +VGVCFV QDVT +K+V
Sbjct: 678 YMALNGEEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIV 737
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
DKF IQGDY IV S N LIPPIF SDE+ C EWN AME+L+G R + IGKML E
Sbjct: 738 QDKFTRIQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTRE 797
Query: 786 VFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQ 845
+FG RLK D LTKFMI L+ A DT+KFPF +DR+GK V+ LLT +KR N EG
Sbjct: 798 LFGGILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSEGV 857
Query: 846 IVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEAT 905
+ G FCFL AS ELQQALTVQ+ E+ + KELAYI QEI+NPL G+ F S +E T
Sbjct: 858 VTGVFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFMEHT 917
Query: 906 DLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMML 965
L+EDQKQL+ETSA CEKQ+ +I+ D+DL SIE G LE E EF + +V+N+VVSQ M+
Sbjct: 918 VLSEDQKQLIETSATCEKQLRRILADMDLASIEKGYLELETGEFSMATVMNSVVSQGMIQ 977
Query: 966 LRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQ 1025
++NLQL D P + K+L+V+GDQ R+QQVLADFLLN V+++P + GWVEI V P +K+
Sbjct: 978 STQKNLQLYCDTPPDFKSLSVFGDQVRLQQVLADFLLNAVQFTPPS-GWVEIKVEPVVKK 1036
Query: 1026 SSEGQTIVHNEFRMVCPGEGLPPELVQDMFH--SSRWMTQEGLGLSMCRKILKLMNGEVQ 1083
G ++ +FR+ PGEGLP +L+ MF +R +QEGLGLS+CRK+++LMNGEVQ
Sbjct: 1037 LPGGVSVAKLDFRVSHPGEGLPEDLIDQMFDRADARVKSQEGLGLSICRKLVRLMNGEVQ 1096
Query: 1084 YIRESERCYFLIIFELPMPRRGSKS 1108
Y RE ER +FL+ ELP+ +R ++
Sbjct: 1097 YRREGERNFFLLQLELPLAQRDDQA 1121
>gi|2507185|sp|P33529.2|PHY_MOUSC RecName: Full=Phytochrome
gi|1419681|emb|CAA64796.1| phytochrome [Mougeotia scalaris]
Length = 1124
Score = 1254 bits (3244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/1105 (57%), Positives = 799/1105 (72%), Gaps = 36/1105 (3%)
Query: 38 VSKAIAQYTVDARLHAVFE-QSGESGKSFDYSQSVRTM---SHSVPEQQISAYLSKIQRG 93
+ + Q + DA+L FE S G SFDY++SV + + + ++AYL ++QRG
Sbjct: 19 IQNRVTQASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRG 78
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQ FGC +AV+ TFR+IAYSEN EMLG+ PQSVP + Q + IGTDVR+L + SS
Sbjct: 79 SIIQSFGCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDHQNAIGIGTDVRSLLSPSS 138
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP-ARTEDPALSIAG 212
++EKA A +++++NPI ++S T K F+AILH DVG+VIDLEP + + D A+ AG
Sbjct: 139 VSVVEKAVAANDVSMMNPIAVYSLATQKLFFAILHMNDVGLVIDLEPISSSSDSAMFSAG 198
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
AVQS KLA +AIS+LQSLPGGDI LCD VVE VR+LTGYDRVM Y+FH+DEHGEVVAE
Sbjct: 199 AVQSHKLAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEI 258
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R DLEPY GLHYPATDIPQASRFLF +NR+RMI DC + + V+QD + Q + L GST
Sbjct: 259 RRSDLEPYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGST 318
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLWA-------------- 377
+R HGCH QYM NMGS ASL ++V IN +E A G G +LW
Sbjct: 319 MRGVHGCHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPF 378
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
FGLQLNME++LA+Q EKH+LRTQTLLCDMLLRD+P GIV+QSP++MD
Sbjct: 379 PIRSACEFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMD 438
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAAL + G+ + LG++PT+ Q+KDI WL++ H D+TGLSTDSL DAGYPKA L
Sbjct: 439 LVKCDGAALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKAREL 498
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
G VCGMA A IT+ DFLFWFR H KE+KW GAK + +DG RMHPRSSFKAFLEVV
Sbjct: 499 GVDVCGMAAARITENDFLFWFRGHAQKEVKWAGAKDGGSE-EDGSRMHPRSSFKAFLEVV 557
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPW++ EMDAIHSLQLILR SF+D E + +V+A+L ++ LQG++ELSSVA EM
Sbjct: 558 KQRSLPWEDVEMDAIHSLQLILRGSFQDIEDKEDRKIVHARLKEMHLQGMEELSSVASEM 617
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAPI AVD GCVNGWN K++ELTGLS+ E MGKSLV DL + ++ V+ LL
Sbjct: 618 VRLIETATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLL 677
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
+ AL GEE++NVEI+L+T+G + K V ++VNAC+S+D + +VGVCFV QDVT +K+V
Sbjct: 678 YMALNGEEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIV 737
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
DKF IQGDY IV S N LIPPIF SDE+ C EWN AME+L+G R + IGKML E
Sbjct: 738 QDKFTRIQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTRE 797
Query: 786 VFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQ 845
+FG RLK D LTKFMI L+ A DT+KFPF +DR+GK V+ LLT +KR N EG
Sbjct: 798 LFGGILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSEGV 857
Query: 846 IVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEAT 905
+ G FCFL AS ELQQALTVQ+ E+ + KELAYI QEI+NPL G+ F S +E T
Sbjct: 858 VTGVFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFMEHT 917
Query: 906 DLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMML 965
L+EDQKQL+ETSA CEKQ+ +I+ D+DL SIE G LE E EF + +V+N+VVSQ M+
Sbjct: 918 VLSEDQKQLIETSATCEKQLRRILADMDLASIEKGYLELETGEFSMATVMNSVVSQGMIQ 977
Query: 966 LRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQ 1025
++NLQL D P + K+L+V+GDQ R+QQVLADFLLN V+++P + GWVEI V P +K+
Sbjct: 978 STQKNLQLYCDTPPDFKSLSVFGDQVRLQQVLADFLLNAVQFTPPS-GWVEIKVEPVVKK 1036
Query: 1026 SSEGQTIVHNEFRMVCPGEGLPPELVQDMFH--SSRWMTQEGLGLSMCRKILKLMNGEVQ 1083
G ++ + +FR+ PGEGLP +L+ MF +R +QEGLGLS+CRK+++LMNGEVQ
Sbjct: 1037 LPGGVSVANVDFRVSHPGEGLPEDLIDQMFDRADARVKSQEGLGLSICRKLVRLMNGEVQ 1096
Query: 1084 YIRESERCYFLIIFELPMPRRGSKS 1108
Y RE ER +FL+ ELP+ +R ++
Sbjct: 1097 YRREGERNFFLLQLELPLAQRDDQA 1121
>gi|77963994|gb|ABB13338.1| phytochrome B [Hordeum vulgare subsp. spontaneum]
Length = 753
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/732 (79%), Positives = 651/732 (88%), Gaps = 4/732 (0%)
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAAL+Y
Sbjct: 15 AFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALFY 74
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
GKYYPLGVTPTE QIKDI+EWL HGDSTGLSTDSLADAGYP A LGDAVCGMAVAY
Sbjct: 75 HGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGATALGDAVCGMAVAY 134
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAE
Sbjct: 135 ITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAE 194
Query: 557 MDAIHSLQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETA 612
MDAIHSLQLILRDSFRDA SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETA
Sbjct: 195 MDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETA 254
Query: 613 TAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGE 672
T PIFAVD +GC+NGWNAKVAELTGL+VEEAMGKSL+ DL++KE EEIV+ LL AL+GE
Sbjct: 255 TVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKESEEIVEKLLSQALRGE 314
Query: 673 EDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHI 732
E NVEIKL+TFG+E K +FV+VNACSS+DYT NIVGVCFVGQD+T QK+VMDKF++I
Sbjct: 315 EGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDITGQKVVMDKFVNI 374
Query: 733 QGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCR 792
QGDYKAIVH+PNPLIPPIFASDEN CCSEWNTAME LTGWSRG+++GK+LVGEVFG+CCR
Sbjct: 375 QGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTGWSRGEVVGKLLVGEVFGNCCR 434
Query: 793 LKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCF 852
LKGPDALTKFMIALHNA GGQD+EK PF FD+NGKYVQALLTAN R M+G+ +GAFCF
Sbjct: 435 LKGPDALTKFMIALHNAIGGQDSEKSPFSFFDKNGKYVQALLTANTRSKMDGETIGAFCF 494
Query: 853 LQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQK 912
LQIASPELQQA +QRQQEKKC+AR+KELAYICQEIKNPLSG+ FTNSLLE TDL +DQ+
Sbjct: 495 LQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSLLEMTDLKDDQR 554
Query: 913 QLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQ 972
Q LETSAACEKQM KI+KD L+SIEDGSL EK E LG+V+NAVVSQVM+LLRER+LQ
Sbjct: 555 QFLETSAACEKQMSKIVKDASLQSIEDGSLVLEKGEISLGNVMNAVVSQVMILLRERDLQ 614
Query: 973 LIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI 1032
LIRDIP+EIK + YGDQ RIQQVL+DFLL+MVR++P+ GWVEI VRP +KQ+S+G
Sbjct: 615 LIRDIPDEIKEASAYGDQYRIQQVLSDFLLSMVRFAPTENGWVEIQVRPNVKQNSDGTET 674
Query: 1033 VHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCY 1092
+ FR CPGEGLPP++VQDMF ++RW TQEG+GLS+CRKILKLM GEVQYIRESER +
Sbjct: 675 MLFLFRFACPGEGLPPDIVQDMFSNARWTTQEGIGLSVCRKILKLMGGEVQYIRESERSF 734
Query: 1093 FLIIFELPMPRR 1104
FLI+ ELP PRR
Sbjct: 735 FLIVLELPQPRR 746
>gi|3724336|dbj|BAA33774.1| phytochrome 2 [Adiantum capillus-veneris]
Length = 973
Score = 1247 bits (3227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/941 (63%), Positives = 736/941 (78%), Gaps = 45/941 (4%)
Query: 42 IAQYTVDARLHAVFEQS---GESG-KSFDYSQSVR-----TMSHSVPEQQISAYLSKIQR 92
+AQ T DA+LHAVFEQ+ G++G SFDY +S+ +S VP Q ++AYL ++QR
Sbjct: 33 VAQTTADAKLHAVFEQAQSEGDTGGSSFDYMRSIEDARGSVLSERVPAQAVTAYLQRMQR 92
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE-ILTIGTDVRTLFTS 151
GG IQPFGC +A++E +FRVIAYSENA EML L PQSVP++ Q +L IGTD RTLFT
Sbjct: 93 GGLIQPFGCMLALEEGSFRVIAYSENAAEMLDLMPQSVPSVGVQVLVLGIGTDARTLFTY 152
Query: 152 SSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPAL-SI 210
+S+ LEKA GA ++++LNPI +H +++ KPF AI+HR+DVG+VID EP R D A+ +
Sbjct: 153 ASAAALEKASGAVDVSMLNPITVHCRSSSKPFNAIVHRIDVGLVIDFEPVRPADVAVWAA 212
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
AGA+QS KLA +AIS+LQ+LP GDI LLCD+VVE VR+LTGYDRVM Y+FHEDEHGEV+A
Sbjct: 213 AGALQSHKLAAKAISRLQALPVGDIDLLCDSVVEEVRELTGYDRVMAYKFHEDEHGEVLA 272
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
E +R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC A P+ VIQD+ L QPL L G
Sbjct: 273 EIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRALPVRVIQDKELRQPLSLAG 332
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRS----TTRLWA--------- 377
STLRAPHGCH+QYMANMGSIASL +AV++N NDE+ V RS RLW
Sbjct: 333 STLRAPHGCHSQYMANMGSIASLVMAVVVNDNDED-VSNRSQQPKMRRLWGLVVCHHTTP 391
Query: 378 -----------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQS 420
FGLQLNMEL+LA+Q+ EKH+LRTQTLLCDMLLRD+P GIV++S
Sbjct: 392 RAVPFALRSACEFLMQVFGLQLNMELELAAQMREKHILRTQTLLCDMLLRDAPIGIVSES 451
Query: 421 PSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYP 480
P+IMDLVKCDGAALYY ++ LG TP E QIKD+ EWLL H DSTGLSTDSLADAGYP
Sbjct: 452 PNIMDLVKCDGAALYYGKNFWLLGTTPIEAQIKDLAEWLLDVHRDSTGLSTDSLADAGYP 511
Query: 481 KAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 540
AA LGDAVCGMA A IT RDFLFWFRSHTAKEIKWGGAKH PED+DDG++MHPRSSFKA
Sbjct: 512 GAAALGDAVCGMAAAKITTRDFLFWFRSHTAKEIKWGGAKHDPEDRDDGRKMHPRSSFKA 571
Query: 541 FLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSS 600
FLEVVK RSLPW++ EMDAIHSLQLILR SF+D + S++K +++A+L DL+L G+DELS+
Sbjct: 572 FLEVVKRRSLPWEDMEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHGMDELST 631
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
VA EMVRLIETATAPIFAVD G +NGWNAKVAELTGL+VEEAM +SLV D+V E
Sbjct: 632 VANEMVRLIETATAPIFAVDAGGFINGWNAKVAELTGLTVEEAMSRSLVRDVVVNASMET 691
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVT 720
+ +L AL+G+E++NVEIKL+T+G + K V ++VNACSS+D+T+N+VGVCFVGQDVT
Sbjct: 692 AERVLDLALQGQEEQNVEIKLKTYGDQAIKGPVILIVNACSSRDFTDNVVGVCFVGQDVT 751
Query: 721 DQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGK 780
QK+VMDKF IQGDYK IV +PNPLIPPIF +DE CSEWN AMEK +GW R D+IGK
Sbjct: 752 GQKVVMDKFTRIQGDYKTIVQNPNPLIPPIFGADEFGYCSEWNPAMEKFSGWKREDVIGK 811
Query: 781 MLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
ML+GEVFGS CC+L+G D++TKFMI L+ A GG+D+++FPF FDR GKY +ALL AN
Sbjct: 812 MLIGEVFGSDLACCKLRGQDSMTKFMIILNAAMGGRDSDRFPFGFFDRYGKYAEALLIAN 871
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
KR + +G I G FCFL ASPELQQAL VQ++ + RLKE+AY+ QEI+NPL G+ F
Sbjct: 872 KRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTALDRLKEVAYMKQEIRNPLYGIVF 931
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
T LL+ T+LT++QKQ++ETS+ CEKQ+ I+ + + E ++
Sbjct: 932 TRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNFEKLD 972
>gi|170287|gb|AAA34093.1| phytochrome B, partial [Nicotiana tabacum]
Length = 677
Score = 1242 bits (3213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/676 (86%), Positives = 635/676 (93%)
Query: 434 LYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMA 493
LY QGKYYPLGVTPTE QIKDIVEWLLTYHGDSTGLSTDSLADAGYP AA+LGDAVCGMA
Sbjct: 1 LYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGLSTDSLADAGYPGAASLGDAVCGMA 60
Query: 494 VAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWD 553
VAYIT +DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+
Sbjct: 61 VAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWE 120
Query: 554 NAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETAT 613
NAEMDAIHSLQLILRDSF+DAEASNSKAVV+AQL ++ELQG+DELSSVAREMVRLIETAT
Sbjct: 121 NAEMDAIHSLQLILRDSFKDAEASNSKAVVHAQLGEMELQGIDELSSVAREMVRLIETAT 180
Query: 614 APIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEE 673
APIFAVDV G +NGWNAKVAELT LSVEEAMGKSLVHDLV+KE +E + LL +AL+GEE
Sbjct: 181 APIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSLVHDLVHKESQETAEKLLFNALRGEE 240
Query: 674 DKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQ 733
DKNVEIKLRTFG E KKAVFVVVNACSSKDYTNNIVGVCFVGQDVT QK+VMDKFIHIQ
Sbjct: 241 DKNVEIKLRTFGPEQLKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQ 300
Query: 734 GDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRL 793
GDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+IIGKMLVGE+FGSCCRL
Sbjct: 301 GDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEIIGKMLVGEIFGSCCRL 360
Query: 794 KGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFL 853
KGPDA+TKFMI LHNA G QDT+KFPF FDRNGKYVQALLTANKRVNMEGQI+GAFCF+
Sbjct: 361 KGPDAMTKFMIVLHNAIGVQDTDKFPFSFFDRNGKYVQALLTANKRVNMEGQIIGAFCFI 420
Query: 854 QIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQ 913
QIASPELQQAL VQRQQEKKC++++KELAY+CQEIK+PL+G+ FTNSLLEATDLTE+QKQ
Sbjct: 421 QIASPELQQALRVQRQQEKKCYSQMKELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQ 480
Query: 914 LLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQL 973
LETSAACE+QM KII+DVDLE+IEDGSL EK EF LGSVI+AVVSQVM+LLRER++QL
Sbjct: 481 YLETSAACERQMSKIIRDVDLENIEDGSLTLEKEEFFLGSVIDAVVSQVMLLLRERSVQL 540
Query: 974 IRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIV 1033
IRDIPEEIKTL V+GDQ RIQQVLADFLLNMVRY+PS +GWVEI ++P +KQ S+ T+V
Sbjct: 541 IRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVRYAPSPDGWVEIQLQPNMKQISDEVTVV 600
Query: 1034 HNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYF 1093
H EFR+VCPGEGLPPELVQDMFHSSRW+T+EGLGLSMCRKILKLMNG++QYIRESERCYF
Sbjct: 601 HIEFRIVCPGEGLPPELVQDMFHSSRWVTKEGLGLSMCRKILKLMNGDIQYIRESERCYF 660
Query: 1094 LIIFELPMPRRGSKSI 1109
LII +LPM RRGSKS+
Sbjct: 661 LIILDLPMTRRGSKSL 676
>gi|6671484|gb|AAC49301.2| phytochrome F [Solanum lycopersicum]
Length = 1118
Score = 1222 bits (3162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/1093 (54%), Positives = 773/1093 (70%), Gaps = 38/1093 (3%)
Query: 41 AIAQYTVDARLHAVFEQSGESGKSFDYSQSVR--TMSHSVPEQQISAYLSKIQRGGHIQP 98
IAQ VDA+LH FE ES + FDYS SV + +VP +S YL K+QRG IQP
Sbjct: 26 VIAQTPVDAKLHVEFE---ESEQQFDYSSSVNLSNSTSNVPSSTVSDYLQKMQRGSLIQP 82
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC IA+D F VIAYSENA EML L P +VP++E+QE LT GTDVR LF SS + LE
Sbjct: 83 FGCMIAIDAQNFAVIAYSENAPEMLDLTPHAVPSIEQQEALTFGTDVRKLFRSSGASALE 142
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
KA E++LLNPI +H KN+GKPFYAILHR++VG+VIDLEP + ++ AGA++S K
Sbjct: 143 KAVSFGELSLLNPILVHCKNSGKPFYAILHRIEVGLVIDLEPVDPHEVPVTTAGAIKSYK 202
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
LA +AI +LQSLP GDI LLCD +V V LTGYDRVMVY+FHEDEHGEVVAE + P+LE
Sbjct: 203 LAAKAIRKLQSLPSGDISLLCDVLVREVSHLTGYDRVMVYKFHEDEHGEVVAECRTPELE 262
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQASRFLF +N+VRMI DC A P+ VIQD L Q L L GSTLRAPHG
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPIRVIQDPRLAQSLSLGGSTLRAPHG 322
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-LWA-------------------- 377
CHAQYM NMG++AS+A++V+IN D+E + R LW
Sbjct: 323 CHAQYMTNMGTVASMAMSVMINEQDDELDSDQQVGRKLWGLVVCHHTCPRFLSFPLRYAS 382
Query: 378 ------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDG 431
F +Q+N E+++A+QL EK +L+ QT+LCDMLLRD+P GIVTQSP++MDLVKCDG
Sbjct: 383 EFLLQVFSVQVNKEVEMAAQLKEKQILQIQTVLCDMLLRDAPMGIVTQSPNVMDLVKCDG 442
Query: 432 AALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCG 491
AALYY+ K + GVTP E+QI+DI EWL HGDSTGL+TDSL +AG+P A+ LGDAVCG
Sbjct: 443 AALYYRNKLWLHGVTPAESQIRDIAEWLNESHGDSTGLNTDSLMEAGFPGASVLGDAVCG 502
Query: 492 MAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP 551
MA IT +DFLFWFRSHTAKEIKWGGAKH P DKDDG++MHPRSSFKAFLEVVK RSLP
Sbjct: 503 MAAVKITSKDFLFWFRSHTAKEIKWGGAKHLPGDKDDGRKMHPRSSFKAFLEVVKRRSLP 562
Query: 552 WDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIET 611
W++ EMDAIHSLQLILR S +D A SK +VN VD + VD L +MVRL+ET
Sbjct: 563 WEDVEMDAIHSLQLILRGSLQDEAADCSKMIVNVPAVDTIIDRVDTLH--INDMVRLVET 620
Query: 612 ATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
A+ P+ AVD G +NGWN+KV+ELTGL VE +G LV DLV + +L AL+G
Sbjct: 621 ASMPVLAVDTSGRINGWNSKVSELTGLPVENVIGVPLV-DLVIGGTTNTIKRVLSLALQG 679
Query: 672 EEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIH 731
+E+KNVEIKLRT G + + ++ +VVNAC S+D+ NIVGVCF G+DVT KL+ DK+
Sbjct: 680 KEEKNVEIKLRTLGPQEKVGSISIVVNACCSRDFKQNIVGVCFTGKDVTGLKLIKDKYSR 739
Query: 732 IQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF---G 788
+QGDY I+HSP+PLIPPIF DE C EWN AM KLTG R ++I +ML+GEVF
Sbjct: 740 VQGDYVGIIHSPSPLIPPIFVMDEQGRCVEWNDAMHKLTGSKREEVIDQMLLGEVFTVNS 799
Query: 789 SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVG 848
CR+K D LT+ I L+ G + EK F LF++ KY++AL++ANK+V+ +G++ G
Sbjct: 800 FGCRVKDQDTLTQLTILLNRVIAGGEGEKLFFGLFNKQDKYIEALISANKKVDDDGRVTG 859
Query: 849 AFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLT 908
CFL + SPELQ A+ VQ+ E+ LK+LAY+ E+KNPL+G++ +LL+++DL+
Sbjct: 860 VLCFLHVPSPELQYAMHVQKLSEQAAKNSLKKLAYVRLELKNPLNGINCIQNLLKSSDLS 919
Query: 909 EDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRE 968
+DQ+QLL+TS C+KQ+ KII D D+ESIE+ E EF LG V+ V++QVM+L +E
Sbjct: 920 KDQRQLLKTSTMCQKQLAKIIDDTDIESIEECYTEMNSCEFNLGEVVTVVINQVMILSQE 979
Query: 969 RNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSE 1028
R +Q+ D P E+ L + GD R+QQVL+DFL + ++P + V V P ++
Sbjct: 980 RKVQVTWDSPVEVSQLYLIGDNLRLQQVLSDFLTTAILFTPFEDSSVHFRVIPRKERIGT 1039
Query: 1029 GQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRES 1088
I+H EFR+ P G+P +L+Q MFH SR +++EG GL + +K++K+M+G VQY+RE+
Sbjct: 1040 KMYIMHLEFRITHPSPGIPDDLIQHMFHYSRSISREGFGLYISQKLVKIMDGTVQYLREA 1099
Query: 1089 ERCYFLIIFELPM 1101
+R F+I+ E P+
Sbjct: 1100 DRSSFIILVEFPL 1112
>gi|327342194|gb|AEA50884.1| phyB1 [Populus tremula]
Length = 695
Score = 1212 bits (3136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/690 (85%), Positives = 622/690 (90%), Gaps = 34/690 (4%)
Query: 7 HQQQHRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFD 66
HQ Q AAQSSGTSN+R HH+ATES VSKAIAQYTVDA+LHAVFEQSG SGKSFD
Sbjct: 14 HQNQ------AAQSSGTSNMRQHHHATES--VSKAIAQYTVDAQLHAVFEQSGGSGKSFD 65
Query: 67 YSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLA 126
YSQSVRT S SVPE+QI+AYLSKIQRGGHIQPFGC IAVDE +FRVIAYSENA EMLG
Sbjct: 66 YSQSVRTTSQSVPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGFT 125
Query: 127 PQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAI 186
PQSVP+L+KQEIL+ GTDVRTLF SSS +LEKAFGAREITLLNPIWIHSKN+GKPFYAI
Sbjct: 126 PQSVPSLDKQEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAI 185
Query: 187 LHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESV 246
LHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVR+ISQLQSLPGGDIKLLCDTVVESV
Sbjct: 186 LHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESV 245
Query: 247 RQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMI 306
R+LTGYDRVMVY+FHEDEHGEVVAE+KR DLEPY GLHYP+TDIPQASRFLFKQNRVRMI
Sbjct: 246 RELTGYDRVMVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMI 305
Query: 307 VDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA 366
VDCHATP+ VIQDE LMQPLCLVGSTLRAPHGCHAQYMANMGSIAS+A+AVIINGN+EEA
Sbjct: 306 VDCHATPVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASMAMAVIINGNEEEA 365
Query: 367 VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVLRT 400
+GGR++TRLW AFGLQLNMELQLASQLSEKHVLRT
Sbjct: 366 IGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRT 425
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAALYYQG+YYP GVTPTE QIKDIVEWLL
Sbjct: 426 QTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPSGVTPTEAQIKDIVEWLL 485
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
HGDSTGLSTDSLADAGYP AA+LG+AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK
Sbjct: 486 ALHGDSTGLSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 545
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHPEDKDDGQRMHPRSSFKAFLEVVKSRSL W+NAEMDAIHSLQLILRDSFRDAEA+NSK
Sbjct: 546 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDAEATNSK 605
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
AVV QL D ELQG+DELSSVAREMVRLIETATAPIFAVDV GC+NGWNAKVAELTGLSV
Sbjct: 606 AVVRTQLEDTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSV 665
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
E AMGKSLVHDLVYKEYEE VD LLH AL+
Sbjct: 666 ERAMGKSLVHDLVYKEYEETVDKLLHRALR 695
>gi|115455391|ref|NP_001051296.1| Os03g0752100 [Oryza sativa Japonica Group]
gi|122246759|sp|Q10CQ8.1|PHYC_ORYSJ RecName: Full=Phytochrome C
gi|21070927|gb|AAM34402.1|AF377947_8 phytochrome C [Oryza sativa Japonica Group]
gi|4190974|dbj|BAA74448.1| phytochrome C [Oryza sativa Japonica Group]
gi|31712054|gb|AAP68360.1| phytochrome C [Oryza sativa Japonica Group]
gi|40538982|gb|AAR87239.1| phytochrome C [Oryza sativa Japonica Group]
gi|108711120|gb|ABF98915.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
gi|113549767|dbj|BAF13210.1| Os03g0752100 [Oryza sativa Japonica Group]
gi|125587941|gb|EAZ28605.1| hypothetical protein OsJ_12592 [Oryza sativa Japonica Group]
Length = 1137
Score = 1209 bits (3127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/1138 (52%), Positives = 791/1138 (69%), Gaps = 57/1138 (5%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + A S +S+ R+ H+A + +AQ +DA+LHA FE S + FDYS SV
Sbjct: 5 RSNNRATCSRSSSARSKHSA-------RVVAQTPMDAQLHAEFEGSQ---RHFDYSSSVG 54
Query: 73 TMSHS-VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVP 131
+ S +SAYL +QRG +QPFGC +AV TF ++AYSENA EML L P +VP
Sbjct: 55 AANRSGATTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVP 114
Query: 132 NLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVD 191
++++E L +GTDVRTLF S S V L+KA ++ LLNPI +H++ +GKPFYAI+HR+D
Sbjct: 115 TIDQREALAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRID 174
Query: 192 VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTG 251
VG+VIDLEP D ++ GA++S KLA RAI++LQSLP G++ LLCD +V V +LTG
Sbjct: 175 VGLVIDLEPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTG 234
Query: 252 YDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHA 311
YDRVM Y+FHEDEHGEV+AE KR DLEPY GLHYPATDIPQASRFLF +N+VRMI DC A
Sbjct: 235 YDRVMAYKFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSA 294
Query: 312 TPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GND 363
TP+ +IQD+ L QP+ + GSTLRAPHGCHAQYMA+MGS+ASL ++V IN
Sbjct: 295 TPVKIIQDDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGS 354
Query: 364 EEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKHV 397
++ GR +LW FG+Q+N E++LA+Q E+H+
Sbjct: 355 DQQPKGR---KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHI 411
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDMLLRD+P GI TQSP++MDLVKCDGAALYYQ + + LG TP+E +IK+IV
Sbjct: 412 LRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVA 471
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WL YH STGLSTDSL +AGYP AA LGD VCGMA I+ +DF+FWFRSHTAKEIKWG
Sbjct: 472 WLQEYHDGSTGLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWG 531
Query: 518 GAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GAKH P D DD G++MHPRSSFKAFLEVVK RS+PW++ EMDAIHSLQLILR S +D +A
Sbjct: 532 GAKHEPIDADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDA 591
Query: 577 ---SNSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+N+K++V A D+ ++QG+ EL +V EMVRLIETATAPI AVD+ G +NGWN K
Sbjct: 592 NKNNNAKSIVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKA 651
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGL V EA+GK LV DLV + E+V +L+ AL+G E++N++IKL+TF +
Sbjct: 652 AELTGLPVMEAIGKPLV-DLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGP 710
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
V ++VNAC S+D + +VGVCFV QD+T Q ++MDK+ IQGDY AIV +P+ LIPPIF
Sbjct: 711 VILMVNACCSRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFM 770
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNA 809
++ C EWN AM+K+TG R D + K+L+GEVF CR+K LTK I ++
Sbjct: 771 INDLGSCLEWNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTV 830
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQD EK F F+ +GKY+++L+TA KR + EG+I GA CFL +ASPELQ AL VQ+
Sbjct: 831 ISGQDPEKLLFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKM 890
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKII 929
E+ KEL YI QE++NPL+G+ FT +LLE +DLTE+Q++LL ++ C++Q+ KI+
Sbjct: 891 SEQAAMNSFKELTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKIL 950
Query: 930 KDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGD 989
D DLESIE E +F L +N V+ Q M +E+ + + RD P E+ + + GD
Sbjct: 951 HDTDLESIEQCYTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGD 1010
Query: 990 QARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPE 1049
R+QQVLADFL M++++ AEG + + V P ++ G I H EFR+V P G+P
Sbjct: 1011 NLRLQQVLADFLACMLQFTQPAEGPIVLQVIPRMENIGSGMQIAHLEFRLVHPAPGVPEA 1070
Query: 1050 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
L+Q+MF S ++EGLGL + +K++K M+G VQY+RESE F+++ E P+ + +K
Sbjct: 1071 LIQEMFRHSPGASREGLGLYISQKLVKTMSGTVQYLRESESSSFIVLVEFPVAQLSTK 1128
>gi|7672696|gb|AAF66603.1|AF141942_1 phytochrome C [Oryza sativa Indica Group]
Length = 1137
Score = 1205 bits (3118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1138 (52%), Positives = 790/1138 (69%), Gaps = 57/1138 (5%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + A S +S+ R+ H+A + +AQ +DA+LHA FE S + FDYS SV
Sbjct: 5 RSNNRATCSRSSSARSKHSA-------RVVAQTPMDAQLHAEFEGSQ---RHFDYSSSVG 54
Query: 73 TMSHS-VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVP 131
+ S +SAYL +QRG +QPFGC +AV TF ++AYSENA EML L P +VP
Sbjct: 55 AANRSGATTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVP 114
Query: 132 NLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVD 191
++++E L +GTDVRTLF S S V L+KA ++ LLNPI +H++ +GKPFYAI+HR+D
Sbjct: 115 TIDQREALAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRID 174
Query: 192 VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTG 251
VG+VIDLEP D ++ GA++S KLA RAI++LQSLP G++ LLCD +V V +LTG
Sbjct: 175 VGLVIDLEPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTG 234
Query: 252 YDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHA 311
YDRVM Y+FHEDEHGEV+AE KR DLEPY GLHYPATDIPQASRFLF +N+VRMI DC A
Sbjct: 235 YDRVMAYKFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSA 294
Query: 312 TPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GND 363
TP+ +IQD+ L QP+ + GSTLRAPHGCHAQYMA+MGS+ASL ++V IN
Sbjct: 295 TPVKIIQDDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGS 354
Query: 364 EEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKHV 397
++ GR +LW FG+Q+N E++LA+Q E+H+
Sbjct: 355 DQQPKGR---KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHI 411
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDMLLRD+P GI TQSP++MDLVKCDGAALYYQ + + LG TP+E +IK+IV
Sbjct: 412 LRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVA 471
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WL YH STGLSTDSL +AGYP AA LGD VCGMA I+ +DF+FWFRSHTAKEIKWG
Sbjct: 472 WLQEYHDGSTGLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWG 531
Query: 518 GAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GAKH P D DD G++MHPRSSFKAFLEVVK RS+PW++ EMDAIHSLQLILR S +D +A
Sbjct: 532 GAKHEPIDADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDA 591
Query: 577 ---SNSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+N+K++V A D+ ++QG+ EL +V EMVRLIETATAPI AVD+ G +NGWN K
Sbjct: 592 NKNNNAKSIVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKA 651
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGL V EA+GK LV DLV + E+V +L+ AL+G E++N++IKL+TF +
Sbjct: 652 AELTGLPVMEAIGKPLV-DLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGP 710
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
V ++VNAC S+D + +VGVCFV QD+T Q ++MDK+ IQGDY AIV +P+ LIPPIF
Sbjct: 711 VILMVNACCSRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFM 770
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNA 809
++ C EWN AM+K+TG R D + K+L+GEVF CR+K LTK I ++
Sbjct: 771 INDLGSCLEWNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTV 830
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQD EK F F+ +GKY+++L+TA KR + EG+I GA CFL +ASPELQ AL VQ+
Sbjct: 831 ISGQDPEKLLFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKM 890
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKII 929
E+ KEL YI QE++NPL+G+ FT +LLE +DLTE+Q++LL ++ C++Q+ KI+
Sbjct: 891 SEQAAMNSFKELTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKIL 950
Query: 930 KDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGD 989
D DLESIE E +F L +N V+ Q M +E+ + + RD P E+ + + GD
Sbjct: 951 HDTDLESIEQCYTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGD 1010
Query: 990 QARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPE 1049
R+QQVLADFL ++++ AEG + + V P ++ G I H EFR+V P G+P
Sbjct: 1011 NLRLQQVLADFLACTLQFTQPAEGPIVLQVIPRMENIGSGMQIAHLEFRLVHPAPGVPEA 1070
Query: 1050 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
L+Q+MF S ++EGLGL + +K++K M+G VQY+RE+E F+++ E P+ + +K
Sbjct: 1071 LIQEMFRHSPGASREGLGLYISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQLSTK 1128
>gi|158513185|sp|A2XM23.2|PHYC_ORYSI RecName: Full=Phytochrome C
Length = 1137
Score = 1204 bits (3115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1138 (52%), Positives = 790/1138 (69%), Gaps = 57/1138 (5%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + A S +S+ R+ H+A + +AQ +DA+LHA FE S + FDYS SV
Sbjct: 5 RSNNRATCSRSSSARSKHSA-------RVVAQTPMDAQLHAEFEGSQ---RHFDYSSSVG 54
Query: 73 TMSHS-VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVP 131
+ S +SAYL +QRG +QPFGC +AV TF ++AYSENA EML L P +VP
Sbjct: 55 AANRSGATTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVP 114
Query: 132 NLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVD 191
++++E L +GTDVRTLF S S V L+KA ++ LLNPI +H++ +GKPFYAI+HR+D
Sbjct: 115 TIDQREALAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRID 174
Query: 192 VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTG 251
VG+VIDLEP D ++ GA++S KLA RAI++LQSLP G++ LLCD +V V +LTG
Sbjct: 175 VGLVIDLEPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTG 234
Query: 252 YDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHA 311
YDRVM Y+FHEDEHGEV+AE KR DLEPY GLHYPATDIPQASRFLF +N+VRMI DC A
Sbjct: 235 YDRVMAYKFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSA 294
Query: 312 TPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GND 363
TP+ +IQD+ L QP+ + GSTLRAPHGCHAQYMA+MGS+ASL ++V IN
Sbjct: 295 TPVKIIQDDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGS 354
Query: 364 EEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKHV 397
++ GR +LW FG+Q+N E++LA+Q E+H+
Sbjct: 355 DQQPKGR---KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHI 411
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDMLLRD+P GI TQSP++MDLVKCDGAALYYQ + + LG TP+E +IK+IV
Sbjct: 412 LRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVA 471
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WL YH STGLSTDSL +AGYP AA LGD V GMA I+ +DF+FWFRSHTAKEIKWG
Sbjct: 472 WLQEYHDGSTGLSTDSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWG 531
Query: 518 GAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GAKH P D DD G++MHPRSSFKAFLEVVK RS+PW++ EMDAIHSLQLILR S +D +A
Sbjct: 532 GAKHEPIDADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDA 591
Query: 577 ---SNSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+N+K++V A D+ ++QG+ EL +V EMVRLIETATAPI AVD+ G +NGWN K
Sbjct: 592 NKNNNAKSIVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKA 651
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGL V EA+GK LV DLV + E+V +L+ AL+G E++N++IKL+TF +
Sbjct: 652 AELTGLPVMEAIGKPLV-DLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGP 710
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
V ++VNAC S+D + +VGVCFV QD+T Q ++MDK+ IQGDY AIV +P+ LIPPIF
Sbjct: 711 VILMVNACCSRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFM 770
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNA 809
++ C EWN AM+K+TG R D + K+L+GEVF CR+K LTK I ++
Sbjct: 771 INDLGSCLEWNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTV 830
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQD EK F F+ +GKY+++L+TA KR + EG+I GA CFL +ASPELQ AL VQ+
Sbjct: 831 ISGQDPEKLLFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKM 890
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKII 929
E+ KEL YI QE++NPL+G+ FT +LLE +DLTE+Q++LL ++ C++Q+ KI+
Sbjct: 891 SEQAAMNSFKELTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKIL 950
Query: 930 KDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGD 989
D DLESIE E +F L +N V+ Q M +E+ + + RD P E+ + + GD
Sbjct: 951 HDTDLESIEQCYTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGD 1010
Query: 990 QARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPE 1049
R+QQVLADFL M++++ AEG + + V P ++ G I H EFR+V P G+P
Sbjct: 1011 NLRLQQVLADFLACMLQFTQPAEGPIVLQVIPRMENIGSGMQIAHLEFRLVHPAPGVPEA 1070
Query: 1050 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
L+Q+MF S ++EGLGL + +K++K M+G VQY+RESE F+++ E P+ + +K
Sbjct: 1071 LIQEMFRHSPGASREGLGLYISQKLVKTMSGTVQYLRESESSSFIVLVEFPVAQLSTK 1128
>gi|51556875|gb|AAU06208.1| phytochrome C [Triticum aestivum]
gi|51556889|gb|AAU06215.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1201 bits (3107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/1135 (53%), Positives = 791/1135 (69%), Gaps = 51/1135 (4%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + S S+ R+ H+ + +AQ VDARLHA FE S + FDYS SV
Sbjct: 5 RSNNRPACSRGSSARSKHS-------ERVVAQTPVDARLHAEFEGSH---RHFDYSSSVS 54
Query: 73 TMSHS--VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSV 130
++ S +SAYL +QRG +IQPFGC +A+ +F ++AYSENA EML L P +V
Sbjct: 55 ALNRSGASTSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAV 114
Query: 131 PNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRV 190
P +++++ L +G DVRTLF S S+V L KA E+ LLNPI +H++ +GKPFYAILHR+
Sbjct: 115 PTIDQRDALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRI 174
Query: 191 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
DVG+VIDLEP D ++ AGA++S KLA +AIS+LQSLPGG++ LLCD +V V +LT
Sbjct: 175 DVGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPGGNLSLLCDVLVREVSELT 234
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC
Sbjct: 235 GYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCA 294
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN---------G 361
A+P+ +IQD+ L QP+ L GST+RAPHGCHAQYMANMGSIASL +++ IN G
Sbjct: 295 ASPVKLIQDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDEDEDGDTG 354
Query: 362 NDEEAVGGR---------STTR-------------LWAFGLQLNMELQLASQLSEKHVLR 399
+D++ G + ++ R L FG+QLN E++LASQ E+H+LR
Sbjct: 355 SDQQPKGRKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILR 414
Query: 400 TQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWL 459
TQTLLCDMLLRD+P GI TQSP++MDLVKCDGAAL YQ + LG TP+E +IK IV WL
Sbjct: 415 TQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWL 474
Query: 460 LTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGA 519
L H STGLSTDSL +AGYP A+ LG+ VCGMA I+ + F+FWFRSHTAKEIKWGGA
Sbjct: 475 LECHDGSTGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGA 534
Query: 520 KHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN 578
KH P D DD G+RMHPRSSF+AFLEVVK RS+PW++ EMDAIHSLQLILR S +D +A++
Sbjct: 535 KHEPGDADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDAND 594
Query: 579 --SKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAEL 635
++++V A D+ ++QG+ EL V EMVRLIETATAPI AVD+ G +NGWN KVAE+
Sbjct: 595 NTARSIVEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEI 654
Query: 636 TGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFV 695
TGL EA+G LV DLV + E+V +L+ AL+G E++N+EIKL+TF + K V +
Sbjct: 655 TGLPTTEAIGMLLV-DLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTFHQQESKGPVVL 713
Query: 696 VVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDE 755
+VNAC S+D ++ +VGVCFV QD+T K+VMDK+ IQGDY AIV +PN LIPPIF ++
Sbjct: 714 MVNACCSRDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMIND 773
Query: 756 NTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGG 812
C EWN AM+K+TG R D I K+L+GEVF CR+K LTK I ++ G
Sbjct: 774 LGSCLEWNEAMQKITGIKREDAIDKLLIGEVFTLHDYGCRVKDQVTLTKLSILMNTVISG 833
Query: 813 QDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEK 872
Q+ EK F F+ NGKY+++LLTANKR + EG+I GA CFL +ASPELQ AL VQ+ E+
Sbjct: 834 QEPEKLAFGFFNTNGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQ 893
Query: 873 KCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDV 932
KEL YI QE+KNPL+G+ FT LLE +DLTE+Q+QL ++ C++Q+ KI+ D
Sbjct: 894 AATHSFKELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDN 953
Query: 933 DLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQAR 992
DLE IE +E EF L +N V+ Q M L +E+ + L RD P E+ ++ +YGD R
Sbjct: 954 DLEGIEQCYMEMNTVEFNLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLR 1013
Query: 993 IQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQ 1052
+QQVLAD+L ++++ AEG + + V P + G I H EFR+V P G+P L+Q
Sbjct: 1014 LQQVLADYLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEALIQ 1073
Query: 1053 DMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
+MF +++EGLGL + +K++K M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1074 EMFRHGPGVSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|350536201|ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
Length = 1123
Score = 1197 bits (3096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/1109 (53%), Positives = 779/1109 (70%), Gaps = 46/1109 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ------ISAYLSKIQR 92
++ +AQ ++DA+LHA FE ESG SFDYS SVR S + E++ +AYL +IQ+
Sbjct: 20 ARIVAQTSIDAKLHADFE---ESGDSFDYSSSVRVTSVAGDEEKPKSDKVTTAYLHQIQK 76
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSS 152
G IQPFGC +A+DE T +VIA+SENA EML + +VP++ + +L IGTD+RT+FT
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGP 136
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S L+KA G E++LLNP+ +H KN+GKPFYAI+HRV +++D EP + + ++ AG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDFEPVKPYEVPMTAAG 196
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHEDDHGEVVSEI 256
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + V+QDE L L L GST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST-----TRLWA---------- 377
LRAPH CH QYM NM SIASL +AV++N DEE S+ RLW
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPR 376
Query: 378 ----------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSP 421
F + +N EL+L +Q EK++LRTQTLLCDML+RD+P GIV+QSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y+ K + LG+ P++ Q++DIV WL YH DSTGLSTDSL DAG+P
Sbjct: 437 NIMDLVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
A LGDAVCGMA I+ +D+LFWFRSHTA E++WGGAKH P +KDDG++MHPRSSFKAF
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA-VVNAQLVDLELQGVDELSS 600
LEVVK+RS+PW + EMDAIHSLQLILR++F+DAE NS + +L DL++ G+ EL S
Sbjct: 557 LEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKKLNDLKIDGMQELES 616
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
V EMVRLIETA PI AVDV G VNGWN K+AELTGL V+EA+GK L+ LV +
Sbjct: 617 VTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGKHLL-TLVEDSSVDT 675
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVT 720
V+ +L AL+G+E+KNVE +++T G + ++VNAC+SKD +N+VGVCF+ D+T
Sbjct: 676 VNKMLELALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDVRDNVVGVCFMAHDIT 735
Query: 721 DQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGK 780
QK +MDKF I+GDY+AI+ +P+PLIPPIF +D+ CSEWNTAM KLTGW R D++ K
Sbjct: 736 GQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTAMTKLTGWRRDDVMDK 795
Query: 781 MLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
ML+GEVFG+ CCRLK +A F + L+NA GQ++EK PF F R GKYV+ LL +
Sbjct: 796 MLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGFFARYGKYVECLLCVS 855
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
KR++ EG + G FCFLQ+AS ELQQAL VQR E+ RLK LAYI ++I+NPLSG+ F
Sbjct: 856 KRLDKEGAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIF 915
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
+ +LE T L E+QK +L TSA C++Q+ KI+ D DL+SI DG L+ E EF L V+ A
Sbjct: 916 SRKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVLVA 975
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
+SQVMM +N+ + D+ E++ +YGD R+QQVLA+FLL V +PS G + I
Sbjct: 976 SISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNATPSG-GQLSI 1034
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKL 1077
R T + E + EFR+ G G+P EL+ MF S ++EG+ L + RK++KL
Sbjct: 1035 SGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLGQMFGSEADASEEGISLLVSRKLVKL 1094
Query: 1078 MNGEVQYIRESERCYFLIIFELPMPRRGS 1106
MNGEVQY+RE+ + F+I EL + S
Sbjct: 1095 MNGEVQYLREAGQSTFIISVELAVATNSS 1123
>gi|464383|sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A
gi|7550158|gb|AAB21533.2| type A phytochrome [Solanum tuberosum]
Length = 1123
Score = 1190 bits (3078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/1109 (52%), Positives = 781/1109 (70%), Gaps = 46/1109 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ------ISAYLSKIQR 92
++ IAQ ++DA+LHA FE ESG SFDYS SVR + + EQ+ +AYL +IQ+
Sbjct: 20 ARIIAQTSIDAKLHADFE---ESGDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQK 76
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSS 152
G IQPFGC +A+DE T +VIA+SENA EML + +VP++ + +L IG D+RT+FT
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGIDIRTIFTGP 136
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S L+KA G E++LLNP+ +H KN+GKPFYAI+HRV ++ID EP + + ++ AG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + V+QDE L L L GST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST-----TRLWA---------- 377
LRAPH CH QYM NM SIASL +AV++N DEE S+ RLW
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVSHNTTPR 376
Query: 378 ----------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSP 421
F + +N EL+L +Q EK++LRTQTLLCDML+RD+P GIV+QSP
Sbjct: 377 FAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDL+KCDGAAL Y+ K + LG+ P++ Q+ DIV WL YH DSTGLSTDSL DAG+P
Sbjct: 437 NIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
A LGDAVCGMA I+ +D+LFW+RSHTA E++WGGAKH P +KDDG++MHPRSSFK F
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKGF 556
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV-VNAQLVDLELQGVDELSS 600
LEVVK+RS+PW + EMD IHSLQLILR++F+DA+A NS + ++ +L DL++ G+ EL +
Sbjct: 557 LEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELEA 616
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
V EMVRLIETA+ PIFAVDV G VNGWN KVAELTGL V+EA+GK L+ LV +
Sbjct: 617 VTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLL-TLVEDSSVDT 675
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVT 720
V+ +L AL+G+E++NVE +++T G + ++VNAC+SKD +++VGVCF+ QD+T
Sbjct: 676 VNKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDIT 735
Query: 721 DQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGK 780
QK +MDKF I+GDY+AI+ +P+PLIPPIF +D+ CSEWN+AM LTGW R D++ K
Sbjct: 736 GQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTMLTGWRRDDVMDK 795
Query: 781 MLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
ML+GEVFG+ CCRLK +A F + L+NA GQ++EK PF F R GKYV+ LL +
Sbjct: 796 MLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFARYGKYVECLLCVS 855
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
KR++ EG + G FCFLQ+AS ELQQAL VQR E+ RLK LAYI ++I+NPLSG+ F
Sbjct: 856 KRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIF 915
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
+ +LE T L E+QK +L TSA C++Q+ KI+ D DL+SI +G L+ E EF L V+ A
Sbjct: 916 SRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDLEMLEFKLHEVLVA 975
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
+SQVMM +N+ + D+ E++ +YGD R+QQVLA+FLL V +PS G + I
Sbjct: 976 SISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSG-GKLSI 1034
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKL 1077
+ T + E + EFR+ G G+P EL+ MF S ++EG+ L + RK++KL
Sbjct: 1035 SGKLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEGISLLVSRKLVKL 1094
Query: 1078 MNGEVQYIRESERCYFLIIFELPMPRRGS 1106
MNGEVQY+RE+ R F+I EL + + S
Sbjct: 1095 MNGEVQYLREAGRSTFIISVELAVATKSS 1123
>gi|51556879|gb|AAU06210.1| phytochrome C [Triticum aestivum]
gi|51556881|gb|AAU06211.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1187 bits (3072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1138 (52%), Positives = 785/1138 (68%), Gaps = 57/1138 (5%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + S S+ R+ H+ + +AQ VDARLHA FE S + FDYS SV
Sbjct: 5 RSNNRPACSRGSSARSKHS-------ERVVAQTPVDARLHAEFEGSQ---RHFDYSSSVS 54
Query: 73 TMSHS--VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSV 130
++ S +SAYL +QRG +IQPFGC +A+ +F ++AYSENA E+L L P +V
Sbjct: 55 ALNRSGASTSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAV 114
Query: 131 PNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRV 190
P +++++ L +G DVRTLF S S+V L KA E+ LLNPI +H++ +GKPFYAILHR+
Sbjct: 115 PTIDQRDALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRI 174
Query: 191 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
DVG+VIDLEP D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V +LT
Sbjct: 175 DVGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELT 234
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC
Sbjct: 235 GYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCA 294
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GN 362
A+P+ +IQD+ L QP+ L GST+RAPHGCHAQYMANMGSIASL +++ IN
Sbjct: 295 ASPVKLIQDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTG 354
Query: 363 DEEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKH 396
++ GR +LW FG+QLN E++LASQ E+H
Sbjct: 355 SDQQPKGR---KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERH 411
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GI TQSP++MDLVKCDGAAL YQ + LG TP+E +IK IV
Sbjct: 412 ILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIV 471
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
WLL H STGLSTDSL +AGYP A+ LG+ VCGMA I+ + F+FWFRSHTAKEIKW
Sbjct: 472 AWLLECHDGSTGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKW 531
Query: 517 GGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
GGAKH P D DD G+RMHPRSSF+AFLEVVK RS+PW++ EMDAIHSLQLILR S +D +
Sbjct: 532 GGAKHEPGDADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDED 591
Query: 576 A--SNSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
A +N++++V A D+ ++QG+ EL V EMVRLIETATAPI AVD+ G +NGWN KV
Sbjct: 592 ANDNNARSIVEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKV 651
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AE+TGL EA+G LV DLV + E+V +L+ AL+G E++N+EIKL+T + K
Sbjct: 652 AEITGLPTTEAIGMLLV-DLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGP 710
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
V ++VNAC S+D ++ +VGVCFV QD+T K+VMDK+ IQGDY AIV +PN LIPPIF
Sbjct: 711 VVLMVNACCSRDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFM 770
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNA 809
++ C EWN AM+K+TG R D I K+L+GE+F CR+K LTK I ++
Sbjct: 771 INDLGSCLEWNEAMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTV 830
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQ+ EK F F+ +GKY+++LLTANKR + EG+I GA CFL +ASPELQ AL VQ+
Sbjct: 831 ISGQEPEKLAFGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKM 890
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKII 929
E+ KEL YI QE+KNPL+G+ FT LLE +DLTE+Q+QL ++ C++Q+ KI+
Sbjct: 891 SEQAATHSFKELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKIL 950
Query: 930 KDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGD 989
D DLE IE +E EF L +N V+ Q M + +E+ + L RD P E+ ++ +YGD
Sbjct: 951 HDNDLEGIEQCYMEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGD 1010
Query: 990 QARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPE 1049
R+QQVLAD+L ++++ AEG + + V P + G I H EFR+V P G+P
Sbjct: 1011 NLRLQQVLADYLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEA 1070
Query: 1050 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
L+Q+MF +++EGLGL + +K++K M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1071 LIQEMFRHGPGVSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|51556887|gb|AAU06214.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1187 bits (3071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1138 (52%), Positives = 782/1138 (68%), Gaps = 57/1138 (5%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + S S+ R+ H+ + +AQ VDARLHA FE S + FDYS SV
Sbjct: 5 RSNNRPACSRGSSARSKHS-------ERVVAQTPVDARLHAEFEGSQ---RHFDYSSSVS 54
Query: 73 TMSHS--VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSV 130
++ S +SAYL +QRG +IQPFGC +A+ +F ++AYSENA EML L P +V
Sbjct: 55 ALNRSGASTSSAVSAYLQNMQRGRYIQPFGCLLAIHSESFALLAYSENAAEMLDLTPHAV 114
Query: 131 PNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRV 190
P +++++ L +G DVRTLF S S+V L KA E+ LLNPI +H++ +GKPFYAILHR+
Sbjct: 115 PTIDQRDALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRI 174
Query: 191 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
DVG+VIDLEP D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V +LT
Sbjct: 175 DVGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELT 234
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC
Sbjct: 235 GYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCA 294
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GN 362
A+P+ +IQD+ L QP+ L GST+RAPHGCHAQYMANMGSIASL +++ IN
Sbjct: 295 ASPVKLIQDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTG 354
Query: 363 DEEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKH 396
++ GR +LW FG+QLN E++LASQ E+H
Sbjct: 355 SDQQPKGR---KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERH 411
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GI TQSP++MDLVKCDGAAL YQ + LG TP+E +IK IV
Sbjct: 412 ILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIV 471
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
WLL H STGLSTDSL +AGYP A+ LG+ VCGMA I+ + F+FWFRSHTAKEIKW
Sbjct: 472 AWLLECHDGSTGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKW 531
Query: 517 GGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
GGAK P D DD G+RMHPRSSF+AFLEVVK RS+PW++ EMDAIHSLQLILR S +D +
Sbjct: 532 GGAKQEPGDADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDED 591
Query: 576 AS--NSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
A+ N+ ++V A D+ ++QG+ EL V EMVRLIETATAPI AVD+ G +NGWN KV
Sbjct: 592 ATDNNAGSIVEAPSDDIKKIQGLLELRIVTNEMVRLIETATAPILAVDIVGNINGWNNKV 651
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AE+TGL EA+G LV DLV + E+V +L+ AL+G E++N+EIKL+TF + K
Sbjct: 652 AEITGLPTTEAIGMLLV-DLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTFHQQESKGP 710
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
V ++VNAC S+D + +VGVC V QD+T K++MDK+ IQGDY AIV +PN LIPPIF
Sbjct: 711 VVLMVNACCSRDLSEKVVGVCLVAQDLTGHKMIMDKYTRIQGDYVAIVKNPNELIPPIFM 770
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNA 809
++ C EWN AM+K+TG R D I K+L+GEVF CR+K LTK I ++
Sbjct: 771 INDLGSCLEWNEAMQKITGIKREDAIDKLLIGEVFTLHDYGCRVKDQATLTKLSILMNTV 830
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQ+ EK F F+ +GKY+++LLTANKR + EG+I GA CFL +ASPELQ AL VQ+
Sbjct: 831 ISGQEPEKLAFGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKM 890
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKII 929
E+ KEL YI QE+KNPL+G+ FT LLE +DLTE+Q+QL ++ C++Q+ KI+
Sbjct: 891 SEQAATHSFKELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKIL 950
Query: 930 KDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGD 989
D DLE IE +E EF L +N V+ Q M L +E+ + L RD P E+ ++ +YGD
Sbjct: 951 HDNDLEGIEQCYMEMNAVEFNLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSIYLYGD 1010
Query: 990 QARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPE 1049
R+QQVLAD+L ++++ AEG + + V P + G I H EFR+V P G+P
Sbjct: 1011 NLRLQQVLADYLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEA 1070
Query: 1050 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
L+Q+MF +++EGLGL + +K++K M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1071 LIQEMFRHGPGVSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|357115337|ref|XP_003559446.1| PREDICTED: phytochrome C-like [Brachypodium distachyon]
Length = 1140
Score = 1187 bits (3070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1136 (52%), Positives = 784/1136 (69%), Gaps = 52/1136 (4%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + A S S+ R+ H+ + +AQ VDARLHA FE S + FDYS SV
Sbjct: 5 RSNNRATCSRGSSARSKHS-------ERVVAQTPVDARLHAEFEGSQ---RRFDYSSSVS 54
Query: 73 TMSHS--VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSV 130
+ S +SAYL +QRG +IQPFGC +A TF ++AYSENA EML L P +V
Sbjct: 55 AANRSGASTSTAVSAYLQNMQRGRYIQPFGCLLAAHPETFALLAYSENAAEMLDLTPHAV 114
Query: 131 PNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRV 190
P +++++ LT+G DVRTLF S S+V L KA E+ LLNPI +H++ +GKPFYAILHR+
Sbjct: 115 PTIDQRDALTVGVDVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRI 174
Query: 191 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
DVG+VIDLEP D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V +LT
Sbjct: 175 DVGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELT 234
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC
Sbjct: 235 GYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCA 294
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE----- 365
A P+ +IQD+ L QP+ L GST+RAPHGCHAQYMANMGS+ASL +++ IN ++EE
Sbjct: 295 AVPVKLIQDDNLSQPISLCGSTMRAPHGCHAQYMANMGSVASLVMSITINEDEEEDGDTG 354
Query: 366 -------------AVGGRSTTR-------------LWAFGLQLNMELQLASQLSEKHVLR 399
V S+ R L FG+QLN E++LASQ E+H+LR
Sbjct: 355 SDQQPKGRKLWGLVVCHHSSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILR 414
Query: 400 TQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWL 459
TQTLLCDMLLRD+P GI TQSP++MDLVKCDGAAL Y+ + LG TP+E +IK+IV WL
Sbjct: 415 TQTLLCDMLLRDAPIGIFTQSPNVMDLVKCDGAALCYRNQIMVLGSTPSEGEIKNIVAWL 474
Query: 460 LTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGA 519
YH STGLSTDSL +AGYP A+ LG+ VCGMA I+ + F+ WFRSHTAKEIKWGGA
Sbjct: 475 QEYHDGSTGLSTDSLVEAGYPGASALGEIVCGMAAIKISSKGFILWFRSHTAKEIKWGGA 534
Query: 520 KHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN 578
KH P D DD G++MHPRSSF+AFLEVVK RS+PW++ EMDAIHSLQLILR S +D +A+N
Sbjct: 535 KHEPGDADDNGRKMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANN 594
Query: 579 SK---AVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+ ++V A D+ ++QG+ EL V EMVRLIETATAPI AVD+ G +NGWN K AE
Sbjct: 595 NNNVMSIVEAPSDDMKKIQGLLELRIVTNEMVRLIETATAPILAVDIVGNINGWNNKAAE 654
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
+TGL EA+G LV +V+ + E+V +L+ AL+G E++N+EIKL+TF V
Sbjct: 655 ITGLPTTEAIGMPLVQ-VVHGDSVEVVTQILNSALQGVEEQNLEIKLKTFHHLESNGPVI 713
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
++VNAC S+D + +VGVCFV QD+T QK+++DK+ IQGDY AIV +PN LIPPIF +
Sbjct: 714 LMVNACCSRDLSEKVVGVCFVAQDLTGQKMILDKYTRIQGDYVAIVKNPNELIPPIFMIN 773
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAFG 811
+ C EWN AM+++TG R D I K+L+GEVF CR+K LTK I ++
Sbjct: 774 DLGSCLEWNEAMQRITGIKREDAIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNTVIS 833
Query: 812 GQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQE 871
GQD EK PF FD +GK +++LLTANKR + EG+I GA CFL +ASPELQ AL VQ+ E
Sbjct: 834 GQDPEKLPFGFFDADGKCMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSE 893
Query: 872 KKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKD 931
+ KEL YI QE+KNPL+G+ FT +LLE ++LTE+Q+QLL ++ C++Q+ KI+ D
Sbjct: 894 QAATHSFKELTYIRQELKNPLNGMQFTRNLLEPSELTEEQRQLLASNVLCQEQLKKILHD 953
Query: 932 VDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQA 991
DLE IE +E EF L +N V+ Q M L +E+ + L RD P E+ ++ +YGD
Sbjct: 954 NDLEGIEQCYMEMNTVEFNLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNL 1013
Query: 992 RIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELV 1051
R+QQVLADFL ++++ AEG + + V P + G I H EFR+ P G+P L+
Sbjct: 1014 RLQQVLADFLACTLQFTQPAEGPIVLQVIPRKESIGSGMQIAHLEFRLNHPVPGVPETLI 1073
Query: 1052 QDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
Q+MF +++EGLGL + +K++K M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1074 QEMFRHGPGVSREGLGLHISQKLVKTMSGTVQYLREAEISSFIVLVEFPVAQLNSK 1129
>gi|51556885|gb|AAU06213.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1186 bits (3069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1138 (52%), Positives = 785/1138 (68%), Gaps = 57/1138 (5%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + S S+ R+ H+ + +AQ VDARLHA FE S + FDYS SV
Sbjct: 5 RSNNRPACSRGSSARSKHS-------ERVVAQTPVDARLHAEFEGSQ---RHFDYSSSVS 54
Query: 73 TMSHS--VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSV 130
++ S +SAY+ +QRG +IQPFGC +A+ +F ++AYSENA E+L L P +V
Sbjct: 55 ALNRSGASTSSAVSAYIQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAV 114
Query: 131 PNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRV 190
P +++++ L +G DVRTLF S S+V L KA E+ LLNPI +H++ +GKPFYAILHR+
Sbjct: 115 PTIDQRDALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRI 174
Query: 191 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
DVG+VIDLEP D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V +LT
Sbjct: 175 DVGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELT 234
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC
Sbjct: 235 GYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCA 294
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GN 362
A+P+ +IQD+ L QP+ L GST+RAPHGCHAQYMANMGSIASL +++ IN
Sbjct: 295 ASPVKLIQDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTG 354
Query: 363 DEEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKH 396
++ GR +LW FG+QLN E++LASQ E+H
Sbjct: 355 SDQQPKGR---KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERH 411
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GI TQSP++MDLVKCDGAAL YQ + LG TP+E +IK IV
Sbjct: 412 ILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIV 471
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
WLL H STGLSTDSL +AGYP A+ LG+ VCGMA I+ + F+FWFRSHTAKEIKW
Sbjct: 472 AWLLECHDGSTGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKW 531
Query: 517 GGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
GGAKH P D DD G+RMHPRSSF+AFLEVVK RS+PW++ EMDAIHSLQLILR S +D +
Sbjct: 532 GGAKHEPGDADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDED 591
Query: 576 A--SNSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
A +N++++V A D+ ++QG+ EL V EMVRLIETATAPI AVD+ G +NGWN KV
Sbjct: 592 ANDNNARSIVEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKV 651
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AE+TGL EA+G LV DLV + E+V +L+ AL+G E++N+EIKL+T + K
Sbjct: 652 AEITGLPTTEAIGMLLV-DLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGP 710
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
V ++VNAC S+D ++ +VGVCFV QD+T K+VMDK+ IQGDY AIV +PN LIPPIF
Sbjct: 711 VVLMVNACCSRDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFM 770
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNA 809
++ C EWN AM+K+TG R D I K+L+GE+F CR+K LTK I ++
Sbjct: 771 INDLGSCLEWNEAMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTV 830
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQ+ EK F F+ +GKY+++LLTANKR + EG+I GA CFL +ASPELQ AL VQ+
Sbjct: 831 ISGQEPEKLAFGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKM 890
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKII 929
E+ KEL YI QE+KNPL+G+ FT LLE +DLTE+Q+QL ++ C++Q+ KI+
Sbjct: 891 SEQAATHSFKELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKIL 950
Query: 930 KDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGD 989
D DLE IE +E EF L +N V+ Q M + +E+ + L RD P E+ ++ +YGD
Sbjct: 951 HDNDLEGIEQCYMEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGD 1010
Query: 990 QARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPE 1049
R+QQVLAD+L ++++ AEG + + V P + G I H EFR+V P G+P
Sbjct: 1011 NLRLQQVLADYLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEA 1070
Query: 1050 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
L+Q+MF +++EGLGL + +K++K M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1071 LIQEMFRHGPGVSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|76574169|gb|ABA46868.1| phytochrome A [Solanum tuberosum]
Length = 1123
Score = 1186 bits (3069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/1107 (53%), Positives = 779/1107 (70%), Gaps = 46/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ------ISAYLSKIQR 92
++ IAQ ++DA+LHA FE ESG SFDYS SVR S + E++ +AYL +IQ+
Sbjct: 20 ARIIAQTSIDAKLHADFE---ESGDSFDYSSSVRVTSVAGDEERPKSDKVTTAYLHQIQK 76
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSS 152
G IQPFG +A+DE T +VIA+SENA EML + +VP++ + +L IGTD+RT+FT
Sbjct: 77 GKFIQPFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGP 136
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S L+KA G E++LLNP+ +H KN+GKPFYAI+HRV ++ID EP + + ++ AG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + V+QDE L L L GST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST-----TRLWA---------- 377
LRAPH CH QYM NM S+ASL +AV++N DEE S+ RLW
Sbjct: 317 LRAPHYCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPR 376
Query: 378 ----------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSP 421
F + +N EL+L +Q EK++LRTQTLLCDML+RD+P GIV+QSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y+ K + LG+ P++ Q+ DIV WL YH DSTGLSTDSL DAG+P
Sbjct: 437 NIMDLVKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
A LGDAVCGMA I+ +D+LFW+RSHTA E++WGGAKH P +KDDG++MHPRSSFKAF
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA-VVNAQLVDLELQGVDELSS 600
LEVVK+RS+PW + EMDAIHSLQLILR++F+DA+A NS ++ +L DL + G+ EL +
Sbjct: 557 LEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIHTKLNDLRIDGMQELEA 616
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
V EM+RLIETA+ PIFAVDV G VNGWN KVAELTGL V+EA+GK L+ LV +
Sbjct: 617 VTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLL-TLVEDSSVDT 675
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVT 720
V+ +L AL+G+E++NVE +++ G + ++VNAC+SKD +++VGVCF+ QD+T
Sbjct: 676 VNKMLELALQGKEERNVEFEIKAHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDIT 735
Query: 721 DQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGK 780
QK +MDKF I+GDY+AI+ +P+PLIPPIF +D+ CSEWN+AM KLTGW R D++ K
Sbjct: 736 GQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVMDK 795
Query: 781 MLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
ML+GEVFG+ CCRLK +A F + L+NA GQ++EK PF F R GKYV+ LL +
Sbjct: 796 MLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFGRYGKYVECLLCVS 855
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
KR++ EG + G FCFLQ+AS ELQQAL VQR E+ RLK LAYI ++IKNPLSG+ F
Sbjct: 856 KRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIKNPLSGIIF 915
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
+ +LE T L E+QK +L TSA C++Q+ KI+ D DL+SI +G L+ E EF L V+ A
Sbjct: 916 SWKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEGYLDLEMLEFKLHEVLVA 975
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
+SQVMM +N+ + D+ E++ +YGD R+QQVLA+FLL V +PS G + I
Sbjct: 976 SISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSG-GQLSI 1034
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKL 1077
R T + E + EFR+ G G+P EL+ M S ++EG+ L + RK++KL
Sbjct: 1035 SGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMLGSEVDASEEGIFLLVSRKLVKL 1094
Query: 1078 MNGEVQYIRESERCYFLIIFELPMPRR 1104
MNGEVQY+RE+ R F+I EL + +
Sbjct: 1095 MNGEVQYLREAGRSTFIISVELAVATK 1121
>gi|119926110|emb|CAC82798.2| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1185 bits (3066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/1138 (52%), Positives = 785/1138 (68%), Gaps = 57/1138 (5%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + S S+ R+ H+ + +AQ VDARLHA FE S + FDYS SV
Sbjct: 5 RSNNRPACSRGSSARSKHS-------ERVVAQTPVDARLHAEFEGSQ---RHFDYSSSVS 54
Query: 73 TMSHS--VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSV 130
++ S +SAY+ +QRG +IQPFGC +A+ +F ++AYSENA E+L L P +V
Sbjct: 55 ALNRSGASTSSAVSAYIQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAV 114
Query: 131 PNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRV 190
P +++++ L +G DVRTLF S S+V L KA E+ LLNPI +H++ +GKPFYAILHR+
Sbjct: 115 PTIDQRDALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRI 174
Query: 191 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
DVG+VIDLEP D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V +LT
Sbjct: 175 DVGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELT 234
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC
Sbjct: 235 GYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCA 294
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GN 362
A+P+ +IQD+ L QP+ L GST+RAPHGCHAQYMANMGSIASL +++ IN
Sbjct: 295 ASPVKLIQDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTG 354
Query: 363 DEEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKH 396
++ GR +LW FG+QLN E++LASQ E+H
Sbjct: 355 SDQQPKGR---KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERH 411
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GI TQSP++MDLVKCDGAAL YQ + LG TP+E +IK IV
Sbjct: 412 ILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIV 471
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
WLL H STGLSTDSL +AGYP A+ LG+ VCGMA I+ + F+FWFRSHTAKEIKW
Sbjct: 472 AWLLECHDGSTGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKW 531
Query: 517 GGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
GGAKH P D DD G+RMHPRSSF+AFLEVVK RS+PW++ EMDAIHSLQLILR S +D +
Sbjct: 532 GGAKHEPGDADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDED 591
Query: 576 A--SNSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
A +N++++V A D+ ++QG+ EL V EMVRLIETATAPI AVD+ G +NGWN KV
Sbjct: 592 ANDNNARSIVEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKV 651
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AE+TGL EA+G LV DLV + E+V +L+ AL+G E++N+EIKL+T + K
Sbjct: 652 AEITGLPTTEAIGMLLV-DLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGP 710
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
V ++VNAC S+D ++ +VGVCFV QD+T K+VMDK+ IQGDY AIV +PN LIPPIF
Sbjct: 711 VVLMVNACCSRDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFM 770
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNA 809
++ C EWN AM+K+TG R D I K+++GE+F CR+K LTK I ++
Sbjct: 771 INDLGSCLEWNEAMQKITGIKREDAIDKLVIGELFTLHDYGCRVKDQVTLTKLSILMNTV 830
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQ+ EK F F+ +GKY+++LLTANKR + EG+I GA CFL +ASPELQ AL VQ+
Sbjct: 831 ISGQEPEKLAFGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKM 890
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKII 929
E+ KEL YI QE+KNPL+G+ FT LLE +DLTE+Q+QL ++ C++Q+ KI+
Sbjct: 891 SEQAATHSFKELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKIL 950
Query: 930 KDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGD 989
D DLE IE +E EF L +N V+ Q M + +E+ + L RD P E+ ++ +YGD
Sbjct: 951 HDNDLEGIEQCYMEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGD 1010
Query: 990 QARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPE 1049
R+QQVLAD+L ++++ AEG + + V P + G I H EFR+V P G+P
Sbjct: 1011 NLRLQQVLADYLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEA 1070
Query: 1050 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
L+Q+MF +++EGLGL + +K++K M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1071 LIQEMFRHGPGVSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|51556883|gb|AAU06212.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1185 bits (3066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1138 (52%), Positives = 784/1138 (68%), Gaps = 57/1138 (5%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + S S+ R+ H+ + +AQ VDARLHA FE S + FDYS SV
Sbjct: 5 RSNNRPACSRGSSARSKHS-------ERVVAQTPVDARLHAEFEGSQ---RHFDYSSSVS 54
Query: 73 TMSHS--VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSV 130
++ S +SAYL +QRG +IQPFGC +A+ +F ++AYSENA E+L L P +V
Sbjct: 55 ALNRSGASTSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAV 114
Query: 131 PNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRV 190
P +++++ L +G DVRTLF S S+V L KA E+ LLNPI +H++ +GKPFYAILHR+
Sbjct: 115 PTIDQRDALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRI 174
Query: 191 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
DVG+VIDLEP D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V +LT
Sbjct: 175 DVGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELT 234
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC
Sbjct: 235 GYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCA 294
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GN 362
A+P+ +IQD+ L QP+ L GST+RAPHGCHAQYMANMGSIASL +++ IN
Sbjct: 295 ASPVKLIQDDDLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTG 354
Query: 363 DEEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKH 396
++ GR +LW FG+QLN E++LASQ E+H
Sbjct: 355 SDQQPKGR---KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERH 411
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GI TQSP++MDLVKCDGAAL YQ + LG TP+E +I IV
Sbjct: 412 ILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEITKIV 471
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
WLL H STGLSTDSL +AGYP A+ LG+ VCGMA I+ + F+FWFRSHTAKEIKW
Sbjct: 472 AWLLECHDGSTGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKW 531
Query: 517 GGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
GGAKH P D DD G+RMHPRSSF+AFLEVVK RS+PW++ EMDAIHSLQLILR S +D +
Sbjct: 532 GGAKHEPGDADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDED 591
Query: 576 A--SNSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
A +N++++V A D+ ++QG+ EL V EMVRLIETATAPI AVD+ G +NGWN KV
Sbjct: 592 ANDNNARSIVEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKV 651
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AE+TGL EA+G LV DLV + E+V +L+ AL+G E++N+EIKL+T + K
Sbjct: 652 AEITGLPTTEAIGMLLV-DLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGP 710
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
V ++VNAC S+D ++ +VGVCFV QD+T K+VMDK+ IQGDY AIV +PN LIPPIF
Sbjct: 711 VVLMVNACCSRDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFM 770
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNA 809
++ C EWN AM+K+TG R D I K+L+GE+F CR+K LTK I ++
Sbjct: 771 INDLGSCLEWNEAMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTV 830
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQ+ EK F F+ +GKY+++LLTANKR + EG+I GA CFL +ASPELQ AL VQ+
Sbjct: 831 ISGQEPEKLAFGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKM 890
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKII 929
E+ KEL YI QE+KNPL+G+ FT LLE +DLTE+Q+QL ++ C++Q+ KI+
Sbjct: 891 SEQAATHSFKELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKIL 950
Query: 930 KDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGD 989
D DLE IE +E EF L +N V+ Q M + +E+ + L RD P E+ ++ +YGD
Sbjct: 951 HDNDLEGIEQCYMEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGD 1010
Query: 990 QARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPE 1049
R+QQVLAD+L ++++ AEG + + V P + G I H EFR+V P G+P
Sbjct: 1011 NLRLQQVLADYLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEA 1070
Query: 1050 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
L+Q+MF +++EGLGL + +K++K M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1071 LIQEMFRHGPGVSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|51556877|gb|AAU06209.1| phytochrome C [Triticum spelta]
Length = 1139
Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/1138 (52%), Positives = 785/1138 (68%), Gaps = 57/1138 (5%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + S S+ R+ H+ + +AQ VDARLHA FE S + FDYS SV
Sbjct: 5 RSNNRPACSRGSSARSKHS-------ERVVAQTPVDARLHAEFEGSQ---RHFDYSSSVS 54
Query: 73 TMSHS--VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSV 130
++ S +SAYL +QRG +IQPFGC +A+ +F ++AY+ENA E+L L P +V
Sbjct: 55 ALNRSGASTSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYNENAAEILDLTPHAV 114
Query: 131 PNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRV 190
P +++++ L +G DVRTLF S S+V L KA E+ LLNPI +H++ +GKPFYAILHR+
Sbjct: 115 PTIDQRDALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRI 174
Query: 191 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
DVG+VIDLEP D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V +LT
Sbjct: 175 DVGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELT 234
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVM Y+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC
Sbjct: 235 GYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCA 294
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GN 362
A+P+ +IQD+ L QP+ L GST+RAPHGCHAQYMANMGSIASL +++ IN
Sbjct: 295 ASPVKLIQDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTG 354
Query: 363 DEEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKH 396
++ GR +LW FG+QLN E++LASQ E+H
Sbjct: 355 SDQQPKGR---KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERH 411
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GI TQSP++MDLVKCDGAAL YQ + LG TP+E +IK IV
Sbjct: 412 ILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIV 471
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
WLL H STGLSTDSL +AGYP A+ LG+ VCGMA I+ + F+FWFRSHTAKEIKW
Sbjct: 472 AWLLECHDGSTGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKW 531
Query: 517 GGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
GGAKH P D DD G+RMHPRSSF+AFLEVVK RS+PW++ EMDAIHSLQLILR S +D +
Sbjct: 532 GGAKHEPGDADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDED 591
Query: 576 A--SNSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
A +N++++V A D+ ++QG+ EL V EMVRLIETATAPI AVD+ G ++GWN KV
Sbjct: 592 ANDNNARSIVEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNISGWNNKV 651
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AE+TGL EA+G LV DLV + E+V +L+ AL+G E++N+EIKL+T + K
Sbjct: 652 AEITGLPTTEAIGMLLV-DLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGP 710
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
V ++VNAC S+D ++ +VGVCFV QD+T K+VMDK+ IQGDY AIV +PN LIPPIF
Sbjct: 711 VVLMVNACCSRDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFM 770
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNA 809
++ C EWN AM+K+TG R D I K+L+GE+F CR+K LTK I ++
Sbjct: 771 INDLGSCLEWNEAMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTV 830
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQ+ EK F F+ +GKY+++LLTANKR + EG+I GA CFL +ASPELQ AL VQ+
Sbjct: 831 ISGQEPEKLAFGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKM 890
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKII 929
E+ KEL YI QE+KNPL+G+ FT LLE +DLTE+Q+QL ++ C++Q+ KI+
Sbjct: 891 SEQAATHSFKELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKIL 950
Query: 930 KDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGD 989
D DLE IE +E EF L +N V+ Q M + +E+ + L RD P E+ ++ +YGD
Sbjct: 951 HDNDLEGIEQCYMEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGD 1010
Query: 990 QARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPE 1049
R+QQVLAD+L ++++ AEG + + V P + G I H EFR+V P G+P
Sbjct: 1011 NLRLQQVLADYLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFRLVHPAPGVPEA 1070
Query: 1050 LVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
L+Q+MF +++EGLGL + +K++K M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1071 LIQEMFRHGPGVSREGLGLHISQKLVKTMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|9049368|dbj|BAA99410.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 1183 bits (3061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1123 (52%), Positives = 785/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA +LGDAVCGMA I+ +D +FWFRSHTA E++WGGAKH+
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALSLGDAVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHN 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTN 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + + VNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHQSRADAGTISLAVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L+ A Q++EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNGAVTSQESEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKY++ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K +AYI ++I+NPLSGV FT ++E T+L +Q+Q+L TSA C++Q+ K++ D DLESI
Sbjct: 898 KAIAYIKRQIRNPLSGVMFTREMIEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ A SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKDQPGRSVHLAYLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIISAEL 1117
>gi|464380|sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1
gi|297478|emb|CAA47284.1| type-A phytochrome [Nicotiana tabacum]
Length = 1124
Score = 1180 bits (3052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1121 (52%), Positives = 784/1121 (69%), Gaps = 53/1121 (4%)
Query: 27 RAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ---- 82
R+ H+A + IAQ T+DA+LHA FE ESG SFDYS SVR S + E++
Sbjct: 15 RSKHSA-------RIIAQTTIDAKLHADFE---ESGDSFDYSSSVRVTSVAGDERKPKSD 64
Query: 83 --ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILT 140
+AYL++IQ+G IQPFGC +A+DE TF+VIA+SENA EML + +VP++ + L
Sbjct: 65 RVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALG 124
Query: 141 IGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP 200
IGTD+RT+FT S+ L+KA G E++LLNP+ +H K +GKP+YAI+HRV ++ID EP
Sbjct: 125 IGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDFEP 184
Query: 201 ARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRF 260
+ + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+V+ V +LTGYDRVM Y+F
Sbjct: 185 VKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKF 244
Query: 261 HEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDE 320
H+D+HGEVVAE +P L+PY GLHYPATDIPQA+RFLF +N+VRMI DC A + V+QDE
Sbjct: 245 HDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDE 304
Query: 321 GLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST-----TRL 375
L L L GSTLRAPH CH QYM NM SIASL +AV++N DEE ST RL
Sbjct: 305 KLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRL 364
Query: 376 WA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 409
W F + +N EL+L SQ+ EK++LRTQTLLCDML+
Sbjct: 365 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLM 424
Query: 410 RDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGL 469
R +P GIV+QSP+IMDLVKCDGAAL Y+ K + LG+TP++ Q+ DIV WL YH DSTGL
Sbjct: 425 RVAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGL 484
Query: 470 STDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 529
STDSL DAG+P A LGD VCGMA I+ + +LFW+RSHTA E++WGGAKH P +KDDG
Sbjct: 485 STDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDG 544
Query: 530 QRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA-VVNAQLV 588
++MHPRSSFKAFLEVVK+RS+PW + EMDAIHSLQLILR++ +DA+A +S +++ +L
Sbjct: 545 RKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLN 604
Query: 589 DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSL 648
DL++ G+ EL +V EMVRLIETA+ PIFAVDV G +NGWN K+AELTGL V+EA+G L
Sbjct: 605 DLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHL 664
Query: 649 VHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNN 708
+ LV + V +L AL+G+E++NVE +++T G + ++VNAC+S+D ++
Sbjct: 665 L-TLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGDS 723
Query: 709 IVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEK 768
+VGVCF+ QD+T QK +MDKF I+GDY+AI+ +P+PLIPPIF +D+ CSEWN+AM K
Sbjct: 724 VVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTK 783
Query: 769 LTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDR 825
LTGW R D+I KML+GEVFG+ CCRLK +A F + L+NA GQ+ K F F R
Sbjct: 784 LTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFAR 843
Query: 826 NGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYIC 885
NGKYV+ LL +KR++ EG + G FCFLQ+AS ELQQAL +QR E+ RLK LAYI
Sbjct: 844 NGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIR 903
Query: 886 QEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFE 945
++I+NPLSG+ F+ +LE T+L E+QK +L TS+ C++Q+ KI+ D DL+SI DG L+ E
Sbjct: 904 RQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDLE 963
Query: 946 KAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMV 1005
EF L V+ A +SQ+MM +N+ ++ D+ E++ +YGD R+QQVLA+FLL V
Sbjct: 964 MLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVCV 1023
Query: 1006 RYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEG 1065
+PS G + I T + E + E R+ G G+P EL+ MF + ++EG
Sbjct: 1024 NSTPSG-GQLSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELLSQMFGTEAEASEEG 1082
Query: 1066 LGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGS 1106
+ L + RK++KLMNGEVQY+RE+ R F+I EL + + S
Sbjct: 1083 ISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATKSS 1123
>gi|37926897|gb|AAP06790.1| phytochrome C1 apoprotein [Zea mays]
gi|414872852|tpg|DAA51409.1| TPA: phytochromeC1 [Zea mays]
Length = 1135
Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/1126 (52%), Positives = 778/1126 (69%), Gaps = 50/1126 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSH-SVP 79
S +S+ R+ H+A + +AQ VDA+LHA FE S + FDYS SV + S
Sbjct: 12 SRSSSARSKHSA-------RVVAQTPVDAQLHAEFEGSQ---RHFDYSSSVGAANRPSAS 61
Query: 80 EQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEIL 139
+S YL +QRG +IQPFGC +AV TF ++AYSENA EML L P +VP +++++ L
Sbjct: 62 TSTVSTYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTIDQRDAL 121
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
IG DVRTLF S SSV L KA E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLE
Sbjct: 122 GIGVDVRTLFRSQSSVALHKAAAFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLE 181
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+
Sbjct: 182 PVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYK 241
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
F+EDEHGEV++E +R DLEPY GLHYPATDIPQASRFLF +N+VRMI DC ATP+ VIQD
Sbjct: 242 FYEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCCATPVKVIQD 301
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----R 374
+ L QPL L GSTLRA HGCHAQYMANMGS+ASLA++V IN ++EE S +
Sbjct: 302 DSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLAMSVTINEDEEEDGDTGSDQQPKGRK 361
Query: 375 LWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDML 408
LW FG+QLN E++LA+Q E+H+LRTQTLLCDML
Sbjct: 362 LWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDML 421
Query: 409 LRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTG 468
LRD+P GI T+SP++MDLVKCDGAALYYQ + LG TP+E++IK I WL H STG
Sbjct: 422 LRDAPVGIFTRSPNVMDLVKCDGAALYYQNQLLVLGSTPSESEIKSIATWLQDNHDGSTG 481
Query: 469 LSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED-KD 527
LSTDSL +AGYP A L + VCGMA I+ +DF+FWFRSHT KEIKWGGAKH P D D
Sbjct: 482 LSTDSLVEAGYPGAVALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADD 541
Query: 528 DGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNA 585
DG+RMHPRSSFKAFLEVVK RS+PW++ EMDAIHSLQLILR S D +A +N +++V A
Sbjct: 542 DGRRMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLPDEDANRNNVRSIVKA 601
Query: 586 QLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
D+ ++QG+ EL +V EMVRLIETATAP+ AVD+ G +NGWN K AELTGL V EA+
Sbjct: 602 PSDDMKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAI 661
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
G+ L+ DLV + E+V +L AL+G E++N+EIKL+TF V + VN+C S+D
Sbjct: 662 GRPLI-DLVVTDSIEVVKQILDSALQGIEEQNMEIKLKTFHEHECNGPVILKVNSCCSRD 720
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNT 764
+ ++GVCFV QD+T QK++MDK+ IQGDY AIV +P LIPPIF ++ C EWN
Sbjct: 721 LSEKVIGVCFVAQDLTRQKMIMDKYTRIQGDYVAIVKNPTELIPPIFMINDLGSCLEWNK 780
Query: 765 AMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFP 821
AM+K+TG R D I K+L+GEVF CR+K LTK I ++ GQD EK F
Sbjct: 781 AMQKITGIKREDAINKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLFFG 840
Query: 822 LFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKEL 881
FD +GKY+++LLT NKR + EG+I GA CFL +ASPELQ AL VQ+ E+ KEL
Sbjct: 841 FFDTDGKYIESLLTVNKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATNSFKEL 900
Query: 882 AYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS 941
YI QE++NPL+G+ FT +LL+ ++LTE+Q+QLL ++ C+ Q+ KI+ D DLESIE
Sbjct: 901 TYIRQELRNPLNGMQFTCNLLKPSELTEEQRQLLSSNVLCQDQLKKILHDTDLESIEQCY 960
Query: 942 LEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFL 1001
+E EF L +N V+ Q + L +E+ + + R+ P E+ + +YGD R+QQ+LAD+L
Sbjct: 961 MEMNTVEFNLEQALNTVLMQGIPLGKEKQISIERNWPVEVSCMYLYGDNLRLQQILADYL 1020
Query: 1002 LNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWM 1061
++++ +AEG + + V + G I H EFR+V P G+P L+Q+MF + +
Sbjct: 1021 ACALQFTQTAEGPIVLQVMSKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFQHNPGV 1080
Query: 1062 TQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
++EGLGL + +K++K M+G VQY+RE++ F+I+ E P+ + SK
Sbjct: 1081 SREGLGLYISQKLVKTMSGTVQYLREADTSSFIILMEFPVAQLSSK 1126
>gi|9049366|dbj|BAA99409.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 1179 bits (3049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1123 (51%), Positives = 784/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSEN+ E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENSPELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QDE L L L GSTLRAPH CH QYMANM SIAS +AV++N D E STT
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASHVMAVVVNEEDGEGDATDSTTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA +LGDAVCGMA I+ +D +FWFRSHTA E++WGGAKH+
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALSLGDAVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHN 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTN 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + + VNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHQSRADAGTISLAVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L+ A Q++EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNGAVTSQESEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKY++ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K +AYI ++I+NPLSGV FT ++E T+L +Q+Q+L TSA C++Q+ K++ D DLESI
Sbjct: 898 KAIAYIKRQIRNPLSGVMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ A SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIISAEL 1117
>gi|2499555|sp|P93673.1|PHYA_LATSA RecName: Full=Phytochrome type A
gi|1848273|gb|AAB47994.1| phytochrome type A [Lathyrus sativus]
Length = 1124
Score = 1176 bits (3043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/1121 (52%), Positives = 781/1121 (69%), Gaps = 48/1121 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
S T ++ +N+ S ++ IAQ TVDA+LHA FE ESG SFDYS VR +
Sbjct: 2 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFE---ESGSSFDYSSWVRVSGSVDGD 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
QQ +AYL+ IQRG IQPFGC +A+DE T +V+AYSENA EML + +VP++
Sbjct: 59 QQPRSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
L IGTD+RT+FT+ S+ L+KA G E++LLNPI +H K +GKPFYAI+HRV +
Sbjct: 119 DHPALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSL 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
+ID EP + + ++ AGA+QS KLA +AI++LQSL G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEV+AE +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A +
Sbjct: 239 VMAYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHV 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-----EAVGG 369
V+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N +DE +AV
Sbjct: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLP 358
Query: 370 RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTL 403
+ RLW F + +N E++L Q+ EK++LRTQTL
Sbjct: 359 QKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTL 418
Query: 404 LCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYH 463
LCDML+RD+P GIV+QSP+IMDLVKCDGAAL+Y+ K + LG TPTE QI++I W+ YH
Sbjct: 419 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTEYQIREIALWMSEYH 478
Query: 464 GDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHP 523
DSTGLSTDSL DAG+P A +L D VCGMA IT +D +FWFRSHTA EI+WGGAKH P
Sbjct: 479 TDSTGLSTDSLLDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEP 538
Query: 524 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKA 581
++DDG++MHPRSSFKAFLEVVK+RS+PW + EMDAIHSLQLILR++ +D + N+KA
Sbjct: 539 GEQDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKA 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+N +L DL+++G+ EL +V EMVRLIETAT PI AVDV G VNGWN K+AELTGL V
Sbjct: 599 -INTRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVG 657
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV +IV +L+ AL+GEE+KNV+ +++T G + + ++VNAC+
Sbjct: 658 EAIGKHLL-TLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVEFGPISLIVNACA 716
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PN LIPPIF +DE C E
Sbjct: 717 SRDLRENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCE 776
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTGW R +++ KML+GEVFG SCCRLK +A F I L+ A G +TEK
Sbjct: 777 WNAAMIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKV 836
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL+ +K+++ EG + G FCFLQ+ASPELQQAL +QR E+ RL
Sbjct: 837 AFGFFSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRL 896
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K L Y+ ++I+NPL+G+ F++ +LE TDL +QKQ++ TS+ C++Q+ KI+ D DL+ I
Sbjct: 897 KVLTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDDSDLDGII 956
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
DG L+ E AEF L V+ +SQVM + +++ D+ E I ++YGD R+QQVLA
Sbjct: 957 DGYLDLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIAKESLYGDSLRLQQVLA 1016
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSS 1058
DFLL + +P+ G V I T +Q + +V+ E + G G+P + MF ++
Sbjct: 1017 DFLLISINSTPNG-GQVVIASSLTKEQLGKSVHLVNLELSITHGGSGVPEAALNQMFGNN 1075
Query: 1059 RWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
++EG+ L + RK+LKLMNG+V+Y++E+ + F++ EL
Sbjct: 1076 VLESEEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVEL 1116
>gi|255543066|ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
gi|223548557|gb|EEF50048.1| phytochrome A, putative [Ricinus communis]
Length = 1124
Score = 1176 bits (3041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1107 (52%), Positives = 776/1107 (70%), Gaps = 46/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS----VP--EQQISAYLSKIQR 92
++ I+Q VDA+LHA FE ESG SFDYS SV S + P ++ +AYL IQ+
Sbjct: 20 ARIISQTAVDAKLHADFE---ESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQK 76
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSS 152
G IQPFGC +A+DE T++VIAYSENA EML + +VP++ +L IGTD+RT+FT+
Sbjct: 77 GKLIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAP 136
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+ L+KA G +++LLNPI +H K +GKPFYAI+HRV +ID EP + + ++ AG
Sbjct: 137 SASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAG 196
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS+LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FH+D+HGEV++E
Sbjct: 197 ALQSYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEV 256
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC A + V+QDE L L L GST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGST 316
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEE-----AVGGRSTTRLWA---------- 377
LRAPH CH QYM NM S+ASL +AV++N DE+ +V + RLW
Sbjct: 317 LRAPHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPR 376
Query: 378 ----------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSP 421
F + +N EL+L +Q+ EK++LRTQTLLCDMLLRD+P GI+TQSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRDAPLGILTQSP 436
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+I DLVKCDGAAL Y+ K + LGVTP++ QI+DI WL YH DSTGLSTDSL DAGY
Sbjct: 437 NITDLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYSA 496
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
A +L D VCGMA IT +D LFWFR+ TA EI+WGGAKH P +KDDG++MHPRSSFKAF
Sbjct: 497 ALSLEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA-VVNAQLVDLELQGVDELSS 600
LEVVK+RSLPW + EMDAIHSLQLILR++F+DAE ++ A ++++L DL+++G+ EL +
Sbjct: 557 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSRLSDLKIEGMQELEA 616
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
V EMVRLIETAT PI AVDV G VNGWN K+AELTGL V++A+GK L+ LV ++
Sbjct: 617 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLL-TLVEDGSIDL 675
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVT 720
V N+L AL+G+E++N++ +++T G++ + +VVNAC+S+D + N+VGVCFV QD+T
Sbjct: 676 VKNMLFSALQGKEEQNIQFEIKTHGSKVESGPISLVVNACASRDISENVVGVCFVAQDIT 735
Query: 721 DQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGK 780
QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN AM KLTGW R +++ K
Sbjct: 736 GQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWKREEVMDK 795
Query: 781 MLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
ML+GEVFG +CC LK +A + ++NA Q EK F F RN KYV+ LL +
Sbjct: 796 MLLGEVFGINRACCCLKNQEAFVNLGVLINNAMTSQVPEKVSFSFFARNKKYVECLLCVS 855
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
K+++ EG + G FCFLQ+AS ELQQAL +QR E+ RLK LAYI ++I+NPLSG+ F
Sbjct: 856 KKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTLAYIKRQIQNPLSGIMF 915
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
+ L+E T+L +QKQLL TSA C++Q+ KI+ D D++SI +G L+ E EF L V+ A
Sbjct: 916 SRKLMEITELDAEQKQLLHTSAQCQRQLSKILDDSDIDSIVEGYLDLEMVEFTLHEVLIA 975
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
+SQV + + + ++++ D E I T +YGD R+QQVLADFL V ++P G + I
Sbjct: 976 AISQVTIKSKGKGIRIVNDAAEVIMTETLYGDSIRLQQVLADFLAASVDFTPPG-GQLTI 1034
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKL 1077
+ T Q + +VH E R+ G G+P L+ MF S ++ EG+ L + RK++KL
Sbjct: 1035 AAKFTKDQLGQSVHLVHLELRITHAGGGIPEPLLNQMFGSDGDVSDEGVSLFISRKLVKL 1094
Query: 1078 MNGEVQYIRESERCYFLIIFELPMPRR 1104
MNG+VQY+RE+ + F++ EL R+
Sbjct: 1095 MNGDVQYLREAGKSSFIVTVELAAGRK 1121
>gi|326491833|dbj|BAJ98141.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1147
Score = 1174 bits (3037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/1111 (52%), Positives = 769/1111 (69%), Gaps = 50/1111 (4%)
Query: 40 KAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS--VPEQQISAYLSKIQRGGHIQ 97
+ +AQ VDA+LHA FE S + FDYS SV ++ S +SA+L +QRG +IQ
Sbjct: 25 RVVAQTPVDAQLHAEFE---SSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQRGRYIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+ +F ++AYSENA EML L P +VP +++++ L +G DVRTLF S S+V L
Sbjct: 82 PFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
KA E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S
Sbjct: 142 HKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV+AE +R DL
Sbjct: 202 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSDL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +N+VRMI DC A+P+ +IQD L QP+ L GST+RAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGSTMRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIINGNDE--------EAVGGRSTTRLWA------------ 377
GCHAQYMANMGSIASL ++V +N +D+ + GR +LW
Sbjct: 322 GCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGR---KLWGLVVCHHTSPRFV 378
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
FG+QLN E++LASQ E+H+LRTQTLLCDMLLRD+P GI TQSP++
Sbjct: 379 PSPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNV 438
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAAL YQ + LG P+E +IK I WLL H STGLSTDSL +AGYP A+
Sbjct: 439 MDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYPGAS 498
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFL 542
LG+ VCGMA I+ + F+FWFRSHTAKEIKW GAKH P D DD G+RMHPRSSF+AFL
Sbjct: 499 ALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFRAFL 558
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDL-ELQGVDELS 599
EVVK RS+PW++ EMDAIHSLQLILR S +D +A+ N +++V A D+ ++QG+ EL
Sbjct: 559 EVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLLELR 618
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
V EMVRLIETATAPI AVD+ G +NGWN KVAE+TGL EA+G LV DLV + E
Sbjct: 619 IVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLV-DLVEGDSVE 677
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
++ +L+ A++G E++N EIKL+TF + V ++VNAC S+D ++ +VGVCFV QD+
Sbjct: 678 VIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQDL 737
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T K+VMDK+ IQGDY AIV +PN LIPPIF ++ C EWN AM+K+TG R D I
Sbjct: 738 TGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAID 797
Query: 780 KMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTA 836
K+L+GEVF CR+K +TK I ++ GQ+ EK F F +GKY+++LLTA
Sbjct: 798 KLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLLTA 857
Query: 837 NKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVS 896
NKR + EG+I GA CFL + SPELQ AL VQ+ E+ KEL YI QE+KNPL+G+
Sbjct: 858 NKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNGMQ 917
Query: 897 FTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVIN 956
FT LLE +DLTE+Q+QL ++ C++Q+ KI+ D DLE IE +E EF L +N
Sbjct: 918 FTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEFNLEEALN 977
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
V+ Q M L +E+ + L RD P E+ ++ +YGD R+QQVLAD+L ++++ AEG +
Sbjct: 978 TVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTRPAEGPIV 1037
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILK 1076
+ V P + G I H EFR+V P G+P L+Q+MF +++EGLGL + +K++K
Sbjct: 1038 LQVIPKKEHIGSGMQIAHLEFRVVHPAPGVPEALIQEMFRHGPGVSREGLGLHISQKLVK 1097
Query: 1077 LMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1098 TMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|82491942|gb|ABB77851.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1147
Score = 1174 bits (3037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1111 (52%), Positives = 767/1111 (69%), Gaps = 50/1111 (4%)
Query: 40 KAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS--VPEQQISAYLSKIQRGGHIQ 97
+ +AQ VDA+LHA FE S + FDYS SV ++ S +SA+L +QRG +IQ
Sbjct: 25 RVVAQTPVDAQLHAEFE---SSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQRGRYIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+ +F ++AYSENA EML L P +VP +++++ L +G DVRTLF S S+V L
Sbjct: 82 PFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
KA E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S
Sbjct: 142 HKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV+AE +R DL
Sbjct: 202 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSDL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +N+VRMI DC A+P+ +IQD L QP+ L GST+RAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGSTMRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIIN--------GNDEEAVGGRSTTRLWA------------ 377
GCHAQYMANMGSIASL ++V +N ++ GR +LW
Sbjct: 322 GCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGR---KLWGLVVCHHTSPRFV 378
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
FG+QLN E++LASQ E+H+LRTQTLLCDMLLRD+P GI TQSP++
Sbjct: 379 PFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNV 438
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAAL YQ + LG P+E +IK I WLL H STGLSTDSL +AGYP A+
Sbjct: 439 MDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYPGAS 498
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFL 542
LG+ VCGMA I+ + F+FWFRSHTAKEIKW GAKH P D DD G+RMHPRSSF+AFL
Sbjct: 499 ALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFRAFL 558
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELS 599
EVVK RS+PW++ EMDAIHSLQLILR S +D +A +N +++V A D+ ++QG+ EL
Sbjct: 559 EVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLLELR 618
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
V EMVRLIETATAPI AVD+ G +NGWN KVAE+TGL EA+G LV DLV + E
Sbjct: 619 IVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLV-DLVEGDSVE 677
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
++ +L+ A++G E++N EIKL+TF + V ++VNAC S+D ++ +VGVCFV QD+
Sbjct: 678 VIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQDL 737
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T K+VMDK+ IQGDY AIV +PN LIPPIF ++ C EWN AM+K+TG R D I
Sbjct: 738 TGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAID 797
Query: 780 KMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTA 836
K+L+GEVF CR+K +TK I ++ GQ+ EK F F +GKY+++LLTA
Sbjct: 798 KLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLLTA 857
Query: 837 NKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVS 896
NKR + EG+I GA CFL + SPELQ AL VQ+ E+ KEL YI QE+KNPL+G+
Sbjct: 858 NKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNGMQ 917
Query: 897 FTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVIN 956
FT LLE +DLTE+Q+QL ++ C++Q+ KI+ D DLE IE +E EF L +N
Sbjct: 918 FTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEFNLEEALN 977
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
V+ Q M L +E+ + L RD P E+ ++ +YGD R+QQVLAD+L ++++ AEG +
Sbjct: 978 TVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTRPAEGPIV 1037
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILK 1076
+ V P + G I H EFR+V P G+P L+Q+MF +++EGLGL + +K++K
Sbjct: 1038 LQVIPKKEHIGSGMQIAHLEFRVVHPAPGVPEALIQEMFRHGPGVSREGLGLHISQKLVK 1097
Query: 1077 LMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1098 TMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|77963970|gb|ABB13327.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1139
Score = 1174 bits (3036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1111 (52%), Positives = 767/1111 (69%), Gaps = 50/1111 (4%)
Query: 40 KAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS--VPEQQISAYLSKIQRGGHIQ 97
+ +AQ VDA+LHA FE S + FDYS SV ++ S +SA+L +QRG +IQ
Sbjct: 25 RVVAQTPVDAQLHAEFE---SSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQRGRYIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+ +F ++AYSENA EML L P +VP +++++ L +G DVRTLF S S+V L
Sbjct: 82 PFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
KA E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S
Sbjct: 142 HKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV+AE +R DL
Sbjct: 202 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSDL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +N+VRMI DC A+P+ +IQD L QP+ L GST+RAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGSTMRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIIN--------GNDEEAVGGRSTTRLWA------------ 377
GCHAQYMANMGSIASL ++V +N ++ GR +LW
Sbjct: 322 GCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGR---KLWGLVVCHHTSPRFV 378
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
FG+QLN E++LASQ E+H+LRTQTLLCDMLLRD+P GI TQSP++
Sbjct: 379 PFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNV 438
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAAL YQ + LG P+E +IK I WLL H STGLSTDSL +AGYP A+
Sbjct: 439 MDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYPGAS 498
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFL 542
LG+ VCGMA I+ + F+FWFRSHTAKEIKW GAKH P D DD G+RMHPRSSF+AFL
Sbjct: 499 ALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFRAFL 558
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELS 599
EVVK RS+PW++ EMDAIHSLQLILR S +D +A +N +++V A D+ ++QG+ EL
Sbjct: 559 EVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLLELR 618
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
V EMVRLIETATAPI AVD+ G +NGWN KVAE+TGL EA+G LV DLV + E
Sbjct: 619 IVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLV-DLVEGDSVE 677
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
++ +L+ A++G E++N EIKL+TF + V ++VNAC S+D ++ +VGVCFV QD+
Sbjct: 678 VIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQDL 737
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T K+VMDK+ IQGDY AIV +PN LIPPIF ++ C EWN AM+K+TG R D I
Sbjct: 738 TGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAID 797
Query: 780 KMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTA 836
K+L+GEVF CR+K +TK I ++ GQ+ EK F F +GKY+++LLTA
Sbjct: 798 KLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLLTA 857
Query: 837 NKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVS 896
NKR + EG+I GA CFL + SPELQ AL VQ+ E+ KEL YI QE+KNPL+G+
Sbjct: 858 NKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNGMQ 917
Query: 897 FTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVIN 956
FT LLE +DLTE+Q+QL ++ C++Q+ KI+ D DLE IE +E EF L +N
Sbjct: 918 FTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEFNLEEALN 977
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
V+ Q M L +E+ + L RD P E+ ++ +YGD R+QQVLAD+L ++++ AEG +
Sbjct: 978 TVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTRPAEGPIV 1037
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILK 1076
+ V P + G I H EFR+V P G+P L+Q+MF +++EGLGL + +K++K
Sbjct: 1038 LQVIPKKEHIGSGMQIAHLEFRVVHPAPGVPEALIQEMFRHGPGVSREGLGLHISQKLVK 1097
Query: 1077 LMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1098 TMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|242038093|ref|XP_002466441.1| hypothetical protein SORBIDRAFT_01g007850 [Sorghum bicolor]
gi|39980596|gb|AAR33018.1| phytochrome C [Sorghum bicolor]
gi|39980598|gb|AAR33019.1| phytochrome C [Sorghum bicolor]
gi|39980600|gb|AAR33020.1| phytochrome C [Sorghum bicolor]
gi|39980622|gb|AAR33031.1| phytochrome C [Sorghum bicolor subsp. x drummondii]
gi|241920295|gb|EER93439.1| hypothetical protein SORBIDRAFT_01g007850 [Sorghum bicolor]
Length = 1135
Score = 1172 bits (3033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/1105 (53%), Positives = 775/1105 (70%), Gaps = 43/1105 (3%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRT-MSHSVPEQQISAYLSKIQRGGHIQPFG 100
+AQ VDA+LHA FE S ++FDYS SV + SV +S Y +QRG +IQPFG
Sbjct: 26 VAQTPVDAQLHAEFESSQ---RNFDYSSSVSAAIRPSVSTSTVSTYHQTMQRGLYIQPFG 82
Query: 101 CTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKA 160
C +AV TF ++AYSENA EML L P +VP +++++ L +G DVRTLF S SSV L KA
Sbjct: 83 CLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVALHKA 142
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S KLA
Sbjct: 143 ATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSYKLA 202
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
+AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV++E +R DLEPY
Sbjct: 203 AKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDLEPY 262
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLF +N+VRMI DC AT + +IQD+ L QPL L GSTLRA HGCH
Sbjct: 263 LGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASHGCH 322
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----RLWA------------------ 377
AQYMANMGS+ASL ++V I+ ++EE V S +LW
Sbjct: 323 AQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVPFPLRY 382
Query: 378 --------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
FG+QLN E++LA+Q E+H+LRTQTLLCDMLLRD+P GI TQSP++MDLVKC
Sbjct: 383 ACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKC 442
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYYQ + LG TP+E++IK I WL H STGLSTDSL +AGYP AA L + V
Sbjct: 443 DGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALREVV 502
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSR 548
CGMA I+ +DF+FWFRSHT KEIKWGGAKH P D DD G++MHPRSSFKAFLEVVK R
Sbjct: 503 CGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVVKWR 562
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELSSVAREM 605
S+PW++ EMDAIHSLQLILR S +D +A +N +++V A D ++QG+ EL +V EM
Sbjct: 563 SVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTVTNEM 622
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAP+ AVD+ G +NGWN K AELTGL V EA+G+ L+ DLV + E+V +L
Sbjct: 623 VRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLI-DLVVVDSIEVVKRIL 681
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
AL+G E++N+EIKL+ F + + ++VN+C S+D + ++GVCFVGQD+T QK++
Sbjct: 682 DSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQKMI 741
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDK+ IQGDY AIV +P+ LIPPIF ++ C EWN AM+K+TG R D+I K+L+GE
Sbjct: 742 MDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLLIGE 801
Query: 786 VF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
VF CR+K LTK I ++ GQD EK F FD +GKY+++LLT NKR+N
Sbjct: 802 VFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKRINA 861
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG+I GA CFL +ASPELQ AL VQ+ E+ KEL YI QE++NPL+G+ FT +LL
Sbjct: 862 EGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTCNLL 921
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E ++LTE+Q++LL ++ C+ Q+ KI+ D DLESIE +E EF L +N V+ Q
Sbjct: 922 EPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVLMQG 981
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
+ L +E+ + + RD P EI + +YGD R+QQVLAD+L ++++ AEG + + V P
Sbjct: 982 IPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQVIPK 1041
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+ G I H EFR+V P G+P L+Q+MF + +++EGLGL +C+K++K M+G V
Sbjct: 1042 KENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNPEVSREGLGLYICQKLVKTMSGTV 1101
Query: 1083 QYIRESERCYFLIIFELPMPRRGSK 1107
QY+RE++ F+I+ E P+ + SK
Sbjct: 1102 QYLREADTSSFIILIEFPVAQLSSK 1126
>gi|77963968|gb|ABB13326.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1139
Score = 1171 bits (3030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/1111 (52%), Positives = 766/1111 (68%), Gaps = 50/1111 (4%)
Query: 40 KAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHS--VPEQQISAYLSKIQRGGHIQ 97
+ +AQ VDA+LHA FE S + FDYS SV ++ S +SA+L +QRG +IQ
Sbjct: 25 RVVAQTPVDAQLHAEFESSH---RHFDYSSSVSALNRSGASTSSAVSAFLQNMQRGRYIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+ +F ++AYSENA EML L P +VP +++++ L +G DVRTLF S S+V L
Sbjct: 82 PFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
KA E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S
Sbjct: 142 HKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV+AE +R DL
Sbjct: 202 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSDL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +N+VRMI DC A+P+ +I D L QP+ L GST+RAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIHDGNLSQPISLCGSTMRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIIN--------GNDEEAVGGRSTTRLWA------------ 377
GCHAQYMANMGSIASL ++V +N ++ GR +LW
Sbjct: 322 GCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGR---KLWGLVVCHHTSPRFV 378
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
FG+QLN E++LASQ E+H+LRTQTLLCDMLLRD+P GI TQSP++
Sbjct: 379 PFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNV 438
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAAL YQ + LG P+E +IK I WLL H STGLSTDSL +AGYP A+
Sbjct: 439 MDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYPGAS 498
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFL 542
LG+ VCGMA I+ + F+FWFRSHTAKEIKW GAKH P D DD G+RMHPRSSF+AFL
Sbjct: 499 ALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFRAFL 558
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELS 599
EVVK RS+PW++ EMDAIHSLQLILR S +D +A +N +++V A D+ ++QG+ EL
Sbjct: 559 EVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLLELR 618
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
V EMVRLIETATAPI AVD+ G +NGWN KVAE+TGL EA+G LV DLV + E
Sbjct: 619 IVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLV-DLVEGDSVE 677
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
++ +L+ A++G E++N EIKL+TF + V ++VNAC S+D ++ +VGVCFV QD+
Sbjct: 678 VIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQDL 737
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T K+VMDK+ IQGDY AIV +PN LIPPIF ++ C EWN AM+K+TG R D I
Sbjct: 738 TGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAID 797
Query: 780 KMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTA 836
K+L+GEVF CR+K +TK I ++ GQ+ EK F F +GKY+++LLTA
Sbjct: 798 KLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLLTA 857
Query: 837 NKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVS 896
NKR + EG+I GA CFL + SPELQ AL VQ+ E+ KEL YI QE+KNPL+G+
Sbjct: 858 NKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNGMQ 917
Query: 897 FTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVIN 956
FT LLE +DLTE+Q+QL ++ C++Q+ KI+ D DLE IE +E EF L +N
Sbjct: 918 FTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEFNLEEALN 977
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
V+ Q M L +E+ + L RD P E+ ++ +YGD R+QQVLAD+L ++++ AEG +
Sbjct: 978 TVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTRPAEGPIV 1037
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILK 1076
+ V P + G I H EFR+V P G+P L+Q+MF +++EGLGL + +K++K
Sbjct: 1038 LQVIPKKEHIGSGMRIAHLEFRVVHPAPGVPEALIQEMFRHGPGVSREGLGLHISQKLVK 1097
Query: 1077 LMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 1098 TMSGTVQYLREAESSSFIVLVEFPVAQLNSK 1128
>gi|39980624|gb|AAR33032.1| phytochrome C [Sorghum propinquum]
Length = 1135
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/1106 (53%), Positives = 774/1106 (69%), Gaps = 45/1106 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRT-MSHSVPEQQISAYLSKIQRGGHIQPFG 100
+AQ VDA+LHA FE S ++FDYS SV + SV +S Y +QRG +IQPFG
Sbjct: 26 VAQTPVDAQLHAEFESSQ---RNFDYSSSVSAAIRPSVSTSTVSTYHQTMQRGLYIQPFG 82
Query: 101 CTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKA 160
C +AV TF ++AYSENA EML L P +VP +++++ L +G DVRTLF S SSV L KA
Sbjct: 83 CLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVALHKA 142
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S KLA
Sbjct: 143 ATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSYKLA 202
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
+AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV++E +R DLEPY
Sbjct: 203 AKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDLEPY 262
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLF +N+VRMI DC AT + +IQD+ L QPL L GSTLRA HGCH
Sbjct: 263 LGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASHGCH 322
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTT------RLWA----------------- 377
AQYMANMGS+ASL ++V I+ NDEE G + +LW
Sbjct: 323 AQYMANMGSVASLVMSVTIS-NDEEEDGDPGSDQQPKGRKLWGLVVCHHTSPRFVPFPLR 381
Query: 378 ---------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
FG+QLN E++L +Q E+H+LRTQTLLCDMLLRD+P GI TQSP++MDLVK
Sbjct: 382 YACEFLLQVFGIQLNKEVELVAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVK 441
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAALYYQ + LG TP+E++IK I WL H STGLSTDSL +AGYP AA L +
Sbjct: 442 CDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALREV 501
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKS 547
VCGMA I+ +DF+FWFRSHT KEIKWGGAKH P D DD G++MHPRSSFKAFLEVVK
Sbjct: 502 VCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVVKW 561
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDLE-LQGVDELSSVARE 604
RS+PW++ EMDAIHSLQLILR S +D +A+ N +++V A L D + +QG+ EL +V E
Sbjct: 562 RSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPLDDTKKIQGLLELRTVTNE 621
Query: 605 MVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNL 664
MVRLIETATAP+ AVD+ G +NGWN K AELTGL V EA+G+ LV DLV + E+V +
Sbjct: 622 MVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLV-DLVVVDSIEVVKRI 680
Query: 665 LHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKL 724
L AL+G E++N+EIKL+ F + + ++VN+C S+D + ++GVCFVGQD+T QK+
Sbjct: 681 LDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQKM 740
Query: 725 VMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVG 784
+MDK+ IQGDY AIV +P+ LIPPIF + C EWN AM+K+TG R D+I K+L+G
Sbjct: 741 IMDKYTRIQGDYVAIVKNPSELIPPIFMISDLGSCLEWNKAMQKITGIQREDVIDKLLIG 800
Query: 785 EVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVN 841
EVF CR+K LTK I ++ GQD EK F FD +GKY+++LLT NKR+N
Sbjct: 801 EVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKRIN 860
Query: 842 MEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSL 901
EG+I GA CFL +ASPELQ AL VQ+ E+ KEL YI QE++NPL+G+ FT +L
Sbjct: 861 AEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTCNL 920
Query: 902 LEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQ 961
LE ++LTE+Q++LL ++ C+ Q+ KI+ D DLESIE +E EF L +N V+ Q
Sbjct: 921 LEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVLMQ 980
Query: 962 VMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRP 1021
+ L +E+ + + RD P EI + +YGD R+QQVLAD+L ++++ AEG + + V P
Sbjct: 981 GIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQVIP 1040
Query: 1022 TLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGE 1081
+ G I H EFR+V P G+P L+Q+MF + +++EGLGL +C+K++K M+G
Sbjct: 1041 KKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNPEVSREGLGLYICQKLVKTMSGT 1100
Query: 1082 VQYIRESERCYFLIIFELPMPRRGSK 1107
VQY+RE++ F+I+ E P+ + SK
Sbjct: 1101 VQYLREADTSSFIILIEFPVAQLSSK 1126
>gi|39980618|gb|AAR33029.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/1105 (53%), Positives = 775/1105 (70%), Gaps = 43/1105 (3%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRT-MSHSVPEQQISAYLSKIQRGGHIQPFG 100
+AQ VDA+LHA FE S ++FDYS SV + SV +S Y +QRG +IQPFG
Sbjct: 26 VAQTPVDAQLHAEFESSQ---RNFDYSSSVSAAIRPSVSTSTVSTYHQTMQRGLYIQPFG 82
Query: 101 CTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKA 160
C +AV TF ++AYSENA EML L P +VP +++++ L +G DVRTLF S SSV L KA
Sbjct: 83 CLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVALHKA 142
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S KLA
Sbjct: 143 ATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSYKLA 202
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
+AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV++E +R DLEPY
Sbjct: 203 AKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDLEPY 262
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLF +N+VRMI DC AT + +IQD+ L QPL L GSTLRA HGCH
Sbjct: 263 LGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASHGCH 322
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----RLWA------------------ 377
AQYMANMGS+ASL ++V I+ ++EE V S +LW
Sbjct: 323 AQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVPFPLRY 382
Query: 378 --------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
FG+QLN E++LA+Q E+H+LRTQTLLCDMLLRD+P GI TQSP++MDLVKC
Sbjct: 383 ACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKC 442
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYYQ + LG TP+E++IK I WL H STGLSTDSL +AGYP AA L + V
Sbjct: 443 DGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALREVV 502
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSR 548
CGMA I+ +DF+FWFRSHT KEIKWGGAKH P D DD G++MHPRSSFKAFLEVVK R
Sbjct: 503 CGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVVKWR 562
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELSSVAREM 605
S+PW++ E+DAIHSLQLILR S +D +A +N +++V A D ++QG+ EL +V EM
Sbjct: 563 SVPWEDVEIDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTVTNEM 622
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAP+ AVD+ G +NGWN K AELTGL V EA+G+ L+ DLV + E+V +L
Sbjct: 623 VRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLI-DLVVVDSIEVVKRIL 681
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
AL+G E++N+EIKL+ F + + ++VN+C S+D + ++GVCFVGQD+T QK++
Sbjct: 682 DSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQKMI 741
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDK+ IQGDY AIV +P+ LIPPIF ++ C EWN AM+K+TG R D+I K+L+GE
Sbjct: 742 MDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLLIGE 801
Query: 786 VF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
VF CR+K LTK I ++ GQD EK F FD +GKY+++LLT NKR+N
Sbjct: 802 VFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKRINA 861
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG+I GA CFL +ASPELQ AL VQ+ E+ KEL YI QE++NPL+G+ FT +LL
Sbjct: 862 EGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTCNLL 921
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E ++LTE+Q++LL ++ C+ Q+ KI+ D DLESIE +E EF L +N V+ Q
Sbjct: 922 EPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVLMQG 981
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
+ L +E+ + + RD P EI + +YGD R+QQVLAD+L ++++ AEG + + V P
Sbjct: 982 IPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQVIPK 1041
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+ G I H EFR+V P G+P L+Q+MF + +++EGLGL +C+K++K M+G V
Sbjct: 1042 KENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNPEVSREGLGLYICQKLVKTMSGTV 1101
Query: 1083 QYIRESERCYFLIIFELPMPRRGSK 1107
QY+RE++ F+I+ E P+ + SK
Sbjct: 1102 QYLREADTSSFIILIEFPVAQLSSK 1126
>gi|130185|sp|P06592.1|PHYA_CUCPE RecName: Full=Phytochrome A
gi|167501|gb|AAA33115.1| phytochrome [Cucurbita pepo]
gi|225435|prf||1303260A phytochrome
Length = 1124
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/1101 (53%), Positives = 764/1101 (69%), Gaps = 45/1101 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ------ISAYLSKIQR 92
++ IAQ +VDA + A FE ESG SFDYS SVR S +QQ +AYL IQ+
Sbjct: 20 TRIIAQTSVDANVQADFE---ESGNSFDYSSSVRVTSDVSGDQQPRSDKVTTAYLHHIQK 76
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSS 152
G IQPFGC +A+D+ TF+VIAYSENA EML + +VP++ +L IGTDVRT+FT+
Sbjct: 77 GKLIQPFGCLLALDDKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAP 136
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+ L KA G E+TLLNPI +H K +GKPFYAI+HRV ++ID EP + + ++ AG
Sbjct: 137 SASALLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEGPVTAAG 196
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AI++LQSLP G + LCDT+V+ V +LTGYDRVM Y+FH+D+HGEV++E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEV 256
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P L+PY GLHYPATDIPQA+RFLF +N+VRMIVDC A L V+QDE L L L GST
Sbjct: 257 AKPGLQPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGST 316
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEE----AVGGRSTTRLWA----------- 377
LRAPH CH QYM NM SIASL +AV++N DEE A+ + RLW
Sbjct: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNEGDEENEGPALQQQKRKRLWGLVVCHNSSPRF 376
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
F + +N EL+L +Q+ EK++LRTQTLLCDML+RD+P GIV++SP+
Sbjct: 377 VPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPN 436
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVK DGAAL Y+ K + LG+TP + Q+ DI WL YH DSTGLSTDSL DAGYP A
Sbjct: 437 IMDLVKSDGAALLYKKKIWRLGLTPNDFQLLDIASWLSEYHMDSTGLSTDSLYDAGYPGA 496
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
LGD VCGMA IT D +FWFRSHTA EI+WGGAKH KDD ++MHPRSSFKAFL
Sbjct: 497 IALGDEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAKHEHGQKDDARKMHPRSSFKAFL 556
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSV 601
EVVK+RSLPW + EMDAIHSLQLILR++F+D +A+ ++ + L DL+++G EL SV
Sbjct: 557 EVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDATEINRKSIQTTLGDLKIEGRQELESV 616
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRLIETAT PI AVD+ G +NGWN K+AELTGL V++A+GK L+ LV E+V
Sbjct: 617 TSEMVRLIETATVPILAVDLDGLINGWNTKIAELTGLPVDKAIGKHLL-TLVEDSSVEVV 675
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L AL+G+E++NV+ +++T G+ ++ +VVNAC+S+D N+VGV FV QD+T
Sbjct: 676 RKMLFLALQGQEEQNVQFEIKTHGSHIEVGSISLVVNACASRDLRENVVGVFFVAQDITG 735
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
QK+VMDKF ++GDYKAIV +PNPLIPPIF SDE CSEWN AM KLTGWSR ++I KM
Sbjct: 736 QKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCSEWNPAMAKLTGWSREEVIDKM 795
Query: 782 LVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVFG SCCRLK +A I L+NA GQD EK F RNG YV+ LL NK
Sbjct: 796 LLGEVFGVHKSCCRLKNQEAFVNLGIVLNNAMCGQDPEKASFGFLARNGMYVECLLCVNK 855
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
++ +G + G FCFLQ+ S ELQQAL +QR E+ RL+ L YI ++I+NPLSG+ F+
Sbjct: 856 ILDKDGAVTGFFCFLQLPSHELQQALNIQRLCEQTALKRLRALGYIKRQIQNPLSGIIFS 915
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
LLE T+L +QK+LL TS C+KQ+ K++ + D++ I DG ++ E EF L V+
Sbjct: 916 RRLLERTELGVEQKELLRTSGLCQKQISKVLDESDIDKIIDGFIDLEMDEFTLHEVLMVS 975
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
+SQVM+ ++ + +Q++ + PEE + +YGD R+QQVLADFLL V Y+PS G + I
Sbjct: 976 ISQVMLKIKGKGIQIVNETPEEAMSETLYGDSLRLQQVLADFLLISVSYAPSG-GQLTIS 1034
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
T Q + +VH EFR+ G G+P L+ +MF S ++EG L + RK++KLM
Sbjct: 1035 TDVTKNQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGSEEDASEEGFSLLISRKLVKLM 1094
Query: 1079 NGEVQYIRESERCYFLIIFEL 1099
NG+V+Y+RE+ + F+I EL
Sbjct: 1095 NGDVRYMREAGKSSFIITVEL 1115
>gi|39980606|gb|AAR33023.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980608|gb|AAR33024.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980610|gb|AAR33025.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1170 bits (3027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/1105 (53%), Positives = 774/1105 (70%), Gaps = 43/1105 (3%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRT-MSHSVPEQQISAYLSKIQRGGHIQPFG 100
+AQ VDA+LHA FE S ++FDYS SV + SV +S Y +QRG +IQPFG
Sbjct: 26 VAQTPVDAQLHAEFESSQ---RNFDYSSSVSAAIRPSVSTSTVSTYHQTMQRGLYIQPFG 82
Query: 101 CTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKA 160
C +AV TF ++AYSENA EML L P +VP +++++ L +G DVRTLF S SSV L KA
Sbjct: 83 CLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVALHKA 142
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S KLA
Sbjct: 143 ATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSYKLA 202
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
+AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV++E +R DLEPY
Sbjct: 203 AKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDLEPY 262
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLF +N+VRMI DC AT + +IQD+ L QPL L GSTLRA HGCH
Sbjct: 263 LGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASHGCH 322
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----RLWA------------------ 377
AQYMANMGS+ASL ++V I+ ++EE V S +LW
Sbjct: 323 AQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVICHHTSPRFVPFPLRY 382
Query: 378 --------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
FG+QLN E++LA+Q E+H+LRTQTLLCDMLLRD+P GI TQSP++ DLVKC
Sbjct: 383 ACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVTDLVKC 442
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYYQ + LG TP+E++IK I WL H STGLSTDSL +AGYP AA L + V
Sbjct: 443 DGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALREVV 502
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSR 548
CGMA I+ +DF+FWFRSHT KEIKWGGAKH P D DD G++MHPRSSFKAFLEVVK R
Sbjct: 503 CGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVVKWR 562
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELSSVAREM 605
S+PW++ EMDAIHSLQLILR S +D +A +N +++V A D ++QG+ EL +V EM
Sbjct: 563 SVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTVTNEM 622
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAP+ AVD+ G +NGWN K AELTGL V EA+G+ L+ DLV + E+V +L
Sbjct: 623 VRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLI-DLVVVDSIEVVKRIL 681
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
AL+G E++N+EIKL+ F + + ++VN+C S+D + ++GVCFVGQD+T QK++
Sbjct: 682 DSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQKMI 741
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDK+ IQGDY AIV +P+ LIPPIF ++ C EWN AM+K+TG R D+I K+L+GE
Sbjct: 742 MDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLLIGE 801
Query: 786 VF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
VF CR+K LTK I ++ GQD EK F FD +GKY+++LLT NKR+N
Sbjct: 802 VFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKRINA 861
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG+I GA CFL +ASPELQ AL VQ+ E+ KEL YI QE++NPL+G+ FT +LL
Sbjct: 862 EGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTCNLL 921
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E ++LTE+Q++LL ++ C+ Q+ KI+ D DLESIE +E EF L +N V+ Q
Sbjct: 922 EPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVLMQG 981
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
+ L +E+ + + RD P EI + +YGD R+QQVLAD+L ++++ AEG + + V P
Sbjct: 982 IPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQVIPK 1041
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+ G I H EFR+V P G+P L+Q+MF + +++EGLGL +C+K++K M+G V
Sbjct: 1042 KENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNPEVSREGLGLYICQKLVKTMSGTV 1101
Query: 1083 QYIRESERCYFLIIFELPMPRRGSK 1107
QY+RE++ F+I+ E P+ + SK
Sbjct: 1102 QYLREADTSSFIILIEFPVAQLSSK 1126
>gi|39980620|gb|AAR33030.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1170 bits (3027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/1105 (53%), Positives = 774/1105 (70%), Gaps = 43/1105 (3%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRT-MSHSVPEQQISAYLSKIQRGGHIQPFG 100
+AQ VDA+LHA FE S ++FDYS SV + SV +S Y +QRG +IQPFG
Sbjct: 26 VAQTPVDAQLHAEFESSQ---RNFDYSSSVSAAIRPSVSTSTVSTYHQTMQRGLYIQPFG 82
Query: 101 CTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKA 160
C +AV TF ++AYSENA EML L P +VP +++++ L +G DVRTLF S SSV L KA
Sbjct: 83 CLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVALHKA 142
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S KLA
Sbjct: 143 ATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSYKLA 202
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
+AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV++E +R DLEPY
Sbjct: 203 AKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDLEPY 262
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLF +N+VRMI DC AT + +IQD+ L QPL L GSTLRA HGCH
Sbjct: 263 LGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASHGCH 322
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----RLWA------------------ 377
AQYMANMGS+ASL ++V I+ ++EE V S +LW
Sbjct: 323 AQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVPFPLRY 382
Query: 378 --------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
FG+QLN E++LA+Q E+H+LRTQTLLCDMLLRD+P GI TQSP++ DLVKC
Sbjct: 383 ACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVTDLVKC 442
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYYQ + LG TP+E++IK I WL H STGLSTDSL +AGYP AA L + V
Sbjct: 443 DGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALREVV 502
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSR 548
CGMA I+ +DF+FWFRSHT KEIKWGGAKH P D DD G++MHPRSSFKAFLEVVK R
Sbjct: 503 CGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVVKWR 562
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELSSVAREM 605
S+PW++ EMDAIHSLQLILR S +D +A +N +++V A D ++QG+ EL +V EM
Sbjct: 563 SVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTVTNEM 622
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAP+ AVD+ G +NGWN K AELTGL V EA+G+ L+ DLV + E+V +L
Sbjct: 623 VRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLI-DLVVVDSIEVVKRIL 681
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
AL+G E++N+EIKL+ F + + ++VN+C S+D + ++GVCFVGQD+T QK++
Sbjct: 682 DSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQKMI 741
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDK+ IQGDY AIV +P+ LIPPIF ++ C EWN AM+K+TG R D+I K+L+GE
Sbjct: 742 MDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLLIGE 801
Query: 786 VF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
VF CR+K LTK I ++ GQD EK F FD +GKY+++LLT NKR+N
Sbjct: 802 VFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKRINA 861
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG+I GA CFL +ASPELQ AL VQ+ E+ KEL YI QE++NPL+G+ FT +LL
Sbjct: 862 EGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTCNLL 921
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E ++LTE+Q++LL ++ C+ Q+ KI+ D DLESIE +E EF L +N V+ Q
Sbjct: 922 EPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVLMQG 981
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
+ L +E+ + + RD P EI + +YGD R+QQVLAD+L ++++ AEG + + V P
Sbjct: 982 IPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQVIPK 1041
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+ G I H EFR+V P G+P L+Q+MF + +++EGLGL +C+K++K M+G V
Sbjct: 1042 KENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNPEVSREGLGLYICQKLVKTMSGTV 1101
Query: 1083 QYIRESERCYFLIIFELPMPRRGSK 1107
QY+RE++ F+I+ E P+ + SK
Sbjct: 1102 QYLREADTSSFIILIEFPVAQLSSK 1126
>gi|297849258|ref|XP_002892510.1| hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp.
lyrata]
gi|297338352|gb|EFH68769.1| hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp.
lyrata]
Length = 1122
Score = 1170 bits (3027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/1123 (52%), Positives = 788/1123 (70%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIIHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ++T
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDASTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMLEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL+Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA +LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HMDSTGLSTDSLHDAGFPKALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D+E ++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTN 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
V++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGLSV+
Sbjct: 599 VIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L+NA QD EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+++L+TSA C+KQ+ KI+ D DLESI
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ A SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKEQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
>gi|39980612|gb|AAR33026.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980614|gb|AAR33027.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980616|gb|AAR33028.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1169 bits (3023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/1099 (53%), Positives = 772/1099 (70%), Gaps = 43/1099 (3%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRT-MSHSVPEQQISAYLSKIQRGGHIQPFG 100
+AQ VDA+LHA FE S ++FDYS SV + SV +S Y +QRG +IQPFG
Sbjct: 26 VAQTPVDAQLHAEFESSQ---RNFDYSSSVSAAIRPSVSTSTVSTYHQTMQRGLYIQPFG 82
Query: 101 CTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKA 160
C +AV TF ++AYSENA EML L P +VP +++++ L +G DVRTLF S SSV L KA
Sbjct: 83 CLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVALHKA 142
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S KLA
Sbjct: 143 ATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSYKLA 202
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
+AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV++E +R DLEPY
Sbjct: 203 AKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDLEPY 262
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLF +N+VRMI DC AT + +IQD+ L QPL L GSTLRA HGCH
Sbjct: 263 LGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASHGCH 322
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----RLWA------------------ 377
AQYMANMGS+ASL ++V I+ ++EE V S +LW
Sbjct: 323 AQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVPFPLRY 382
Query: 378 --------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
FG+QLN E++LA+Q E+H+LRTQTLLCDMLLRD+P GI TQSP++MDLVKC
Sbjct: 383 ACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKC 442
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYYQ + LG TP+E++IK I WL H STGLSTDSL +AGYP AA L + V
Sbjct: 443 DGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALREVV 502
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSR 548
CGMA I+ +DF+FWFRSHT KEIKWGGAKH P D DD G++MHPRSSFKAFLEVVK R
Sbjct: 503 CGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVVKWR 562
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELSSVAREM 605
S+PW++ EMDAIHSLQLILR S +D +A +N +++V A D ++QG+ EL +V EM
Sbjct: 563 SVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTVTNEM 622
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAP+ AVD+ G +NGWN K AELTGL V EA+G+ L+ DLV + E+V +L
Sbjct: 623 VRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLI-DLVVVDSIEVVKRIL 681
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
AL+G E++N+EIKL+ F + + ++VN+C S+D + ++GVCFVGQD+T QK++
Sbjct: 682 DSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQKMI 741
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDK+ IQGDY AIV +P+ LIPPIF ++ C EWN AM+K+TG R D+I K+L+GE
Sbjct: 742 MDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLLIGE 801
Query: 786 VF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
VF CR+K LTK I ++ GQD EK F FD +GKY+++LLT NKR+N
Sbjct: 802 VFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKRINA 861
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG+I GA CFL +ASPELQ AL VQ+ E+ KEL YI QE++NPL+G+ FT +LL
Sbjct: 862 EGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTCNLL 921
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E ++LTE+Q++LL ++ C+ Q+ KI+ D DLESIE +E EF L +N V+ Q
Sbjct: 922 EPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVLMQG 981
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
+ L +E+ + + RD P EI + +YGD R+QQVLAD+L ++++ AEG + + V P
Sbjct: 982 IPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQVIPK 1041
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+ G I H EFR+V P G+P L+Q+MF + +++EGLGL +C+K++K M+G V
Sbjct: 1042 KENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNPEVSREGLGLYICQKLVKTMSGTV 1101
Query: 1083 QYIRESERCYFLIIFELPM 1101
QY+RE++ F+I+ E P+
Sbjct: 1102 QYLREADTSSFIILIEFPV 1120
>gi|15217562|ref|NP_172428.1| phytochrome A [Arabidopsis thaliana]
gi|6093714|sp|P14712.2|PHYA_ARATH RecName: Full=Phytochrome A; AltName: Full=Protein ELONGATED
HYPOCOTYL 8; AltName: Full=Protein FAR RED ELONGATED 1;
AltName: Full=Protein FAR RED ELONGATED HYPOCOTYL 2
gi|404670|gb|AAA21351.1| phytochrome A [Arabidopsis thaliana]
gi|3482934|gb|AAC33219.1| phytochrome A [Arabidopsis thaliana]
gi|14517372|gb|AAK62577.1| At1g09570/F14J9_27 [Arabidopsis thaliana]
gi|332190341|gb|AEE28462.1| phytochrome A [Arabidopsis thaliana]
Length = 1122
Score = 1169 bits (3023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/1123 (52%), Positives = 785/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H + + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
+ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E +TT
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D+E ++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTK 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
V+ ++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGLSV+
Sbjct: 599 VIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK + LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHFL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L+NA QD EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+++L+TSA C+KQ+ KI+ D DLESI
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ A SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMAVNFTPSGG---QLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
>gi|225450405|ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
gi|147838424|emb|CAN76586.1| hypothetical protein VITISV_020287 [Vitis vinifera]
gi|183239014|gb|ACC60965.1| phytochrome A [Vitis vinifera]
gi|296089871|emb|CBI39690.3| unnamed protein product [Vitis vinifera]
Length = 1124
Score = 1168 bits (3021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/1105 (52%), Positives = 777/1105 (70%), Gaps = 43/1105 (3%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVP--EQQISAYLSKIQRGGHI 96
++ IAQ TVDA+LHA FE+SG S + P ++ +AYL IQ+G I
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGKLI 79
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFG +A+DE TF+VIAYSENA EML + +VP++ + +L IGTDVRT+F+ S+
Sbjct: 80 QPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSASA 139
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQS 216
L KA G E++LLNPI +H K +GKPFYAI+HRV ++ID EP + + ++ AGA+QS
Sbjct: 140 LHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQS 199
Query: 217 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPD 276
KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FH+D+HGEVV+E +P
Sbjct: 200 YKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPG 259
Query: 277 LEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAP 336
LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + V+QDE L L L GSTLRAP
Sbjct: 260 LEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAP 319
Query: 337 HGCHAQYMANMGSIASLALAVIINGNDEEAVGGRS-----TTRLWA-------------- 377
H CH QYM NM SIASL +AV++N DEE S RLW
Sbjct: 320 HSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPF 379
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
F + +N EL+L SQ+ EK++LRTQTLLCDML+RD+P GIV+QSP++MD
Sbjct: 380 PLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMD 439
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAAL Y+ K + LG+TP++ Q+ DI WL YH DSTGLSTDSL DAGYP A L
Sbjct: 440 LVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALAL 499
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA IT +D LFWFRSHTA E++WGGAKH P +KDDG++MHPRSSFKAFLEVV
Sbjct: 500 GDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVV 559
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSVARE 604
K+RSLPW + EMDAIHSLQLILR++F+D+EA + + ++ +L DL+++G+ EL +V E
Sbjct: 560 KTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTSE 619
Query: 605 MVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNL 664
MVRLIETA+ PI AVDV G VNGWN K++ELT L V++A+G L+ LV + V +
Sbjct: 620 MVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLL-TLVEDSSADTVKKM 678
Query: 665 LHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKL 724
LH AL+G+E++NV+ +++T G++ + +VVNAC+S+D N+VGVCFV QD+T QK
Sbjct: 679 LHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHENVVGVCFVAQDITSQKT 738
Query: 725 VMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVG 784
VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN AM KL+GW+R +++ KML+G
Sbjct: 739 VMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLG 798
Query: 785 EVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVN 841
EVFG+ CCRLK +A I L++ G+++EK F F ++GKYV+ LL+ +K+++
Sbjct: 799 EVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKLD 858
Query: 842 MEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSL 901
EG + G FCFLQ+AS ELQQAL +QR E+ RLK LAYI ++IKNPLSG+ F+ +
Sbjct: 859 REGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRKM 918
Query: 902 LEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQ 961
+E TDL E+Q+Q+L TSA C++Q+ KI+ D DL+SI +G L+ E EF L V+ A +SQ
Sbjct: 919 MEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLVASISQ 978
Query: 962 VMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRP 1021
VM+ + +Q++ D E I T +YGD R+QQVLADFLL V ++P G ++ V
Sbjct: 979 VMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTP---GGGQLSVAA 1035
Query: 1022 TLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMN 1079
+L + G+++ VH E R+ G G+P +L+ MF ++ ++EG+ L + RK++KLMN
Sbjct: 1036 SLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLISRKLVKLMN 1095
Query: 1080 GEVQYIRESERCYFLIIFELPMPRR 1104
G+VQY+RE+ + F+I EL R+
Sbjct: 1096 GDVQYLREAGKSTFIISIELAAARK 1120
>gi|449453752|ref|XP_004144620.1| PREDICTED: phytochrome C-like [Cucumis sativus]
Length = 1119
Score = 1168 bits (3021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1115 (52%), Positives = 765/1115 (68%), Gaps = 47/1115 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV----RTMSH 76
S TS R+ H A +AQ +DA+LH FE S + FDYS SV +
Sbjct: 12 SKTSFDRSKHGA-------HVVAQTPIDAKLHVDFEGSE---RLFDYSASVDFNAACSTS 61
Query: 77 SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ 136
+V + +YL IQRG +QPFGC IAVD V+AYSENA EML LAP +VPN+E+Q
Sbjct: 62 NVHASTVQSYLLNIQRGSLVQPFGCMIAVDGENLSVLAYSENAPEMLDLAPHAVPNIEQQ 121
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
E LT GTDVRTLF S + L+KA +E+ LLNPI +H + +GKPFYAILHRVDVG++I
Sbjct: 122 EALTFGTDVRTLFRSPGAAALQKAADFKEVNLLNPILVHCRTSGKPFYAILHRVDVGLII 181
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
DLEP D ++ AGA++S KLA +AIS+LQ+L G+I LLC+ +V+ V LTGYDRVM
Sbjct: 182 DLEPVNPADVPVTAAGALKSYKLAAKAISKLQNLQSGNISLLCEVLVKEVSDLTGYDRVM 241
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
VY+FH+DEHGEVVAE R DLEPYFGLHYPATDIPQASRFLF +N+VRMI DC A P+ V
Sbjct: 242 VYKFHDDEHGEVVAECCRSDLEPYFGLHYPATDIPQASRFLFLKNKVRMICDCLAPPVKV 301
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-L 375
+QD L QPL L GS LRAPHGCHA+YM NMGSIASL +++ IN ND E+ + R L
Sbjct: 302 LQDRRLAQPLSLCGSALRAPHGCHARYMMNMGSIASLVMSITINENDSESENDQEKDRKL 361
Query: 376 WA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 409
W FG+Q+N E++L +QL EKH+LR QT+LCDMLL
Sbjct: 362 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELQAQLKEKHILRIQTVLCDMLL 421
Query: 410 RDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGL 469
RD+P GIVTQSP+IMDLVKCDGAALY++ K++ LGVTPTE QI++I +WLL H STGL
Sbjct: 422 RDAPVGIVTQSPNIMDLVKCDGAALYFRKKFWSLGVTPTEAQIRNIADWLLKDHSGSTGL 481
Query: 470 STDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 529
STDSL +AG+ A+ LGD +CGMA IT +DFLFWFRSH AKEI+WGGAKH P D+DDG
Sbjct: 482 STDSLTEAGFYGASALGDEICGMAAVRITSKDFLFWFRSHMAKEIRWGGAKHDPSDEDDG 541
Query: 530 QRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVD 589
++MHPRSSFKAFLEVVK RS PW++ EMDAIHSLQLILR S +D K + VD
Sbjct: 542 RKMHPRSSFKAFLEVVKRRSQPWEDVEMDAIHSLQLILRGSLQDEIEEECKVITTVPPVD 601
Query: 590 LELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLV 649
+ Q +DEL + EMVRLIETA PI AVDV G +NGWN+K ELTGL+++EA+G LV
Sbjct: 602 EKTQQLDELRVITNEMVRLIETAAVPILAVDVFGKINGWNSKATELTGLAIQEAIGMPLV 661
Query: 650 HDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNI 709
D V + ++V +L A++G E+KNVEIKL+TFG + V + VN+C S+D NN+
Sbjct: 662 -DCVVNDSVKVVKKMLSLAIQGIEEKNVEIKLKTFGTAVQNGPVILEVNSCCSRDLNNNV 720
Query: 710 VGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKL 769
VG+ F+GQDVT QKLVM+++ IQGDY I+ +P+ LIPPIF +D C EWN AMEKL
Sbjct: 721 VGISFIGQDVTKQKLVMNQYTQIQGDYTGIMRNPSALIPPIFMADGEGRCLEWNDAMEKL 780
Query: 770 TGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRN 826
+G+ R ++ +ML+GEVF CR+K LTK I LH GQDTEKF F DR
Sbjct: 781 SGFRRVEMTNRMLLGEVFTLENFGCRVKD-HTLTKLRIILHRVISGQDTEKFLFRFCDRE 839
Query: 827 GKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQ 886
G YV++LLTA+KR + EG + G F FL +ASPELQ AL +QR E+ L +LAY+ Q
Sbjct: 840 GNYVESLLTASKRTDTEGTVTGVFFFLHVASPELQYALEMQRISEQATAENLHKLAYLRQ 899
Query: 887 EIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEK 946
EI+ PL G++ +L+ ++DL+ +QKQL++ + +Q+ KI+ D D++SIE+ +E
Sbjct: 900 EIRKPLDGIALMQNLISSSDLSIEQKQLIKLNTLSREQLHKIVHDTDIQSIEECYMETNC 959
Query: 947 AEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVR 1006
+EF LG V++ V +Q M L +ER +++I + ++ +L +YGD R+QQVL++FL N +
Sbjct: 960 SEFNLGDVLDVVTNQTMTLSQEREVKIICESLADVSSLHLYGDNLRLQQVLSEFLTNTLL 1019
Query: 1007 YSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGL 1066
++ E V P ++ +G IVH E R+ P G+P L+Q+MF + ++EGL
Sbjct: 1020 FT-CKESSVIFKATPRKERIGKGIHIVHLELRITHPTPGIPAHLIQEMFDDNNDSSKEGL 1078
Query: 1067 GLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
GL + +K++K+MNG VQY+RE+E F+I+ E P+
Sbjct: 1079 GLYISQKLVKIMNGTVQYLREAETSSFIILIEFPL 1113
>gi|39980602|gb|AAR33021.1| phytochrome C [Sorghum bicolor]
gi|39980604|gb|AAR33022.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 1168 bits (3021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/1105 (53%), Positives = 773/1105 (69%), Gaps = 43/1105 (3%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRT-MSHSVPEQQISAYLSKIQRGGHIQPFG 100
+AQ VDA+LHA FE S ++FDYS SV + SV +S Y +QRG +IQPFG
Sbjct: 26 VAQTPVDAQLHAEFESSQ---RNFDYSSSVSAAIRPSVSTSTVSTYHQTMQRGLYIQPFG 82
Query: 101 CTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKA 160
C +AV TF ++AYSENA EML L P +VP +++++ L +G DVRTLF S SSV L KA
Sbjct: 83 CLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVALHKA 142
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
E+ LLNPI +H++ + KPFYAILHR+DVG+VIDLEP D + AGA++S KLA
Sbjct: 143 ATFGEVNLLNPILVHARTSRKPFYAILHRIDVGLVIDLEPVNPVDVPATAAGALKSYKLA 202
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
+AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV++E +R DLEPY
Sbjct: 203 AKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDLEPY 262
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLF +N+VRMI DC AT + +IQD+ L QPL L GSTLRA HGCH
Sbjct: 263 LGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASHGCH 322
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----RLWA------------------ 377
AQYMANMGS+ASL ++V I+ ++EE V S +LW
Sbjct: 323 AQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVPFPLRY 382
Query: 378 --------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
FG+QLN E++LA+Q E+H+LRTQTLLCDMLLRD+P GI TQSP++MDLVKC
Sbjct: 383 ACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKC 442
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYYQ + LG TP+E++IK I WL H STGLSTDSL +AGYP AA L + V
Sbjct: 443 DGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALREVV 502
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSR 548
CGMA I+ +DF+FWFRSHT KEIKWGGAKH P D DD G++MHPRSSFKAFLEVVK R
Sbjct: 503 CGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVVKWR 562
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELSSVAREM 605
S+PW++ EMDAIHSLQLILR S +D +A +N +++V A D ++QG+ EL +V EM
Sbjct: 563 SVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTVTNEM 622
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAP+ AVD+ G +NGWN K AELTGL V EA+G+ L+ DLV + E+V +L
Sbjct: 623 VRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLI-DLVVVDSIEVVKRIL 681
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
AL+G E++N+EIKL+ F + + ++VN+C S+D + ++GVCFVGQD+T QK++
Sbjct: 682 DSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQKMI 741
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDK+ IQGDY AIV +P+ LIPPIF ++ C EWN AM+K+TG R D+I K+L+GE
Sbjct: 742 MDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLLIGE 801
Query: 786 VF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
VF CR+K LTK I ++ GQD EK F FD +GKY+++LLT NKR+N
Sbjct: 802 VFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKRINA 861
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG+I GA CFL +ASPELQ AL VQ+ E+ KEL YI QE++NPL+G+ FT +LL
Sbjct: 862 EGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTCNLL 921
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E ++LTE+Q++LL ++ C+ Q+ KI+ D DLESIE +E EF L +N V+ Q
Sbjct: 922 EPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVLMQG 981
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
+ L +E+ + + RD P EI + +YGD R+QQVLAD+L ++++ AEG + + V P
Sbjct: 982 IPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQVIPK 1041
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+ G I H EFR+V P G+P L+Q+MF + +++EGLGL +C+K++K M+G V
Sbjct: 1042 KENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNPEVSREGLGLYICQKLVKTMSGTV 1101
Query: 1083 QYIRESERCYFLIIFELPMPRRGSK 1107
QY+RE++ F+I+ E P+ + SK
Sbjct: 1102 QYLREADTSSFIILIEFPVAQLSSK 1126
>gi|297740631|emb|CBI30813.3| unnamed protein product [Vitis vinifera]
Length = 877
Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/871 (64%), Positives = 684/871 (78%), Gaps = 20/871 (2%)
Query: 256 MVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLC 315
MVY+FH+D+HGEVV+E +R DLEPY GLHYPATDIPQA+RFLFKQNRVR+I DC+A +
Sbjct: 1 MVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVR 60
Query: 316 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG-----R 370
VIQ E L QPLCLV STLR+PHGCH QYM NMG IASLA+AV+INGND + G
Sbjct: 61 VIQSEELKQPLCLVNSTLRSPHGCHLQYMFNMGCIASLAMAVVINGNDATKLWGLVVCHH 120
Query: 371 STTR-------------LWAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIV 417
++ R + AFGLQL MELQLASQL+EK +LR QTLLCDMLLR++P GIV
Sbjct: 121 TSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIV 180
Query: 418 TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADA 477
T SPSIMDL+KCDGAALYY G+ + LGVTPTE+Q+KDI EWLLT HGDSTGLSTDSLADA
Sbjct: 181 THSPSIMDLLKCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADA 240
Query: 478 GYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 537
GYP AA LGDAVCGMA A IT +DFL WFRSHTAKE+KWGGAKHHPEDKDDG RMHPRSS
Sbjct: 241 GYPGAALLGDAVCGMATARITSKDFLLWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSS 300
Query: 538 FKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDE 597
FKAFLEVVKSRSLPW+ ++++AIHSLQLI+RDSF+D E S+ K +V+ Q D E+QG++E
Sbjct: 301 FKAFLEVVKSRSLPWEVSDINAIHSLQLIMRDSFQDIEDSSGKVMVHTQKYDSEMQGLNE 360
Query: 598 LSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEY 657
L SVA EMV+LIETATAPIF VD GC+NGWNAK+AELTGL +EAMGKSLV ++V+++
Sbjct: 361 LGSVACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTGLQAKEAMGKSLVDEIVHEDL 420
Query: 658 EEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQ 717
VDNLL AL+G+EDKNVE+KL+ FG + A+++VVNAC+S+DYTN+IVGVCFVGQ
Sbjct: 421 RGAVDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACTSRDYTNDIVGVCFVGQ 480
Query: 718 DVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDI 777
D+T +K+VMDKFI +QGDYKAIV NPLIPPIFASD N CCSEWNT++EKLTG R ++
Sbjct: 481 DITSEKIVMDKFIRLQGDYKAIVQCLNPLIPPIFASDGNACCSEWNTSLEKLTGCMRHEV 540
Query: 778 IGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
I KML GEVFG C LK D LT+F I L+ A GQDTEKFPF FD++GK V+ LLTAN
Sbjct: 541 IRKMLPGEVFGGLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTAN 600
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
KR + G ++G FCFLQI +P+ Q L + ++CF++ KELAYI QE+KNPL+G+ F
Sbjct: 601 KRTDANGNVIGCFCFLQIDTPDKHQGLG-HGPEYRECFSKFKELAYIRQEMKNPLNGIRF 659
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
T+ LLE T + QKQ LETS ACE+QM+ II D+D+ IE+GS+E EFLLG+V++A
Sbjct: 660 THKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEGSMELNVEEFLLGNVLDA 719
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
VVSQVMMLL+E+ LQL+ +IPEEIKTL + GDQ ++QQVL+DFL N+V ++PS++GW+EI
Sbjct: 720 VVSQVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSDFLHNIVHHAPSSDGWIEI 779
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSS-RWMTQEGLGLSMCRKILK 1076
+ LK + VH +FRM G+GLPP+L+QDMF +W TQEGLGL++ RK+L
Sbjct: 780 KISTGLKMIQDFNEFVHLQFRMTHIGQGLPPDLIQDMFEGGDQWNTQEGLGLNLSRKLLS 839
Query: 1077 LMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
MNG VQY+RE +CYFL+ +L R K
Sbjct: 840 AMNGRVQYVREHGKCYFLVDIDLKNRRAREK 870
>gi|224122788|ref|XP_002318913.1| phytochrome [Populus trichocarpa]
gi|222857289|gb|EEE94836.1| phytochrome [Populus trichocarpa]
Length = 1126
Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/1107 (52%), Positives = 770/1107 (69%), Gaps = 40/1107 (3%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVP---EQQISAYLSKIQRGGH 95
++ IAQ TVDA+LHA FE+SG S + ++ P ++ + YL IQ+G
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTTYLHHIQKGKL 79
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +A+DE TF+V+AYSENA E+L + +VP++ + +L IGTD+RT+FT+ S+
Sbjct: 80 IQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
L+KA G +++LLNPI +H K +GKPFYAI+HRV ++ID EP + + ++ AGA+Q
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR M Y+FH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDE-----EAVGGRSTTRLWA------------- 377
PH CH QYM NM SIASL +AV++N DE ++V + RLW
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPRFVP 379
Query: 378 -------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIM 424
F + +N EL+L +Q+ EK++LRTQTLLCDML+RD+P GIVTQSP+IM
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 425 DLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAAT 484
DLVKCDGA L+Y+ K + LG+TP++ Q++DI WL YH DSTGLSTDSL DAGYP A
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 485 LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 544
LGD VCGMA IT +D LFWFRS TA EI+WGGAKH P +KDDG+RMHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 545 VKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSVAR 603
VK+RSLPW + EMDAIHSLQLILR++F+D E + ++A+L DL+++G+ EL +V
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLIETAT PI AVDV G VNGWN K++ELTGL V++A+GK L+ LV +IV
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLL-TLVEDSSVDIVKR 678
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L AL+G+E++N++ +++T G+++ + +VVNAC+S+D N+VGVCFVGQD+T QK
Sbjct: 679 MLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQK 738
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+VMDKF I+GDYKAIV + NPLIPPIF +DE CSEWN AM LTGW R +++ KML+
Sbjct: 739 MVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLL 798
Query: 784 GEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRV 840
GEVFG +CCRLK +A + L+ A GQ++EK F F R GKYV+ LL +K++
Sbjct: 799 GEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKL 858
Query: 841 NMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNS 900
+ EG + G FCFLQ+AS ELQQAL VQR E+ RLK LAY+ ++I NPLSG+ F+
Sbjct: 859 DREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKRQIWNPLSGIIFSGK 918
Query: 901 LLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVS 960
++E T+L +QK+LL TSA C+ Q+ KI+ D DL+SI +G L+ E EF L V+ A S
Sbjct: 919 MMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREVLVAATS 978
Query: 961 QVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVR 1020
QVMM E+ +++I D EE +YGD R+QQVLADFL V ++PS G + +
Sbjct: 979 QVMMKSNEKGIRIINDAAEETMAETLYGDSIRLQQVLADFLQMSVNFTPSG-GLLSVSAS 1037
Query: 1021 PTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNG 1080
T Q + +VH E R+ PG G+P L+ MF + EG+ L + RK++KLMNG
Sbjct: 1038 LTKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMFGEDTDASVEGISLVISRKLVKLMNG 1097
Query: 1081 EVQYIRESERCYFLIIFELPMPRRGSK 1107
+V+Y+RE+ + F+I EL + K
Sbjct: 1098 DVRYMREAGKSSFIISVELAGGHKSQK 1124
>gi|39980592|gb|AAR33016.1| phytochrome C [Sorghum bicolor]
gi|39980594|gb|AAR33017.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 1167 bits (3019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/1105 (53%), Positives = 774/1105 (70%), Gaps = 43/1105 (3%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRT-MSHSVPEQQISAYLSKIQRGGHIQPFG 100
+AQ VDA+LHA FE S ++FDYS SV + SV +S Y +QRG +IQPFG
Sbjct: 26 VAQTPVDAQLHAEFESSQ---RNFDYSSSVSAAIRPSVSTSTVSTYHQTMQRGLYIQPFG 82
Query: 101 CTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKA 160
C +AV TF ++AYSENA EML L P +VP +++++ L +G DVRTLF S SSV L KA
Sbjct: 83 CLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVALHKA 142
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S KLA
Sbjct: 143 ATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSYKLA 202
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
+AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV++E +R DLEPY
Sbjct: 203 AKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDLEPY 262
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLF +N+VRMI DC AT + +IQD+ L QPL L GSTLRA HGCH
Sbjct: 263 LGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASHGCH 322
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----RLWA------------------ 377
AQYMANMGS+ASL ++V I+ ++EE V S +LW
Sbjct: 323 AQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVPFPLRY 382
Query: 378 --------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
FG+QLN E++LA+Q E+H+LRTQTLL DMLLRD+P GI TQSP++MDLVKC
Sbjct: 383 ACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWDMLLRDAPVGIFTQSPNVMDLVKC 442
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYYQ + LG TP+E++IK I WL H STGLSTDSL +AGYP AA L + V
Sbjct: 443 DGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALREVV 502
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSR 548
CGMA I+ +DF+FWFRSHT KEIKWGGAKH P D DD G++MHPRSSFKAFLEVVK R
Sbjct: 503 CGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVVKWR 562
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELSSVAREM 605
S+PW++ EMDAIHSLQLILR S +D +A +N +++V A D ++QG+ EL +V EM
Sbjct: 563 SVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTVTNEM 622
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAP+ AVD+ G +NGWN K AELTGL V EA+G+ L+ DLV + E+V +L
Sbjct: 623 VRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLI-DLVVVDSIEVVKRIL 681
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
AL+G E++N+EIKL+ F + + ++VN+C S+D + ++GVCFVGQD+T QK++
Sbjct: 682 DSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQKMI 741
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDK+ IQGDY AIV +P+ LIPPIF ++ C EWN AM+K+TG R D+I K+L+GE
Sbjct: 742 MDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLLIGE 801
Query: 786 VF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
VF CR+K LTK I ++ GQD EK F FD +GKY+++LLT NKR+N
Sbjct: 802 VFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKRINA 861
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG+I GA CFL +ASPELQ AL VQ+ E+ KEL YI QE++NPL+G+ FT +LL
Sbjct: 862 EGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTCNLL 921
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E ++LTE+Q++LL ++ C+ Q+ KI+ D DLESIE +E EF L +N V+ Q
Sbjct: 922 EPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVLMQG 981
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
+ L +E+ + + RD P EI + +YGD R+QQVLAD+L ++++ AEG + + V P
Sbjct: 982 IPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQVIPK 1041
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+ G I H EFR+V P G+P L+Q+MF + +++EGLGL +C+K++K M+G V
Sbjct: 1042 KENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNPEVSREGLGLYICQKLVKTMSGTV 1101
Query: 1083 QYIRESERCYFLIIFELPMPRRGSK 1107
QY+RE++ F+I+ E P+ + SK
Sbjct: 1102 QYLREADTSSFIILIEFPVAQLSSK 1126
>gi|258677125|gb|ACV87353.1| phytochrome A [Aquilegia formosa]
Length = 1130
Score = 1167 bits (3018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/1126 (51%), Positives = 772/1126 (68%), Gaps = 52/1126 (4%)
Query: 14 SQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRT 73
S S TS+ R+ H+A + IAQ TVDA+LHA FE E+G SFDYS+SV
Sbjct: 2 SNSRPNQVATSSSRSKHSA-------RVIAQTTVDAKLHAEFE---ETGSSFDYSRSVSV 51
Query: 74 MSHSVPEQQ----ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS 129
+ S + + +AYL +IQ+G IQPFGC +A+DE T +VIAYSENA EML + +
Sbjct: 52 TNSSNQQTRSDKVTTAYLHQIQKGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHA 111
Query: 130 VPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHR 189
VP++ + +L IGTD++T+ TS S+ L+KA ++TLLNPI +H K++GKPFYAI+HR
Sbjct: 112 VPSVGEHPVLGIGTDLKTILTSPSASALQKALAFSDVTLLNPILVHCKSSGKPFYAIVHR 171
Query: 190 VDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQL 249
V ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G I LCDTVVE V QL
Sbjct: 172 VTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSIDRLCDTVVEEVFQL 231
Query: 250 TGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDC 309
TGYDRVMVY+FH+D+HGEVV+E+ + L PY GLHYPATDIPQA+RFLF +N++RMI DC
Sbjct: 232 TGYDRVMVYKFHDDDHGEVVSETTKEGLPPYLGLHYPATDIPQAARFLFMKNKIRMICDC 291
Query: 310 HATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE--AV 367
A + V+QDE L L L GSTLRAPH CH QYM NM SIASL +AV+IN DEE V
Sbjct: 292 RAKHVRVLQDEKLPFELTLCGSTLRAPHSCHLQYMENMDSIASLVMAVVINDGDEEEGTV 351
Query: 368 GGRSTT----RLWA--------------------------FGLQLNMELQLASQLSEKHV 397
G S + RLW F + +N E +L +Q+ EK++
Sbjct: 352 EGASQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLIQVFAIHVNKEFELENQILEKNI 411
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDML+R++P GIV+QSP+IMDLVKCDGAAL YQ K + LG++P+E+ I+DI
Sbjct: 412 LRTQTLLCDMLMRNAPIGIVSQSPNIMDLVKCDGAALLYQNKIWRLGLSPSESHIRDIAS 471
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WL YH DSTGLSTDSL DAG+P A ++GD VCGMA I +D LFWFRSHTA EI+WG
Sbjct: 472 WLSEYHMDSTGLSTDSLYDAGFPGALSIGDTVCGMAAVRINSKDMLFWFRSHTAGEIRWG 531
Query: 518 GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS 577
GAKH P +KDDG++MHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E +
Sbjct: 532 GAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSFPWKDFEMDAIHSLQLILRNTFKDIETA 591
Query: 578 NSKA-VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELT 636
+ V+++QL L++ G++EL +V EMVRLIETAT PI AVD++G +NGWN K+AELT
Sbjct: 592 DGNTNVIHSQLDKLKIDGMEELEAVTNEMVRLIETATVPILAVDINGLINGWNTKIAELT 651
Query: 637 GLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
GL V++ +GK + LV + E V +LH AL G+E++NV +++T G++ V +V
Sbjct: 652 GLPVDQVIGKHFL-KLVEESSAETVKRMLHLALLGKEEQNVHFEMKTHGSKKDSGPVSLV 710
Query: 697 VNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDEN 756
VNAC+S+D N+VGVCFV D+T+QK+VMDKF I+GDYKAI+ +P+PL PPIF +DE
Sbjct: 711 VNACASRDLQENVVGVCFVAHDLTNQKMVMDKFTRIEGDYKAILQNPSPLYPPIFGTDEF 770
Query: 757 TCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQ 813
C EWN AM KL+GW R +++ KML+GE+FG SCCRLK + I L+ A G+
Sbjct: 771 GWCCEWNPAMTKLSGWDRAEVMDKMLLGEIFGTNMSCCRLKNQETFVNLGIVLNGAMMGE 830
Query: 814 DTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKK 873
+T+K F F RNG YV LL+ K+V+ EG + G FCFL S ELQQAL VQR E+
Sbjct: 831 ETDKVSFGFFGRNGNYVDCLLSVTKKVDGEGVVTGVFCFLHTVSQELQQALHVQRLSEQS 890
Query: 874 CFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVD 933
+ K L Y+ ++I+NPLSG+ F+ ++ TDL E+QKQLL TS C++Q+ K+++D D
Sbjct: 891 ALQKSKGLTYMKRQIRNPLSGIIFSGKMMGGTDLDEEQKQLLHTSMHCQRQLHKVLEDTD 950
Query: 934 LESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARI 993
LE I DG ++ + EF L V+ +SQV + R+L+ D E+ T +YGD R+
Sbjct: 951 LERIMDGYVDSKMIEFTLREVLITCISQVKIESDRRSLRFTNDSLEDFMTETLYGDSLRL 1010
Query: 994 QQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQD 1053
QQVLADF+L V+++P G + I T + E + H E R+ G G+P EL+
Sbjct: 1011 QQVLADFMLVSVKFTPKG-GQIGISASLTRNRLGESVHLAHLELRLTHSGGGIPEELLSH 1069
Query: 1054 MFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
MF S ++EG+ L +CRK+LK+MNG+VQY+RE+ + F+I EL
Sbjct: 1070 MFESDSEASEEGVSLLVCRKLLKVMNGDVQYLREAGKSSFIIPVEL 1115
>gi|183239022|gb|ACC60969.1| phytochrome A [Vitis riparia]
Length = 1124
Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/1105 (52%), Positives = 777/1105 (70%), Gaps = 43/1105 (3%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVP--EQQISAYLSKIQRGGHI 96
++ IAQ TVDA+LHA FE+SG S + P ++ +AYL IQ+G I
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGKLI 79
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFG +A+D+ TF+VIAYSENA EML + +VP++ + +L IGTDVRT+F+ S+
Sbjct: 80 QPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSASA 139
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQS 216
L KA G E++LLNPI +H K +GKPFYAI+HRV ++ID EP + + ++ AGA+QS
Sbjct: 140 LHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQS 199
Query: 217 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPD 276
KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FH+D+HGEVV+E +P
Sbjct: 200 YKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPG 259
Query: 277 LEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAP 336
LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + V+QDE L L L GSTLRAP
Sbjct: 260 LEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAP 319
Query: 337 HGCHAQYMANMGSIASLALAVIINGNDEEAVGGRS-----TTRLWA-------------- 377
H CH QYM NM SIASL +AV++N DEE S RLW
Sbjct: 320 HSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPF 379
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
F + +N EL+L SQ+ EK++LRTQTLLCDML+RD+P GIV+QSP++MD
Sbjct: 380 PLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMD 439
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAAL Y+ K + LG+TP++ Q+ DI WL YH DSTGLSTDSL DAGYP A L
Sbjct: 440 LVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALAL 499
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA IT +D LFWFRSHTA E++WGGAKH P +KDDG++MHPRSSFKAFLEVV
Sbjct: 500 GDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVV 559
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSVARE 604
K+RSLPW + EMDAIHSLQLILR++F+D+EA + + ++ +L DL+++G+ EL +V E
Sbjct: 560 KTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTSE 619
Query: 605 MVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNL 664
MVRLIETA+ PI AVDV G VNGWN K++ELT L V++A+G L+ LV + V +
Sbjct: 620 MVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLL-TLVEDSSADTVKKM 678
Query: 665 LHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKL 724
LH AL+G+E++NV+ +++T G++ + +VVNAC+S+D N+VGVCFV QD+T QK
Sbjct: 679 LHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLDENVVGVCFVAQDITSQKT 738
Query: 725 VMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVG 784
VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN AM KL+GW+R +++ KML+G
Sbjct: 739 VMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLG 798
Query: 785 EVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVN 841
EVFG+ CCRLK +A I L++ G+++EK F F ++GKYV+ LL+ +K+++
Sbjct: 799 EVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKLD 858
Query: 842 MEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSL 901
EG + G FCFLQ+AS ELQQAL +QR E+ RLK LAYI ++IKNPLSG+ F+ +
Sbjct: 859 REGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRKM 918
Query: 902 LEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQ 961
+E TDL E+Q+Q+L TSA C++Q+ KI+ D DL+SI +G L+ E EF L V+ A +SQ
Sbjct: 919 MEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLVASISQ 978
Query: 962 VMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRP 1021
VM+ + +Q++ D E I T +YGD R+QQVLADFLL V ++P G ++ V
Sbjct: 979 VMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTP---GGGQLSVAA 1035
Query: 1022 TLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMN 1079
+L + G+++ VH E R+ G G+P +L+ MF ++ ++EG+ L + RK++KLMN
Sbjct: 1036 SLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLLISRKLVKLMN 1095
Query: 1080 GEVQYIRESERCYFLIIFELPMPRR 1104
G+VQY+RE+ + F+I EL R+
Sbjct: 1096 GDVQYLREAGKSTFIISIELAAARK 1120
>gi|11134032|sp|P93528.1|PHYC_SORBI RecName: Full=Phytochrome C
gi|1800219|gb|AAB41399.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 1165 bits (3015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/1105 (53%), Positives = 773/1105 (69%), Gaps = 43/1105 (3%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRT-MSHSVPEQQISAYLSKIQRGGHIQPFG 100
+AQ VDA+LHA FE S ++FDYS SV + SV +S Y +QRG +IQPFG
Sbjct: 26 VAQTPVDAQLHAEFESSQ---RNFDYSSSVSAAIRPSVSTSTVSTYHQTMQRGLYIQPFG 82
Query: 101 CTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKA 160
C +AV TF ++AYSENA EML L P +VP +++++ L +G DVRTLF S SSV L KA
Sbjct: 83 CLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVALHKA 142
Query: 161 FGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLA 220
E+ LLNPI +H++ +GKPFYAILHR+DVG+VIDLEP D ++ AGA++S KLA
Sbjct: 143 ATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSYKLA 202
Query: 221 VRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPY 280
+AIS+LQSLP G++ LLCD +V V +LTGYDRVM Y+FHEDEHGEV++E +R DLEPY
Sbjct: 203 AKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDLEPY 262
Query: 281 FGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCH 340
GLHYPATDIPQASRFLF +N+VRMI DC AT + +IQD+ L QPL L GSTLRA HGCH
Sbjct: 263 LGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASHGCH 322
Query: 341 AQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----RLWA------------------ 377
AQYMANMGS+ASL ++V I+ ++EE V S +LW
Sbjct: 323 AQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVPFPLRY 382
Query: 378 --------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
FG+QLN E++LA+Q E+H+LRTQTLL DMLLRD+P GI TQSP++MDLVKC
Sbjct: 383 ACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWDMLLRDAPVGIFTQSPNVMDLVKC 442
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DG ALYYQ + LG TP+E++IK I WL H STGLSTDSL +AGYP AA L + V
Sbjct: 443 DGVALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALREVV 502
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSR 548
CGMA I+ +DF+FWFRSHT KEIKWGGAKH P D DD G++MHPRSSFKAFLEVVK R
Sbjct: 503 CGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVVKWR 562
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEA--SNSKAVVNAQLVDL-ELQGVDELSSVAREM 605
S+PW++ EMDAIHSLQLILR S +D +A +N +++V A D ++QG+ EL +V EM
Sbjct: 563 SVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTVTNEM 622
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAP+ AVD+ G +NGWN K AELTGL V EA+G+ L+ DLV + E+V +L
Sbjct: 623 VRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLI-DLVVVDSIEVVKRIL 681
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
AL+G E++N+EIKL+ F + + ++VN+C S+D + ++GVCFVGQD+T QK++
Sbjct: 682 DSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQKMI 741
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDK+ IQGDY AIV +P+ LIPPIF ++ C EWN AM+K+TG R D+I K+L+GE
Sbjct: 742 MDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLLIGE 801
Query: 786 VF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
VF CR+K LTK I ++ GQD EK F FD +GKY+++LLT NKR+N
Sbjct: 802 VFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKRINA 861
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG+I GA CFL +ASPELQ AL VQ+ E+ KEL YI QE++NPL+G+ FT +LL
Sbjct: 862 EGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTCNLL 921
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E ++LTE+Q++LL ++ C+ Q+ KI+ D DLESIE +E EF L +N V+ Q
Sbjct: 922 EPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVLMQG 981
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
+ L +E+ + + RD P EI + +YGD R+QQVLAD+L ++++ AEG + + V P
Sbjct: 982 IPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQVIPK 1041
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+ G I H EFR+V P G+P L+Q+MF + +++EGLGL +C+K++K M+G V
Sbjct: 1042 KENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFRHNPEVSREGLGLYICQKLVKTMSGTV 1101
Query: 1083 QYIRESERCYFLIIFELPMPRRGSK 1107
QY+RE++ F+I+ E P+ + SK
Sbjct: 1102 QYLREADTSSFIILIEFPVAQLSSK 1126
>gi|449506938|ref|XP_004162889.1| PREDICTED: LOW QUALITY PROTEIN: phytochrome C-like [Cucumis sativus]
Length = 1119
Score = 1165 bits (3014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/1115 (52%), Positives = 764/1115 (68%), Gaps = 47/1115 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSV----RTMSH 76
S TS R+ H A +AQ +DA+LH FE S + FDYS SV +
Sbjct: 12 SKTSFDRSKHGA-------HVVAQTPIDAKLHVDFEGSE---RLFDYSASVDFNAACSTS 61
Query: 77 SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ 136
+V + +YL IQRG +QPFGC IAVD V+AYSENA EML LAP +VPN+E+Q
Sbjct: 62 NVHASTVQSYLLNIQRGSLVQPFGCMIAVDGENLSVLAYSENAPEMLDLAPHAVPNIEQQ 121
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
E LT GTDVRTLF S + L+KA +E+ LLNPI +H + +GKPFYAILHRVDVG++I
Sbjct: 122 EALTFGTDVRTLFRSPGAAALQKAADFKEVNLLNPILVHCRTSGKPFYAILHRVDVGLII 181
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
DLEP D ++ AGA++S KLA +AIS+LQ+L G+I LLC+ +V+ V LTGYDRVM
Sbjct: 182 DLEPVNPADVPVTAAGALKSYKLAAKAISKLQNLQSGNISLLCEVLVKEVSDLTGYDRVM 241
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
VY+FH+DEHGEVVAE R DLEPYFGLHYPATDIPQASRFLF +N+VRMI DC A P+ V
Sbjct: 242 VYKFHDDEHGEVVAECCRSDLEPYFGLHYPATDIPQASRFLFLKNKVRMICDCLAPPVKV 301
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-L 375
+QD L QPL L GS LRAPHGCHA+YM NMGSIASL +++ IN ND E+ + R L
Sbjct: 302 LQDRRLAQPLSLCGSALRAPHGCHARYMMNMGSIASLVMSITINENDSESENDQEKDRKL 361
Query: 376 WA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 409
W FG+Q+N E++L +QL EKH+LR QT+LCDMLL
Sbjct: 362 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELQAQLKEKHILRIQTVLCDMLL 421
Query: 410 RDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGL 469
RD+P GIVTQSP+IMDLVKCDGAALY++ K++ LGVTPTE QI++I +WLL H STGL
Sbjct: 422 RDAPVGIVTQSPNIMDLVKCDGAALYFRKKFWSLGVTPTEAQIRNIADWLLKDHSGSTGL 481
Query: 470 STDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 529
STDSL +AG+ A+ LGD +CGMA IT +DFLFWFRSH AKEI+WGGAKH P D+DDG
Sbjct: 482 STDSLTEAGFYGASALGDEICGMAAVRITSKDFLFWFRSHMAKEIRWGGAKHDPSDEDDG 541
Query: 530 QRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVD 589
++MHPRSSFKAFLEVVK RS PW++ EMDAIHSLQLILR S +D K + VD
Sbjct: 542 RKMHPRSSFKAFLEVVKRRSQPWEDVEMDAIHSLQLILRGSLQDEIEEECKVITTVPPVD 601
Query: 590 LELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLV 649
+ Q +DEL + EMVRLIETA PI AVDV G +NGWN+K ELTGL+++EA+G LV
Sbjct: 602 EKTQQLDELRVITNEMVRLIETAAVPILAVDVFGKINGWNSKATELTGLAIQEAIGMPLV 661
Query: 650 HDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNI 709
D V + ++V +L A++G E+KNVEIKL+TFG + V + VN+C S+D NN+
Sbjct: 662 -DCVVNDSVKVVKKMLSLAIQGIEEKNVEIKLKTFGTAVQNGPVILEVNSCCSRDLNNNV 720
Query: 710 VGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKL 769
VG+ F+GQDVT QKLVM+++ IQGDY I+ +P+ LIPP F +D C EWN AMEKL
Sbjct: 721 VGIXFIGQDVTKQKLVMNQYTQIQGDYTGIMRNPSALIPPXFMADGEGRCLEWNDAMEKL 780
Query: 770 TGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRN 826
+G+ R ++ +ML+GEVF CR+K LTK I LH GQDTEKF F DR
Sbjct: 781 SGFRRVEMTNRMLLGEVFTLENFGCRVKD-HTLTKLRIILHRVISGQDTEKFLFRFCDRE 839
Query: 827 GKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQ 886
G YV++LLTA+KR + EG + G F FL +ASPELQ AL +QR E+ L +LAY+ Q
Sbjct: 840 GNYVESLLTASKRTDTEGTVTGVFFFLHVASPELQYALEMQRISEQATAENLHKLAYLRQ 899
Query: 887 EIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEK 946
EI+ PL G++ +L+ ++DL+ +QKQL++ + +Q+ KI+ D D++SIE+ +E
Sbjct: 900 EIRKPLDGIALMQNLISSSDLSIEQKQLIKLNTLSREQLHKIVHDTDIQSIEECYMETNC 959
Query: 947 AEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVR 1006
+EF LG V++ V +Q M L +ER +++I + ++ +L +YGD R+QQVL++FL N +
Sbjct: 960 SEFNLGDVLDVVTNQTMTLSQEREVKIICESLADVSSLHLYGDNLRLQQVLSEFLTNTLL 1019
Query: 1007 YSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGL 1066
++ E V P ++ +G IVH E R+ P G+P L+Q+MF + ++EGL
Sbjct: 1020 FT-CKESSVIFKATPRKERIGKGIHIVHLELRITHPTPGIPAHLIQEMFDDNNDSSKEGL 1078
Query: 1067 GLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
GL + +K++K+MNG VQY+RE+E F+I+ E P+
Sbjct: 1079 GLYISQKLVKIMNGTVQYLREAETSSFIILIEFPL 1113
>gi|16421|emb|CAA35221.1| unnamed protein product [Arabidopsis thaliana]
Length = 1122
Score = 1165 bits (3013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/1123 (52%), Positives = 785/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H + + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
+ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E +TT
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D+E ++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTK 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
V+ ++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGLSV+
Sbjct: 599 VIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK + LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHFL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L+NA QD +K
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPDKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL +K+++ +G + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDRKGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+++L+TSA C+KQ+ KI+ D DLESI
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ A SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMAVNFTPSGG---QLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
>gi|38037242|gb|AAR08427.1| phytochrome A [Monotropastrum globosum]
Length = 1130
Score = 1165 bits (3013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/1133 (52%), Positives = 783/1133 (69%), Gaps = 62/1133 (5%)
Query: 14 SQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR- 72
S QSSG+S R+ H+A + IAQ TVDA+LHA FE ESG SFDYS SVR
Sbjct: 3 SSRPTQSSGSSG-RSKHSA-------RIIAQTTVDAKLHADFE---ESGGSFDYSTSVRF 51
Query: 73 --TMSHSV---PEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAP 127
T+ + ++ +AYL +IQRG IQPFGC +AVDE TF+VIAYSENA EML +
Sbjct: 52 TGTVGGDIQPRSDKVTTAYLHQIQRGKLIQPFGCLLAVDEKTFKVIAYSENAPEMLTMVS 111
Query: 128 QSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAIL 187
+VP++ +L IGTDVRT+FT+ S+ L+KA G E++LLNPI +H K +GKPFYAI+
Sbjct: 112 HAVPSVGDHPLLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIV 171
Query: 188 HRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR 247
HRV ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G++++LCD +V+ V
Sbjct: 172 HRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMRILCDAMVQEVF 231
Query: 248 QLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIV 307
+LTGYDRVMVY+FH+D+HGEV +E +P LEPY GLHYPATDIPQA+RFLF +N++RMI
Sbjct: 232 ELTGYDRVMVYKFHDDDHGEVFSELTKPGLEPYLGLHYPATDIPQAARFLFMKNKIRMIC 291
Query: 308 DCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAV 367
DCHA + VIQD+ L L L GSTLRAPH CH QYM NM SIASL ++V++N DEE
Sbjct: 292 DCHAKQVKVIQDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGD 351
Query: 368 GG---------RSTTRLWA--------------------------FGLQLNMELQLASQL 392
GG + RLW F + +N EL+L +Q+
Sbjct: 352 GGGSSVSSNQQQKIKRLWGLLVCHNTTPRFVPFPLRYACEFLAQVFTIHVNKELELENQI 411
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
EK++LRTQTLLCDML+RD+P GIV+QSP++MDLVKCDGA L Y+ K Y +G TPT+ Q+
Sbjct: 412 HEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKDKTYRMGTTPTDFQL 471
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
+DIV WL YH DSTGLSTDSL DAGYP A GD VCGMA IT D LFWF++ TA
Sbjct: 472 RDIVYWLSEYHTDSTGLSTDSLYDAGYPGALAFGDGVCGMAAVKITSNDMLFWFKAQTAA 531
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EI+WGGAKH ++DDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+
Sbjct: 532 EIQWGGAKHESGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK 591
Query: 573 DAEASNSKA-VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAK 631
D +A ++ V++ +L DL+++G++EL +V EMVRLIETAT PI AVDV G VNGWN K
Sbjct: 592 DTKAMDATTDVIHTRLHDLKIEGMEELEAVTSEMVRLIETATVPILAVDVDGLVNGWNLK 651
Query: 632 VAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKK 691
+AELTGL V++A+G+ L+ LV IV +L AL+G+E++N++ +L+T +
Sbjct: 652 IAELTGLPVDKAIGRDLL-SLVEDSSTGIVKKMLDLALQGKEEQNIQFELKTDESRRDSG 710
Query: 692 AVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIF 751
+ +VVNAC+S+D+ N+VGVCFV QD+T K VMDKF I+GDYKAIV +PNPLIPPI
Sbjct: 711 PISLVVNACASRDHHENVVGVCFVAQDITGHKTVMDKFTRIEGDYKAIVQNPNPLIPPIL 770
Query: 752 ASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHN 808
+DE CSEWN AMEK++GW+R D+I KML+GEVFG+ CCRLK +A I L+N
Sbjct: 771 GTDEFGWCSEWNLAMEKISGWNREDVINKMLLGEVFGTHVVCCRLKNQEAFVNLGIVLNN 830
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A G+++EK F F RNGKYV+ +L A+K+++ EG + G FC LQ+ASPELQQAL VQR
Sbjct: 831 AVTGRESEKISFGFFARNGKYVECILCASKKIDGEGAVTGVFCLLQLASPELQQALHVQR 890
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
E+ R KELAYI ++ + LSG+ ++ L+E TDL E QKQLL TSA C+ Q+ KI
Sbjct: 891 LTEQTALKRFKELAYIRRQTRASLSGIMYSWRLMEGTDLRERQKQLLHTSAQCQHQLTKI 950
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D DL+ I DG L+ E EF L V++A +SQV + + + + + EE +YG
Sbjct: 951 LDDTDLDCIIDGYLDLEMVEFTLYEVLSASISQVTLKSNGKGIHIANPLQEEKMPATLYG 1010
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGL 1046
D R+QQV+ADFL V ++P+ +I +L + GQ++ VH E R+ G G+
Sbjct: 1011 DNLRLQQVIADFLSISVNFTPNGG---QIVASASLTKDRLGQSVQLVHVEIRITHMGGGV 1067
Query: 1047 PPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
P L+ MF ++EG+ L + RK++KLMNG+VQY+RE+ + F+I EL
Sbjct: 1068 PEGLLNQMFGGDTDTSEEGISLLVSRKLVKLMNGDVQYLREAGKSTFIISVEL 1120
>gi|340007753|gb|AEK26583.1| phytochrome A [Populus tremula]
Length = 1109
Score = 1164 bits (3010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/1090 (52%), Positives = 765/1090 (70%), Gaps = 40/1090 (3%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVP---EQQISAYLSKIQRGGH 95
++ IAQ TVDA+LHA FE+SG S + ++ P ++ +AYL IQ+G
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +A+DE TFRV+AYSENA E+L + +VP++ + +L IGTD+RT+FT+ S+
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
L+KA G +++LLNPI +H K +GKPFYAI+HRV ++ID EP + + ++ AGA+Q
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR M Y+FH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDE-----EAVGGRSTTRLWA------------- 377
PH CH QYM NM SIASL +AV++N DE ++ + RLW
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 378 -------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIM 424
F + +N EL+L +Q+ EK++LRTQTLLCDML+RD+P GIVTQSP+IM
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 425 DLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAAT 484
DLVKCDGA L+Y+ K + LG+TP++ Q++DI WL YH DSTGLSTDSL DAGYP A
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 485 LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 544
LGD VCGMA IT +D LFWFRS TA EI+WGGAKH P +KDDG+RMHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 545 VKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSVAR 603
VK+RSLPW + EMDAIHSLQLILR++F+D E + ++A+L DL+++G+ EL +V
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLIETAT PI AVDV G VNGWN K++ELTGL V++A+GK L+ LV +IV
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLL-TLVEDSSVDIVKR 678
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L AL+G+E++N++ +++T G+++ + +VVNAC+S+D N+VGVCFVGQD+T QK
Sbjct: 679 MLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQK 738
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+VMDKF I+GDYKAIV + NPLIPPIF +DE CSEWN AM LTGW R +++ KML+
Sbjct: 739 MVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLL 798
Query: 784 GEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRV 840
GEVFG +CCRLK +A + L+ A GQ++EK F F R GKYV+ LL +K++
Sbjct: 799 GEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKL 858
Query: 841 NMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNS 900
+ EG + G FCFLQ+AS ELQQAL VQR E+ RLK LAY+ ++I NPLSG+ F+
Sbjct: 859 DREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGK 918
Query: 901 LLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVS 960
++E T+L +QK+LL TSA C+ Q+ KI+ D DL+SI +G L+ E EF L V+ A S
Sbjct: 919 MMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREVLVAATS 978
Query: 961 QVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVR 1020
QVMM E+ +++I D EE+ +YGD R+QQVLADFLL V ++PS G + +
Sbjct: 979 QVMMKSNEKGIRIINDAAEEMMAETLYGDSIRLQQVLADFLLMSVNFTPSG-GLLTVSAS 1037
Query: 1021 PTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNG 1080
+ Q + +VH E R+ PG G+P L+ M+ + EG+ L + RK++KLMNG
Sbjct: 1038 FSKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMYGEDTGASVEGISLVISRKLVKLMNG 1097
Query: 1081 EVQYIRESER 1090
+V+Y+RE+ +
Sbjct: 1098 DVRYMREAGK 1107
>gi|130188|sp|P15001.1|PHYA_PEA RecName: Full=Phytochrome A
gi|169132|gb|AAA33682.1| phytochrome [Pisum sativum]
gi|295830|emb|CAA32242.1| phytochrome apoprotein [Pisum sativum]
gi|51173514|gb|AAT97643.1| phytochrome A apoprotein [Pisum sativum]
gi|226757|prf||1604466A phytochrome
Length = 1124
Score = 1163 bits (3009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1124 (51%), Positives = 779/1124 (69%), Gaps = 54/1124 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSF---------DYSQSV 71
S T ++ +N+ S ++ IAQ TVDA+LHA FE+SG S D Q
Sbjct: 2 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGDQQP 61
Query: 72 RTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVP 131
R+ + +AYL+ IQRG IQPFGC +A+DE T +V+AYSENA EML + +VP
Sbjct: 62 RS------NKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVP 115
Query: 132 NLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVD 191
++ L IGTD+RT+FT+ S+ L+KA G E++LLNPI +H K +GKPFYAI+HRV
Sbjct: 116 SVGDHPALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVT 175
Query: 192 VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTG 251
++ID EP + + ++ AGA+QS KLA +AI++LQSL G ++ LCDT+V+ V +LTG
Sbjct: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTG 235
Query: 252 YDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHA 311
YDRVM Y+FHED+HGEV+AE +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 236 YDRVMAYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNA 295
Query: 312 TPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-----EA 366
+ V+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N +DE +A
Sbjct: 296 KHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADA 355
Query: 367 VGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRT 400
V + RLW F + +N E++L Q+ EK++LRT
Sbjct: 356 VLPQKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRT 415
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDML+RD+P GIV+QSP+IMDLVKCDGAAL+Y+ K + LG TPTE+Q+++I W+
Sbjct: 416 QTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTESQLREIALWMS 475
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
YH DSTGLSTDSL+DAG+P A +L D VCGMA IT +D +FWFRSHTA EI+WGGAK
Sbjct: 476 EYHTDSTGLSTDSLSDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAK 535
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS--N 578
H P D+DDG++MHPRSSFKAFLEVVK+RS+PW + EMDAIHSLQLILR++ +D + N
Sbjct: 536 HEPGDQDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLN 595
Query: 579 SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGL 638
+KA +N +L DL+++G+ EL +V EMVRLIETAT PI AVDV G VNGWN K+AELTGL
Sbjct: 596 TKA-INTRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGL 654
Query: 639 SVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
V EA+GK L+ LV +IV +L+ AL+GEE+KNV+ +++T G + + ++VN
Sbjct: 655 PVGEAIGKHLL-TLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVESGPISLIVN 713
Query: 699 ACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTC 758
AC+SKD N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PN LIPPIF +DE
Sbjct: 714 ACASKDLRENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGW 773
Query: 759 CSEWNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDT 815
C EWN AM KLTGW R +++ KML+GEVFG SCCRLK +A F I L+ A G +T
Sbjct: 774 CCEWNAAMIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLET 833
Query: 816 EKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCF 875
EK PF F R GKYV+ LL+ +K+++ EG + G FCFLQ+ASPELQQAL +QR E+
Sbjct: 834 EKVPFGFFSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTAL 893
Query: 876 ARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLE 935
RLK L Y+ ++I+NPL+G+ F++ +LE TDL +QK+++ TS+ C++Q+ KI+ D DL+
Sbjct: 894 KRLKVLTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDSDLD 953
Query: 936 SIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQ 995
I DG L+ E AEF L V+ +SQVM + +++ D+ E I +YGD R+QQ
Sbjct: 954 GIIDGYLDLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIARETLYGDSLRLQQ 1013
Query: 996 VLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF 1055
VLADFLL + +P+ G V I T +Q + +V+ E + G G+P + MF
Sbjct: 1014 VLADFLLISINSTPNG-GQVVIAASLTKEQLGKSVHLVNLELSITHGGSGVPEAALNQMF 1072
Query: 1056 HSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
++ ++EG+ L + RK+LKLMNG+V+Y++E+ + F++ EL
Sbjct: 1073 GNNVLESEEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVEL 1116
>gi|9049364|dbj|BAA99408.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1123 (51%), Positives = 786/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P +EPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLYEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA +LGDAVCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HTDSTGLSTDSLYDAGFPKALSLGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 599 FIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG+ CCRLK +A I L++A Q++EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQTACCRLKNQEAFVNLGIVLNSAVTSQESEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKY++ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+Q+L+TS+ C+KQ+ K++ D DLE I
Sbjct: 898 KTLAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILQTSSLCQKQLSKVLDDSDLERII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ A SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPELLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ + +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEKDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIISAEL 1117
>gi|449458035|ref|XP_004146753.1| PREDICTED: phytochrome A-like [Cucumis sativus]
Length = 1123
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/1108 (53%), Positives = 772/1108 (69%), Gaps = 45/1108 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ------ISAYLSKIQR 92
++ IAQ +VDA+LHA FE ESG SFDYS SVR S + Q +AYL IQ+
Sbjct: 20 TRIIAQTSVDAKLHADFE---ESGNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQK 76
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSS 152
G IQPFGC +A+DE TF+VIAYSENA EML + +VP++ +L IGTDVRT+FT+
Sbjct: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAP 136
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+ L KA G E+TLLNPI +H K +GKPFYAI+HRV ++ID EP + + ++ AG
Sbjct: 137 SASALLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPVTAAG 196
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AI++LQSLP G + LCDT+V+ V +LTGYDRVM Y+FH+D+HGEV++E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEV 256
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC A L V+QDE L L L GST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGST 316
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG----GRSTTRLWA----------- 377
LRAPH CH QYMANM SIASL +AV++N DE+A G + RLW
Sbjct: 317 LRAPHSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKRKRLWGLVVCHNTSPRF 376
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
F + +N EL+L +Q+ EK++LRTQTLLCDML+RD+P GIV++SP+
Sbjct: 377 VPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPN 436
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVK DGAAL Y+ K + LG+TP++ ++DI WL YH DSTGLSTDSL DAGYP A
Sbjct: 437 IMDLVKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPGA 496
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
LGD VCGMA IT D +FWFRSHTA EI+WGGAKH +KDDG++MHPRSSFKAFL
Sbjct: 497 LALGDEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEKDDGRKMHPRSSFKAFL 556
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSV 601
EVVK+RSLPW + EMDAIHSLQLILR++F+D + ++ + L DL+++G EL SV
Sbjct: 557 EVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQMTLGDLKIEGRQELESV 616
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRLIETAT PI AVDV G +NGWN K+AELTGL V++A+GK L+ LV E+V
Sbjct: 617 TSEMVRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIGKHLL-TLVEDTSVEVV 675
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G+E++NV+ +++T G+ ++ +VVNAC+S+D N+VGVCFV QD+T
Sbjct: 676 KKMLYLALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNACASRDLRENVVGVCFVAQDITG 735
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
QK+VMDKF ++GDYKAIV +PNPLIPPIF SD+ CSEWN AM KLTGWSR ++I KM
Sbjct: 736 QKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCSEWNAAMTKLTGWSREEVIDKM 795
Query: 782 LVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVFG SCCRLK +A + L+NA GQD EK F F RNG YV+ LL NK
Sbjct: 796 LLGEVFGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEKVSFGFFGRNGMYVECLLCVNK 855
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
++ +G + G FCFLQ+AS ELQQAL +QR E+ RL+ L YI + I+NPLSG+ F+
Sbjct: 856 ILDKDGVVTGVFCFLQLASHELQQALNIQRLCEQTALKRLRALGYIKRHIQNPLSGIIFS 915
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
LLE T+L +Q+++L TS C+KQ+ K++++ DL+ I DG ++ E EF L V+
Sbjct: 916 RRLLERTELGTEQREILLTSLHCQKQISKVLEESDLDQIIDGFIDLEMVEFTLHEVLKVS 975
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
+SQVM+ + + +Q++ + EE + +YGD R+QQVLADFLL V Y+P A G ++I
Sbjct: 976 ISQVMIKSKGKAIQIVNETVEEAMSETLYGDSLRLQQVLADFLLLSVSYAP-AGGQLKIS 1034
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
T Q + +VH EFR+ G G+P L+ +MF S ++EG L + RK++KLM
Sbjct: 1035 TNLTKDQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGSEEEASEEGFSLLISRKLVKLM 1094
Query: 1079 NGEVQYIRESERCYFLIIFELPMPRRGS 1106
NG+V+Y+RE+ + F+I EL + S
Sbjct: 1095 NGDVRYMREAGKSSFIITVELAAAHKAS 1122
>gi|212722792|ref|NP_001131622.1| uncharacterized protein LOC100192976 [Zea mays]
gi|37926916|gb|AAP06791.1| phytochrome C2 apoprotein [Zea mays]
gi|413933056|gb|AFW67607.1| phytochromeC2 [Zea mays]
Length = 1135
Score = 1162 bits (3005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1130 (51%), Positives = 775/1130 (68%), Gaps = 56/1130 (4%)
Query: 14 SQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRT 73
S + S +S+ R+ H+A + +AQ VDA+LHA FE S + FDYS SV
Sbjct: 5 SNNRGTCSRSSSARSKHSA-------RVVAQTPVDAQLHADFEGSQ---RHFDYSSSVGA 54
Query: 74 MSH-SVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPN 132
+ S +S YL +QRG +IQPFGC +AV TF ++AYSENA EML L P +VP
Sbjct: 55 ANRPSASTSTVSTYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPT 114
Query: 133 LEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDV 192
+++++ LTIG DVRTLF S SSV L KA E+ LLNPI +H++ +GKPFYAILHR+DV
Sbjct: 115 IDQRDALTIGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDV 174
Query: 193 GIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGY 252
G+VIDLEP D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V +LTGY
Sbjct: 175 GLVIDLEPFNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGY 234
Query: 253 DRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 312
DRVM Y+FHEDEHGEV++E +R DLEPY GLHYPATDIPQASRFLF +N++RMI D AT
Sbjct: 235 DRVMAYKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKMRMICDFSAT 294
Query: 313 PLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GNDE 364
P+ +IQD L QP+ L GSTLRA HGCHAQYMANMGS+ASL ++V IN + +
Sbjct: 295 PVLIIQDGSLAQPVSLCGSTLRASHGCHAQYMANMGSVASLVMSVTINDDEEEDGDTDSD 354
Query: 365 EAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVL 398
+ GR +LW FG+QL+ E++LA+Q E+H+L
Sbjct: 355 QQPKGR---KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLSKEVELAAQAKERHIL 411
Query: 399 RTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEW 458
RTQTLLCDMLLRD+ GI TQSP++MDLVKCDGAALYYQ + LG TP+E++IK I W
Sbjct: 412 RTQTLLCDMLLRDALVGIFTQSPNVMDLVKCDGAALYYQNQVLVLGSTPSESEIKSIATW 471
Query: 459 LLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGG 518
L H STGLSTDSL +AGYP AA L + VCGM I+ ++F+FWFRSHT KEIKW G
Sbjct: 472 LQENHDGSTGLSTDSLVEAGYPGAAALREVVCGMVAIKISSKNFIFWFRSHTTKEIKWSG 531
Query: 519 AKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR--DAE 575
AKH P D DD G++MHPRSSFKAFLEVVK RS+PW++ EMDAIHSLQLILRDS + DA
Sbjct: 532 AKHEPFDADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRDSLQGEDAN 591
Query: 576 ASNSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+N +++V A D+ +LQG+ EL +V EMVRLIETATAP+ AVD+ G +NGWN K AE
Sbjct: 592 RNNIRSIVKAPSDDMKKLQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNKKAAE 651
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGL V EA+G+ L+ DLV + E+V +L AL+G E++N+EIKL+TF + V
Sbjct: 652 LTGLPVMEAIGRPLI-DLVVADSVEVVKQILDSALQGIEEQNLEIKLKTFHEQECCGPVI 710
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
+++N+C S+D + ++GVCFV QD+T QK++MDK+ IQGDY AI+ +P+ LIPPIF +
Sbjct: 711 LMINSCCSRDLSEKVIGVCFVAQDLTRQKMIMDKYTRIQGDYVAIIKNPSELIPPIFMIN 770
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAFG 811
+ C EWN AM+K+TG R D I K+L+GEVF CR+K LTK I ++
Sbjct: 771 DLGSCLEWNKAMQKITGMKREDAINKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVIS 830
Query: 812 GQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQE 871
GQD EK F F GKY+++LLT NKR N EG+I GA CFL +ASPELQ AL VQ+ E
Sbjct: 831 GQDPEKLLFGFFGTGGKYIESLLTVNKRTNAEGKITGALCFLHVASPELQHALEVQKMSE 890
Query: 872 KKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKD 931
+ KEL YI QE++NPL+G+ FT +LL+ ++LTEDQ+QL+ ++ C+ Q+ KI+ D
Sbjct: 891 QAATNSFKELTYIRQELRNPLNGMQFTYNLLKPSELTEDQRQLVSSNVLCQDQLKKILHD 950
Query: 932 VDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQA 991
DLESIE +E EF L +N V+ Q + L +E+ + + RD P E+ + +YGD
Sbjct: 951 TDLESIEQCYMETNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEVSHMYIYGDNI 1010
Query: 992 RIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELV 1051
R+QQVLAD+L ++++ AEG + + V P + G I H EFR+V P G+P L+
Sbjct: 1011 RLQQVLADYLACALQFTQPAEGHIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALI 1070
Query: 1052 QDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
Q+MF + +++EGLGL + +K++K M+G +QY+RE++ F+I+ E P+
Sbjct: 1071 QEMFQHNPGVSREGLGLYISQKLVKTMSGTLQYLREADTSSFIILIEFPV 1120
>gi|449505651|ref|XP_004162532.1| PREDICTED: LOW QUALITY PROTEIN: phytochrome A-like [Cucumis sativus]
Length = 1123
Score = 1160 bits (3002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/1108 (53%), Positives = 771/1108 (69%), Gaps = 45/1108 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ------ISAYLSKIQR 92
++ IAQ +VDA+LHA FE ESG SFDYS SVR S + Q +AYL IQ+
Sbjct: 20 TRIIAQTSVDAKLHADFE---ESGNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQK 76
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSS 152
G IQPFGC +A+D TF+VIAYSENA EML + +VP++ +L IGTDVRT+FT+
Sbjct: 77 GKLIQPFGCLLALDXKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAP 136
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+ L KA G E+TLLNPI +H K +GKPFYAI+HRV ++ID EP + + ++ AG
Sbjct: 137 SASALLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPVTAAG 196
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AI++LQSLP G + LCDT+V+ V +LTGYDRVM Y+FH+D+HGEV++E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEV 256
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC A L V+QDE L L L GST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGST 316
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG----GRSTTRLWA----------- 377
LRAPH CH QYMANM SIASL +AV++N DE+A G + RLW
Sbjct: 317 LRAPHSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKRKRLWGLVVCHNTSPRF 376
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
F + +N EL+L +Q+ EK++LRTQTLLCDML+RD+P GIV++SP+
Sbjct: 377 VPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPN 436
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVK DGAAL Y+ K + LG+TP++ ++DI WL YH DSTGLSTDSL DAGYP A
Sbjct: 437 IMDLVKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPGA 496
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
LGD VCGMA IT D +FWFRSHTA EI+WGGAKH +KDDG++MHPRSSFKAFL
Sbjct: 497 LALGDEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEKDDGRKMHPRSSFKAFL 556
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSV 601
EVVK+RSLPW + EMDAIHSLQLILR++F+D + ++ + L DL+++G EL SV
Sbjct: 557 EVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQMTLGDLKIEGRQELESV 616
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRLIETAT PI AVDV G +NGWN K+AELTGL V++A+GK L+ LV E+V
Sbjct: 617 TSEMVRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIGKHLL-TLVEDTSVEVV 675
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G+E++NV+ +++T G+ ++ +VVNAC+S+D N+VGVCFV QD+T
Sbjct: 676 KKMLYLALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNACASRDLRENVVGVCFVAQDITG 735
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
QK+VMDKF ++GDYKAIV +PNPLIPPIF SD+ CSEWN AM KLTGWSR ++I KM
Sbjct: 736 QKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCSEWNAAMTKLTGWSREEVIDKM 795
Query: 782 LVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVFG SCCRLK +A + L+NA GQD EK F F RNG YV+ LL NK
Sbjct: 796 LLGEVFGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEKVSFGFFGRNGMYVECLLCVNK 855
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
++ +G + G FCFLQ+AS ELQQAL +QR E+ RL+ L YI + I+NPLSG+ F+
Sbjct: 856 ILDKDGVVTGVFCFLQLASHELQQALNIQRLCEQTALKRLRALGYIKRHIQNPLSGIIFS 915
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
LLE T+L +Q+++L TS C+KQ+ K++++ DL+ I DG ++ E EF L V+
Sbjct: 916 RRLLERTELGTEQREILLTSLHCQKQISKVLEESDLDQIIDGFIDLEMVEFTLHEVLKVS 975
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
+SQVM+ + + +Q++ + EE + +YGD R+QQVLADFLL V Y+P A G ++I
Sbjct: 976 ISQVMIKSKGKAIQIVNETVEEAMSETLYGDSLRLQQVLADFLLLSVSYAP-AGGQLKIS 1034
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
T Q + +VH EFR+ G G+P L+ +MF S ++EG L + RK++KLM
Sbjct: 1035 TNLTKDQLGKSVHLVHLEFRITYAGGGIPESLLNEMFGSEEEASEEGFSLLISRKLVKLM 1094
Query: 1079 NGEVQYIRESERCYFLIIFELPMPRRGS 1106
NG+V+Y+RE+ + F+I EL + S
Sbjct: 1095 NGDVRYMREAGKSSFIITVELAAAHKAS 1122
>gi|240119389|dbj|BAH79243.1| phytochrome A [Cardamine resedifolia]
Length = 1122
Score = 1159 bits (2999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/1123 (51%), Positives = 785/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGY+R
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYER 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P +EPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISSKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVRRMLENALEGNEEQNVQFEIKTHLSMADTGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L++A Q++EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+Q+L TSA C+KQ+ K++ D DLESI
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQKQLSKVLDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ A SQVMM +++++ + EE+ + +YGD +QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSITLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R++ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKDQLGRSVHLAYLEIRLMHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
>gi|240119375|dbj|BAH79236.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1159 bits (2999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1123 (51%), Positives = 785/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P +EPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QD+ L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L++A Q++EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL +K+++ EG++ G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGEVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+Q+L TSA C++Q+ K++ D DLESI
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
>gi|240119377|dbj|BAH79237.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1159 bits (2998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1123 (51%), Positives = 785/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + +++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVSMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P +EPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QD+ L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L++A Q++EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+Q+L TSA C++Q+ K++ D DLESI
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
>gi|240119373|dbj|BAH79235.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1159 bits (2997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/1123 (51%), Positives = 785/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P +EPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QD+ L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDM++RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMMMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L++A Q++EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL +K+++ EG++ G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGEVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+Q+L TSA C++Q+ K++ D DLESI
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
>gi|240119381|dbj|BAH79239.1| phytochrome A [Cardamine nipponica]
gi|240119383|dbj|BAH79240.1| phytochrome A [Cardamine nipponica]
gi|240119387|dbj|BAH79242.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1123 (51%), Positives = 785/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE +SG SFDYS SVR V
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFE---DSGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P +EPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QD+ L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L++A Q++EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+Q+L TSA C++Q+ K++ D DLESI
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ A SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
>gi|401782502|dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
Length = 1124
Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/1102 (53%), Positives = 769/1102 (69%), Gaps = 46/1102 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ------ISAYLSKIQR 92
++ IAQ TVDA+LHA FE ESG SFDYS SVR S +QQ +AYL IQ+
Sbjct: 20 ARVIAQTTVDAKLHANFE---ESGSSFDYSNSVRVSSEVTGDQQPRSDKVTTAYLHHIQK 76
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSS 152
G IQPFGC +A+D+ TFRVIAYSENA EML + +VP++ +L IGTDVRT+FT
Sbjct: 77 GKLIQPFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTGP 136
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S+ L KA G E++LLNPI +H K++GKPFYAI+HRV +VID EP + + ++ AG
Sbjct: 137 SASALHKALGFGEVSLLNPILVHCKSSGKPFYAIVHRVTGSLVIDFEPVKPYEVPMTAAG 196
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FH+D+HGEVVAE
Sbjct: 197 ALQSYKLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVAEL 256
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+ LEPY GLHYP+TDIPQASRFLF +N+VRMIVDC A + V+QDE L L L GST
Sbjct: 257 TKTGLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKVLQDEKLPLDLTLCGST 316
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST-----TRLWA---------- 377
LRAPH CH QYM NM SIASL +AV+IN D E G S RLW
Sbjct: 317 LRAPHSCHLQYMENMNSIASLVMAVVINEGDYEVAGPDSAQTQKRKRLWGLVVCHNTTPR 376
Query: 378 ----------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSP 421
F + +N EL+L Q+ EK++LRTQTLLCDMLLRD+P GIV+Q+P
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELEDQMIEKNILRTQTLLCDMLLRDAPLGIVSQTP 436
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y+ K + LG+TP++ QI+DI WL H DSTGLSTDSL DAG+P
Sbjct: 437 NIMDLVKCDGAALLYKNKIWRLGLTPSDFQIQDISLWLSECHMDSTGLSTDSLYDAGFPG 496
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
A LGD CGMA IT +D +FWFRSHTA EI+WGGAKH P++KD+G +MHPRSSFKAF
Sbjct: 497 ALALGDVACGMAAVKITSKDIIFWFRSHTAAEIRWGGAKHDPDEKDNGWKMHPRSSFKAF 556
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRD-AEASNSKAVVNAQLVDLELQGVDELSS 600
LEV K+RSLPW + EMDAIHSLQLILR++F+D + + + + QL DL++ GV EL +
Sbjct: 557 LEVAKTRSLPWKDYEMDAIHSLQLILRNAFKDVGDMAVNNNGIQMQLSDLKIDGVQELEA 616
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
V EMVRLIETA+ PI AVD+ G VNGWN K++ELTGL V++A+GK+L+ LV + +
Sbjct: 617 VTGEMVRLIETASVPILAVDIEGSVNGWNTKISELTGLPVDKAIGKNLL-TLVEESSTSM 675
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVT 720
V +L AL+G+E++N++ +++T GA + +VVNAC+S+D N+VGVCFV QD+T
Sbjct: 676 VGRMLELALQGKEEQNIQFEIKTHGARADFGPISLVVNACASRDIHENVVGVCFVAQDIT 735
Query: 721 DQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGK 780
QK+VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN AM KLTGW R +++ K
Sbjct: 736 GQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMTKLTGWKREEVMDK 795
Query: 781 MLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
ML+GEVFG +CC LK +A + ++ A G+ +EK PF ++R GKY + LL +
Sbjct: 796 MLLGEVFGIHMACCPLKNQEAFVNLGVVINRAMTGEVSEKVPFGFWNRGGKYTECLLCVS 855
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
K+++ EG + G FCFLQ+ASPELQQAL VQR E+ R K LAYI ++I+NPLSG+ F
Sbjct: 856 KKLDSEGAVTGVFCFLQLASPELQQALHVQRLSEQTAVKRFKALAYIKRQIRNPLSGILF 915
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
+ ++E T+L +QKQL+ TSA C++Q+ KI+ D DL+SI DG L+ E EF L V+ A
Sbjct: 916 SRKMIEGTELGAEQKQLIHTSAQCQQQLSKILDDSDLDSIIDGYLDLEMVEFTLQEVLVA 975
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
+SQVM+ ++++ ++D EEI T +YGD R+QQVLADF+ V Y P G + +
Sbjct: 976 SISQVMIKSNAKSIRTVQDANEEIMTETLYGDSLRLQQVLADFISVSVNYMPPG-GQLTL 1034
Query: 1018 HVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKL 1077
T Q + + H EFR+ G G+P EL+ MF + +++EG+ L + RK++KL
Sbjct: 1035 ATNLTKDQLGQSVHLAHLEFRISHAGGGVPEELLNQMFGTDGDISEEGISLLISRKLVKL 1094
Query: 1078 MNGEVQYIRESERCYFLIIFEL 1099
MNG+VQY+RE+ + F+I EL
Sbjct: 1095 MNGDVQYLREAGKSTFIISAEL 1116
>gi|240119385|dbj|BAH79241.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1123 (51%), Positives = 785/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE +SG SFDYS SVR V
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFE---DSGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P +EPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QD+ L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIATWLCEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L++A Q++EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+Q+L TSA C++Q+ K++ D DLESI
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ A SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
>gi|240119379|dbj|BAH79238.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1123 (51%), Positives = 784/1123 (69%), Gaps = 51/1123 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
SG+ ++ + S ++ IAQ TVDA+LHA FE ESG SFDYS SVR V
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFE---ESGSSFDYSTSVRVTGPVVEN 58
Query: 81 QQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE 134
Q + YL IQ+G IQPFGC +A+DE TF+VIAYSENA E+L +A +VP++
Sbjct: 59 QPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVG 118
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H K + KPFYAI+HRV I
Sbjct: 119 EHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSI 178
Query: 195 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDR 254
++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 255 VMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPL 314
VM Y+FHED+HGEVV+E +P +EPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 315 CVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT- 373
V+QD+ L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 374 -----RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL Y
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+PKA LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG R ++I KML+GEVFG SCCRLK +A I L++A Q++EK
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
F F R GKYV+ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR E+ RL
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAYI ++I+NPLSG+ FT ++E T+L +Q+Q+L TSA C++Q+ K++ D DLESI
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
+G L+ E EF L V+ SQVMM +++++ + EE+ + +YGD R+QQVLA
Sbjct: 958 EGCLDLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFH 1056
DF+L V ++PS ++ V +L++ G+++ + E R+ G G+P L+ MF
Sbjct: 1018 DFMLMSVNFTPSGG---QLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFLLNQMFG 1074
Query: 1057 SSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 1075 TEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1117
>gi|83699543|gb|ABC40685.1| phytochrome B1 [Zea mays]
Length = 783
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/745 (75%), Positives = 635/745 (85%), Gaps = 38/745 (5%)
Query: 27 RAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAY 86
RA A + +VSKA+AQYT+DARLHAVFEQSG SG+SFDYSQS+R EQQI+AY
Sbjct: 39 RAGGGAAATESVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAY 98
Query: 87 LSKIQRGGHIQPFGCTIAV-DEATFRVIAYSENAGEMLGLAPQ-SVPNLEKQEI--LTIG 142
LS+IQRGGHIQPFGCT+AV D+++FR++A+SEN+ ++L L+P SVP+L+ +++G
Sbjct: 99 LSRIQRGGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPHVSLG 158
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
D R LF+ SS+VLLE+AF AREI+LLNPIWIHS+ + KPFYAILHR+DVG+VIDLEPAR
Sbjct: 159 ADARLLFSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDLEPAR 218
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
TEDPALSIAGAVQSQKLAVRAIS+LQ+LPGGD+KLLCDTVVE VR+LTGYDRVMVYRFHE
Sbjct: 219 TEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHE 278
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAES+R +LEPY GLHYPATDIPQASRFLF+QNRVRMI DCHATP+ VIQD GL
Sbjct: 279 DEHGEVVAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGL 338
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVII-NGNDEEAVGG---RSTTRLW-- 376
QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVII +G D+E G S +LW
Sbjct: 339 SQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGL 398
Query: 377 ------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 412
AFGLQLNMELQLA QLSEKH+LRTQTLLCDMLLRDS
Sbjct: 399 VVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDS 458
Query: 413 PAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTD 472
P GIVTQSPSIMDLVKCDGAALYY GKYYPLGVTPTE+QIKDI+EWL +HGDSTGLSTD
Sbjct: 459 PTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHGDSTGLSTD 518
Query: 473 SLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 532
SLADAGY AA LG+AVCGMAVAYIT D+LFWFRSHTAKEIKWGGAKHHPEDKDDGQRM
Sbjct: 519 SLADAGYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 578
Query: 533 HPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE--ASNSKAVVNA--QLV 588
HPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSFRDA +NSKA+VN QL
Sbjct: 579 HPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAIVNGQVQLR 638
Query: 589 DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSL 648
+LEL+G++ELSSVAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSL
Sbjct: 639 ELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSL 698
Query: 649 VHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNN 708
V+DL++KE E V+ LL AL+GEEDKNVEIKL+TFG+E K +FVVVNACSS+DYT N
Sbjct: 699 VNDLIFKESEATVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGPIFVVVNACSSRDYTQN 758
Query: 709 IVGVCFVGQDVTDQKLVMDKFIHIQ 733
IVGVCFVGQDVT QK+VMDKF++IQ
Sbjct: 759 IVGVCFVGQDVTGQKVVMDKFVNIQ 783
>gi|422898333|dbj|BAM67032.1| phytochrome a [Chrysanthemum seticuspe f. boreale]
Length = 1121
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/1124 (51%), Positives = 763/1124 (67%), Gaps = 50/1124 (4%)
Query: 14 SQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRT 73
+ S S T++ R+ H+A + I Q TVDA+L A FE ESG SFDYS SV
Sbjct: 2 ASSRPTESSTNSARSKHSA-------RIIQQTTVDAKLDADFE---ESGDSFDYSSSVHV 51
Query: 74 MSHSVPEQQ------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAP 127
+ + QQ +AYL IQ+G IQPFGC +A+DE TF+VIA+SENA EML +
Sbjct: 52 STTVIDGQQPRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAFSENAPEMLTMVS 111
Query: 128 QSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAIL 187
+VP + + +L IGTDVRT+F S+ L KA G E++LLNPI +H K +GKPFYAI+
Sbjct: 112 HTVPTVGENPVLGIGTDVRTIFAGPSATALFKALGFGEVSLLNPILVHCKTSGKPFYAII 171
Query: 188 HRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR 247
HRV ++ID EP + ++ AGA+QS K A +AI++LQSLP G I+ LCDT+V+ V
Sbjct: 172 HRVTGSLIIDFEPVMPNEVPMTAAGALQSYKHAAKAIARLQSLPSGSIERLCDTMVQEVF 231
Query: 248 QLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIV 307
+LTGYDRVM Y+FH+D+HGEVVAE +P L+PY GLHYPATDIPQA+RFLF +N+VRMI
Sbjct: 232 ELTGYDRVMAYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIC 291
Query: 308 DCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAV 367
DC A + V+QD+ L L L GS LRAPH CH QYM NM SIASL +AV+IN DEE
Sbjct: 292 DCRAKNVKVVQDKKLPFDLTLCGSNLRAPHSCHLQYMDNMTSIASLVMAVVINDMDEEGQ 351
Query: 368 GGRSTTR--LWA--------------------------FGLQLNMELQLASQLSEKHVLR 399
R LW F + +N EL+L +Q+ EK++LR
Sbjct: 352 TSEPQKRKKLWGLVVCHNTTPRFVPFPLRFACEFLAQVFAIHINKELELENQILEKNILR 411
Query: 400 TQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWL 459
TQTLLCD+L+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K Y +GV+PT++QI DIV WL
Sbjct: 412 TQTLLCDLLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKVYRMGVSPTDSQIHDIVSWL 471
Query: 460 LTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGA 519
YH DSTGLSTDSL DAGYP A LGD VCGMA +T++D LFWFRS+TA EI+WGGA
Sbjct: 472 YEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMASVRLTEKDILFWFRSNTASEIRWGGA 531
Query: 520 KHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNS 579
KH +KDDG+RMHPRSSFKAFLEVV+ RS PW + EMDAIHSLQLI+R++ +D E +
Sbjct: 532 KHEKGEKDDGKRMHPRSSFKAFLEVVRMRSFPWKDFEMDAIHSLQLIMRNALKDNEVAEL 591
Query: 580 KA-VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGL 638
K V+ A +L+L G+ EL +V EMVRLIETA+ PI AVD G VNGWN K+AELTGL
Sbjct: 592 KTDVIQAGFNELKLDGMQELEAVTSEMVRLIETASVPILAVDADGSVNGWNTKIAELTGL 651
Query: 639 SVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
+VEEA+G +L+ LV E V +L+ AL+G+E+ V+ +++T+G+ + +VVN
Sbjct: 652 TVEEAIGSNLL-TLVEDSSVETVQKMLNLALEGKEESGVQFEIKTYGSRRESGPITLVVN 710
Query: 699 ACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTC 758
AC+S+D N+VGVC + QD+T QK +MDKF I+GDYKAIVH+PNPLIPPIF +DE
Sbjct: 711 ACASRDVHENVVGVCCIAQDITHQKTIMDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGW 770
Query: 759 CSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDT 815
CSEWN AM +L+G SR +I KML+GEVFG+ CRL ++ I L+ A ++
Sbjct: 771 CSEWNQAMTELSGLSREQVIDKMLLGEVFGTHAASCRLSNEESFINLSIVLNKAMTSEEA 830
Query: 816 EKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCF 875
EK F F +NGKYV +L A+KRV+ EG + G FCFLQ+AS +LQQA+ QR E+
Sbjct: 831 EKISFGFFAKNGKYVDCMLCASKRVDSEGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAA 890
Query: 876 ARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLE 935
RLK LAY+ ++IKNPLSG+ F+ ++E T+L ++QK+LL TSA C+KQ+ K++ D DL+
Sbjct: 891 KRLKALAYVRRQIKNPLSGIIFSRKMMEGTELGDEQKELLHTSALCQKQLNKVLDDTDLD 950
Query: 936 SIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQ 995
SI DG L+ E EF L ++ A VSQVM +Q++ ++ E++ +YGD R+QQ
Sbjct: 951 SIVDGYLDLEMTEFTLQQILGASVSQVMTKSNIMGIQIVNNVAEDMLLEKLYGDSVRLQQ 1010
Query: 996 VLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF 1055
VLADFL V +P A G + I ++ +V+ E R+ G G+P EL++ MF
Sbjct: 1011 VLADFLSLSVSCTP-AGGVLAIAANLGKDLIAKSVQLVNLELRITHTGGGVPEELLRQMF 1069
Query: 1056 HSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
SS T+EG+ L + R +LKLM+G+VQY+RE+ + F+I EL
Sbjct: 1070 GSSMDATEEGISLVISRNLLKLMSGDVQYLREATKSTFIITVEL 1113
>gi|343408423|gb|AEM06737.1| phytochrome C [Arabidopsis thaliana]
gi|343408443|gb|AEM06747.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1110 (51%), Positives = 779/1110 (70%), Gaps = 49/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
TDQK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TDQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1080
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1081 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|297801114|ref|XP_002868441.1| hypothetical protein ARALYDRAFT_493637 [Arabidopsis lyrata subsp.
lyrata]
gi|297314277|gb|EFH44700.1| hypothetical protein ARALYDRAFT_493637 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 1145 bits (2961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1110 (50%), Positives = 779/1110 (70%), Gaps = 48/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR-----TMSHSVPEQQISAY 86
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S Y
Sbjct: 10 STRSRKNSRVSSQVLVDAKLHTNFE---ESERLFDYSASINLNMPSSSSCEIPSSAVSTY 66
Query: 87 LSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVR 146
L KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E L+IGTDV+
Sbjct: 67 LQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLTPHTVPSMEQREALSIGTDVK 126
Query: 147 TLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDP 206
+LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 SLFQSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEV 186
Query: 207 ALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHG 266
++ AGA++S KLA +IS+LQ+LPGG++ LLCD +V+ V +LTGYDRVMVY+FHED HG
Sbjct: 187 PVTAAGALRSYKLAAISISRLQALPGGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHG 246
Query: 267 EVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPL 326
EV+AE R DLEPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 EVIAECCREDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPI 306
Query: 327 CLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 SLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHA 366
Query: 378 -------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVT
Sbjct: 367 SPRFLPFPLRYACEFLTQVFGVQVNKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVT 426
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++G
Sbjct: 427 QSPNIMDLVKCDGAALYYREKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESG 486
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP A+ LG+++CGMA YIT +DFLFWFRS TAK+I+WGGA+H P D+ DG+RMHPRSSF
Sbjct: 487 YPDASVLGESICGMAAVYITDKDFLFWFRSGTAKQIQWGGARHDPNDR-DGKRMHPRSSF 545
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAF+E+V+ +S+PWD+ EMDAI+SLQLI++ S +D +SK VVN VD +Q VDEL
Sbjct: 546 KAFMEIVRWKSMPWDDMEMDAINSLQLIIKGSLQD---EHSKTVVNVPFVDNRVQKVDEL 602
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+ EMVRLI+TA PIFAVD G +NGWN+K AE++GL++E+A+GK V DLV +
Sbjct: 603 CVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVSGLAIEQAIGKP-VSDLVEDDSA 661
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
E V N+L AL+G E++ I++R FG + + + +VVN C S+D TNN++GVCF+GQD
Sbjct: 662 ETVKNMLALALEGSEERGAAIRIRAFGPKRKSSPIELVVNTCCSRDRTNNVLGVCFIGQD 721
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
VT QK +++ + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 VTGQKTLIENYSRVQGDYARIMWSPSTLIPPIFMTNENGLCSEWNNAMQKLSGIKREEVV 781
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+++GEVF S CRLK D LTK I + GQ + EK F + R+G +++ALL
Sbjct: 782 NKLILGEVFTSDDYGCRLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALL 841
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E+ +LAY+ QE+KNP
Sbjct: 842 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQVSEQVIACAFNKLAYLRQEVKNPEQA 901
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I+D D++ IE+G +E + +EF L
Sbjct: 902 ISFLQDLLHSSGLSEDQKKLLRTSVLCREQLAKVIRDSDIDGIEEGYVELDCSEFNLEES 961
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+I D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 962 LEAVVKQVMELSIERKVQIICDYPQEVLSMRLYGDNLRLQQILSETLLSSIRFTPALKGL 1021
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1022 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1081
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1082 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1111
>gi|261865351|gb|ACY01932.1| phytochrome A [Beta vulgaris]
Length = 1125
Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1126 (51%), Positives = 765/1126 (67%), Gaps = 47/1126 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
S ++ + +N+ S + +AQ VDA+LHA FE+S S SVR + S
Sbjct: 2 SSSTPSQGSNNSGRSKHSVRIMAQTIVDAKLHADFEESSSEFDY---SSSVRATTSSSAG 58
Query: 81 QQ-------ISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNL 133
+Q S+YL +IQ+G IQPFGC +A+DE TFRV+AYS+NA EML + +VP++
Sbjct: 59 KQPPKSDKVTSSYLLQIQKGKLIQPFGCLLALDEKTFRVVAYSDNAPEMLTMVSHAVPSV 118
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++ IGTDVRT+FT+ S+ L+KA G +++LLNPI +H K +GKPFYAI+HRV
Sbjct: 119 GDHPVIGIGTDVRTIFTAPSASALQKALGFADVSLLNPILVHCKTSGKPFYAIIHRVTGS 178
Query: 194 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYD 253
+VID EP + + ++ AGA+QS KLA +AI++LQSLP G+I L DT+V+ V +LTGYD
Sbjct: 179 LVIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNISRLVDTMVQEVYELTGYD 238
Query: 254 RVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 313
RVM Y+FH+D+HGEV++E +PDLEPY GLHYPATDIPQA+RFLF +N+VRMI DC A
Sbjct: 239 RVMAYKFHDDDHGEVISEITKPDLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKY 298
Query: 314 LCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG----- 368
+ VIQDE L L L GSTLRAPHGCHAQYM NM SI SL +AV++N DE+
Sbjct: 299 VQVIQDEKLPFDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDEDDNASAPPQ 358
Query: 369 GRSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
+ RLW F + +N EL+L +Q EK +LRTQT
Sbjct: 359 SQKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQT 418
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD P GIVTQSP+IMDLVKCDGA L Y + +GVTPT+ QI+DI WL
Sbjct: 419 LLCDMLMRDVPLGIVTQSPNIMDLVKCDGAVLLYNSNIWKIGVTPTDYQIRDIAVWLSLD 478
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAGYP A LGD VCGMA IT +D LFWFRSHTA E+KWGGAKH
Sbjct: 479 HQDSTGLSTDSLYDAGYPGALALGDTVCGMAAVRITLKDMLFWFRSHTAAEVKWGGAKHQ 538
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P +KDDG +MHPRSSFKAFLEVVK+RS+PW + EMDAIHSLQLILR++F+D EA++ + +
Sbjct: 539 PGEKDDGAKMHPRSSFKAFLEVVKNRSVPWKDFEMDAIHSLQLILRNAFKDKEAADLNTS 598
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
V+++++ DL++ G EL +V EMVRLIETAT PIFAVD G VNGWN K++ELTGL V
Sbjct: 599 VIHSKISDLKIDGYRELEAVTGEMVRLIETATVPIFAVDADGLVNGWNTKISELTGLPVT 658
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK + LV + V NLL AL+G+E+K+V+ +++ + + +VVNAC+
Sbjct: 659 EAVGKHIAA-LVEDCSIDTVRNLLQLALQGKEEKDVQFEIKRHQSMVDTGPISLVVNACA 717
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
SKD N++GVCF+ QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSE
Sbjct: 718 SKDVNGNVIGVCFIAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSE 777
Query: 762 WNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKF 818
WN AM KLTG+ R +++ KML+GEVFG SCCRLK +A + L+ A GQDTEK
Sbjct: 778 WNPAMSKLTGYKREEVMDKMLLGEVFGTHKSCCRLKNQEAFVNLGVVLNGAMSGQDTEKV 837
Query: 819 PFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARL 878
P F R GKY++ LL NK+++ EG + G FCFLQ+AS +LQ AL VQR E+ RL
Sbjct: 838 PIGFFTRTGKYIECLLCVNKKLDREGAVTGVFCFLQLASQDLQHALHVQRLAEQAASKRL 897
Query: 879 KELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIE 938
K LAY+ ++I+NPL G+ F+ LLE TDL E+Q+ LL TSA C++Q+ KI+ D DL+ I
Sbjct: 898 KALAYMKRQIRNPLCGIMFSRKLLEGTDLGEEQRLLLHTSAQCQRQLNKILDDSDLDCII 957
Query: 939 DGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLA 998
DG LE E EF + V+ A +SQVM E+ +++ + EE +YGD R+QQ+LA
Sbjct: 958 DGYLELEMVEFSMQDVLVASISQVMTKSNEKGIRIKSECGEECMRETLYGDSVRLQQILA 1017
Query: 999 DFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSS 1058
DFLL V +P A G V I VR + E + + EFR++ G G+ EL+ MF S+
Sbjct: 1018 DFLLISVNCTP-AGGDVGITVRLIKDKIGESVQLGNLEFRILHTGGGISEELLGQMFEST 1076
Query: 1059 RWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
T++G+ L + RK++KLMNG++QY+R + F+I EL + R
Sbjct: 1077 GDATEDGISLLISRKLVKLMNGDIQYLRSAGSSTFIISVELAVADR 1122
>gi|343408433|gb|AEM06742.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1110 (51%), Positives = 778/1110 (70%), Gaps = 49/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS SV + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASVNLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 LRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1080
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1081 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408417|gb|AEM06734.1| phytochrome C [Arabidopsis thaliana]
gi|343408419|gb|AEM06735.1| phytochrome C [Arabidopsis thaliana]
gi|343408425|gb|AEM06738.1| phytochrome C [Arabidopsis thaliana]
gi|343408429|gb|AEM06740.1| phytochrome C [Arabidopsis thaliana]
gi|343408431|gb|AEM06741.1| phytochrome C [Arabidopsis thaliana]
gi|343408435|gb|AEM06743.1| phytochrome C [Arabidopsis thaliana]
gi|343408437|gb|AEM06744.1| phytochrome C [Arabidopsis thaliana]
gi|343408445|gb|AEM06748.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1110 (51%), Positives = 778/1110 (70%), Gaps = 49/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS SV + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASVNLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1080
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1081 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408411|gb|AEM06731.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1144 bits (2958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1110 (50%), Positives = 778/1110 (70%), Gaps = 49/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1080
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1081 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|15239211|ref|NP_198433.1| phytochrome C [Arabidopsis thaliana]
gi|130192|sp|P14714.1|PHYC_ARATH RecName: Full=Phytochrome C
gi|16425|emb|CAA35223.1| unnamed protein product [Arabidopsis thaliana]
gi|10176703|dbj|BAB09925.1| phytochrome C [Arabidopsis thaliana]
gi|332006638|gb|AED94021.1| phytochrome C [Arabidopsis thaliana]
gi|343408415|gb|AEM06733.1| phytochrome C [Arabidopsis thaliana]
gi|343408427|gb|AEM06739.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1143 bits (2956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1110 (50%), Positives = 776/1110 (69%), Gaps = 49/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S LEKA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YI+++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + ++GDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + EK F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALRGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1080
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1081 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408413|gb|AEM06732.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1143 bits (2956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1110 (51%), Positives = 778/1110 (70%), Gaps = 49/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS SV + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASVNLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPIDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1080
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1081 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408439|gb|AEM06745.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1142 bits (2955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1110 (50%), Positives = 777/1110 (70%), Gaps = 49/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL + L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSFGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1080
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1081 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|37623877|gb|AAQ95581.1| phytochrome c [Arabidopsis thaliana]
Length = 1111
Score = 1142 bits (2954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1110 (50%), Positives = 777/1110 (70%), Gaps = 49/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1080
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1081 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|576939|emb|CAA83549.1| phyC [Arabidopsis thaliana]
gi|343408441|gb|AEM06746.1| phytochrome C [Arabidopsis thaliana]
gi|385654208|gb|AFI61904.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1142 bits (2953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1110 (50%), Positives = 777/1110 (70%), Gaps = 49/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LT YDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1080
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1081 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|343408421|gb|AEM06736.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1141 bits (2952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1110 (50%), Positives = 777/1110 (70%), Gaps = 49/1110 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LT YDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHGS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPKKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCR 1072
V V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQ 1080
Query: 1073 KILKLM-NGEVQYIRESERCYFLIIFELPM 1101
K++KLM G ++Y+RESE F+I+ E P+
Sbjct: 1081 KLVKLMERGTLRYLRESEMSAFVILTEFPL 1110
>gi|357441993|ref|XP_003591274.1| Phytochrome A [Medicago truncatula]
gi|355480322|gb|AES61525.1| Phytochrome A [Medicago truncatula]
Length = 1171
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/1123 (51%), Positives = 782/1123 (69%), Gaps = 42/1123 (3%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMS--HSV 78
S T ++ +N+ S ++ IAQ TVDA+LHA FE+SG S + ++ H
Sbjct: 49 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGEHQP 108
Query: 79 PEQQIS-AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE 137
+++ AYL+ IQRG IQPFGC +A+DE T +VIAYSENA EML + +VP++
Sbjct: 109 RSNKVTTAYLNTIQRGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHP 168
Query: 138 ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVID 197
L IGTD+RT+FT+ S+ L+KA G E++LLNPI +H K +GKPFYAI+HRV ++ID
Sbjct: 169 ALGIGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 228
Query: 198 LEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMV 257
EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 229 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 288
Query: 258 YRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVI 317
Y+FHED+HGEV+AE + LEPY GLHYPATDIPQA+RFLF +N+VRMIVDCHA + V+
Sbjct: 289 YKFHEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVL 348
Query: 318 QDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-----EAVGGRST 372
QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N +DE +AV +
Sbjct: 349 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 408
Query: 373 TRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCD 406
RLW F + +N E++L Q+ EK++LRTQTLLCD
Sbjct: 409 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEFQILEKNILRTQTLLCD 468
Query: 407 MLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDS 466
ML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E QI++I W+ YH DS
Sbjct: 469 MLMRDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGATPSEPQIREIALWMSEYHTDS 528
Query: 467 TGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDK 526
TGLSTDSL+DAG+P A L D VCGMA IT +D +FWFRSHTA EI+WGGAKH P ++
Sbjct: 529 TGLSTDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQ 588
Query: 527 DDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVN 584
DDG++MHPRSSFKAFLEVVK+RS+PW + EMDAIHSLQLILR++ +D + NSKA +N
Sbjct: 589 DDGRKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKA-IN 647
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
+L DL+++G+ EL +V EMVRLIETAT PI AVDV G VNGWN K++ELTGL V EA+
Sbjct: 648 TRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAI 707
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV +IV +L+ AL+G+E+KNV+ +++T G++ + ++VNAC+S+D
Sbjct: 708 GKHLL-TLVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDCGPISLIVNACASRD 766
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNT 764
N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PN LIPPIF +DE C EWN
Sbjct: 767 LHENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNA 826
Query: 765 AMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFP 821
AM K+TGW R +++ KML+GEVFG SCCRLK +A F I L+ A G +TEK PF
Sbjct: 827 AMIKITGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFG 886
Query: 822 LFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKEL 881
R GKYV+ LL+ +K+++ EG + G FCFLQ+ASPELQQAL +QR E+ RLK L
Sbjct: 887 FLSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVL 946
Query: 882 AYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS 941
Y+ ++I+NPLSG+ F++ +LE T+L +QK+++ TS+ C++Q+ KI+ D DL+SI DG
Sbjct: 947 TYMRRQIRNPLSGIVFSSKMLENTELGTEQKRIVNTSSQCQRQLSKILDDSDLDSIIDGY 1006
Query: 942 LEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFL 1001
L+ E AEF L V+ +SQVM R+++++ D+ E I +YGD R+QQVLADFL
Sbjct: 1007 LDLEMAEFTLHEVLVTSLSQVMNRSNTRSIRIVNDVAEHIAMETLYGDSLRLQQVLADFL 1066
Query: 1002 LNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWM 1061
L + +P+ G V I T +Q + +V+ E + G G+ ++ MF ++
Sbjct: 1067 LISINSTPNG-GQVVIAATLTKEQLGKSVHLVNLELSITHGGNGVAEAVLNQMFGNNGLE 1125
Query: 1062 TQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
++EG+ L + RK+LKLMNG+V+Y++E+ + F++ EL ++
Sbjct: 1126 SEEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAQK 1168
>gi|156753023|gb|ABU94257.1| phytochrome P [Pinus sylvestris]
gi|156753027|gb|ABU94259.1| phytochrome P [Pinus sylvestris]
gi|156753029|gb|ABU94260.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 1137 bits (2941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/736 (73%), Positives = 623/736 (84%), Gaps = 29/736 (3%)
Query: 130 VPNLEK--QEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAIL 187
VP++EK Q++LTIGTDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+
Sbjct: 1 VPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIV 60
Query: 188 HRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR 247
HR+DVG+VIDLEP RT D +S AGAVQSQKLAVRAIS+LQSLP GD+ LLCDTVVE+VR
Sbjct: 61 HRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVR 120
Query: 248 QLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIV 307
+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI
Sbjct: 121 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 180
Query: 308 DCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAV 367
DC ATP+ VIQ E LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGND+E
Sbjct: 181 DCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGG 240
Query: 368 G-GRSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVLRT 400
G GR++ +LW A GLQLNMELQLA+QL+EKH+LRT
Sbjct: 241 GSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRT 300
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL
Sbjct: 301 QTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPTEAQIKDIADWLL 360
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
+HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAK
Sbjct: 361 EHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAK 420
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHP+DKDD +RMHPRSSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K
Sbjct: 421 HHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTK 480
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
+V+++L DL LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V
Sbjct: 481 TMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPV 540
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
EAMG SLV DLV+++ E V+ +LH+AL+GEE+KNVE+ L+TFG + K+AV +VVNAC
Sbjct: 541 GEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNAC 600
Query: 701 SSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCS 760
SS+D+T+NIVGVCFVGQDVT QK+VMDKFI IQGDY++IV SPNPLIPPIFASDE CCS
Sbjct: 601 SSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCS 660
Query: 761 EWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPF 820
EWN AMEK+TGW+ ++IGKMLVGE+FG CCRLKG DA+TKF I LH+A GQ+ EKFPF
Sbjct: 661 EWNAAMEKVTGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSAIDGQEIEKFPF 720
Query: 821 PLFDRNGKYVQALLTA 836
FD+ GKYV+ALLTA
Sbjct: 721 AFFDKQGKYVEALLTA 736
>gi|156752995|gb|ABU94243.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/736 (73%), Positives = 622/736 (84%), Gaps = 29/736 (3%)
Query: 130 VPNLEK--QEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAIL 187
VP++EK Q++LTIGTDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+
Sbjct: 1 VPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIV 60
Query: 188 HRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR 247
HR+DVG+VIDLEP RT D +S AGAVQSQKLAVRAIS+LQSLP GD+ LLCDTVVE+VR
Sbjct: 61 HRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVR 120
Query: 248 QLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIV 307
+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI
Sbjct: 121 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 180
Query: 308 DCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAV 367
DC ATP+ VIQ E LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGND+E
Sbjct: 181 DCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGG 240
Query: 368 G-GRSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVLRT 400
G GR++ +LW A GLQLNMELQLA+QL+EKH+LRT
Sbjct: 241 GSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRT 300
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRD+P GIVTQSPSI DLVKCDGAALYY G + LGVTPTE QIKDI +WLL
Sbjct: 301 QTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLL 360
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
+HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAK
Sbjct: 361 EHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAK 420
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHP+DKDD +RMHPRSSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SFRD + S +K
Sbjct: 421 HHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSGTK 480
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
+V+++L DL LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V
Sbjct: 481 TMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPV 540
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
EAMG SLV DLV+++ E V+ +LH+AL+GEE+KNVE+ L+TFG + K+AV +VVNAC
Sbjct: 541 AEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNAC 600
Query: 701 SSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCS 760
SS+D+T+NIVGVCFVGQDVT QK+VMDKFI IQGDY++IV SPNPLIPPIFASDE CCS
Sbjct: 601 SSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCS 660
Query: 761 EWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPF 820
EWN AMEK+TGW+ ++IGKMLVGE+FG CCRLKG DA+TKF I LH+A GQ+ EKFPF
Sbjct: 661 EWNAAMEKVTGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSAIDGQEIEKFPF 720
Query: 821 PLFDRNGKYVQALLTA 836
FD+ GKYV+ALLTA
Sbjct: 721 AFFDKQGKYVEALLTA 736
>gi|156752953|gb|ABU94222.1| phytochrome P [Pinus sylvestris]
gi|156752955|gb|ABU94223.1| phytochrome P [Pinus sylvestris]
gi|156752957|gb|ABU94224.1| phytochrome P [Pinus sylvestris]
gi|156752959|gb|ABU94225.1| phytochrome P [Pinus sylvestris]
gi|156752961|gb|ABU94226.1| phytochrome P [Pinus sylvestris]
gi|156752963|gb|ABU94227.1| phytochrome P [Pinus sylvestris]
gi|156752965|gb|ABU94228.1| phytochrome P [Pinus sylvestris]
gi|156752967|gb|ABU94229.1| phytochrome P [Pinus sylvestris]
gi|156752969|gb|ABU94230.1| phytochrome P [Pinus sylvestris]
gi|156752971|gb|ABU94231.1| phytochrome P [Pinus sylvestris]
gi|156752973|gb|ABU94232.1| phytochrome P [Pinus sylvestris]
gi|156752975|gb|ABU94233.1| phytochrome P [Pinus sylvestris]
gi|156752977|gb|ABU94234.1| phytochrome P [Pinus sylvestris]
gi|156752979|gb|ABU94235.1| phytochrome P [Pinus sylvestris]
gi|156752981|gb|ABU94236.1| phytochrome P [Pinus sylvestris]
gi|156752983|gb|ABU94237.1| phytochrome P [Pinus sylvestris]
gi|156752985|gb|ABU94238.1| phytochrome P [Pinus sylvestris]
gi|156752987|gb|ABU94239.1| phytochrome P [Pinus sylvestris]
gi|156752989|gb|ABU94240.1| phytochrome P [Pinus sylvestris]
gi|156752991|gb|ABU94241.1| phytochrome P [Pinus sylvestris]
gi|156752993|gb|ABU94242.1| phytochrome P [Pinus sylvestris]
gi|156752997|gb|ABU94244.1| phytochrome P [Pinus sylvestris]
gi|156752999|gb|ABU94245.1| phytochrome P [Pinus sylvestris]
gi|156753001|gb|ABU94246.1| phytochrome P [Pinus sylvestris]
gi|156753003|gb|ABU94247.1| phytochrome P [Pinus sylvestris]
gi|156753005|gb|ABU94248.1| phytochrome P [Pinus sylvestris]
gi|156753007|gb|ABU94249.1| phytochrome P [Pinus sylvestris]
gi|156753009|gb|ABU94250.1| phytochrome P [Pinus sylvestris]
gi|156753011|gb|ABU94251.1| phytochrome P [Pinus sylvestris]
gi|156753013|gb|ABU94252.1| phytochrome P [Pinus sylvestris]
gi|156753015|gb|ABU94253.1| phytochrome P [Pinus sylvestris]
gi|156753017|gb|ABU94254.1| phytochrome P [Pinus sylvestris]
gi|156753019|gb|ABU94255.1| phytochrome P [Pinus sylvestris]
gi|156753021|gb|ABU94256.1| phytochrome P [Pinus sylvestris]
gi|156753025|gb|ABU94258.1| phytochrome P [Pinus sylvestris]
gi|156753031|gb|ABU94261.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 1136 bits (2938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/736 (73%), Positives = 622/736 (84%), Gaps = 29/736 (3%)
Query: 130 VPNLEK--QEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAIL 187
VP++EK Q++LTIGTDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+
Sbjct: 1 VPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIV 60
Query: 188 HRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR 247
HR+DVG+VIDLEP RT D +S AGAVQSQKLAVRAIS+LQSLP GD+ LLCDTVVE+VR
Sbjct: 61 HRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVR 120
Query: 248 QLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIV 307
+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI
Sbjct: 121 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 180
Query: 308 DCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAV 367
DC ATP+ VIQ E LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGND+E
Sbjct: 181 DCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGG 240
Query: 368 G-GRSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVLRT 400
G GR++ +LW A GLQLNMELQLA+QL+EKH+LRT
Sbjct: 241 GSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRT 300
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRD+P GIVTQSPSI DLVKCDGAALYY G + LGVTPTE QIKDI +WLL
Sbjct: 301 QTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLL 360
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
+HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAK
Sbjct: 361 EHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAK 420
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHP+DKDD +RMHPRSSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SFRD + S +K
Sbjct: 421 HHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSGTK 480
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
+V+++L DL LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V
Sbjct: 481 TMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPV 540
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
EAMG SLV DLV+++ E V+ +LH+AL+GEE+KNVE+ L+TFG + K+AV +VVNAC
Sbjct: 541 GEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNAC 600
Query: 701 SSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCS 760
SS+D+T+NIVGVCFVGQDVT QK+VMDKFI IQGDY++IV SPNPLIPPIFASDE CCS
Sbjct: 601 SSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCS 660
Query: 761 EWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPF 820
EWN AMEK+TGW+ ++IGKMLVGE+FG CCRLKG DA+TKF I LH+A GQ+ EKFPF
Sbjct: 661 EWNAAMEKVTGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSAIDGQEIEKFPF 720
Query: 821 PLFDRNGKYVQALLTA 836
FD+ GKYV+ALLTA
Sbjct: 721 AFFDKQGKYVEALLTA 736
>gi|309256333|gb|ADO60994.1| phytochrome b [Helianthus annuus]
Length = 683
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/674 (80%), Positives = 597/674 (88%), Gaps = 27/674 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
++SKAIAQY +DARLHAV+EQSGESGKSFDYSQS++T + S+ EQQ++AYLSKIQRGGHI
Sbjct: 11 SMSKAIAQYALDARLHAVYEQSGESGKSFDYSQSIKTTTDSIAEQQMTAYLSKIQRGGHI 70
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC IA+D TFRVIA+SENA E LGLAPQSVP+L+K EILTIGTDV+TLFT SS++L
Sbjct: 71 QPFGCMIAIDNTTFRVIAFSENARERLGLAPQSVPSLDKPEILTIGTDVKTLFTPSSALL 130
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQS 216
LE+AF AREITLLNP+W+HSKN+GKPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQS
Sbjct: 131 LERAFRAREITLLNPVWVHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 190
Query: 217 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPD 276
QKLAVRAIS LQ+LPGGDIKLLCDTVV++VR+LTGYDRVMVY+FHEDEHGEVVAESKRPD
Sbjct: 191 QKLAVRAISNLQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHEDEHGEVVAESKRPD 250
Query: 277 LEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAP 336
L+PY GLHYPATDIPQASRFLF+QNRVRMIVDCHA P+ V+QD+ LMQPLCLVGSTLRAP
Sbjct: 251 LDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHANPVRVVQDDNLMQPLCLVGSTLRAP 310
Query: 337 HGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------- 376
HGCHAQYMANMGSIASLALAVIINGN E+ GR T LW
Sbjct: 311 HGCHAQYMANMGSIASLALAVIINGN-EDGASGRGTMGLWGLVVCHHTSARCIPFPLRYA 369
Query: 377 ------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
AFGLQLN+ELQLASQ+ EK +LRTQTLLCDM+LRDSP GIVTQSPSIMDLVKCD
Sbjct: 370 CEFLMQAFGLQLNLELQLASQMLEKRILRTQTLLCDMILRDSPTGIVTQSPSIMDLVKCD 429
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYYQ KYYPLG+TPTE+QIKDIVEWL H DSTGLSTDSLADAGYP AA+LGDAVC
Sbjct: 430 GAALYYQEKYYPLGITPTESQIKDIVEWLSACHTDSTGLSTDSLADAGYPGAASLGDAVC 489
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMAVAYIT +DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF AFLEVVKSRS
Sbjct: 490 GMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKSRSS 549
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW+NAEMDAIHSLQLILRDSF+D + +NSKAVV Q+ ++ L+GVDELSSVAREMVRLIE
Sbjct: 550 PWENAEMDAIHSLQLILRDSFKDPDENNSKAVVKVQMEEMGLEGVDELSSVAREMVRLIE 609
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
TATAPIFAVDV G +NGWNAK+AELTGLSV EAMGKSLV DL+YKE EE V LL HAL+
Sbjct: 610 TATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVRDLIYKESEETVTKLLDHALQ 669
Query: 671 GEEDKNVEIKLRTF 684
GEEDKNVEIKLRTF
Sbjct: 670 GEEDKNVEIKLRTF 683
>gi|190586161|gb|ACE79197.1| phytochrome A-3 [Glycine max]
Length = 1122
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/1096 (52%), Positives = 771/1096 (70%), Gaps = 41/1096 (3%)
Query: 42 IAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
+AQ TVDA++HA FE+SG S S + ++ ++ +AYL+ +QRG IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKIIQP 81
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S+ L+
Sbjct: 82 FGCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQ 141
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
KA G E+ LLNP+ IH K +GKPFYAI+HRV ++ID EP + + ++ AGA+QS K
Sbjct: 142 KALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 201
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
LA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P LE
Sbjct: 202 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 321
Query: 339 CHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA----------------- 377
CHAQYMANM SIASL +AV++N N+E +A+ + RLW
Sbjct: 322 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 381
Query: 378 ---------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
F + +N E++L Q+ EK++LRTQTLLCD+++RD+P GIV++SP+IMDLVK
Sbjct: 382 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 441
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL Y+ K + LGVTP+E+QI++I WL YH DSTG STDSL+DAG+P A +LGD
Sbjct: 442 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSAPSLGDV 501
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDDG+RMHPRSSFK FL+VVK+R
Sbjct: 502 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 561
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDLELQGVDELSSVAREMV 606
SLPW E+DA+HSLQLILR++F+D E+ N+KA +N +L DL+++G+ EL +V E+V
Sbjct: 562 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKA-INTRLSDLKIEGMQELEAVTSEIV 620
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
RLIETAT PI AVDV G VNGWN K+AELTGL V EAMGK L+ LV + V +L+
Sbjct: 621 RLIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKMLN 679
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVM 726
AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV D+T QK VM
Sbjct: 680 LALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVM 739
Query: 727 DKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEV 786
DKF I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW R +++ KML+GE+
Sbjct: 740 DKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGEL 799
Query: 787 FGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNME 843
FG+ CRLK +A + L+ A G +TEK PF F RNGKYV+ LL+ +K++++E
Sbjct: 800 FGTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVE 859
Query: 844 GQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLE 903
G + G FCFLQ+ASPELQQAL +QR E+ RL L+Y+ ++I+NPL G+ F+ +LE
Sbjct: 860 GLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLE 919
Query: 904 ATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVM 963
T L +QKQLL TSA C++Q+ KI+ D DL+SI DG L+ E AEF L V+ +SQVM
Sbjct: 920 GTALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVM 979
Query: 964 MLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTL 1023
++++++ D+ E+I +YGD R+QQVLADFLL + ++P+ G V + T
Sbjct: 980 TKSNGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTPNG-GQVVVAGTLTK 1038
Query: 1024 KQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQ 1083
+Q + +V E + G G+P L+ MF ++ ++EG+ L + RK+LKLMNG+V+
Sbjct: 1039 EQLGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEEGISLLISRKLLKLMNGDVR 1098
Query: 1084 YIRESERCYFLIIFEL 1099
Y+RE+ + F++ EL
Sbjct: 1099 YLREAGKSAFILSAEL 1114
>gi|371940244|dbj|BAL45559.1| Phytochrome A2 [Glycine soja]
gi|371940246|dbj|BAL45560.1| Phytochrome A2 [Glycine soja]
gi|371940248|dbj|BAL45561.1| Phytochrome A2 [Glycine soja]
gi|371940250|dbj|BAL45562.1| Phytochrome A2 [Glycine soja]
gi|371940252|dbj|BAL45563.1| Phytochrome A2 [Glycine soja]
gi|371940256|dbj|BAL45565.1| Phytochrome A2 [Glycine soja]
gi|371940258|dbj|BAL45566.1| Phytochrome A2 [Glycine soja]
gi|371940262|dbj|BAL45568.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 1133 bits (2931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/1097 (52%), Positives = 771/1097 (70%), Gaps = 41/1097 (3%)
Query: 41 AIAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQ 97
A+A TVDA+LHA FE+SG S S + ++ ++ +AYL +Q+G IQ
Sbjct: 22 AMALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S+ L
Sbjct: 82 PFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
+KA G E++LLNP+ IH K +GKPFYAI+HRV ++ID EP + + ++ AGA+QS
Sbjct: 142 QKALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P L
Sbjct: 202 KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA---------------- 377
CHAQYMANM SIASL +AV++N N+E +A+ + RLW
Sbjct: 322 SCHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPL 381
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F + +N E++L Q+ EK++LRTQTLLCD+++RD+P GIV++SP+IMDLV
Sbjct: 382 RYACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLV 441
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAAL Y+ K + LGVTP+E+QI++I WL YH DSTG STDSL+DAG+P A +LGD
Sbjct: 442 KCDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGD 501
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDDG+RMHPRSSFK FL+VVK+
Sbjct: 502 VVCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKA 561
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDLELQGVDELSSVAREM 605
RSLPW E+DA+HSLQLILR++F+D E+ N+KA +N +L DL+++G+ EL +V E+
Sbjct: 562 RSLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKA-INTRLSDLKIEGMQELEAVTSEI 620
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETAT PI AVDV G VNGWN K+AELTGL V EAMGK L+ LV + V +L
Sbjct: 621 VRLIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKML 679
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
+ AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV D+T QK V
Sbjct: 680 NLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNV 739
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDKF I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW R +++ KML+GE
Sbjct: 740 MDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGE 799
Query: 786 VFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
+FG+ CRLK +A + L+ A G +TEK PF F RNGKYV+ LL+ +K++++
Sbjct: 800 LFGTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDV 859
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG + G FCFLQ+ASPELQQAL +QR E+ RL L+Y+ ++I+NPL G+ F+ +L
Sbjct: 860 EGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKML 919
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E T L +QKQLL TSA C++Q+ KI+ D DL+SI DG L+ E AEF L V+ +SQV
Sbjct: 920 EGTALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQV 979
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
M ++++++ D+ E+I +YGD R+QQVLADFLL + ++P+ G V + T
Sbjct: 980 MTKSNGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTPNG-GQVVVAGTLT 1038
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+Q + +V E + G G+P L+ MF ++ ++EG+ L + RK+LKLMNG+V
Sbjct: 1039 KEQLGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEEGISLLISRKLLKLMNGDV 1098
Query: 1083 QYIRESERCYFLIIFEL 1099
+Y+RE+ + F++ EL
Sbjct: 1099 RYLREAGKSAFILSAEL 1115
>gi|371941942|gb|ACE79196.2| phytochrome A-2 [Glycine max]
Length = 1130
Score = 1133 bits (2930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/1105 (51%), Positives = 769/1105 (69%), Gaps = 51/1105 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
+AQ TVDA++HA FE+SG S S + ++ ++ +AYL+++QRG IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNRMQRGKMIQP 81
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S L+
Sbjct: 82 FGCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQ 141
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
KA G +++LLNPI +H K +GKPFYAI+HRV +++D EP + + ++ AGA+QS K
Sbjct: 142 KALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
LA +AI++LQSLP G+++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P LE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQASRFLF++N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 339 CHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA----------------- 377
CHAQYMANM SIASL LAV++N N+E +AV + RLW
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLR 381
Query: 378 ---------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
F + ++ E++L Q+ EK++LRTQ LLC ML+RD+P GIV++SP+IMDLVK
Sbjct: 382 YACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVK 440
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL Y+ K + LGVTP+E QI++I WL YH DSTG STDSL DAG+P A +LGD
Sbjct: 441 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDV 500
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDD +RMHPRSSFKAFLEVVK+R
Sbjct: 501 VCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 560
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEAS---NSKAVVNAQLVDLELQGVD--------E 597
SLPW EMDAIHSLQ+ILR++F++ S N+KA +N +L DL+++G++ E
Sbjct: 561 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKA-INTRLSDLKIEGINDLKIERMQE 619
Query: 598 LSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEY 657
L +V E+VRLI+TAT PI AVDV G VNGWN K+AELTGL + EA GK L+ LV
Sbjct: 620 LEAVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLL-TLVEDSS 678
Query: 658 EEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQ 717
+ V +L+ AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV
Sbjct: 679 TDRVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAH 738
Query: 718 DVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDI 777
D+T QK VMDKFI I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW R ++
Sbjct: 739 DITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEV 798
Query: 778 IGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALL 834
+ KML+GE+FG+ CRLK +A + L+ A G +TEK PF F RNGKYV+ LL
Sbjct: 799 MDKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLL 858
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ +K++++EG + G FCFLQ+ASPELQQAL +QR E+ RL L+Y+ ++I+NPL G
Sbjct: 859 SVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCG 918
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+ F+ +LE TDL +QKQLL TSA C++Q+ KI+ D DL++I DG L+ E AEF L V
Sbjct: 919 IVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHEV 978
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ +SQVM ++++++ D+ I +YGD R+QQVLADFLL + ++P+ G
Sbjct: 979 LVTSLSQVMTKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTPNG-GQ 1037
Query: 1015 VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKI 1074
V + T +Q + +V E + G G+P L+ MF ++ ++EG+ L + RK+
Sbjct: 1038 VVVAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQMFGNNGLESEEGISLLISRKL 1097
Query: 1075 LKLMNGEVQYIRESERCYFLIIFEL 1099
LKLMNG+V+Y+RE+ + F++ EL
Sbjct: 1098 LKLMNGDVRYLREAGKSAFILSAEL 1122
>gi|37779206|gb|AAO86645.1| PHYA4 photoreceptor [Stellaria longipes]
Length = 1122
Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/1132 (50%), Positives = 770/1132 (68%), Gaps = 53/1132 (4%)
Query: 16 SAAQS-SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTM 74
S AQS S T++ R+ H+A + IAQ DA+LHA FE ES FDYS SVR
Sbjct: 3 SPAQSQSSTNSGRSKHSA-------RIIAQTIQDAKLHAEFE---ESSNEFDYSSSVRGS 52
Query: 75 SHSV-----PEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS 129
+ V ++ S+YL +IQ+G IQ FGC +A+D+ TFRVIA+SENA EML + +
Sbjct: 53 TSGVNQLPKSDKVTSSYLLQIQKGKFIQLFGCLLALDDKTFRVIAFSENAPEMLTMVSHA 112
Query: 130 VPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHR 189
VP++ ++ IGT++RT+FT S+ L+KA G +++LLNPI +H KN+GKPFYAI+HR
Sbjct: 113 VPSVGDLPVIGIGTNIRTIFTGPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHR 172
Query: 190 VDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQL 249
V +VID EP + + ++ AGA+QS KLA +AI++LQSLP G++ L DT+V+ V +L
Sbjct: 173 VTRSLVIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFEL 232
Query: 250 TGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDC 309
TGYDRVM Y+FH+D+HGEVV+E +P+L+ Y GLHYPATDIPQA+RFLF +N+VR+I DC
Sbjct: 233 TGYDRVMAYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDC 292
Query: 310 HATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG 369
A + V+QDE L L L GSTLRAPHGCHAQYM NM SI SL +AV++N D+E G
Sbjct: 293 RAKNVRVVQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGS 352
Query: 370 -----RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVL 398
RLW F + +N EL+L +Q EK +L
Sbjct: 353 APAQPHKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKIL 412
Query: 399 RTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEW 458
RTQTLLCDML+RD+P GIVTQ+P++MDLVKCDGAAL Y K + LG+TPT+ Q++DI W
Sbjct: 413 RTQTLLCDMLMRDAPLGIVTQNPNVMDLVKCDGAALLYNNKIWKLGITPTDYQLRDIAGW 472
Query: 459 LLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGG 518
L H DSTGLSTDSL DAGYP A +LGD VCGMA IT D LFWFRSHTA E+KWGG
Sbjct: 473 LSRDHTDSTGLSTDSLHDAGYPGARSLGDTVCGMAAVRITPNDMLFWFRSHTAAEVKWGG 532
Query: 519 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN 578
AKH +KDDG +MHPR+SFKAFLEVVK RS+PW + EMDAIHSLQLILR++F+D EAS+
Sbjct: 533 AKHETGEKDDGSKMHPRTSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDVEASD 592
Query: 579 -SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTG 637
+ +V+++++ DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K++ELTG
Sbjct: 593 LNTSVIHSKISDLQINGLRELEAVTSEMVRLIETATVPILAVDADGLVNGWNTKISELTG 652
Query: 638 LSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVV 697
+ V EA+GK + L + + V +L AL+GEE KNV+ +++ + + +VV
Sbjct: 653 VPVAEAVGKHIA-SLAEESSIDNVKRMLQLALQGEEKKNVQFEIKRHQSNPDSGPISLVV 711
Query: 698 NACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENT 757
NAC+SKD N+VGVC + QD+T QK VMDKF I+GDYKAI+ SPNPLIPPIF +DE
Sbjct: 712 NACASKDVNGNVVGVCLIAQDITGQKTVMDKFTRIEGDYKAIIQSPNPLIPPIFGTDEFG 771
Query: 758 CCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQD 814
CSEWN AM KLTGWSR ++I KML+GEVFG SCCRLK +A F I L+ A GQ+
Sbjct: 772 WCSEWNPAMAKLTGWSREEVIDKMLLGEVFGTHKSCCRLKNQEAFVNFGIILNGAMSGQN 831
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K P F R GKY++ LL NK+++ +G + G FCFLQ+AS +LQ AL +QR E+
Sbjct: 832 TDKLPIEFFTRFGKYIECLLCVNKKLDGDGAVTGVFCFLQLASHDLQHALHIQRLAEQAA 891
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
R K LAY+ ++IKNPLSG+ F+ +L+ T++ EDQ+Q+L+TS C+ Q+ KI+ D DL
Sbjct: 892 TKRAKALAYMKRQIKNPLSGIMFSGKILDGTEMGEDQRQVLQTSIRCQGQLNKILDDSDL 951
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
+SI DG E E EF + ++ A +SQVM E+ +Q+ + E +YGD R+Q
Sbjct: 952 DSIIDGYCELEMVEFTVQDILVASISQVMAKSSEKGIQMSNNCTEHGFKETLYGDSLRLQ 1011
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDM 1054
Q+LADFL V ++ S G + + VR T + E + + EFR++ G G+ EL+ +M
Sbjct: 1012 QILADFLSISVNFT-SPGGHIGVTVRLTKDKIGESVQLANLEFRIMHTGGGISEELLSEM 1070
Query: 1055 FHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGS 1106
F S +++G+ L + RK++KLMNG++QY+R + C F+I EL + S
Sbjct: 1071 FESRGNASEDGISLLISRKLVKLMNGDIQYLRSAGTCTFIIYVELAVADNSS 1122
>gi|359806634|ref|NP_001241532.1| phytochrome type A-like [Glycine max]
gi|190586157|gb|ACE79195.1| phytochrome A-1 [Glycine max]
gi|207367150|dbj|BAG72095.1| phytochrome A [Glycine max]
gi|371940264|dbj|BAL45569.1| Phytochrome A2 [Glycine max]
Length = 1123
Score = 1132 bits (2928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/1097 (52%), Positives = 770/1097 (70%), Gaps = 41/1097 (3%)
Query: 41 AIAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQ 97
A+A TVDA+LHA FE+SG S S + ++ ++ +AYL +Q+G IQ
Sbjct: 22 AMALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S+ L
Sbjct: 82 PFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
+KA G E+ LLNP+ IH K +GKPFYAI+HRV ++ID EP + + ++ AGA+QS
Sbjct: 142 QKALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P L
Sbjct: 202 KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA---------------- 377
CHAQYMANM SIASL +AV++N N+E +A+ + RLW
Sbjct: 322 SCHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPL 381
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F + +N E++L Q+ EK++LRTQTLLCD+++RD+P GIV++SP+IMDLV
Sbjct: 382 RYACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLV 441
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAAL Y+ K + LGVTP+E+QI++I WL YH DSTG STDSL+DAG+P A +LGD
Sbjct: 442 KCDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGD 501
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDDG+RMHPRSSFK FL+VVK+
Sbjct: 502 VVCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKA 561
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDLELQGVDELSSVAREM 605
RSLPW E+DA+HSLQLILR++F+D E+ N+KA +N +L DL+++G+ EL +V E+
Sbjct: 562 RSLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKA-INTRLSDLKIEGMQELEAVTSEI 620
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETAT PI AVDV G VNGWN K+AELTGL V EAMGK L+ LV + V +L
Sbjct: 621 VRLIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKML 679
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
+ AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV D+T QK V
Sbjct: 680 NLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNV 739
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDKF I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW R +++ KML+GE
Sbjct: 740 MDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGE 799
Query: 786 VFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
+FG+ CRLK +A + L+ A G +TEK PF F RNGKYV+ LL+ +K++++
Sbjct: 800 LFGTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDV 859
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG + G FCFLQ+ASPELQQAL +QR E+ RL L+Y+ ++I+NPL G+ F+ +L
Sbjct: 860 EGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKML 919
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E T L +QKQLL TSA C++Q+ KI+ D DL+SI DG L+ E AEF L V+ +SQV
Sbjct: 920 EGTALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQV 979
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
M ++++++ D+ E+I +YGD R+QQVLADFLL + ++P+ G V + T
Sbjct: 980 MTKSNGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTPNG-GQVVVAGTLT 1038
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+Q + +V E + G G+P L+ MF ++ ++EG+ L + RK+LKLMNG+V
Sbjct: 1039 KEQLGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEEGISLLISRKLLKLMNGDV 1098
Query: 1083 QYIRESERCYFLIIFEL 1099
+Y+RE+ + F++ EL
Sbjct: 1099 RYLREAGKSAFILSAEL 1115
>gi|207367148|dbj|BAG72094.1| phytochrome A [Glycine max]
gi|371940222|dbj|BAL45548.1| Phytochrome A1 [Glycine max]
gi|371940224|dbj|BAL45549.1| Phytochrome A1 [Glycine soja]
gi|371940226|dbj|BAL45550.1| Phytochrome A1 [Glycine soja]
gi|371940228|dbj|BAL45551.1| Phytochrome A1 [Glycine soja]
gi|371940230|dbj|BAL45552.1| Phytochrome A1 [Glycine soja]
gi|371940232|dbj|BAL45553.1| Phytochrome A1 [Glycine soja]
gi|371940234|dbj|BAL45554.1| Phytochrome A1 [Glycine soja]
gi|371940236|dbj|BAL45555.1| Phytochrome A1 [Glycine soja]
gi|371940238|dbj|BAL45556.1| Phytochrome A1 [Glycine max]
gi|371940240|dbj|BAL45557.1| Phytochrome A1 [Glycine max]
gi|371940242|dbj|BAL45558.1| Phytochrome A1 [Glycine max]
Length = 1130
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/1105 (51%), Positives = 768/1105 (69%), Gaps = 51/1105 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
+AQ TVDA++HA FE+SG S S + ++ ++ +AYL+ +QRG IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKMIQP 81
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S L+
Sbjct: 82 FGCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQ 141
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
KA G +++LLNPI +H K +GKPFYAI+HRV +++D EP + + ++ AGA+QS K
Sbjct: 142 KALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
LA +AI++LQSLP G+++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P LE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQASRFLF++N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 339 CHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA----------------- 377
CHAQYMANM SIASL LAV++N N+E +AV + RLW
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLR 381
Query: 378 ---------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
F + ++ E++L Q+ EK++LRTQ LLC ML+RD+P GIV++SP+IMDLVK
Sbjct: 382 YACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVK 440
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL Y+ K + LGVTP+E QI++I WL YH DSTG STDSL DAG+P A +LGD
Sbjct: 441 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDV 500
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDD +RMHPRSSFKAFLEVVK+R
Sbjct: 501 VCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 560
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEAS---NSKAVVNAQLVDLELQGVD--------E 597
SLPW EMDAIHSLQ+ILR++F++ S N+KA +N +L DL+++G++ E
Sbjct: 561 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKA-INTRLSDLKIEGINDLKIERMQE 619
Query: 598 LSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEY 657
L +V E+VRLI+TAT PI AVDV G VNGWN K+AELTGL + EA GK L+ LV
Sbjct: 620 LEAVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLL-TLVEDSS 678
Query: 658 EEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQ 717
+ V +L+ AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV
Sbjct: 679 TDRVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAH 738
Query: 718 DVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDI 777
D+T QK VMDKFI I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW R ++
Sbjct: 739 DITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEV 798
Query: 778 IGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALL 834
+ KML+GE+FG+ CRLK +A + L+ A G +TEK PF F RNGKYV+ LL
Sbjct: 799 MDKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLL 858
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ +K++++EG + G FCFLQ+ASPELQQAL +QR E+ RL L+Y+ ++I+NPL G
Sbjct: 859 SVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCG 918
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+ F+ +LE TDL +QKQLL TSA C++Q+ KI+ D DL++I DG L+ E AEF L V
Sbjct: 919 IVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHEV 978
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ +SQVM ++++++ D+ I +YGD R+QQVLADFLL + ++P+ G
Sbjct: 979 LVTSLSQVMTKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTPNG-GQ 1037
Query: 1015 VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKI 1074
V + T +Q + +V E + G G+P L+ MF ++ ++EG+ L + RK+
Sbjct: 1038 VVVAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQMFGNNGLESEEGISLLISRKL 1097
Query: 1075 LKLMNGEVQYIRESERCYFLIIFEL 1099
LKLMNG+V+Y+RE+ + F++ EL
Sbjct: 1098 LKLMNGDVRYLREAGKSAFILSAEL 1122
>gi|371940254|dbj|BAL45564.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 1131 bits (2926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/1097 (52%), Positives = 770/1097 (70%), Gaps = 41/1097 (3%)
Query: 41 AIAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQ 97
A+A TVDA+LHA FE+SG S S + ++ ++ +AYL +Q+G IQ
Sbjct: 22 AMALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S+ L
Sbjct: 82 PFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
+KA G E++LLNP+ IH K +GKPFYAI+HRV ++ID EP + + ++ AGA+QS
Sbjct: 142 QKALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P L
Sbjct: 202 KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA---------------- 377
CHAQYMANM SIASL +AV++N N+E +A+ + RLW
Sbjct: 322 SCHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPL 381
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F + +N E++L Q+ EK++LRTQTLLCD+++RD+P GIV++SP+IMDLV
Sbjct: 382 RYACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLV 441
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAAL Y+ K + LGVTP+E+QI++I WL YH DSTG STDSL+DAG+P A +LGD
Sbjct: 442 KCDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGD 501
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDDG+RMHPRSSFK FL+VVK+
Sbjct: 502 VVCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKA 561
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDLELQGVDELSSVAREM 605
RSLPW E+DA+HSLQLILR++F+D E+ N+KA +N +L DL+++G+ EL +V E+
Sbjct: 562 RSLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKA-INTRLSDLKIEGMQELEAVTSEI 620
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETAT PI AVDV G VNGWN K+AELTGL V EAMGK L+ LV + V +L
Sbjct: 621 VRLIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKML 679
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
+ AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV D+T QK V
Sbjct: 680 NLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNV 739
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDKF I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW R +++ KML+GE
Sbjct: 740 MDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGE 799
Query: 786 VFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
+FG+ CRLK +A + L+ A G +TEK PF F RNGKYV+ LL+ +K++++
Sbjct: 800 LFGTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDV 859
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG + G FCFLQ+ASPELQQAL +QR E+ RL L Y+ ++I+NPL G+ F+ +L
Sbjct: 860 EGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALNYMKRQIRNPLCGIIFSRKML 919
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E T L +QKQLL TSA C++Q+ KI+ D DL+SI DG L+ E AEF L V+ +SQV
Sbjct: 920 EGTALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQV 979
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
M ++++++ D+ E+I +YGD R+QQVLADFLL + ++P+ G V + T
Sbjct: 980 MTKSNGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTPNG-GQVVVAGTLT 1038
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+Q + +V E + G G+P L+ MF ++ ++EG+ L + RK+LKLMNG+V
Sbjct: 1039 KEQLGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEEGISLLISRKLLKLMNGDV 1098
Query: 1083 QYIRESERCYFLIIFEL 1099
+Y+RE+ + F++ EL
Sbjct: 1099 RYLREAGKSAFILSAEL 1115
>gi|240119407|dbj|BAH79252.1| phytochrome C [Cardamine nipponica]
gi|240119413|dbj|BAH79255.1| phytochrome C [Cardamine nipponica]
gi|240119415|dbj|BAH79256.1| phytochrome C [Cardamine nipponica]
gi|240119417|dbj|BAH79257.1| phytochrome C [Cardamine nipponica]
gi|240119421|dbj|BAH79259.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1105 (51%), Positives = 769/1105 (69%), Gaps = 53/1105 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYLSKIQRGG 94
S+ +Q+ VDA LH FE ES + FDYS SV + S +P +S YL KIQRG
Sbjct: 18 SRVTSQFLVDATLHRNFE---ESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGM 74
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E L+IGTDV++LF S S
Sbjct: 75 LIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGS 134
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
L+KA EI++LNPI +H ++ KPFYAILHR++ G+VIDLEP ++ ++ AGA+
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGAL 194
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
+S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FH+D HGEV+AE R
Sbjct: 195 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 254
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+ L GSTLR
Sbjct: 255 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 314
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVG-----GRSTTRLWA------------ 377
APHGCHAQYM+NMGS+ASL ++V IN +D + + GRS LW
Sbjct: 315 APHGCHAQYMSNMGSVASLVMSVTINCSDSDDMNRDLQTGRS---LWGLVVCHHASPRFM 371
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
FG+Q+N E + A L EK +L+TQ++LCDML R++P GI+TQSP+I
Sbjct: 372 PFPLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNI 431
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAAL+Y+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GYP A+
Sbjct: 432 MDLVKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDAS 491
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
LG+++CGMA YIT++DFLFWFRS AKEIKWGGA+H P D+ DG+RMHPRSSFKAF+E
Sbjct: 492 VLGESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFME 550
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK V N VD +Q VDEL +
Sbjct: 551 IVRWKSMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVN 607
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E V N
Sbjct: 608 EMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSAETVTN 666
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L ALKG E++ EI++R FG + + + +VVN C S+D NN++GVCF+GQDVT QK
Sbjct: 667 MLALALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQK 726
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+ + + +QGDY I+ S + LIPPIF ++E+ CSEWN AM+KL+G R + + KML+
Sbjct: 727 TLTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLL 786
Query: 784 GEVFGS---CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALLTANKR 839
GEVF S C +K D LTK IAL+ GQ + EK F + R+G +++ALL+ANKR
Sbjct: 787 GEVFTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKR 846
Query: 840 VNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTN 899
++EG++ G CFLQ+ SPELQ AL VQR E+ L +LAY+ QE+KNP +SF
Sbjct: 847 TDIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQ 906
Query: 900 SLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVV 959
+ L + L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E +EF L + AVV
Sbjct: 907 NSLHTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVV 966
Query: 960 SQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW-VEIH 1018
QV L ER +Q+I D P EI ++ +YGD R+QQ+L++ LL+ + ++P+ +G V
Sbjct: 967 KQVTELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFK 1026
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCRKILKL 1077
V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +K++KL
Sbjct: 1027 VIARVEAIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKL 1086
Query: 1078 M-NGEVQYIRESERCYFLIIFELPM 1101
M G ++Y+RESE F+I+ E P+
Sbjct: 1087 MERGTLRYLRESEMSAFVILTEFPL 1111
>gi|240119419|dbj|BAH79258.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1105 (51%), Positives = 768/1105 (69%), Gaps = 53/1105 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYLSKIQRGG 94
S+ +Q+ VDA LH FE ES + FDYS SV + S +P +S YL KIQRG
Sbjct: 18 SRVTSQFLVDATLHRNFE---ESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGM 74
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E L+IGTDV++LF S S
Sbjct: 75 LIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGS 134
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
L+KA EI++LNPI +H ++ KPFYAILHR++ G+VIDLEP ++ ++ AGA+
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGAL 194
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
+S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FH+D HGEV+AE R
Sbjct: 195 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 254
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+ L GSTLR
Sbjct: 255 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 314
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVG-----GRSTTRLWA------------ 377
APHGCHAQYM+NMGS+ASL ++V IN D + + GRS LW
Sbjct: 315 APHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRS---LWGLVVCHHASPRFV 371
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
FG+Q+N E + A L EK +L+TQ++LCDML R++P GI+TQSP+I
Sbjct: 372 PFPLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNI 431
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAAL+Y+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GYP A+
Sbjct: 432 MDLVKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDAS 491
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
LG+++CGMA YIT++DFLFWFRS AKEIKWGGA+H P D+ DG+RMHPRSSFKAF+E
Sbjct: 492 VLGESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFME 550
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK V N VD +Q VDEL +
Sbjct: 551 IVRWKSMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVN 607
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E V N
Sbjct: 608 EMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSAETVTN 666
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L ALKG E++ EI++R FG + + + +VVN C S+D NN++GVCF+GQDVT QK
Sbjct: 667 MLALALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQK 726
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+ + + +QGDY I+ S + LIPPIF ++E+ CSEWN AM+KL+G R + + KML+
Sbjct: 727 TLTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLL 786
Query: 784 GEVFGS---CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALLTANKR 839
GEVF S C +K D LTK IAL+ GQ + EK F + R+G +++ALL+ANKR
Sbjct: 787 GEVFTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKR 846
Query: 840 VNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTN 899
++EG++ G CFLQ+ SPELQ AL VQR E+ L +LAY+ QE+KNP +SF
Sbjct: 847 TDIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQ 906
Query: 900 SLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVV 959
+ L + L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E +EF L + AVV
Sbjct: 907 NSLHTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVV 966
Query: 960 SQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW-VEIH 1018
QV L ER +Q+I D P EI ++ +YGD R+QQ+L++ LL+ + ++P+ +G V
Sbjct: 967 KQVTELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFK 1026
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCRKILKL 1077
V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +K++KL
Sbjct: 1027 VIARVEAIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKL 1086
Query: 1078 M-NGEVQYIRESERCYFLIIFELPM 1101
M G ++Y+RESE F+I+ E P+
Sbjct: 1087 MERGTLRYLRESEMSAFVILTEFPL 1111
>gi|240119425|dbj|BAH79261.1| phytochrome C [Cardamine resedifolia]
Length = 1112
Score = 1130 bits (2922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/1105 (50%), Positives = 768/1105 (69%), Gaps = 53/1105 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYLSKIQRGG 94
S+ +Q VDA LH FE ES + FDYS SV + S +P +S YL IQRG
Sbjct: 18 SRVTSQVLVDATLHRNFE---ESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQNIQRGM 74
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E L+IGTDV++LF S S
Sbjct: 75 LIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGS 134
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
L+KA EI++LNPI +H ++ KPFYAILHR++ G++IDLEP ++ ++ AGA+
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLLIDLEPVSPDEVPVTAAGAL 194
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
+S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FH+D HGEV+AE R
Sbjct: 195 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 254
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+ L GSTLR
Sbjct: 255 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 314
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVG-----GRSTTRLWA------------ 377
APHGCHAQYM+NMGS+ASL ++V IN D + + GRS LW
Sbjct: 315 APHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRS---LWGLVVCHHASPRFV 371
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
FG+Q+N E + A L EK +L+TQ++LCDML R++P GI+TQSP+I
Sbjct: 372 PFPLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNI 431
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLV+CDGAAL+Y+ K + LGVTPTETQI+D++ W+L HG +TG +T+SL ++GYP A+
Sbjct: 432 MDLVECDGAALFYRDKLWSLGVTPTETQIRDLIHWVLKSHGGNTGFTTESLMESGYPDAS 491
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
LG+++CGMA YIT++DFLFWFRS AKEIKWGGA+H P D+ DG+RMHPRSSFKAF+E
Sbjct: 492 VLGESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFME 550
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK V N VD +Q VDEL +
Sbjct: 551 IVRWKSMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVN 607
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E V N
Sbjct: 608 EMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSAETVTN 666
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L ALKG E++ EI++R FG + + ++++VVN C S+D NN++GVCF+GQDVT QK
Sbjct: 667 MLALALKGSEERGAEIRIRAFGPKRKSSSIYLVVNTCCSRDRKNNVLGVCFIGQDVTGQK 726
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+ + + +QGDY I+ S + LIPPIF ++E+ CSEWN AM+KL+G R + + KML+
Sbjct: 727 TLTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLL 786
Query: 784 GEVFGS---CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALLTANKR 839
GEVF S C +K D LTK IAL+ GQ + EK F + R+G +++ALL+ANKR
Sbjct: 787 GEVFTSNEYGCPVKDHDTLTKMRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKR 846
Query: 840 VNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTN 899
++EG++ G CFLQ+ SPELQ AL VQR E+ L +LAY+ QE+KNP +SF
Sbjct: 847 TDIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQ 906
Query: 900 SLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVV 959
+ L + L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E +EF L + AVV
Sbjct: 907 NSLNTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVV 966
Query: 960 SQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW-VEIH 1018
QV L ER +Q+I D P EI ++ +YGD R+QQ+L++ LL+ +R++P+ +G V
Sbjct: 967 KQVTELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLRFTPAMKGLCVSFK 1026
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCRKILKL 1077
V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +K++KL
Sbjct: 1027 VIARVEAIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKL 1086
Query: 1078 M-NGEVQYIRESERCYFLIIFELPM 1101
M G ++Y+RESE F+I+ E P+
Sbjct: 1087 MERGTLRYLRESEMSAFVILTEFPL 1111
>gi|240119423|dbj|BAH79260.1| phytochrome C [Cardamine nipponica]
Length = 1111
Score = 1129 bits (2921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1105 (51%), Positives = 767/1105 (69%), Gaps = 53/1105 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYLSKIQRGG 94
S+ +Q+ VDA LH FE ES + FDYS SV + S +P +S YL KIQRG
Sbjct: 17 SRVTSQFLVDATLHRNFE---ESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGM 73
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E L+IGTDV++LF S S
Sbjct: 74 LIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGS 133
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
L+KA EI++LNPI +H ++ KPFYAILHR++ G+VIDLEP ++ ++ AGA+
Sbjct: 134 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGAL 193
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
+S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FH+D HGEV+AE R
Sbjct: 194 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 253
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+ L GSTLR
Sbjct: 254 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 313
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVG-----GRSTTRLWA------------ 377
APHGCHAQYM+NMGS+ASL ++V IN D + + GRS LW
Sbjct: 314 APHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRS---LWGLVVCHHASPRFV 370
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
FG+Q+N E + A L EK +L+TQ++LCDML R++P GI+TQSP+I
Sbjct: 371 PFPLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNI 430
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAAL+Y+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GYP A+
Sbjct: 431 MDLVKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDAS 490
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
G+++CGMA YIT++DFLFWFRS AKEIKWGGA+H P D+ DG+RMHPRSSFKAF+E
Sbjct: 491 VFGESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFME 549
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK V N VD +Q VDEL +
Sbjct: 550 IVRWKSMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVN 606
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E V N
Sbjct: 607 EMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSAETVTN 665
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L ALKG E++ EI++R FG + + + +VVN C S+D NN++GVCF+GQDVT QK
Sbjct: 666 MLALALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQK 725
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+ + + +QGDY I+ S + LIPPIF ++E+ CSEWN AM+KL+G R + + KML+
Sbjct: 726 TLTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLL 785
Query: 784 GEVFGS---CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALLTANKR 839
GEVF S C +K D LTK IAL+ GQ + EK F + R+G +++ALL+ANKR
Sbjct: 786 GEVFTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKR 845
Query: 840 VNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTN 899
++EG++ G CFLQ+ SPELQ AL VQR E+ L +LAY+ QE+KNP +SF
Sbjct: 846 TDIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQ 905
Query: 900 SLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVV 959
+ L + L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E +EF L + AVV
Sbjct: 906 NSLHTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVV 965
Query: 960 SQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW-VEIH 1018
QV L ER +Q+I D P EI ++ +YGD R+QQ+L++ LL+ + ++P+ +G V
Sbjct: 966 KQVTELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFK 1025
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCRKILKL 1077
V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +K++KL
Sbjct: 1026 VIARVEAIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKL 1085
Query: 1078 M-NGEVQYIRESERCYFLIIFELPM 1101
M G ++Y+RESE F+I+ E P+
Sbjct: 1086 MERGTLRYLRESEMSAFVILTEFPL 1110
>gi|371940260|dbj|BAL45567.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/1097 (52%), Positives = 770/1097 (70%), Gaps = 41/1097 (3%)
Query: 41 AIAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQ 97
A+A TVDA+LHA FE+SG S S + ++ ++ +AYL +Q+G IQ
Sbjct: 22 AMALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S+ L
Sbjct: 82 PFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
+KA G E++LLNP+ IH K +GKPFYAI+HRV ++ID EP + + ++ AGA+QS
Sbjct: 142 QKALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P L
Sbjct: 202 KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
E Y GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 ELYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA---------------- 377
CHAQYMANM SIASL +AV++N N+E +A+ + RLW
Sbjct: 322 SCHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPL 381
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F + +N E++L Q+ EK++LRTQTLLCD+++RD+P GIV++SP+IMDLV
Sbjct: 382 RYACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLV 441
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAAL Y+ K + LGVTP+E+QI++I WL YH DSTG STDSL+DAG+P A +LGD
Sbjct: 442 KCDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGD 501
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDDG+RMHPRSSFK FL+VVK+
Sbjct: 502 VVCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKA 561
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDLELQGVDELSSVAREM 605
RSLPW E+DA+HSLQLILR++F+D E+ N+KA +N +L DL+++G+ EL +V E+
Sbjct: 562 RSLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKA-INTRLSDLKIEGMQELEAVTSEI 620
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETAT PI AVDV G VNGWN K+AELTGL V EAMGK L+ LV + V +L
Sbjct: 621 VRLIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKML 679
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
+ AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV D+T QK V
Sbjct: 680 NLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNV 739
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDKF I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW R +++ KML+GE
Sbjct: 740 MDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGE 799
Query: 786 VFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
+FG+ CRLK +A + L+ A G +TEK PF F RNGKYV+ LL+ +K++++
Sbjct: 800 LFGTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDV 859
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG + G FCFLQ+ASPELQQAL +QR E+ RL L+Y+ ++I+NPL G+ F+ +L
Sbjct: 860 EGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKML 919
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQV 962
E T L +QKQLL TSA C++Q+ KI+ D DL+SI DG L+ E AEF L V+ +SQV
Sbjct: 920 EGTALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQV 979
Query: 963 MMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPT 1022
M ++++++ D+ E+I +YGD R+QQVLADFLL + ++P+ G V + T
Sbjct: 980 MTKSNGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTPNG-GQVVVAGTLT 1038
Query: 1023 LKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+Q + +V E + G G+P L+ MF ++ ++EG+ L + RK+LKLMNG+V
Sbjct: 1039 KEQLGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEEGISLLISRKLLKLMNGDV 1098
Query: 1083 QYIRESERCYFLIIFEL 1099
+Y+RE+ + F++ EL
Sbjct: 1099 RYLREAGKSAFILSAEL 1115
>gi|371940220|dbj|BAL45547.1| Phytochrome A1 [Glycine max]
Length = 1130
Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/1105 (51%), Positives = 767/1105 (69%), Gaps = 51/1105 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
+AQ TVDA++HA FE+SG S S + ++ ++ +AYL+ +QRG IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKMIQP 81
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S L+
Sbjct: 82 FGCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQ 141
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
KA G +++LLNPI +H K +GKPFYAI+HRV +++D EP + + ++ AGA+QS K
Sbjct: 142 KALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
LA +AI++LQSLP G+++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P LE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQASRFLF++N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 339 CHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA----------------- 377
CHAQYMANM SIASL LAV++N N+E +AV + RLW
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLR 381
Query: 378 ---------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
F + ++ E++L Q+ EK++LRTQ LLC ML+RD+P GIV++SP+IMDLVK
Sbjct: 382 YACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVK 440
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL Y+ K + LGVTP+E QI++I WL YH DSTG STDSL DAG+P A +LGD
Sbjct: 441 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDV 500
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA +T + +FWFRSHTA EI+WGGAKH +KDD +RMHPRSSFKAFLEVVK+R
Sbjct: 501 VCGMASVRVTAKGMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 560
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEAS---NSKAVVNAQLVDLELQGVD--------E 597
SLPW EMDAIHSLQ+ILR++F++ S N+KA +N +L DL+++G++ E
Sbjct: 561 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKA-INTRLSDLKIEGINDLKIERMQE 619
Query: 598 LSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEY 657
L +V E+VRLI+TAT PI AVDV G VNGWN K+AELTGL + EA GK L+ LV
Sbjct: 620 LEAVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLL-TLVEDSS 678
Query: 658 EEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQ 717
+ V +L+ AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV
Sbjct: 679 TDRVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAH 738
Query: 718 DVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDI 777
D+T QK VMDKFI I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW R ++
Sbjct: 739 DITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEV 798
Query: 778 IGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALL 834
+ KML+GE+FG+ CRLK +A + L+ A G +TEK PF F RNGKYV+ LL
Sbjct: 799 MDKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLL 858
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ +K++++EG + G FCFLQ+ASPELQQAL +QR E+ RL L+Y+ ++I+NPL G
Sbjct: 859 SVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCG 918
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+ F+ +LE TDL +QKQLL TSA C++Q+ KI+ D DL++I DG L+ E AEF L V
Sbjct: 919 IVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHEV 978
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ +SQVM ++++++ D+ I +YGD R+QQVLADFLL + ++P+ G
Sbjct: 979 LVTSLSQVMTKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTPNG-GQ 1037
Query: 1015 VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKI 1074
V + T +Q + +V E + G G+P L+ MF ++ ++EG+ L + RK+
Sbjct: 1038 VVVAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQMFGNNGLESEEGISLLISRKL 1097
Query: 1075 LKLMNGEVQYIRESERCYFLIIFEL 1099
LKLMNG+V+Y+RE+ + F++ EL
Sbjct: 1098 LKLMNGDVRYLREAGKSAFILSAEL 1122
>gi|240119411|dbj|BAH79254.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1105 (51%), Positives = 767/1105 (69%), Gaps = 53/1105 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYLSKIQRGG 94
S+ +Q+ VDA LH FE ES + FDYS SV + S +P +S YL KIQRG
Sbjct: 18 SRVTSQFLVDATLHRNFE---ESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGM 74
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC I VDE +VIA+SEN EMLG P +VP++E++E L+IGTDV++LF S S
Sbjct: 75 LIQPFGCLIVVDEKNLKVIAFSENTEEMLGSIPHTVPSMEQREALSIGTDVKSLFQSPGS 134
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
L+KA EI++LNPI +H ++ KPFYAILHR++ G+VIDLEP ++ ++ AGA+
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGAL 194
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
+S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FH+D HGEV+AE R
Sbjct: 195 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 254
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+ L GSTLR
Sbjct: 255 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 314
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVG-----GRSTTRLWA------------ 377
APHGCHAQYM+NMGS+ASL ++V IN D + + GRS LW
Sbjct: 315 APHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRS---LWGLVVCHHASPRFV 371
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
FG+Q+N E + A L EK +L+TQ++LCDML R++P GI+TQSP+I
Sbjct: 372 PFPLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNI 431
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAAL+Y+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GYP A+
Sbjct: 432 MDLVKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDAS 491
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
LG+++CGMA YIT++DFLFWFRS AKEIKWGGA+H P D+ DG+RMHPRSSFKAF+E
Sbjct: 492 VLGESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFME 550
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK V N VD +Q VDEL +
Sbjct: 551 IVRWKSMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVN 607
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E V N
Sbjct: 608 EMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSAETVTN 666
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L ALKG E++ EI++R FG + + + +VVN C S+D NN++GVCF+GQDVT QK
Sbjct: 667 MLALALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQK 726
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+ + + +QGDY I+ S + LIPPIF ++E+ CSEWN AM+KL+G R + + KML+
Sbjct: 727 TLTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLL 786
Query: 784 GEVFGS---CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALLTANKR 839
GEVF S C +K D LTK IAL+ GQ + EK F + R+G +++ALL+ANKR
Sbjct: 787 GEVFTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKR 846
Query: 840 VNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTN 899
++EG++ G CFLQ+ SPELQ AL VQR E+ L +LAY+ QE+KNP +SF
Sbjct: 847 TDIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAITCALDKLAYLRQEVKNPEKAISFLQ 906
Query: 900 SLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVV 959
+ L + L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E +EF L + AVV
Sbjct: 907 NSLHTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVV 966
Query: 960 SQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW-VEIH 1018
QV L ER +Q+I D P EI ++ +YGD R+QQ+L++ LL+ + ++P+ +G V
Sbjct: 967 KQVTELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFK 1026
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCRKILKL 1077
V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +K++KL
Sbjct: 1027 VIARVEAIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKL 1086
Query: 1078 M-NGEVQYIRESERCYFLIIFELPM 1101
M G ++Y+RESE F+I+ E P+
Sbjct: 1087 MERGTLRYLRESEMSAFVILTEFPL 1111
>gi|240119409|dbj|BAH79253.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1105 (51%), Positives = 767/1105 (69%), Gaps = 53/1105 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYLSKIQRGG 94
S+ +Q+ VDA LH FE ES + FDYS SV + S +P +S YL KIQRG
Sbjct: 18 SRVTSQFLVDATLHRNFE---ESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGM 74
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC I VDE +VIA+SEN EMLG P +VP++E++E L+IGTDV++LF S S
Sbjct: 75 LIQPFGCLIVVDEKNLKVIAFSENTEEMLGSIPHTVPSMEQREALSIGTDVKSLFQSPGS 134
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
L+KA EI++LNPI +H ++ KPFYAILHR++ G+VIDLEP ++ ++ AGA+
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGAL 194
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
+S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FH+D HGEV+AE R
Sbjct: 195 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 254
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+ L GSTLR
Sbjct: 255 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 314
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVG-----GRSTTRLWA------------ 377
APHGCHAQYM+NMGS+ASL ++V IN D + + GRS LW
Sbjct: 315 APHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRS---LWGLVVCHHASPRFV 371
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
FG+Q+N E + A L EK +L+TQ++LCDML R++P GI+TQSP+I
Sbjct: 372 PFPLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNI 431
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAAL+Y+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GYP A+
Sbjct: 432 MDLVKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDAS 491
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
LG+++CGMA YIT++DFLFWFRS AKEIKWGGA+H P D+ DG+RMHPRSSFKAF+E
Sbjct: 492 VLGESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFME 550
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK V N VD +Q VDEL +
Sbjct: 551 IVRWKSMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVN 607
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E V N
Sbjct: 608 EMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSAETVTN 666
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L ALKG E++ EI++R FG + + + +VVN C S+D NN++GVCF+GQDVT QK
Sbjct: 667 MLALALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQK 726
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+ + + +QGDY I+ S + LIPPIF ++E+ CSEWN AM+KL+G R + + KML+
Sbjct: 727 TLTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLL 786
Query: 784 GEVFGS---CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALLTANKR 839
GEVF S C +K D LTK IAL+ GQ + EK F + R+G +++ALL+ANKR
Sbjct: 787 GEVFTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKR 846
Query: 840 VNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTN 899
++EG++ G CFLQ+ SPELQ AL VQR E+ L +LAY+ QE+KNP +SF
Sbjct: 847 TDIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQ 906
Query: 900 SLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVV 959
+ L + L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E +EF L + AVV
Sbjct: 907 NSLHTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVV 966
Query: 960 SQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW-VEIH 1018
QV L ER +Q+I D P EI ++ +YGD R+QQ+L++ LL+ + ++P+ +G V
Sbjct: 967 KQVTELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFK 1026
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMT-QEGLGLSMCRKILKL 1077
V ++ + V EFR++ P GLP +LV++MF R T +EGLGL + +K++KL
Sbjct: 1027 VIARVEAIGKRMKRVELEFRVIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKL 1086
Query: 1078 M-NGEVQYIRESERCYFLIIFELPM 1101
M G ++Y+RESE F+I+ E P+
Sbjct: 1087 MERGTLRYLRESEMSAFVILTEFPL 1111
>gi|37779204|gb|AAO86644.1| PHYA3 photoreceptor [Stellaria longipes]
Length = 1123
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/1131 (51%), Positives = 770/1131 (68%), Gaps = 60/1131 (5%)
Query: 16 SAAQS-SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTM 74
S AQS S T++ R+ H+A + IAQ DA+LHA FE ES FDYS SVR
Sbjct: 3 SPAQSQSSTNSGRSKHSA-------RIIAQTIQDAKLHAEFE---ESSNEFDYSSSVRGS 52
Query: 75 SHSV-----PEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS 129
+ V ++ S+YL +IQ+G IQPFGC +A+D+ TFRVIA+SENA EML + +
Sbjct: 53 TSGVNQLPQSDKVTSSYLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHA 112
Query: 130 VPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHR 189
VP++ ++ IGTD+RT+FT S+ L+KA G +++LLNPI +H KN+GKPFYAI+HR
Sbjct: 113 VPSVGDLPVIGIGTDIRTIFTDPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHR 172
Query: 190 VDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQL 249
V +VID EP + + ++ AGA+QS KLA +AI++LQSLP G++ L DT+V+ V +L
Sbjct: 173 VTRSLVIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFEL 232
Query: 250 TGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDC 309
TGYDRVM Y+FH+D+HGEVV+E +P+L+ Y GLHYPATDIPQA+RFLF +N+VR+I DC
Sbjct: 233 TGYDRVMAYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDC 292
Query: 310 HATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG 369
A + V+QDE L L L GSTLRAPHGCHAQYM NM SI SL +AV++N D+E G
Sbjct: 293 RAKNVRVVQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGS 352
Query: 370 -----RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVL 398
RLW F + +N EL+L SQ EK +L
Sbjct: 353 APAQPHKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELESQFLEKKIL 412
Query: 399 RTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEW 458
RTQTLLCDML+RD+P GIVTQ+P++MDLVKCDGAAL Y K + LG++PT+ Q++DI W
Sbjct: 413 RTQTLLCDMLMRDAPLGIVTQNPNVMDLVKCDGAALLYNNKIWKLGISPTDYQLRDIAGW 472
Query: 459 LLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGG 518
L H DSTGLSTDSL DAGYP A +LGD VCGMA IT + LFWFRSHTA E+KWGG
Sbjct: 473 LSRDHTDSTGLSTDSLHDAGYPGARSLGDTVCGMAAVRITLNNMLFWFRSHTAAEVKWGG 532
Query: 519 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN 578
AKH +KDDG +MHPR+SFKAFLEVVK RS+PW + EMDAIHSLQLILR++F+D EAS+
Sbjct: 533 AKHETGEKDDGSKMHPRTSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDVEASD 592
Query: 579 -SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTG 637
+ +V+++++ DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+ ELTG
Sbjct: 593 LNTSVIHSKISDLQINGLRELEAVTSEMVRLIETATVPILAVDADGLVNGWNTKIFELTG 652
Query: 638 LSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVV 697
+ V EA+GK + L + + V +L AL+GEE KNV+ +++ + + +VV
Sbjct: 653 VPVAEAVGKHIA-SLAEESSIDNVKRMLQLALQGEEKKNVQFEIKRHQSNPDSSPISLVV 711
Query: 698 NACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENT 757
NAC+SKD N+VGVC + QD+T QK VMDKF I+GDYKAI+ SPNPLIPPIF +DE
Sbjct: 712 NACASKDVNGNVVGVCLITQDITGQKTVMDKFTRIEGDYKAIIQSPNPLIPPIFGTDEFG 771
Query: 758 CCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQD 814
CSEWN AM KLTGWSR ++I KML+GEVFG SCCRLK +A F I L+ A GQ+
Sbjct: 772 WCSEWNPAMAKLTGWSREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNFGIILNGAMSGQN 831
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
T+K P F R GKY++ LL NK+++ +G + G FCFLQ+AS +LQ AL +QR E+
Sbjct: 832 TDKLPIEFFTRFGKYIECLLCVNKKLDGDGAVTGVFCFLQLASHDLQHALHIQRLAEQAA 891
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
R K LAY+ ++IKNPLSG+ F+ +L+ T++ EDQ+Q+L+TS C+ Q+ KI+ D DL
Sbjct: 892 TKRAKALAYMKRQIKNPLSGIMFSGKILDGTEMGEDQRQVLQTSIRCQGQLNKILDDSDL 951
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEE--IKTLAVYGDQAR 992
+SI DG E E EF + ++ A QVM E+ +Q+ D E +K +YGD R
Sbjct: 952 DSIIDGYCELEMVEFTVQDILVASTCQVMAKSNEKGIQIANDSTTEHGLKE-TLYGDSLR 1010
Query: 993 IQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN--EFRMVCPGEGLPPEL 1050
+QQ+LADFL V ++P A G V I VR L + G++I H EFR+ G G+ EL
Sbjct: 1011 LQQILADFLWISVNFTP-AGGNVGIKVR--LTKDKIGESIQHANLEFRISHTGGGISEEL 1067
Query: 1051 VQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
+ MF + +++EG+ L + RKI+KLMNG+VQY+R + F+I EL +
Sbjct: 1068 LSQMFENQGEVSEEGISLLVSRKIVKLMNGDVQYLRSAGSSTFIISVELAI 1118
>gi|38037208|gb|AAR08426.1| phytochrome A [Orobanche minor]
Length = 1123
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1120 (50%), Positives = 769/1120 (68%), Gaps = 49/1120 (4%)
Query: 27 RAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRT------MSHSVPE 80
R+ N+ +S ++ IAQ ++DA+L A FE ESG SFDYS SVR +S +
Sbjct: 8 RSSTNSAQSRQSARIIAQTSIDAKLDADFE---ESGSSFDYSTSVRVTNYPAGLSEPRSD 64
Query: 81 QQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILT 140
+ +AYL +IQ+G IQ FGC +A+DE TFRVIAYSENA EML + +VP++ +L
Sbjct: 65 KVTTAYLHQIQKGKLIQQFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPLLG 124
Query: 141 IGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP 200
IG+D+RT+FT+ S+ L+KA G E++LLNPI +H K +GKPFYAI+HRV ++ID EP
Sbjct: 125 IGSDIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEP 184
Query: 201 ARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRF 260
+ + ++ AGA+QS KLA +AI+ LQ+LPGG I+ LCDT+V+ V +LTGYDRVM+Y+F
Sbjct: 185 VKPHEVPMTAAGALQSYKLAAKAIACLQALPGGSIERLCDTMVQQVFELTGYDRVMIYKF 244
Query: 261 HEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDE 320
HED+HGEV E +P LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + V+QD+
Sbjct: 245 HEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQDD 304
Query: 321 GLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE----AVGGRSTTRLW 376
L L L GSTLRAPHGCH+QYM NM SIASL ++V++N DE+ + G RLW
Sbjct: 305 NLPFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEGDEDGPDSSSGPYKRKRLW 364
Query: 377 A--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
F + +N EL+L +Q+ EK++LRTQTLLCD+LLR
Sbjct: 365 GLVVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELELENQMLEKNILRTQTLLCDLLLR 424
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
D P GIV+QSP++MDLVKCDGA L ++ Y LG+TPT+ QI+DIV WL YH DSTGLS
Sbjct: 425 DVPLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIVSWLDEYHQDSTGLS 484
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSL DAG+P A LG+A+CGMA IT D+LFWFRSHTA EI+WGGAKH E KDDG+
Sbjct: 485 TDSLYDAGFPGALALGNALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEAKDDGR 544
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV-VNAQLVD 589
+MHPRSSF+AFLEVVK+RSLPW + EMD IHSLQLILR++++++E + ++ ++A+L +
Sbjct: 545 KMHPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHARLNE 604
Query: 590 LELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLV 649
L++ GV E+ +V EMVRLIETAT PIF+V V G VNGWN K+++LTGLSV EA+G +
Sbjct: 605 LQIDGVKEIEAVTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVVEAIGMHFL 664
Query: 650 HDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNI 709
LV + V +L AL+G+E+ +V+ +++T G + + ++VNAC+SKD N+
Sbjct: 665 A-LVEDSSADTVSKMLGLALQGKEEHDVQFEIKTHGQRSESGPISLIVNACASKDVKENV 723
Query: 710 VGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKL 769
VGVCF+ QD+T QK +MDKF I+GDY++I+ +PNPLIPPIF +DE CSEWN AM KL
Sbjct: 724 VGVCFIAQDITTQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGTDEFGWCSEWNAAMIKL 783
Query: 770 TGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRN 826
+GW R +I KML+GEVFG +CCRLK +A + L+N GQ++ K F F R+
Sbjct: 784 SGWGREAVIDKMLLGEVFGLNKACCRLKNQEAYVNLGVVLNNTVTGQESGKVSFGFFSRS 843
Query: 827 GKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQ 886
GKYV LL +K+V+ EG + G FCFLQ+ASPELQQAL +QR E+ RL+ LAYI +
Sbjct: 844 GKYVACLLCVSKKVDSEGSVTGLFCFLQLASPELQQALHIQRISEQTASKRLRVLAYIRR 903
Query: 887 EIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEK 946
EI++PLSG+ F+ L+E TDL ++QK ++ TS C+ QM KI++D DL+ I +G L+ E
Sbjct: 904 EIRSPLSGIIFSRKLMEGTDLNDEQKNIVRTSLHCQSQMNKILEDTDLDHIIEGYLDLEM 963
Query: 947 AEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVR 1006
EF L V+ A +SQV+ + ++++ ++ + +YGD R+QQVLA FLL V
Sbjct: 964 VEFKLHEVLIASISQVISKSNGKGIKIVDNLAPNLSNETLYGDSLRLQQVLAAFLLIAVD 1023
Query: 1007 YSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRM-VCPGEGLPPELVQDMFHSSRW-MTQE 1064
+PS ++ V TL + S G+ + + G G+P E++ MF +++
Sbjct: 1024 STPSGG---QLGVAATLAKDSIGEFVQLGRLECRITHGGGVPQEILNQMFGDEPTDASED 1080
Query: 1065 GLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
G+ L + RK++KLM G++QY+RE+ R F+I E+ + +
Sbjct: 1081 GISLFISRKLVKLMKGDIQYLREAGRSTFIISVEIAISNK 1120
>gi|339778383|gb|AEK06073.1| phytochrome B2 [Populus balsamifera]
gi|339778385|gb|AEK06074.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/634 (85%), Positives = 575/634 (90%), Gaps = 26/634 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKAIAQYTVDA+LHAVFEQSG +G+SFDYS+SVRT + SVPEQQI+AYLSKIQRGGHI
Sbjct: 3 SVSKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHI 62
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC IA DE +FRVIAYSENA +MLGL PQSVP+LEKQEIL +G DVR LF SS+VL
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQS 216
LEKAFGAREITLLNPIWIHSKN+GKPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQS
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 217 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPD 276
QKLAVRAISQLQSLPGGDIKLLCDTVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 277 LEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAP 336
LEPY GLHYP+TDIPQASRFLFKQNRVRMIVDCHA P+ VIQDE LMQPLCLVGSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 337 HGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------- 376
HGCHAQYM NMGSIASLA+AVII GNDEEA+GGR++ RLW
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYA 362
Query: 377 ------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
AFGLQLNMELQLASQL EKHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCD
Sbjct: 363 CEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCD 422
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYYQG+YYPLGVTPTE QIKDIVEWLLT HGD TGLSTDSLADAGYP AA LGDAVC
Sbjct: 423 GAALYYQGQYYPLGVTPTEXQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVC 482
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMAVAYI +RDFLFWFRSHTAKE+KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL
Sbjct: 483 GMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 542
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW+NAEMDAIHSLQLILRDSFRDAEA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIE
Sbjct: 543 PWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIE 602
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
TATAPIFAVDV G +NGWNAKVAELTGLSVEEAM
Sbjct: 603 TATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 258/310 (83%), Positives = 282/310 (90%)
Query: 802 FMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQ 861
FMIALHNA GG DT+K PF FDRN K VQ LLTANKRVNMEG I+GAFCFLQIASPELQ
Sbjct: 794 FMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQ 853
Query: 862 QALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAAC 921
Q L VQ+QQEKK FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAAC
Sbjct: 854 QTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAAC 913
Query: 922 EKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEI 981
EKQ+LKII+D+DLESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEI
Sbjct: 914 EKQILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEI 973
Query: 982 KTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVC 1041
KTLAVYGDQARIQQVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EF++VC
Sbjct: 974 KTLAVYGDQARIQQVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFKIVC 1033
Query: 1042 PGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
PGEGLPPELVQDMFHSSRW+TQEGLGLSMCRKILKLMNGEVQYIRESERCYFL++ E+PM
Sbjct: 1034 PGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPM 1093
Query: 1102 PRRGSKSITD 1111
P++ K D
Sbjct: 1094 PQKVGKGAAD 1103
>gi|339778357|gb|AEK06060.1| phytochrome B2 [Populus balsamifera]
gi|339778359|gb|AEK06061.1| phytochrome B2 [Populus balsamifera]
gi|339778361|gb|AEK06062.1| phytochrome B2 [Populus balsamifera]
gi|339778363|gb|AEK06063.1| phytochrome B2 [Populus balsamifera]
gi|339778365|gb|AEK06064.1| phytochrome B2 [Populus balsamifera]
gi|339778367|gb|AEK06065.1| phytochrome B2 [Populus balsamifera]
gi|339778369|gb|AEK06066.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/634 (85%), Positives = 575/634 (90%), Gaps = 26/634 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKAIAQYTVDA+LHAVFEQSG +G+SFDYS+SVRT + SVPEQQI+AYLSKIQRGGHI
Sbjct: 3 SVSKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHI 62
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC IA DE +FRVIAYSENA +MLGL PQSVP+LEKQEIL +G DVR LF SS+VL
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQS 216
LEKAFGAREITLLNPIWIHSKN+GKPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQS
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 217 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPD 276
QKLAVRAISQLQSLPGGDIKLLCDTVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 277 LEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAP 336
LEPY GLHYP+TDIPQASRFLFKQNRVRMIVDCHA P+ VIQDE LMQPLCLVGSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 337 HGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------- 376
HGCHAQYM NMGSIASLA+AVII GNDEEA+GGR++ RLW
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYA 362
Query: 377 ------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
AFGLQLNMELQLASQL EKHVLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCD
Sbjct: 363 CEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCD 422
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYYQG+YYPLGVTPTE QIKDIVEWLLT HGD TGLSTDSLADAGYP AA LGDAVC
Sbjct: 423 GAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVC 482
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMAVAYI +RDFLFWFRSHTAKE+KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL
Sbjct: 483 GMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 542
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW+NAEMDAIHSLQLILRDSFRDAEA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIE
Sbjct: 543 PWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIE 602
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
TATAPIFAVDV G +NGWNAKVAELTGLSVEEAM
Sbjct: 603 TATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 258/310 (83%), Positives = 282/310 (90%)
Query: 802 FMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQ 861
FMIALHNA GG DT+K PF FDRN K VQ LLTANKRVNMEG I+GAFCFLQIASPELQ
Sbjct: 794 FMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQ 853
Query: 862 QALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAAC 921
Q L VQ+QQEKK FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAAC
Sbjct: 854 QTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAAC 913
Query: 922 EKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEI 981
EKQ+LKII+D+DLESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEI
Sbjct: 914 EKQILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEI 973
Query: 982 KTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVC 1041
KTLAVYGDQARIQQVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EF++VC
Sbjct: 974 KTLAVYGDQARIQQVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFKIVC 1033
Query: 1042 PGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
PGEGLPPELVQDMFHSSRW+TQEGLGLSMCRKILKLMNGEVQYIRESERCYFL++ E+PM
Sbjct: 1034 PGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPM 1093
Query: 1102 PRRGSKSITD 1111
P++ K D
Sbjct: 1094 PQKVGKGAAD 1103
>gi|309256335|gb|ADO60995.1| phytochrome b [Helianthus annuus]
Length = 683
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/674 (80%), Positives = 593/674 (87%), Gaps = 27/674 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
++SKAIAQY +DARLHAV+EQSGESGKSFDYSQS++T + S+ EQQ++AYLSKIQRGGHI
Sbjct: 11 SMSKAIAQYALDARLHAVYEQSGESGKSFDYSQSIKTTTDSIAEQQMTAYLSKIQRGGHI 70
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC IA+D TFRVIA+SENA E LGLAPQSVP+L+K EILTIGTDV+TLFT SS++L
Sbjct: 71 QPFGCMIAIDNTTFRVIAFSENARERLGLAPQSVPSLDKPEILTIGTDVKTLFTPSSALL 130
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQS 216
LE+AF AREITLLNP+W+HSKN+GKPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQS
Sbjct: 131 LERAFRAREITLLNPVWVHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 190
Query: 217 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPD 276
QKLAVRAIS LQ+LPGGDIKLLCDTVV++VR+LTGYDRVMVY+FHEDEHGEVVAESKRPD
Sbjct: 191 QKLAVRAISNLQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHEDEHGEVVAESKRPD 250
Query: 277 LEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAP 336
L+PY GLHYPATDIPQASRFLF+QNRVRMIVDCHA P+ V+QD+ LMQPLCLVGSTLRAP
Sbjct: 251 LDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHANPVRVVQDDNLMQPLCLVGSTLRAP 310
Query: 337 HGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------- 376
HGCHAQYMANMGSIASLALAVIINGN E+ GR T LW
Sbjct: 311 HGCHAQYMANMGSIASLALAVIINGN-EDGASGRGTMGLWGLVVCHHTSARCIPFPLRYA 369
Query: 377 ------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
AFGLQLN+ELQLASQ+ EK +LRTQTLLCDM+LRDSP GIVTQSPSIMDLVKCD
Sbjct: 370 CEFLMQAFGLQLNLELQLASQMLEKRILRTQTLLCDMILRDSPTGIVTQSPSIMDLVKCD 429
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYYQ KYYPLG+TPTE+QIKDIVEWL H DSTGLSTDSLADAGY AA+LGDAVC
Sbjct: 430 GAALYYQEKYYPLGITPTESQIKDIVEWLSACHTDSTGLSTDSLADAGYXGAASLGDAVC 489
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMAVAYIT +DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF AFLEVVKSRS
Sbjct: 490 GMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKSRSS 549
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
W+NAEMDAIHSLQLILRDSF+D + + SKAVV Q+ ++ L+GVDELSSVAREMVRLIE
Sbjct: 550 XWENAEMDAIHSLQLILRDSFKDPDENXSKAVVKVQMXEMGLEGVDELSSVAREMVRLIE 609
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
TATAPIFAVDV G +NGWNAK+AELTGLSV EAMGKSLV DL+YKE EE V LL HAL+
Sbjct: 610 TATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVRDLIYKESEETVTKLLDHALQ 669
Query: 671 GEEDKNVEIKLRTF 684
GEEDKNVEIKL TF
Sbjct: 670 GEEDKNVEIKLXTF 683
>gi|339778351|gb|AEK06057.1| phytochrome B2 [Populus balsamifera]
gi|339778353|gb|AEK06058.1| phytochrome B2 [Populus balsamifera]
gi|339778355|gb|AEK06059.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/634 (85%), Positives = 575/634 (90%), Gaps = 26/634 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKAIAQYTVDA+LHAVFEQSG +G+SFDYS+SVRT + SVPEQQI+AYLSKIQRGGHI
Sbjct: 3 SVSKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHI 62
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC IA DE +FRVIAYSENA +MLGL PQSVP+LEKQEIL +G DVR LF SS+VL
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQS 216
LEKAFGAREITLLNPIWIHSKN+GKPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQS
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 217 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPD 276
QKLAVRAISQLQSLPGGDIKLLCDTVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 277 LEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAP 336
LEPY GLHYP+TDIPQASRFLFKQNRVRMIVDCHA P+ VIQDE LMQPLCLVGSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 337 HGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------- 376
HGCHAQYM NMGSIASLA+AVII GNDEEA+GGR++ RLW
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYA 362
Query: 377 ------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
AFGLQLNMELQLASQL EKHVLRTQTLLCDMLLR+SP GIVTQSPSIMDLVKCD
Sbjct: 363 CEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRESPTGIVTQSPSIMDLVKCD 422
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYYQG+YYPLGVTPTE QIKDIVEWLLT HGD TGLSTDSLADAGYP AA LGDAVC
Sbjct: 423 GAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVC 482
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMAVAYI +RDFLFWFRSHTAKE+KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL
Sbjct: 483 GMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 542
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW+NAEMDAIHSLQLILRDSFRDAEA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIE
Sbjct: 543 PWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIE 602
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
TATAPIFAVDV G +NGWNAKVAELTGLSVEEAM
Sbjct: 603 TATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 258/310 (83%), Positives = 282/310 (90%)
Query: 802 FMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQ 861
FMIALHNA GG DT+K PF FDRN K VQ LLTANKRVNMEG I+GAFCFLQIASPELQ
Sbjct: 794 FMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQ 853
Query: 862 QALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAAC 921
Q L VQ+QQEKK FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAAC
Sbjct: 854 QTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAAC 913
Query: 922 EKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEI 981
EKQ+LKII+D+DLESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEI
Sbjct: 914 EKQILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEI 973
Query: 982 KTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVC 1041
KTLAVYGDQARIQQVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EF++VC
Sbjct: 974 KTLAVYGDQARIQQVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFKIVC 1033
Query: 1042 PGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
PGEGLPPELVQDMFHSSRW+TQEGLGLSMCRKILKLMNGEVQYIRESERCYFL++ E+PM
Sbjct: 1034 PGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPM 1093
Query: 1102 PRRGSKSITD 1111
P++ K D
Sbjct: 1094 PQKVGKGAAD 1103
>gi|339778371|gb|AEK06067.1| phytochrome B2 [Populus balsamifera]
gi|339778373|gb|AEK06068.1| phytochrome B2 [Populus balsamifera]
gi|339778375|gb|AEK06069.1| phytochrome B2 [Populus balsamifera]
gi|339778379|gb|AEK06071.1| phytochrome B2 [Populus balsamifera]
gi|339778381|gb|AEK06072.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/634 (85%), Positives = 574/634 (90%), Gaps = 26/634 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKAIAQYTVDA+LHAVFEQSG +G+SFDYS+SVRT + SVPEQQI+AYLSKIQRGGHI
Sbjct: 3 SVSKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHI 62
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC IA DE +FRVIAYSENA +MLGL PQSVP+LEKQEIL +G DVR LF SS+VL
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQS 216
LEKAFGAREITLLNPIWIHSKN+GKPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQS
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 217 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPD 276
QKLAVRAISQLQSLPGGDIKLLCDTVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 277 LEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAP 336
LEPY GLHYP+TDIPQASRFLFKQNRVRMIVDCHA P+ VIQDE LMQPLCLVGSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 337 HGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------- 376
HGCHAQYM NMGSIASLA+AVII GNDEEA+GGR++ RLW
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYA 362
Query: 377 ------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
AFGLQLNMELQLASQL EKHVLRTQTLLCDMLLR SP GIVTQSPSIMDLVKCD
Sbjct: 363 CEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRXSPTGIVTQSPSIMDLVKCD 422
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYYQG+YYPLGVTPTE QIKDIVEWLLT HGD TGLSTDSLADAGYP AA LGDAVC
Sbjct: 423 GAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVC 482
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMAVAYI +RDFLFWFRSHTAKE+KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL
Sbjct: 483 GMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 542
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW+NAEMDAIHSLQLILRDSFRDAEA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIE
Sbjct: 543 PWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIE 602
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
TATAPIFAVDV G +NGWNAKVAELTGLSVEEAM
Sbjct: 603 TATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 258/310 (83%), Positives = 282/310 (90%)
Query: 802 FMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQ 861
FMIALHNA GG DT+K PF FDRN K VQ LLTANKRVNMEG I+GAFCFLQIASPELQ
Sbjct: 794 FMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQ 853
Query: 862 QALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAAC 921
Q L VQ+QQEKK FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAAC
Sbjct: 854 QTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAAC 913
Query: 922 EKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEI 981
EKQ+LKII+D+DLESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEI
Sbjct: 914 EKQILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEI 973
Query: 982 KTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVC 1041
KTLAVYGDQARIQQVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EF++VC
Sbjct: 974 KTLAVYGDQARIQQVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFKIVC 1033
Query: 1042 PGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
PGEGLPPELVQDMFHSSRW+TQEGLGLSMCRKILKLMNGEVQYIRESERCYFL++ E+PM
Sbjct: 1034 PGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPM 1093
Query: 1102 PRRGSKSITD 1111
P++ K D
Sbjct: 1094 PQKVGKGAAD 1103
>gi|339778377|gb|AEK06070.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/634 (85%), Positives = 574/634 (90%), Gaps = 26/634 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHI 96
+VSKAIAQYTVDA+LHAVFEQSG +G+SFDYS+SVRT + SVPZQQI+AYLSKIQRGGHI
Sbjct: 3 SVSKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPZQQITAYLSKIQRGGHI 62
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC IA DE +FRVIAYSENA +MLGL PQSVP+LEKQEIL +G DVR LF SS+VL
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQS 216
LEKAFGAREITLLNPIWIHSKN+GKPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQS
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 217 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPD 276
QKLAVRAISQLQSLPGGDIKLLCDTVV+SVR+LTGYDRVMVY+FHEDEHGEVVAE+KR D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 277 LEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAP 336
LEPY GLHYP+TDIPQASRFLFKQNRVRMIVDCHA P+ VIQDE LMQPLCLVGSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 337 HGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------- 376
HGCHAQYM NMGSIASLA+AVII GNDEEA+GGR++ RLW
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYA 362
Query: 377 ------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 430
AFGLQLNMELQLASQL EKHVLRTQTLLCDMLLR SP GIVTQSPSIMDLVKCD
Sbjct: 363 CEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRXSPTGIVTQSPSIMDLVKCD 422
Query: 431 GAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVC 490
GAALYYQG+YYPLGVTPTE QIKDIVEWLLT HGD TGLSTDSLADAGYP AA LGDAVC
Sbjct: 423 GAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVC 482
Query: 491 GMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 550
GMAVAYI +RDFLFWFRSHTAKE+KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL
Sbjct: 483 GMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 542
Query: 551 PWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIE 610
PW+NAEMDAIHSLQLILRDSFRDAEA+NSKAVV+ QL D+ELQG+DELSSVAREMVRLIE
Sbjct: 543 PWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIE 602
Query: 611 TATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
TATAPIFAVDV G +NGWNAKVAELTGLSVEEAM
Sbjct: 603 TATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 258/310 (83%), Positives = 282/310 (90%)
Query: 802 FMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQ 861
FMIALHNA GG DT+K PF FDRN K VQ LLTANKRVNMEG I+GAFCFLQIASPELQ
Sbjct: 794 FMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQ 853
Query: 862 QALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAAC 921
Q L VQ+QQEKK FAR+KELAYICQEIKNPLSG+ FTNSLLE TDLTEDQ+Q LETSAAC
Sbjct: 854 QTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAAC 913
Query: 922 EKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEI 981
EKQ+LKII+D+DLESIE+GSLE EKAEFLLGSVINAVVSQ M+LLRERNLQL+RDIPEEI
Sbjct: 914 EKQILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEI 973
Query: 982 KTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVC 1041
KTLAVYGDQARIQQVLADFLLNMVRY+PS+ GWVEIHV PTLKQ S+G T+VH EF++VC
Sbjct: 974 KTLAVYGDQARIQQVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFKIVC 1033
Query: 1042 PGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPM 1101
PGEGLPPELVQDMFHSSRW+TQEGLGLSMCRKILKLMNGEVQYIRESERCYFL++ E+PM
Sbjct: 1034 PGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPM 1093
Query: 1102 PRRGSKSITD 1111
P++ K D
Sbjct: 1094 PQKVGKGAAD 1103
>gi|1730565|sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A
gi|556667|emb|CAA53165.1| phytochrome A [Petroselinum crispum]
Length = 1129
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/1122 (50%), Positives = 757/1122 (67%), Gaps = 64/1122 (5%)
Query: 27 RAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMS-----HSVPEQ 81
RA+ NA +T T+DA++HA FE ESG SFDYS SVR S S+
Sbjct: 15 RANQNARVVLT--------TLDAKIHADFE---ESGNSFDYSSSVRVTSAVGENSSIQSN 63
Query: 82 QIS-AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILT 140
+++ AYL IQ+G IQP GC +AVDE +F+++AYSENA EML + +VP++ + +L
Sbjct: 64 KLTTAYLHHIQKGKLIQPVGCLLAVDEKSFKIMAYSENAPEMLTMVSHAVPSVGEHPVLG 123
Query: 141 IGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP 200
IGTDVRT+FT+ S+ L+KA G +I LLNPI +H K +GKPFYAI HRV ++ID EP
Sbjct: 124 IGTDVRTIFTAPSAAALQKAVGFTDINLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEP 183
Query: 201 ARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRF 260
+ + ++ AGA+QS KLA +A+++LQ+LPGG ++ LCDT+V+ V +LTGYDRVM Y+F
Sbjct: 184 VKPYEVPMTAAGALQSYKLASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMAYKF 243
Query: 261 HEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDE 320
H+D+HGEV AE +P LEPYFGLHYPATD+PQA+RFLF +N+VRMI DC A V+QDE
Sbjct: 244 HDDDHGEVTAEVTKPGLEPYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVLQDE 303
Query: 321 GLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE--EAVGGRS--TTRLW 376
L L L GSTLRAPH CH QYM NM SIASL +AV+IN +DE E+ S + +LW
Sbjct: 304 KLPFELTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSKKLW 363
Query: 377 A--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
F + ++ EL+L +Q+ EK++LRTQTLLCD+L+R
Sbjct: 364 GLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDLLMR 423
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
D+P GIV+QSP++MDLVKCDGAAL Y+ K Y LG TP++ Q++DIV WL YH DSTGLS
Sbjct: 424 DAPLGIVSQSPNMMDLVKCDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDSTGLS 483
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSL DAGYP A LGD VCGMAV IT D LFWFRSH A I+WGGAK P++ DG+
Sbjct: 484 TDSLYDAGYPGALALGDVVCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGR 543
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSF--------RDAEASNSKAV 582
+MHPRSSFKAFLEVVK+RS W EMDAIHSLQLILR + + E ++ V
Sbjct: 544 KMHPRSSFKAFLEVVKTRSTTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTDV 603
Query: 583 VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEE 642
++ +L DL+++G+ EL +V EMVRLIETAT PIFAVD VNGWN K+AELTGL V++
Sbjct: 604 IHTKLNDLKIEGIQELEAVTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQ 663
Query: 643 AMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSS 702
AMGK L+ LV V LL AL+G+E++ + + +T+G+ + VVVNAC++
Sbjct: 664 AMGKHLL-TLVEDSSVGTVVFLLALALQGKEEQGIPFEFKTYGSREDSVPITVVVNACAT 722
Query: 703 KDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
+ +N+VGVCFV QDVT QK +MDKF IQGDYKAIV +PNPLIPPIF +DE CSEW
Sbjct: 723 RGLHDNVVGVCFVAQDVTSQKTIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 782
Query: 763 NTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFP 819
N AM +L+GW R D++ KML+GE+FG SCC LK +A + L+NA GQ +EK
Sbjct: 783 NQAMTELSGWRREDVMNKMLLGEIFGIQTSCCHLKSKEAFVNLGVVLNNALTGQISEKIC 842
Query: 820 FPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLK 879
F F +GKYV+ LL A+K+++ EG + G FCFLQ+AS ELQQAL +QR E+ RLK
Sbjct: 843 FSFFATDGKYVECLLCASKKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKRLK 902
Query: 880 ELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIED 939
L+Y+ ++ KNPL G++F LE + E+Q +L TS C++ + KI+ D DL+SI D
Sbjct: 903 TLSYLRRQAKNPLCGINFVREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSIID 962
Query: 940 GSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLAD 999
G L+ E +EF L V A SQV M + +Q++ + EE+ + +YGD R+Q+VLAD
Sbjct: 963 GYLDLEMSEFRLHDVYVASRSQVSMRSNGKAIQVVDNFSEEMMSETLYGDSLRLQKVLAD 1022
Query: 1000 FLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFHS 1057
F+ V +P G + I V TL + + GQ++ VH EFR+ G G+P E V MF S
Sbjct: 1023 FMSVCVNLTPVG-GHLGISV--TLTEDNLGQSVQLVHLEFRITHTGAGVPEEAVSQMFGS 1079
Query: 1058 SRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
++EG+ L + RK++KLMNG+V Y+RE+ + F+I EL
Sbjct: 1080 DSETSEEGISLLISRKLVKLMNGDVHYLREAGKSTFIITVEL 1121
>gi|38037178|gb|AAR08425.1| phytochrome A [Cuscuta pentagona]
Length = 1119
Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/1109 (50%), Positives = 767/1109 (69%), Gaps = 55/1109 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ------ISAYLSKIQR 92
++ IAQ ++DA+LHA FE ESG SFDYS S+R S + EQ+ +AYL +IQ+
Sbjct: 20 ARIIAQTSIDAKLHAEFE---ESGDSFDYSSSIRVTSVNTGEQKPRSDKVTTAYLHQIQK 76
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSS 152
IQPFGC +A+DE TFRVIA+SENA +ML + +VP++ +L IGTD+RT+FT+
Sbjct: 77 AKFIQPFGCLLALDEKTFRVIAFSENAPDMLTMVSHAVPSVGDLPVLGIGTDIRTIFTAP 136
Query: 153 SSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG 212
S L+KA G E++LLNPI +H K +GKPFYAI+HRV +++D EP + + ++ AG
Sbjct: 137 SGAALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEAPMTAAG 196
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AI++LQSLP G ++ CDT+V+ V +LTGYDRVM Y+FH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAIARLQSLPSGSLERFCDTIVQEVFELTGYDRVMAYKFHDDDHGEVVSEI 256
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + V+QDE L+ L L GST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCQAKHVKVVQDEKLLFDLTLCGST 316
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT----RLWA----------- 377
LRAPH CH QYM NM SIASL +A+++N D+E RS + RLW
Sbjct: 317 LRAPHTCHLQYMENMNSIASLVMAIVVNDGDDEEEEERSGSGKRKRLWGLVVCHNTTPRF 376
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIV--TQS 420
F + +N EL+L +Q+ EK++LRTQTLLCD+LLRD+ GIV +QS
Sbjct: 377 VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDILLRDAVLGIVSQSQS 436
Query: 421 PSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYP 480
P++MDLVKCDGA L Y+ K + LG+TPT+ Q++DIV L +H DSTGLSTDSL DAG+P
Sbjct: 437 PNMMDLVKCDGAVLLYKSKIHRLGITPTDFQLQDIVYRLNEHHMDSTGLSTDSLYDAGFP 496
Query: 481 KAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 540
A +LG +CGMA I+++D+LFWFRSHTA E++WGG KH P DDG++MHPRSSFKA
Sbjct: 497 GALSLG--LCGMASVRISEKDWLFWFRSHTASEVRWGGVKHEP---DDGRKMHPRSSFKA 551
Query: 541 FLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSS 600
FLEVV++RSLPW + EMD IHSLQLI+R++F + + + V++A+L DL + G+ EL +
Sbjct: 552 FLEVVETRSLPWKDYEMDGIHSLQLIMRNAFFNEADTVATNVIHAKLNDLRIDGLQELEA 611
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
V EMVRLIETA PI AV V G VNGWN K+AELTGLSV+EA+G L+ LV
Sbjct: 612 VTSEMVRLIETAMVPIIAVGVDGLVNGWNTKIAELTGLSVDEAIGNHLL-TLVEDSSVHT 670
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVT 720
V +L+ AL+GEE+KNV+ ++ T G + + +VVNAC+S+D ++VGVCF+ QD+T
Sbjct: 671 VKKMLNLALQGEEEKNVQFEIMTHGIRSECGPISLVVNACASRDVQESVVGVCFIAQDIT 730
Query: 721 DQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGK 780
QK VMDKF I+GDY+AI+ +PNPLIPPIF +DE CSEWN+AM KL+GW R ++I K
Sbjct: 731 GQKTVMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEWNSAMTKLSGWRRDEVIDK 790
Query: 781 MLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTAN 837
M++GEVFG+ CCRLK +A + L+NA G +++K F RNGKYV+ LL+
Sbjct: 791 MVLGEVFGTQKACCRLKSHEAFVTLGVVLNNAITGHESDKTVFGFCTRNGKYVECLLSVT 850
Query: 838 KRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSF 897
KR+N +G ++G FCFLQ+AS ELQQAL Q+ E+ RLK LAY+ +++KNPLSG+ F
Sbjct: 851 KRLNQDGAVIGLFCFLQLASQELQQALHFQKLSEQTATKRLKVLAYLRKQVKNPLSGIMF 910
Query: 898 TNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINA 957
+ +LE T+L DQ+ +L TSA C++Q+ K++ D DL+ I +G L+ E EF L V+ A
Sbjct: 911 SRKMLEGTELGNDQQNILHTSAQCQQQLSKVLDDTDLDCIIEGYLDLEMVEFKLDEVLLA 970
Query: 958 VVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEI 1017
+SQVM ++L++I D+ E + +YGD R+QQVLA+FL V ++PS ++
Sbjct: 971 SISQVMTKSNGKSLRVINDVAENVLCETLYGDSLRLQQVLAEFLSVAVNFTPSGG---QL 1027
Query: 1018 HVRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKIL 1075
V +L + GQ++ H EFR+ G G+P EL+ MF S +EG+ L + R ++
Sbjct: 1028 AVSSSLTKDHLGQSVQLAHLEFRVTHSGGGVPEELLTQMFGSDVDALEEGISLLVSRNLV 1087
Query: 1076 KLMNGEVQYIRESERCYFLIIFELPMPRR 1104
KLMNG+VQY RE+ R F+I EL + +
Sbjct: 1088 KLMNGDVQYHREAGRSAFIISVELAVATK 1116
>gi|3914343|sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A
gi|2664190|emb|CAA04679.1| phytochrome A [Populus tremula x Populus tremuloides]
Length = 1125
Score = 1119 bits (2894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/1111 (51%), Positives = 760/1111 (68%), Gaps = 49/1111 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVP---EQQISAYLSKIQRGGH 95
++ IAQ TVDA+LHA FE+SG S + ++ P ++ +AYL IQ+G
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +A+DE TFRV+AYSENA E+L + +VP++ + +L IGTD+RT+FT+ S+
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
L+KA G +++LLNPI +H K +GKPFYAI+HRV ++ID EP + + ++ AGA+Q
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR M Y+FH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDE-----EAVGGRSTTRLWA------------- 377
PH CH QYM NM SIASL +AV++N DE ++ + RLW
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 378 -------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIM 424
F + +N EL+L +Q+ EK++LRTQTLLCDML+RD+P GIVTQSP+IM
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 425 DLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAAT 484
DLVKCDGA L+Y+ K + LG+TP++ Q++DI WL YH DSTGLSTDSL DAGYP A
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 485 LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 544
LGD VCGMA IT +D LFWFRS TA EI+WGGAKH P +KDDG+RMHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 545 VKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSVAR 603
VK+RSLPW + EMDAIHSLQLILR++F+D E + ++A+L DL+++G+ EL +V
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLIETAT PI AVDV G VNGWN K++ELTGL V++A+GK L+ LV +IV
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLL-TLVEDSSVDIVKR 678
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L AL+G+E++N++ +++T G+++ + +VVNAC+S+D N+VGVCFVGQD+T QK
Sbjct: 679 MLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQK 738
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+VMDKF I+GDYKAIV + NPLIPPIF +DE CSEWN AM LTGW R +++ KML+
Sbjct: 739 MVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLL 798
Query: 784 GEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRV 840
GEVFG +CCRLK +A + L+ A GQ++EK F F R GKYV+ LL +K++
Sbjct: 799 GEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKL 858
Query: 841 NMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNS 900
+ EG + G FCFLQ+AS ELQQAL VQR E+ RLK LAY+ ++I NPLSG+ F+
Sbjct: 859 DREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGK 918
Query: 901 LLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVS 960
++E T+L +QK+LL TSA C+ Q+ KI+ D DL+SI +G L+ E EF L S
Sbjct: 919 MMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREYYGCYQS 978
Query: 961 QVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVR 1020
E+ + +I D + +TL YGD R+QQVLADF + +PS + V
Sbjct: 979 S-HDEKHEKGIPIINDALKMAETL--YGDSIRLQQVLADFCRCQLILTPSGG---LLTVS 1032
Query: 1021 PTLKQSSEGQ---TIVHN-EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILK 1076
+ Q G +VH+ + R+ G G+P LV M+ + EG+ L + RK++K
Sbjct: 1033 ASFFQRPVGAILFILVHSGKLRIRHLGAGIPEALVDQMYGEDTGASVEGISLVISRKLVK 1092
Query: 1077 LMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
LMNG+V+Y+RE+ + F+I EL + K
Sbjct: 1093 LMNGDVRYMREAGKSSFIISVELAGGHKSQK 1123
>gi|37723871|gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]
Length = 1118
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/1107 (50%), Positives = 753/1107 (68%), Gaps = 54/1107 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGC 101
IAQ TVDA+L A F+ G FDYSQS+R ++++AYL IQRG IQPFGC
Sbjct: 23 IAQTTVDAKLDAEFDAMG---TCFDYSQSIRAPPDEQRSEKVTAYLQHIQRGKLIQPFGC 79
Query: 102 TIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAF 161
+A+DE TF+V+A+SENA EML + +VP++ + IGTDVR LFTS S+ L+KA
Sbjct: 80 LLALDEKTFKVLAFSENAPEMLTMVSFTVPSVGDHPTIVIGTDVRNLFTSPSTAALQKAL 139
Query: 162 GAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAV 221
G E++LLNPI +H K++G+PFYAI+HRV +++D EP + D ++ AGA+QS KLA
Sbjct: 140 GFAEVSLLNPILVHCKSSGRPFYAIVHRVTGCLIVDFEPVKPNDVPMTAAGALQSYKLAA 199
Query: 222 RAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYF 281
+AIS+LQSLP G ++ LC+TV+E V +LTGYDRVMVY+FHED+HGEV AE +P LE YF
Sbjct: 200 KAISKLQSLPSGSMEKLCNTVIEEVFELTGYDRVMVYKFHEDDHGEVFAEITKPGLESYF 259
Query: 282 GLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHA 341
GLHYPATDIPQA+RFLF +N+VRMI DCHA + V QD+ L + GSTLRAPH CH
Sbjct: 260 GLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVYQDKKLPFDISFCGSTLRAPHSCHL 319
Query: 342 QYMANMGSIASLALAVIIN------GND-EEAVGGRSTTRLWA----------------- 377
QYM NM SIASL +AV++N GN+ EE RLW
Sbjct: 320 QYMENMNSIASLVMAVVVNEGEEDGGNEAEENSPPHRRKRLWGLVVCHNESPRFVPFPLR 379
Query: 378 ---------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSPSIMDLV 427
F + +N E +L + + EK ++RTQT+LCDMLLR+ P GI+TQ+P+IMDLV
Sbjct: 380 YACEFLMQVFAIHVNKEFELENLVKEKKIMRTQTMLCDMLLREFVPLGIITQTPNIMDLV 439
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAA YQ K + LGVTP+E QI DIV WL H DSTGLSTD+L +AGYP ++LGD
Sbjct: 440 KCDGAAFLYQDKIWRLGVTPSEPQIYDIVHWLSACHMDSTGLSTDNLHEAGYPGISSLGD 499
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
VCGMAVA IT +D LFWFRS A I+WGGAKH DKDDG+RMHPRSSFKAFLEV K
Sbjct: 500 VVCGMAVARITSKDMLFWFRSPAAASIRWGGAKHDAADKDDGRRMHPRSSFKAFLEVAKV 559
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPW + EM+AIHSLQLILRD+ E +KA+++ QL +L+L+G+ E+ V EMVR
Sbjct: 560 RSLPWGDHEMNAIHSLQLILRDTLNGIE---NKAIIDPQLNELKLEGMVEV--VTNEMVR 614
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
LIETAT PI AVD G +NGWN K+A+LTGLS +EA GK L+ +V ++V +L
Sbjct: 615 LIETATVPILAVDADGLINGWNMKIAQLTGLSDDEARGKHLL-TIVEDSSIDVVKRMLLL 673
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMD 727
AL+G E++NV+ +++T G + +VVNAC S+D +N+VG CFV QDVT QK ++D
Sbjct: 674 ALQGIEEQNVQFQVKTSGVRRDDGPLILVVNACVSRDIHSNVVGACFVAQDVTGQKFILD 733
Query: 728 KFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVF 787
KF I+GDYKAIV +P PLIPPIF +DE CSEWN AM KL+GW R +++ KML+GEVF
Sbjct: 734 KFTKIEGDYKAIVQNPCPLIPPIFGTDEFGWCSEWNLAMTKLSGWKRDEVMDKMLLGEVF 793
Query: 788 G---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEG 844
G SCCR+K DAL F I + NAF GQ+TEK PF +R+GK+V LL+ +++V++EG
Sbjct: 794 GINTSCCRMKSQDALVNFSILISNAFSGQETEKSPFSFMNRSGKHVDCLLSVSRKVDVEG 853
Query: 845 QIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEA 904
+ G FCF+ ELQQ+ + +Q+ K R+K LAYI EI+NPLSG+ +T +L
Sbjct: 854 NLTGIFCFVLATGHELQQSQPLVQQETVK---RMKALAYIRNEIRNPLSGIMYTRKMLVG 910
Query: 905 TDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMM 964
T+L E+Q LL T A C Q+ +I++D++LE I + LE E EF L V+ VSQVM+
Sbjct: 911 TNLDEEQSLLLSTGAKCHNQLNRILEDLNLEDIMNSCLELEMNEFNLKDVVLTAVSQVML 970
Query: 965 LLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLK 1024
+ + ++ D+P+ + + VYGD R+QQ+ ADFLL V+YSP ++ + LK
Sbjct: 971 PSEGKGVNVVYDLPDGLLSEYVYGDSLRLQQIXADFLLVCVKYSPDG---AQVEITANLK 1027
Query: 1025 QSSEGQT--IVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEV 1082
+++ G++ ++H E R+ G G+ EL+ +MF S ++EG+ L +CRK+L+LMNG+V
Sbjct: 1028 KNTLGKSLQLIHVEIRITHAGNGVAEELLSEMFGSKEETSEEGMSLMVCRKLLRLMNGDV 1087
Query: 1083 QYIRESERCYFLIIFELPMPRRGSKSI 1109
Y+RE+ + F++ EL + K +
Sbjct: 1088 CYLREANKSVFILSAELACASKQPKDV 1114
>gi|33333476|gb|AAQ11871.1| phytochrome A1 [Stellaria longipes]
Length = 1122
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/1132 (50%), Positives = 764/1132 (67%), Gaps = 53/1132 (4%)
Query: 16 SAAQS-SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTM 74
S AQS S T++ R+ H+A + IAQ DA+ HA FE ES FDYS SVR
Sbjct: 3 SRAQSQSSTNSGRSKHSA-------RIIAQTIQDAKFHAEFE---ESSNEFDYSSSVRGS 52
Query: 75 SHSV-----PEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS 129
+ V ++ S+YL +IQ+G IQPFGC +A+D+ TFRVIA+SENA EML + +
Sbjct: 53 TSGVNQLPKSDKVTSSYLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHA 112
Query: 130 VPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHR 189
VP++ ++ IGTD+RT+FT S+ L+KA G +++LLNPI +H KN+GKPFYAI+HR
Sbjct: 113 VPSVGDLPVIGIGTDIRTIFTGPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHR 172
Query: 190 VDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQL 249
V +VID EP + + ++ AGA+QS KLA +AI++LQSLP G++ L DT+V+ V +L
Sbjct: 173 VTRSLVIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMVRLVDTMVQEVFEL 232
Query: 250 TGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDC 309
TGYDRVM Y+FH+D+HGEVV+E +P+L+ Y GLHYPATDIPQA+RFLF +N+VR+I DC
Sbjct: 233 TGYDRVMAYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDC 292
Query: 310 HATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG 369
A + V+QDE L L L GSTLRAPHGCHAQYM NM SI SL +AV++N D+E G
Sbjct: 293 RAKNVRVVQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGS 352
Query: 370 -----RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVL 398
RLW F + +N EL+L +Q EK +L
Sbjct: 353 APAQPHKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKIL 412
Query: 399 RTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEW 458
RTQTLLCDML+RD+P GIVT SP+IMDLVKCDGAAL Y K + LG TPT+ Q+++I W
Sbjct: 413 RTQTLLCDMLIRDAPLGIVTHSPNIMDLVKCDGAALLYNNKVWRLGSTPTDYQLQEIGGW 472
Query: 459 LLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGG 518
L H DSTGLSTDSL DAGYP A LGD+VCGMA IT D LFWF SHTA EIKWGG
Sbjct: 473 LSRDHMDSTGLSTDSLYDAGYPAALELGDSVCGMAAVSITVNDMLFWFTSHTAAEIKWGG 532
Query: 519 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN 578
AKH +KDDG +MHPRSSFKAFLEVVK RS+PW + EMDAIHSLQLILR++F+D EA++
Sbjct: 533 AKHEAGEKDDGSKMHPRSSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDGEAAD 592
Query: 579 -SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTG 637
+ +V+++++ DL++ G+ EL +V EMVRLIETAT PIFAVD G VNGWN K+ ELTG
Sbjct: 593 LNTSVIHSKISDLQISGLKELEAVTSEMVRLIETATVPIFAVDSDGLVNGWNTKIYELTG 652
Query: 638 LSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVV 697
+ VEEA+GK + LV + V +L AL+GEE KNV+ +++ + + ++V
Sbjct: 653 IPVEEAVGKHIAA-LVEDSSIDNVKQMLQSALQGEEKKNVQFEVKRHHSIPDSGPISLIV 711
Query: 698 NACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENT 757
NAC+SKD N+VGVC + QD+T QK VMDKF+ I+GDYKAI+ SPNPLIPPIF +DE
Sbjct: 712 NACASKDVNGNVVGVCLIAQDITGQKTVMDKFLRIEGDYKAIIQSPNPLIPPIFGTDEFG 771
Query: 758 CCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQD 814
CSEWN AM KLTGW+R ++I KML+GEVFG SCCRLK +A + L+ A GQ+
Sbjct: 772 WCSEWNPAMAKLTGWTREEVIDKMLLGEVFGMHKSCCRLKNQEAFVNLGVLLNGAMSGQN 831
Query: 815 TEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKC 874
EK F R+GKY++ LL NK++N EG + G FCFLQ+AS +LQ AL +QR E+
Sbjct: 832 IEKLSIGFFTRSGKYIECLLCVNKKLNGEGDVTGVFCFLQLASHDLQHALHIQRLAEQAA 891
Query: 875 FARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDL 934
R LAY+ ++IKNPL+G+ F+ +L+ T++ E Q+ +L+TSA C+ Q+ KI+ D DL
Sbjct: 892 TKRANVLAYMKRQIKNPLAGIIFSGKILDGTNVDEKQRLVLQTSARCQGQLNKILDDSDL 951
Query: 935 ESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQ 994
+SI DG E E EF + ++ A +SQVM E+ +Q+ + E +YGD R+Q
Sbjct: 952 DSIIDGYCELEMVEFAVQDILVASISQVMAKSSEKGIQMSNNCTEHGFKETLYGDSLRLQ 1011
Query: 995 QVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDM 1054
Q+LADFL V ++ S G + + VR T + E + + EFR++ G G+ EL+ +M
Sbjct: 1012 QILADFLSISVNFT-SPGGHIGVTVRLTKDKIGESVQLANLEFRIMHTGGGISEELLSEM 1070
Query: 1055 FHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGS 1106
F S +++G+ L + RK++KLMNG++QY+R + F+I EL + S
Sbjct: 1071 FESRGNASEDGISLLISRKLVKLMNGDIQYLRSAGTSTFIISVELAVAGNSS 1122
>gi|218683837|gb|ACL00873.1| phytochrome B [Capparis frondosa]
Length = 652
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/650 (82%), Positives = 573/650 (88%), Gaps = 31/650 (4%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVGIVIDLEPARTED ALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGIVIDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR+LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRELTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHAT + ++QD+ LMQPLCLVGSTLRAPH CHAQYMANMGS+ASLA+AVIING+DEE
Sbjct: 121 IVDCHATTVRLVQDDELMQPLCLVGSTLRAPHECHAQYMANMGSLASLAMAVIINGSDEE 180
Query: 366 AVG---GRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GRS+ RLW AFGLQLNMELQLASQ+SEK
Sbjct: 181 GTNVNSGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQVSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAA YQGKYYP+GVTPTE QIKDIV
Sbjct: 241 VLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAAFLYQGKYYPVGVTPTEAQIKDIV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL YHGDSTGLSTDSLADAGYP AA LGDAVCGM VAYITKRDFLFWFRSHTAKEIKW
Sbjct: 301 EWLLAYHGDSTGLSTDSLADAGYPSAAALGDAVCGMVVAYITKRDFLFWFRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHP+DKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDA+HSLQLILRDS +++EA
Sbjct: 361 GGAKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAVHSLQLILRDSIKESEA 420
Query: 577 SNSKAVVNAQLV--DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+NSKAVV D+ +QG+DELS++AREMVRLIETAT PIFAVDV G +NGWNAK+AE
Sbjct: 421 TNSKAVVQTHQPGGDMAVQGLDELSTIAREMVRLIETATVPIFAVDVDGHINGWNAKIAE 480
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDL+ KEYEE VD L HAL+G EDKNVEIKL+TFG E K+A+F
Sbjct: 481 LTGLSVEEAMGKSLVHDLICKEYEEAVDKFLSHALRGVEDKNVEIKLKTFGPELHKRALF 540
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDKFIHIQGDYKAI+HSP+PLIPPIFA+D
Sbjct: 541 VVVNACSSKDYLDNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIIHSPSPLIPPIFAAD 600
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMI 804
ENTCC EWNTAMEKLTGWSR +IIG+ LVGEVFGSCCRLKGPD LT FMI
Sbjct: 601 ENTCCLEWNTAMEKLTGWSREEIIGRTLVGEVFGSCCRLKGPDTLTNFMI 650
>gi|218683835|gb|ACL00872.1| phytochrome B [Capparis frondosa]
Length = 652
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/652 (82%), Positives = 573/652 (87%), Gaps = 31/652 (4%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVGIVIDLEPARTED ALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC TVVES
Sbjct: 1 ILHRIDVGIVIDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCGTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR+L GYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRELIGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ ++QD+ LMQPLCLVGSTLRAPH CHAQYMANMGS+ASLA+AVIING+DEE
Sbjct: 121 IVDCHATPVRLVQDDELMQPLCLVGSTLRAPHECHAQYMANMGSLASLAMAVIINGSDEE 180
Query: 366 AVG---GRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GRS+ RLW AFGLQLNMELQLASQ+SEK
Sbjct: 181 GTNVNSGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQVSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSP GIVTQSPSIMDLVKCDGAA YQGKYYPLGVTPTE QIKDIV
Sbjct: 241 VLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAAFLYQGKYYPLGVTPTEAQIKDIV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL YHGDSTGL+TDSLADAGYP AA LGDAVCGM VAYITKRDFLFWFRSHTAKEIKW
Sbjct: 301 EWLLAYHGDSTGLTTDSLADAGYPSAAALGDAVCGMVVAYITKRDFLFWFRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHP+DKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDS +++EA
Sbjct: 361 GGAKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSIKESEA 420
Query: 577 SNSKAVVNAQLV--DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+NSKAVV D+ +QG+DELS++AREMVRLIETAT PIFAVDV G +NGWNAK+AE
Sbjct: 421 TNSKAVVQTHQPGGDMAVQGLDELSTIAREMVRLIETATVPIFAVDVDGHINGWNAKIAE 480
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDL+ KEYEE VD L HAL+G EDKNVEIKL+TFG E K+A+F
Sbjct: 481 LTGLSVEEAMGKSLVHDLICKEYEEAVDKFLSHALRGVEDKNVEIKLKTFGPELHKRALF 540
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY +NIVGVCFVGQDVT QK+VMDKFIHIQGDYKAI+HSP+PLIPPIFA+D
Sbjct: 541 VVVNACSSKDYLDNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIIHSPSPLIPPIFAAD 600
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
ENTCC EWNTAMEKLTGWSR +IIG+ LVGEVFGSCCRLKGPD LT FMI L
Sbjct: 601 ENTCCLEWNTAMEKLTGWSREEIIGRTLVGEVFGSCCRLKGPDTLTNFMIVL 652
>gi|108802811|gb|ABG21356.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1054 (51%), Positives = 739/1054 (70%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS SV + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASVNLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L+D LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSDTLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|218192672|gb|EEC75099.1| hypothetical protein OsI_11260 [Oryza sativa Indica Group]
Length = 924
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/668 (77%), Positives = 579/668 (86%), Gaps = 4/668 (0%)
Query: 443 LGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDF 502
L P E QIKDI+EWL HGDSTGLSTDSLADAGY AA LGDAV GMAVAYIT D+
Sbjct: 252 LQALPGEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAAALGDAVSGMAVAYITPSDY 311
Query: 503 LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHS 562
LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHS
Sbjct: 312 LFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHS 371
Query: 563 LQLILRDSFRDAE--ASNSKAVVNAQ--LVDLELQGVDELSSVAREMVRLIETATAPIFA 618
LQLILRDSFRD+ SNSKA+VN Q L +LEL+G+DELSSVAREMVRLIETAT PIFA
Sbjct: 372 LQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELSSVAREMVRLIETATVPIFA 431
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD GC+NGWNAKVAELTGLSVEEAMGKSLV+DL++KE EE V+ LL AL+G+EDKNVE
Sbjct: 432 VDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDKNVE 491
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
IKL+TFG E K +FV+VNACSS+DYT NIVGVCFVGQDVT QK+VMDKFI+IQGDYKA
Sbjct: 492 IKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGDYKA 551
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDA 798
IVH+PNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG+++GK+LVGEVFG+CCRLKGPDA
Sbjct: 552 IVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKGPDA 611
Query: 799 LTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASP 858
LTKFMI LHNA GGQD EKFPF FD+NGKYVQALLTAN R M+G+ +GAFCFLQIASP
Sbjct: 612 LTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQIASP 671
Query: 859 ELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETS 918
ELQQA +QR EKKC+AR+KELAYI QEIKNPL+G+ FTNSLLE TDL +DQ+Q LETS
Sbjct: 672 ELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFLETS 731
Query: 919 AACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIP 978
ACEKQM KI+KD L+SIEDGSL EK EF LGSV+NAVVSQVM+ LRER+LQLIRDIP
Sbjct: 732 TACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIRDIP 791
Query: 979 EEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFR 1038
+EIK + YGDQ RIQQVL DFLL+MVR++P+ GWVEI VRP +KQ+S+G + FR
Sbjct: 792 DEIKEASAYGDQYRIQQVLCDFLLSMVRFAPAENGWVEIQVRPNIKQNSDGTDTMLFLFR 851
Query: 1039 MVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFE 1098
CPGEGLPPE+VQDMF +SRW TQEG+GLS+CRKILKLM GEVQYIRESER +F I+ E
Sbjct: 852 FACPGEGLPPEIVQDMFSNSRWTTQEGIGLSICRKILKLMGGEVQYIRESERSFFHIVLE 911
Query: 1099 LPMPRRGS 1106
LP P++ +
Sbjct: 912 LPQPQQAA 919
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/242 (61%), Positives = 185/242 (76%), Gaps = 21/242 (8%)
Query: 6 QHQQQHRRSQSAAQSSGTSNIRAHHNATESM----------TVSKAIAQYTVDARLHAVF 55
+HQ H +QSSG S RA +VSKA+AQYT+DARLHAVF
Sbjct: 22 RHQHHH------SQSSGGSTSRAGGGGGGGGGGGGGAAAAESVSKAVAQYTLDARLHAVF 75
Query: 56 EQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQPFGCTIAV-DEATFRVIA 114
EQSG SG+SFDY+QS+R EQQI+AYLS+IQRGGHIQPFGCT+AV D+++FR++A
Sbjct: 76 EQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLA 135
Query: 115 YSENAGEMLGLAPQ-SVPNLEKQEI---LTIGTDVRTLFTSSSSVLLEKAFGAREITLLN 170
YSEN ++L L+P SVP+L+ + +++G D R LF SS+VLLE+AF AREI+LLN
Sbjct: 136 YSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVLLERAFAAREISLLN 195
Query: 171 PIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSL 230
P+WIHS+ + KPFYAILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS+LQ+L
Sbjct: 196 PLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQAL 255
Query: 231 PG 232
PG
Sbjct: 256 PG 257
>gi|108802772|gb|ABG21337.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802777|gb|ABG21339.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802779|gb|ABG21340.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802785|gb|ABG21343.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802787|gb|ABG21344.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802789|gb|ABG21345.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802791|gb|ABG21346.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802801|gb|ABG21351.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802813|gb|ABG21357.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802817|gb|ABG21359.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/1054 (51%), Positives = 739/1054 (70%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS SV + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASVNLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802783|gb|ABG21342.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802815|gb|ABG21358.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/1054 (51%), Positives = 739/1054 (70%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802793|gb|ABG21347.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802795|gb|ABG21348.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802799|gb|ABG21350.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802803|gb|ABG21352.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802805|gb|ABG21353.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/1054 (51%), Positives = 737/1054 (69%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S LEKA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YI+++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + ++GDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + EK F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALRGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802807|gb|ABG21354.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/1054 (51%), Positives = 737/1054 (69%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S LEKA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YI+++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + ++GDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + EK F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALRGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVKLEFRIIHPAPGLP 1054
>gi|108802821|gb|ABG21361.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/1054 (51%), Positives = 739/1054 (70%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS SV + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASVNLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPIDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802819|gb|ABG21360.1| PHYTOCHROME C [Arabidopsis lyrata]
Length = 1055
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/1054 (51%), Positives = 740/1054 (70%), Gaps = 46/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR-----TMSHSVPEQQISAY 86
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S Y
Sbjct: 10 STRSRKNSRVSSQVLVDAKLHTNFE---ESERLFDYSASINLNMPSSSSCEIPSSAVSTY 66
Query: 87 LSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVR 146
L KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E L+IGTDV+
Sbjct: 67 LQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLTPHTVPSMEQREALSIGTDVK 126
Query: 147 TLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDP 206
+LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 SLFQSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEV 186
Query: 207 ALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHG 266
++ AGA++S KLA +IS+LQ+LPGG++ LLCD +V+ V +LTGYDRVMVY+FHED HG
Sbjct: 187 PVTAAGALRSYKLAAISISRLQALPGGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHG 246
Query: 267 EVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPL 326
EV+AE R DLEPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 EVIAECCREDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPI 306
Query: 327 CLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 SLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHA 366
Query: 378 -------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVT
Sbjct: 367 SPRFLPFPLRYACEFLTQVFGVQVNKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVT 426
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++G
Sbjct: 427 QSPNIMDLVKCDGAALYYREKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESG 486
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP A+ LG+++CGMA YIT +DFLFWFRS TAK+I+WGGA+H P D+ DG+RMHPRSSF
Sbjct: 487 YPDASVLGESICGMAAVYITDKDFLFWFRSGTAKQIQWGGARHDPNDR-DGKRMHPRSSF 545
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAF+E+V+ +S+PWD+ EMDAI+SLQLI++ S +D +SK VVN VD +Q VDEL
Sbjct: 546 KAFMEIVRWKSMPWDDMEMDAINSLQLIIKGSLQD---EHSKTVVNVPFVDNRVQKVDEL 602
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+ EMVRLI+TA PIFAVD G +NGWN+K AE++GL++E+A+GK V DLV +
Sbjct: 603 CVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVSGLAIEQAIGKP-VSDLVEDDSA 661
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
E V N+L AL+G E++ I++R FG + + + +VVN C S+D TNN++GVCF+GQD
Sbjct: 662 ETVKNMLALALEGSEERGAAIRIRAFGPKRKSSPIELVVNTCCSRDRTNNVLGVCFIGQD 721
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
VT QK +++ + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 VTGQKTLIENYSRVQGDYARIMWSPSTLIPPIFMTNENGLCSEWNNAMQKLSGIKREEVV 781
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+++GEVF S CRLK D LTK I + GQ + EK F + R+G +++ALL
Sbjct: 782 NKLILGEVFTSDDYGCRLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALL 841
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E+ +LAY+ QE+KNP
Sbjct: 842 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQVSEQVIACAFNKLAYLRQEVKNPEQA 901
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I+D D++ IE+G +E + +EF L
Sbjct: 902 ISFLQDLLHSSGLSEDQKKLLRTSVLCREQLAKVIRDSDIDGIEEGYVELDCSEFNLEES 961
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+I D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 962 LEAVVKQVMELSIERKVQIICDYPQEVLSMRLYGDNLRLQQILSETLLSSIRFTPALKGL 1021
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1022 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1055
>gi|108802823|gb|ABG21362.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/1054 (51%), Positives = 738/1054 (70%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSESLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802770|gb|ABG21336.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802775|gb|ABG21338.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/1054 (51%), Positives = 738/1054 (70%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LT YDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802766|gb|ABG21334.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802768|gb|ABG21335.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/1054 (51%), Positives = 739/1054 (70%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC + VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLVVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V++E R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VISECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802797|gb|ABG21349.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/1054 (51%), Positives = 737/1054 (69%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S LEKA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YI+++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + ++GDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALRGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|108802809|gb|ABG21355.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/1054 (51%), Positives = 737/1054 (69%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQPFGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S LEKA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+++N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVKINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YI+++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + ++GDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + EK F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALRGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVKLEFRIIHPAPGLP 1054
>gi|108802781|gb|ABG21341.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/1054 (51%), Positives = 738/1054 (70%), Gaps = 47/1054 (4%)
Query: 32 ATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYL 87
+T S S+ +Q VDA+LH FE ES + FDYS S+ + S +P +S YL
Sbjct: 10 STRSRQNSRVSSQVLVDAKLHGNFE---ESERLFDYSASINLNMPSSSCEIPSSAVSTYL 66
Query: 88 SKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRT 147
KIQRG IQ FGC I VDE +VIA+SEN EMLGL P +VP++E++E LTIGTDV++
Sbjct: 67 QKIQRGMLIQTFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKS 126
Query: 148 LFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPA 207
LF S L+KA EI++LNPI +H +++ KPFYAILHR++ G+VIDLEP ++
Sbjct: 127 LFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVP 186
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA++S KLA ++IS+LQ+LP G++ LLCD +V+ V +LTGYDRVMVY+FHED HGE
Sbjct: 187 VTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGE 246
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
V+AE R D+EPY GLHY ATDIPQASRFLF +N+VRMI DC A P+ V+QD+ L QP+
Sbjct: 247 VIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPIS 306
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLWA-------- 377
L GSTLRAPHGCHAQYM+NMGS+ASL ++V ING+D + + T LW
Sbjct: 307 LSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHAS 366
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+Q+N E + A L EK +L+TQ++LCDML R++P GIVTQ
Sbjct: 367 PRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQ 426
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP+IMDLVKCDGAALYY+ K + LGVTPTETQI+D+++W+L HG +TG +T+SL ++GY
Sbjct: 427 SPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGY 486
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P A+ LG+++CGMA YIT++DFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFK
Sbjct: 487 PDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFK 545
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AF+E+V+ +S+PWD+ EMDAI+SLQLI++ S ++ +SK VV+ LVD +Q VDEL
Sbjct: 546 AFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKVDELC 602
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
+ EMVRLI+TA PIFAVD G +NGWN+K AE+TGL+VE+A+GK V DLV + E
Sbjct: 603 VIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVE 661
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
V N+L AL+G E++ EI++R FG + + V +VVN C S+D TNN++GVCF+GQDV
Sbjct: 662 TVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDV 721
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T QK + + + +QGDY I+ SP+ LIPPIF ++EN CSEWN AM+KL+G R +++
Sbjct: 722 TGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVN 781
Query: 780 KMLVGEVFGS----CCRLKGPDALTKFMIALHNAFGGQ-DTEKFPFPLFDRNGKYVQALL 834
K+L+GEVF + CC LK D LTK I + GQ + +K F + R+G +++ALL
Sbjct: 782 KILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALL 840
Query: 835 TANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSG 894
+ANKR ++EG++ G CFLQ+ SPELQ AL VQ+ E L +LAY+ E+K+P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 895 VSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSV 954
+SF LL ++ L+EDQK+LL TS C +Q+ K+I D D+E IE+G +E + +EF L
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQES 960
Query: 955 INAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGW 1014
+ AVV QVM L ER +Q+ D P+E+ ++ +YGD R+QQ+L++ LL+ +R++P+ +G
Sbjct: 961 LEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWKGL 1020
Query: 1015 -VEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLP 1047
V V ++ + V EFR++ P GLP
Sbjct: 1021 CVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLP 1054
>gi|449458123|ref|XP_004146797.1| PREDICTED: phytochrome A-like [Cucumis sativus]
gi|449527803|ref|XP_004170899.1| PREDICTED: phytochrome A-like [Cucumis sativus]
Length = 1148
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1117 (49%), Positives = 753/1117 (67%), Gaps = 64/1117 (5%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVR---TMSHSVPEQQISAYLSKIQRGGHIQP 98
+ Q ++DA+L + FEQSG S FDYS S+ + + P +AYL +IQ IQP
Sbjct: 31 LTQTSIDAKLQSHFEQSGSS---FDYSTSIHLTNNPTAAPPATTTTAYLQQIQISNLIQP 87
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A+ T ++IA+S+NA EML +VP+ + +L IGTD+R +FT+ ++ L
Sbjct: 88 FGCLLALHPTTLKLIAFSQNAPEMLTTVAHTVPDGDNHPLLAIGTDLRGIFTAPTATALL 147
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
KA ++TLLNPI +HSK++GKPFYAILHRV ++ID EP + + ++ AGA+QS K
Sbjct: 148 KALAFPDVTLLNPILVHSKSSGKPFYAILHRVTGSLIIDFEPLKPDQVPVTAAGALQSYK 207
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
LA +AI++LQ+LP G + LCDT+V+ V +LTGYDRVM Y+FH+D+HGEV +E +P LE
Sbjct: 208 LAAKAITRLQALPSGSLVRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVFSEVTKPGLE 267
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLF +N+VRMIVDC A + VIQD+ L L L GSTLRAPH
Sbjct: 268 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVIQDQNLDFDLTLCGSTLRAPHC 327
Query: 339 CHAQYMANMGSIASLALAVIIN-----------GNDEEAVGGRSTTRLWA---------- 377
CH QYM NM SIASL +A+++N N++ ++ RLW
Sbjct: 328 CHLQYMENMDSIASLVMAIVVNEEEEEENFDQSNNNDASLQKHKRKRLWGLVVCHNTTPR 387
Query: 378 ----------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSP 421
F + +N EL+L +Q+ EK++LRTQTLLCDML+RD+P GIV+++P
Sbjct: 388 FVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLLCDMLMRDAPLGIVSRTP 447
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVK DGAAL Y K + LG+TPT+ ++DI W+L YH DSTGLSTDSL DAGYP
Sbjct: 448 NIMDLVKSDGAALLYNNKVWRLGITPTDFHLQDIASWILEYHMDSTGLSTDSLYDAGYPG 507
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
A LGD VCGMA I+ D +FWFRSHTA EI+WGGAKH P +KDDG++MHPRSSFKAF
Sbjct: 508 ALALGDVVCGMAAVRISSNDMIFWFRSHTASEIRWGGAKHEPGEKDDGRKMHPRSSFKAF 567
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNS---KAVVNAQLVDLE-LQGVDE 597
LEVVK+RSLPW + EMDAIHSLQLILR++F+D + S + + L DL+ L G E
Sbjct: 568 LEVVKTRSLPWKDFEMDAIHSLQLILRNTFKDRDDHMSEIHRKSIQTTLSDLKILDGRQE 627
Query: 598 LSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEY 657
L SV EMVRLIETAT PI AVDV G VNGWN+K+AELTGLSV++A+GK+L+ LV
Sbjct: 628 LESVTSEMVRLIETATVPILAVDVDGLVNGWNSKIAELTGLSVDKAIGKNLL-TLVKDSS 686
Query: 658 EEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQ 717
EIV +L AL+G+E+KNV+ +++T + ++ ++VNAC+SKD + N+VGVCFV Q
Sbjct: 687 VEIVKKMLVLALQGQEEKNVQFEIKTHNVDINSGSISLIVNACASKDLSENVVGVCFVAQ 746
Query: 718 DVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDI 777
D+T QK+VMDKF +QGDYKAIV +PNPLIPPIF DE C+EWN AM KL+GWSR +
Sbjct: 747 DITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCTEWNLAMTKLSGWSRESV 806
Query: 778 IGKMLVGEVFGS--------CCRLKGPDALTKFMIALHNAFGGQDTEK-FPFPLFDRNGK 828
+ KML+GEVFG+ CC+LK +A I L+NA GQD EK F + RNG
Sbjct: 807 VNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDPEKNISFGFYGRNGM 866
Query: 829 YVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEI 888
+V+ LL NK ++ +G ++G FCFLQ+AS ELQQAL++Q+ E+ RLK L Y+ ++I
Sbjct: 867 FVECLLCVNKILDRDGAVIGVFCFLQLASQELQQALSIQKLCERTASNRLKALGYMKRQI 926
Query: 889 KNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDV-DLESIEDGSLEFEKA 947
+NPL G+ F+ +L+ T L +QKQLL S C++Q+ K++ + DL+ I G +E E
Sbjct: 927 QNPLCGIIFSRKMLQQTQLGVEQKQLLINSVNCQRQISKVLDESHDLDHIIQGVIELEMV 986
Query: 948 EFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRY 1007
EF L V+ +SQVMM + + +Q+ ++ EEI +YGD R+QQ++ADFLL V Y
Sbjct: 987 EFSLYEVLVVAISQVMMKSKGKGIQIENEVGEEIMCETLYGDNLRVQQIMADFLLISVHY 1046
Query: 1008 SPSAEGWVEIHVRPTLKQSSEGQT-IVHNEFRMVCPGEGLPPELVQDMFHSSRW----MT 1062
+P+ G + + T K ++H EFR+ G G+P L+ +MF + +
Sbjct: 1047 APTG-GQLMLSTTFTNKDHFRNSLHLLHLEFRITYVGGGIPESLLNEMFGNDNMDHEDSS 1105
Query: 1063 QEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+EG L + RK++K+MNG+V+Y+RE+ + F+I +L
Sbjct: 1106 EEGYSLFISRKLVKMMNGDVRYVREAAKSTFIITLQL 1142
>gi|39777243|gb|AAR30891.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1107 (50%), Positives = 746/1107 (67%), Gaps = 52/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRG 93
++ +AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG
Sbjct: 22 ARILAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRG 78
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT
Sbjct: 79 KLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPG 138
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAG 212
+ L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AG
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAG 197
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEI 257
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P +EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GST
Sbjct: 258 TKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGST 317
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA-------- 377
LRAPH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 318 LRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHES 377
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVT 418
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVS 437
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
SP+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAG
Sbjct: 438 GSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAG 497
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SF
Sbjct: 498 YPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSF 557
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL
Sbjct: 558 KAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAEL 617
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+V EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV
Sbjct: 618 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSV 676
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
IV +L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD
Sbjct: 677 SIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
+T KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I
Sbjct: 737 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVI 796
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLT 835
KML+GEVF S C LK D + I +++A G++ EK PF LFDRNGKY++ LL+
Sbjct: 797 DKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLS 856
Query: 836 ANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGV 895
N++VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+
Sbjct: 857 VNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGM 916
Query: 896 SFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGS 953
++ L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L
Sbjct: 917 LYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLED 976
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
V+ + VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G
Sbjct: 977 VVVSAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-G 1035
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCR 1072
V+I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R
Sbjct: 1036 SVDISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSR 1095
Query: 1073 KILKLMNGEVQYIRESERCYFLIIFEL 1099
+L+LMNG +++IRE+ F++ EL
Sbjct: 1096 NLLRLMNGNIRHIREAGMSTFILTAEL 1122
>gi|218683839|gb|ACL00874.1| phytochrome B [Peritoma arborea]
Length = 652
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/652 (80%), Positives = 565/652 (86%), Gaps = 31/652 (4%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHA P+ VIQDE L QPLCLVGSTLRAPHGCHAQYMANMG++ASLA+AVIING++E+
Sbjct: 121 IVDCHAMPIHVIQDERLTQPLCLVGSTLRAPHGCHAQYMANMGTMASLAMAVIINGSEED 180
Query: 366 A---VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GGR++ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GSNVTGGRNSMRLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSP+GIV QSPSIMDLVKCDGAA Y GKYYPLGV P+E QIKDIV
Sbjct: 241 VLRTQTLLCDMLLRDSPSGIVMQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEAQIKDIV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL HGDSTGLSTDSL DAGYP AATLGDAVCGMAVAYIT++DF+FWFRSHTAKEIKW
Sbjct: 301 EWLLANHGDSTGLSTDSLGDAGYPGAATLGDAVCGMAVAYITRKDFIFWFRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDD QRMHPRSSFKAFLEVVKSRSLPW+NAEMD IHSLQLILRDS +++EA
Sbjct: 361 GGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRSLPWENAEMDVIHSLQLILRDSLKESEA 420
Query: 577 SNSKAVVNAQLV--DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
N+KA V A +QG+DELS+VAREMVRLIETAT PIFAVDV G +NGWNAK+AE
Sbjct: 421 INAKAAVRADQPGGSNAVQGLDELSAVAREMVRLIETATVPIFAVDVDGHINGWNAKIAE 480
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLVHDL+YKEYEE LL ALKG+E KNVEIKL+TF E KAVF
Sbjct: 481 LTGLSVEEAMGKSLVHDLIYKEYEEPTAKLLSCALKGDEGKNVEIKLKTFSQELEGKAVF 540
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
V+VNACSSKDY NNIVGVCFVGQDVT QK+VMDKFIHIQGDYKAIVHSP+PLIPPIFA+D
Sbjct: 541 VIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIVHSPSPLIPPIFAAD 600
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
ENTCC EWNTAME L+GWSR ++IGKMLVGEVFGSCCRLKGPDALTK MI L
Sbjct: 601 ENTCCLEWNTAMENLSGWSRSEVIGKMLVGEVFGSCCRLKGPDALTKLMIVL 652
>gi|39777251|gb|AAR30895.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1104 (50%), Positives = 745/1104 (67%), Gaps = 52/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRGGHI 96
+AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG I
Sbjct: 25 LAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT +
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQ 215
L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AGA+Q
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAGALQ 200
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA----------- 377
PH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSP 421
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAGYP
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL +V
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV IV
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSVSIV 679
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I KM
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVF S C LK D + I +++A G++ EK PF LFDRNGKY++ LL+ N+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNR 859
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+ ++
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVIN 956
L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L V+
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
+ VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G V+
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-GSVD 1038
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCRKIL 1075
I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R +L
Sbjct: 1039 ISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLL 1098
Query: 1076 KLMNGEVQYIRESERCYFLIIFEL 1099
+LMNG++++IRE+ F++ EL
Sbjct: 1099 RLMNGDIRHIREAGMSTFILTAEL 1122
>gi|39777239|gb|AAR30889.1| phytochrome A [Sorghum bicolor]
gi|39777245|gb|AAR30892.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1107 (49%), Positives = 746/1107 (67%), Gaps = 52/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRG 93
++ +AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG
Sbjct: 22 ARILAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRG 78
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT
Sbjct: 79 KLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPG 138
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAG 212
+ L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AG
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAG 197
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEI 257
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P +EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GST
Sbjct: 258 TKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGST 317
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA-------- 377
LRAPH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 318 LRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHES 377
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVT 418
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVS 437
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
SP+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAG
Sbjct: 438 GSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAG 497
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SF
Sbjct: 498 YPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSF 557
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL
Sbjct: 558 KAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAEL 617
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+V EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV
Sbjct: 618 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSV 676
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
IV +L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD
Sbjct: 677 SIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
+T KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I
Sbjct: 737 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVI 796
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLT 835
KML+GEVF S C LK D + I +++A G++ EK PF LFDRNGKY++ LL+
Sbjct: 797 DKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLS 856
Query: 836 ANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGV 895
N++VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+
Sbjct: 857 VNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGM 916
Query: 896 SFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGS 953
++ L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L
Sbjct: 917 LYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLED 976
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
V+ + VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G
Sbjct: 977 VVVSAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-G 1035
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCR 1072
V+I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R
Sbjct: 1036 SVDISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSR 1095
Query: 1073 KILKLMNGEVQYIRESERCYFLIIFEL 1099
+L+LMNG ++++RE+ F++ EL
Sbjct: 1096 NLLRLMNGNIRHLREAGMSTFILTAEL 1122
>gi|356572880|ref|XP_003554593.1| PREDICTED: phytochrome type A-like [Glycine max]
gi|227452663|dbj|BAH57342.1| phytochrome A [Glycine max]
gi|227452667|dbj|BAH57344.1| phytochrome A [Glycine max]
Length = 1130
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/1103 (49%), Positives = 760/1103 (68%), Gaps = 46/1103 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKS-----FDYSQSVRTMSHSVPEQQISAYLSKIQRG 93
++ +AQ T+DA+LHA FE+SG S + +V ++ S+YL + Q+
Sbjct: 24 ARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQTQKI 83
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQPFGC +A+DE T +VIAYSENA EML + +VP++ L IGTD+RT+FT+ S
Sbjct: 84 KLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIFTAPS 143
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGA 213
S ++KA +++L NPI +H K +GKPFYAI+HRV ++ID EP + + ++ +GA
Sbjct: 144 SAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMTASGA 203
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
+QS KLA +AI++L+SL G+++ LC+T+V V +LTGYDRVM Y+FHED+HGEV+AE K
Sbjct: 204 LQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVIAEVK 263
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
RP LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC A + V+QD+ + L L GSTL
Sbjct: 264 RPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLCGSTL 323
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGNDE-----EAVGGRSTTRLWA----------- 377
RA H CH QYM NM S ASL +AV++N NDE +AV + + RLW
Sbjct: 324 RAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHTTPRF 383
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
F + ++ EL++ Q+ EK++L+TQTLLCDML++ P GIV+QSP+
Sbjct: 384 VPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVSQSPN 443
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAAL Y+ K + LGVTP+E+QIK+I WL H DSTG TDSL+DAG+P A
Sbjct: 444 IMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAGFPGA 503
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
A LGD CGMA A I +D LFWFRSHTA EI+WGGAKH P ++DDG+R+HPRSSFKAFL
Sbjct: 504 AALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSFKAFL 563
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSV 601
EVVK+RSLPW E DAIHSLQLILRD+F++ ++ S ++ +L DL+++G+ EL +V
Sbjct: 564 EVVKTRSLPWKTYETDAIHSLQLILRDAFKETQSMEISTYAIDTRLGDLKIEGMQELDAV 623
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
E+VRLIETAT PI AVDV+G +NGWN K+AELTGL V+EA+GK L+ LV + V
Sbjct: 624 TSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLL-TLVEDFSVDRV 682
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L AL+GEE++NV+ +++T + + +VVNAC+S+D +N+VGVCF+ QD+T
Sbjct: 683 KKMLDMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCFLAQDITA 742
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
QK +MDKF I+GDYKAIV +PNPLIPPIF +DE C EWN+AM KLTGW R +++ KM
Sbjct: 743 QKTMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKREEVMDKM 802
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVFG+ CCRL+ +A+ F I L+ A G +TEK PF F R+GK+V+ +L+ K
Sbjct: 803 LLGEVFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVECILSMTK 862
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+++ EG + G FCFLQ+AS ELQQAL +QR E+ RLK+L Y+ ++I+NPL G+ F+
Sbjct: 863 KLDAEGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNPLYGIMFS 922
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
LLE T+L +QKQ L+T C++Q+ KI+ D DL+SI DG ++ E EF L V+ A
Sbjct: 923 RKLLEGTELGAEQKQFLQTGIRCQRQISKILDDSDLDSIIDGYMDLEMVEFTLHEVLVAS 982
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
+SQVM + ++++ D+ E+I T +YGD R+QQVLADFLL + ++P+ ++
Sbjct: 983 LSQVMTKSNAKGIRVVNDVEEKITTETLYGDSIRLQQVLADFLLISINFTPTGG---QVV 1039
Query: 1019 VRPTLKQSSEGQTI--VHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILK 1076
V TL Q G+ + + EF + G+P L+ MF ++EG+ + + RK+LK
Sbjct: 1040 VAATLTQQQLGKLVHLANLEFSITHDSFGVPETLLNQMFGRDGHESEEGISMLISRKLLK 1099
Query: 1077 LMNGEVQYIRESERCYFLIIFEL 1099
LMNG+V+Y+RE+ + F++ EL
Sbjct: 1100 LMNGDVRYLREAGKSSFILSVEL 1122
>gi|39777229|gb|AAR30884.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1107 (50%), Positives = 746/1107 (67%), Gaps = 52/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRG 93
++ +AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG
Sbjct: 22 ARILAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRG 78
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT
Sbjct: 79 KLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPG 138
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAG 212
+ L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AG
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAG 197
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEI 257
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P +EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GST
Sbjct: 258 TKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGST 317
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA-------- 377
LRAPH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 318 LRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHES 377
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVT 418
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVS 437
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
SP+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAG
Sbjct: 438 GSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAG 497
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SF
Sbjct: 498 YPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSF 557
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL
Sbjct: 558 KAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAEL 617
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+V EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV
Sbjct: 618 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSV 676
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
IV +L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD
Sbjct: 677 SIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
+T KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I
Sbjct: 737 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVI 796
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLT 835
KML+GEVF S C LK D + I +++A G++ EK PF LFDRNGKY++ LL+
Sbjct: 797 DKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLS 856
Query: 836 ANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGV 895
N++VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+
Sbjct: 857 VNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGM 916
Query: 896 SFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGS 953
++ L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L
Sbjct: 917 LYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLED 976
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
V+ + VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G
Sbjct: 977 VVVSAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-G 1035
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCR 1072
V+I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R
Sbjct: 1036 SVDISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEPSEEGLSLLVSR 1095
Query: 1073 KILKLMNGEVQYIRESERCYFLIIFEL 1099
+L+LMNG +++IRE+ F++ EL
Sbjct: 1096 NLLRLMNGNIRHIREAGMSTFILTAEL 1122
>gi|39777247|gb|AAR30893.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777249|gb|AAR30894.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777257|gb|AAR30898.1| phytochrome A [Sorghum bicolor subsp. x drummondii]
Length = 1131
Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1104 (50%), Positives = 745/1104 (67%), Gaps = 52/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRGGHI 96
+AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG I
Sbjct: 25 LAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT +
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQ 215
L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AGA+Q
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAGALQ 200
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA----------- 377
PH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSP 421
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAGYP
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL +V
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV IV
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSVSIV 679
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I KM
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVF S C LK D + I +++A G++ EK PF LFDRNGKY++ LL+ N+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNR 859
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+ ++
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVIN 956
L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L V+
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
+ VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G V+
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-GSVD 1038
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCRKIL 1075
I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R +L
Sbjct: 1039 ISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLL 1098
Query: 1076 KLMNGEVQYIRESERCYFLIIFEL 1099
+LMNG+++++RE+ F++ EL
Sbjct: 1099 RLMNGDIRHLREAGMSTFILTAEL 1122
>gi|39777241|gb|AAR30890.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1104 (50%), Positives = 744/1104 (67%), Gaps = 52/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRGGHI 96
+AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG I
Sbjct: 25 LAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT +
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQ 215
L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AGA+Q
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAGALQ 200
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA----------- 377
PH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSP 421
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAGYP
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL +V
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV IV
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSVSIV 679
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I KM
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVF S C LK D + I +++A G++ EK PF LFDRNGKY++ LL+ N+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNR 859
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+ ++
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVIN 956
L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L V+
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
+ VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G V+
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-GSVD 1038
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCRKIL 1075
I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R +L
Sbjct: 1039 ISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLL 1098
Query: 1076 KLMNGEVQYIRESERCYFLIIFEL 1099
+LMNG +++IRE+ F++ EL
Sbjct: 1099 RLMNGNIRHIREAGMSTFILTAEL 1122
>gi|227452665|dbj|BAH57343.1| phytochrome A [Glycine max]
Length = 1130
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/1101 (49%), Positives = 759/1101 (68%), Gaps = 42/1101 (3%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKS-----FDYSQSVRTMSHSVPEQQISAYLSKIQRG 93
++ +AQ T+DA+LHA FE+SG S + +V ++ S+YL + Q+
Sbjct: 24 ARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQTQKI 83
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQPFGC +A+DE T +VIAYSENA EML + +VP++ L IGTD+RT+FT+ S
Sbjct: 84 KLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIFTAPS 143
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGA 213
S ++KA +++L NPI +H K +GKPFYAI+HRV ++ID EP + + ++ +GA
Sbjct: 144 SAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMTASGA 203
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
+QS KLA +AI++L+SL G+++ LC+T+V V +LTGYDRVM Y+FHED+HGEV+AE K
Sbjct: 204 LQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVIAEVK 263
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
RP LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC A + V+QD+ + L L GSTL
Sbjct: 264 RPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLCGSTL 323
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGNDE-----EAVGGRSTTRLWA----------- 377
RA H CH QYM NM S ASL +AV++N NDE +AV + + RLW
Sbjct: 324 RAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHTTPRF 383
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
F + ++ EL++ Q+ EK++L+TQTLLCDML++ P GIV+QSP+
Sbjct: 384 VPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVSQSPN 443
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAAL Y+ K + LGVTP+E+QIK+I WL H DSTG TDSL+DAG+P A
Sbjct: 444 IMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAGFPGA 503
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
A LGD CGMA A I +D LFWFRSHTA EI+WGGAKH P ++DDG+R+HPRSSFKAFL
Sbjct: 504 AALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSFKAFL 563
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSV 601
EVVK+RSLPW E DAIHSLQLILRD+F++ ++ S ++ +L DL+++G+ EL +V
Sbjct: 564 EVVKTRSLPWKTYETDAIHSLQLILRDAFKETQSMEISTYAIDTRLGDLKIEGMQELDAV 623
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
E+VRLIETAT PI AVDV+G +NGWN K+AELTGL V+EA+GK L+ LV + V
Sbjct: 624 TSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLL-TLVEDFSVDRV 682
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L AL+GEE++NV+ +++T + + +VVNAC+S+D +N+VGVCF+ QD+T
Sbjct: 683 KKMLDMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCFLAQDITA 742
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
QK +MDKF I+GDYKAIV +PNPLIPPIF +DE C EWN+AM KLTGW R +++ KM
Sbjct: 743 QKTMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKREEVMDKM 802
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVFG+ CCRL+ +A+ F I L+ A G +TEK PF F R+GK+V+ +L+ K
Sbjct: 803 LLGEVFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVECILSMTK 862
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+++ EG + G FCFLQ+AS ELQQAL +QR E+ RLK+L Y+ ++I+NPL G+ F+
Sbjct: 863 KLDAEGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNPLYGIMFS 922
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
LLE T+L +QKQ L+T C++Q+ KI+ D DL+SI DG ++ E EF L V+ A
Sbjct: 923 RKLLEGTELGAEQKQFLQTGIRCQRQISKILDDSDLDSIIDGYMDLEMVEFTLHEVLVAS 982
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
+SQVM + ++++ D+ E+I T +YGD R+QQVLADFLL + ++P+ G V +
Sbjct: 983 LSQVMTKSNAKGIRVVNDVEEKITTETLYGDSIRLQQVLADFLLISINFTPTG-GQVVVA 1041
Query: 1019 VRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLM 1078
T +Q + + + EF + G+P L+ MF ++EG+ + + RK+LKLM
Sbjct: 1042 ATLTQQQLRKLVHLANLEFSITHDSFGVPETLLNQMFGRDGHESEEGISMLISRKLLKLM 1101
Query: 1079 NGEVQYIRESERCYFLIIFEL 1099
NG+V+Y+RE+ + F++ EL
Sbjct: 1102 NGDVRYLREAGKSSFILSVEL 1122
>gi|39777237|gb|AAR30888.1| phytochrome A [Sorghum bicolor]
gi|39777253|gb|AAR30896.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777255|gb|AAR30897.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1104 (50%), Positives = 744/1104 (67%), Gaps = 52/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRGGHI 96
+AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG I
Sbjct: 25 LAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT +
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQ 215
L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AGA+Q
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAGALQ 200
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA----------- 377
PH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSP 421
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAGYP
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL +V
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV IV
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSVSIV 679
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I KM
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVF S C LK D + I +++A G++ EK PF LFDRNGKY++ LL+ N+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNR 859
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+ ++
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVIN 956
L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L V+
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
+ VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G V+
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-GSVD 1038
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCRKIL 1075
I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R +L
Sbjct: 1039 ISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLL 1098
Query: 1076 KLMNGEVQYIRESERCYFLIIFEL 1099
+LMNG ++++RE+ F++ EL
Sbjct: 1099 RLMNGNIRHLREAGMSTFILTAEL 1122
>gi|242033161|ref|XP_002463975.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
gi|241917829|gb|EER90973.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
Length = 1131
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/1107 (49%), Positives = 745/1107 (67%), Gaps = 52/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRG 93
++ +AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG
Sbjct: 22 ARILAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRG 78
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT
Sbjct: 79 KLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPG 138
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAG 212
+ L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AG
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAG 197
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEI 257
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P +EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GST
Sbjct: 258 TKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGST 317
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA-------- 377
LRAPH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 318 LRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHES 377
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVT 418
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVS 437
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
SP+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAG
Sbjct: 438 GSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAG 497
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SF
Sbjct: 498 YPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSF 557
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL
Sbjct: 558 KAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAEL 617
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+V EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV
Sbjct: 618 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSV 676
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
IV +L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD
Sbjct: 677 SIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
+T KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I
Sbjct: 737 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVI 796
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLT 835
KML+GEVF S C LK D + I +++A G++ E PF LFDRNGKY++ LL+
Sbjct: 797 DKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLS 856
Query: 836 ANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGV 895
N++VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+
Sbjct: 857 VNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGM 916
Query: 896 SFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGS 953
++ L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L
Sbjct: 917 LYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLED 976
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
V+ + VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G
Sbjct: 977 VVVSAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-G 1035
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCR 1072
V+I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R
Sbjct: 1036 SVDISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSR 1095
Query: 1073 KILKLMNGEVQYIRESERCYFLIIFEL 1099
+L+LMNG ++++RE+ F++ EL
Sbjct: 1096 NLLRLMNGNIRHLREAGMSTFILTAEL 1122
>gi|218683875|gb|ACL00892.1| phytochrome B [Pachycladon exile]
Length = 654
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/654 (80%), Positives = 567/654 (86%), Gaps = 33/654 (5%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+E+
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 366 A---VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GRS+ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GSNVATGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QIKD+V
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT KEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTGKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 577 S-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+ NSK V A +++ QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+
Sbjct: 421 AKNSKTVDGAVQPYMDMVGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKI 480
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+EDKNVE+KL+TF E + KA
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKA 540
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
VFVVVNACSSKDY NNIVGVCFVGQDVT QK++MDKFI+IQGDYKAIVHSPNPLIPPIFA
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDVTGQKILMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
+DENTCC EWNTAMEKL GWSR ++IGKMLVGEVFG+CCRLKGPDALTKFMI L
Sbjct: 601 ADENTCCLEWNTAMEKLMGWSRSEVIGKMLVGEVFGNCCRLKGPDALTKFMIVL 654
>gi|39777235|gb|AAR30887.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1104 (50%), Positives = 744/1104 (67%), Gaps = 52/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRGGHI 96
+AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG I
Sbjct: 25 LAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT +
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQ 215
L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AGA+Q
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAGALQ 200
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA----------- 377
PH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSP 421
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAGYP
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL +V
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV IV
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSVSIV 679
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I KM
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVF S C LK D + I +++A G++ EK PF LFDRNGKY++ LL+ N+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNR 859
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+ ++
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVIN 956
L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L V+
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
+ VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G V+
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-GSVD 1038
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCRKIL 1075
I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R +L
Sbjct: 1039 ISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEPSEEGLSLLVSRNLL 1098
Query: 1076 KLMNGEVQYIRESERCYFLIIFEL 1099
+LMNG ++++RE+ F++ EL
Sbjct: 1099 RLMNGNIRHLREAGMSTFILTAEL 1122
>gi|11134026|sp|P93526.1|PHYA_SORBI RecName: Full=Phytochrome a
gi|1800215|gb|AAB41397.1| phytochrome A [Sorghum bicolor]
gi|39777227|gb|AAR30883.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1107 (49%), Positives = 745/1107 (67%), Gaps = 52/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRG 93
++ +AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG
Sbjct: 22 ARILAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRG 78
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT
Sbjct: 79 KLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPG 138
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAG 212
+ L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AG
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAG 197
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEI 257
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P +EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GST
Sbjct: 258 TKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGST 317
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA-------- 377
LRAPH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 318 LRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHES 377
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVT 418
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVS 437
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
SP+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAG
Sbjct: 438 GSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAG 497
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SF
Sbjct: 498 YPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSF 557
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL
Sbjct: 558 KAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAEL 617
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+V EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV
Sbjct: 618 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSV 676
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
IV +L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD
Sbjct: 677 SIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
+T KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I
Sbjct: 737 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVI 796
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLT 835
KML+GEVF S C LK D + I +++A G++ E PF LFDRNGKY++ LL+
Sbjct: 797 DKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLS 856
Query: 836 ANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGV 895
N++VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+
Sbjct: 857 VNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGM 916
Query: 896 SFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGS 953
++ L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L
Sbjct: 917 LYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLED 976
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
V+ + VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G
Sbjct: 977 VVVSAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-G 1035
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCR 1072
V+I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R
Sbjct: 1036 SVDISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEPSEEGLSLLVSR 1095
Query: 1073 KILKLMNGEVQYIRESERCYFLIIFEL 1099
+L+LMNG +++IRE+ F++ EL
Sbjct: 1096 NLLRLMNGNIRHIREAGMSTFILTAEL 1122
>gi|218683851|gb|ACL00880.1| phytochrome B [Barbarea vulgaris]
Length = 654
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/654 (80%), Positives = 571/654 (87%), Gaps = 33/654 (5%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+EE
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEE 180
Query: 366 AV---GGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GGRS+ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GNNVGGGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIM+LVKCDGAA Y GKYYPLGV PTE QIKDIV
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMNLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 577 S-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+ NSK+V A ++ QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+
Sbjct: 421 AMNSKSVDGAVQPCRDMSGEQGLDELGAVAREMVRLIETATVPIFAVDTGGCINGWNAKI 480
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+E+KNVE+KL+TF E ++KA
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPELQEKA 540
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
+F+VVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPN LIPPIFA
Sbjct: 541 IFMVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNLLIPPIFA 600
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
+DENTCC EWNTAMEKLTGWSRG++IGKMLVGEVFG+CCRLKGPDALT+FMI L
Sbjct: 601 ADENTCCLEWNTAMEKLTGWSRGEMIGKMLVGEVFGNCCRLKGPDALTRFMIVL 654
>gi|39777231|gb|AAR30885.1| phytochrome A [Sorghum bicolor]
gi|39777233|gb|AAR30886.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/1107 (49%), Positives = 745/1107 (67%), Gaps = 52/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRG 93
++ +AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG
Sbjct: 22 ARILAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRG 78
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT
Sbjct: 79 KLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPG 138
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAG 212
+ L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AG
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAG 197
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEI 257
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P +EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GST
Sbjct: 258 TKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGST 317
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA-------- 377
LRAPH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 318 LRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHES 377
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVT 418
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVS 437
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
SP+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAG
Sbjct: 438 GSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAG 497
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SF
Sbjct: 498 YPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSF 557
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL
Sbjct: 558 KAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAEL 617
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+V EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV
Sbjct: 618 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSV 676
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
IV +L+ AL+G+E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD
Sbjct: 677 SIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
+T KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I
Sbjct: 737 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVI 796
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLT 835
KML+GEVF S C LK D + I +++A G++ E PF LFDRNGKY++ LL+
Sbjct: 797 DKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLS 856
Query: 836 ANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGV 895
N++VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+
Sbjct: 857 VNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGM 916
Query: 896 SFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGS 953
++ L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L
Sbjct: 917 LYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLED 976
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
V+ + VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G
Sbjct: 977 VVVSAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-G 1035
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCR 1072
V+I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R
Sbjct: 1036 SVDISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEPSEEGLSLLVSR 1095
Query: 1073 KILKLMNGEVQYIRESERCYFLIIFEL 1099
+L+LMNG ++++RE+ F++ EL
Sbjct: 1096 NLLRLMNGNIRHLREAGMSTFILTAEL 1122
>gi|33333480|gb|AAQ11873.1| phytochrome C [Stellaria longipes]
Length = 1114
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/1101 (48%), Positives = 734/1101 (66%), Gaps = 42/1101 (3%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR----TMSHSVPEQQISAYLSKIQRGG 94
+ + Q VDA+L + FEQS + F+Y+ SV S VP + +YL K+QRGG
Sbjct: 17 AHVVIQTPVDAQLASDFEQSE---RVFNYTSSVDLNLLASSSDVPSSTVKSYLQKVQRGG 73
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQ FGC IA+DE F+VIAYSENA EML L P +VPN+E+ E LT GTDV TLFTSS
Sbjct: 74 LIQSFGCLIAIDEKNFKVIAYSENAPEMLDLTPHTVPNIEQLEALTFGTDVATLFTSSGV 133
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
L+KA E+ LLNPI +HSKN+GKPFYAILHR+ VG+V+DLE + + ++GA+
Sbjct: 134 SALQKAVNYSELNLLNPILVHSKNSGKPFYAILHRIKVGLVLDLETVNLAETLVGVSGAL 193
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
S KLA +AIS+LQSLP +I LLCD +V+ VR+LTGYDRVMVY+FH+D+HGEV+ ES
Sbjct: 194 MSYKLAAKAISKLQSLPSQNIPLLCDVLVKEVRELTGYDRVMVYKFHDDQHGEVIGESHS 253
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
P L+ Y GLHYPATDIPQASRFLF +N+VRMI DC + + VIQDE L QPL L GSTLR
Sbjct: 254 PSLDSYLGLHYPATDIPQASRFLFLKNKVRMICDCRSPSVKVIQDEALTQPLSLGGSTLR 313
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLWA----------------- 377
APHGCHAQYMANMGSIASL +AV IN ++E T +LW
Sbjct: 314 APHGCHAQYMANMGSIASLVMAVTINNEEDEVSDRHRTRKLWGLVVCHHTSSRFVPYPLR 373
Query: 378 ---------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
FG+ +N E++LA+Q+ EKH+L+ Q++LCDML+RDSP I+TQSP++MDLVK
Sbjct: 374 YACEFLVQVFGIHINKEVELAAQVREKHILKIQSMLCDMLMRDSPITIITQSPNVMDLVK 433
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL YQ K + LG+TP QIKDI +WL YHG++ GL TDSL +AGYP A LGDA
Sbjct: 434 CDGAALLYQSKLWVLGITPKSNQIKDISQWLFEYHGNTKGLITDSLKEAGYPGALELGDA 493
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA I+ + LFWFRSHTAKEIKWGGAKH P D+ MHPRSSF AFL+VVK R
Sbjct: 494 VCGMAAVRISSEEMLFWFRSHTAKEIKWGGAKHEPGQNDERGIMHPRSSFNAFLDVVKWR 553
Query: 549 SLPWDNAEMDAIHSLQLI-LRDSFRDAEASNSKAVV---NAQLVDLELQGVDELSSVARE 604
S+PW++ EMD+I+SLQLI ++ ++ S++ ++ V L ++ + E
Sbjct: 554 SVPWEDMEMDSIYSLQLIFIKCLVKNKTMSDTSKMIVNVPGVGVGGPLSSALKVEPLTGE 613
Query: 605 MVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNL 664
++RLIETA PIF+VDV G +NGWN KVAELTG+ +E+ +G LV D+V + E++ N+
Sbjct: 614 VIRLIETAAVPIFSVDVTGAINGWNFKVAELTGVPMEQVIGSQLV-DVVVEGTVEVLKNI 672
Query: 665 LHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKL 724
L AL+G E+KNVEI+LRT G+ + V +VVNAC S+D N+ G+CFVGQDVT++K
Sbjct: 673 LSSALQGTEEKNVEIRLRTLGSHGKTSYVVLVVNACCSRDVDENVTGICFVGQDVTEEKR 732
Query: 725 VMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVG 784
++D+ +QGDY I+ +P LIPPIF D+ EWN AM K++G S+ +G+ML+G
Sbjct: 733 IVDQITELQGDYSGIMRNPCHLIPPIFLIDDQGVGLEWNDAMAKISGLSKEYTVGRMLIG 792
Query: 785 EVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVN 841
EVF C++K + L + I L G++++K F FD K + ALL A R N
Sbjct: 793 EVFTNGNDGCQVKDYETLLRLKIFLSKMIDGEESDKVLFGFFDHRKKCIDALLCATPRFN 852
Query: 842 MEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSL 901
+ I G CFL + SPELQ ++ +Q+ EK + LK+L Y +++++P+ G++FT +L
Sbjct: 853 ADRNITGVLCFLHLPSPELQYSIHMQKVSEKAATSTLKKLTYFREQVRSPIKGMAFTRNL 912
Query: 902 LEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQ 961
LE+++L +QKQ+L T + CE Q++KII+D D+ SIE+G LE +F L ++AVVSQ
Sbjct: 913 LESSELNIEQKQILTTISLCESQLMKIIEDTDIPSIEEGYLETSSDDFNLLEALDAVVSQ 972
Query: 962 VMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG-WVEIHVR 1020
VM L +E + + D P ++ + ++GD R+QQ+L++FL VR++P + G V+ V
Sbjct: 973 VMPLSQESQVHIKHDFPSDLSPVCLFGDNVRLQQILSNFLTIAVRFTPPSTGSSVKFAVS 1032
Query: 1021 PTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNG 1080
+ + H EFR+ P G+P L+++MF S M++ GL L + K++K+MNG
Sbjct: 1033 SRTEHVGSKMQMFHVEFRITHPLPGVPENLIREMFQRSPGMSRGGLSLYISHKLVKIMNG 1092
Query: 1081 EVQYIRESERCYFLIIFELPM 1101
+QY+R + F++ E P+
Sbjct: 1093 TLQYLRGEDYSSFIVFLEFPV 1113
>gi|218683855|gb|ACL00882.1| phytochrome B [Brassica oleracea]
Length = 653
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/653 (79%), Positives = 564/653 (86%), Gaps = 32/653 (4%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPAR+EDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAES+R DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESRREDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING++E+
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGSEED 180
Query: 366 A---VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GGRS+ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GSSVAGGRSSMRLWGLVVCHHTSSRCIPFPSRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y G YYPLGV PTE Q KD+V
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGNYYPLGVAPTEAQTKDVV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 577 SNSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVA 633
+ + + + + QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+A
Sbjct: 421 AMNSKTADGAVQPYSMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIA 480
Query: 634 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAV 693
EL+GLSVEEAMGKSLV DL+YKE EE VD L+ AL+G+ED+NVEIKL+TF E + KAV
Sbjct: 481 ELSGLSVEEAMGKSLVSDLIYKENEETVDKLISRALRGDEDRNVEIKLKTFSPELQGKAV 540
Query: 694 FVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 753
FVVVNACSSKDY+NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+
Sbjct: 541 FVVVNACSSKDYSNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAA 600
Query: 754 DENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
DENTCC EWNTA+EKLTGWSR ++IGKMLVGEVFGS CRLKGPDALTKFMI L
Sbjct: 601 DENTCCLEWNTALEKLTGWSRSEVIGKMLVGEVFGSYCRLKGPDALTKFMIVL 653
>gi|351722971|ref|NP_001238286.1| phytochrome A [Glycine max]
gi|1172495|sp|P42500.1|PHYA_SOYBN RecName: Full=Phytochrome A
gi|515749|gb|AAA33957.1| phytochrome A [Glycine max]
gi|515751|gb|AAA33999.1| phytochrome A [Glycine max]
Length = 1131
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/1109 (50%), Positives = 752/1109 (67%), Gaps = 58/1109 (5%)
Query: 42 IAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
+AQ TVDA++HA FE+SG S S + ++ ++ +AYL RG IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYL----RGKMIQP 77
Query: 99 FGCTIAVDEA----TFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
FGC +A+DE T +VIAYSEN EML + +VP++ L IGTD++TLFT+ S
Sbjct: 78 FGCLLAIDEKNHMQTCKVIAYSENEPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSV 137
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
L+KA G +++LLNPI +H K +GKPFYAI+HRV +++D EP + + ++ AGA+
Sbjct: 138 SGLQKALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGAL 197
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QS KLA +AI++LQSLP G+++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+ E +
Sbjct: 198 QSYKLAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIREITK 257
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
P LEPY GLHYPATDIPQASRFLF++N+VRMIVDCHA + V+QDE L L L GSTLR
Sbjct: 258 PCLEPYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLR 317
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA------------- 377
APH CHAQYMANM SIASL LAV++N N+E +AV + T RLW
Sbjct: 318 APHSCHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKTERLWGLVVCHNTTPRFVP 377
Query: 378 -------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIM 424
F ++ E++L Q+ EK++L L ML+RD+P GI ++SP+IM
Sbjct: 378 FPLRYAREFLPQVFADHVHKEIELEYQIIEKNILHHPGHLLCMLMRDAPLGIASESPNIM 437
Query: 425 DLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAAT 484
DLVKCDGAAL Y+ K + LGVTP+E QI++I WL YH DST STDSL DAG+P A +
Sbjct: 438 DLVKCDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTSFSTDSLFDAGFPSALS 497
Query: 485 LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 544
LGD VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDD +RMHPRSSFKAFLEV
Sbjct: 498 LGDVVCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEV 557
Query: 545 VKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS---NSKAVVNAQLVDLELQGVD----- 596
VK+RSLPW EMDAIHSLQ+ILR++F++ S N+KA +N +L DL+++G++
Sbjct: 558 VKARSLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKA-INTRLRDLKIEGINDLKIE 616
Query: 597 ---ELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLV 653
EL +V E+VRL TAT PI AVDV G VNGWN K+AELTGL + EA GK L+ LV
Sbjct: 617 RMQELEAVTSEIVRLDYTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLL-TLV 675
Query: 654 YKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVC 713
+ V +L+ AL GEE+KNV+ +++T G++ + +VVN C+S+D +N+VGVC
Sbjct: 676 EDSSTDRVKKMLNLALLGEEEKNVQFEIKTLGSKMDSGPISLVVNRCASRDLRDNVVGVC 735
Query: 714 FVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWS 773
FV D+T QK VMDKFI I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW
Sbjct: 736 FVAHDITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWK 795
Query: 774 RGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYV 830
R +++ KML+GE+FG+ CRLK +A + L+ A G +TEK PF F RNGKYV
Sbjct: 796 REEVMDKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYV 855
Query: 831 QALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKN 890
+ LL+ +K++++EG + G FCFLQ+ASPELQQAL +QR E+ RL L+Y+ ++I+N
Sbjct: 856 ECLLSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRN 915
Query: 891 PLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFL 950
PL G+ F+ +LE TDL +QKQLL TSA C++Q+ KI+ D DL++I DG L+ E AEF
Sbjct: 916 PLCGIVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFT 975
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L V+ +SQVM ++++++ D+ I +YGD R+QQVLADFLL + ++P+
Sbjct: 976 LHEVLVTSLSQVMEKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTPN 1035
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSM 1070
G V + T +Q + +V E + G G+P L+ MF ++ ++EG+ L +
Sbjct: 1036 G-GQVVVAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQMFGNNGLESEEGISLLI 1094
Query: 1071 CRKILKLMNGEVQYIRESERCYFLIIFEL 1099
K+LKLMNG+V+Y+RE+ + F++ EL
Sbjct: 1095 RAKLLKLMNGDVRYLREAGKSAFILSAEL 1123
>gi|218683873|gb|ACL00891.1| phytochrome B [Cochlearia acaulis]
Length = 651
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/651 (79%), Positives = 569/651 (87%), Gaps = 30/651 (4%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPART+DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT+VES
Sbjct: 1 ILHRIDVGVVIDLEPARTDDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTIVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAES+R DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESRRQDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIIN N+++
Sbjct: 121 IVDCHATPVLVVQDDRLAQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINANEDD 180
Query: 366 AV---GGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GGR++ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GSNVPGGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E+QIKD+V
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSESQIKDVV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA+LGDAVCGMAVA ITKRDFLFWFRSHTAKEIKW
Sbjct: 301 EWLLENHADSTGLSTDSLGDAGYPGAASLGDAVCGMAVACITKRDFLFWFRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 577 SNSKAVVNAQLVDLE-LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAEL 635
+ + V D+ QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+AEL
Sbjct: 421 AAADGAVQPCNKDMAGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKIAEL 480
Query: 636 TGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFV 695
TGLSVEEAMGKSL+ DL+YKE +E VD L+ AL+G+EDKNVE+KL+TF +E + KAVFV
Sbjct: 481 TGLSVEEAMGKSLISDLIYKENQETVDKLISSALRGDEDKNVEVKLKTFSSELQGKAVFV 540
Query: 696 VVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDE 755
VVNACSSKDY NNIVGVCFVGQDVT+QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+DE
Sbjct: 541 VVNACSSKDYLNNIVGVCFVGQDVTNQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 600
Query: 756 NTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
NTCC EWNTAMEKLTGWSRG++IGKMLVGEVFGSCC+LKG DALTKFMIAL
Sbjct: 601 NTCCLEWNTAMEKLTGWSRGEVIGKMLVGEVFGSCCKLKGADALTKFMIAL 651
>gi|37926849|gb|AAP06787.1| phytochrome A1 apoprotein [Zea mays]
gi|414872502|tpg|DAA51059.1| TPA: phytochromeA1 [Zea mays]
Length = 1131
Score = 1083 bits (2800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/1103 (49%), Positives = 743/1103 (67%), Gaps = 52/1103 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRG 93
++ +AQ T+DA L+A +E ESG SFDYS+ V + PEQQ + AYL IQRG
Sbjct: 22 ARILAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRG 78
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT
Sbjct: 79 KLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPG 138
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAG 212
+ L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AG
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAG 197
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS++QSLPGG ++ LC+TVV+ V LTGYDRVM Y+FHEDEHGEV AE
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMQALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEI 257
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P +EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GST
Sbjct: 258 TKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGST 317
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGND-------EEAVGGRSTTRLWA-------- 377
LRAPH CH QYM NM SIASL +AV++N N+ E+ + +LW
Sbjct: 318 LRAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEPESEQPPQQQKRKKLWGLIVCHHES 377
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS-PAGIVT 418
F + +N E +L Q+ EK +LR QT+L DML ++S P IV+
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKESSPLSIVS 437
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
SP+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAG
Sbjct: 438 GSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAG 497
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P D+DD +RMHPR SF
Sbjct: 498 YPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDEDDSRRMHPRLSF 557
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL
Sbjct: 558 KAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPAQSSGLDNQIGDLKLDGLAEL 617
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+V EMVRL+ETAT PI AVD +G VNGWN KVA+L+GL V+EA+G+ ++ LV
Sbjct: 618 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVADLSGLRVDEAIGRHIL-TLVEDSSV 676
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
IV +L+ AL+G E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD
Sbjct: 677 PIVQRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDMHDHVVGVCFVAQD 736
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
+T KLVMDKF ++GDY+AI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I
Sbjct: 737 MTVHKLVMDKFTRVEGDYRAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDEVI 796
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLT 835
+ML+GEVF S C LK DA + I +++A G++ EK P FDR+GKY++ LL+
Sbjct: 797 DRMLLGEVFDSSNASCLLKSKDAFVRLCIIINSALAGEEAEKAPIGFFDRDGKYIECLLS 856
Query: 836 ANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGV 895
N++VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+
Sbjct: 857 VNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTALRRLKAFSYMRHAIDKPLSGM 916
Query: 896 SFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGS 953
++ L+ TDL E+Q + + + C +Q+ KI+ D+D ++I D S L+ + AEF+L
Sbjct: 917 LYSRETLKGTDLDEEQMRQVRVADNCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLQD 976
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
V+ + VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP A G
Sbjct: 977 VVVSAVSQVLIGCQGKGIRVACNLPERSMKQKVYGDGIRLQQILSDFLFVSVKFSP-AGG 1035
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCR 1072
V+I + T E ++ E R+ G G+P E++ M+ +R ++EGL L + R
Sbjct: 1036 SVDISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYGEDNREQSEEGLSLLVSR 1095
Query: 1073 KILKLMNGEVQYIRESERCYFLI 1095
+L+LMNG+++++RE+ F++
Sbjct: 1096 NLLRLMNGDIRHLREAGMSTFIL 1118
>gi|218683843|gb|ACL00876.1| phytochrome B [Cleome hassleriana]
Length = 632
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/632 (82%), Positives = 553/632 (87%), Gaps = 31/632 (4%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+CVIQDE L QP
Sbjct: 61 GEVVAESKRADLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVCVIQDERLTQP 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
LCLVGSTLRAPHGCHAQYMANMGS+ASLA+AVIINGN+EEA GGR++ RLW
Sbjct: 121 LCLVGSTLRAPHGCHAQYMANMGSLASLAMAVIINGNEEEAGSVAGGRNSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SEK VLRTQTLLCDMLLRDSP GI
Sbjct: 181 HTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPTGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQ PSIMDLVKCDGAA YQG+YYPLGV P+E QIKDIVEWLL HGDSTGLSTDSLAD
Sbjct: 241 VTQKPSIMDLVKCDGAAFLYQGRYYPLGVAPSEAQIKDIVEWLLANHGDSTGLSTDSLAD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AATLGDAVCGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDD QRMHPRS
Sbjct: 301 AGYPGAATLGDAVCGMAVAYITRKDFLFWFRSHTAKEIKWGGAKHHPEDKDDSQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLV--DLELQG 594
SFKAFLEVVKSRSLPW+NAEMDAIHSLQLILRDSF+++E N++ V A D+ +QG
Sbjct: 361 SFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKESETVNTRVAVRADQPGGDMAVQG 420
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+DELS+VAREMVRLIETAT PI AVDV G +NGWN K+AELTGLSVEEAMGKSLV DL+Y
Sbjct: 421 LDELSAVAREMVRLIETATVPILAVDVEGRINGWNGKIAELTGLSVEEAMGKSLVRDLIY 480
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCF 714
KEYEE V+ LL HAL+GEEDKNVEIK++TF E +AVFVVVNACSSKDY NNIVGVCF
Sbjct: 481 KEYEETVEKLLSHALRGEEDKNVEIKMKTFSRELEGQAVFVVVNACSSKDYLNNIVGVCF 540
Query: 715 VGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSR 774
VGQDVT QK+VMDKFIHIQGDYKAIVHSPNPLIPPIFA+DENTCC EWNTAMEKLTGWSR
Sbjct: 541 VGQDVTGQKIVMDKFIHIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWSR 600
Query: 775 GDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
++IGKMLVGEVFGSCCRLKGPD LTKFMI L
Sbjct: 601 AEVIGKMLVGEVFGSCCRLKGPDTLTKFMIVL 632
>gi|218683885|gb|ACL00897.1| phytochrome B [Planodes virginica]
Length = 653
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/653 (80%), Positives = 568/653 (86%), Gaps = 32/653 (4%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+E+
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 366 AV---GGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GGR++ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GNNVGGGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIM+LVKCDGAA Y GKYY LGV PTE Q+KDIV
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMNLVKCDGAAFLYHGKYYRLGVAPTEAQLKDIV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE- 575
GGAKHHP+DKDDGQRMHPRSSF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++E
Sbjct: 361 GGAKHHPDDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEV 420
Query: 576 ASNSKAVVNA-QLVDLELQ-GVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVA 633
A NSKA A Q D+ + G+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+A
Sbjct: 421 AMNSKAADGAVQCRDMSGEHGLDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIA 480
Query: 634 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAV 693
ELTGLSVEEAMGKSLV DL+YKE EE V+ LL ALKG+EDKNVE+KL+TF E + KAV
Sbjct: 481 ELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALKGDEDKNVEVKLKTFSPELQGKAV 540
Query: 694 FVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFAS 753
F+VVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+
Sbjct: 541 FMVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAA 600
Query: 754 DENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
DENTCC EWNTAMEKLTGWSRG++IGKMLVGEVFG+CCRLK PDALT+FMI L
Sbjct: 601 DENTCCLEWNTAMEKLTGWSRGEVIGKMLVGEVFGNCCRLKSPDALTRFMIVL 653
>gi|218683883|gb|ACL00896.1| phytochrome B [Pachycladon novaezelandiae]
Length = 654
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/654 (80%), Positives = 565/654 (86%), Gaps = 33/654 (5%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPARTE PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARTEGPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDC+ATP+ V+Q++GL Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+E+
Sbjct: 121 IVDCYATPVLVVQEDGLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 366 A---VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GRS+ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QIKD+V
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA L DAVCGMAVAYITKRDFLFWFRSHT KEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALEDAVCGMAVAYITKRDFLFWFRSHTGKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 577 S-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+ NSK V A ++ QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+
Sbjct: 421 AMNSKTVDGAVQPYRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKI 480
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+EDKNVE+KL+TF E + KA
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKA 540
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
VFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
+DENTCC EWNTAMEKL GWSR ++IGKMLVGEVFG+CCRLKGPDALTKFMI L
Sbjct: 601 ADENTCCLEWNTAMEKLMGWSRSEVIGKMLVGEVFGNCCRLKGPDALTKFMIVL 654
>gi|39777259|gb|AAR30899.1| phytochrome A [Sorghum propinquum]
Length = 1131
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/1104 (49%), Positives = 741/1104 (67%), Gaps = 52/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRGGHI 96
+AQ T+DA L+A +E ESG SFDYS+ V + EQQ + AYL IQRG I
Sbjct: 25 LAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLI 81
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC +A DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT +
Sbjct: 82 QPFGCLLAFDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQ 215
L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AGA+Q
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAGALQ 200
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AIS++QSLPGG ++ LC+TVV+ V +LTGYDRVM Y+FHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE-------AVGGRSTTRLWA----------- 377
PH CH QYM NM SIASL +AV++N N+E+ + RLW
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSP 421
F + +N E +L Q+ EK +LR QT+L DML ++ SP IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DA YP
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDARYPG 500
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVK +SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL +V
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV IV
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSVSIV 679
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD+T
Sbjct: 680 QRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R ++I KM
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVF S C LK D + I +++A G++ EK F LFDRNGKY++ LL+ N+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAQFGLFDRNGKYIECLLSVNR 859
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+VN +G + G FCF+ + S +LQ AL VQ+ E+ RLK +Y+ I PLSG+ ++
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVIN 956
L++T L E+Q + + + +C +Q+ KI+ D+D ++I D S L+ + AEF+L V+
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
+ VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G V+
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVG-GSVD 1038
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCRKIL 1075
I + T E ++ E R+ G G+P E++ M+ ++ ++EGL L + R +L
Sbjct: 1039 ISSKLTKNSIGENLHLIDFELRIKHQGAGVPAEILSQMYEEDNKEQSEEGLSLLVSRNLL 1098
Query: 1076 KLMNGEVQYIRESERCYFLIIFEL 1099
+LMNG+++++RE+ F++ EL
Sbjct: 1099 RLMNGDIRHLREAGMSTFILTAEL 1122
>gi|218683861|gb|ACL00885.1| phytochrome B [Capsella bursa-pastoris]
Length = 654
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/654 (80%), Positives = 563/654 (86%), Gaps = 33/654 (5%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+E+
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 366 A---VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GRS+ RLW AFGLQLNMELQ A Q+SEK
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQPALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QIKD+V
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA LGDAVC MAVAYITKRDFLFWFRSHTAKEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCSMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 577 S-NSK---AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+ NSK VV QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+
Sbjct: 421 AMNSKTGDGVVQPYRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDTGGCINGWNAKI 480
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+EDKNVE+KL+TF E + KA
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFTPELQGKA 540
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
VFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
+DENTCC EWNTAMEKLTGWS +++GKMLVGEVFGSCC+LKGPDALTKFMI L
Sbjct: 601 ADENTCCLEWNTAMEKLTGWSLSEVVGKMLVGEVFGSCCKLKGPDALTKFMIVL 654
>gi|218683863|gb|ACL00886.1| phytochrome B [Capsella bursa-pastoris]
Length = 654
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/654 (80%), Positives = 564/654 (86%), Gaps = 33/654 (5%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQ+LPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+E+
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 366 A---VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GRS+ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QIKD+V
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++ A
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESGA 420
Query: 577 S-NSK---AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+ NSK VV QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+
Sbjct: 421 AMNSKTGDGVVQPYRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKI 480
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+EDKNVE+KL+TF E + KA
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFTPELQGKA 540
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
VFV+VNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA
Sbjct: 541 VFVIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
+DENTCC EWNTAMEKLTG SR +++GKMLVGEVFGSCC+LKGPDALTKFMI L
Sbjct: 601 ADENTCCLEWNTAMEKLTGLSRSEVVGKMLVGEVFGSCCKLKGPDALTKFMIVL 654
>gi|20288|emb|CAA32375.1| phytochrome [Oryza sativa Indica Group]
Length = 1128
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/1104 (49%), Positives = 743/1104 (67%), Gaps = 52/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRGGHI 96
+AQ T+DA L+A +E E G SFDYS+ V + PEQQ + AYL IQR I
Sbjct: 25 LAQTTLDAELNAEYE---EYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLI 81
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC +A+DE TF VIA SENA EML +VP+++ L IGT+VR+LFT +
Sbjct: 82 QPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVRSLFTDPGTTA 141
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQ 215
L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AGA+Q
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAGALQ 200
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AIS++QSLPGG +++LC+TVV+ + LTGYDRVM Y+FHED+HGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKP 260
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GSTLRA
Sbjct: 261 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRA 320
Query: 336 PHGCHAQYMANMGSIASLALAVIINGN-DEEAVGG------RSTTRLWA----------- 377
PH CH QYM NM SIASL +AV++N N D++ VG + +LW
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRY 380
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSP 421
F + +N E +L Q+ EK +LR QT+L DMLLR+ SP IV+ +P
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTP 440
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y GK + L PTE+QI+DI WL H DSTGLSTDSL DAGYP
Sbjct: 441 NIMDLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPG 500
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
AA LGD +CGMAVA I +D LFWFRSHTA EI+WGGAKH P DKDD +RMHPR SFKAF
Sbjct: 501 AAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAF 560
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVK +SLPW++ EMDAIHSLQLILR + D A ++ Q+ DL+L G+ EL +V
Sbjct: 561 LEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAV 620
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRL+ETAT PI AVD +G VNGWN KVAELTGL V+EA+G+ ++ +V + +V
Sbjct: 621 TSEMVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHIL-TVVEESSVPVV 679
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G+E+K V+ +++T G++ V +VVNAC+S+D +++VGVCFV QD+T
Sbjct: 680 QRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
KLVMDKF ++GDYKAI+H+P+PLIPPIF +DE CSEWN AM KLTGW R ++I KM
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVINKM 799
Query: 782 LVGEVFGSC---CRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVF S C +K DA I +++A G +TEK PF FDRNGKY++ LL+ N+
Sbjct: 800 LLGEVFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLSVNR 859
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+VN +G I G FCF+Q+ S ELQ AL VQ+ ++ +LK +Y+ I NPLSG+ ++
Sbjct: 860 KVNADGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGMLYS 919
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVIN 956
L+ T L E+Q + + + +C +Q+ KI+ D+D +S+ + S L+ E EF+L V
Sbjct: 920 RKALKNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSVMNKSSCLDLEMVEFVLQDVFV 979
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
A VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G VE
Sbjct: 980 AAVSQVLITCQGKGIRVSCNLPERYMKQTVYGDGVRLQQILSDFLFVSVKFSPVG-GSVE 1038
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFH-SSRWMTQEGLGLSMCRKIL 1075
I T E ++ E R+ G+G+P +L+ M+ ++ + EG+ L++ R +L
Sbjct: 1039 ISCSLTKNSIGENLHLIDLELRIKHQGKGVPADLLSQMYEDDNKEQSDEGMSLAVSRNLL 1098
Query: 1076 KLMNGEVQYIRESERCYFLIIFEL 1099
+LMNG+V+++RE+ F++ EL
Sbjct: 1099 RLMNGDVRHMREAGMSTFILSVEL 1122
>gi|218683847|gb|ACL00878.1| phytochrome B [Arabidopsis halleri]
Length = 654
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/654 (79%), Positives = 564/654 (86%), Gaps = 33/654 (5%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDC+A P+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+E+
Sbjct: 121 IVDCNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 366 A---VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GRS+ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QIKD+V
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPR SF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA
Sbjct: 361 GGAKHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 577 S-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+ NSKAV A ++ QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+
Sbjct: 421 AMNSKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKI 480
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+E++NVE+KL+TF E + KA
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEERNVEVKLKTFSPELQGKA 540
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
VFVVVNAC SKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA
Sbjct: 541 VFVVVNACFSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
+DENTCC EWN AMEKLTGWSR ++IGKMLVGEVFGSCC LKGPDALTKFMI L
Sbjct: 601 ADENTCCLEWNMAMEKLTGWSRSEVIGKMLVGEVFGSCCMLKGPDALTKFMIVL 654
>gi|186478305|ref|NP_001117256.1| phytochrome A [Arabidopsis thaliana]
gi|332190342|gb|AEE28463.1| phytochrome A [Arabidopsis thaliana]
Length = 1014
Score = 1075 bits (2780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/1013 (52%), Positives = 718/1013 (70%), Gaps = 42/1013 (4%)
Query: 125 LAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFY 184
+A +VP++ + +L IGTD+R+LFT+ S+ L+KA G +++LLNPI +H + + KPFY
Sbjct: 1 MASHAVPSVGEHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFY 60
Query: 185 AILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVE 244
AI+HRV I+ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+
Sbjct: 61 AIIHRVTGSIIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQ 120
Query: 245 SVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVR 304
V +LTGYDRVM Y+FHED+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VR
Sbjct: 121 EVFELTGYDRVMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVR 180
Query: 305 MIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE 364
MIVDC+A V+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D
Sbjct: 181 MIVDCNAKHARVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDG 240
Query: 365 EAVGGRSTT------RLWA--------------------------FGLQLNMELQLASQL 392
E +TT RLW F + +N E++L +Q+
Sbjct: 241 EGDAPDATTQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQM 300
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
EK++LRTQTLLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +
Sbjct: 301 VEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHL 360
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
++I WL YH DSTGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA
Sbjct: 361 QEIASWLCEYHMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAG 420
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
E++WGGAKH P+D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+
Sbjct: 421 EVRWGGAKHDPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK 480
Query: 573 DAEASN-SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAK 631
D+E ++ + V+ ++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K
Sbjct: 481 DSETTDVNTKVIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTK 540
Query: 632 VAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKK 691
+AELTGLSV+EA+GK + LV EIV +L +AL+G E++NV+ +++T +
Sbjct: 541 IAELTGLSVDEAIGKHFL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAG 599
Query: 692 AVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIF 751
+ +VVNAC+S+D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF
Sbjct: 600 PISLVVNACASRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIF 659
Query: 752 ASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHN 808
+DE C+EWN AM KLTG R ++I KML+GEVFG SCCRLK +A I L+N
Sbjct: 660 GTDEFGWCTEWNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNN 719
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
A QD EK F F R GKYV+ LL +K+++ EG + G FCFLQ+AS ELQQAL VQR
Sbjct: 720 AVTSQDPEKVSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQR 779
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
E+ RLK LAYI ++I+NPLSG+ FT ++E T+L +Q+++L+TSA C+KQ+ KI
Sbjct: 780 LAERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKI 839
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D DLESI +G L+ E EF L V+ A SQVMM +++++ + EE+ + +YG
Sbjct: 840 LDDSDLESIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYG 899
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTI--VHNEFRMVCPGEGL 1046
D R+QQVLADF+L V ++PS ++ V +L++ G+++ + E R+ G G+
Sbjct: 900 DSIRLQQVLADFMLMAVNFTPSGG---QLTVSASLRKDQLGRSVHLANLEIRLTHTGAGI 956
Query: 1047 PPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
P L+ MF + +++EGL L + RK++KLMNG+VQY+R++ + F+I EL
Sbjct: 957 PEFLLNQMFGTEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAEL 1009
>gi|130186|sp|P19862.1|PHYA1_MAIZE RecName: Full=Phytochrome A
gi|29293912|gb|AAO73469.1| phytochrome A2 [Zea mays]
gi|129560387|gb|ABO30572.1| phytochrome A2 [Zea mays]
gi|413933241|gb|AFW67792.1| phytochrome A [Zea mays]
Length = 1131
Score = 1075 bits (2779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/1104 (49%), Positives = 742/1104 (67%), Gaps = 52/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRGGHI 96
+AQ T+DA L+A +E ESG SFDYS+ V + PEQQ + AYL IQRG I
Sbjct: 25 LAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKLI 81
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC +A+DE +FRVIA+SENA EML +VPN++ L IGT+VR+LFT +
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQ 215
L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AGA+Q
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAGALQ 200
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AIS++QSLPGG ++ LC+TVV+ V LTGYDRVM Y+FHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GSTLRA
Sbjct: 261 GIEPYIGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRA 320
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT-------RLWA----------- 377
PH CH +YM NM SIASL +AV++N N+E+ RLW
Sbjct: 321 PHSCHLKYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS-PAGIVTQSP 421
F + +N E +L Q+ EK++LR QT+L DML ++S P IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKNILRMQTMLSDMLFKESSPLSIVSGSP 440
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y K + L PTE+QI+DI WL HGDSTGLSTDSL DAGYP
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
AA+LGD +CGMAVA IT +D LFWFRSHTA EIKWGGAKH P DKDD +RMHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVK++SLPW + EMDAIHSLQLILR + DA + ++ Q+ DL+L G+ EL +V
Sbjct: 561 LEVVKTKSLPWSDYEMDAIHSLQLILRGTLNDASKPAQASGLDNQIGDLKLDGLAELQAV 620
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRL+ETAT PI AVD +G VNGWN KVAEL+GL V+EA+G+ ++ LV +V
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDSSVSLV 679
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G E+K V +L+T G++ V +VVNAC+S+D +++VGVCFV QD+T
Sbjct: 680 QRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
KLVMDKF ++GDYKAI+H+PNPLIPPIF +D+ CSEWN AM KLTGW R +++ KM
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDEVVDKM 799
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVF S C LK DA + I +++A G++ EK F FDRN KYV+ LL+ N+
Sbjct: 800 LLGEVFNSSNASCLLKSKDAFVRLCIVINSALAGEEAEKASFGFFDRNEKYVECLLSVNR 859
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+VN +G + G FCF+ + S +LQ AL VQ+ E+ +LK +Y+ I PLSG+ ++
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRKLKAFSYMRHAINKPLSGMLYS 919
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVIN 956
L++T L E+Q + + C +Q+ KI+ D+D ++I D S L+ + AEF+L V+
Sbjct: 920 RETLKSTGLNEEQMRQVRVGDNCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLQDVVV 979
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
+ VSQV++ + + +++ ++PE VYGD R+QQ+++DFL V++SP A G V+
Sbjct: 980 SAVSQVLIGCQAKGIRVACNLPERSMKQKVYGDGIRLQQIVSDFLFVSVKFSP-AGGSVD 1038
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCRKIL 1075
I + T E ++ E R+ G G+P E++ M+ ++ ++EG L++ R +L
Sbjct: 1039 ISSKLTKNSIGENLHLIDFELRIKHRGAGVPAEILSQMYEEDNKEQSEEGFSLAVSRNLL 1098
Query: 1076 KLMNGEVQYIRESERCYFLIIFEL 1099
+LMNG+++++RE+ F++ EL
Sbjct: 1099 RLMNGDIRHLREAGMSTFILTAEL 1122
>gi|115454991|ref|NP_001051096.1| Os03g0719800 [Oryza sativa Japonica Group]
gi|122246800|sp|Q10DU0.1|PHYA_ORYSJ RecName: Full=Phytochrome A
gi|158513187|sp|A2XLG5.2|PHYA_ORYSI RecName: Full=Phytochrome A
gi|21321786|gb|AAM47309.1|AF377946_11 phytochrome A [Oryza sativa Japonica Group]
gi|30578176|dbj|BAC76431.1| phytochrome A [Oryza sativa Japonica Group]
gi|50540697|gb|AAT77854.1| phytochrome [Oryza sativa Japonica Group]
gi|108710785|gb|ABF98580.1| Phytochrome A, putative, expressed [Oryza sativa Japonica Group]
gi|113549567|dbj|BAF13010.1| Os03g0719800 [Oryza sativa Japonica Group]
gi|125587730|gb|EAZ28394.1| hypothetical protein OsJ_12374 [Oryza sativa Japonica Group]
gi|215704150|dbj|BAG92990.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1128
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/1104 (49%), Positives = 742/1104 (67%), Gaps = 52/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRGGHI 96
+AQ T+DA L+A +E E G SFDYS+ V + PEQQ + AYL IQR I
Sbjct: 25 LAQTTLDAELNAEYE---EYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLI 81
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
QPFGC +A+DE TF VIA SENA EML +VP+++ L IGT+V +LFT +
Sbjct: 82 QPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGATA 141
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQ 215
L+KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AGA+Q
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAGALQ 200
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AIS++QSLPGG +++LC+TVV+ + LTGYDRVM Y+FHED+HGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKP 260
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +I+DE L + L GSTLRA
Sbjct: 261 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRA 320
Query: 336 PHGCHAQYMANMGSIASLALAVIINGN-DEEAVGG------RSTTRLWA----------- 377
PH CH QYM NM SIASL +AV++N N D++ VG + +LW
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRY 380
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSP 421
F + +N E +L Q+ EK +LR QT+L DMLLR+ SP IV+ +P
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTP 440
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y GK + L PTE+QI+DI WL H DSTGLSTDSL DAGYP
Sbjct: 441 NIMDLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPG 500
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
AA LGD +CGMAVA I +D LFWFRSHTA EI+WGGAKH P DKDD +RMHPR SFKAF
Sbjct: 501 AAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAF 560
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVK +SLPW++ EMDAIHSLQLILR + D A ++ Q+ DL+L G+ EL +V
Sbjct: 561 LEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAV 620
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRL+ETAT PI AVD +G VNGWN KVAELTGL V+EA+G+ ++ +V + +V
Sbjct: 621 TSEMVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHIL-TVVEESSVPVV 679
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G+E+K V+ +++T G++ V +VVNAC+S+D +++VGVCFV QD+T
Sbjct: 680 QRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
KLVMDKF ++GDYKAI+H+P+PLIPPIF +DE CSEWN AM KLTGW R ++I KM
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVINKM 799
Query: 782 LVGEVFGSC---CRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVF S C +K DA I +++A G +TEK PF FDRNGKY++ LL+ N+
Sbjct: 800 LLGEVFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLSVNR 859
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+VN +G I G FCF+Q+ S ELQ AL VQ+ ++ +LK +Y+ I NPLSG+ ++
Sbjct: 860 KVNADGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGMLYS 919
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVIN 956
L+ T L E+Q + + + +C +Q+ KI+ D+D +S+ + S L+ E EF+L V
Sbjct: 920 RKALKNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSVMNKSSCLDLEMVEFVLQDVFV 979
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
A VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G VE
Sbjct: 980 AAVSQVLITCQGKGIRVSCNLPERYMKQTVYGDGVRLQQILSDFLFVSVKFSPVG-GSVE 1038
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFH-SSRWMTQEGLGLSMCRKIL 1075
I T E ++ E R+ G+G+P +L+ M+ ++ + EG+ L++ R +L
Sbjct: 1039 ISCSLTKNSIGENLHLIDLELRIKHQGKGVPADLLSQMYEDDNKEQSDEGMSLAVSRNLL 1098
Query: 1076 KLMNGEVQYIRESERCYFLIIFEL 1099
+LMNG+V+++RE+ F++ EL
Sbjct: 1099 RLMNGDVRHMREAGMSTFILSVEL 1122
>gi|218683879|gb|ACL00894.1| phytochrome B [Lepidium alyssoides]
Length = 654
Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/654 (79%), Positives = 562/654 (85%), Gaps = 33/654 (5%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFL KQNR+RM
Sbjct: 61 VRNLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLIKQNRIRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIING +E+
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGIEED 180
Query: 366 A---VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GG+++ RLW AFGLQLNMELQLA Q++EK
Sbjct: 181 GGNVAGGKNSMRLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLALQMAEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y G+YYPLGV PTE QIKDIV
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGRYYPLGVAPTEVQIKDIV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYIT+RDFLFW RSHTAKEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITERDFLFWLRSHTAKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+D+EA
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKDSEA 420
Query: 577 S-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+ NSK A ++ QGVDEL +VAREMVRLIETAT PIFAVD G +NGWNAK+
Sbjct: 421 AINSKTADGAVQPFRDMTGEQGVDELGAVAREMVRLIETATVPIFAVDAGGYINGWNAKI 480
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGLSVEEAMGKSLV DL+YK+ EE VD L+ AL+GEEDKNVE+KL+TF E + +A
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKQNEETVDKLISRALRGEEDKNVEVKLKTFSPELQGRA 540
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
VFVVVNACSSKDY NNIVGVCFVGQD+T QK+V+DKFI+IQGDYKAIVHSPNPLIPPIFA
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDITGQKIVVDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
+DENTCC EWNTAMEKL+GWSR ++IGKMLVGEVFGS CRLKGPDALTKFMI L
Sbjct: 601 ADENTCCLEWNTAMEKLSGWSRSEVIGKMLVGEVFGSSCRLKGPDALTKFMIVL 654
>gi|218683869|gb|ACL00889.1| phytochrome B [Pachycladon stellatum]
Length = 654
Score = 1068 bits (2762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/654 (79%), Positives = 560/654 (85%), Gaps = 33/654 (5%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGY RVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYHRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+E+
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 366 A---VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GRS+ RLW AFGLQLNMELQLA Q+SE
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSHCIPFPLRYACEFLMQAFGLQLNMELQLALQMSETR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y GKYY LGV P+E QI DIV
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYLLGVAPSEVQINDIV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DST LSTDSL DAGYP+AA LGDAVCGMAVAYITKRDFLFWFRSHT KEIKW
Sbjct: 301 EWLLANHSDSTRLSTDSLGDAGYPRAAALGDAVCGMAVAYITKRDFLFWFRSHTGKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS P + A MDAIHSLQLILRDSF+++EA
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPRETAGMDAIHSLQLILRDSFKESEA 420
Query: 577 S-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+ NSK V A ++ QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+
Sbjct: 421 AMNSKTVDGAVQPYRDMVGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKI 480
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGLSVEEAMGKSLV DL+YKE EE V+ LL AL+G+EDKNVE+KL+TF E + KA
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKA 540
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
VFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
+DENTCC EWNTAMEKL GWSR ++IGKMLVGEVFG+CCRLKGPDALTKFMI L
Sbjct: 601 ADENTCCLEWNTAMEKLMGWSRSEVIGKMLVGEVFGNCCRLKGPDALTKFMIVL 654
>gi|218683915|gb|ACL00912.1| phytochrome D [Draba altaica]
Length = 655
Score = 1067 bits (2760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/655 (78%), Positives = 563/655 (85%), Gaps = 34/655 (5%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHA+P+ V++ + L Q +CLVGSTLR+PHGCHAQYMANMGSIASLA+AVIINGN+E+
Sbjct: 121 IVDCHASPVRVVKGDRLTQSICLVGSTLRSPHGCHAQYMANMGSIASLAMAVIINGNEED 180
Query: 366 A----VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEK 395
GGR++ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 396 HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 455
VLR QTLLCDMLLRDSPAGIVTQSPSIMDLVKC+GAA YQGKYY LGV P+E QI DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQINDI 300
Query: 456 VEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 515
VEWLL H DSTGLSTDSL DAGYPKAA LG+AVCGMAVAYITKRDFLFWFRSHT KEIK
Sbjct: 301 VEWLLANHSDSTGLSTDSLVDAGYPKAAALGNAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 516 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++E
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 576 ASNSKAVVNA--QLVDLEL--QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAK 631
A +SK+ Q D E+ QG+ E+ +VAREMVRLIETAT PIFAVD+ GCVNGWNAK
Sbjct: 421 AMDSKSAAAGAVQPHDQEMAEQGLKEVGAVAREMVRLIETATVPIFAVDMDGCVNGWNAK 480
Query: 632 VAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKK 691
+AELTGLSVE+AMGKSLV DL++KEYEE VD LL ALKG+E KNVE+KL+TFG+E + K
Sbjct: 481 IAELTGLSVEDAMGKSLVRDLIHKEYEETVDRLLSRALKGDEGKNVEVKLKTFGSELQAK 540
Query: 692 AVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIF 751
AVFVVVNACSSKDY NNIVGVCFVGQDVT QK+VMDKFI+IQ DYKAI+HSPNPLIPPIF
Sbjct: 541 AVFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQRDYKAIIHSPNPLIPPIF 600
Query: 752 ASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
A+DENTCC EWN AMEKLTGW R ++IGK+LVGEVFGSCC+LKGPDA+TKFMI L
Sbjct: 601 AADENTCCLEWNAAMEKLTGWPRSEVIGKLLVGEVFGSCCKLKGPDAITKFMIVL 655
>gi|218683931|gb|ACL00919.1| phytochrome D [Pachycladon exile]
Length = 650
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/651 (78%), Positives = 560/651 (86%), Gaps = 31/651 (4%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+V+DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVLDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVR+
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRI 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHA+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYMANM SIASLA+AV+INGN+E+
Sbjct: 121 IVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVMINGNEED 180
Query: 366 A----VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEK 395
GGR++ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GNCVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 396 HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 455
VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYYPLGV PTE QI DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDI 300
Query: 456 VEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 515
V+WLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT KEIK
Sbjct: 301 VKWLLANHSDSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 516 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
WGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++E
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 576 ASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAEL 635
A+ + AV D+ QG+ E+ +VAREMVRLIETAT PIFAV++ GC+NGWNAK+AEL
Sbjct: 421 AAAAGAV-QTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVNIDGCINGWNAKIAEL 479
Query: 636 TGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFV 695
TGLSVEEAMGKSLV DL+YKEYEE VD LL ALKG+E KNVE+KL+TFG E + KAVFV
Sbjct: 480 TGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKNVEVKLKTFGPELQGKAVFV 539
Query: 696 VVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDE 755
V+NACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DE
Sbjct: 540 VINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADE 599
Query: 756 NTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
NTCC EWNTAMEKLTGW R ++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 600 NTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 650
>gi|218683929|gb|ACL00918.1| phytochrome D [Pachycladon exile]
Length = 650
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/651 (79%), Positives = 558/651 (85%), Gaps = 31/651 (4%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVR+
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRI 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHA+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYMANM SIASLA+AVIINGN+E+
Sbjct: 121 IVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVIINGNEED 180
Query: 366 A----VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEK 395
GGR++ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GNCVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFPMQAFGLQLNMELQLALQVSEK 240
Query: 396 HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 455
VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYYPLGV PTE QI DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDI 300
Query: 456 VEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 515
V+WLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT KEIK
Sbjct: 301 VKWLLANHSDSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 516 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
WGGAKHHPEDKDDGQRMHPRSSF+AFLE VKSR PW+ AEMDAIHSLQLILRDSF+++E
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFQAFLEAVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 576 ASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAEL 635
A+ + AV D+ QG+ E+ +VAREMVRLIETAT PIFAV++ GC+NGWNAK+AEL
Sbjct: 421 AAAAGAV-QTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVNIDGCINGWNAKIAEL 479
Query: 636 TGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFV 695
TGLSVEEAMGKSLV DL+YKEYEE VD LL ALKG+E KNVE+KL+TFG E + KAVFV
Sbjct: 480 TGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKNVEVKLKTFGPELQGKAVFV 539
Query: 696 VVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDE 755
V+NACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DE
Sbjct: 540 VINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADE 599
Query: 756 NTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
NTCC EWNTAMEKLTGW R ++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 600 NTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 650
>gi|218683841|gb|ACL00875.1| phytochrome B [Polanisia dodecandra]
Length = 632
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/632 (81%), Positives = 553/632 (87%), Gaps = 31/632 (4%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRA SQLQSLPGGDIKLLCDTVV+SVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAXSQLQSLPGGDIKLLCDTVVQSVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+ VIQDE QP
Sbjct: 61 GEVVAESKRGDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVIQDERFKQP 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
LCLVGSTLRAPHGCHAQYMANMG++ASLA+AVIINGN+E+ GGR++ RLW
Sbjct: 121 LCLVGSTLRAPHGCHAQYMANMGTMASLAMAVIINGNEEDTNSVAGGRNSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SEK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGAA YQGKYYPLGV P+E QIKDIV+WLL H DSTGLSTDSLAD
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYQGKYYPLGVAPSEAQIKDIVQWLLANHADSTGLSTDSLAD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYIT+RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITRRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVD--LELQG 594
SFKAFLEVVKSRS+PW+NAEMDAIHSLQLILRDSF+++EA N+KA V A + +QG
Sbjct: 361 SFKAFLEVVKSRSMPWENAEMDAIHSLQLILRDSFKESEAINAKAAVRADQPGGAMTVQG 420
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+DELS+VAREMVRLIETAT PIFAVDV G +NGWNAK+AELTGLSVEEAMGKSLVH+L+Y
Sbjct: 421 LDELSAVAREMVRLIETATVPIFAVDVDGRINGWNAKIAELTGLSVEEAMGKSLVHELIY 480
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCF 714
+EYEE V+ LL AL+G+EDKNVE+KL+TF E KAVFVVV+ACSSKDY NNIVGVCF
Sbjct: 481 EEYEETVEKLLSRALRGDEDKNVEVKLKTFNRELEGKAVFVVVSACSSKDYLNNIVGVCF 540
Query: 715 VGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSR 774
VGQDVT QK+VMDKFIHIQGDYKAIVHSPNPLIPPIFA+DENTCC EWNTAMEKLTGWS
Sbjct: 541 VGQDVTGQKIVMDKFIHIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWSG 600
Query: 775 GDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
++IGKMLVGEVFGSCC+LKGPDALTKFMI L
Sbjct: 601 AEVIGKMLVGEVFGSCCQLKGPDALTKFMIVL 632
>gi|166563|gb|AAA76820.1| phytochrome [Avena sativa]
Length = 1129
Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/1107 (49%), Positives = 737/1107 (66%), Gaps = 52/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRG 93
++ +AQ T+DA L+A +E ESG SFDYS+ V P QQ + AYL IQ+G
Sbjct: 20 ARVLAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKG 76
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQ FGC +A+DE +F VIA+SENA EML +VP+++ L IGT+VR+LF+
Sbjct: 77 KLIQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQG 136
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAG 212
+ L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AG
Sbjct: 137 ATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAG 195
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS++QSLPGG +++LC+TVV+ V LTGYDRVM Y+FHED+HGEV +E
Sbjct: 196 ALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEI 255
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + VI+ E L + L GS
Sbjct: 256 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSA 315
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDE-------EAVGGRSTTRLWA-------- 377
LRAPH CH QYM NM SIASL +AV++N N+E + + +LW
Sbjct: 316 LRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHES 375
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVT 418
F + +N E +L QL EK++L+ QT+L DML R+ SP IV+
Sbjct: 376 PRYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVS 435
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
+P+IMDLVKCDGAAL Y GK + L PTE+QI DI WL H DSTGLSTDSL DAG
Sbjct: 436 GTPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAG 495
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA LGD +CGMAVA I +D LFWFRSHTA EI+WGGAK+ P D DD +RMHPR SF
Sbjct: 496 YPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSF 555
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK +SLPW + EMDAIHSLQLILR + DA +A ++ Q+ DL+L G+ EL
Sbjct: 556 KAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAEL 615
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV
Sbjct: 616 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEDSSV 674
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
+V +L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV QD
Sbjct: 675 PVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 734
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
+T KLVMDKF ++GDYKAI+H+PNPLIPPIF +DE CSEWN AM KLTGW+R +++
Sbjct: 735 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVL 794
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLT 835
KML+GEVF S C LK DA + +++A G++TEK PF FDR+GKY++ LL+
Sbjct: 795 DKMLLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLS 854
Query: 836 ANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGV 895
AN++ N G I G FCF+ +AS ELQ AL VQ+ E+ RLK +Y+ I NPLSG+
Sbjct: 855 ANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGM 914
Query: 896 SFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGS 953
++ L+ TDL E+Q + + C Q+ KI+ D+D +SI + S L+ E AEFLL
Sbjct: 915 LYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSCLDLEMAEFLLQD 974
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
V+ A VSQV++ + + +++ ++PE +VYGD R+QQ+L+DFL V++SP G
Sbjct: 975 VVVAAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPVG-G 1033
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCR 1072
VEI + T E ++ E R+ G G+P EL+ MF ++ ++EGL L + R
Sbjct: 1034 SVEISSKLTKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDNKEQSEEGLSLLVSR 1093
Query: 1073 KILKLMNGEVQYIRESERCYFLIIFEL 1099
+L+LMNG+V+++RE+ F+I EL
Sbjct: 1094 NLLRLMNGDVRHLREAGVSTFIITAEL 1120
>gi|218683893|gb|ACL00901.1| phytochrome B [Stanleya pinnata]
Length = 633
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/633 (80%), Positives = 547/633 (86%), Gaps = 32/633 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAES+R DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+ V+QD+ L Q
Sbjct: 61 GEVVAESRRDDLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
+CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+E+ GGRS+ RLW
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNVAGGRSSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SEK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGAA Y GKYYPLGV PTE QIKD+VEWLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLEL---Q 593
SFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA+ + + + + Q
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAIQPCSMAGEQ 420
Query: 594 GVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLV 653
G+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV DL+
Sbjct: 421 GIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLI 480
Query: 654 YKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVC 713
YKE EE VD L+ ALKG+EDKNVEIKL+TF E + KAVFVVVNACSSKDY+NNIVGVC
Sbjct: 481 YKENEETVDKLIARALKGDEDKNVEIKLKTFSPELQGKAVFVVVNACSSKDYSNNIVGVC 540
Query: 714 FVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWS 773
FVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+DENTCC EWNTAMEKLTGWS
Sbjct: 541 FVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWS 600
Query: 774 RGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
R ++IGKMLVGEVFGSCCRLKGPDALTKFMI L
Sbjct: 601 RSEVIGKMLVGEVFGSCCRLKGPDALTKFMIVL 633
>gi|218683903|gb|ACL00906.1| phytochrome D [Arabidopsis kamchatica]
Length = 655
Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/655 (78%), Positives = 560/655 (85%), Gaps = 34/655 (5%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDT+VES
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTLVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHA+P+ V+QDE L Q +CLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGN+E+
Sbjct: 121 IVDCHASPVRVVQDERLTQSICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNEED 180
Query: 366 A----VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEK 395
VGGR++ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GNGVNVGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 396 HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 455
VLR QTLLCDMLLRDSPAGIVTQ+PSIMDLVKC+GAA Y GKYY LGV PTE QI I
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQNPSIMDLVKCNGAAFLYHGKYYSLGVAPTEAQINYI 300
Query: 456 VEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 515
VEWLL H DSTGLSTDSL DAGYP+AA LG+AVCGMAVAYITKRDFLFWFRSH+ KEIK
Sbjct: 301 VEWLLANHSDSTGLSTDSLGDAGYPQAAALGNAVCGMAVAYITKRDFLFWFRSHSEKEIK 360
Query: 516 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
WGGAKHHP+DKDDGQRMHPRSSFKAFLEVVKSR PW+ AEMDAIHSLQLILRDSF++AE
Sbjct: 361 WGGAKHHPDDKDDGQRMHPRSSFKAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKEAE 420
Query: 576 ASNSKAVVNAQLV----DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAK 631
A +SKA ++ D+ QG++E+ +VAREMVRLIETAT PI AVD GC+NGWNAK
Sbjct: 421 AMDSKAAAAGEVQPHGQDMAEQGMEEIGAVAREMVRLIETATVPILAVDRDGCINGWNAK 480
Query: 632 VAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKK 691
+AELTGLSVEEAMGKSLV DL++KEYEE VD LL ALKG+EDKNVE+KL+TFG+E + K
Sbjct: 481 IAELTGLSVEEAMGKSLVRDLIHKEYEETVDRLLSSALKGDEDKNVEVKLKTFGSELQGK 540
Query: 692 AVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIF 751
AVF+VVNACSSK NN+VGVCFVGQDVT +K+VMDKF+ IQGDYKAI+HSPNPLIPPIF
Sbjct: 541 AVFLVVNACSSKVQLNNVVGVCFVGQDVTGEKIVMDKFVDIQGDYKAIIHSPNPLIPPIF 600
Query: 752 ASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
A+DENTCC EWNTAMEKLTGW R ++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 601 AADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 655
>gi|218683911|gb|ACL00910.1| phytochrome D [Capsella bursa-pastoris]
Length = 658
Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/658 (78%), Positives = 555/658 (84%), Gaps = 36/658 (5%)
Query: 185 AILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVE 244
AILHRVDVGI+IDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVV+
Sbjct: 1 AILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVD 60
Query: 245 SVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVR 304
SVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPAT IPQASRFLFKQNRVR
Sbjct: 61 SVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATGIPQASRFLFKQNRVR 120
Query: 305 MIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE 364
MIVDCHA+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGN+E
Sbjct: 121 MIVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEE 180
Query: 365 EA------VGGRSTTRLW--------------------------AFGLQLNMELQLASQL 392
+ GGR++ RLW AFGLQLNMELQLA Q+
Sbjct: 181 DGNGVNSNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQV 240
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
SEK VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYY LGV PTE QI
Sbjct: 241 SEKRVLRMQTLLCDMLLRDSPAGIVTQKPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQI 300
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
DIV+W+L H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYITKRDFLFWFRSHT K
Sbjct: 301 NDIVKWVLGNHSDSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEK 360
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
EIKWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSR PW+ AEMDAIHSLQLILRDSF+
Sbjct: 361 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFK 420
Query: 573 DAEASNSKAVVNAQLVD----LELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++EA NSKA L + QG+ E+ +VAREMVRLIETAT PIFAVD+ GC+NGW
Sbjct: 421 ESEAMNSKAAAAGALQPHGEAMAEQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGW 480
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
NAK+AELTGLS EEAMGKSLV DL+YKEYEE VD LL ALKG E KNVE+KL+TFG E
Sbjct: 481 NAKIAELTGLSAEEAMGKSLVRDLIYKEYEETVDRLLSCALKGGESKNVEVKLQTFGLEL 540
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ KAVFVVVN CSSKDY NNIVGVCFVGQDVT K+VMDKF++IQGDYKAI+HSPNPLIP
Sbjct: 541 QGKAVFVVVNPCSSKDYLNNIVGVCFVGQDVTGHKIVMDKFVNIQGDYKAIIHSPNPLIP 600
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
PIFA+DEN CC EWNTAMEKLTGW R ++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 601 PIFAADENICCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 658
>gi|255642605|gb|ACU21560.1| phytochrome A [Medicago sativa]
Length = 1001
Score = 1059 bits (2739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/1000 (52%), Positives = 708/1000 (70%), Gaps = 39/1000 (3%)
Query: 141 IGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP 200
IGTD+RT+FT+ S+ L+KA G E++LLNPI +H K +GKPFYAI+HRV ++ID EP
Sbjct: 2 IGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEP 61
Query: 201 ARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRF 260
+ + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+F
Sbjct: 62 VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKF 121
Query: 261 HEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDE 320
HED+HGEV+AE + LEPY GLHYPATDIPQA+RFL +N+VRMIVDCHA + V+QDE
Sbjct: 122 HEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLVMKNKVRMIVDCHAKHVKVLQDE 181
Query: 321 GLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-----EAVGGRSTTRL 375
L L L GSTLRAPH CH QYMANM SIASL +AV++N +DE +AV + RL
Sbjct: 182 KLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKKKRL 241
Query: 376 WA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 409
W F + +N E++L Q+ EK++LRTQTLLCDML+
Sbjct: 242 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCDMLM 301
Query: 410 RDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGL 469
RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E QI++I W+ YH DSTGL
Sbjct: 302 RDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGSTPSEPQIREIALWMSEYHTDSTGL 361
Query: 470 STDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 529
STDSL+DAG+P A L D VCGMA IT +D +FWFRSHTA EI+WGGAKH P ++DDG
Sbjct: 362 STDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQDDG 421
Query: 530 QRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQL 587
++MHPRSSFKAFLEVVK+RS+PW + EMDAIHSLQLILR++ +D + NSKA +N +L
Sbjct: 422 RKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKA-INTRL 480
Query: 588 VDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKS 647
DL+++G+ EL +V EMVRLIETAT PI AVDV G VNGWN K++ELTGL V EA+GK
Sbjct: 481 NDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIGKH 540
Query: 648 LVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTN 707
L+ LV +IV +L+ AL+G+E+KNV+ +++T G++ + ++VNAC+S+D
Sbjct: 541 LL-TLVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDSGPISLIVNACASRDLHE 599
Query: 708 NIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAME 767
N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PN LIPPIF +DE C EWN AM
Sbjct: 600 NVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAMI 659
Query: 768 KLTGWSRGDIIGKMLVGEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFD 824
K+TGW R +++ KML+GEVFG SCCRLK +A F I L+ A G +TEK PF
Sbjct: 660 KITGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFLS 719
Query: 825 RNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYI 884
R GKYV+ LL+ +K+++ EG + G FCFLQ+ASPELQQAL +QR E+ RLK L Y+
Sbjct: 720 RKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTYM 779
Query: 885 CQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEF 944
++I+NPLSG+ F++ +LE T+L +QK+++ TS+ C++Q+ KI+ D DL+SI DG L+
Sbjct: 780 RRQIRNPLSGIVFSSKMLENTELGTEQKRIVNTSSQCQRQLSKILDDSDLDSIIDGYLDL 839
Query: 945 EKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNM 1004
E AEF L V+ +SQVM R+++++ D+ E I +YGD R+QQVLADFLL
Sbjct: 840 EMAEFTLHEVLVTSLSQVMNRSNTRSIRIVNDVAEHIAMETLYGDSLRLQQVLADFLLIS 899
Query: 1005 VRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQE 1064
+ +P+ G V I T +Q + +V+ E + G G+ ++ MF ++ ++E
Sbjct: 900 INSTPNG-GQVVIAATLTKEQLGKSVHLVNLELSITHGGNGVAEAVLNQMFGNNGLESEE 958
Query: 1065 GLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRR 1104
G+ L + RK+LKLMNG+V+Y++E+ + F++ EL ++
Sbjct: 959 GISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAQK 998
>gi|130181|sp|P06593.3|PHYA3_AVESA RecName: Full=Phytochrome A type 3; Short=AP3
gi|16111|emb|CAA26999.1| unnamed protein product [Avena sativa]
Length = 1129
Score = 1059 bits (2739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/1107 (49%), Positives = 736/1107 (66%), Gaps = 52/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRG 93
++ +AQ T+DA L+A +E ESG SFDYS+ V P QQ + AYL IQ+G
Sbjct: 20 ARVLAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKG 76
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQ FGC +A+DE +F VIA+SENA EML +VP+++ L IGT+VR+LF+
Sbjct: 77 KLIQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQG 136
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAG 212
+ L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AG
Sbjct: 137 ATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAG 195
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS++QSLPGG +++LC+TVV+ V LTGYDRVM Y+FHED+HGEV +E
Sbjct: 196 ALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEI 255
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P LEPY GLHYPATDIPQA+R LF +N+VRMI DC A + VI+ E L + L GS
Sbjct: 256 TKPGLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSA 315
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDE-------EAVGGRSTTRLWA-------- 377
LRAPH CH QYM NM SIASL +AV++N N+E + + +LW
Sbjct: 316 LRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHES 375
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVT 418
F + +N E +L QL EK++L+ QT+L DML R+ SP IV+
Sbjct: 376 PRYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVS 435
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
+P+IMDLVKCDGAAL Y GK + L PTE+QI DI WL H DSTGLSTDSL DAG
Sbjct: 436 GTPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAG 495
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA LGD +CGMAVA I +D LFWFRSHTA EI+WGGAK+ P D DD +RMHPR SF
Sbjct: 496 YPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSF 555
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK +SLPW + EMDAIHSLQLILR + DA +A ++ Q+ DL+L G+ EL
Sbjct: 556 KAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAEL 615
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV
Sbjct: 616 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEDSSV 674
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
+V +L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV QD
Sbjct: 675 PVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 734
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
+T KLVMDKF ++GDYKAI+H+PNPLIPPIF +DE CSEWN AM KLTGW+R +++
Sbjct: 735 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVL 794
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLT 835
KML+GEVF S C LK DA + +++A G++TEK PF FDR+GKY++ LL+
Sbjct: 795 DKMLLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLS 854
Query: 836 ANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGV 895
AN++ N G I G FCF+ +AS ELQ AL VQ+ E+ RLK +Y+ I NPLSG+
Sbjct: 855 ANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGM 914
Query: 896 SFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGS 953
++ L+ TDL E+Q + + C Q+ KI+ D+D +SI + S L+ E AEFLL
Sbjct: 915 LYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSCLDLEMAEFLLQD 974
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
V+ A VSQV++ + + +++ ++PE +VYGD R+QQ+L+DFL V++SP G
Sbjct: 975 VVVAAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPVG-G 1033
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCR 1072
VEI + T E ++ E R+ G G+P EL+ MF ++ ++EGL L + R
Sbjct: 1034 SVEISSKLTKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDNKEQSEEGLSLLVSR 1093
Query: 1073 KILKLMNGEVQYIRESERCYFLIIFEL 1099
+L+LMNG+V+++RE+ F+I EL
Sbjct: 1094 NLLRLMNGDVRHLREAGVSTFIITAEL 1120
>gi|218683913|gb|ACL00911.1| phytochrome D [Pachycladon stellatum]
Length = 651
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/652 (78%), Positives = 555/652 (85%), Gaps = 31/652 (4%)
Query: 185 AILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVE 244
AILHRVDVGIV DLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVE
Sbjct: 1 AILHRVDVGIVTDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVE 60
Query: 245 SVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVR 304
SVR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVR
Sbjct: 61 SVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVR 120
Query: 305 MIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE 364
+IVDCHA+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYMANM SIASLA+AVIING++E
Sbjct: 121 IIVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVIINGSEE 180
Query: 365 EA----VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSE 394
+ GGR++ RLW AFGLQLNMELQLA Q+SE
Sbjct: 181 DGNSVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSE 240
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
K VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYYPLGV PTE QI D
Sbjct: 241 KRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQIND 300
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
IV+WLL H DSTGLSTDSL DA YP A LGDAVCGMAVAYITKRDFLFWFRSHT KEI
Sbjct: 301 IVKWLLANHSDSTGLSTDSLGDASYPGTAALGDAVCGMAVAYITKRDFLFWFRSHTEKEI 360
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++
Sbjct: 361 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKES 420
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
EA+ + AV D+ QG+ E+ +VAREMVRLIETAT PIFAVD GC+NGWNAK+AE
Sbjct: 421 EAAAAGAV-QTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVDFDGCINGWNAKIAE 479
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSVEEAMGKSLV DL+YKEYEE VD LL ALKG+E K+VE+KL+ FG E + KAVF
Sbjct: 480 LTGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKDVEVKLKIFGPELQGKAVF 539
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VV+NACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+D
Sbjct: 540 VVINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAAD 599
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
ENTCC EWNTAMEKLTGW R ++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 600 ENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 651
>gi|130182|sp|P06594.3|PHYA4_AVESA RecName: Full=Phytochrome A type 4; Short=AP4
gi|16113|emb|CAA27000.1| unnamed protein product [Avena sativa]
Length = 1129
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/1104 (49%), Positives = 731/1104 (66%), Gaps = 52/1104 (4%)
Query: 42 IAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRGGHI 96
+AQ T+DA L+A +E ESG SFDYS+ V P QQ + AYL IQ+G I
Sbjct: 23 LAQTTLDAELNAEYE---ESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKLI 79
Query: 97 QPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVL 156
Q FGC +A+DE +F VIA+SENA EML +VP+++ L IGT+VR+LF+ +
Sbjct: 80 QTFGCMLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATA 139
Query: 157 LEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQ 215
L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AGA+Q
Sbjct: 140 LHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAGALQ 198
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AIS++QSLPGG +++LC+TVV+ V LTGYDRVM Y+FHED+HGEV AE +P
Sbjct: 199 SYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEITKP 258
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + VI+ E L + L GS LRA
Sbjct: 259 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRA 318
Query: 336 PHGCHAQYMANMGSIASLALAVII-------NGNDEEAVGGRSTTRLWA----------- 377
PH CH QYM NM SIASL +AV++ E+ + +LW
Sbjct: 319 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQQKKKLWGLLVCHHESPRY 378
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSP 421
F + +N E +L QL EK +L+ QT+L DML R+ SP IV+ +P
Sbjct: 379 VPFPLRYACEFLAQVFAVHVNREFELEKQLREKSILKMQTMLSDMLFREASPLTIVSGAP 438
Query: 422 SIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPK 481
+IMDLVKCDGAAL Y GK + L PTE+QI DI WL H DSTGLSTDSL DAGYP
Sbjct: 439 NIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPG 498
Query: 482 AATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 541
A+ LGD +CGMAVA I +D +FWFRSHTA EI+WGGAKH D DD +RMHPR SFKAF
Sbjct: 499 ASALGDMICGMAVAKINSKDIIFWFRSHTAAEIRWGGAKHDSSDMDDSRRMHPRLSFKAF 558
Query: 542 LEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSV 601
LEVVK +SLPW + EMDAIHSLQLILR + DA +A ++ Q+ DL+L G+ EL +V
Sbjct: 559 LEVVKMKSLPWTDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAV 618
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV + +V
Sbjct: 619 TSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSVPVV 677
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L+ AL+G+E+K V +++T G V +VVNAC+S+D +++VGVCFV QD+T
Sbjct: 678 QRMLYLALQGKEEKEVRFEVKTHGPRRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 737
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
KLVMDKF ++GDYKAI+H+PNPLIPPIF +DE CSEWN AM KLTGW+R +++ KM
Sbjct: 738 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKM 797
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVF S C LK +A + +++A G++TEK PF FDR+GKY++ LL+AN+
Sbjct: 798 LLGEVFDSSNASCPLKNKNAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANR 857
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+ N G I G FCF+ +AS ELQ AL VQ+ E+ RLK +Y+ I NPLSG+ ++
Sbjct: 858 KENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYS 917
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVIN 956
L+ TDL E+Q + + C Q+ KI+ D+D +SI + S L+ E AEF+ V+
Sbjct: 918 RKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSISEKSSCLDLEMAEFVFQDVVV 977
Query: 957 AVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVE 1016
A VSQV++ + + +++ ++PE +VYGD R+QQ+L+DFL V++SP G VE
Sbjct: 978 AAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPVG-GSVE 1036
Query: 1017 IHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCRKIL 1075
I + T E ++ E R+ G G+P EL++ MF ++ + EGLGL + RK+L
Sbjct: 1037 ISSKLTKNSIGENLHLIDLELRIKHQGLGVPAELMEQMFEEDNKEQSDEGLGLLVSRKLL 1096
Query: 1076 KLMNGEVQYIRESERCYFLIIFEL 1099
+LMNG+V+++RE+ F++ EL
Sbjct: 1097 RLMNGDVRHLREAGVSTFILTAEL 1120
>gi|357117591|ref|XP_003560548.1| PREDICTED: phytochrome A type 3-like [Brachypodium distachyon]
Length = 1131
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/1107 (48%), Positives = 740/1107 (66%), Gaps = 52/1107 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQ-----ISAYLSKIQRG 93
++ +AQ T+DA L+A +E E+G SF+YS+ V ++ PEQQ + AYL IQ+G
Sbjct: 22 ARILAQTTLDAELNAEYE---ETGDSFNYSKLVEAQRNTPPEQQGRSEKVIAYLQHIQKG 78
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQ FGC +A+DE +F VIA+S+NA EML + +VP+++ L IGT+VR+LFT
Sbjct: 79 KMIQSFGCLLALDEKSFNVIAFSQNAPEMLTMVSHAVPSVDDPPRLGIGTNVRSLFTDQG 138
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAG 212
+ L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP + TE PA + AG
Sbjct: 139 ATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPA-TAAG 197
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+QS KLA +AIS++QSLPGG +++LC+TVV+ V LTGYDRVM Y+FHED+HGEV AE
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEI 257
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+P LEPY GLHYPATDIPQA+RFLF +N+VRMI DC A + +++DE L + L GS
Sbjct: 258 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIVEDESLPFDISLCGSA 317
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGND-------EEAVGGRSTTRLWA-------- 377
LRAPH CH QYM NM SIASL +AV++N N+ E+ + +LW
Sbjct: 318 LRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEVEAEQPAQQQKKKKLWGLLVCHHES 377
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVT 418
F + +N E +L +QL EK +LR QT+L DML R+ SP I++
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELENQLREKSILRMQTILSDMLFREASPLTIIS 437
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
+P++MDLVKCDGAAL + K + L PTE+QI+DI WL H DSTGLST+SL DAG
Sbjct: 438 GTPNVMDLVKCDGAALLHGDKVWRLRDAPTESQIRDIASWLSEVHRDSTGLSTESLHDAG 497
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP A+ LGD +CGMAVA I RD LFWFRSHTA EIKWGGAKH P D DDG+RMHPR SF
Sbjct: 498 YPGASALGDMICGMAVAKINSRDILFWFRSHTAAEIKWGGAKHDPSDMDDGRRMHPRLSF 557
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK +SL W + EMDAIHSLQLILR + D + A ++ Q+ DL+L G+ EL
Sbjct: 558 KAFLEVVKMKSLSWSDYEMDAIHSLQLILRGALNDGIKATKGASLDNQIGDLKLDGLAEL 617
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
+V EMVRL+ETAT PI AVD +G +NGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 618 QAVTSEMVRLMETATVPILAVDGNGLINGWNQKAAELTGLRVDDAIGRHIL-TLVEESSV 676
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQD 718
+V +L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV QD
Sbjct: 677 PVVQRMLYLALQGKEEKEVRFEVKTHGPKREDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 719 VTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDII 778
+T KLVMDKF I+GDYKAI+H+PNPLIPPIF +DE CSEWNTAM LTGW R +++
Sbjct: 737 MTVHKLVMDKFTRIEGDYKAIIHNPNPLIPPIFGTDEFGWCSEWNTAMTMLTGWHRDEVV 796
Query: 779 GKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLT 835
KML+GEVF S C LK DA + +++A G++T+K PF FDRNGKY++ LL+
Sbjct: 797 DKMLLGEVFDSSSASCLLKNKDAFISLCVLINSALAGEETDKAPFGFFDRNGKYIECLLS 856
Query: 836 ANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGV 895
AN++ N G I G FCF+Q+AS ELQ AL VQ+ E+ +LK +Y+ I NPLSG+
Sbjct: 857 ANRKENAGGLITGVFCFIQVASHELQHALHVQQASEQTSLRKLKAFSYMRHAINNPLSGM 916
Query: 896 SFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGS 953
++ L+ TDL E+Q + + + C Q+ KI+ D+D ++I + S L+ E EF+L
Sbjct: 917 LYSRKALKNTDLNEEQMKQIHVADNCHHQLNKILADLDQDNITEKSSCLDLEMVEFVLQD 976
Query: 954 VINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEG 1013
V+ A VSQV++ + + +++ ++PE +VYGD R+QQ+L+DFL V++SP G
Sbjct: 977 VVVAAVSQVLIACQGKGIRVSCNLPERFMKQSVYGDGIRLQQILSDFLFVSVKFSPVG-G 1035
Query: 1014 WVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCR 1072
VEI + T K + ++ E R+ G G+P EL+ MF + ++EG L + R
Sbjct: 1036 SVEISSKLTKKSIGDNLHLIDLELRIKHQGLGVPAELMAQMFEEDNTQQSEEGQSLLVSR 1095
Query: 1073 KILKLMNGEVQYIRESERCYFLIIFEL 1099
+L+LMNG+V ++RE+ F++ EL
Sbjct: 1096 NLLRLMNGDVHHLREAGVSTFILTMEL 1122
>gi|327342186|gb|AEA50880.1| phyA [Populus tremula]
Length = 958
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/940 (54%), Positives = 676/940 (71%), Gaps = 39/940 (4%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVP---EQQISAYLSKIQRGGH 95
++ IAQ TVDA+LHA FE+SG S + ++ P ++ +AYL IQ+G
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +A+DE TFRV+AYSENA E+L + +VP++ + +L IGTD+RT+FT+ S+
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
L+KA G +++LLNPI +H K +GKPFYAI+HRV ++ID EP + + ++ AGA+Q
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
S KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDR M Y+FH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+EPY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDE-----EAVGGRSTTRLWA------------- 377
PH CH QYM NM SIASL +AV++N DE ++ + RLW
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 378 -------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIM 424
F + +N EL+L +Q+ EK++LRTQTLLCDML+RD+P GIVTQSP+IM
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 425 DLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAAT 484
DLVKCDGA L+Y+ K + LG+TP++ Q++DI WL YH DSTGLSTDSL DAGYP A
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 485 LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 544
LGD VCGMA IT +D LFWFRS TA EI+WGGAKH P +KDDG+RMHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 545 VKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSVAR 603
VK+RSLPW + EMDAIHSLQLILR++F+D E + ++A+L DL+++G+ EL +V
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRLIETAT PI AVDV G VNGWN K++ELTGL V++A+GK L+ LV +IV
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLL-TLVEDSSVDIVKR 678
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L AL+G+E++N++ +++T G+++ + +VVNAC+S+D N+VGVCFVGQD+T QK
Sbjct: 679 MLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQK 738
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
+VMDKF I+GDYKAIV + NPLIPPIF +DE CSEWN AM LTGW R +++ KML+
Sbjct: 739 MVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLL 798
Query: 784 GEVFG---SCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRV 840
GEVFG +CCRLK +A + L+ A GQ++EK F F R GKYV+ LL +K++
Sbjct: 799 GEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKL 858
Query: 841 NMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNS 900
+ EG + G FCFLQ+AS ELQQAL VQR E+ RLK LAY+ ++I NPLSG+ F+
Sbjct: 859 DREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGK 918
Query: 901 LLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDG 940
++E T+L +QK+LL TSA C+ Q+ KI+ D DL+SI +G
Sbjct: 919 MMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEG 958
>gi|218683939|gb|ACL00923.1| phytochrome D [Pachycladon novaezelandiae]
Length = 650
Score = 1053 bits (2723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/651 (78%), Positives = 554/651 (85%), Gaps = 31/651 (4%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVR+
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRI 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHA+P+ V+QD+ L Q +CLVGSTLRAPHGCHAQYMANM SIASLA+AVIING++E+
Sbjct: 121 IVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVIINGSEED 180
Query: 366 A----VGGRSTTRLW--------------------------AFGLQLNMELQLASQLSEK 395
GGR++ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GNCVNTGGRNSMRLWGLVVCHHTSARGIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 396 HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 455
VLR QTLLCDMLLRDSPAGIVTQ PSIMDLVKC+GAA YQGKYYPLGV PTE QI DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDI 300
Query: 456 VEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 515
V+WLL H DSTGLSTDSL DA YP A LGDAVCGMAVAYITKRDFLFWFRSHT KEIK
Sbjct: 301 VKWLLANHSDSTGLSTDSLGDASYPGTAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 516 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
WGGAKHHPEDKDDGQRMHPRSSF+AFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++E
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 576 ASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAEL 635
A+ + AV D+ QG+ E+ +VAREMVRLIETAT PIFAVD GC+NGWNAK+AEL
Sbjct: 421 AAAAGAV-QTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVDFDGCINGWNAKIAEL 479
Query: 636 TGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFV 695
TGLSVEEAMGKSLV DL+YKEYEE VD LL ALKG+E K+VE+KL+ FG E + KAVFV
Sbjct: 480 TGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKDVEVKLKIFGPELQGKAVFV 539
Query: 696 VVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDE 755
V+NACSSKDY NNIVGVCFVGQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DE
Sbjct: 540 VINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADE 599
Query: 756 NTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
NTCC EWNTAMEKLTGW R ++IGK+LV EVFGSC RLKGPDALTKFMI L
Sbjct: 600 NTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCRRLKGPDALTKFMIVL 650
>gi|218683871|gb|ACL00890.1| phytochrome B [Aethionema oppositifolium]
Length = 634
Score = 1053 bits (2723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/635 (80%), Positives = 549/635 (86%), Gaps = 35/635 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAES+R DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+ V+QD+ L Q
Sbjct: 61 GEVVAESRRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
+CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+++ GGR++ RLW
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVAGGRNSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SEK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGAA Y GKYYPLGV PTE QIKD+VEWLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEVQIKDVVEWLLANHADSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS-NSK----AVVNAQLVDLE 591
SFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA+ NS+ AV + V E
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSRTADGAVQPCRDVGGE 420
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
QG+DEL +VAREMVRLIETAT PIFAVD GCVNGWNAK+AELTGLSVEEAMGKSLV D
Sbjct: 421 -QGIDELGAVAREMVRLIETATVPIFAVDAGGCVNGWNAKIAELTGLSVEEAMGKSLVSD 479
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
L+YKE EE VD L+ AL+G+EDKNVE+KL+TF E KAVFVVVNACSSKDY NNIVG
Sbjct: 480 LIYKENEETVDKLISRALRGDEDKNVEVKLKTFSPEPEGKAVFVVVNACSSKDYLNNIVG 539
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+DENTCC EWNTAMEKLTG
Sbjct: 540 VCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTG 599
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
WSRG+ IGKMLVGEVFGSCC+LKGPDALTKFMI L
Sbjct: 600 WSRGEAIGKMLVGEVFGSCCKLKGPDALTKFMIVL 634
>gi|218683859|gb|ACL00884.1| phytochrome B [Camelina microcarpa]
Length = 634
Score = 1052 bits (2720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/634 (80%), Positives = 547/634 (86%), Gaps = 33/634 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+ V+QD+ L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
+CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGNDE+ GRS+ RLW
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNDEDGSNVASGRSSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SE+ VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEERVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QI+D+VEWLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEAQIRDVVEWLLANHADSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS-NSKAVVNAQLVDLEL--- 592
SFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA+ NSK V A ++
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTVDGAVQPYKDMSGE 420
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV DL
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
+YKE EE V LL AL+G+E+KNVE+KL+TF +E + KAVFVVVNACSSKDY NNIVGV
Sbjct: 481 IYKENEETVSKLLSRALRGDEEKNVEVKLKTFSSELQGKAVFVVVNACSSKDYLNNIVGV 540
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFV QDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+DENTCC EWNTAMEKLTGW
Sbjct: 541 CFVAQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGW 600
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
SR ++IGKMLVGEVFGSCCRLKGPDALTKFMI L
Sbjct: 601 SRSEVIGKMLVGEVFGSCCRLKGPDALTKFMIVL 634
>gi|227452669|dbj|BAH57345.1| phytochrome A [Glycine max]
Length = 1094
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/1053 (50%), Positives = 727/1053 (69%), Gaps = 53/1053 (5%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKS-----FDYSQSVRTMSHSVPEQQISAYLSKIQRG 93
++ +AQ T+DA+LHA FE+SG S + +V ++ S+YL + Q+
Sbjct: 24 ARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQTQKI 83
Query: 94 GHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSS 153
IQPFGC +A+DE T +VIAYSENA EML + +VP++ L IGTD+RT+FT+ S
Sbjct: 84 KLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIFTAPS 143
Query: 154 SVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGA 213
S ++KA +++L NPI +H K +GKPFYAI+HRV ++ID EP + + ++ +GA
Sbjct: 144 SAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMTASGA 203
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
+QS KLA +AI++L+SL G+++ LC+T+V V +LTGYDRVM Y+FHED+HGEV+AE K
Sbjct: 204 LQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVIAEVK 263
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
RP LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC A + V+QD+ + L L GSTL
Sbjct: 264 RPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLCGSTL 323
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGNDE-----EAVGGRSTTRLWA----------- 377
RA H CH QYM NM S ASL +AV++N NDE +AV + + RLW
Sbjct: 324 RAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHTTPRF 383
Query: 378 ---------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPS 422
F + ++ EL++ Q+ EK++L+TQTLLCDML++ P GIV+QSP+
Sbjct: 384 VPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVSQSPN 443
Query: 423 IMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKA 482
IMDLVKCDGAAL Y+ K + LGVTP+E+QIK+I WL H DSTG TDSL+DAG+P A
Sbjct: 444 IMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAGFPGA 503
Query: 483 ATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 542
A LGD CGMA A I +D LFWFRSHTA EI+WGGAKH P ++DDG+R+HPRSSFKAFL
Sbjct: 504 AALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSFKAFL 563
Query: 543 EVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGVDELSSV 601
EVVK+RSLPW E DAIHSLQLILRD+F++ ++ S ++ +L DL+++G+ EL +V
Sbjct: 564 EVVKTRSLPWKTYETDAIHSLQLILRDAFKETQSMEISTYAIDTRLGDLKIEGMQELDAV 623
Query: 602 AREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIV 661
E+VRLIETAT PI AVDV+G +NGWN K+AELTGL V+EA+GK L+ LV + V
Sbjct: 624 TSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLL-TLVEDFSVDRV 682
Query: 662 DNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTD 721
+L AL+GEE++NV+ +++T + + +VVNAC+S+D +N+VGVCF+ QD+T
Sbjct: 683 KKMLDMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCFLAQDITA 742
Query: 722 QKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKM 781
QK +MDKF I+GDYKAIV +PNPLIPPIF +DE C EWN+AM KLTGW R +++ KM
Sbjct: 743 QKTMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKREEVMDKM 802
Query: 782 LVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANK 838
L+GEVFG+ CCRL+ +A+ F I L+ A G +TEK PF F R+GK+V+ +L+ K
Sbjct: 803 LLGEVFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVECILSMTK 862
Query: 839 RVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFT 898
+++ EG + G FCFLQ+AS ELQQAL +QR E+ RLK+L Y+ ++I+NPL G+ F+
Sbjct: 863 KLDAEGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNPLYGIMFS 922
Query: 899 NSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAV 958
LLE T+L +QKQ L+T C++Q+ KI+ D DL+SI DG ++ E EF L V+ A
Sbjct: 923 RKLLEGTELGAEQKQFLQTGIRCQRQISKILDDSDLDSIIDGYMDLEMVEFTLHEVLVAS 982
Query: 959 VSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIH 1018
+SQVM + ++++ D+ E+I T +YGD R+QQVLADFLL + ++P+ ++
Sbjct: 983 LSQVMTKSNAKGIRVVNDVEEKITTETLYGDSIRLQQVLADFLLISINFTPTGG---QVV 1039
Query: 1019 VRPTLKQSSEGQTI--VHNEFR-------MVCP 1042
V TL Q G+ + + EFR ++CP
Sbjct: 1040 VAATLTQQQLGKLVHLANLEFRTLIASGVLICP 1072
>gi|218683891|gb|ACL00900.1| phytochrome B [Sisymbrium altissimum]
Length = 633
Score = 1047 bits (2708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/633 (79%), Positives = 546/633 (86%), Gaps = 32/633 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAES+R DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+ V+QD+ L Q
Sbjct: 61 GEVVAESRREDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAV---GGRSTTRLW------ 376
+CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+++ GGRS+ RLW
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGTNVAGGRSSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA ++SEK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALRMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKC+GAA Y GKYYPLGV PTE QIK+IVEWLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCNGAAFLYHGKYYPLGVAPTEAQIKEIVEWLLANHADSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYITK+DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLEL---Q 593
SFKAFL VVKSRS PW+ AEMDAIHSLQLILRDSF+++EA+ + + + L + Q
Sbjct: 361 SFKAFLGVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAVQPLGMAGEQ 420
Query: 594 GVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLV 653
G+DEL +VAR MVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV DL+
Sbjct: 421 GIDELGAVARGMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLI 480
Query: 654 YKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVC 713
YKE EE VD L+ AL+G+EDKNVEIKL+TF E + KAVFVVVNACSSKDY+NNIVGVC
Sbjct: 481 YKENEETVDKLIARALRGDEDKNVEIKLKTFTPELQGKAVFVVVNACSSKDYSNNIVGVC 540
Query: 714 FVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWS 773
FVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+DENTCC EWNTAMEKLTGWS
Sbjct: 541 FVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWS 600
Query: 774 RGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
R ++IGKMLVGEVFGSCCRLKGPDALTKFMI L
Sbjct: 601 RSEVIGKMLVGEVFGSCCRLKGPDALTKFMIVL 633
>gi|218683887|gb|ACL00898.1| phytochrome B [Thlaspi perfoliatum]
Length = 634
Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/634 (80%), Positives = 544/634 (85%), Gaps = 33/634 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAES R DLEPY GLHYPATDIPQA RFLFKQNRVRMIVDCHATP+ V+QD+ L Q
Sbjct: 61 GEVVAESGRDDLEPYIGLHYPATDIPQAPRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
+CLVGSTLRAPHGCH+QYMANMGSIASL +AVIINGN+++ GGR++ RLW
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLTMAVIINGNEDDGSNVAGGRNSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SEK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGAA Y GKYYPLGV PTE QIKD+VEWLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEVQIKDVVEWLLANHADSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS-NSKAVVNAQLVDLEL--- 592
SFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA+ NSK A ++
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAVQPCRDMAGE 420
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV DL
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
+YKE EE VD L+ AL G+EDKNVE+KL+TF E R KAVFVVVNACSSKDY NNIVGV
Sbjct: 481 IYKENEETVDKLISRALGGDEDKNVEVKLKTFSPELRGKAVFVVVNACSSKDYLNNIVGV 540
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+DENT C EWNTAME+LTGW
Sbjct: 541 CFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTSCLEWNTAMERLTGW 600
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
SRG++IGKMLVGEVFGSCCRLKGPDALTKFMI L
Sbjct: 601 SRGEVIGKMLVGEVFGSCCRLKGPDALTKFMIVL 634
>gi|218683925|gb|ACL00916.1| phytochrome D [Farsetia aegyptia]
Length = 632
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/632 (79%), Positives = 546/632 (86%), Gaps = 31/632 (4%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+P+ VIQD+ L QP
Sbjct: 61 GEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVIQDDRLTQP 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW-------- 376
+CLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGN+E+ + GR++ RLW
Sbjct: 121 MCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGITVGRNSMRLWGLVVCHHT 180
Query: 377 ------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVT
Sbjct: 181 SARSIPFPLRYACEFLMQAFGLQLNMELQLAQQVSEKRVLRMQTLLCDMLLRDSPAGIVT 240
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSP+IMDLVKC+GAA Y+GKYYPLGV P+ETQIKDIVEWLL H DSTGLSTDSL DAG
Sbjct: 241 QSPNIMDLVKCNGAAFLYRGKYYPLGVAPSETQIKDIVEWLLANHSDSTGLSTDSLGDAG 300
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA LGDAVCGMAVAYITK+DFLFWFRSH+ KEIKWGGAKHHPE+KDDGQRMHPRSSF
Sbjct: 301 YPHAAALGDAVCGMAVAYITKKDFLFWFRSHSEKEIKWGGAKHHPENKDDGQRMHPRSSF 360
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV----VNAQLVDLELQG 594
KAFLEVVKSR PW+ AEMDAIHSLQLILRDSF+D+EA +SKA + Q D+ G
Sbjct: 361 KAFLEVVKSRCQPWEAAEMDAIHSLQLILRDSFKDSEAMDSKAAAAGAIQPQGEDMAEHG 420
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
++E+ +VAREMVRLIETAT PIFAVD+ GC+NGWNAK+AELTGLSVEEAMGKSLV DL+Y
Sbjct: 421 IEEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRDLIY 480
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCF 714
EYEE VD LL AL+G+E +NVEIKL+TFG E + KAVFVVVNACSSKDY NNIVGVCF
Sbjct: 481 SEYEETVDRLLSCALQGDEGRNVEIKLKTFGPEQQGKAVFVVVNACSSKDYLNNIVGVCF 540
Query: 715 VGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSR 774
VGQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENTCC EWNTAME+ TGW R
Sbjct: 541 VGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEQRTGWPR 600
Query: 775 GDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
++IGK+LVGEVFGSCCRLKGPDALTKFMI L
Sbjct: 601 SEVIGKLLVGEVFGSCCRLKGPDALTKFMIVL 632
>gi|371940268|dbj|BAL45571.1| truncate phytochrome A2 protein [Glycine max]
Length = 979
Score = 1042 bits (2695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/935 (54%), Positives = 672/935 (71%), Gaps = 40/935 (4%)
Query: 41 AIAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQ 97
A+A TVDA+LHA FE+SG S S + ++ ++ +AYL +Q+G IQ
Sbjct: 22 AMALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S+ L
Sbjct: 82 PFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
+KA G E+ LLNP+ IH K +GKPFYAI+HRV ++ID EP + + ++ AGA+QS
Sbjct: 142 QKALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P L
Sbjct: 202 KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA---------------- 377
CHAQYMANM SIASL +AV++N N+E +A+ + RLW
Sbjct: 322 SCHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPL 381
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F + +N E++L Q+ EK++LRTQTLLCD+++RD+P GIV++SP+IMDLV
Sbjct: 382 RYACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLV 441
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAAL Y+ K + LGVTP+E+QI++I WL YH DSTG STDSL+DAG+P A +LGD
Sbjct: 442 KCDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGD 501
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDDG+RMHPRSSFK FL+VVK+
Sbjct: 502 VVCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKA 561
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDLELQGVDELSSVAREM 605
RSLPW E+DA+HSLQLILR++F+D E+ N+KA +N +L DL+++G+ EL +V E+
Sbjct: 562 RSLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKA-INTRLSDLKIEGMQELEAVTSEI 620
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETAT PI AVDV G VNGWN K+AELTGL V EAMGK L+ LV + V +L
Sbjct: 621 VRLIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKML 679
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
+ AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV D+T QK V
Sbjct: 680 NLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNV 739
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDKF I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW R +++ KML+GE
Sbjct: 740 MDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGE 799
Query: 786 VFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
+FG+ CRLK +A + L+ A G +TEK PF F RNGKYV+ LL+ +K++++
Sbjct: 800 LFGTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDV 859
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLL 902
EG + G FCFLQ+ASPELQQAL +QR E+ RL L+Y+ ++I+NPL G+ F+ +L
Sbjct: 860 EGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKML 919
Query: 903 EATDLTEDQKQLLETSAACEKQMLKIIKDVDLESI 937
E T L +QKQLL TSA C++Q+ KI+ D DL+SI
Sbjct: 920 EGTALGTEQKQLLRTSAQCQQQLSKILDDSDLDSI 954
>gi|218683889|gb|ACL00899.1| phytochrome B [Thlaspi perfoliatum]
Length = 634
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/634 (79%), Positives = 543/634 (85%), Gaps = 33/634 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAES+R DLEPY GLHYPATDIPQASRFL KQNRVRMIVDCHATP+ V+QD+ L Q
Sbjct: 61 GEVVAESRRDDLEPYIGLHYPATDIPQASRFLSKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
+CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN ++ GGR++ RLW
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNKDDGSNVAGGRNSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SEK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGAA Y GKYYPLGV PTE QIKD+V WLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEVQIKDVVGWLLANHADSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS-NSKAVVNAQLVDLEL--- 592
SFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA+ NSK A ++
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAVQPCRDMAGE 420
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMG+SLV DL
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGRSLVSDL 480
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
+YKE EE VD L+ AL G+EDKNVE+KL+TF E + KAVFVVVNACSSKDY NNIVGV
Sbjct: 481 IYKENEETVDKLISRALGGDEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIVGV 540
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFVGQDVT QK+VMDKFI IQGDYKAIVHSPNPLIPPIFA+DENT C EWNTAMEKLTGW
Sbjct: 541 CFVGQDVTGQKIVMDKFISIQGDYKAIVHSPNPLIPPIFAADENTSCLEWNTAMEKLTGW 600
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
SRG++IGKMLVGEVFGSCCRLKGPDALTKFM+ L
Sbjct: 601 SRGEVIGKMLVGEVFGSCCRLKGPDALTKFMVVL 634
>gi|10639836|emb|CAC11136.1| phytochrome N [Pinus sylvestris]
Length = 876
Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/871 (58%), Positives = 646/871 (74%), Gaps = 37/871 (4%)
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
D+HGEV++E +R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC+A P+ VIQDE L
Sbjct: 1 DDHGEVISEMRRYDLEPYLGLHYPATDIPQASRFLFMRNRVRMICDCYAQPVAVIQDERL 60
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN----GNDEEAVGGRSTTRLWA- 377
+ L GSTLRAPHGCHAQYMANMGSIASL +AV+IN D E + RLW
Sbjct: 61 PRDLSFCGSTLRAPHGCHAQYMANMGSIASLVMAVVINEKELDGDSEGQMQQKGRRLWGL 120
Query: 378 -------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 412
FG+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+
Sbjct: 121 VVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKEVELAAQIREKQILRTQTLLCDMLLRDT 180
Query: 413 PAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTD 472
P GIVTQ P+IMDLV+CDGAALYY+ ++ LGVTPTE QI+DIV WL +H DSTGLSTD
Sbjct: 181 PLGIVTQKPNIMDLVRCDGAALYYERNFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTD 240
Query: 473 SLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 532
SL AGYP A +LG+AVCG+A I +DFLFWFRSHTAKEIKWGGAKH +++DDG++M
Sbjct: 241 SLVYAGYPGAESLGNAVCGIAAVRINSKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKM 300
Query: 533 HPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLEL 592
HPRSSF AFLEVVK RSL W++ EMDAIHSLQLILR S ++ + S +N QL DL+L
Sbjct: 301 HPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQLILRGSRKETDGSGRNISINRQLNDLKL 360
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
Q +DEL++V EMVRLIETATAPI AVD +G VNGWN K AELTGLSVEE +G+ L+ +L
Sbjct: 361 QEMDELNAVTNEMVRLIETATAPILAVDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NL 419
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
V + E V +LH AL+G E++NV+I+L+ G+E K V ++VNACSS+D N+VGV
Sbjct: 420 VEETSAENVKRMLHLALQGVEEQNVQIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGV 479
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFV QDVT QK+VMDKF IQGDY+AIV +P+PLIPPIF +DE C E N+AMEKL+GW
Sbjct: 480 CFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSPLIPPIFGTDECGCVPE-NSAMEKLSGW 538
Query: 773 SRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKY 829
R +II KML+GEVFG+ CCRLKG +ALT+ I L+++ GQ+TEKFPF FDR+GKY
Sbjct: 539 KREEIIDKMLLGEVFGTRTACCRLKGQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKY 598
Query: 830 VQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIK 889
V+ LL+ANK+++ EG+I G FCFL IASPELQQAL VQ E+ RL+ L Y+ EIK
Sbjct: 599 VETLLSANKKLDEEGKITGVFCFLHIASPELQQALYVQHMLEQAAMKRLQALTYLRLEIK 658
Query: 890 NPLSGVSFTNSLLEATD-LTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAE 948
NPL G+ FT ++E TD L EDQ+QL+ETSA C+KQ+LKI+ D+DLESIED L+ + E
Sbjct: 659 NPLYGIMFTQKMMERTDFLREDQRQLVETSALCQKQILKILDDMDLESIEDRYLDLDTVE 718
Query: 949 FLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYS 1008
F LG++++AV+SQ M+ E+ L++ D+P EI T +YGDQ+R+QQ+LA+FL+ +++++
Sbjct: 719 FTLGALLDAVISQGMIQSEEKGLEIGYDLPREITTTGLYGDQSRLQQILANFLVTVIQFT 778
Query: 1009 PSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGL 1068
P AE WV I V PT + G ++ EFR+ PG GLP +LVQ MF+ M+QEG GL
Sbjct: 779 P-AEKWVRIKVSPTKRHLGGGVYVIGIEFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGL 837
Query: 1069 SMCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+CRK+++LMNG+VQY+R F+I+ EL
Sbjct: 838 LICRKLVRLMNGDVQYLRGGGTSSFVIVVEL 868
>gi|327241204|gb|AEA40446.1| phytochrome A type 3 [Triticum aestivum]
Length = 1130
Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/1110 (49%), Positives = 732/1110 (65%), Gaps = 53/1110 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR------TMSHSVPEQQISAYLSKI 90
T + +AQ T+DA+L+A FE ES SFDYS+ V T+ +++ AYL I
Sbjct: 18 TQERVLAQTTLDAQLNAEFE---ESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRG IQ FGC +A+DE +F VIA+SENA EML +VP+++ L IGT+VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALS 209
+ L KA G +++LLNPI + K++GKPFYAI+HR +V+D EP TE PA +
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKSSGKPFYAIVHRATGCLVVDFEPVNPTEFPA-T 193
Query: 210 IAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVV 269
AGA+QS KLA +AIS++Q+LPGG ++LLC+TVV+ V +LTGYDRVM Y+FHED HGEV
Sbjct: 194 AAGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVF 253
Query: 270 AESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLV 329
AE +P LEPY GLHYPATDIPQA+RFLF +N+VRMI D A + VI+DE L + L
Sbjct: 254 AEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSIKVIEDEALPFDISLC 313
Query: 330 GSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-EAVGGRSTTR------LWA----- 377
GS LRA H CH QYM NM SIASL +AV++N N+E + VG + LW
Sbjct: 314 GSALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCH 373
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAG 415
F + +N E ++ QL EK +LR QT+L DML ++ SP
Sbjct: 374 HESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLT 433
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IV+ +P+IMDL+KCDGAAL Y GK + LG PTE+QI+D+ WL H DSTGLST+SL
Sbjct: 434 IVSGAPNIMDLIKCDGAALLYGGKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLH 493
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A+ LGD VCGMAVA I D LFWFRSHTAKEI+WGGAK+ P D+DD +RMHPR
Sbjct: 494 DAGYPGASALGDMVCGMAVAKINSNDILFWFRSHTAKEIRWGGAKNDPSDQDDSRRMHPR 553
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SFKAFLEVVK +SL W ++EMDAIHSLQLILR + KA ++ Q+ DL+L G+
Sbjct: 554 LSFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 614 AELQTVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+V +L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV
Sbjct: 673 SSVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFV 732
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QD+T KLVMDKF ++GDYKAI+H+PNPLIPPIF +DE C EWN AM KLTGW +
Sbjct: 733 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHKE 792
Query: 776 DIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
+++ KML+GEVF S C LK DA +++A G++TEK PF FDR+GKY +
Sbjct: 793 EVLDKMLLGEVFDSRNASCLLKNKDAFVSLCAVINSALAGKETEKAPFGFFDRSGKYTEC 852
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPL 892
LL+ N+R N +G I G FCF+ I S ELQQAL VQ+ E+ RLK +Y+ I NPL
Sbjct: 853 LLSVNRRQNEDGLITGVFCFIHIPSHELQQALQVQQASEQASLKRLKAFSYMRHAINNPL 912
Query: 893 SGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFL 950
SG+ ++ L+ TDL E+Q + + S C Q+ KI+ D+D + I + S L+ E AEF+
Sbjct: 913 SGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDGIMEKSSCLDLEMAEFV 972
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L V+ A VSQV++ + +++ ++PE +YGD R+QQ+L+DFL V++SP
Sbjct: 973 LQDVVVAAVSQVLIACEGKGIRVSCNLPERFMKKLIYGDGVRLQQILSDFLSISVKFSPV 1032
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRW-MTQEGLGLS 1069
G +EI + T E ++ + R+ G G+P EL+ MF ++EGLGL
Sbjct: 1033 G-GSIEISAKATKNSIGENLHLIDLDLRIKHHGLGVPAELMAQMFEEDDMQQSEEGLGLL 1091
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ R +L+LMNG+V+++RE+ F++ EL
Sbjct: 1092 VSRNLLRLMNGDVRHLREAGMSIFILTAEL 1121
>gi|218683853|gb|ACL00881.1| phytochrome B [Boechera laevigata]
Length = 634
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/634 (79%), Positives = 541/634 (85%), Gaps = 33/634 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLA+RAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAIRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+ V+QD+ L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLAQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
+CLVGSTLRAPHGCH+QYMANMGSIAS+A+AVIINGN+E+ GRS+ RLW
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASIAMAVIINGNEEDGSNVASGRSSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SEK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QIKDIVEWLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDIVEWLLANHADSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYIT+RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITERDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS-NSK---AVVNAQLVDLEL 592
SFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA+ NSK VV
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTVDGVVQPYRDKAGE 420
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QG+DEL +VAREMVRLIETAT PIFAVD G +NGWNAK+AELTGLSVEEA+GKSLV DL
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDSGGRINGWNAKIAELTGLSVEEAVGKSLVSDL 480
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
+YKE EE V LL AL+G+EDKNVE+KL+T E + KAVFVVVNACSSKDY NNIVGV
Sbjct: 481 IYKENEETVSKLLSRALRGDEDKNVEVKLKTSSPELQGKAVFVVVNACSSKDYLNNIVGV 540
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFVGQDVT QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+ EN CC EWNTAMEKLTGW
Sbjct: 541 CFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAAGENMCCLEWNTAMEKLTGW 600
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
SR ++IGKMLVGEVFGSCCRLKGPDALTKFMI L
Sbjct: 601 SRSEVIGKMLVGEVFGSCCRLKGPDALTKFMIVL 634
>gi|57281883|emb|CAC85512.1| phytochrome A [Triticum aestivum]
Length = 1130
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/1110 (49%), Positives = 729/1110 (65%), Gaps = 53/1110 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR------TMSHSVPEQQISAYLSKI 90
T + +AQ T+DA L+A FE ES SFDYS+ V T+ +++ AYL I
Sbjct: 18 TQERVLAQTTLDAELNAEFE---ESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRG IQ FGC +A+DE +F VIA+SENA EML +VP+++ L IGT+VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALS 209
+ L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP TE PA +
Sbjct: 135 DQGAAALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPA-T 193
Query: 210 IAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVV 269
AGA+QS KLA +AIS++Q+LPGG ++LLC+TVV+ V LTGYDRVM Y+FHED HGEV
Sbjct: 194 AAGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVF 253
Query: 270 AESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLV 329
AE +P LEPY GLHYPATDIPQA+RFLF +N+VR+I D A P+ VI+DE L + L
Sbjct: 254 AEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLC 313
Query: 330 GSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-EAVGGRSTTR------LWA----- 377
GS LRA H CH QYM NM SIASL +AV++N N+E + VG + LW
Sbjct: 314 GSALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCH 373
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAG 415
F + +N E ++ QL EK +LR QT+L DML ++ SP
Sbjct: 374 HESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLT 433
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IV+ +P+IMDL+KCDGAAL Y GK + LG PTE+QI+D+ WL H DSTGLST+SL
Sbjct: 434 IVSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLH 493
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A+ LGD VCGMAVA I D LFWFRS TAKEI+WGGAK+ P D DD +RMHPR
Sbjct: 494 DAGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPR 553
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SFKAFLEVVK +SL W ++EMDAIHSLQLILR + KA ++ Q+ DL+L G+
Sbjct: 554 LSFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+V +L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV
Sbjct: 673 SSVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFV 732
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QD+T KLVMDKF ++GDY AI+H+PNPLIPPIF +DE+ C EWN AM KLTGW R
Sbjct: 733 AQDMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHRE 792
Query: 776 DIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
+++ KML+GEVF S C LK DA + +++A G++TEK PF FDR+GKY +
Sbjct: 793 EVLDKMLLGEVFDSRNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTEC 852
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPL 892
LL+ N+R N G I G FCF+ I S ELQQAL VQ+ E+K RLK +Y+ I NPL
Sbjct: 853 LLSVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPL 912
Query: 893 SGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFL 950
SG+ ++ L+ TDL E+Q + + + C Q+ KI+ D+D +I + S L+ E AEF+
Sbjct: 913 SGMLYSRKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCLDLEMAEFV 972
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L V+ A VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP
Sbjct: 973 LQDVVVAAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPV 1032
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLS 1069
VEI + T E ++ E R+ G G+P EL+ MF ++EGLGL
Sbjct: 1033 GSS-VEISAKATKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDEPQQSEEGLGLL 1091
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ R +L+LMNG+V+++RE+ F++ EL
Sbjct: 1092 VSRNLLRLMNGDVRHLREAGVSIFILTAEL 1121
>gi|218683947|gb|ACL00927.1| phytochrome D [Stanleya pinnata]
Length = 652
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/652 (78%), Positives = 555/652 (85%), Gaps = 31/652 (4%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVGI+IDLEPA+T+DPALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGILIDLEPAKTDDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEV+AESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVIAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHA+PL V+QD+ L Q +CLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGN+E+
Sbjct: 121 IVDCHASPLPVVQDDKLTQSICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNEED 180
Query: 366 AVGG-RSTTRLW--------------------------AFGLQLNMELQLASQLSEKHVL 398
GG R++ RLW AFGLQLNMELQLA Q+SEK VL
Sbjct: 181 GNGGGRNSMRLWGLIVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVL 240
Query: 399 RTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEW 458
R QTLLCDMLLRDSPAGIVTQSPSIMDLVKC+GAA YQGKYYPLGV PTE QI DIVEW
Sbjct: 241 RMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDIVEW 300
Query: 459 LLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGG 518
LL H DSTGLSTDSL DAGYP+AA LGDAVCGMAVA ITKR+FLFWFRSHT KEIKWGG
Sbjct: 301 LLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRNFLFWFRSHTEKEIKWGG 360
Query: 519 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN 578
AKHHPEDKDDGQRMHPRSSFKAFLEVVKSR PW+ EMDAIHSLQLILRDSF+++EA +
Sbjct: 361 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRCQPWETPEMDAIHSLQLILRDSFKESEAMD 420
Query: 579 SKA----VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
SKA V ++ QGV+E+ +VAREMVRLIETAT PIFAVD+ GC+NGWNAK+AE
Sbjct: 421 SKANAAEAVQPHGENMSEQGVEEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAE 480
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGLSV+EAMGKSLV DL+YKEYEE VD LL AL+G+E KNVE+KL+TFG + + KAVF
Sbjct: 481 LTGLSVDEAMGKSLVQDLIYKEYEETVDRLLSGALRGDEVKNVEVKLKTFGPDLQGKAVF 540
Query: 695 VVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASD 754
VVVNACSSKDY NNIVGVCFVG DVT QK V DKFI+IQ DYKAI+HSPNPLIPPIFA D
Sbjct: 541 VVVNACSSKDYLNNIVGVCFVGHDVTCQKTVKDKFINIQRDYKAIIHSPNPLIPPIFAVD 600
Query: 755 ENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
ENTCC EWNTAMEKLTGW R ++IGK+LV EVFGSCCRLKG D LTKFMI L
Sbjct: 601 ENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGADTLTKFMIVL 652
>gi|218683923|gb|ACL00915.1| phytochrome D [Farsetia aegyptia]
Length = 632
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/632 (78%), Positives = 543/632 (85%), Gaps = 31/632 (4%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+P+ VIQD+ L QP
Sbjct: 61 GEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVIQDDRLTQP 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW-------- 376
+CLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGN+E+ + GR++ RLW
Sbjct: 121 MCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGITVGRNSMRLWGLVVCHHT 180
Query: 377 ------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVT
Sbjct: 181 SARSIPFPLRYACEFLMQAFGLQLNMELQLAQQVSEKRVLRMQTLLCDMLLRDSPAGIVT 240
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSP+IMDLVKC+GAA Y+GKYYPLGV P+E QIKDIVEWLL H DSTGLSTDSL DAG
Sbjct: 241 QSPNIMDLVKCNGAAFLYRGKYYPLGVAPSEAQIKDIVEWLLANHSDSTGLSTDSLGDAG 300
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA LGDAVCGMAVAYITK+DFLFWFRSH+ KEIKWGGAKHHPE+KDDGQRMHPRSSF
Sbjct: 301 YPHAAALGDAVCGMAVAYITKKDFLFWFRSHSEKEIKWGGAKHHPENKDDGQRMHPRSSF 360
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK----AVVNAQLVDLELQG 594
KAFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++EA +SK + Q D+ G
Sbjct: 361 KAFLEVVKSRCQPWEAAEMDAIHSLQLILRDSFKESEAMDSKTAAAGAIQPQGEDMAEHG 420
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
++E+ +VAREMVRLIETAT PIFAVD+ GC+NGWNAK+AELTGLSVEEAMGKSLV DL+Y
Sbjct: 421 IEEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRDLIY 480
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCF 714
EYEE VD LL AL+G+E +NVEIKL+TFG E + KAVFVVVNACSSKDY NNIVGVCF
Sbjct: 481 NEYEETVDRLLSCALQGDEGRNVEIKLKTFGPEQQGKAVFVVVNACSSKDYLNNIVGVCF 540
Query: 715 VGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSR 774
VGQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENTCC EWNTAM + TGW R
Sbjct: 541 VGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMGQRTGWPR 600
Query: 775 GDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
++IGK+LVGEVFGSCCRLKGPDALTKFMI L
Sbjct: 601 SEVIGKLLVGEVFGSCCRLKGPDALTKFMIVL 632
>gi|108711122|gb|ABF98917.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
Length = 957
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/934 (54%), Positives = 660/934 (70%), Gaps = 57/934 (6%)
Query: 13 RSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR 72
RS + A S +S+ R+ H+A + +AQ +DA+LHA FE S + FDYS SV
Sbjct: 5 RSNNRATCSRSSSARSKHSA-------RVVAQTPMDAQLHAEFEGSQ---RHFDYSSSVG 54
Query: 73 TMSHS-VPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVP 131
+ S +SAYL +QRG +QPFGC +AV TF ++AYSENA EML L P +VP
Sbjct: 55 AANRSGATTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVP 114
Query: 132 NLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVD 191
++++E L +GTDVRTLF S S V L+KA ++ LLNPI +H++ +GKPFYAI+HR+D
Sbjct: 115 TIDQREALAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRID 174
Query: 192 VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTG 251
VG+VIDLEP D ++ GA++S KLA RAI++LQSLP G++ LLCD +V V +LTG
Sbjct: 175 VGLVIDLEPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTG 234
Query: 252 YDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHA 311
YDRVM Y+FHEDEHGEV+AE KR DLEPY GLHYPATDIPQASRFLF +N+VRMI DC A
Sbjct: 235 YDRVMAYKFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSA 294
Query: 312 TPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN--------GND 363
TP+ +IQD+ L QP+ + GSTLRAPHGCHAQYMA+MGS+ASL ++V IN
Sbjct: 295 TPVKIIQDDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGS 354
Query: 364 EEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLSEKHV 397
++ GR +LW FG+Q+N E++LA+Q E+H+
Sbjct: 355 DQQPKGR---KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHI 411
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDMLLRD+P GI TQSP++MDLVKCDGAALYYQ + + LG TP+E +IK+IV
Sbjct: 412 LRTQTLLCDMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVA 471
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WL YH STGLSTDSL +AGYP AA LGD VCGMA I+ +DF+FWFRSHTAKEIKWG
Sbjct: 472 WLQEYHDGSTGLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWG 531
Query: 518 GAKHHPEDKDD-GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GAKH P D DD G++MHPRSSFKAFLEVVK RS+PW++ EMDAIHSLQLILR S +D +A
Sbjct: 532 GAKHEPIDADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDA 591
Query: 577 ---SNSKAVVNAQLVDL-ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+N+K++V A D+ ++QG+ EL +V EMVRLIETATAPI AVD+ G +NGWN K
Sbjct: 592 NKNNNAKSIVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKA 651
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGL V EA+GK LV DLV + E+V +L+ AL+G E++N++IKL+TF +
Sbjct: 652 AELTGLPVMEAIGKPLV-DLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGP 710
Query: 693 VFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFA 752
V ++VNAC S+D + +VGVCFV QD+T Q ++MDK+ IQGDY AIV +P+ LIPPIF
Sbjct: 711 VILMVNACCSRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFM 770
Query: 753 SDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNA 809
++ C EWN AM+K+TG R D + K+L+GEVF CR+K LTK I ++
Sbjct: 771 INDLGSCLEWNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTV 830
Query: 810 FGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQ 869
GQD EK F F+ +GKY+++L+TA KR + EG+I GA CFL +ASPELQ AL VQ+
Sbjct: 831 ISGQDPEKLLFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKM 890
Query: 870 QEKKCFARLKELAYICQEIKNPLSGVSFTNSLLE 903
E+ KEL YI QE++NPL+G+ ++L+
Sbjct: 891 SEQAAMNSFKELTYIRQELRNPLNGMLELEAMLQ 924
>gi|218683881|gb|ACL00895.1| phytochrome B [Lepidium alyssoides]
Length = 634
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/634 (79%), Positives = 542/634 (85%), Gaps = 33/634 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLC+TVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCNTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNR+RMIVDCHATP+ V+QD+ Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRIRMIVDCHATPVLVVQDDRFTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
+CLVGSTLRAPH CH+QYMANMGSIASLA+AVIING +E+ GGR++ RLW
Sbjct: 121 MCLVGSTLRAPHRCHSQYMANMGSIASLAMAVIINGIEEDGGNVAGGRNSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q++EK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMAEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGAA Y G YYPLGV PTE QIKDIVEWLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCDGAAFIYHGGYYPLGVAPTEVQIKDIVEWLLANHADSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYIT+RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITERDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS-NSKAVVNAQLVDLEL--- 592
SFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+D+EA+ NSK A ++
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKDSEAAINSKTADGAVQPFRDMTGE 420
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QGVDEL +VAREMVRLIETAT PIFAVD G +NGWNAK+AELTGLSVEEAMGKSLV DL
Sbjct: 421 QGVDELGAVAREMVRLIETATVPIFAVDAGGYINGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
+YK+ EE VD L+ AL+GEEDKNVE+KL+TF E + KAVFVVVNACSSKDY NNIVGV
Sbjct: 481 IYKQNEETVDKLISRALRGEEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIVGV 540
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFVGQD+T QK+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+DENTCC EWNTAMEKL+GW
Sbjct: 541 CFVGQDITGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLSGW 600
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
SR ++IGKMLVGEVFGS CRLKGPDALTKFMI L
Sbjct: 601 SRSEVIGKMLVGEVFGSSCRLKGPDALTKFMIVL 634
>gi|218683857|gb|ACL00883.1| phytochrome B [Camelina microcarpa]
Length = 634
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/634 (78%), Positives = 539/634 (85%), Gaps = 33/634 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEV+AESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHATP+ V+QD+ L Q
Sbjct: 61 GEVLAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
+CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGNDE+ GRS+ RLW
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNDEDGSNVASGRSSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SEK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGA+ Y GKYY LGV P+E QI+D+VEWLL H DSTGLSTDS D
Sbjct: 241 VTQSPSIMDLVKCDGASFLYHGKYYALGVAPSEVQIRDVVEWLLANHADSTGLSTDSFGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMH RS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHSRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLEL---- 592
SFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSFR++EA+ + V+ + +
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFRESEAAMNSKTVDGAVQPYKYMAGE 420
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEAMGKSLV DL
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
+YKE EE V LL AL+G+EDKNVE+KL+TF E + KAVFVVV+ACSSKDY NNIVGV
Sbjct: 481 IYKENEETVSKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFVVVSACSSKDYLNNIVGV 540
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFV QDVT +K+VMDKFI+IQGDYKAIVHSPNPLIPPIFA+DENTCC EWNTAMEKLTG
Sbjct: 541 CFVAQDVTGRKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGL 600
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
SR ++IGKMLVGEVFGS CRLKGPDALTKFMI L
Sbjct: 601 SRSEVIGKMLVGEVFGSSCRLKGPDALTKFMIVL 634
>gi|327241182|gb|AEA40435.1| phytochrome A [Aegilops speltoides]
Length = 1130
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/1110 (49%), Positives = 727/1110 (65%), Gaps = 53/1110 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR------TMSHSVPEQQISAYLSKI 90
T + +AQ T+DA+L+A FE ES SFDYS+ V T+ +++ AYL I
Sbjct: 18 TQERVLAQTTLDAQLNAEFE---ESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRG IQPFGC +A+DE +F VIA+SENA EML A +VP+++ L IGT+VR+LFT
Sbjct: 75 QRGKMIQPFGCLLALDEKSFNVIAFSENAPEMLTTASHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALS 209
+ L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP TE PA S
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPA-S 193
Query: 210 IAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVV 269
AGA+QS KLA +AIS++Q+LPGG I+LLC+TVV+ V +LTGYDRVM Y+FHED HGEV
Sbjct: 194 AAGALQSYKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVF 253
Query: 270 AESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLV 329
AE +P LEPY GLHYPATDIPQA+RFLF +N+VRMI D A + VI+DE L + L
Sbjct: 254 AEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSIKVIEDEALPFDISLC 313
Query: 330 GSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-EAVGGRSTTR------LWA----- 377
GS LRA H CH QYM NM SIASL +AV++N N+E + VG + LW
Sbjct: 314 GSALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCH 373
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAG 415
F + +N E ++ QL EK +LR QT+L DML ++ SP
Sbjct: 374 HESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLT 433
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IV+ +P+IMDL+KCDGAAL Y K + LG PTE QI+D+ WL H DSTGLST+SL
Sbjct: 434 IVSGAPNIMDLIKCDGAALLYGDKVWRLGNAPTEFQIRDLALWLSEVHMDSTGLSTESLH 493
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A+ LGD+VCGMAVA I D LFWFRSHTA EI+WGGAK+ P D DD +RMHPR
Sbjct: 494 DAGYPGASALGDSVCGMAVAKINSSDILFWFRSHTADEIRWGGAKNDPSDVDDSRRMHPR 553
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SFKAFLEVVK +SL W ++EMDAIHSLQLILR + KA ++ Q+ DL+L G+
Sbjct: 554 LSFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+V +L+ AL+G+E+K V +++T G + V +V NAC+S+D +++VGVCFV
Sbjct: 673 SSVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVGNACASRDLHDDVVGVCFV 732
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QDVT KLVMDKF ++GDY AI+H+PNPLIPPIF +DE C EWN AM KLTGW R
Sbjct: 733 AQDVTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHRE 792
Query: 776 DIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
+++ KML+GEVF S C LK DA + +++A G++TEK PF FDR+GKY
Sbjct: 793 EVLNKMLLGEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDC 852
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPL 892
LL+ N+R N G I G FCF+ I S ELQQAL VQ+ E+ RLK +Y+ I NPL
Sbjct: 853 LLSVNRRENEGGLITGVFCFIHIPSHELQQALQVQQASEQTSLKRLKAFSYMRHAINNPL 912
Query: 893 SGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFL 950
SG+ ++ L+ TDL E+Q + + S C Q+ KI+ D+D ++I + S L+ E AEF+
Sbjct: 913 SGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMEKSSCLDLEMAEFV 972
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L V+ A VSQV++ + +++ ++PE +YGD R+QQ+L+DFL V++SP
Sbjct: 973 LQDVVLAAVSQVLIACEGKGIRVSCNLPERFMKQLIYGDGVRLQQILSDFLSVSVKFSPV 1032
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLS 1069
G ++I + T E ++ E R+ G G+P EL+ MF ++EGLGL
Sbjct: 1033 G-GSIDISAKATKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDDAGQSEEGLGLL 1091
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ +L+LMNG+V+++RE+ F++ EL
Sbjct: 1092 VSSNLLRLMNGDVRHLREAGLSVFILTAEL 1121
>gi|327241172|gb|AEA40430.1| phytochrome A type 1 [Triticum aestivum]
Length = 1130
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/1110 (49%), Positives = 728/1110 (65%), Gaps = 53/1110 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR------TMSHSVPEQQISAYLSKI 90
T + +AQ T+DA L+A FE ES SFDYS+ V T+ +++ AYL I
Sbjct: 18 TQERVLAQTTLDAELNAGFE---ESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRG IQ FGC +A+DE +F VIA+S NA EML +VP+++ L IGT+VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSGNAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALS 209
+ L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP TE PA +
Sbjct: 135 DQGAAALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPA-T 193
Query: 210 IAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVV 269
AGA+QS KLA +AIS++Q+LPGG ++LLC+TVV+ V LTGYDRVM Y+FHED HGEV
Sbjct: 194 AAGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVF 253
Query: 270 AESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLV 329
AE +P LEPY GLHYPATDIPQA+RFLF +N+VR+I D A P+ VI+DE L + L
Sbjct: 254 AEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLC 313
Query: 330 GSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-EAVGGRSTTR------LWA----- 377
GS LRA H CH QYM NM SIASL +AV++N N+E + VG + LW
Sbjct: 314 GSALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCH 373
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAG 415
F + +N E ++ QL EK +LR QT+L DML ++ SP
Sbjct: 374 HESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLT 433
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IV+ +P+IMDL+KCDGAAL Y GK + LG PTE+QI+D+ WL H DSTGLST+SL
Sbjct: 434 IVSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLH 493
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A+ LGD VCGMAVA I D LFWFRS TAKEI+WGGAK+ P D DD +RMHPR
Sbjct: 494 DAGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPR 553
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SFKAFLEVVK +SL W ++EMDAIHSLQLILR + KA ++ Q+ DL+L G+
Sbjct: 554 LSFKAFLEVVKMKSLAWADSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+V +L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV
Sbjct: 673 SSVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFV 732
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QD+T KLVMDKF ++GDY AI+H+PNPLIPPIF +DE+ C EWN AM KLTGW R
Sbjct: 733 AQDMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHRE 792
Query: 776 DIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
+++ KML+GEVF S C LK DA + +++A G++TEK PF FDR+GKY +
Sbjct: 793 EVLDKMLLGEVFDSRNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTEC 852
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPL 892
LL+ N+R N G I G FCF+ I S ELQQAL VQ+ E+K RLK +Y+ I NPL
Sbjct: 853 LLSVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPL 912
Query: 893 SGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFL 950
SG+ ++ L+ TDL E+Q + + + C Q+ KI+ D+D +I + S L+ E AEF+
Sbjct: 913 SGMLYSRKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCLDLEMAEFV 972
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L V+ A VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP
Sbjct: 973 LQDVVVAAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPV 1032
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLS 1069
VEI + T E ++ E R+ G G+P EL+ MF ++EGLGL
Sbjct: 1033 GSS-VEISAKATKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDEPQQSEEGLGLL 1091
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ R +L+LMNG+V+++RE+ F++ EL
Sbjct: 1092 VSRNLLRLMNGDVRHLREAGVSIFILTAEL 1121
>gi|218683937|gb|ACL00922.1| phytochrome D [Malcolmia africana]
Length = 632
Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/632 (78%), Positives = 540/632 (85%), Gaps = 31/632 (4%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEV+AESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDC A+P+ V+QD+ L Q
Sbjct: 61 GEVIAESKREDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCSASPVRVVQDDRLAQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW--------- 376
+CLVGSTLRAPHGCHAQYMANMG+ ASLA+AVIIN N+E+ GGR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGTTASLAMAVIINANEEDGTGGRNSMRLWGLVVCHHTS 180
Query: 377 ------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVT
Sbjct: 181 ASRCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVT 240
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSPSIMDLVKC+GAA YQGKYY LGV P+E QI +IVEWLL H DSTGLSTDSL+DAG
Sbjct: 241 QSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQIHEIVEWLLAKHSDSTGLSTDSLSDAG 300
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YPKAA LGDAVCGMAVAYITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPRSSF
Sbjct: 301 YPKAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSF 360
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS-NSKAVVNAQLVDLEL---QG 594
KAFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++EA+ NSK+ A ++ QG
Sbjct: 361 KAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAAMNSKSADGAVQPCKDMAGEQG 420
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+DEL +VAREMVRLIETAT PIFAVD GC+NGWNAK+AELTGLSVEEA GKSLV DL++
Sbjct: 421 IDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEATGKSLVSDLIH 480
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCF 714
KE EE V LL AL+G+E+KNVE+KL+TFG+E KAVFVVVNACSSKDY NNIVGVCF
Sbjct: 481 KENEETVSQLLSRALRGDEEKNVEVKLKTFGSELEGKAVFVVVNACSSKDYLNNIVGVCF 540
Query: 715 VGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSR 774
VGQD+T QK VMDKFI+IQGDYKAIVHSPNPLIPPIFA+DENTCC EWNTAMEKLTGWSR
Sbjct: 541 VGQDITSQKTVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWSR 600
Query: 775 GDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
++IGKMLVGEVFGSCCRLKG DALTKFMI L
Sbjct: 601 SEVIGKMLVGEVFGSCCRLKGADALTKFMIVL 632
>gi|327241176|gb|AEA40432.1| phytochrome A type 1 [Triticum dicoccoides]
Length = 1130
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1110 (49%), Positives = 727/1110 (65%), Gaps = 53/1110 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR------TMSHSVPEQQISAYLSKI 90
T + +AQ T+DA L+A FE ES SFD S+ V T+ +++ AYL I
Sbjct: 18 TQERVLAQTTLDAELNAEFE---ESSDSFDDSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRG IQ FGC +A+DE +F VIA+SENA EML +VP+++ L IGT+VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALS 209
+ L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP TE PA +
Sbjct: 135 DQGAAALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPA-T 193
Query: 210 IAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVV 269
AGA+QS KLA +AIS++Q+LPGG ++LLC+TVV+ V LTGYDRVM Y+FHED HGEV
Sbjct: 194 AAGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVF 253
Query: 270 AESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLV 329
AE +P LEPY GLHYPATDIPQA+RFLF +N+VR+I D A P+ VI+DE L + L
Sbjct: 254 AEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLC 313
Query: 330 GSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-EAVGGRSTTR------LWA----- 377
GS LRA H CH QYM NM SIASL +AV++N N+E + VG + LW
Sbjct: 314 GSALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCH 373
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAG 415
F + +N E ++ QL EK +LR QT+L DML ++ SP
Sbjct: 374 HESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLT 433
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IV+ +P+IMDL+KCDGAAL Y GK + LG PTE+QI+D+ WL H DSTGLST+SL
Sbjct: 434 IVSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLH 493
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A+ LGD VCGMAVA I D LFWFRS TAKEI+WGGAK+ P D DD +RMHPR
Sbjct: 494 DAGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPR 553
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SFKAFLEVVK +SL W ++EMDAIHSLQLILR + KA ++ Q+ DL+L G+
Sbjct: 554 LSFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+V +L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV
Sbjct: 673 SSVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFV 732
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QD+T KLVMDKF ++GDY AI+H+PNPLIPPIF +DE+ C EWN AM KLTGW R
Sbjct: 733 AQDMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHRE 792
Query: 776 DIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
+++ KML+GEVF S LK DA + +++A G++TEK PF FDR+GKY +
Sbjct: 793 EVLDKMLLGEVFDSRNASWPLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTEC 852
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPL 892
LL+ N+R N G I G FCF+ I S ELQQAL VQ+ E+K RLK +Y+ I NPL
Sbjct: 853 LLSVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPL 912
Query: 893 SGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFL 950
SG+ ++ L+ TDL E+Q + + + C Q+ KI+ D+D +I + S L+ E AEF+
Sbjct: 913 SGMLYSRKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCLDLEMAEFV 972
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L V+ A VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP
Sbjct: 973 LQDVVVAAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPV 1032
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLS 1069
VEI + T E ++ E R+ G G+P EL+ MF ++EGLGL
Sbjct: 1033 GSS-VEISAKATKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDEPQQSEEGLGLL 1091
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ R +L+LMNG+V+++RE+ F++ EL
Sbjct: 1092 VSRNLLRLMNGDVRHLREAGVSIFILTAEL 1121
>gi|218683849|gb|ACL00879.1| phytochrome B [Arabidopsis lyrata]
Length = 634
Score = 1028 bits (2658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/634 (79%), Positives = 540/634 (85%), Gaps = 33/634 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDC+A P+ V+QD+ L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNAKPVLVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTRLW------ 376
+CLVGSTLRAPHGCH+QYMANMGS ASLA+AVIINGN+E+ A GRS+ RLW
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSTASLAMAVIINGNEEDGSNAASGRSSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SEK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSSRRIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGAA Y GKYYPLGV P+E QIKD+VEWLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHADSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED+DDGQRMHPR
Sbjct: 301 AGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDEDDGQRMHPRL 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS-NSKAVVNAQLVDLEL--- 592
SF+AFL VVKSRS PW+ AEMDAIHSLQLILRDSF+++EA+ NSKAV A ++
Sbjct: 361 SFQAFLGVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAVQPCRDMAGE 420
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QG+DEL +VAREMVRLIETAT PIFAVD GC+NGWNA +AELTGLSVEEAMGKSLV DL
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNATIAELTGLSVEEAMGKSLVSDL 480
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
+YK EE V+ LL AL+G+E+KNVE+KL+TF E + KA FVVVNAC SKDY NNIVGV
Sbjct: 481 IYKGNEETVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAXFVVVNACFSKDYLNNIVGV 540
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFVGQDVT QKLVMDKFI+IQGDYKAIVHSPNPLIPPIFA+DENTCC EWN AMEKLTGW
Sbjct: 541 CFVGQDVTGQKLVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNMAMEKLTGW 600
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
SR ++IGKMLVGEVFGSCC LKGPDALTKFMI L
Sbjct: 601 SRSEVIGKMLVGEVFGSCCMLKGPDALTKFMIVL 634
>gi|77963960|gb|ABB13322.1| phytochrome A [Hordeum vulgare subsp. vulgare]
Length = 1130
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/1110 (49%), Positives = 729/1110 (65%), Gaps = 53/1110 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR------TMSHSVPEQQISAYLSKI 90
T + +AQ T+DA L+A FE ES SFDYS+ V T+ +++ AYL I
Sbjct: 18 TQERVLAQTTLDAELNAEFE---ESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRG IQ FGC +A+DE +F VIA+SENA EML +VP+++ L IGT+VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALS 209
+ L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP TE PA +
Sbjct: 135 EQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPA-T 193
Query: 210 IAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVV 269
AGA+QS KLA +AIS++Q+LPGG ++LLC+TVV+ V +LTGYDRVM Y+FHED HGEV
Sbjct: 194 AAGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVF 253
Query: 270 AESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLV 329
AE +P LEPY GLHYPATDIPQA+RFLF +N+VRMI D A L VI+DE L + L
Sbjct: 254 AEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLC 313
Query: 330 GSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-------EAVGGRSTTRLWA----- 377
GS+LRA H CH QYM NM SIASL +AV++N ++E + + LW
Sbjct: 314 GSSLRAAHSCHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCH 373
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAG 415
F + +N E ++ QL EK +LR QT+L DML ++ SP
Sbjct: 374 HESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLT 433
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IV+ +P+IMDL+KCDGAAL Y K + LG PTE+QI+ I WL H DSTGLST+SL
Sbjct: 434 IVSGTPNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLH 493
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A+ LGD VCG+AVA I D LFWFRSHTA+EI+WGGAK+ P D+DD +RMHPR
Sbjct: 494 DAGYPGASALGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPR 553
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SFKAFLEVVK +SL W + EMDAIHSLQLILR + D KA ++ Q+ DL+L G+
Sbjct: 554 LSFKAFLEVVKMKSLAWSDYEMDAIHSLQLILRGALDDVAKPTGKASLDEQIGDLKLDGI 613
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+V +L+ AL+G+E+K V ++T G + V +VVNAC+S+D +++VGVCFV
Sbjct: 673 SSVPVVQRMLYLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFV 732
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QD+T KLVMDKF ++GDY AIVH+PNPLIPPIF +DE CSEWN AM KLTGW R
Sbjct: 733 AQDMTVHKLVMDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHRE 792
Query: 776 DIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
+++ KML+GEVF S C LK DA + +++A G++TEK PF FDR+GKY +
Sbjct: 793 EVLDKMLLGEVFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTEC 852
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPL 892
LL+ N R N +G I G FCF+ I S ELQQAL VQ+ E+ RLK +Y+ I NPL
Sbjct: 853 LLSVNSRANEDGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPL 912
Query: 893 SGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFL 950
SG+ ++ L+ TDL E+Q + + S C Q+ KI+ D+D ++I + S L+ E AEF+
Sbjct: 913 SGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLDLEMAEFV 972
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L V+ A VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP
Sbjct: 973 LQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFLSISVKFSPV 1032
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLS 1069
G VEI + T E ++ E R+ G G+P EL+ MF + ++EGLGL
Sbjct: 1033 G-GSVEISAQATKNSIGENLHLIDLELRIKHRGLGVPAELMAQMFEEENTEQSEEGLGLL 1091
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ R +L+LMNG+V+++RE+ F++ EL
Sbjct: 1092 VSRNLLRLMNGDVRHLREAGMSIFILTAEL 1121
>gi|406685623|gb|AFS51252.1| phytochrome P, partial [Sundacarpus amarus]
Length = 670
Score = 1024 bits (2647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/670 (73%), Positives = 563/670 (84%), Gaps = 34/670 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------I 138
AYLS++QRGG IQPFGC + V+EA F++IAYSENA EML L PQSVPN++ + +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLTVEEAGFKIIAYSENALEMLDLMPQSVPNMDLGDPAGGGAV 60
Query: 139 LTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDL 198
L IGTDVRTLFT +S+ LEKA AREI+L+NPIW+HS+ TGKPFYAI+HR+DVGIV+DL
Sbjct: 61 LAIGTDVRTLFTPASARALEKAAVAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVVDL 120
Query: 199 EPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVY 258
EP R D A+S AGAVQSQKLAVRAIS+LQSLP GD+ LLCDTVVE VR+LTGYDRVM Y
Sbjct: 121 EPLRMGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDVGLLCDTVVEDVRELTGYDRVMAY 180
Query: 259 RFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQ 318
+FHEDEHGEVVAE +R DLEPY G HYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGSHYPATDIPQASRFLFMQNRVRMICDCSATPVRVIQ 240
Query: 319 DEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGNDEE G GR++ +LW
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGGTSGRTSMKLW 300
Query: 377 --------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
AFGLQLNMELQLA+Q++EKH+LRTQTLLCDMLLR
Sbjct: 301 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLR 360
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
D+P GIV+QSPSIM+LVKCDGAALYY G + LGVTPTE QIKDI +WLL YHGDSTGLS
Sbjct: 361 DAPIGIVSQSPSIMNLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDL 590
RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K +V+A+L D+
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDM 540
Query: 591 ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVH 650
+LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVH
Sbjct: 541 KLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVH 600
Query: 651 DLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
DLV++E E V+ +L+ AL+GEE+KNVE+KLRTFG E +K+A+++VVNACSS DYT+NIV
Sbjct: 601 DLVFEESAESVEKMLYRALRGEEEKNVEVKLRTFGLEKQKEAIYLVVNACSSMDYTDNIV 660
Query: 711 GVCFVGQDVT 720
GVCFVGQDVT
Sbjct: 661 GVCFVGQDVT 670
>gi|77963956|gb|ABB13320.1| phytochrome A [Hordeum vulgare subsp. vulgare]
gi|77963958|gb|ABB13321.1| phytochrome A [Hordeum vulgare subsp. vulgare]
Length = 1130
Score = 1024 bits (2647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/1110 (49%), Positives = 729/1110 (65%), Gaps = 53/1110 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR------TMSHSVPEQQISAYLSKI 90
T + +AQ T+DA L+A FE ES SFDYS+ V T+ +++ AYL I
Sbjct: 18 TQERMLAQTTLDAELNAEFE---ESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRG IQ FGC +A+DE +F +IA+SENA EML +VP+++ L IGT+VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNLIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALS 209
+ L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP TE PA +
Sbjct: 135 EQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPA-T 193
Query: 210 IAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVV 269
AGA+QS KLA +AIS++Q+LPGG ++LLC+TVV+ V +LTGYDRVM Y+FHED HGEV
Sbjct: 194 AAGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVF 253
Query: 270 AESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLV 329
AE +P LEPY GLHYPATDIPQA+RFLF +N+VRMI D A L VI+DE L + L
Sbjct: 254 AEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLC 313
Query: 330 GSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-------EAVGGRSTTRLWA----- 377
GS+LRA H CH QYM NM SIASL +AV++N ++E + + LW
Sbjct: 314 GSSLRAAHSCHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCH 373
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAG 415
F + +N E ++ QL EK +LR QT+L DML ++ SP
Sbjct: 374 HESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLT 433
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IV+ +P+IMDL+KCDGAAL Y K + LG PTE+QI+ I WL H DSTGLST+SL
Sbjct: 434 IVSGTPNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLH 493
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A+ LGD VCG+AVA I D LFWFRSHTA+EI+WGGAK+ P D+DD +RMHPR
Sbjct: 494 DAGYPGASALGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPR 553
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SFKAFLEVVK +SL W + EMDAIHSLQLILR + D KA ++ Q+ DL+L G+
Sbjct: 554 LSFKAFLEVVKMKSLAWSDYEMDAIHSLQLILRGALDDVAKPTGKASLDEQIGDLKLDGI 613
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+V +L+ AL+G+E+K V ++T G + V +VVNAC+S+D +++VGVCFV
Sbjct: 673 SSVPVVQRMLYLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFV 732
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QD+T KLVMDKF ++GDY AIVH+PNPLIPPIF +DE CSEWN AM KLTGW R
Sbjct: 733 AQDMTVHKLVMDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHRE 792
Query: 776 DIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
+++ KML+GEVF S C LK DA + +++A G++TEK PF FDR+GKY +
Sbjct: 793 EVLDKMLLGEVFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTEC 852
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPL 892
LL+ N R N +G I G FCF+ I S ELQQAL VQ+ E+ RLK +Y+ I NPL
Sbjct: 853 LLSVNSRANEDGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPL 912
Query: 893 SGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFL 950
SG+ ++ L+ TDL E+Q + + S C Q+ KI+ D+D ++I + S L+ E AEF+
Sbjct: 913 SGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLDLEMAEFV 972
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L V+ A VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP
Sbjct: 973 LQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPV 1032
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLS 1069
G VEI + T E ++ E R+ G G+P EL+ MF + ++EGLGL
Sbjct: 1033 G-GSVEISAQATKNSIGENLHLIDLELRIKHRGLGVPAELMAQMFEEENTEQSEEGLGLL 1091
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ R +L+LMNG+V+++RE+ F++ EL
Sbjct: 1092 VSRNLLRLMNGDVRHLREAGMSIFILTAEL 1121
>gi|218683909|gb|ACL00909.1| phytochrome D [Camelina microcarpa]
Length = 631
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/631 (78%), Positives = 535/631 (84%), Gaps = 30/631 (4%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+P+ V+QD+ L QP
Sbjct: 61 GEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQP 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW------- 376
+CLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGN+E+ V GR + RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGVNTSGRHSMRLWGLVVCHH 180
Query: 377 -------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIV 417
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDS AGIV
Sbjct: 181 TSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSRAGIV 240
Query: 418 TQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADA 477
Q PSIMDLVKC+GAA YQG+YYPLGV PTE QI DIV+WLL H DSTGLSTDSL+DA
Sbjct: 241 MQRPSIMDLVKCNGAAFLYQGRYYPLGVAPTEAQINDIVKWLLANHSDSTGLSTDSLSDA 300
Query: 478 GYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 537
GYP AA LGDAVCGMAVAYITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPRSS
Sbjct: 301 GYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSS 360
Query: 538 FKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV--VNAQLVDLELQGV 595
F+AFLEVVK R PW+ AEMDAIHSLQLILRDSF+++E +SKA V D+ QG+
Sbjct: 361 FQAFLEVVKGRCQPWETAEMDAIHSLQLILRDSFKESETMDSKAAAAVQPHKDDMADQGM 420
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
E+ +VAREMVRLIETAT PIFAVD+ GC+NGWN K+AELTGLSVEEAMGKSLV DL+YK
Sbjct: 421 QEIGAVAREMVRLIETATVPIFAVDIDGCINGWNDKIAELTGLSVEEAMGKSLVRDLIYK 480
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
EY E VD LL ALKG+E KNVE+KL+ F E + KAVFVVVN+CSSKDY+NNIVGVCFV
Sbjct: 481 EYAETVDRLLSCALKGDEGKNVEVKLKNFSPELQGKAVFVVVNSCSSKDYSNNIVGVCFV 540
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
GQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R
Sbjct: 541 GQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRS 600
Query: 776 DIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
++IGKMLV EVFGSCCRLKGPDALTKFMI L
Sbjct: 601 EVIGKMLVKEVFGSCCRLKGPDALTKFMIVL 631
>gi|406685523|gb|AFS51202.1| phytochrome P, partial [Lepidothamnus laxifolius]
Length = 670
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/670 (73%), Positives = 564/670 (84%), Gaps = 34/670 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------I 138
AYLS++QRGG IQPFGC +AV+E F++IAYSENA EML + PQ VPN++ + +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSENALEMLDIMPQYVPNMDLGKSGGGGAV 60
Query: 139 LTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDL 198
LTIGTDVRTLFT++ + LEKA A+EI+L+NPIW+HS+ GKPFYAI+HR+DVG+VIDL
Sbjct: 61 LTIGTDVRTLFTAAGARALEKASMAQEISLMNPIWVHSQYAGKPFYAIVHRIDVGMVIDL 120
Query: 199 EPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVY 258
EPA+T D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY
Sbjct: 121 EPAKTGDAAMSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 259 RFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQ 318
+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 319 DEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW 376
+ LMQ LCLVGSTLRAPHGCHAQYMANMGSIASLA+AV+INGNDEE G GRS+ +LW
Sbjct: 241 SQDLMQLLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVINGNDEEGGGTSGRSSMKLW 300
Query: 377 --------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLR
Sbjct: 301 GLVVCHHTSPRAVPFPLRYGCEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 360
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
D+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL YHGDSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSLADAGYP AA+LGDAVCGMA A IT DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDL 590
RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D E SN+K +V+A+L DL
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIEDSNTKTMVHARLNDL 540
Query: 591 ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVH 650
+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKVAELTGL V EAMG+SLVH
Sbjct: 541 KLQGIDELSSVASEMVRLIETATAPILAVDSEGLVNGWNAKVAELTGLPVGEAMGESLVH 600
Query: 651 DLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
DLV +E E V+ +L+ A++GEE+KN+EIKLRTFG + +K+A+++VVNACSS+DYT+NIV
Sbjct: 601 DLVCEESAECVEKMLNRAVRGEEEKNIEIKLRTFGPQKQKEAIYLVVNACSSRDYTDNIV 660
Query: 711 GVCFVGQDVT 720
GVCFV QDVT
Sbjct: 661 GVCFVAQDVT 670
>gi|218683897|gb|ACL00903.1| phytochrome D [Arabidopsis halleri]
Length = 635
Score = 1021 bits (2641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/635 (77%), Positives = 537/635 (84%), Gaps = 34/635 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA----VGGRSTTRLW----- 376
+CLVGSTLRAPHGCHAQYM NMGSIASLA+AVIINGN+E+ GGR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVC 180
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSP G
Sbjct: 181 HHTSARCIPFPLRCACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPTG 240
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQ PSIMDLVKC+GAA YQGKYY LGV PTE QI DIVEWLL H DSTGLSTDSL
Sbjct: 241 IVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIVEWLLANHSDSTGLSTDSLG 300
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP+AA LGDAVCGMAVA ITKRDFLFWFRSHT KEI+WGGAKHHPEDKDDGQRMHPR
Sbjct: 301 DAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIRWGGAKHHPEDKDDGQRMHPR 360
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV----VNAQLVDLE 591
+SF+AFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++EA +SKA V D+
Sbjct: 361 ASFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKASAPGGVQPHGDDMA 420
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
QG+ E+ +VAREM+RLIETAT PIFAVD+ GC+NGWNAK+AELTGLSVEEAMGKSLV D
Sbjct: 421 EQGLQEIGTVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRD 480
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
L+YKEYEE D LL ALKG+E KNVE+KL+TF E + KAVFVVVNACSSKDY NNIVG
Sbjct: 481 LIYKEYEETADRLLSCALKGDEGKNVEVKLKTFAPELQGKAVFVVVNACSSKDYLNNIVG 540
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTG
Sbjct: 541 VCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEKLTG 600
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
W R ++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 601 WPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 635
>gi|327241174|gb|AEA40431.1| phytochrome A [Triticum monococcum]
Length = 1130
Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/1110 (48%), Positives = 724/1110 (65%), Gaps = 53/1110 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR------TMSHSVPEQQISAYLSKI 90
T + +AQ T+DA L+A FE ES SFDYS+ V T+ +++ AYL I
Sbjct: 18 TQERVLAQTTLDAELNAEFE---ESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRG IQ FGC +A+DE +F VIA+SENA EML +VP+++ L IGT+VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALS 209
+ L KA G +++LLNPI + K +GKPFYAI+HR +V+D EP TE PA +
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPA-T 193
Query: 210 IAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVV 269
AGA+QS KLA +AIS++Q+LPGG ++LLC+TVV+ V +LTGYDRVM Y+FHED HGEV
Sbjct: 194 AAGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVF 253
Query: 270 AESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLV 329
AE +P LEPY GLHYPATDIPQA+RFLF +N+VRMI D A L VI+DE L + L
Sbjct: 254 AEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSLKVIEDEALPFDISLC 313
Query: 330 GSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-EAVGGRSTTR------LWA----- 377
GS LRA H CH QYM NM SIASL +AV++N N+E + VG + LW
Sbjct: 314 GSALRAAHSCHLQYMENMSSIASLVMAVVVNENEEDDEVGSEQPAQQQQKKILWGLIVCH 373
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAG 415
F + +N E ++ QL EK +LR QT+L DML ++ SP
Sbjct: 374 HESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLT 433
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IV+ +P+IMDL+KCDGAAL Y GK + LG PT++QI D+ WL H DSTGLST+SL
Sbjct: 434 IVSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTDSQIHDLALWLSEVHMDSTGLSTESLH 493
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A+ LGD VCGMAVA I D LFWFRS TAKEI+WGGAK+ P D DD +RMHPR
Sbjct: 494 DAGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPR 553
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SFKAFLEVVK +SL W ++EMDAIHSLQLILR + KA ++ Q+ DL+L G+
Sbjct: 554 LSFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+V +L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV
Sbjct: 673 SSVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFV 732
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QD+T KLVMDKF ++GDY AI+H+PNPLIPPIF +DE C EWN AM KLTGW R
Sbjct: 733 AQDMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHRE 792
Query: 776 DIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
+++ KML+GEVF S LK DA + + + +A G++TEK PF FDR+GKY +
Sbjct: 793 EVLDKMLLGEVFDSRNASWLLKNKDAFGRLCVVITSALAGEETEKLPFGFFDRSGKYNEC 852
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPL 892
LL+ N+R N G I G FCF+ I S ELQQAL VQ+ E+K RLK +Y+ I NPL
Sbjct: 853 LLSVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQALEQKSLKRLKAFSYMRHAINNPL 912
Query: 893 SGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFL 950
SG+ ++ L+ T L E+Q + + + C Q+ KI+ D+D + + S L+ E AEF+
Sbjct: 913 SGMLYSRKALKNTHLNEEQMRQIHVADNCHHQLNKILADLDQHNTMEKSSCLDLEMAEFV 972
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L V+ A VSQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP
Sbjct: 973 LQDVVVAAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPV 1032
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSR-WMTQEGLGLS 1069
VEI + T E ++ E R+ G G+P EL+ MF ++EGLGL
Sbjct: 1033 GSS-VEISAKATKNSIGENLHLIDLELRIKHQGLGVPAELMAQMFEEDDPQQSEEGLGLL 1091
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ R +L+LMNG+++++RE+ F++ EL
Sbjct: 1092 VSRNLLRLMNGDIRHLREAGVSIFILTAEL 1121
>gi|218683933|gb|ACL00920.1| phytochrome D [Malcolmia africana]
Length = 630
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/630 (78%), Positives = 540/630 (85%), Gaps = 29/630 (4%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVV+SVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEV+AESKR DLEPY GLHYPATDI QASRFLFKQNRVRMIVDC A+P+ V+QD+ L Q
Sbjct: 61 GEVIAESKREDLEPYIGLHYPATDILQASRFLFKQNRVRMIVDCSASPVRVVQDDRLAQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW--------- 376
+CLVGSTLRAPHGCHAQYMANMG++ASLA+AVIIN N+E+ GGR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGTVASLAMAVIINANEEDGTGGRNSMRLWGLVVCHHTS 180
Query: 377 ------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGIVT
Sbjct: 181 ASRCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVT 240
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSPSIMDLVKC+GAA YQGKYY LGV P+E QI +IVEWLL H DSTGLSTDSL+DAG
Sbjct: 241 QSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQIHEIVEWLLAKHSDSTGLSTDSLSDAG 300
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YPKAA LGDAVCGMAVAYITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPRSSF
Sbjct: 301 YPKAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSF 360
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV-VNAQLVDLELQGVDE 597
KAFLEVVKSR PW+ AEMDAIHSLQLILRDSF++A A+ + V + D+ +G+DE
Sbjct: 361 KAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKEAAAAAAAGVAIQPHGEDMTEKGMDE 420
Query: 598 LSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEY 657
+ +VAREMVRLIETAT PIFAVD+ GC+NGWNAK+AELT LSVEEAMGKSLV DL+YKEY
Sbjct: 421 IGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTCLSVEEAMGKSLVRDLIYKEY 480
Query: 658 EEIVDNLLHHALKGEEDKNVEIKLRTFGAENR-KKAVFVVVNACSSKDYTNNIVGVCFVG 716
EE VD LL +ALKGEE KNVE+KL+TFGA + K+AVFVVVNACSSKDY NNIVGVCFVG
Sbjct: 481 EETVDKLLSNALKGEEGKNVEVKLKTFGAMVQGKEAVFVVVNACSSKDYLNNIVGVCFVG 540
Query: 717 QDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGD 776
+DVT +K VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R +
Sbjct: 541 KDVTSEKFVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSE 600
Query: 777 IIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
+IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 601 VIGKLLVKEVFGSCCRLKGPDALTKFMIVL 630
>gi|218683877|gb|ACL00893.1| phytochrome B [Lepidium alyssoides]
Length = 634
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/634 (78%), Positives = 537/634 (84%), Gaps = 33/634 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRNLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFL KQNR+RMIVDCHATP+ V+QD+ L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLIKQNRIRMIVDCHATPVLVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
+CLVGSTLRAPH CH+QYMANMGSIASLA+AVIING +E+ GGR++ RLW
Sbjct: 121 MCLVGSTLRAPHRCHSQYMANMGSIASLAMAVIINGIEEDGGNVAGGRNSMRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q++EK VLRTQTLLCDMLLRDSPAGI
Sbjct: 181 HTSPRCIPFPLRYACEFLMQAFGLQLNMELQLALQMAEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKCDGAA Y G YYPLGV PTE QIKDIVEWLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCDGAAFIYHGGYYPLGVAPTEVQIKDIVEWLLANHADSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP AA LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS-NSKAVVNA--QLVDLE-L 592
SFKAFLEVVKS S PW+ AEMDAIHSLQLILRDSF+++EA+ NSK A L D+
Sbjct: 361 SFKAFLEVVKSHSQPWETAEMDAIHSLQLILRDSFKESEAAINSKTADGAVQPLRDMTGE 420
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QG+DEL VAREMVRLIETAT PIFAVD G +NGWNAK+AELTGLSVEEAMGKSLV DL
Sbjct: 421 QGIDELGVVAREMVRLIETATVPIFAVDAGGYINGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
+YK+ E V L+ AL+GEEDKNVE+KL+TF E + KAVFVVVNACSSKDY NNI+G+
Sbjct: 481 IYKQNGETVIKLISRALRGEEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIIGI 540
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CFVGQDVT QK+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENTCC EWNTAMEKL+GW
Sbjct: 541 CFVGQDVTGQKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLSGW 600
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
R ++IGKMLVGEVFGS CRLKGPDALTKFMI L
Sbjct: 601 PRSEVIGKMLVGEVFGSSCRLKGPDALTKFMIVL 634
>gi|218683901|gb|ACL00905.1| phytochrome D [Arabidopsis lyrata]
Length = 636
Score = 1016 bits (2626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/636 (77%), Positives = 535/636 (84%), Gaps = 35/636 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAV AIS LQSLPGGDIKLLCDTVV+SVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVCAISHLQSLPGGDIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA-----VGGRSTTRLW---- 376
+CLVGSTLRAPHGCHAQYM NMGSIASLA+AVIINGN+E+ GGR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGGLNTGGRNSMRLWGLVV 180
Query: 377 ----------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPA 414
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSP
Sbjct: 181 CHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPT 240
Query: 415 GIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSL 474
GIVTQ PSIMDLVKC+GAA YQGKYY LGV PTE QI DIVEWLL H DSTGLSTDSL
Sbjct: 241 GIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIVEWLLANHSDSTGLSTDSL 300
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP+AA LGDAVCGMAVA ITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHP
Sbjct: 301 GDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHP 360
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV----VNAQLVDL 590
RSSF+AFLEVVKS+ PW+ AEMDAIHSLQLILRDSF+++EA +SKA V D+
Sbjct: 361 RSSFQAFLEVVKSQCQPWETAEMDAIHSLQLILRDSFKESEAMDSKASAPGGVQPHGDDM 420
Query: 591 ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVH 650
QG+ E+ +VAREM+RLIETAT PIFAVD+ GC+NGWNAK+AELTGLSVEEAMGKSLV
Sbjct: 421 AEQGMQEIGAVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVR 480
Query: 651 DLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
DL+YKEY+E D LL ALKG+E KNVE+KLRTFG E + KAVFVVVNACSSKDY NNIV
Sbjct: 481 DLIYKEYKETADRLLSCALKGDEGKNVEVKLRTFGPELQGKAVFVVVNACSSKDYLNNIV 540
Query: 711 GVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLT 770
GVCFVGQDVT K VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENTCC EWNTAMEKLT
Sbjct: 541 GVCFVGQDVTGHKFVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEKLT 600
Query: 771 GWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
GW R ++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 601 GWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 636
>gi|410718222|gb|AFV79487.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 627/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + + +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGNGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFLQI
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLQI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718214|gb|AFV79483.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/844 (58%), Positives = 626/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALTK I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTKLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718130|gb|AFV79441.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 626/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718122|gb|AFV79437.1| phytochrome N, partial [Pinus sylvestris]
gi|410718124|gb|AFV79438.1| phytochrome N, partial [Pinus sylvestris]
gi|410718126|gb|AFV79439.1| phytochrome N, partial [Pinus sylvestris]
gi|410718134|gb|AFV79443.1| phytochrome N, partial [Pinus sylvestris]
gi|410718136|gb|AFV79444.1| phytochrome N, partial [Pinus sylvestris]
gi|410718138|gb|AFV79445.1| phytochrome N, partial [Pinus sylvestris]
gi|410718142|gb|AFV79447.1| phytochrome N, partial [Pinus sylvestris]
gi|410718144|gb|AFV79448.1| phytochrome N, partial [Pinus sylvestris]
gi|410718150|gb|AFV79451.1| phytochrome N, partial [Pinus sylvestris]
gi|410718152|gb|AFV79452.1| phytochrome N, partial [Pinus sylvestris]
gi|410718154|gb|AFV79453.1| phytochrome N, partial [Pinus sylvestris]
gi|410718156|gb|AFV79454.1| phytochrome N, partial [Pinus sylvestris]
gi|410718158|gb|AFV79455.1| phytochrome N, partial [Pinus sylvestris]
gi|410718160|gb|AFV79456.1| phytochrome N, partial [Pinus sylvestris]
gi|410718162|gb|AFV79457.1| phytochrome N, partial [Pinus sylvestris]
gi|410718164|gb|AFV79458.1| phytochrome N, partial [Pinus sylvestris]
gi|410718168|gb|AFV79460.1| phytochrome N, partial [Pinus sylvestris]
gi|410718172|gb|AFV79462.1| phytochrome N, partial [Pinus sylvestris]
gi|410718176|gb|AFV79464.1| phytochrome N, partial [Pinus sylvestris]
gi|410718178|gb|AFV79465.1| phytochrome N, partial [Pinus sylvestris]
gi|410718180|gb|AFV79466.1| phytochrome N, partial [Pinus sylvestris]
gi|410718182|gb|AFV79467.1| phytochrome N, partial [Pinus sylvestris]
gi|410718184|gb|AFV79468.1| phytochrome N, partial [Pinus sylvestris]
gi|410718186|gb|AFV79469.1| phytochrome N, partial [Pinus sylvestris]
gi|410718188|gb|AFV79470.1| phytochrome N, partial [Pinus sylvestris]
gi|410718190|gb|AFV79471.1| phytochrome N, partial [Pinus sylvestris]
gi|410718192|gb|AFV79472.1| phytochrome N, partial [Pinus sylvestris]
gi|410718194|gb|AFV79473.1| phytochrome N, partial [Pinus sylvestris]
gi|410718196|gb|AFV79474.1| phytochrome N, partial [Pinus sylvestris]
gi|410718198|gb|AFV79475.1| phytochrome N, partial [Pinus sylvestris]
gi|410718200|gb|AFV79476.1| phytochrome N, partial [Pinus sylvestris]
gi|410718202|gb|AFV79477.1| phytochrome N, partial [Pinus sylvestris]
gi|410718204|gb|AFV79478.1| phytochrome N, partial [Pinus sylvestris]
gi|410718206|gb|AFV79479.1| phytochrome N, partial [Pinus sylvestris]
gi|410718208|gb|AFV79480.1| phytochrome N, partial [Pinus sylvestris]
gi|410718210|gb|AFV79481.1| phytochrome N, partial [Pinus sylvestris]
gi|410718212|gb|AFV79482.1| phytochrome N, partial [Pinus sylvestris]
gi|410718216|gb|AFV79484.1| phytochrome N, partial [Pinus sylvestris]
gi|410718220|gb|AFV79486.1| phytochrome N, partial [Pinus sylvestris]
gi|410718224|gb|AFV79488.1| phytochrome N, partial [Pinus sylvestris]
gi|410718226|gb|AFV79489.1| phytochrome N, partial [Pinus sylvestris]
gi|410718228|gb|AFV79490.1| phytochrome N, partial [Pinus sylvestris]
gi|410718230|gb|AFV79491.1| phytochrome N, partial [Pinus sylvestris]
gi|410718232|gb|AFV79492.1| phytochrome N, partial [Pinus sylvestris]
gi|410718234|gb|AFV79493.1| phytochrome N, partial [Pinus sylvestris]
gi|410718236|gb|AFV79494.1| phytochrome N, partial [Pinus sylvestris]
gi|410718238|gb|AFV79495.1| phytochrome N, partial [Pinus sylvestris]
gi|410718240|gb|AFV79496.1| phytochrome N, partial [Pinus sylvestris]
gi|410718242|gb|AFV79497.1| phytochrome N, partial [Pinus sylvestris]
gi|410718244|gb|AFV79498.1| phytochrome N, partial [Pinus sylvestris]
gi|410718246|gb|AFV79499.1| phytochrome N, partial [Pinus sylvestris]
gi|410718248|gb|AFV79500.1| phytochrome N, partial [Pinus sylvestris]
gi|410718250|gb|AFV79501.1| phytochrome N, partial [Pinus sylvestris]
gi|410718252|gb|AFV79502.1| phytochrome N, partial [Pinus sylvestris]
gi|410718256|gb|AFV79504.1| phytochrome N, partial [Pinus sylvestris]
gi|410718262|gb|AFV79507.1| phytochrome N, partial [Pinus sylvestris]
gi|410718266|gb|AFV79509.1| phytochrome N, partial [Pinus sylvestris]
gi|410718274|gb|AFV79513.1| phytochrome N, partial [Pinus sylvestris]
gi|410718276|gb|AFV79514.1| phytochrome N, partial [Pinus sylvestris]
gi|410718282|gb|AFV79517.1| phytochrome N, partial [Pinus sylvestris]
gi|410718284|gb|AFV79518.1| phytochrome N, partial [Pinus sylvestris]
gi|410718288|gb|AFV79520.1| phytochrome N, partial [Pinus sylvestris]
gi|410718290|gb|AFV79521.1| phytochrome N, partial [Pinus sylvestris]
gi|410718292|gb|AFV79522.1| phytochrome N, partial [Pinus sylvestris]
gi|410718296|gb|AFV79524.1| phytochrome N, partial [Pinus sylvestris]
gi|410718306|gb|AFV79529.1| phytochrome N, partial [Pinus sylvestris]
gi|410718308|gb|AFV79530.1| phytochrome N, partial [Pinus sylvestris]
gi|410718310|gb|AFV79531.1| phytochrome N, partial [Pinus sylvestris]
gi|410718314|gb|AFV79533.1| phytochrome N, partial [Pinus sylvestris]
gi|410718316|gb|AFV79534.1| phytochrome N, partial [Pinus sylvestris]
gi|410718318|gb|AFV79535.1| phytochrome N, partial [Pinus sylvestris]
gi|410718324|gb|AFV79538.1| phytochrome N, partial [Pinus sylvestris]
gi|410718328|gb|AFV79540.1| phytochrome N, partial [Pinus sylvestris]
gi|410718330|gb|AFV79541.1| phytochrome N, partial [Pinus sylvestris]
gi|410718332|gb|AFV79542.1| phytochrome N, partial [Pinus sylvestris]
gi|410718336|gb|AFV79544.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 626/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|218683919|gb|ACL00913.1| phytochrome D [Erysimum capitatum]
Length = 635
Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/635 (77%), Positives = 535/635 (84%), Gaps = 34/635 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PA+SIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVV+SVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PAISIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEV+AESKR DLEPY GLHYPATDIPQA RFLFKQNRVRMIVDCHA+P+ V+QD+ L Q
Sbjct: 61 GEVIAESKRDDLEPYIGLHYPATDIPQAPRFLFKQNRVRMIVDCHASPVRVVQDDRLTQA 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA----VGGRSTTRLW----- 376
+CLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGN+E+ GGR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGNAVNTGGRNSMRLWGLVVC 180
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA Q++EK VLR QTLLCDMLLRDSPAG
Sbjct: 181 HHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAFQVAEKRVLRMQTLLCDMLLRDSPAG 240
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKC+GAA Y+GKYY LGV PTE QI DIVEWLL H DSTGLSTDSL
Sbjct: 241 IVTQSPSIMDLVKCNGAAFLYRGKYYSLGVAPTEAQISDIVEWLLANHSDSTGLSTDSLG 300
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP+AA LGD VCGMAVAYITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPR
Sbjct: 301 DAGYPRAAALGDVVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV----VNAQLVDLE 591
SSF+AFL VVKSR PW+ AEMDAIHSLQLILRDSF+++EA +SKA V D+
Sbjct: 361 SSFQAFLVVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAIDSKAAAAGAVQPHGEDMA 420
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
QG+ E+ +VAREMVRLIETAT PIFAVD+ GC+NGWNAK+AELTGLSV+EAMGKSLV D
Sbjct: 421 NQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVDEAMGKSLVRD 480
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
L+YKEYEE VD LL ALKG+E KNVE+KL+TFG E + KAVFV VN CSSKDY NNIVG
Sbjct: 481 LIYKEYEETVDRLLSCALKGDEGKNVEVKLKTFGPELQGKAVFVTVNTCSSKDYLNNIVG 540
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENT C EWNTAME LTG
Sbjct: 541 VCFVGQDVTGHKVVMDKFINIQGDYKAIMHSPNPLIPPIFAADENTHCLEWNTAMENLTG 600
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
W R ++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 601 WPRSEVIGKLLVKEVFGSCCRLKGPDALTKFMIVL 635
>gi|410718260|gb|AFV79506.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 625/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718334|gb|AFV79543.1| phytochrome N, partial [Pinus sylvestris]
gi|410718338|gb|AFV79545.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1013 bits (2619), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 626/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIESEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718346|gb|AFV79549.1| phytochrome N, partial [Pinus pinaster]
Length = 850
Score = 1013 bits (2619), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/844 (58%), Positives = 624/844 (73%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+G
Sbjct: 121 GIQLNKEVELAAQMREKRILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEG 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LG TPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGATPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSCKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKTVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMAGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKELEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P E WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-GEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNLDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718120|gb|AFV79436.1| phytochrome N, partial [Pinus sylvestris]
gi|410718166|gb|AFV79459.1| phytochrome N, partial [Pinus sylvestris]
gi|410718254|gb|AFV79503.1| phytochrome N, partial [Pinus sylvestris]
gi|410718264|gb|AFV79508.1| phytochrome N, partial [Pinus sylvestris]
gi|410718298|gb|AFV79525.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1013 bits (2619), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 626/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718140|gb|AFV79446.1| phytochrome N, partial [Pinus sylvestris]
gi|410718218|gb|AFV79485.1| phytochrome N, partial [Pinus sylvestris]
gi|410718268|gb|AFV79510.1| phytochrome N, partial [Pinus sylvestris]
gi|410718270|gb|AFV79511.1| phytochrome N, partial [Pinus sylvestris]
gi|410718278|gb|AFV79515.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 626/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHILEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718286|gb|AFV79519.1| phytochrome N, partial [Pinus sylvestris]
gi|410718294|gb|AFV79523.1| phytochrome N, partial [Pinus sylvestris]
gi|410718300|gb|AFV79526.1| phytochrome N, partial [Pinus sylvestris]
gi|410718302|gb|AFV79527.1| phytochrome N, partial [Pinus sylvestris]
gi|410718304|gb|AFV79528.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/844 (58%), Positives = 626/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L ++LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPL-NNLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718146|gb|AFV79449.1| phytochrome N, partial [Pinus sylvestris]
gi|410718170|gb|AFV79461.1| phytochrome N, partial [Pinus sylvestris]
gi|410718174|gb|AFV79463.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/844 (58%), Positives = 625/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +D CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDGCGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718128|gb|AFV79440.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/844 (58%), Positives = 625/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRHACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718132|gb|AFV79442.1| phytochrome N, partial [Pinus sylvestris]
gi|410718280|gb|AFV79516.1| phytochrome N, partial [Pinus sylvestris]
gi|410718312|gb|AFV79532.1| phytochrome N, partial [Pinus sylvestris]
gi|410718320|gb|AFV79536.1| phytochrome N, partial [Pinus sylvestris]
gi|410718322|gb|AFV79537.1| phytochrome N, partial [Pinus sylvestris]
gi|410718326|gb|AFV79539.1| phytochrome N, partial [Pinus sylvestris]
gi|410718340|gb|AFV79546.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/844 (58%), Positives = 625/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|218683905|gb|ACL00907.1| phytochrome D [Boechera laevigata]
Length = 630
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/631 (77%), Positives = 532/631 (84%), Gaps = 31/631 (4%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVESVR LTGY RVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYHRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEV+AESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+P+ V+QD+ L Q
Sbjct: 61 GEVIAESKRYDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA----VGGRSTTRLW----- 376
+CLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGN+E+ GGR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGNCVNTGGRNSMRLWGLVVC 180
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSPAG
Sbjct: 181 HHKSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAG 240
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQ PSIMDLVKC+GAA YQGKYYPLGV PTE QI DIV WLL H DSTGLSTDSL
Sbjct: 241 IVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDIVMWLLANHSDSTGLSTDSLG 300
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
D GYP AA LGDAVCGMAVAYITKRDFLFW+RSHT KEIKWGGAKHHPEDKDDGQRMHPR
Sbjct: 301 DVGYPGAAALGDAVCGMAVAYITKRDFLFWYRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSF+AFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++EA+ + A V D+ QG+
Sbjct: 361 SSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAAAAGA-VQTHGEDIAEQGM 419
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
E+ +VAREMVRLIETA PIFAVD+ GC+NGWNAK+AELT LSVE AMGKSLV DL+YK
Sbjct: 420 QEIGAVAREMVRLIETAAVPIFAVDIDGCINGWNAKIAELTCLSVEGAMGKSLVRDLIYK 479
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
EYEE VD LL ALKG+E KNVE+KL++FG E + KAVFVV+NACSSKDY NNIVGVCF+
Sbjct: 480 EYEETVDRLLSCALKGDEGKNVEVKLKSFGPELQGKAVFVVINACSSKDYLNNIVGVCFI 539
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
GQDVT K+VMDKFI+IQ DYKA +HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW R
Sbjct: 540 GQDVTGYKIVMDKFINIQSDYKATIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRS 599
Query: 776 DIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 600 EVIGKLLVREVFGSCCRLKGPDALTKFMIVL 630
>gi|406685541|gb|AFS51211.1| phytochrome P, partial [Phyllocladus hypophyllus]
Length = 661
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/661 (73%), Positives = 557/661 (84%), Gaps = 34/661 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------I 138
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVPN++ + +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 139 LTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDL 198
LTIGTDVR+LFT +S+ L+KA A+EI+L+NPIW+HS+ TGKPFYAI+HR+DVG+VIDL
Sbjct: 61 LTIGTDVRSLFTVASARALQKASMAQEISLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDL 120
Query: 199 EPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVY 258
EP RT D ALS AGAVQSQ+LAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY
Sbjct: 121 EPVRTGDAALSAAGAVQSQRLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 259 RFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQ 318
+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYQGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 319 DEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW 376
E L QPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKLW 300
Query: 377 --------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLR
Sbjct: 301 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 360
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
D+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL YHGDSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSLADAGYP AA+LGDAVCGMA A IT DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDL 590
RMHPRSSFKAFLEVVK RS PW+N EMDAIHSLQLILR SF+D E SN+K +V+ +L DL
Sbjct: 481 RMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIEDSNTKTMVHTRLNDL 540
Query: 591 ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVH 650
+LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL+V EAMGKSLVH
Sbjct: 541 KLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLAVGEAMGKSLVH 600
Query: 651 DLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
DLV++E E VD +L+ AL+GEE++NVEIKLRTFG + +K+A+++VVNACSS+DYT+NIV
Sbjct: 601 DLVFEESAESVDKILYRALRGEEEQNVEIKLRTFGPQKQKEAIYLVVNACSSRDYTDNIV 660
Query: 711 G 711
G
Sbjct: 661 G 661
>gi|410718258|gb|AFV79505.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1010 bits (2612), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/844 (58%), Positives = 625/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG LP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPWLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|410718148|gb|AFV79450.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1010 bits (2612), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/844 (58%), Positives = 625/844 (74%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
I+L+ G+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA +KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALFQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|406685529|gb|AFS51205.1| phytochrome P, partial [Pherosphaera fitzgeraldii]
Length = 660
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/660 (73%), Positives = 555/660 (84%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ-----EIL 139
AYLS++QRGG IQPFGC + V+E F++IAYS+NA EML L PQSVP+++ + +L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLTVEETNFKIIAYSQNALEMLDLMPQSVPSMDSKLGAGGAVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVR+LFT SSS LEKAF A +I+L+NPIWIHS+ TGKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRSLFTPSSSRALEKAFMAPDISLMNPIWIHSQYTGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA--VGGRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYM+NMGSIASLA+AV+INGNDEE GGRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMSNMGSIASLAMAVVINGNDEEGGGTGGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY + LGVTP+E QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGATTWCLGVTPSEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AA+LGDAVCGMA A IT RDFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAM KSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMSKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
LV +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT+NIVG
Sbjct: 601 LVLEESAESVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNIVG 660
>gi|218683935|gb|ACL00921.1| phytochrome D [Malcolmia africana]
Length = 633
Score = 1008 bits (2607), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/633 (77%), Positives = 538/633 (84%), Gaps = 32/633 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVV+SVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRGLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEV+AESKR DLEPY GLHYPATDIPQASRFLFKQNRVRM+VDC A+P+ V+QD+ L Q
Sbjct: 61 GEVIAESKREDLEPYIGLHYPATDIPQASRFLFKQNRVRMVVDCSASPVRVVQDDRLAQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA---VGGRSTTRLW------ 376
+CLVGSTLRAPHGCHAQYMANMG+ ASLA+AVIIN N+ + GR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGTTASLAMAVIINXNEXDGSXGAXGRNSMRLWGLVVCH 180
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSPAG
Sbjct: 181 HTSASRCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAG 240
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKC+GAA YQGKYY LGV P+E QI +IVEWLL H DSTGLSTDSL+
Sbjct: 241 IVTQSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQIHEIVEWLLAKHSDSTGLSTDSLS 300
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP+AA LGDAVCGMAVAYITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPR
Sbjct: 301 DAGYPEAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV-VNAQLVDLELQG 594
SSFKAFLEVVKSR PW+ AEMDAIHSLQLILRDSF++A A+ + V + D+ QG
Sbjct: 361 SSFKAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKEAAAAAAAGVAIQPHGEDMTEQG 420
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+DE+ +VAREMVRLIETAT PIFAVD+ GC+NGWNAK+AELT LSVEEAMGKSLV DL+Y
Sbjct: 421 MDEVGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTCLSVEEAMGKSLVRDLIY 480
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR-KKAVFVVVNACSSKDYTNNIVGVC 713
KEYEE VD LL +ALKGEE KNVE+KL+TFGA + K+AVFVVVNACSSKDY NNI+GVC
Sbjct: 481 KEYEETVDKLLSNALKGEEGKNVEVKLKTFGAMVQGKEAVFVVVNACSSKDYLNNIIGVC 540
Query: 714 FVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWS 773
FVG+DVT +K VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW
Sbjct: 541 FVGKDVTSEKFVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWP 600
Query: 774 RGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
R ++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 601 RSEVIGKLLVKEVFGSCCRLKGPDALTKFMIVL 633
>gi|406685525|gb|AFS51203.1| phytochrome P, partial [Manoao colensoi]
Length = 657
Score = 1008 bits (2606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/657 (73%), Positives = 554/657 (84%), Gaps = 29/657 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-KQEILTIGT 143
AYLS++QRGG IQPFGC +AV+E F+VIAYS+NA EML + PQSVPN++ + +LTIGT
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKVIAYSQNALEMLDIMPQSVPNMDLGKPVLTIGT 60
Query: 144 DVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPART 203
DVRTLFT +S+ LEKA +EI+L+NPIW+HS++TGKPFYAI+HR+DVG+VIDLEP RT
Sbjct: 61 DVRTLFTPASARALEKAAMTQEISLMNPIWVHSQHTGKPFYAIVHRIDVGMVIDLEPLRT 120
Query: 204 EDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHED 263
D ++S AGAVQSQKLAVRAIS+LQSLP GDI +LCD+VVE VR+LTGYDRVM Y+FHED
Sbjct: 121 GDASMSAAGAVQSQKLAVRAISRLQSLPAGDIGVLCDSVVEDVRELTGYDRVMAYKFHED 180
Query: 264 EHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLM 323
EHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A P+ VIQ E +
Sbjct: 181 EHGEVVAEMRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIFDCSANPVQVIQSEKMR 240
Query: 324 QPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW----- 376
+PLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 RPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGAGTSGRSSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMEL LA+QL+EKH+LRTQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELHLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE Q+KDI +WLL YHGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGTTWSLGVTPTEAQVKDIADWLLEYHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K +V+A+L DL+LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V E MGKSLVHDLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGETMGKSLVHDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
E E V +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVGV
Sbjct: 601 ESAESVQKMLYRALRGEEEKNVEIKLRTFGPQKQKEAIYLVVNACSSRDYTENIVGV 657
>gi|406685579|gb|AFS51230.1| phytochrome P, partial [Podocarpus macrophyllus]
Length = 661
Score = 1008 bits (2606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/661 (73%), Positives = 552/661 (83%), Gaps = 33/661 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ +IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
Query: 712 V 712
V
Sbjct: 661 V 661
>gi|218683921|gb|ACL00914.1| phytochrome D [Erysimum capitatum]
Length = 635
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/635 (77%), Positives = 534/635 (84%), Gaps = 34/635 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PA+SIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PAISIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEV+AESKR DLEPY GLHYPATDIP ASRFLFKQNRVRMIVDCHA+P+ V+QD+ L Q
Sbjct: 61 GEVIAESKRDDLEPYIGLHYPATDIPHASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA----VGGRSTTRLW----- 376
+CLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGN+E+ GGR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGNAVNTGGRNSMRLWGLVVC 180
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQL+MELQLA Q++EK VLR QTLLCDMLLRDSPAG
Sbjct: 181 HHTSARCIPFPLRYACEFLMQAFGLQLSMELQLAFQVAEKRVLRMQTLLCDMLLRDSPAG 240
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKC+GAA Y+GKYY LGV PTE QI DIVEWLL H DSTGLSTDSL
Sbjct: 241 IVTQSPSIMDLVKCNGAAFLYKGKYYSLGVVPTEAQISDIVEWLLANHSDSTGLSTDSLG 300
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP+AA LGDAVCGMAVAYITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPR
Sbjct: 301 DAGYPRAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA----VVNAQLVDLE 591
SSF+AFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++EA +SKA V D+
Sbjct: 361 SSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGEDMA 420
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
QG+ E+ +VAREMVRLIETAT PIFAVD+ GC+NGWNAK+ ELT LSV+EAMGKSLV D
Sbjct: 421 DQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKITELTSLSVDEAMGKSLVCD 480
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
L+YKEYE IVD LL ALKG+E KNVE+KL+TFG E + KAVFVVVN CSSKDY NNIVG
Sbjct: 481 LIYKEYEVIVDRLLSCALKGDEGKNVEVKLKTFGPELQGKAVFVVVNTCSSKDYLNNIVG 540
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
V FVGQDVT K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENT C EWNTAME LTG
Sbjct: 541 VSFVGQDVTGHKVVMDKFINIQGDYKAIMHSPNPLIPPIFAADENTHCLEWNTAMENLTG 600
Query: 772 WSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
W R ++IGK+LV EVFGSCCRLKGPDALTK MI L
Sbjct: 601 WPRSEVIGKLLVKEVFGSCCRLKGPDALTKLMIVL 635
>gi|406685555|gb|AFS51218.1| phytochrome P, partial [Podocarpus chingianus]
Length = 660
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/660 (74%), Positives = 551/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685559|gb|AFS51220.1| phytochrome P, partial [Podocarpus costalis]
Length = 660
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/660 (74%), Positives = 551/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHCSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685545|gb|AFS51213.1| phytochrome P, partial [Podocarpus lawrencei]
Length = 660
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/660 (73%), Positives = 553/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT+SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTASSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIP+ASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E ++ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685589|gb|AFS51235.1| phytochrome P, partial [Podocarpus polyspermus]
Length = 660
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/660 (73%), Positives = 551/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NP+W+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|218683927|gb|ACL00917.1| phytochrome D [Aethionema oppositifolium]
Length = 634
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/634 (76%), Positives = 535/634 (84%), Gaps = 33/634 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAV SQKLAVRAIS LQSLPGGDIKLLCDTVVE VR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVHSQKLAVRAISHLQSLPGGDIKLLCDTVVERVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+P+ V+QD+ L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTRLW------ 376
+CLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGN+E+ + GGR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNEEDGNSSGGGRNSLRLWGLVVCH 180
Query: 377 --------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSPAGI
Sbjct: 181 HTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGI 240
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
VTQSPSIMDLVKC+GAA Y G+YY LGV P+E QI DIVEWLL H DSTGLSTDSL D
Sbjct: 241 VTQSPSIMDLVKCNGAAFLYHGRYYSLGVAPSEAQINDIVEWLLANHSDSTGLSTDSLGD 300
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AGYP+A LGDAVCGMAVA+ITKRDFLFWFRS T KEIKWGGAKHHPEDKDDGQRMHPRS
Sbjct: 301 AGYPRAPALGDAVCGMAVAFITKRDFLFWFRSQTEKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV----VNAQLVDLEL 592
SFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA +SKA+ V +L
Sbjct: 361 SFKAFLEVVKSRSQPWEAAEMDAIHSLQLILRDSFKESEAMDSKAIAATSVQPHGENLTE 420
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QG++E+ +VAREMVRLIETA PIFAVD+ GC+NGWNAK+AE+TGLSV EAMGKSLV DL
Sbjct: 421 QGMEEIGAVAREMVRLIETAAVPIFAVDIDGCINGWNAKIAEMTGLSVGEAMGKSLVCDL 480
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
+YKEYE+ VD LL ALKG+E KNVE+KL+TFG + KAVFVVVNACSSKDY NIVGV
Sbjct: 481 IYKEYEQAVDMLLSRALKGDEGKNVEVKLKTFGPGLQGKAVFVVVNACSSKDYLKNIVGV 540
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
FVGQDVT QK+VMDKFI+IQGDYKAI++SPNPLIPPIFA+DENTCC EWNTAMEKLTGW
Sbjct: 541 GFVGQDVTSQKIVMDKFINIQGDYKAIINSPNPLIPPIFAADENTCCIEWNTAMEKLTGW 600
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
R ++IGK+LV EVFGSCCRL+GPD LTKFMI L
Sbjct: 601 PRSEVIGKLLVKEVFGSCCRLRGPDELTKFMIVL 634
>gi|406685571|gb|AFS51226.1| phytochrome P, partial [Podocarpus guatemalensis]
Length = 660
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/660 (74%), Positives = 551/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EMLGL PQSVP +E E L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLGLMPQSVPTMELGKHGGGEAL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+V+ LE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVGLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685565|gb|AFS51223.1| phytochrome P, partial [Podocarpus drouynianus]
Length = 660
Score = 1006 bits (2602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/660 (74%), Positives = 551/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMV++
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVFK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVGCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685575|gb|AFS51228.1| phytochrome P, partial [Podocarpus longifoliolatus]
Length = 660
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 552/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NP+W+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI +LCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGMLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSSTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685595|gb|AFS51238.1| phytochrome P, partial [Podocarpus rubens]
Length = 660
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/660 (73%), Positives = 551/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGY+RVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685593|gb|AFS51237.1| phytochrome P, partial [Podocarpus ramosii]
Length = 660
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/660 (73%), Positives = 551/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGY+RVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 SVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685649|gb|AFS51265.1| phytochrome P, partial [Pinus strobus]
Length = 656
Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/656 (74%), Positives = 556/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEK--QEILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ QE+LTIG
Sbjct: 1 AYLSRIQRGGIIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQSQQEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRT FT++SS LEKA +EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VIDLEP R
Sbjct: 61 TDVRTQFTAASSHSLEKAAVTQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVV E +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVFEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGND+E G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLR +P G
Sbjct: 301 HHTSPRPVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRHAPMG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY GK + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGKCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DF+FWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFIFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V++QL DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSQLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +GCVNGWNAKVAELTGL V EAMG SLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGCVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+KNVE+ L+TFG + KKAV +VVNACSS+D+T+NIVG
Sbjct: 601 ESVESVEKMLYNALRGEEEKNVEMMLKTFGPQKEKKAVILVVNACSSRDFTDNIVG 656
>gi|218683941|gb|ACL00924.1| phytochrome D [Thlaspi perfoliatum]
Length = 631
Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/632 (76%), Positives = 538/632 (85%), Gaps = 32/632 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAV SQKLAVRAIS LQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVHSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEV+AESKR DLEPY GLHYPATDIPQASRFLF+Q+RVRMIVDCHA+P+ V+Q++ L Q
Sbjct: 61 GEVIAESKRDDLEPYIGLHYPATDIPQASRFLFRQSRVRMIVDCHASPVRVVQEDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRS-----TTRLW---- 376
+CLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGN+E+ G + + RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNEEDGNGVNNGGGRNSMRLWGLIV 180
Query: 377 ----------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPA 414
AFGLQLNMELQLA QL+EK VLR QTLLCDMLLRDSPA
Sbjct: 181 CHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQLAEKRVLRMQTLLCDMLLRDSPA 240
Query: 415 GIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSL 474
GIVTQSPSIMDLVKC+GAA YQGKYY LGV P+E QI +IVEWLL H DSTGL TDSL
Sbjct: 241 GIVTQSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQINEIVEWLLANHSDSTGLGTDSL 300
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
DAGYP+A+ LGDAVCGMAVAYITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHP
Sbjct: 301 GDAGYPRASVLGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHP 360
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA +S A+ A+ ++ QG
Sbjct: 361 RSSFKAFLEVVKSRSQPWEAAEMDAIHSLQLILRDSFKESEARDSIAIA-AERENMTEQG 419
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
++E+ +VAREMVRLIETA PIFAVD+ GC+NGWNAK+AELTGLSVEEAMGKS++ DL+Y
Sbjct: 420 MEEIGAVAREMVRLIETARVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSVIRDLIY 479
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCF 714
K+ EE VD LL ALKG+E +NVE+KL+TFG E + KAVFVVVNACSSKDY++NIVGVCF
Sbjct: 480 KDCEEAVDMLLSRALKGDEGENVEVKLKTFGPELQGKAVFVVVNACSSKDYSSNIVGVCF 539
Query: 715 VGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSR 774
VGQDVT QK+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENTCC EWNTAMEKLT WSR
Sbjct: 540 VGQDVTSQKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEKLTSWSR 599
Query: 775 GDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
+IGK+LV EVFGSCCRL+GPD LTKFMI L
Sbjct: 600 SQVIGKLLVKEVFGSCCRLRGPDELTKFMIVL 631
>gi|406685603|gb|AFS51242.1| phytochrome P, partial [Podocarpus spathoides]
Length = 660
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 551/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS+++RGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMRRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
+IGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 SIGTDVRTLFTPSSARALEKAVMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKELKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685561|gb|AFS51221.1| phytochrome P, partial [Podocarpus cunninghamii]
Length = 660
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/660 (73%), Positives = 551/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDD +R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDSRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E ++ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|218683907|gb|ACL00908.1| phytochrome D [Boechera laevigata]
Length = 630
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/631 (76%), Positives = 530/631 (83%), Gaps = 31/631 (4%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVES R LTGY RVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESXRDLTGYHRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEV+AESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+P+ V+QD+ L Q
Sbjct: 61 GEVIAESKRYDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA----VGGRSTTRLW----- 376
+CLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGN+E+ GGR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGNCVNTGGRNSMRLWGLVVC 180
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSPAG
Sbjct: 181 HHKSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAG 240
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQ PSIMDLVKC+GAA YQGKYYPLGV PTE QI DIV WLL H DSTGLST SL
Sbjct: 241 IVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDIVMWLLANHSDSTGLSTGSLG 300
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
D GYP AA LGDAVCGMAVAYITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPR
Sbjct: 301 DVGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSF+AFLEVVKSR PW+ AEMDAI SLQLILRDSF+++EA+ + AV D+ QG+
Sbjct: 361 SSFQAFLEVVKSRCQPWETAEMDAILSLQLILRDSFKESEAAAAGAV-QTHGEDIAEQGM 419
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
E+ +VAREMVRLIETA PIFAVD+ GC+NGWNAK+AELT LSVEEAMGKSLV DL+YK
Sbjct: 420 QEIGAVAREMVRLIETAAVPIFAVDIDGCINGWNAKIAELTCLSVEEAMGKSLVRDLIYK 479
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
EYEE VD LL ALKG+E KNVE+KL++FG E + KAV VV+NACSSKDY NNIVGVCF+
Sbjct: 480 EYEETVDRLLSCALKGDEGKNVEVKLKSFGPELQGKAVLVVINACSSKDYLNNIVGVCFI 539
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
GQDVT K+VMDKFI++Q DYKAI+HSPNPLIPPIFA+DENTCC EWNTA+EKLTGW R
Sbjct: 540 GQDVTGHKIVMDKFINVQSDYKAIIHSPNPLIPPIFAADENTCCLEWNTAIEKLTGWPRS 599
Query: 776 DIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
++IGK+LV EVFGSCCRLKGPDALTKFMI L
Sbjct: 600 EVIGKLLVREVFGSCCRLKGPDALTKFMIVL 630
>gi|406685549|gb|AFS51215.1| phytochrome P, partial [Podocarpus aristulatus]
gi|406685591|gb|AFS51236.1| phytochrome P, partial [Podocarpus purdieanus]
Length = 660
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/660 (74%), Positives = 550/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEAL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+V+DLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTVKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685509|gb|AFS51195.1| phytochrome P, partial [Dacrydium guillauminii]
Length = 660
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/660 (73%), Positives = 553/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQP GC +AV+E F++IA+S+NA EML L PQSVP++E E+L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GI+TQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDITEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
LV +E E V+ +L+ AL+GEE+KNVEIKLRTFG + K+A+++VVNACSS+DYT+NIVG
Sbjct: 601 LVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNACSSRDYTDNIVG 660
>gi|406685563|gb|AFS51222.1| phytochrome P, partial [Podocarpus dispermus]
Length = 660
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/660 (73%), Positives = 550/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QN VRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNGVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685601|gb|AFS51241.1| phytochrome P, partial [Podocarpus salomonensis]
Length = 660
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 550/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
+IGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 SIGTDVRTLFTPSSARALEKAVMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTAWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKELKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDGSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAGCVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685569|gb|AFS51225.1| phytochrome P, partial [Podocarpus fasciculus]
Length = 660
Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 550/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ +IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ L+ AL+GEE+KNVEI+LRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKTLYRALRGEEEKNVEIRLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685511|gb|AFS51196.1| phytochrome P, partial [Dacrydium nausoriense]
Length = 660
Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/660 (73%), Positives = 552/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQP GC +AV+E F++IA+S+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPTMELGKLGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GI+TQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
LV +E E V+ +L+ AL+GEE+KNVEIKLRTFG + K+A+++VVNACSS+DYT+NIVG
Sbjct: 601 LVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNACSSRDYTDNIVG 660
>gi|406685551|gb|AFS51216.1| phytochrome P, partial [Podocarpus bracteatus]
Length = 660
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 549/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGY+RVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPAKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LG TPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGATPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685667|gb|AFS51274.1| phytochrome P, partial [Tsuga sieboldii]
Length = 656
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/656 (74%), Positives = 558/656 (85%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LE+A A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID+EP R
Sbjct: 61 TDVRTLFTAASAHSLERAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDIEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGND+EA G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYAREFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D S +K +V+A+L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDINDSGTKTMVHARLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPIXAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+KNVE+ LRTFG + +K+AVF+VVNACSS+D+T+NIVG
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685547|gb|AFS51214.1| phytochrome P, partial [Podocarpus archboldii]
Length = 660
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 550/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGY+RVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLSA 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685577|gb|AFS51229.1| phytochrome P, partial [Podocarpus lucienii]
Length = 660
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 550/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ +IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT + FLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKGFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685513|gb|AFS51197.1| phytochrome P, partial [Dacrydium xanthandrum]
Length = 660
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 552/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IA+S+NA EML L PQSVP++E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+ +NPIW+HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARGLEKAAMAPDISFMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GI+TQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
LV +E E V+ +L+ AL+GEE+KNVEIKLR FG + K+A+++VVNACSS+DYT+NIVG
Sbjct: 601 LVLEESAECVEKMLYRALRGEEEKNVEIKLRIFGTQKEKEAIYLVVNACSSRDYTDNIVG 660
>gi|406685489|gb|AFS51185.1| phytochrome P, partial [Acmopyle sahniana]
Length = 659
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/659 (74%), Positives = 551/659 (83%), Gaps = 32/659 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE----KQEILT 140
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E +LT
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGSVLT 60
Query: 141 IGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP 200
IGTDVRTLFT S + LEKA A +I+L+NPIW+HS+ TGKPF AI+HR+DVGIVIDLEP
Sbjct: 61 IGTDVRTLFTPSGARALEKAAMAPDISLMNPIWVHSQYTGKPFNAIVHRIDVGIVIDLEP 120
Query: 201 ARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRF 260
RT D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+F
Sbjct: 121 LRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYKF 180
Query: 261 HEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDE 320
HEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E
Sbjct: 181 HEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQSE 240
Query: 321 GLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW-- 376
L QP CLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 ELRQPFCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLWGL 300
Query: 377 ------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 412
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+
Sbjct: 301 VVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 360
Query: 413 PAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTD 472
P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLSTD
Sbjct: 361 PIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLSTD 420
Query: 473 SLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 532
SLADAGYP AA LGDAVCGMA A IT +D+LFW+RSHTAKE+KWGGAKHHP+DKDDG+RM
Sbjct: 421 SLADAGYPGAALLGDAVCGMAAARITSKDYLFWYRSHTAKEMKWGGAKHHPDDKDDGRRM 480
Query: 533 HPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLEL 592
HPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+L
Sbjct: 481 HPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKL 540
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHDL
Sbjct: 541 QGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHDL 600
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT+NIVG
Sbjct: 601 VLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNIVG 659
>gi|406685503|gb|AFS51192.1| phytochrome P, partial [Dacrycarpus compactus]
Length = 661
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/661 (73%), Positives = 552/661 (83%), Gaps = 33/661 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG +QPFGC +AV+E F++IAYS+NA EML L PQSVP++E E+L
Sbjct: 1 AYLSRMQRGGTLQPFGCMVAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DV +VIDLE
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVM YR
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHG+VVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGDVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELT L V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E VD +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT+NIVG
Sbjct: 601 IVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNIVG 660
Query: 712 V 712
V
Sbjct: 661 V 661
>gi|406685583|gb|AFS51232.1| phytochrome P, partial [Podocarpus neriifolius]
Length = 660
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 550/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGY+RVMVY+
Sbjct: 121 PRRTGGAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685553|gb|AFS51217.1| phytochrome P, partial [Podocarpus brassii]
Length = 660
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 550/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGY+RVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADA YP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADASYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESVECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685605|gb|AFS51243.1| phytochrome P, partial [Podocarpus spinulosus]
Length = 660
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/660 (73%), Positives = 550/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGVVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P + D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRGSGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + +GVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCVGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685611|gb|AFS51246.1| phytochrome P, partial [Prumnopitys andina]
Length = 661
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/661 (72%), Positives = 555/661 (83%), Gaps = 34/661 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------I 138
AYLS++QRGG IQPFGCT+AV+E F++IAYS+NA EML L PQSVPN++ + +
Sbjct: 1 AYLSRMQRGGTIQPFGCTLAVEETGFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 139 LTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDL 198
L IGTDVRTLFT +S+ LEKA REI+L+NPIW+HS+ TGKPFYAI+HR+DVGIVIDL
Sbjct: 61 LAIGTDVRTLFTPASARALEKAAMGREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 199 EPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVY 258
EP RT D A+S AGAVQSQKLAVRAIS+LQSLP GD+ LLCDTVVE VR+LTGYDRVMVY
Sbjct: 121 EPVRTGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDVGLLCDTVVEDVRELTGYDRVMVY 180
Query: 259 RFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQ 318
+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNR+RMI DC A P+ V+Q
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRMRMICDCSAAPVKVVQ 240
Query: 319 DEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW 376
E L QPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGNDEE G GR + +LW
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDEEGGGTSGRISMKLW 300
Query: 377 --------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
AFGLQLNMELQLA+Q++EKH+LRTQTLLCDMLLR
Sbjct: 301 GLVVCHHTSPRAVPFSLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLR 360
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
D+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL YHGDSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSLADAG+P AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+
Sbjct: 421 TDSLADAGHPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDL 590
RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K +V+A+L D+
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDM 540
Query: 591 ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVH 650
+LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLV
Sbjct: 541 KLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQ 600
Query: 651 DLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
DLV++E E V+ +L+ AL+G+E+KNVE+KLRTFG + +K+A+++VVNACSS+DYT+NIV
Sbjct: 601 DLVFEESHESVEKMLYRALRGDEEKNVEVKLRTFGPQKQKEAIYLVVNACSSRDYTDNIV 660
Query: 711 G 711
G
Sbjct: 661 G 661
>gi|406685499|gb|AFS51190.1| phytochrome P, partial [Dacrycarpus cinctus]
gi|406685501|gb|AFS51191.1| phytochrome P, partial [Dacrycarpus kinabaluensis]
Length = 660
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/660 (73%), Positives = 551/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG +QPFGC +AV+E F++IAYS+NA EML L PQSVP++E E+L
Sbjct: 1 AYLSRMQRGGTLQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DV +VIDLE
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVM YR
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELT L V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E VD +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT+NIVG
Sbjct: 601 IVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNIVG 660
>gi|406685505|gb|AFS51193.1| phytochrome P, partial [Dacrycarpus imbricatus]
Length = 661
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/661 (73%), Positives = 552/661 (83%), Gaps = 33/661 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG +QPFGC +AV+E F++IAYS+NA EML L PQSVP++E E+L
Sbjct: 1 AYLSRMQRGGTLQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DV +VIDLE
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVM YR
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNM+LQLA+Q++EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMQLQLAAQMTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELT L V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E VD +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT+NIVG
Sbjct: 601 IVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNIVG 660
Query: 712 V 712
V
Sbjct: 661 V 661
>gi|406685507|gb|AFS51194.1| phytochrome P, partial [Dacrydium balansae]
Length = 660
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/660 (73%), Positives = 552/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQP GC +AV+E F++IA+S+NA EML L PQSVP++E E+L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GI+TQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
LV +E E V+ +L+ AL+GEE+KNVEIKLRTFG + K+A+++VVNACS +DYT+NIVG
Sbjct: 601 LVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGIQKEKEAIYLVVNACSCRDYTDNIVG 660
>gi|406685615|gb|AFS51248.1| phytochrome P, partial [Prumnopitys ladei]
Length = 662
Score = 1002 bits (2591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/662 (72%), Positives = 555/662 (83%), Gaps = 34/662 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------I 138
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVPN++ + +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEEMGFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 139 LTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDL 198
LT GTDVRTLFT +S+ LEKA AREI+L+NPIW+HS+ TGKPFYAI+HR+DVGIVIDL
Sbjct: 61 LTTGTDVRTLFTPASARALEKAAMAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 199 EPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVY 258
EP R D +S AGAVQSQKL+VRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY
Sbjct: 121 EPVRMGDATMSAAGAVQSQKLSVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 259 RFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQ 318
+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V+Q
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVVQ 240
Query: 319 DEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW 376
E L QP+CLVGSTLRAPHGCHAQYMANMGSIASL +AVIING+DEE G GR + +LW
Sbjct: 241 SEELRQPICLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGDDEEGGGTSGRVSMKLW 300
Query: 377 --------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLR
Sbjct: 301 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 360
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
D+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL YHGDSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDL 590
RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K +V+A+L D+
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDI 540
Query: 591 ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVH 650
+LQG+DEL+SVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVH
Sbjct: 541 KLQGIDELTSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVH 600
Query: 651 DLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
DLV++E E V+ +L+ AL+G+E+KNVE+KLRTFG + +K+A+++V NACSS+DYT+NIV
Sbjct: 601 DLVFEESAESVEKMLYRALRGDEEKNVEVKLRTFGPQKQKEAIYLVANACSSRDYTDNIV 660
Query: 711 GV 712
GV
Sbjct: 661 GV 662
>gi|406685653|gb|AFS51267.1| phytochrome P, partial [Pseudolarix amabilis]
Length = 656
Score = 1002 bits (2591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/656 (74%), Positives = 555/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEEITFRIIAYSENAVEMLDLAPQSVPSMEQPQPETLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+LLNPIW+H KN+ KPFYAI+HR+DVG+VID EP R
Sbjct: 61 TDVRTLFTAASAHSLEKAALAQEISLLNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYM+NMGS+ASL +AVIINGND+EA G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMSNMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTP E QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPAEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAATLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SFRD + S +K +V+A+L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSGTKTMVHARLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDPNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L+ AL+GEE+KNVE+ LRTFG + +K+AVF+VVNACSS+D T+NIVG
Sbjct: 601 ESVERVEKMLYDALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDVTDNIVG 656
>gi|406685617|gb|AFS51249.1| phytochrome P, partial [Retrophyllum comptonii]
Length = 661
Score = 1001 bits (2587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/661 (73%), Positives = 549/661 (83%), Gaps = 33/661 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC + V+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP DI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTCDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPMRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + L VTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLAVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP A TLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGATTLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
Query: 712 V 712
V
Sbjct: 661 V 661
>gi|406685619|gb|AFS51250.1| phytochrome P, partial [Retrophyllum minus]
Length = 660
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/660 (73%), Positives = 548/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG I PFGC + V+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGXIXPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GI+TQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP A TLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGATTLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSXDYTENIVG 660
>gi|406685643|gb|AFS51262.1| phytochrome P, partial [Picea breweriana]
Length = 656
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/656 (74%), Positives = 556/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E+LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP +
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI+LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGND+E G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAAFLGDAVCGMASATITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L L LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNILRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L +AL+GEE+KNVE+ LRTFG + +K+AVF+VVNACSS+D+T+NIVG
Sbjct: 601 ESVERVEKMLCNALRGEEEKNVEMILRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685647|gb|AFS51264.1| phytochrome P, partial [Picea mariana]
Length = 656
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/656 (74%), Positives = 556/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E+LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP +
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI+LLCD+VVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGND+E G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT ++FLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DLV +
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVLE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V +L +A++GEE+KNVE+ LRTFG + +K+AVF+VVNACSS+D+TNNIVG
Sbjct: 601 ESVERVKKMLCNAIRGEEEKNVEMILRTFGPQKQKEAVFLVVNACSSRDFTNNIVG 656
>gi|406685621|gb|AFS51251.1| phytochrome P, partial [Saxegothaea conspicua]
Length = 661
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/661 (73%), Positives = 548/661 (82%), Gaps = 34/661 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E FR+IAYSENA EML L PQSVP +E +L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFRIIAYSENALEMLDLMPQSVPTMELGRHGGGAVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLF SS+ +EKA A +I L+NPIW+HS+ TGKPFYAI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFIPSSARAIEKAAMAPDINLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D ++S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PVRTGDASMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYP+TDIPQASRFLF QNRVRMI DC TP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPSTDIPQASRFLFMQNRVRMICDCSTTPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG---GRSTTRLW 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASLA+AVIINGNDEE G GRST +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEEGGGTTSGRSTMKLW 300
Query: 377 --------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
AFGLQLNME+QLA+QL+EKH+L TQTLLCDMLLR
Sbjct: 301 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMEVQLAAQLTEKHILWTQTLLCDMLLR 360
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
D+P GIV+QSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLS
Sbjct: 361 DAPIGIVSQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLS 420
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSLADAGYP AA+LGDAVCGMA A IT RDFLFWFRSHTAKE+KWGGAKHHP+DKDDG+
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDL 590
RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+ +L DL
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHTRLNDL 540
Query: 591 ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVH 650
+LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWN KVAELTGL V EAMGKSLVH
Sbjct: 541 KLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNVKVAELTGLPVGEAMGKSLVH 600
Query: 651 DLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
DLV++E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++V NACSS DYT+NIV
Sbjct: 601 DLVFQESAESVEKMLYRALRGEEEKNVEIKLRTFGPQKQKEAIYLVANACSSLDYTDNIV 660
Query: 711 G 711
G
Sbjct: 661 G 661
>gi|406685515|gb|AFS51198.1| phytochrome P, partial [Dacrydium elatum]
Length = 660
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/660 (73%), Positives = 552/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IA+S+NA EML L PQSVP++E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT S + LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSGARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRV+VY+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVVVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLAEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GI+TQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
LV +E E V+ +L+ AL+GEE+KNVEIKLRTFG + K+A+++VVNA SS+DYT+NIVG
Sbjct: 601 LVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNAGSSRDYTDNIVG 660
>gi|406685587|gb|AFS51234.1| phytochrome P, partial [Podocarpus oleifolius]
Length = 660
Score = 998 bits (2581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/660 (73%), Positives = 549/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFL QNRVRMI DC ATP+ +IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLSMQNRVRMICDCSATPVKMIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+ING+DEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGDDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
M PRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MRPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685665|gb|AFS51273.1| phytochrome P, partial [Tsuga heterophylla]
Length = 656
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/656 (74%), Positives = 555/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP R
Sbjct: 61 TDVRTLFTAASAHSLEKAAMAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+L GYDRVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELAGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGND+EA G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGV PTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVAPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT ++FLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKNFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK SLPWDN E+DAIHSLQLILR SF+D + S +K +V+A+L DL LQG+
Sbjct: 481 SSFKAFLEVVKRGSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+KNVE+ LRTFG + +K+AVF+VVNACSS+D+T+NIVG
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685635|gb|AFS51258.1| phytochrome P, partial [Larix decidua]
Length = 655
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/656 (74%), Positives = 558/656 (85%), Gaps = 30/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP +
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGY+RVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGND+E G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+KNVE+ LRTFG + +++AVF+VVNACSS+D+T+NIVG
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQ-KQEAVFLVVNACSSRDFTDNIVG 655
>gi|406685663|gb|AFS51272.1| phytochrome P, partial [Tsuga diversifolia]
Length = 656
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/656 (74%), Positives = 554/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT+ S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP R
Sbjct: 61 TDVRTLFTAPSAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHG VVAE +R DLEPY GLHYPATDIPQA RFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGVVVAEIRRSDLEPYLGLHYPATDIPQAFRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGND+EA G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D S +K +V+A+L D+ LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDINDSGTKTMVHARLNDMRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+KNVE+ LRTFG + +K+AVF+VVNACSS+D+T+NIVG
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685637|gb|AFS51259.1| phytochrome P, partial [Larix gmelinii]
Length = 655
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/656 (73%), Positives = 557/656 (84%), Gaps = 30/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEK A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP +
Sbjct: 61 TDVRTLFTAASAHSLEKVAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGY+RVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGND+E G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFSLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+KNVE+ LRTFG + +++AVF+VVNACSS+D+T+NIVG
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQ-KQEAVFLVVNACSSRDFTDNIVG 655
>gi|406685641|gb|AFS51261.1| phytochrome P, partial [Larix laricina]
Length = 655
Score = 996 bits (2576), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/656 (73%), Positives = 559/656 (85%), Gaps = 30/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG +QPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E+LTIG
Sbjct: 1 AYLSRIQRGGRMQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP +
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGY+RVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGND+E G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+ E V+ +L++AL+GEE+KNVE+ LRTFG + +++AVF+VVNACSS+D+T+NIVG
Sbjct: 601 QSVERVEKMLYNALRGEEEKNVEMMLRTFGPQ-KQEAVFLVVNACSSRDFTDNIVG 655
>gi|406685655|gb|AFS51268.1| phytochrome P, partial [Pseudotsuga menziesii]
Length = 656
Score = 996 bits (2575), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/656 (73%), Positives = 556/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E+LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP +
Sbjct: 61 TDVRTLFTAASANSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ +IQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKLIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGND+E G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT ++FLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RS PWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSFPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAM SLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMSMSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E + V+ +L++AL+GEE+KNVE+ LRTFG + +K+AVF+VVNACSS+D+T+NIVG
Sbjct: 601 ESVQRVEKMLNNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685659|gb|AFS51270.1| phytochrome P, partial [Tsuga caroliniana]
Length = 656
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/656 (73%), Positives = 554/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LE+A A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP R
Sbjct: 61 TDVRTLFTAASAHSLERAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGND+EA G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLST SLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTGSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG++MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRKMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V A+L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVRARLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DE SSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DLV++
Sbjct: 541 DERSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+G+E+KNVE+ LRTFG + +K+AVF+VVNACSS+D+T NIVG
Sbjct: 601 ESVERVEKMLYNALRGQEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685527|gb|AFS51204.1| phytochrome P, partial [Microcachrys tetragona]
Length = 657
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/657 (73%), Positives = 551/657 (83%), Gaps = 30/657 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE--KQEILTIG 142
AYLS++QRGG IQPFGC +AV+E F++IA+S+NA EML L PQSVP +E K +LTIG
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPTMEVGKGAVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ T KPF AI+HR+DVGIVIDLEP R
Sbjct: 61 TDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYTRKPFNAIVHRIDVGIVIDLEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D A+S AGAVQSQKLAVRAIS+ QSLP GD+ LLCDTVVE VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAAMSTAGAVQSQKLAVRAISRPQSLPSGDVGLLCDTVVEDVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMIYDCTATPVNVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW---- 376
QPLCLVGSTLRAPH CHAQYMANMGSIASL +AVIINGND+E G GRS+ +LW
Sbjct: 241 RQPLCLVGSTLRAPHRCHAQYMANMGSIASLVMAVIINGNDDEGGGTSGRSSMKLWGLVV 300
Query: 377 ----------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPA 414
AFGLQLNMELQLA+Q +EKH+LRTQTLLCDMLLRD+P
Sbjct: 301 CHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQWTEKHILRTQTLLCDMLLRDAPI 360
Query: 415 GIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSL 474
GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL +HGDSTGLSTDSL
Sbjct: 361 GIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLQHHGDSTGLSTDSL 420
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
ADAGYP AA+LGDAVCGMA A IT RDFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHP
Sbjct: 421 ADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHP 480
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+LQG
Sbjct: 481 RSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSHTKTMVHARLNDLKLQG 540
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVY 654
+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVH LV+
Sbjct: 541 IDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHYLVF 600
Query: 655 KEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+E E V+ +L AL+GEE+KNVEIKLRTFG++ +K+A+++VVNACSS+DYT+NIVG
Sbjct: 601 EESAESVEKMLDRALRGEEEKNVEIKLRTFGSQKQKEAIYLVVNACSSRDYTDNIVG 657
>gi|406685651|gb|AFS51266.1| phytochrome P, partial [Pinus elliottii]
Length = 656
Score = 995 bits (2573), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/656 (73%), Positives = 553/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEK--QEILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ Q++LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQQDVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VIDLEP R
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLPGGD+ LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPGGDVGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGNDEE G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
A GLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPMG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
VTQSPSI DLVKCDGAALYY G + GVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 TVTQSPSIRDLVKCDGAALYYGGMCWMXGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DF FWFRSHTAKE+KWGGAKHHP+DKDD +RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFPFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +LH+AL+GEE+KNVE+ L+TFG + K+AV +VVNACSS+D+T+NIVG
Sbjct: 601 ESVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVG 656
>gi|406685613|gb|AFS51247.1| phytochrome P, partial [Prumnopitys ferruginoides]
Length = 662
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/662 (73%), Positives = 554/662 (83%), Gaps = 34/662 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------I 138
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQ+VPN+E + +
Sbjct: 1 AYLSRLQRGGTIQPFGCMLAVEEMGFKIIAYSQNALEMLDLMPQAVPNMELGKPGGGGAV 60
Query: 139 LTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDL 198
LTIGTDVRTLFT +S+ L KA AREI+L+NPIW+HS+ TGKPFYAI+HR+DVGIVIDL
Sbjct: 61 LTIGTDVRTLFTPASARALAKAAMAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 199 EPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVY 258
EP R D ++S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY
Sbjct: 121 EPVRMGDASMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 259 RFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQ 318
+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A P+ V+Q
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSANPVKVVQ 240
Query: 319 DEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA--VGGRSTTRLW 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGNDEE GR + +LW
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGWTSGRVSMKLW 300
Query: 377 --------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLR
Sbjct: 301 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 360
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
D+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL YHGDSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGXTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDL 590
RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K +V+A+L D+
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDM 540
Query: 591 ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVH 650
+LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVH
Sbjct: 541 KLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVH 600
Query: 651 DLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
DLV++E E V+ +L+ AL+GEE+KNVE+KLRTFG + +K+A+++V NACSS+DYT+NIV
Sbjct: 601 DLVFEESAESVEKMLYRALRGEEEKNVEVKLRTFGPKKQKEAIYLVANACSSRDYTDNIV 660
Query: 711 GV 712
GV
Sbjct: 661 GV 662
>gi|327241206|gb|AEA40447.1| phytochrome A [Amblyopyrum muticum]
Length = 1130
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/1110 (47%), Positives = 714/1110 (64%), Gaps = 53/1110 (4%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR------TMSHSVPEQQISAYLSKI 90
T + +AQ T+DA L+ FE ES SFDYS+ V T+ + AYL I
Sbjct: 18 TQERVLAQTTLDAELNTEFE---ESNDSFDYSKLVEAQRDTPTVLQEGRSENAIAYLQHI 74
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRG +Q FGC +A+DE +F V+A+SENA EML +VP + L +GT+V +LFT
Sbjct: 75 QRGKRLQSFGCLLALDEKSFNVVAFSENAPEMLTAVSHAVPGVVDPPRLDMGTNVWSLFT 134
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALS 209
+ L KA G +++LLNPI + K +GKPFYAI+HR V+D EP TE PA
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCFVVDFEPVNPTEFPATG 194
Query: 210 IAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVV 269
AGA+Q KLA +AIS++Q+LPGG ++LLC+T+V+ V +L GYDRVM Y+FHED HGEVV
Sbjct: 195 -AGALQPYKLAAKAISKIQALPGGSMELLCNTMVKEVFKLIGYDRVMAYKFHEDNHGEVV 253
Query: 270 AESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLV 329
AE +P LEPY GLHYPATDIPQA+R +F + +VRMI D H + VI+DE L + L
Sbjct: 254 AEITKPGLEPYLGLHYPATDIPQAARCVFMKTKVRMICDVHTRSIKVIEDEALPFDISLC 313
Query: 330 GSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE-AVGGRSTTR------LWA----- 377
GS LRA H CH QYM NM SIASL +AV++N N+E+ VG + LW
Sbjct: 314 GSALRAAHNCHLQYMENMSSIASLTMAVVVNENEEDDEVGSEQPAQQQQKKILWGLVVCH 373
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAG 415
F + +N E ++ QL EK +LR QT+L ML ++ SP
Sbjct: 374 HESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLHEKSILRMQTILSGMLFKEASPLT 433
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IV+ +P+IMDL+KCDGAAL Y K + LG PTE+QI+D+ WL H DS GLST+SL
Sbjct: 434 IVSGAPNIMDLIKCDGAALLYGDKLWHLGNAPTESQIRDLALWLSEVHMDSIGLSTESLH 493
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGY A+ LGD VCGMAVA I+ LFWFRSH A+EI+WGGAK+ P D+DD +RMHPR
Sbjct: 494 DAGYLGASALGDMVCGMAVAKISSNHILFWFRSHIAEEIRWGGAKNDPSDQDDSRRMHPR 553
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SFKAFLEVVK +SL W ++EMDAIHSLQLILR + KA ++ Q+ DL+L G+
Sbjct: 554 LSFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+V +L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV
Sbjct: 673 SSVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFV 732
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QD+T KLVMDKF ++GDYKAI+H+PNPLIPPIF +DE C EWN AM KLTGW +
Sbjct: 733 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHKE 792
Query: 776 DIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
+++ KML+GEVF S C LK DA +++A G++TEK PF F+R+GKY +
Sbjct: 793 EVLDKMLLGEVFDSRNASCLLKNKDAFVSLCAVINSALAGKETEKAPFGFFNRSGKYTEC 852
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPL 892
LL+ N+R N +G I G FCF+ I S ELQQAL VQ+ E+ RLK +Y+ I NPL
Sbjct: 853 LLSVNRRQNEDGLITGVFCFIHIPSHELQQALQVQQASEQASLKRLKAFSYMRHAINNPL 912
Query: 893 SGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFL 950
SG+ ++ L+ TDL E+Q + + S C Q+ KI+ D+D +SI + S L+ E AEF
Sbjct: 913 SGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDSIMEKSSCLDLEMAEFA 972
Query: 951 LGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPS 1010
L V+ A VSQV++ + +++ ++PE +YGD R+QQ+L+DFL V++SP
Sbjct: 973 LQDVVVAAVSQVLIACEGKGIRVSCNLPERFMKKLIYGDGVRLQQILSDFLSISVKFSPV 1032
Query: 1011 AEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLS 1069
G +EI + T E ++ + R+ G G+P EL+ MF ++EGLGL
Sbjct: 1033 G-GSIEISAKATKNSIGENLHLIDLDLRIKHHGLGVPAELMAQMFEEDDTQQSEEGLGLL 1091
Query: 1070 MCRKILKLMNGEVQYIRESERCYFLIIFEL 1099
+ R +L+LMNG+V+++RE+ F++ EL
Sbjct: 1092 VSRNLLRLMNGDVRHLREAGMSIFILTAEL 1121
>gi|406685521|gb|AFS51201.1| phytochrome P, partial [Lepidothamnus fonkii]
Length = 661
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/661 (73%), Positives = 552/661 (83%), Gaps = 34/661 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------I 138
AYLS++QRGG IQPFGC +AV++ F++IAYSENA EML + PQSVPN++ + +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEDTNFKIIAYSENALEMLDIMPQSVPNMDLGKSGGGGAV 60
Query: 139 LTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDL 198
LTIG DVRTLFT +S+ LEKA A+EI+L+NPIW+HS+ TGKPFYAI+H +DVGIVIDL
Sbjct: 61 LTIGADVRTLFTPASARALEKASMAQEISLMNPIWMHSQYTGKPFYAIVHGIDVGIVIDL 120
Query: 199 EPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVY 258
EPA+T D A+S AGAVQSQKL+VRA S+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY
Sbjct: 121 EPAKTGDAAMSAAGAVQSQKLSVRASSRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 259 RFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQ 318
+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 319 DEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW 376
+ LMQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 SQELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLW 300
Query: 377 --------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 410
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLR
Sbjct: 301 GLVVCHHTSPRAVPFPLRYGCEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 360
Query: 411 DSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLS 470
D+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL YHGDSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 471 TDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 530
TDSLADAGYP AA+LGDAVCGMA A IT DFLFWFRSHTAKE+KWGGAKHHP+DKDD +
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPDDKDDVR 480
Query: 531 RMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDL 590
RMHPRSSFKAFLEVVK RSLP +N EMDAIHSLQLILR SF+D E SN+K +V+A+L DL
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPRENVEMDAIHSLQLILRGSFQDIEDSNTKTMVHARLNDL 540
Query: 591 ELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVH 650
+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKVAELTGL V EAMGKSLVH
Sbjct: 541 KLQGIDELSSVATEMVRLIETATAPILAVDSEGLVNGWNAKVAELTGLPVGEAMGKSLVH 600
Query: 651 DLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
DLV +E E V+ +L+ A++GEE+KN+EIKLRTFG + +K+ +++VVNACSS+DYT+NIV
Sbjct: 601 DLVCEESAECVEKMLNRAVRGEEEKNIEIKLRTFGPQKQKEVIYLVVNACSSRDYTDNIV 660
Query: 711 G 711
G
Sbjct: 661 G 661
>gi|218683945|gb|ACL00926.1| phytochrome D [Sisymbrium altissimum]
Length = 632
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/634 (76%), Positives = 535/634 (84%), Gaps = 35/634 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVVESVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEV+AESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDCHA+P+ V+QD+ L Q
Sbjct: 61 GEVIAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT-RLW-------- 376
+CLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGN+ + GG + +LW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNENDGNGGGRNSMKLWGLVVCHHT 180
Query: 377 ------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
AFGLQLNMELQLA Q+SEK VLR QTL CDMLLRDSPAGIVT
Sbjct: 181 SARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLSCDMLLRDSPAGIVT 240
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSPSIMDLVKC+GAA YQGKYY LGV PTE QI DIVEWLL H DSTGLSTDSL DAG
Sbjct: 241 QSPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQISDIVEWLLANHSDSTGLSTDSLGDAG 300
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP+AA LGDAVCGMAVAYITK DFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPRSSF
Sbjct: 301 YPRAAALGDAVCGMAVAYITKGDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSF 360
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLV------DLEL 592
KAFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++E +SK VNA ++
Sbjct: 361 KAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEVMDSK--VNAAGAVQPLGENMTE 418
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QG++E+ +VAREMVRLIETAT PIFAVD+ GC+NGWNAK+AELTGLSVEE+MGKSLV DL
Sbjct: 419 QGMEEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEESMGKSLVRDL 478
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
+YKE EE VD LL AL+G+E KNVE+KL+TF + + KAVF+VVNACSSKDY NNIVGV
Sbjct: 479 IYKENEETVDRLLSGALRGDEGKNVEVKLKTFDPQLQGKAVFIVVNACSSKDYLNNIVGV 538
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
CF+GQDVT QK+VMDKFI+I+GDYKAI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTGW
Sbjct: 539 CFMGQDVTSQKIVMDKFINIKGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGW 598
Query: 773 SRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIAL 806
R ++IGK+LV EVFGSCCRLK PD LTKFMI L
Sbjct: 599 PRSEVIGKLLVKEVFGSCCRLKDPDTLTKFMIVL 632
>gi|406685633|gb|AFS51257.1| phytochrome P, partial [Cedrus libani]
Length = 656
Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/656 (73%), Positives = 553/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEK--QEILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML L QSVP++E+ E+LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLVSQSVPSMEQPQSEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLF ++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP +
Sbjct: 61 TDVRTLFIAASAHSLEKAAMAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A P+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCIAPPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGND+E G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTETQIKDI +WLL +H DSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTETQIKDIADWLLEHHCDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S++K +V+A+L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSSTKTMVHARLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DLV +
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVLE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E VD +L +A++GEE+KNVE+ LRTFG + +K+AVF+VVNACSS+D+T+NIVG
Sbjct: 601 ESVERVDKMLDNAIRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685531|gb|AFS51206.1| phytochrome P, partial [Nageia formosensis]
Length = 660
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/660 (73%), Positives = 549/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
T+GTDVRTLFT SS+ LEKA A +I+L+NPI ++S+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TLGTDVRTLFTPSSARALEKAAMAPDISLMNPICVYSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY G HYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGSHYPATDIPQASRFLFMQNRVRMICDCSATPVTVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDIVEWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIVEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RS PW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSSPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
QG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 YQGIDELSSVATEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V ++ E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEDSAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685497|gb|AFS51189.1| phytochrome P, partial [Afrocarpus usambarensis]
Length = 660
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/660 (73%), Positives = 547/660 (82%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC + V+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLF S+ LEKA A +I+L+NPI +HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + L VTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685639|gb|AFS51260.1| phytochrome P, partial [Larix kaempferi]
Length = 655
Score = 992 bits (2565), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/656 (73%), Positives = 556/656 (84%), Gaps = 30/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP +
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQS P GDI LLCDTVVE+VR+LTGY+RVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSPPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFTQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGND+E G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LR QTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRIQTLLCDMLLRDAPMG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLV DLV++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+KNVE+ LRTFG + +++AVF+VVNACSS+D+T+NIVG
Sbjct: 601 ESVERVEKMLYNALRGEEEKNVEMMLRTFGPQ-KQEAVFLVVNACSSRDFTDNIVG 655
>gi|406685493|gb|AFS51187.1| phytochrome P, partial [Afrocarpus gracilior]
Length = 660
Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/660 (73%), Positives = 546/660 (82%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC + V+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVR LF S+ LEKA A +I+L+NPI +HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRILFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + L VTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|410718272|gb|AFV79512.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/844 (57%), Positives = 613/844 (72%), Gaps = 35/844 (4%)
Query: 289 DIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMG 348
DIPQASRFLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 349 SIASLALAVIIN----GNDEEAVGGRSTTRLWA--------------------------F 378
SIASL +AV+IN D E + RLW F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
G+QLN E++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
++ LGVTPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
+DFLFWFRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
AIHSLQLILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI A
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILA 360
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD +G VNGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++
Sbjct: 361 VDAYGVVNGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQXXX 419
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+A
Sbjct: 420 XXXXXXXXXXXXXXXVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV +P+PLIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
+ALT+ I L+++ GQ TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL I
Sbjct: 540 QNALTQLRIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
ASPELQQAL VQ E+ RLK L Y+ EIKNPL G+ FT ++E TDL EDQ+QL+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
ETSA C+KQ+LKI+ D+DLESIEDG L+ + EF LG++++AV+SQ M+ E+ L++
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
D+P EI T +YGDQ+R+QQ+LA+FL+ +++++P AE WV I V PT + G ++
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTP-AEKWVRIKVSPTKRHLGGGVYVIRI 778
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
EFR+ PG GLP +LVQ MF+ M+QEG GL +CRK+++LMNG+VQY+R F+I
Sbjct: 779 EFRITHPGPGLPEKLVQQMFNFDPDMSQEGFGLLICRKLVRLMNGDVQYLRGGGTSSFVI 838
Query: 1096 IFEL 1099
+ EL
Sbjct: 839 VVEL 842
>gi|406685475|gb|AFS51178.1| phytochrome P, partial [Araucaria montana]
Length = 677
Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/677 (71%), Positives = 552/677 (81%), Gaps = 50/677 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT+SS+ LEKA A EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+V+DLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT--------RLW--------------------------AFGLQLNMELQLASQLSE 394
G + +LW AFGLQLNMELQLA+QL+E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KH+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I +WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+ SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGL V EAMGKSLVHDL+++E VD +L+HAL+GEE+KNVEIKLRTFG + +KKA++
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 695 VVVNACSSKDYTNNIVG 711
+VVNACSS+DYT+NIVG
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685535|gb|AFS51208.1| phytochrome P, partial [Nageia wallichiana]
Length = 660
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/660 (73%), Positives = 548/660 (83%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+EA F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEEANFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
T+GTDVRTLFT SS+ LEKA A +I+L+NPI +HS+ + KPF AI+HR+DVG+VIDLE
Sbjct: 61 TLGTDVRTLFTPSSARALEKAAMAPDISLMNPICVHSQYSRKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVTVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTL APHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSI DLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSITDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRS+TAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSNTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
QG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 YQGIDELSSVATEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V ++ E V+ +L+ AL+GEE+KNVEI+LRTFG + +K+A+++VVNACSS+DYT NIVG
Sbjct: 601 VVLEDSAECVEKMLYRALRGEEEKNVEIRLRTFGTQKQKEAIYLVVNACSSRDYTENIVG 660
>gi|406685457|gb|AFS51169.1| phytochrome P, partial [Araucaria bernieri]
Length = 675
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/675 (71%), Positives = 551/675 (81%), Gaps = 48/675 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT+SS+ LEKA A EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+V+DLEP RT D ALS AGAVQSQKLAVRAIS LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISGLQSLPAGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT------RLW--------------------------AFGLQLNMELQLASQLSEKH 396
G + +LW AFGLQLNMELQLA+QL+EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
+WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKW 480
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D +
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 577 SNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELT 636
SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 637 GLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
GL V EAMGKSLVHDL+++E +D +L+HAL+GEE+KNVEIKLRTFG + +KKA+++V
Sbjct: 601 GLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIYLV 660
Query: 697 VNACSSKDYTNNIVG 711
VNACSS+DYT+NIVG
Sbjct: 661 VNACSSRDYTDNIVG 675
>gi|406685477|gb|AFS51179.1| phytochrome P, partial [Araucaria muelleri]
Length = 677
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/677 (71%), Positives = 551/677 (81%), Gaps = 50/677 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT+SS+ LEKA A EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+V+DLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT--------RLW--------------------------AFGLQLNMELQLASQLSE 394
G + +LW AFGLQLNMELQLA+QL+E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KH+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGA LYY G + LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGATLYYGGMCWMLGVTPTEAQIKD 420
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I +WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+ SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGL V EAMGKSLVHDL+++E VD +L+HAL+GEE+KNVEIKLRTFG + +KKA++
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 695 VVVNACSSKDYTNNIVG 711
+VVNACSS+DYT+NIVG
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685495|gb|AFS51188.1| phytochrome P, partial [Afrocarpus mannii]
Length = 660
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/660 (73%), Positives = 546/660 (82%), Gaps = 33/660 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC + V+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLF S+ LEKA A +I+L+NPI +HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + L VTPTE QI+DI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIRDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVNACS +DYT NIVG
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSXRDYTENIVG 660
>gi|406685481|gb|AFS51181.1| phytochrome P, partial [Araucaria schmidii]
Length = 677
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/677 (71%), Positives = 551/677 (81%), Gaps = 50/677 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT+SS+ LEKA A EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+V+DLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT--------RLW--------------------------AFGLQLNMELQLASQLSE 394
G + +LW AFGLQLNMELQLA+QL+E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KH+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I +WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+ SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGL V EAMGKSLVHDL+++E +D +L+HAL+GEE+KNVEI LRTFG + +KKA++
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEINLRTFGPQKQKKAIY 660
Query: 695 VVVNACSSKDYTNNIVG 711
+VVNACSS+DYT+NIVG
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685629|gb|AFS51255.1| phytochrome P, partial [Abies homolepis]
Length = 656
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/656 (73%), Positives = 552/656 (84%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEK--QEILTIG 142
AYLS+IQRGG +QPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ QE+LTIG
Sbjct: 1 AYLSRIQRGGRVQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP R
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 IGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R +LEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYM NMGSIASL +AVIINGND+EA G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAAL+Y G + LGVTPT+ QIK I +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTKAQIKGIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPR
Sbjct: 421 DAGYPSAASLGDAVCGMAPARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKGDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SS KAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSLKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DL+++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLLFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+ NVE+ LRTFG + +K+AVF+VVNACSS+D+T NIVG
Sbjct: 601 ESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685471|gb|AFS51176.1| phytochrome P, partial [Araucaria laubenfelsii]
Length = 677
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/677 (71%), Positives = 551/677 (81%), Gaps = 50/677 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT+SS+ LEKA A EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+V+DLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT--------RLW--------------------------AFGLQLNMELQLASQLSE 394
G + +LW AFGLQLNMELQLA+QL+E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KH+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I +WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+ SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGL V EAMGKSLVHDL+++E VD +L+ AL+GEE+KNVEIKLRTFG + +KKA++
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYQALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 695 VVVNACSSKDYTNNIVG 711
+VVNACSS+DYT+NIVG
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685455|gb|AFS51168.1| phytochrome P, partial [Araucaria araucana]
Length = 675
Score = 986 bits (2550), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/675 (71%), Positives = 552/675 (81%), Gaps = 48/675 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYL+++QRGG IQPFGCT+AV+E +F ++AYSENA E+L L+PQSVPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCTLAVEETSFLIVAYSENAVELLDLSPQSVPNMDMDRDEAMGSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT SS+ LEKA A+EI+++NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVITIGTDVRTLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+VIDLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ V+Q L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVVQAGQLQQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT------RLW--------------------------AFGLQLNMELQLASQLSEKH 396
G + +LW AFGLQLNMELQLA+QL+EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
+WLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D +
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 577 SNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELT 636
SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 637 GLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
GL V EAMGKSLVHDL++ E VD +L HAL+GEE+KNVEIKLRTFG + +KKA+++V
Sbjct: 601 GLPVGEAMGKSLVHDLIFDESANTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLV 660
Query: 697 VNACSSKDYTNNIVG 711
VNACSS+DYT+NIVG
Sbjct: 661 VNACSSRDYTDNIVG 675
>gi|406685519|gb|AFS51200.1| phytochrome P, partial [Lagarostrobos franklinii]
Length = 643
Score = 986 bits (2550), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/643 (73%), Positives = 542/643 (84%), Gaps = 29/643 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-KQEILTIGT 143
AYLS++QRGG IQPF C +AV+E F++IAYS+NA EML + PQSVPN++ + +LTIGT
Sbjct: 1 AYLSRMQRGGTIQPFSCMLAVEETNFKIIAYSQNALEMLDIMPQSVPNMDLGKSVLTIGT 60
Query: 144 DVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPART 203
DVRTLFT +S+ LEKA A+EI+L+NPIW+HS+ TGKPFYAI+HR+DVG+VIDLEP RT
Sbjct: 61 DVRTLFTPASARALEKAAMAQEISLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDLEPVRT 120
Query: 204 EDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHED 263
D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCD+VVE VR+LTGYDRVMVY+FHED
Sbjct: 121 GDAAMSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDSVVEDVRELTGYDRVMVYKFHED 180
Query: 264 EHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLM 323
EHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 EHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQSEELR 240
Query: 324 QPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW----- 376
QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 QPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGAGTSGRSSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTP E QIKDI +WLL YHGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPAEAQIKDIADWLLEYHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K +V+A+L DL+LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSLVHDL+ +
Sbjct: 541 DELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHDLILE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+ +++VVN
Sbjct: 601 ESAESVEKMLYKALRGEEEKNVEIKLRTFGPQKQKEVIYLVVN 643
>gi|406685469|gb|AFS51175.1| phytochrome P, partial [Araucaria hunsteinii]
Length = 675
Score = 986 bits (2549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/675 (71%), Positives = 551/675 (81%), Gaps = 48/675 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYL+++QRGG IQPFGC +AV+E +F+++AYSENA EML L+PQSVPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCMLAVEETSFQIVAYSENAVEMLDLSPQSVPNMDMDRDEAMGSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVR LFT SS+ LEKA A+EI+++NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVITIGTDVRNLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+VIDLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ V+Q L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVVQAGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT------RLW--------------------------AFGLQLNMELQLASQLSEKH 396
G + +LW AFGLQLNMELQLA+QL+EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
+WLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D +
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 577 SNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELT 636
SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 637 GLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
GL V EAMGKSL HDL++ E VD +L+HAL+GEE+KNVEIKLRTFG + +KKA+++V
Sbjct: 601 GLPVGEAMGKSLAHDLIFDESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIYLV 660
Query: 697 VNACSSKDYTNNIVG 711
VNACSS+DYT+NIVG
Sbjct: 661 VNACSSRDYTDNIVG 675
>gi|406685463|gb|AFS51172.1| phytochrome P, partial [Araucaria columnaris]
Length = 677
Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/677 (71%), Positives = 551/677 (81%), Gaps = 50/677 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT+SS+ LE+A A EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALERAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+V+DLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT--------RLW--------------------------AFGLQLNMELQLASQLSE 394
G + +LW AFGLQLNMELQLA+QL+E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KH+LRTQTLLCDMLLRD+P GIVT SPSIMD VKCDGAALYY G + LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDPVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I +WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+ SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGL V EAMGKSLVHDL+++E VD +L+HAL+GEE+KNVEIKLRTFG + +KKA++
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 695 VVVNACSSKDYTNNIVG 711
+VVNACSS+DYT+NIVG
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685627|gb|AFS51254.1| phytochrome P, partial [Abies firma]
Length = 656
Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/656 (72%), Positives = 550/656 (83%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEK--QEILTIG 142
AYLS+IQRGG +QPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ QE+LTIG
Sbjct: 1 AYLSRIQRGGRVQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP R
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 IGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHG +R +LEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGGSCRGIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYM NMGSIASL +AVIINGND+EA G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAAL+Y G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPSAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV DL+++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLLFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+ NVE+ LRTFG + +K+AVF+VVNACSS+D+T NIVG
Sbjct: 601 ESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685467|gb|AFS51174.1| phytochrome P, partial [Araucaria humboldtensis]
Length = 677
Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/677 (71%), Positives = 549/677 (81%), Gaps = 50/677 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT+SS+ LEKA A EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+V+DLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT--------RLW--------------------------AFGLQLNMELQLASQLSE 394
G + +LW AFGLQLNMELQLA+QL+E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KH+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I +WLL YH DSTGL TDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLGTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+ SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGL V EAMGKSLVHDL+++E VD +L+HAL+GEE+KNVEIKLRTFG + +KKA++
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 695 VVVNACSSKDYTNNIVG 711
+VVNAC S+DYT NIVG
Sbjct: 661 LVVNACFSRDYTENIVG 677
>gi|406685631|gb|AFS51256.1| phytochrome P, partial [Abies lasiocarpa]
Length = 656
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/656 (73%), Positives = 551/656 (83%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEK--QEILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSV ++E+ QE+LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVLSMEQPQQEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP R
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R +LEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYM NMGSIASL +AVIINGND+EA G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAAL+Y G + LGVTPTE QIKDI +WLL +HGDS GLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSAGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT ++FLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKA LEVVK RS PWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKALLEVVKRRSSPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMG SLV D +++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDPLFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+ NVE+ LRTFG + +K+AVF+VVNACSS+D+T NIVG
Sbjct: 601 ESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685625|gb|AFS51253.1| phytochrome P, partial [Abies concolor]
Length = 656
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/656 (73%), Positives = 550/656 (83%), Gaps = 29/656 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEK--QEILTIG 142
AYLS+IQRGG +QPFGC AV+E TFR+IAYSENA EML LAPQSVP++E+ QE+LTIG
Sbjct: 1 AYLSRIQRGGRVQPFGCVPAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP R
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 IGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R +LEPY GLHYPATDIPQASRF F QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFSFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYM NMGSIASL +AVIINGND+EA G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAAL+Y G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPSAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
DELSSVA EMVRLIETATAPI AVD +G VNG KVAELTGL V EAMG SLV DL+++
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGMECKVAELTGLPVGEAMGMSLVQDLLFE 600
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E E V+ +L++AL+GEE+ NVE+ LRTFG + +K+AVF+VVNACSS+D+T NIVG
Sbjct: 601 ESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|326489438|dbj|BAK01700.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1089
Score = 983 bits (2542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/1041 (49%), Positives = 690/1041 (66%), Gaps = 44/1041 (4%)
Query: 100 GCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEK 159
GC +A+DE +F VIA+SENA EML +VP+++ L IGT+VR+LFT + L K
Sbjct: 43 GCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTEQGATALHK 102
Query: 160 AFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQSQK 218
A G +++LLNP + K +GKPFYAI+HR +V+D EP TE PA + AGA+QS K
Sbjct: 103 ALGFADVSLLNPFLVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPA-TAAGALQSYK 161
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
LA +AIS++Q+LPGG ++LLC+TVV+ V +LTGYDRVM Y+FHED HGEV AE +P LE
Sbjct: 162 LAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPGLE 221
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLF +N+VRMI D A L VI+DE L + L GS+LRA H
Sbjct: 222 PYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCGSSLRAAHS 281
Query: 339 CHAQYMANMGSIASLALAVIINGNDE-------EAVGGRSTTRLWA-------------- 377
CH QYM NM SIASL +AV++N ++E + + LW
Sbjct: 282 CHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHHESPRYVPF 341
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSPSIM 424
F + +N E ++ QL EK +LR QT+L DML ++ SP IV+ +P+IM
Sbjct: 342 PLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGTPNIM 401
Query: 425 DLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAAT 484
DL+KCDGAAL Y K + LG PTE+QI+ I WL H DSTGLST+SL DAGYP A+
Sbjct: 402 DLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHDAGYPGASA 461
Query: 485 LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 544
LGD VCG+AVA I D LFWFRSHTA+EI+WGGAK+ P D+DD +RMHPR SFKAFLEV
Sbjct: 462 LGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRLSFKAFLEV 521
Query: 545 VKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVARE 604
VK +SL W + EMDAIHSLQLILR + D KA ++ Q+ DL+L G+ EL +V E
Sbjct: 522 VKMKSLAWSDYEMDAIHSLQLILRGALDDVAKPTGKASLDEQIGDLKLDGIAELQAVTSE 581
Query: 605 MVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNL 664
MVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV + +V +
Sbjct: 582 MVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSVPVVQRM 640
Query: 665 LHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKL 724
L+ AL+G+E+K V ++T G + V +VVNAC+S+D +++VGVCFV QD+T KL
Sbjct: 641 LYLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTVHKL 700
Query: 725 VMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVG 784
VMDKF ++GDY AIVH+PNPLIPPIF +DE CSEWN AM KLTGW R +++ KML+G
Sbjct: 701 VMDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHREEVLDKMLLG 760
Query: 785 EVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVN 841
EVF S C LK DA + +++A G++TEK PF FDR+GKY + LL+ N R N
Sbjct: 761 EVFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTECLLSVNSRAN 820
Query: 842 MEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSL 901
+G I G FCF+ I S ELQQAL VQ+ E+ RLK +Y+ I NPLSG+ ++
Sbjct: 821 EDGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPLSGMLYSRKA 880
Query: 902 LEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGS--LEFEKAEFLLGSVINAVV 959
L+ TDL E+Q + + S C Q+ KI+ D+D ++I + S L+ E AEF+L V+ A V
Sbjct: 881 LKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLDLEMAEFVLQDVVVAAV 940
Query: 960 SQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHV 1019
SQV++ + + +++ ++PE VYGD R+QQ+L+DFL V++SP G VEI
Sbjct: 941 SQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFLSISVKFSPVG-GSVEISA 999
Query: 1020 RPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMF-HSSRWMTQEGLGLSMCRKILKLM 1078
+ T E ++ E R+ G G+P EL+ MF + ++EGLGL + R +L+LM
Sbjct: 1000 QATKNSIGENLHLIDLELRIKHRGLGVPAELMAQMFEEENTEQSEEGLGLLVSRNLLRLM 1059
Query: 1079 NGEVQYIRESERCYFLIIFEL 1099
NG+V+++RE+ F++ EL
Sbjct: 1060 NGDVRHLREAGMSIFILTAEL 1080
>gi|400480|emb|CAA52883.1| phytochrome [Psilotum nudum]
Length = 794
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/789 (59%), Positives = 597/789 (75%), Gaps = 32/789 (4%)
Query: 348 GSIASLALAVIINGNDEEAVGGRS---TTRLWA--------------------------F 378
GSI SL +AVI+N ND E G + RLW F
Sbjct: 1 GSIGSLVMAVIVNDNDAEPSGRGNQPKNRRLWGMVVCHHTTPRAVPFSLRSACEFLMQVF 60
Query: 379 GLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQG 438
GLQLNME++LA+Q+ EKH+LRTQTLLCDMLLRD+P GIVTQSP+IMDLVKCDGAALYY
Sbjct: 61 GLQLNMEIELAAQMREKHILRTQTLLCDMLLRDAPIGIVTQSPNIMDLVKCDGAALYYGK 120
Query: 439 KYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYIT 498
K++ LG TPTE QIKD+ +WLL H DSTGLST+SLADAG+P AA LGDAVCGMA IT
Sbjct: 121 KFWLLGTTPTEAQIKDLADWLLDVHRDSTGLSTESLADAGFPGAAALGDAVCGMAAVKIT 180
Query: 499 KRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMD 558
RD+LFWFRSHTAKEIKWGGAKH+P+DKDDG++MHPRSSFKAFLEVVK RS PW++ EMD
Sbjct: 181 PRDYLFWFRSHTAKEIKWGGAKHNPDDKDDGKKMHPRSSFKAFLEVVKWRSSPWEDVEMD 240
Query: 559 AIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFA 618
A+HSLQLILR SF+D + S SK +++ +L DL L G+DELS+VA EMVRL+ETATAPI A
Sbjct: 241 AVHSLQLILRGSFQDIDDSESKTMIHHRLNDLNLHGMDELSTVANEMVRLMETATAPILA 300
Query: 619 VDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVE 678
VD G +NGWN K AELTGL +E+AM KSLV DLV E V+ LL+ AL+GEE++NVE
Sbjct: 301 VDSSGFINGWNGKAAELTGLPLEDAMNKSLVRDLVVDESVSTVERLLYLALQGEEERNVE 360
Query: 679 IKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKA 738
IKL+TFG + K V +VVNAC+S++ T N+VGVCFVGQDVT +K+VMDKF IQGDY+
Sbjct: 361 IKLKTFGTQADKGPVILVVNACASRNITANVVGVCFVGQDVTGEKVVMDKFTRIQGDYRT 420
Query: 739 IVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKG 795
IV SPNPLIPPIF SDE CSEWN AM KL+GW +++GKM VGE+FGS CCRL+G
Sbjct: 421 IVQSPNPLIPPIFGSDEFGYCSEWNPAMVKLSGWKMEEVLGKMNVGEIFGSEMACCRLRG 480
Query: 796 PDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQI 855
DA+TKFMI L++A GGQD+++FP FDR GKYV+ALL ANKR + G I G FCFL I
Sbjct: 481 QDAMTKFMIVLNSAMGGQDSDRFPLGFFDRQGKYVEALLIANKRTDGAGAITGVFCFLHI 540
Query: 856 ASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLL 915
AS E+QQAL VQ++ + +LKE+AY+ QEI+NPL G+ FT LLE T+L+E+QKQ++
Sbjct: 541 ASAEVQQALQVQKRSARTALDKLKEVAYMRQEIRNPLYGIMFTRRLLEGTNLSEEQKQII 600
Query: 916 ETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIR 975
+TSA CEKQ+ +I+ + + E+++ G+++ + EF +G+V++AV+SQ M+ RE+ LQLIR
Sbjct: 601 DTSAVCEKQLHQILDEDNFENLDHGNIDLDTIEFTMGTVMDAVISQGMIRSREKGLQLIR 660
Query: 976 DIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHN 1035
+ P +IK + +YGDQ R+QQVLADFL VR++ S++GWV I V PT+K G ++
Sbjct: 661 ETPVDIKNMRLYGDQLRLQQVLADFLTTAVRFTSSSDGWVGIKVVPTMKGLGGGLHVMRF 720
Query: 1036 EFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLI 1095
++R+ PG+G+P +LVQ MF SR +TQEG+GLS+ RK+++LMNG+V YIRE+ CYFL+
Sbjct: 721 DYRISHPGKGIPEDLVQQMFDCSREITQEGMGLSVSRKLVRLMNGDVSYIREAGVCYFLV 780
Query: 1096 IFELPMPRR 1104
E P+ R
Sbjct: 781 NVEFPLADR 789
>gi|406685557|gb|AFS51219.1| phytochrome P, partial [Podocarpus coriaceus]
Length = 647
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/647 (73%), Positives = 539/647 (83%), Gaps = 33/647 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEAL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+V+DLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVN
Sbjct: 601 VVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 647
>gi|371940266|dbj|BAL45570.1| truncate phytochrome A2 protein [Glycine max]
Length = 894
Score = 980 bits (2533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/870 (55%), Positives = 627/870 (72%), Gaps = 40/870 (4%)
Query: 41 AIAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQ 97
A+A TVDA+LHA FE+SG S S + ++ ++ +AYL +Q+G IQ
Sbjct: 22 AMALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S+ L
Sbjct: 82 PFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
+KA G E+ LLNP+ IH K +GKPFYAI+HRV ++ID EP + + ++ AGA+QS
Sbjct: 142 QKALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P L
Sbjct: 202 KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA---------------- 377
CHAQYMANM SIASL +AV++N N+E +A+ + RLW
Sbjct: 322 SCHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPL 381
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F + +N E++L Q+ EK++LRTQTLLCD+++RD+P GIV++SP+IMDLV
Sbjct: 382 RYACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLV 441
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAAL Y+ K + LGVTP+E+QI++I WL YH DSTG STDSL+DAG+P A +LGD
Sbjct: 442 KCDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGD 501
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDDG+RMHPRSSFK FL+VVK+
Sbjct: 502 VVCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKA 561
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDLELQGVDELSSVAREM 605
RSLPW E+DA+HSLQLILR++F+D E+ N+KA +N +L DL+++G+ EL +V E+
Sbjct: 562 RSLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKA-INTRLSDLKIEGMQELEAVTSEI 620
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETAT PI AVDV G VNGWN K+AELTGL V EAMGK L+ LV + V +L
Sbjct: 621 VRLIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKML 679
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
+ AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV D+T QK V
Sbjct: 680 NLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNV 739
Query: 726 MDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGE 785
MDKF I+GDYKAIV + NPLIPPIF +DE C EWN AM KLTGW R +++ KML+GE
Sbjct: 740 MDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGE 799
Query: 786 VFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNM 842
+FG+ CRLK +A + L+ A G +TEK PF F RNGKYV+ LL+ +K++++
Sbjct: 800 LFGTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDV 859
Query: 843 EGQIVGAFCFLQIASPELQQALTVQRQQEK 872
EG + G FCFLQ+ASPELQQAL +QR E+
Sbjct: 860 EGLVTGVFCFLQLASPELQQALHIQRLSEQ 889
>gi|406685453|gb|AFS51167.1| phytochrome P, partial [Araucaria angustifolia]
Length = 675
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/675 (71%), Positives = 553/675 (81%), Gaps = 48/675 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYL+++QRGG IQPFGCT+AV+E +F ++AYSENA EML L+P+SVPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCTLAVEETSFLIVAYSENAVEMLDLSPRSVPNMDMDRDEAMGSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT SS+ LEKA A+EI+++NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVITIGTDVRTLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+VIDLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ V+Q L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN+EE G
Sbjct: 241 CRAAPVKVVQAGQLKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEEEGGG 300
Query: 369 GRSTT------RLW--------------------------AFGLQLNMELQLASQLSEKH 396
G + +LW AFGLQLNMELQLA+QL+EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSSRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
+WLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D +
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 577 SNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELT 636
SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 637 GLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
GL V EAMGKSLVHDL++ E VD +L+HAL+GEE+KNVEIKLRTFG + +KKA+++V
Sbjct: 601 GLPVGEAMGKSLVHDLIFDESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIYLV 660
Query: 697 VNACSSKDYTNNIVG 711
VNACSS+DYT+NIVG
Sbjct: 661 VNACSSRDYTDNIVG 675
>gi|406685473|gb|AFS51177.1| phytochrome P, partial [Araucaria luxurians]
Length = 679
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/679 (70%), Positives = 546/679 (80%), Gaps = 52/679 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT+SS+ LE+A A EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALERAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTEDPALSIAGA-------VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESV 246
+V+DLEP RT A VQSQKLAVRAIS+LQSLP GDI LLCDTVVE V
Sbjct: 121 MVMDLEPVRTGSGGGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDV 180
Query: 247 RQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMI 306
R+LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI
Sbjct: 181 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 240
Query: 307 VDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA 366
DC A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E
Sbjct: 241 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 300
Query: 367 VGGRSTT--------RLW--------------------------AFGLQLNMELQLASQL 392
GG + +LW AFGLQLNMELQLA+QL
Sbjct: 301 GGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 360
Query: 393 SEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQI 452
+EKH+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QI
Sbjct: 361 TEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQI 420
Query: 453 KDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAK 512
KDI +WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAK
Sbjct: 421 KDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAK 480
Query: 513 EIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFR 572
E+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+
Sbjct: 481 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 540
Query: 573 DAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
D + SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKV
Sbjct: 541 DIDDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKV 600
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGL V EAMGKSLVHDL+++E VD +L+HAL+GEE+KNVEIKLRTFG + +KKA
Sbjct: 601 AELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKA 660
Query: 693 VFVVVNACSSKDYTNNIVG 711
+++VVNACSS+DYT+NIVG
Sbjct: 661 IYLVVNACSSRDYTDNIVG 679
>gi|218683943|gb|ACL00925.1| phytochrome D [Thlaspi perfoliatum]
Length = 616
Score = 973 bits (2514), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/618 (75%), Positives = 522/618 (84%), Gaps = 33/618 (5%)
Query: 220 AVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEP 279
AVRAIS LQSLP GDIKLLCDTVVESVR LTGYDRVMV +FHEDEHGEV+AESKR DLEP
Sbjct: 1 AVRAISHLQSLPRGDIKLLCDTVVESVRDLTGYDRVMVDKFHEDEHGEVIAESKRDDLEP 60
Query: 280 YFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGC 339
Y GLHYPATDIPQASRFLFKQ+RVRMIVDCHA+P+ V+Q++ L Q +CLVGSTLRAPHGC
Sbjct: 61 YIGLHYPATDIPQASRFLFKQSRVRMIVDCHASPVRVVQEDRLTQSICLVGSTLRAPHGC 120
Query: 340 HAQYMANMGSIASLALAVIINGNDEEAVGGRS-----TTRLW------------------ 376
HAQYMANMGSIASL +AVIINGN+E+ G + + RLW
Sbjct: 121 HAQYMANMGSIASLGMAVIINGNEEDGNGVNNGGGRNSMRLWGLVVCHHTSARCIPFPLR 180
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA Q++EK VLR QTLLCDMLLRDSPAGIVTQSPSIMDLVK
Sbjct: 181 YACEFLMQAFGLQLNMELQLALQVAEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVK 240
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
C+G A YQGKYY LGV P+E QI DIVEWLL H DSTGL TDSL DAGYP+A+ LGD
Sbjct: 241 CNGEAFLYQGKYYSLGVAPSEAQINDIVEWLLANHSDSTGLRTDSLGDAGYPRASVLGDD 300
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMAVAYITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR
Sbjct: 301 VCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 360
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
S PW+ AEMDA HSLQLILRDSF+++EA +S +V A+ ++ QG++E+ +VAREMVRL
Sbjct: 361 SQPWEAAEMDATHSLQLILRDSFKESEARDS--IVAAERENMTEQGMEEIGAVAREMVRL 418
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETA PIFAVD+ GC+NGWNAK+AE+TGLSVEEAMGKS+V DL+Y+E EE VD LL A
Sbjct: 419 IETAKVPIFAVDMDGCINGWNAKIAEMTGLSVEEAMGKSVVRDLIYRECEEAVDMLLSRA 478
Query: 669 LKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDK 728
LKG+E KNVE+KL+TFG E + KAVFVVVNACSSKD+ +NIVGVCFVGQDVT QK+VMDK
Sbjct: 479 LKGDEGKNVEVKLKTFGPELQGKAVFVVVNACSSKDHLSNIVGVCFVGQDVTSQKIVMDK 538
Query: 729 FIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFG 788
FI+IQGDYKAI+H+PNPLIPPIFA+DENTCC+EWNTAMEKLTGWSRG +IGK+LV EVFG
Sbjct: 539 FINIQGDYKAIIHTPNPLIPPIFAADENTCCTEWNTAMEKLTGWSRGQVIGKLLVKEVFG 598
Query: 789 SCCRLKGPDALTKFMIAL 806
SCCRL+GPD LTKFMI L
Sbjct: 599 SCCRLRGPDELTKFMIVL 616
>gi|406685259|gb|AFS51070.1| phytochrome P, partial [Sciadopitys verticillata]
Length = 642
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/642 (72%), Positives = 534/642 (83%), Gaps = 31/642 (4%)
Query: 100 GCTIAVDEATFRVIAYSENAGEMLGLAPQSVP----NLEKQEILTIGTDVRTLFTSSSSV 155
GC +AV+E++F +IAYSENA EML L P VP +E +L IGTD R+LF+ SS+
Sbjct: 1 GCMLAVEESSFNIIAYSENAVEMLDLMPHYVPVNNMEMEGGGVLRIGTDARSLFSPSSAR 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTE-DPALSIAGAV 214
+EKA A+EI+L+NPIW+H K +GKPFYAILHR+DVG+VID EP RT D +LS AG V
Sbjct: 61 AMEKAAMAQEISLMNPIWMHCKKSGKPFYAILHRIDVGLVIDFEPVRTGGDASLSAAGGV 120
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEVV+E +R
Sbjct: 121 QSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVVSEIRR 180
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V+Q E L QPLCLVGSTLR
Sbjct: 181 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCCATPVKVVQAEELKQPLCLVGSTLR 240
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGSIASL +AVIINGNDEE GRS+ +LW
Sbjct: 241 APHGCHAQYMANMGSIASLVMAVIINGNDEEGASGRSSMKLWGLVVCHHTSPRAVPFPLR 300
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVK
Sbjct: 301 YACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 360
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAALYY G ++ LGVTPTE QIKDI WLL YHGDSTGLSTDSLADAGYP AA+LGDA
Sbjct: 361 CDGAALYYGGMFWLLGVTPTEAQIKDIAHWLLEYHGDSTGLSTDSLADAGYPGAASLGDA 420
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK R
Sbjct: 421 VCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 480
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
SLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+LQG+DELSSVA EMVRL
Sbjct: 481 SLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRL 540
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPI AVD G +NGWNAKVAELTGL V EAMGKSLVHDLV++E E + +L+HA
Sbjct: 541 IETATAPILAVDSSGLINGWNAKVAELTGLPVREAMGKSLVHDLVFEESAEAAEKMLYHA 600
Query: 669 LKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIV 710
L+GEE+KNVEIKLRTFG + +KKA+++VVNACSS+DYT++IV
Sbjct: 601 LRGEEEKNVEIKLRTFGPQRQKKAIYLVVNACSSRDYTDSIV 642
>gi|406685491|gb|AFS51186.1| phytochrome P, partial [Afrocarpus falcatus]
Length = 647
Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/647 (73%), Positives = 536/647 (82%), Gaps = 33/647 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC + V+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLF S++ LEKA A +I+L+NPI +HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFKPFSALALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + L VTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVN
Sbjct: 601 VVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 647
>gi|406685465|gb|AFS51173.1| phytochrome P, partial [Araucaria cunninghamii]
Length = 664
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/664 (71%), Positives = 539/664 (81%), Gaps = 50/664 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDQAMTSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT SS+ LLEKA A EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVMTIGTDVRTLFTPSSARLLEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+VIDLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT--------RLW--------------------------AFGLQLNMELQLASQLSE 394
G + +LW AFGLQLNMELQLA+QL+E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KH+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I +WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+ SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGL V EAMGKSLVHDL+++E VD +L+HAL+GEE+KNVEIKLRTFG + +KKA++
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 695 VVVN 698
+VVN
Sbjct: 661 LVVN 664
>gi|406685485|gb|AFS51183.1| phytochrome P, partial [Wollemia nobilis]
Length = 677
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/677 (70%), Positives = 543/677 (80%), Gaps = 50/677 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFR+IAYSENA EML L QSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENAVEMLDLMSQSVPNMDMDRDDAMGSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVR LFT +S+ LEKA A+EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVITIGTDVRALFTPASAWALEKAAMAQEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTEDPALSIAGA-----VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+VIDLEP RT AG VQSQKLAVRAIS+LQSLP GDI +LCD VVE VR+
Sbjct: 121 MVIDLEPVRTGSGGGGDAGLSAAGAVQSQKLAVRAISRLQSLPAGDIGVLCDAVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEMRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT--------RLW--------------------------AFGLQLNMELQLASQLSE 394
G + +LW AFGLQLNMELQLA+QL E
Sbjct: 301 GSGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLME 360
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
KH+LRTQTLLCDMLLRD+P GI+T SPS MDLVKCDGAALYY G + LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGILTHSPSTMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I +WLL YHGDSTGLSTDSLADA YP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHGDSTGLSTDSLADADYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+ SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGL V EAMGKSLVHDL++ E + +D +L+HAL+GEE+KNVEIKLRTFG + +KKA++
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFHESADTMDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 660
Query: 695 VVVNACSSKDYTNNIVG 711
+VVNACSS+DYT+NIVG
Sbjct: 661 LVVNACSSRDYTDNIVG 677
>gi|406685487|gb|AFS51184.1| phytochrome P, partial [Acmopyle pancheri]
Length = 638
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/638 (73%), Positives = 531/638 (83%), Gaps = 32/638 (5%)
Query: 93 GGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE----KQEILTIGTDVRTL 148
GG IQPFGC +AV+E F++IAYS+NA EML PQSVP +E ILTIGTDVRTL
Sbjct: 1 GGTIQPFGCMLAVEETNFKIIAYSQNALEMLDPMPQSVPTMELGKHGGSILTIGTDVRTL 60
Query: 149 FTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPAL 208
FT SS+ LEKA A +I+L+NPIW+HS+ TGKPF AI+HR+DVGIVIDLEP RT D A+
Sbjct: 61 FTPSSARALEKAAMAPDISLMNPIWVHSQYTGKPFNAIVHRIDVGIVIDLEPLRTGDAAM 120
Query: 209 SIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEV 268
S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEV
Sbjct: 121 STAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEV 180
Query: 269 VAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCL 328
VAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L QPLCL
Sbjct: 181 VAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIFDCSATPVKVIQSEELRQPLCL 240
Query: 329 VGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW---------- 376
VGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 VGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGLSGRSSMKLWGLVVCHHTSP 300
Query: 377 ----------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQS 420
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P GIVTQS
Sbjct: 301 RAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTQS 360
Query: 421 PSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYP 480
PSIMDLVKCDGAALYY + LGVTPTE QIKDI EWLL YHGDSTGLSTDSLADAGYP
Sbjct: 361 PSIMDLVKCDGAALYYGCTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLSTDSLADAGYP 420
Query: 481 KAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 540
AA+LGDAVCGMA A IT +D+LFW+RSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKA
Sbjct: 421 GAASLGDAVCGMAAARITSKDYLFWYRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKA 480
Query: 541 FLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSS 600
FLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+LQG+DELSS
Sbjct: 481 FLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDELSS 540
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
VA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHDLV +E E
Sbjct: 541 VASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHDLVLEESAEC 600
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVN
Sbjct: 601 VEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 638
>gi|218683899|gb|ACL00904.1| phytochrome D [Arabidopsis halleri]
Length = 608
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/608 (76%), Positives = 509/608 (83%), Gaps = 34/608 (5%)
Query: 206 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEH 265
PALSIAGAVQSQKLAVRAIS LQSLPGGDIKLLCDTVV+SVR LTGYDRVMVY+FHEDEH
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEH 60
Query: 266 GEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQP 325
GEVVAESKR DLEPY GLHYPATDIPQASRFLFKQNRVRMIVDC+A+P+ V+QD+ L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQS 120
Query: 326 LCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEA----VGGRSTTRLW----- 376
+CLVGSTLRAPHGCHAQYM NMGSIASLA+A+IINGN+E+ GGR++ RLW
Sbjct: 121 ICLVGSTLRAPHGCHAQYMTNMGSIASLAMAIIINGNEEDGNGVNTGGRNSMRLWGLVVC 180
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA Q+SEK VLR QTLLCDMLLRDSP G
Sbjct: 181 HHTSARCIPFPLRCACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPTG 240
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQ PSIMDLVKC+GAA YQGKYY LGV PTE QI DI EWLL H DSTGLSTDSL
Sbjct: 241 IVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIGEWLLANHSDSTGLSTDSLG 300
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP+AA LGDAVCGMAVA ITKRDFLFWFRSHT KEIKWGGAKHHPEDKDDGQRMHPR
Sbjct: 301 DAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAV----VNAQLVDLE 591
+SF+AFLEVVKSR PW+ AEMDAIHSLQLILRDSF+++EA +SKA V D+
Sbjct: 361 ASFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKASAPGGVQPHGDDMA 420
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
QG+ E+ +VAREM+RLIETAT PIFAVD+ GC+NGWNAK+AELTGLSVEEAMGKSLV D
Sbjct: 421 EQGLQEIGTVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRD 480
Query: 652 LVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
L+YKEYEE D LL ALKG+E KNVE+KL+TF E + KAVFVVVNACSSKDY NNIVG
Sbjct: 481 LIYKEYEETADRLLSCALKGDEGKNVEVKLKTFAPELQGKAVFVVVNACSSKDYLNNIVG 540
Query: 712 VCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTG 771
VCFVGQDV K+VMDKFI+IQGDYKAI+HSPNPLIPPIFA+DENTCC EWNTAMEKLTG
Sbjct: 541 VCFVGQDVIGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEKLTG 600
Query: 772 WSRGDIIG 779
W R ++IG
Sbjct: 601 WPRSEVIG 608
>gi|406685483|gb|AFS51182.1| phytochrome P, partial [Araucaria subulata]
Length = 662
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/662 (71%), Positives = 537/662 (81%), Gaps = 48/662 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVRTLFT+SS+ LEKA A EI+L+NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+V+DLEP RT D ALS AGAVQSQKLAVRAIS LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISGLQSLPAGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT------RLW--------------------------AFGLQLNMELQLASQLSEKH 396
G + +LW AFGLQLNMELQLA+QL+EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
+WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKW 480
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D +
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 577 SNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELT 636
SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 637 GLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
GL V EAMGKSLVHDL+++E +D +L+HAL+GEE+KNVEIKLRTF + +KKA+++V
Sbjct: 601 GLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEIKLRTFAPQKQKKAIYLV 660
Query: 697 VN 698
VN
Sbjct: 661 VN 662
>gi|406685459|gb|AFS51170.1| phytochrome P, partial [Araucaria bidwillii]
Length = 662
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/662 (70%), Positives = 538/662 (81%), Gaps = 48/662 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYL+++QRGG IQPFGC +AV+E +F+++AYSENA EML L+PQSVPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCMLAVEETSFQIVAYSENAVEMLDLSPQSVPNMDMDRDEAMGSH 60
Query: 138 ----ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
++TIGTDVR LFT SS+ LEKA A+EI+++NPIW+HSKNT KPFYAI+HR+DVG
Sbjct: 61 GGGRVITIGTDVRNLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 194 IVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQ 248
+VIDLEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 249 LTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVD 308
LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 309 CHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG 368
C A P+ V+Q L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 241 CRAAPVKVVQAGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 369 GRSTT------RLW--------------------------AFGLQLNMELQLASQLSEKH 396
G + +LW AFGLQLNMELQLA+QL+EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
+WLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D +
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 577 SNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELT 636
SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 637 GLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
GL V EAMGKSL HDL++ E VD +L+HAL+GEE+KNVEIKLRTFG + +KKA+++V
Sbjct: 601 GLPVGEAMGKSLAHDLIFDESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIYLV 660
Query: 697 VN 698
VN
Sbjct: 661 VN 662
>gi|1813953|emb|CAA71838.1| photoreceptor [Ceratodon purpureus]
Length = 1299
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/785 (59%), Positives = 583/785 (74%), Gaps = 36/785 (4%)
Query: 21 SGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPE 80
S T++ ++ H S +AQ T DA L AV+E SG+SG SFDYS+SV + SVP
Sbjct: 1 SSTTSAKSKH--------SVRVAQTTADAALEAVYEMSGDSGDSFDYSKSVGQSAESVPA 52
Query: 81 QQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILT 140
++AYL ++QRGG IQ FGC +AV+E F VIAYSENA E L L PQ+VP++ + ++L
Sbjct: 53 GAVTAYLQRMQRGGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDVLG 112
Query: 141 IGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP 200
IGTD+RTLFT SSS LEKA ++I+LLNPI +H + +GKP YAI HR+D+GIVID E
Sbjct: 113 IGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDFEA 172
Query: 201 ARTED-PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
+ D P + AGA+QS KLA RAI++LQ+LPGGDI+LLCDT+VE VR+LTGYDRVM ++
Sbjct: 173 VKMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMAFK 232
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFL +NRVR+I DC+A+P+ +IQD
Sbjct: 233 FHEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLIQD 292
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR-LWA- 377
+ QP+ L GSTLRAPHGCHAQYM NMGSIASL +AVIIN N+E + G R LW
Sbjct: 293 LDIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQRGRKLWGL 352
Query: 378 -------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 412
FG+QLN+ ++L +QL EKH+LRTQTLLCDMLLRD+
Sbjct: 353 VVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELGAQLREKHILRTQTLLCDMLLRDA 412
Query: 413 PAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTD 472
P GIV+Q+P+IMDLVKCDGAALYY + + LG TPTE QIK+I +WLL +H DSTGLSTD
Sbjct: 413 PIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLSTD 472
Query: 473 SLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 532
SLADA YP A LGDAVCGMA A IT +DFLFWFRSHTA E+KWGGAKH P++KDDG++M
Sbjct: 473 SLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGRKM 532
Query: 533 HPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLEL 592
HPRSSFKAFLEVV RS PW++ EMDAIHSLQLILR SFRD S++K +++A+L DL+L
Sbjct: 533 HPRSSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIADSDTKTMIHARLNDLKL 592
Query: 593 QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDL 652
QGV+E +++A EM R++ETA API AVD G +N WNAK+A++TGL VEEAM SL DL
Sbjct: 593 QGVEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTKDL 652
Query: 653 VYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGV 712
V E +V+ LL AL+GEE++NVEIKL+TFG + ++AV ++VNAC S+D ++ +VGV
Sbjct: 653 VLDESVVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCSRDASDTVVGV 712
Query: 713 CFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGW 772
FVGQDVT+Q++ MD+F IQG K V P+PL+ P F DE + N+A+ L
Sbjct: 713 FFVGQDVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKRNSALGGLKDH 772
Query: 773 SRGDI 777
+ G +
Sbjct: 773 ATGSV 777
>gi|2851597|sp|P25848.3|PHY1_CERPU RecName: Full=Light-sensor Protein kinase; Includes: RecName:
Full=Phytochrome; Includes: RecName: Full=Protein kinase
gi|1839248|gb|AAB47762.1| phytochrome [Ceratodon purpureus]
Length = 1307
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/792 (58%), Positives = 585/792 (73%), Gaps = 36/792 (4%)
Query: 14 SQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRT 73
S + S T++ ++ H S +AQ T DA L AV+E SG+SG SFDYS+SV
Sbjct: 2 SATKKTYSSTTSAKSKH--------SVRVAQTTADAALEAVYEMSGDSGDSFDYSKSVGQ 53
Query: 74 MSHSVPEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNL 133
+ SVP ++AYL ++QR G IQ FGC +AV+E F VIAYSENA E L L PQ+VP++
Sbjct: 54 SAESVPAGAVTAYLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSM 113
Query: 134 EKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
+ ++L IGTD+RTLFT SSS LEKA ++I+LLNPI +H + +GKP YAI HR+D+G
Sbjct: 114 GEMDVLGIGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIG 173
Query: 194 IVIDLEPARTED-PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGY 252
IVID E + D P + AGA+QS KLA RAI++LQ+LPGGDI+LLCDT+VE VR+LTGY
Sbjct: 174 IVIDFEAVKMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGY 233
Query: 253 DRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 312
DRVM ++FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFL +NRVR+I DC+A+
Sbjct: 234 DRVMAFKFHEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYAS 293
Query: 313 PLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST 372
P+ +IQD + QP+ L GSTLRAPHGCHAQYM NMGSIASL +AVIIN N+E + G
Sbjct: 294 PVKLIQDPDIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQR 353
Query: 373 TR-LWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
R LW FG+QLN+ ++LA+QL EKH+LRTQTLLC
Sbjct: 354 GRKLWGLVVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQTLLC 413
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DMLLRD+P GIV+Q+P+IMDLVKCDGAALYY + + LG TPTE QIK+I +WLL +H D
Sbjct: 414 DMLLRDAPIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHND 473
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSLADA YP A LGDAVCGMA A IT +DFLFWFRSHTA E+KWGGAKH P++
Sbjct: 474 STGLSTDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDE 533
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNA 585
KDDG++MHPRSSFKAFLEVV RS PW++ EMDAIHSLQLILR SFRD S++K +++A
Sbjct: 534 KDDGRKMHPRSSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIADSDTKTMIHA 593
Query: 586 QLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMG 645
+L DL+LQGV+E +++A EM R++ETA API AVD G +N WNAK+A++TGL VEEAM
Sbjct: 594 RLNDLKLQGVEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMH 653
Query: 646 KSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDY 705
SL DLV E +V+ LL AL+GEE++NVEIKL+TFG + ++AV ++VNAC S+D
Sbjct: 654 CSLTKDLVLDESVVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCSRDA 713
Query: 706 TNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTA 765
++ +VGV FVGQDVT+Q++ MD+F IQG K V P+PL+ P F DE + N+A
Sbjct: 714 SDFVVGVFFVGQDVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKRNSA 773
Query: 766 MEKLTGWSRGDI 777
+ L + G +
Sbjct: 774 LGGLKDHATGSV 785
>gi|406685543|gb|AFS51212.1| phytochrome P, partial [Podocarpus acutifolius]
Length = 619
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/619 (73%), Positives = 514/619 (83%), Gaps = 33/619 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE-----KQEIL 139
AYLS++QRGG IQPFGC +AV+E F++IAYS+NA EML L PQSVP +E E+L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 140 TIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLE 199
TIGTDVRTLFT+SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+VIDLE
Sbjct: 61 TIGTDVRTLFTASSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 200 PARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYR 259
P RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 260 FHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQD 319
FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 320 EGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLW- 376
E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLWG 300
Query: 377 -------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD 411
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 412 SPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLST 471
+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTGLST
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 472 DSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQR 531
DSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+R
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 532 MHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLE 591
MHPRSSFKAFLEVVK R LPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+
Sbjct: 481 MHPRSSFKAFLEVVKRRGLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTDLK 540
Query: 592 LQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHD 651
LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLVHD
Sbjct: 541 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHD 600
Query: 652 LVYKEYEEIVDNLLHHALK 670
+V +E E ++ +L+ AL+
Sbjct: 601 VVLEESAECLEKMLYRALR 619
>gi|406685275|gb|AFS51078.1| phytochrome P, partial [Cephalotaxus mannii]
Length = 675
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/676 (69%), Positives = 541/676 (80%), Gaps = 50/676 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS--------VPNLEKQ 136
AYLS++QRGG IQPFGC +AV+E +F++IAYSENA EML + P S VP +E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSVPTMEGG 60
Query: 137 E---ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVG 193
E I+TIG+DVR LFT SS LE+A ++EI+L NPI + S N+GKPFYAI+HR+DVG
Sbjct: 61 ESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMDS-NSGKPFYAIVHRIDVG 119
Query: 194 IVIDLEPARTEDPALSIA--------GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
IVIDLE R D A ++ G V SQ+LAVRA S+LQ++P GDI LLCDTVVE
Sbjct: 120 IVIDLELVRRGDAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEE 179
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRM
Sbjct: 180 VRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRM 239
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN--D 363
I DC ATP+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN D
Sbjct: 240 ICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGND 299
Query: 364 EEAVGG--RSTTRLWA--------------------------FGLQLNMELQLASQLSEK 395
E+ V G RS+ +LW FGLQ+NMELQLA+QL+E
Sbjct: 300 EDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLTEN 359
Query: 396 HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 455
++LRTQTLLCDMLLRD+P GIV+QSPSIMDLVKCDGAALYY G ++ LGVTP E QIKDI
Sbjct: 360 NILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMFWLLGVTPVEAQIKDI 419
Query: 456 VEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 515
+WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+K
Sbjct: 420 ADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMK 479
Query: 516 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
WGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF D +
Sbjct: 480 WGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFEDID 539
Query: 576 ASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAEL 635
S++K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV EL
Sbjct: 540 DSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNAKVGEL 599
Query: 636 TGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFV 695
TGL V EAMGKSLVHDLV++E E V+ +L+HAL+GEE+KNVEIKLRTFG + +KK +++
Sbjct: 600 TGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIYL 659
Query: 696 VVNACSSKDYTNNIVG 711
VVNACSS+DYT+NIVG
Sbjct: 660 VVNACSSRDYTDNIVG 675
>gi|406685441|gb|AFS51161.1| phytochrome P, partial [Agathis macrophylla]
Length = 655
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/657 (70%), Positives = 531/657 (80%), Gaps = 45/657 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFRVIAYSENA EML L PQSVPN++++E
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRVIAYSENALEMLDLMPQSVPNMDREEAMGSHGG 60
Query: 138 --ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
++TIGTDVR LFT S+ LEKA A+EI+L+NPI +HS+NT KPFYAI+HR+DVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 196 IDLEPARTEDPALSIAG-----AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
IDLEP RT + G +VQSQKLAVRAIS+LQS GDI +LCDTVVE VR+LT
Sbjct: 121 IDLEPVRTGSGGGGVGGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 371 STT---RLW--------------------------AFGLQLNMELQLASQLSEKHVLRTQ 401
S +LW AFGLQLNMELQ+A+QL+EKH+LRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 402 TLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLT 461
TLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 462 YHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKH 521
YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFW RSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWLRSHTAKEMKWGGAKH 478
Query: 522 HPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA 581
HP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K
Sbjct: 479 HPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+V+ +L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
EAMGKSLVHDL++ E + VD +L HAL+GEE+KN+EIKLRTFG + +K+A+++VVN
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNIEIKLRTFGPQKQKRAIYLVVN 655
>gi|406685449|gb|AFS51165.1| phytochrome P, partial [Agathis robusta]
Length = 655
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/657 (70%), Positives = 531/657 (80%), Gaps = 45/657 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFR+IAYSENA EML L PQSVPN+++ E
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 138 --ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
++TIGTDVR LFT S+ LEKA A+EI+L+NPI +HS+NT KPFYAI+HR+DVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 196 IDLEPARTEDPALSIAG-----AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
IDLEP RT +AG +VQSQKLAVRAIS+LQS GDI +LCDTVVE VR+LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 371 STT---RLW--------------------------AFGLQLNMELQLASQLSEKHVLRTQ 401
S +LW AFGLQLNMELQ+A+QL+EKH+LRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 402 TLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLT 461
TLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 462 YHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKH 521
YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKH 478
Query: 522 HPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA 581
HP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K
Sbjct: 479 HPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+V+ +L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
EAMGKSLVHDL++ E + VD +L AL+GEE+KNVEIKLRTFG + +KKA+++VVN
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCRALRGEEEKNVEIKLRTFGPQKQKKAIYLVVN 655
>gi|406685307|gb|AFS51094.1| phytochrome P, partial [Torreya taxifolia]
Length = 675
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/676 (69%), Positives = 538/676 (79%), Gaps = 50/676 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAP--QSVPNLEKQE----- 137
AYLS++QRGG IQPFGC +AV+E +F++IAYSENA EML + P QSVPN+E ++
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHFQSVPNMEGRDGDSDG 60
Query: 138 ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVID 197
LTIG+DVR LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVGIVID
Sbjct: 61 FLTIGSDVRRLFTPSSGRNLERAAMAQEISLTNPIAMES-NSGKPFYAIVHRIDVGIVID 119
Query: 198 LEPARTEDPALSIAGA--------VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQL 249
LEP R D A ++ A V SQ+LAVRA S+LQS+P GDI LLCDTVVE VR+L
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVREL 179
Query: 250 TGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDC 309
TGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 180 TGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDC 239
Query: 310 HATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN--DEEAV 367
ATP+ V Q E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN DE+ V
Sbjct: 240 RATPVKVKQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGIDEDGV 299
Query: 368 GGRSTT------RLWA--------------------------FGLQLNMELQLASQLSEK 395
G + +LW FGLQ+NMELQLA+QL E
Sbjct: 300 SGSGSGSGRSSIKLWGLVVCHHTSPRAVSFPLRSACEFLMQTFGLQINMELQLAAQLIEN 359
Query: 396 HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 455
+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G ++ LGVTPTE Q+KDI
Sbjct: 360 SILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLKDI 419
Query: 456 VEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 515
+WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+K
Sbjct: 420 ADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMK 479
Query: 516 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
WGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS PW+N EMDAIHSLQLILR SF+D +
Sbjct: 480 WGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDID 539
Query: 576 ASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAEL 635
S +K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV EL
Sbjct: 540 DSGTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGEL 599
Query: 636 TGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFV 695
TGL V EAMGKSLVHDLV++E E V+ +L+HAL+GEE+KNVEIKLRTFG + +KK +++
Sbjct: 600 TGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIYL 659
Query: 696 VVNACSSKDYTNNIVG 711
VVNACSS+DYT+ IVG
Sbjct: 660 VVNACSSRDYTDKIVG 675
>gi|406685437|gb|AFS51159.1| phytochrome P, partial [Agathis dammara]
Length = 655
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/657 (70%), Positives = 530/657 (80%), Gaps = 45/657 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFR+IAYSENA EML L PQSVPN+++ E
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 138 --ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
++TIGTDVR LFT S+ LEKA A+EI+L+NPI +HS+NT KPFYAI+HR+DVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 196 IDLEPARTEDPALSIAG-----AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
IDLEP RT +AG +VQSQKLAVRAIS+LQS GDI +LCDTVVE VR+LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 371 STT---RLW--------------------------AFGLQLNMELQLASQLSEKHVLRTQ 401
S +LW AFGLQLNMELQ+A+QL+EKH+LRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 402 TLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLT 461
TLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPT QIKDI +WLL
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTGAQIKDIADWLLE 418
Query: 462 YHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKH 521
YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKH 478
Query: 522 HPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA 581
HP+DKDD +RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K
Sbjct: 479 HPDDKDDSRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+V+ +L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
EAMGKSLVHDL++ E + VD +L HAL+GEE+KNVEIKLRTFG + +KKA+++VVN
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVVN 655
>gi|406685451|gb|AFS51166.1| phytochrome P, partial [Agathis silbae]
Length = 655
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/657 (70%), Positives = 529/657 (80%), Gaps = 45/657 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFR+IAYSENA EML L PQSVPN+++ E
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 138 --ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
++TIGTDVR LFT S+ LEKA A+EI+L+NPI +HS+ T KPFYAI+HR+DVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQKTNKPFYAIVHRIDVGMV 120
Query: 196 IDLEPARTEDPALSIAG-----AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
IDLEP RT + G +VQSQKLAVRAIS+LQS GDI +LCDTVVE VR+LT
Sbjct: 121 IDLEPVRTGSGGGGVGGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 371 STT---RLW--------------------------AFGLQLNMELQLASQLSEKHVLRTQ 401
S +LW AFGLQLNMEL++A+QL+EKH+LRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELRVAAQLTEKHILRTQ 358
Query: 402 TLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLT 461
TLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 462 YHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKH 521
YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFW RSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWLRSHTAKEMKWGGAKH 478
Query: 522 HPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA 581
HP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K
Sbjct: 479 HPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+V+ +L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
EAMGKSLVHDL++ E + VD +L HAL+GEE+KN+EIKLRTFG + +KKA+++VVN
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNIEIKLRTFGPQKQKKAIYLVVN 655
>gi|406685287|gb|AFS51084.1| phytochrome P, partial [Taxus cuspidata]
Length = 670
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/671 (69%), Positives = 537/671 (80%), Gaps = 45/671 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAP-----QSVPNL---EKQ 136
AYLS++QRGG +QPFGC +AV+E++F++IAYSENA EML + P QSVPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPAPSQSQSVPNMVGGESE 60
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
I TIG+D+R LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVGIVI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDS-NSGKPFYAIVHRIDVGIVI 119
Query: 197 DLEPARTEDPALSIA----GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGY 252
DLEP R D A ++ G+V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 253 DRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 312
DRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC AT
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 313 PLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG--- 369
P+ VIQ L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 370 ---RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRT 400
RS+ +LW FGLQ+NMELQLA+QL E ++LRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTP E QIKDI EWLL
Sbjct: 360 QTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
+V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
EAMGKSLVHDLV+ E E V+ +L+HA++GEE+KNVEIKLRTFG + +KK +++VVNAC
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNAC 659
Query: 701 SSKDYTNNIVG 711
SS+DYT+NIVG
Sbjct: 660 SSRDYTDNIVG 670
>gi|406685443|gb|AFS51162.1| phytochrome P, partial [Agathis montana de Laub. 1969]
Length = 659
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/661 (69%), Positives = 530/661 (80%), Gaps = 49/661 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFR+IAYSENA EML L PQSVPN+++ E
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 138 --ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
++TIG DVR LFT S+ LEKA A+EI+L+NPI +HS+NT KPFYAI+HR+DVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 196 IDLEPARTEDPALSIAG-----AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
IDLEP RT +AG +VQSQKLAVRAIS+LQS GDI +LCDTVVE VR+LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN+++ G
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 371 STT-------RLW--------------------------AFGLQLNMELQLASQLSEKHV 397
+ +LW AFGLQLNMELQ+A+QL+EKH+
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 518 GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS 577
GAKHHP+DKDD +RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 578 NSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTG 637
N+K +V+ +L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 638 LSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVV 697
L V EAMGKSLVHDL++ E + VD +L HAL+GEE+KNVEIKLRTFG + +KKA+++VV
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVV 658
Query: 698 N 698
N
Sbjct: 659 N 659
>gi|406685291|gb|AFS51086.1| phytochrome P, partial [Taxus globosa]
Length = 670
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/671 (69%), Positives = 537/671 (80%), Gaps = 45/671 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAP-----QSVPNL---EKQ 136
AYLS++QRGG +QPFGC +AV+E++F++IAYSENA EML + P QSVPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
I TIG+D+R LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVGIVI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDS-NSGKPFYAIVHRIDVGIVI 119
Query: 197 DLEPARTEDPALSIA----GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGY 252
DLEP R D A ++ G+V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 253 DRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 312
DRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC AT
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 313 PLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG--- 369
P+ VIQ L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 370 ---RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRT 400
RS+ +LW FGLQ+NMELQLA+QL E ++LRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTP E QIKDI EWLL
Sbjct: 360 QTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
+V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
EAMGKSLVHDLV+ E E V+ +L+HA++GEE+KNVEIKLRTFG + +KK +++VVNAC
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNAC 659
Query: 701 SSKDYTNNIVG 711
SS+DYT+NIVG
Sbjct: 660 SSRDYTDNIVG 670
>gi|406685301|gb|AFS51091.1| phytochrome P, partial [Torreya grandis]
Length = 675
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/676 (69%), Positives = 537/676 (79%), Gaps = 50/676 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAP--QSVPNLEKQE----- 137
AYLS++QRGG IQPFGC +AV+E +F++IAYSENA EML + P QSVPN+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHFQSVPNMEGRGGDCDG 60
Query: 138 ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVID 197
LTIG+DVR LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVGIVID
Sbjct: 61 FLTIGSDVRRLFTPSSGRNLERAAMAQEISLTNPIAMES-NSGKPFYAIVHRIDVGIVID 119
Query: 198 LEPARTEDPALSIAGA--------VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQL 249
LEP R D A ++ A V SQ+LAVRA S+LQS+P GDI LLCDTVVE VR+L
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVREL 179
Query: 250 TGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDC 309
TGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 180 TGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDC 239
Query: 310 HATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN--DEEAV 367
ATP+ V Q E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN DE+ V
Sbjct: 240 RATPVKVKQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGIDEDGV 299
Query: 368 GGRSTT------RLWA--------------------------FGLQLNMELQLASQLSEK 395
G + +LW FGLQ+NMELQLA+QL E
Sbjct: 300 TGSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIEN 359
Query: 396 HVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDI 455
+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G ++ LGVTPTE Q+KDI
Sbjct: 360 SILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLKDI 419
Query: 456 VEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIK 515
+WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+K
Sbjct: 420 ADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMK 479
Query: 516 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAE 575
WGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS PW+N EMDAIHSLQLILR SF+D +
Sbjct: 480 WGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDID 539
Query: 576 ASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAEL 635
S +K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV EL
Sbjct: 540 DSGTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGEL 599
Query: 636 TGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFV 695
TGL V EAMGKSLVHDLV++E E V+ +L+HAL+GEE+KNVEIKLRTFG + +KK +++
Sbjct: 600 TGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIYL 659
Query: 696 VVNACSSKDYTNNIVG 711
VVNACSS+DYT+ IVG
Sbjct: 660 VVNACSSRDYTDKIVG 675
>gi|406685289|gb|AFS51085.1| phytochrome P, partial [Taxus floridana]
Length = 670
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/671 (69%), Positives = 536/671 (79%), Gaps = 45/671 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAP-----QSVPNL---EKQ 136
AYLS++QRGG +QPFGC +AV+E++F++IAYSENA EML + P QSVPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
I TIG+D+R LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVGI I
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDS-NSGKPFYAIVHRIDVGIAI 119
Query: 197 DLEPARTEDPALSIA----GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGY 252
DLEP R D A ++ G+V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 253 DRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 312
DRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC AT
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 313 PLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG--- 369
P+ VIQ L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN
Sbjct: 240 PVKVIQPGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 370 ---RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRT 400
RS+ +LW FGLQ+NMELQLA+QL E ++LRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTP E QIKDI EWLL
Sbjct: 360 QTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
+V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
EAMGKSLVHDLV+ E E V+ +L+HA++GEE+KNVEIKLRTFG + +KK +++VVNAC
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNAC 659
Query: 701 SSKDYTNNIVG 711
SS+DYT+NIVG
Sbjct: 660 SSRDYTDNIVG 670
>gi|406685439|gb|AFS51160.1| phytochrome P, partial [Agathis lanceolata]
Length = 659
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/661 (69%), Positives = 529/661 (80%), Gaps = 49/661 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFR+IAYSENA EML L PQSVPN+++ E
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGR 60
Query: 138 --ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
++TIG DVR LFT S+ LEKA A+EI+L+NPI +HS+NT KPFYAI+HR+DVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 196 IDLEPARTEDPALSIAG-----AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
IDLEP RT +AG +VQSQKLAVRAIS+LQS GDI +LCDTVVE VR+LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 371 STT-------RLW--------------------------AFGLQLNMELQLASQLSEKHV 397
+ +LW AFGLQLNMELQ+A+QL+EKH+
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFL WFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLSWFRSHTAKEMKWG 478
Query: 518 GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS 577
GAKHHP+DKDD +RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 578 NSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTG 637
N+K +V+ +L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 638 LSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVV 697
L V EAMGKSLVHDL++ E + VD +L HAL+GEE+KNVEIKLRTFG + +KKA++++V
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLLV 658
Query: 698 N 698
N
Sbjct: 659 N 659
>gi|406685435|gb|AFS51158.1| phytochrome P, partial [Agathis corbassonii]
Length = 659
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/661 (69%), Positives = 529/661 (80%), Gaps = 49/661 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFR+IAYSENA EML L PQSVPN+++ E
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 138 --ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
++TIG DVR LFT S+ LEKA A+EI+L+NPI +HS+NT KPFYAI+HR+DVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 196 IDLEPARTEDPALSIAG-----AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
IDLEP RT +AG +VQSQKLAVRAIS+LQS GDI +LCDTVVE VR+LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ E L QPLCLVGSTLRAP GCHAQYMANMGSIASL +AV+INGN+++ G
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPRGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 371 STT-------RLW--------------------------AFGLQLNMELQLASQLSEKHV 397
+ +LW AFGLQLNMELQ+A+QL+EKH+
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 518 GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS 577
GAKHHP+DKDD +RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 578 NSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTG 637
N+K +V+ +L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 638 LSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVV 697
L V EAMGKSLVHDL++ E + VD +L HAL+GEE+KNVEIKLRTFG + +KKA+++VV
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVV 658
Query: 698 N 698
N
Sbjct: 659 N 659
>gi|406685445|gb|AFS51163.1| phytochrome P, partial [Agathis moorei]
Length = 659
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/661 (69%), Positives = 529/661 (80%), Gaps = 49/661 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFR+IAYS+NA EML L PQSVPN+++ E
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSDNALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 138 --ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
++TIG DVR LFT S+ LEKA A+EI+L+NPI +HS+NT KPFYAI+HR+DVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 196 IDLEPARTEDPALSIAG-----AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
IDLEP RT +AG +VQSQKLAVRAIS+LQS GD+ +LCDTVVE VR+LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDVGVLCDTVVEDVRELT 178
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN+++ G
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 371 STT-------RLW--------------------------AFGLQLNMELQLASQLSEKHV 397
+ +LW AFGLQLNMELQ+A+QL+EKH+
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 518 GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS 577
GAKHHP+DKDD +RMHPRSSFKAFLEV+K RSLPW+N EMDAIHSLQLILR SF+D + S
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVIKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 578 NSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTG 637
N+K +V+ +L DL+LQG+DELS VA EMVRLIETATAPI AVD + +NGWNAKVAELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNALINGWNAKVAELTG 598
Query: 638 LSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVV 697
L V EAMGKSLVHDL++ E + VD +L HAL+GEE+KNVEIKLRTFG + +KKA+++VV
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVV 658
Query: 698 N 698
N
Sbjct: 659 N 659
>gi|406685281|gb|AFS51081.1| phytochrome P, partial [Taxus baccata]
Length = 670
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/671 (69%), Positives = 536/671 (79%), Gaps = 45/671 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAP-----QSVPNL---EKQ 136
AYLS++QRGG +QPFGC +AV+E++F++IAYSENA EML + P QSVPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
I TIG+D+R LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVGIVI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDS-NSGKPFYAIVHRIDVGIVI 119
Query: 197 DLEPARTEDPALSIA----GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGY 252
DLEP R D A ++ G+V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 253 DRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 312
DRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIP+ASRFLF QNRVRMI DC AT
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCRAT 239
Query: 313 PLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG--- 369
P+ VIQ L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 370 ---RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRT 400
RS+ +LW FGLQ+NMELQLA+QL E ++LRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRD+P GI+TQSPSIMDLVKCDGAALYY G + LGVTP E QIKDI EWLL
Sbjct: 360 QTLLCDMLLRDAPIGILTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLF FRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFRFRSHTAKEMKWGGAK 479
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
+V+AQL DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL V
Sbjct: 540 TMVHAQLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
EAMGKSLVHDLV+ E E V+ +L+HA++GEE+KNVEIKLRTFG + +KK +++VVNAC
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNAC 659
Query: 701 SSKDYTNNIVG 711
SS+DYT+NIVG
Sbjct: 660 SSRDYTDNIVG 670
>gi|406685447|gb|AFS51164.1| phytochrome P, partial [Agathis ovata]
Length = 659
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/661 (69%), Positives = 528/661 (79%), Gaps = 49/661 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFR+IAYS+NA EML L PQSVPN+++ E
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSKNALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 138 --ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
++TIG DVR LFT S+ LEKA A+EI+L+NPI +HS+NT KPF AI+HR+DVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFCAIVHRIDVGMV 120
Query: 196 IDLEPARTEDPALSIAG-----AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
IDLEP RT +AG +VQSQKLAVR IS+LQS GDI +LCDTVVE VR+LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRTISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN+++ G
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 371 STT-------RLW--------------------------AFGLQLNMELQLASQLSEKHV 397
+ +LW AFGLQLNMELQ+A+QL+EKH+
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 518 GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS 577
GAKHHP+DKDD +RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 578 NSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTG 637
N+K +V+ +L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 638 LSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVV 697
L V EAMGKSLVHDL++ E + VD +L HAL+GEE+KNVEIKLRTFG + +KKA+++VV
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVV 658
Query: 698 N 698
N
Sbjct: 659 N 659
>gi|406685669|gb|AFS51275.1| phytochrome P, partial [Taxus canadensis]
Length = 670
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/671 (69%), Positives = 535/671 (79%), Gaps = 45/671 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAP-----QSVPNL---EKQ 136
AYLS++QRGG +QPFGC +AV+E++F++IAYSENA EML + P QSVPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
I TIG+D+R LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVGIVI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDS-NSGKPFYAIVHRIDVGIVI 119
Query: 197 DLEPARTEDPALSIA----GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGY 252
DLEP R D A ++ G+V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 253 DRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 312
DRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC AT
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 313 PLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG--- 369
P+ VIQ L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 370 ---RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRT 400
RS+ +LW FGLQ+NMELQLA+QL E ++LRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTP E QIKDI EWLL
Sbjct: 360 QTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
+V+A+L DL+LQG+DELSSVA MVRLIETATAPI AVD G VNGWNAKV ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASGMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
EAMGKSLVHDLV+ E E V+ +L+HA++GEE+KNVEIKLRTFG + +KK +++VVNA
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNAY 659
Query: 701 SSKDYTNNIVG 711
SS+DYT+NIVG
Sbjct: 660 SSRDYTDNIVG 670
>gi|406685265|gb|AFS51073.1| phytochrome P, partial [Amentotaxus poilanei]
Length = 674
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/675 (68%), Positives = 535/675 (79%), Gaps = 49/675 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS--VPNLEKQE----- 137
AYLS++QRGG IQPFGC +AV+E +F++IAYSENA EML + P S V N+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 138 ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVID 197
LTIG+D+R LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVGIVI
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAMES-NSGKPFYAIVHRIDVGIVIG 119
Query: 198 LEPARTEDPALSIAGA-------VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
LEP R D A ++ A V SQ+LAVRA S+LQS+P GDI LLCDTVVE VR+LT
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELT 179
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 239
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVG 368
ATP+ V Q E L QPLCLVGSTLRAPHGCH+QYMANMGSIASL +AVI+NGN DE+ V
Sbjct: 240 ATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNGNGIDEDGVS 299
Query: 369 GRSTT------RLWA--------------------------FGLQLNMELQLASQLSEKH 396
G + +LW FGLQ+NMELQLA+QL E
Sbjct: 300 GSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENS 359
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G ++ LGVTPTE Q+KDI
Sbjct: 360 ILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLKDIA 419
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
+WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 420 DWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAKEMKW 479
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS PW+N EMDAIHSLQLILR SF+D +
Sbjct: 480 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIDD 539
Query: 577 SNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELT 636
S++K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV ELT
Sbjct: 540 SDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELT 599
Query: 637 GLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
GL V EAMGKSLVHDLV++E E V+ +L+HAL+GEE+KNVEIKLRTFG + +KK +++V
Sbjct: 600 GLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIYLV 659
Query: 697 VNACSSKDYTNNIVG 711
+NACSS+DYT+ IVG
Sbjct: 660 INACSSRDYTDKIVG 674
>gi|406685263|gb|AFS51072.1| phytochrome P, partial [Amentotaxus formosana]
Length = 676
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/677 (68%), Positives = 536/677 (79%), Gaps = 51/677 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS--VPNLEKQE----- 137
AYLS++QRGG IQPFGC +AV+E +F++IAYSENA EML + P S V N+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 138 ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVID 197
LTIG+D+R LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVG+VID
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAMES-NSGKPFYAIVHRIDVGMVID 119
Query: 198 LEPARTEDPALSIAGA-------VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
LEP R D A ++ A V SQ+LAVRA S+LQS+P GDI LLCDTVVE VR+LT
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELT 179
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCC 239
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVG 368
ATP+ V Q E L QPLCLVGSTLRAPHGCH+QYMANMGSIASL +AVI+NGN DE+ V
Sbjct: 240 ATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNGNGIDEDGVS 299
Query: 369 GRSTT--------RLWA--------------------------FGLQLNMELQLASQLSE 394
G + +LW FGLQ+NMELQLA+QL E
Sbjct: 300 GSESGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIE 359
Query: 395 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKD 454
+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G ++ LGVTPTE Q+KD
Sbjct: 360 NSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLKD 419
Query: 455 IVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEI 514
I +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 420 IADWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAKEM 479
Query: 515 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDA 574
KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS PW+N EMDAIHSLQLILR SF+D
Sbjct: 480 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDI 539
Query: 575 EASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAE 634
+ S++K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV E
Sbjct: 540 DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGE 599
Query: 635 LTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVF 694
LTGL V EAMGKSLVHDLV++E E V+ +L+HAL+GEE+KNVEIKLRTFG + +KK ++
Sbjct: 600 LTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIY 659
Query: 695 VVVNACSSKDYTNNIVG 711
+V+NACSS+DYT+ IVG
Sbjct: 660 LVINACSSRDYTDKIVG 676
>gi|406685267|gb|AFS51074.1| phytochrome P, partial [Amentotaxus yunnanensis]
Length = 674
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/675 (68%), Positives = 535/675 (79%), Gaps = 49/675 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS--VPNLEKQE----- 137
AYLS++QRGG IQPFGC +AV+E +F++IAYSENA EML + P S V N+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 138 ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVID 197
LTIG+D+R LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVGIVID
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAMES-NSGKPFYAIVHRIDVGIVID 119
Query: 198 LEPARTEDPALSIAGA-------VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
LEP R D A ++ A V SQ+LAVRA S+LQS+P GDI LLCDTVVE VR+LT
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELT 179
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 239
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVG 368
ATP+ V Q E L QPLCLVGSTLRAPHGCH+QYMANMGSIASL +AVI+NGN DE+ V
Sbjct: 240 ATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNGNGIDEDGVS 299
Query: 369 GRSTT------RLWA--------------------------FGLQLNMELQLASQLSEKH 396
G + +LW FGLQ+NMELQLA+QL E
Sbjct: 300 GSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENS 359
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALY G ++ LGVTPTE Q+KDI
Sbjct: 360 ILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYCGGMFWLLGVTPTEAQLKDIA 419
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
+WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 420 DWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAKEMKW 479
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS PW+N EMDAIHSLQLILR SF+D +
Sbjct: 480 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIDD 539
Query: 577 SNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELT 636
S++K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV ELT
Sbjct: 540 SDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELT 599
Query: 637 GLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
GL V EAMGKSLVHDLV++E E V+ +L+HAL+GEE+KNVEIKLRTFG + +KK +++V
Sbjct: 600 GLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIYLV 659
Query: 697 VNACSSKDYTNNIVG 711
+NACSS+DYT+ IVG
Sbjct: 660 INACSSRDYTDKIVG 674
>gi|406685283|gb|AFS51082.1| phytochrome P, partial [Taxus brevifolia]
Length = 672
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/673 (68%), Positives = 535/673 (79%), Gaps = 47/673 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS-------VPNL---E 134
AYLS++QRGG +QPFGC +AV+E++F++IAYSENA EML + P VPN+ E
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSQSVPNMVGGE 60
Query: 135 KQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGI 194
+ I TIG+D+R LFT SS LE+A A+EI+L NPI + S ++GKPFYAI+HR+DVGI
Sbjct: 61 SEGIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDS-SSGKPFYAIVHRIDVGI 119
Query: 195 VIDLEPARTEDPALSIA----GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
VIDLEP R D A ++ G+V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LT
Sbjct: 120 VIDLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELT 179
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 239
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG- 369
ATP+ VIQ L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN
Sbjct: 240 ATPVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDG 299
Query: 370 -----RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVL 398
RS+ +LW FGLQ+NMELQLA+QL E ++L
Sbjct: 300 GGGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNIL 359
Query: 399 RTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEW 458
RTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTP E QIKDI EW
Sbjct: 360 RTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEW 419
Query: 459 LLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGG 518
LL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGG
Sbjct: 420 LLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGG 479
Query: 519 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN 578
AKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S+
Sbjct: 480 AKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSD 539
Query: 579 SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGL 638
+K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL
Sbjct: 540 TKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGL 599
Query: 639 SVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
V EAMGKSLVHDLV+ E E V+ +L+HA++GEE+KNVEIKLRTFG + +KK +++VVN
Sbjct: 600 PVGEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVN 659
Query: 699 ACSSKDYTNNIVG 711
ACSS+DYT+NIVG
Sbjct: 660 ACSSRDYTDNIVG 672
>gi|406685433|gb|AFS51157.1| phytochrome P, partial [Agathis borneensis]
Length = 655
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/657 (70%), Positives = 530/657 (80%), Gaps = 45/657 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQE------- 137
AYLS++QRGG IQPFGC +AV+E TFR+IAYSENA EML L PQSVPN+++ E
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 138 --ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIV 195
++TIGTDVR LFT S+ LEKA A+EI+L+NPI +HS+NT KPFYAI+HR+DVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 196 IDLEPARTEDPALSIAG-----AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLT 250
IDLEP RT +AG +VQSQKLAVRAIS+LQS GDI +LCDTVVE VR+LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 251 GYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCH 310
GYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 311 ATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGR 370
A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E G
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGNG 298
Query: 371 STT---RLW--------------------------AFGLQLNMELQLASQLSEKHVLRTQ 401
S +LW AFGLQLNMELQ+A+QL+EKH+LRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 402 TLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLT 461
TLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 462 YHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKH 521
YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKH 478
Query: 522 HPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA 581
HP+DKDD +RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K
Sbjct: 479 HPDDKDDSRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+V+ +L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
EAMGKSLV DL++ E + VD +L HAL+GEE+KNVE+KLRTFG + +KKA+++VVN
Sbjct: 599 EAMGKSLVQDLIFHESADTVDKMLCHALRGEEEKNVEMKLRTFGPQKQKKAIYLVVN 655
>gi|406685293|gb|AFS51087.1| phytochrome P, partial [Taxus fuana]
Length = 670
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/671 (68%), Positives = 535/671 (79%), Gaps = 45/671 (6%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAP-----QSVPNL---EKQ 136
AYLS++QRGG +QPFGC +AV+E++F++IAYSENA EML + P QSVPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
I TIG+D+R LFT SS LE+A A+EI+L NPI + S N+GKPFYAI+HR+DVGIVI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDS-NSGKPFYAIVHRIDVGIVI 119
Query: 197 DLEPARTEDPALSIA----GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGY 252
DLEP R D A ++ G+V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 253 DRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 312
DRVMVY+FHEDE GEVVAE +R DLEPY GLHYPATDIPQASRFLF Q RVRMI DC AT
Sbjct: 180 DRVMVYKFHEDERGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQTRVRMICDCRAT 239
Query: 313 PLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG--- 369
P+ VIQ L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 370 ---RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRT 400
RS+ +LW FGLQ+NMELQLA+QL E ++LRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 401 QTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLL 460
QTLLCDMLLRD+P GI+TQSPSIMDLVKC+GAALYY G + LGVTP E QIKDI EWLL
Sbjct: 360 QTLLCDMLLRDAPIGILTQSPSIMDLVKCEGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 461 TYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAK 520
HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 521 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSK 580
HHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 581 AVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSV 640
+V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 641 EEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNAC 700
EAMGKSLVHDLV+ E + V+ +L+HA++GEE+KNVEIKLRTFG + +K+ +++VVNAC
Sbjct: 600 GEAMGKSLVHDLVFDESVKTVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKEVIYLVVNAC 659
Query: 701 SSKDYTNNIVG 711
SS+DYT+NIVG
Sbjct: 660 SSRDYTDNIVG 670
>gi|406685609|gb|AFS51245.1| phytochrome P, partial [Podocarpus totara]
Length = 600
Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/590 (75%), Positives = 498/590 (84%), Gaps = 28/590 (4%)
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
E+LTIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAATAPDISLMNPIWVHSQCSGKPFNAIVHRIDVGMVI 70
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
DLEP RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
VY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 190
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTR 374
IQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMK 250
Query: 375 LW--------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDML 408
LW AFGLQLNMELQLA+QL+EKH+LRTQTLLCDML
Sbjct: 251 LWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 310
Query: 409 LRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTG 468
LRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTG
Sbjct: 311 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTG 370
Query: 469 LSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 528
LSTDSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDD
Sbjct: 371 LSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 430
Query: 529 GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLV 588
G+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L
Sbjct: 431 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLT 490
Query: 589 DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSL 648
DL+LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSL
Sbjct: 491 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 550
Query: 649 VHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
VHD+V +E E ++ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVN
Sbjct: 551 VHDVVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|406685461|gb|AFS51171.1| phytochrome P, partial [Araucaria biramulata]
Length = 629
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/628 (71%), Positives = 510/628 (81%), Gaps = 50/628 (7%)
Query: 127 PQSVPNLEKQE-----------ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIH 175
PQSVPN++ ++TIGTDVRTLFT+SS+ LEKA A EI+L+NPIW+H
Sbjct: 2 PQSVPNMDMDRDEAMTSHGGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVH 61
Query: 176 SKNTGKPFYAILHRVDVGIVIDLEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSL 230
SKNT KPFYAI+HR+DVG+V+DLEP RT D ALS AGAVQSQKLAVRAIS+LQSL
Sbjct: 62 SKNTNKPFYAIVHRIDVGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSL 121
Query: 231 PGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDI 290
P GDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDI
Sbjct: 122 PAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDI 181
Query: 291 PQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSI 350
PQASRFLF QNRVRMI DC A P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSI
Sbjct: 182 PQASRFLFMQNRVRMICDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSI 241
Query: 351 ASLALAVIINGNDEEAVGGRSTT--------RLW-------------------------- 376
ASL +AV+INGN++E GG + +LW
Sbjct: 242 ASLVMAVVINGNEDEGGGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 301
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY
Sbjct: 302 AFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYY 361
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTPTE QIKDI +WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 362 GGMCWMLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAAR 421
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 422 ITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 481
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI
Sbjct: 482 MDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPI 541
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKN 676
AVD +G +NGWNAKVAELTGL V EAMGKSLVHDL+++E VD +L+HAL+GEE+KN
Sbjct: 542 LAVDSNGLINGWNAKVAELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKN 601
Query: 677 VEIKLRTFGAENRKKAVFVVVNACSSKD 704
VEIKLRTFG + +KKA+++VVNACSS+D
Sbjct: 602 VEIKLRTFGPQKQKKAIYLVVNACSSRD 629
>gi|406685599|gb|AFS51240.1| phytochrome P, partial [Podocarpus salignus]
Length = 600
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/590 (75%), Positives = 497/590 (84%), Gaps = 28/590 (4%)
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
E+LTIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKP AI+HR+DVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPINAIVHRIDVGMVI 70
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
DLEP RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
VY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNV 190
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTR 374
IQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMK 250
Query: 375 LW--------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDML 408
LW AFGLQLNMELQLA+QL+EKH+LRTQTLLCDML
Sbjct: 251 LWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 310
Query: 409 LRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTG 468
LRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTG
Sbjct: 311 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTG 370
Query: 469 LSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 528
LSTDSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDD
Sbjct: 371 LSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 430
Query: 529 GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLV 588
G+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L
Sbjct: 431 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLT 490
Query: 589 DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSL 648
DL+LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSL
Sbjct: 491 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 550
Query: 649 VHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
VHD+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVN
Sbjct: 551 VHDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|406685581|gb|AFS51231.1| phytochrome P, partial [Podocarpus matudae]
Length = 600
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/590 (75%), Positives = 496/590 (84%), Gaps = 28/590 (4%)
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
E LTIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS+ +GKPF AI+HR+DVG+V+
Sbjct: 11 ETLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVV 70
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
DLEP RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
VY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNV 190
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTR 374
IQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMK 250
Query: 375 LW--------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDML 408
LW AFGLQLNMELQLA+QL+EKH+LRTQTLLCDML
Sbjct: 251 LWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 310
Query: 409 LRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTG 468
LRD+P GIVTQSPSIMDLVKCDGAALYY G LGVTPTE QIKDI EWLL YHGDSTG
Sbjct: 311 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTGCLGVTPTEAQIKDIAEWLLEYHGDSTG 370
Query: 469 LSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 528
LSTDSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDD
Sbjct: 371 LSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 430
Query: 529 GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLV 588
G+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L
Sbjct: 431 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTMVHARLT 490
Query: 589 DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSL 648
DL+LQG+DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSL
Sbjct: 491 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 550
Query: 649 VHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
VHD+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVN
Sbjct: 551 VHDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|406685597|gb|AFS51239.1| phytochrome P, partial [Podocarpus rumphii]
Length = 600
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/590 (74%), Positives = 496/590 (84%), Gaps = 28/590 (4%)
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
E+LTIGTDVRTLFT SS+ LEKA A +I+L+NPIW+HS +GKPF AI+HR+DVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVI 70
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
DLEP RT + A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVM
Sbjct: 71 DLEPRRTGEAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
VY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 190
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTR 374
IQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMK 250
Query: 375 LW--------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDML 408
LW AFGLQLNMELQLA+QL+EKH+LRTQTLLCDML
Sbjct: 251 LWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 310
Query: 409 LRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTG 468
LRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTG
Sbjct: 311 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTG 370
Query: 469 LSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 528
LSTDSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDD
Sbjct: 371 LSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 430
Query: 529 GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLV 588
G+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K + +A+L
Sbjct: 431 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMAHARLT 490
Query: 589 DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSL 648
DL+LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSL
Sbjct: 491 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 550
Query: 649 VHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
VHD+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVN
Sbjct: 551 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|406685607|gb|AFS51244.1| phytochrome P, partial [Podocarpus sylvestris]
Length = 600
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/590 (74%), Positives = 496/590 (84%), Gaps = 28/590 (4%)
Query: 137 EILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVI 196
E+LTIGTDVRTLFT SS+ LEKA A +I+L+NP+W+HS +GKPF AI+HR+DVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVI 70
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
DLEP RT D A+S AGAVQSQK AVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
VY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 190
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTR 374
IQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMK 250
Query: 375 L--------------------------WAFGLQLNMELQLASQLSEKHVLRTQTLLCDML 408
L AFGLQLNMELQLA+QL+EKH+LRTQTLLCDML
Sbjct: 251 LRGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 310
Query: 409 LRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTG 468
LRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI EWLL YHGDSTG
Sbjct: 311 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTG 370
Query: 469 LSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 528
LSTDSLADAGYP AATLGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDD
Sbjct: 371 LSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 430
Query: 529 GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLV 588
G+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A+L
Sbjct: 431 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLT 490
Query: 589 DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSL 648
DL+LQG+DELSSVA EMVRLIETATAPI A+D +G VNGWNAKVAELTGL V EAMGKSL
Sbjct: 491 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 550
Query: 649 VHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
VHD+V +E E V+ +L+ AL+GEE+KNVEIKLRTFG + +K+A+++VVN
Sbjct: 551 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|406685645|gb|AFS51263.1| phytochrome P, partial [Picea glauca]
Length = 584
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/583 (75%), Positives = 497/583 (85%), Gaps = 29/583 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E+ E+LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP +
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI+LLCD+VVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVIINGND+E G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+++L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGL 638
DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGL 583
>gi|406685657|gb|AFS51269.1| phytochrome P, partial [Tsuga canadensis]
Length = 584
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/583 (75%), Positives = 494/583 (84%), Gaps = 29/583 (4%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQ--EILTIG 142
AYLS+IQRGG IQPFGC +AV+E TF +IAYSENA EML LAPQSVP++E+ E LTIG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFTIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT++S+ LEKA A+EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP R
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D +S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHE
Sbjct: 121 TGDAVMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG-GRSTTRLW----- 376
MQPLCLVGSTLRAPHGCHAQYMANMGS+ASL +AVIINGND+EA G GR++ +LW
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 377 ---------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAG 415
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IVTQSPSIMDL+KCDGAALYY G + LGVTPTE QIKDI +WLL +HGDSTGLSTDSLA
Sbjct: 361 IVTQSPSIMDLIKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SSFKAFLEVVK RSLPWDN E+DAIHSLQLILR SF+D + S +K +V+A+L DL LQG+
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLRLQGI 540
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGL 638
DELSSVA EMVRLIETATAPI AVD +G VNGWN KVAELTGL
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNGKVAELTGL 583
>gi|363547901|gb|AEW26990.1| phytochrome P [Pinus strobus]
Length = 590
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/592 (75%), Positives = 503/592 (84%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E QE+LTIGTDVRT FT++SS
Sbjct: 2 IQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSME-QEVLTIGTDVRTQFTAASSH 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA +EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VIDLEP D +S AGAVQ
Sbjct: 61 SLEKAAVTQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEP--LGDAFMSAAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHEDEHGEVV E +R
Sbjct: 119 SQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVFEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E LMQPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AVIINGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVIINGNMKLWGLVVCHHTSPRPVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+LRTQTLLCDMLLR +P GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 299 LQLNMELQLAAQLTEKHILRTQTLLCDMLLRHAPMGIVTQSPSIMDLVKCDGAALYYGGK 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL +HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 CWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DF+FWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPWDN E+DA
Sbjct: 419 KDFIFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWDNVEIDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +V++QL DL LQG+DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSGTKTMVHSQLNDLRLQGIDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D +GCVNGWNAKVAELTGL V EAMG SLV DLV++E E V+ +L++AL+G
Sbjct: 539 DYNGCVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEESVESVEKMLYNALRG 590
>gi|363547893|gb|AEW26986.1| phytochrome P [Ginkgo biloba]
Length = 590
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/602 (73%), Positives = 496/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC + V++ TFR+IAYSENA EML L P SVP++E +E+L IGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLTVEDITFRIIAYSENAVEMLDLIPNSVPSME-EEVLAIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+H K++GKPFYAI+HR+DVG+VID EP D +LS AGAVQ
Sbjct: 61 SLEKAAAAKEISLMNPIWMHCKHSGKPFYAIVHRIDVGMVIDFEP--VGDASLSAAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQS+PGGDI LLCDTVVE VR LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSIPGGDISLLCDTVVEDVRDLTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQDE L QPLCLVGSTLR
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCCATPVKVIQDEELRQPLCLVGSTLRX 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL +AVIING T +LW
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVIING----------TMKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGL LNMELQL +QL EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLXLNMELQLGAQLXEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G ++ LGVTPTE QIKDI +WLL YH DSTGLSTDSLADAGYP A +LGDAV
Sbjct: 349 DGAALYYGGMFWLLGVTPTEAQIKDIADWLLEYHADSTGLSTDSLADAGYPGAPSLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+LQG+DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAKVAELTGL V EAMGKSLVHDLV++E E V+ LL+HAL
Sbjct: 529 ETATAPILAVDSGGLVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESVETVEKLLYHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547519|gb|AEW26803.1| phytochrome P [Cycas chamaoensis]
Length = 589
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/592 (74%), Positives = 500/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIINGN + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINGNVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547544|gb|AEW26815.1| phytochrome P [Cycas ferruginea]
Length = 589
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 499/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DCHATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCHATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSKTKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547615|gb|AEW26850.1| phytochrome P [Cycas tansachana]
Length = 589
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDL Y+E E V+ LL+HALKG
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLAYEESVETVERLLYHALKG 589
>gi|406685517|gb|AFS51199.1| phytochrome P, partial [Halocarpus bidwillii]
Length = 584
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/584 (75%), Positives = 489/584 (83%), Gaps = 30/584 (5%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLE--KQEILTIG 142
AYLS++QRGG IQPFGC +AV+E TF++IAYS+NA EML + QSVPN++ K LTIG
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFKIIAYSQNALEMLDIMSQSVPNMDLGKPGTLTIG 60
Query: 143 TDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR 202
TDVRTLFT +S+ LEKA A+EI+L+NPIW+HS+ +GKPFYAI+HR+DVG+VIDLEP R
Sbjct: 61 TDVRTLFTPASARALEKASMAQEISLMNPIWVHSQYSGKPFYAIVHRIDVGMVIDLEPVR 120
Query: 203 TEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHE 262
T D A+S AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VRQLTGYDRVMVY+FHE
Sbjct: 121 TGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRQLTGYDRVMVYKFHE 180
Query: 263 DEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGL 322
DEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQSEEL 240
Query: 323 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--RLW---- 376
QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G + +LW
Sbjct: 241 RQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGKSGGSSMKLWGLVV 300
Query: 377 ----------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPA 414
AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P
Sbjct: 301 CHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPI 360
Query: 415 GIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSL 474
GIVTQSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL YHGDSTGLSTDSL
Sbjct: 361 GIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSL 420
Query: 475 ADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 534
ADAGYP A +LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHP
Sbjct: 421 ADAGYPGATSLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHP 480
Query: 535 RSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQG 594
RSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K +V+A+L DL+LQG
Sbjct: 481 RSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQG 540
Query: 595 VDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGL 638
+DELS VA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL
Sbjct: 541 IDELSCVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGL 584
>gi|363547697|gb|AEW26891.1| phytochrome P [Encephalartos friderici-guilielmi]
Length = 589
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/602 (73%), Positives = 496/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 1 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 59
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 60 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 117
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 118 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 177
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 178 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 237
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHASPRAVPFPLRY 287
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 288 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 347
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 348 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAV 407
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 408 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRS 467
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 468 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 527
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 528 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 587
Query: 670 KG 671
+G
Sbjct: 588 RG 589
>gi|363547554|gb|AEW26820.1| phytochrome P [Cycas lindstromii]
Length = 589
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +G DVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGKDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIIHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547581|gb|AEW26833.1| phytochrome P [Cycas pectinata]
Length = 589
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEIGLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547689|gb|AEW26887.1| phytochrome P [Encephalartos dolomiticus]
Length = 590
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/602 (73%), Positives = 495/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDIVEWLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIVEWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547603|gb|AEW26844.1| phytochrome P [Cycas siamensis]
Length = 589
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/592 (74%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDG ALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGTALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547717|gb|AEW26901.1| phytochrome P [Encephalartos lanatus]
Length = 590
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/602 (73%), Positives = 496/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGD+ LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDVGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547552|gb|AEW26819.1| phytochrome P [Cycas hongheensis]
gi|363547611|gb|AEW26848.1| phytochrome P [Cycas taitungensis]
Length = 589
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/592 (74%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547740|gb|AEW26912.1| phytochrome P [Encephalartos nubimontanus]
Length = 590
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/602 (73%), Positives = 494/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI EWLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIAEWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547786|gb|AEW26934.1| phytochrome P [Macrozamia fraseri]
Length = 590
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 498/592 (84%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+L+GYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELSGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESTETVERLLCHALRG 590
>gi|363547573|gb|AEW26829.1| phytochrome P [Cycas nongnoochiae]
Length = 589
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNG NAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HALKG
Sbjct: 538 DSGGLVNGRNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALKG 589
>gi|363547587|gb|AEW26836.1| phytochrome P [Cycas revoluta]
Length = 589
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQ+NMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQVNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547655|gb|AEW26870.1| phytochrome P [Zamia restrepoi]
gi|363547862|gb|AEW26971.1| phytochrome P [Zamia manicata]
gi|363547864|gb|AEW26972.1| phytochrome P [Zamia muricata]
Length = 590
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 498/592 (84%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547808|gb|AEW26944.1| phytochrome P [Macrozamia plurinervia]
Length = 590
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 498/592 (84%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L +PLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547730|gb|AEW26907.1| phytochrome P [Encephalartos middelburgensis]
Length = 590
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/602 (73%), Positives = 493/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E QE LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCVLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-QEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A P+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAMPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547778|gb|AEW26930.1| phytochrome P [Macrozamia douglasii]
gi|363547793|gb|AEW26937.1| phytochrome P [Macrozamia lucida]
gi|363547800|gb|AEW26940.1| phytochrome P [Macrozamia moorei]
Length = 590
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 497/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547685|gb|AEW26885.1| phytochrome P [Encephalartos cupidus]
Length = 590
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/602 (73%), Positives = 494/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSF+AFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFEAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547527|gb|AEW26807.1| phytochrome P [Cycas clivicola]
Length = 589
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/592 (74%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLH PATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHCPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547601|gb|AEW26843.1| phytochrome P [Cycas sexseminifera]
gi|363547613|gb|AEW26849.1| phytochrome P [Cycas tanqingii]
Length = 589
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547822|gb|AEW26951.1| phytochrome P [Microcycas calocoma]
Length = 590
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT SS +
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPSSGL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+LLNPIW+HSK++GKPFY I+HR+DVG+VID+EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLLNPIWMHSKSSGKPFYVIVHRIDVGMVIDIEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ++PGGDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQAVPGGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVSVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+IN N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINANMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLASQL+EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLASQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE+QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPTESQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSH AKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHAAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SFRD + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFRDIDDSETKTMIHSRLNDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EA GKSLV DLVY+E E V+ LL AL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLRLALRG 590
>gi|363547707|gb|AEW26896.1| phytochrome P [Encephalartos humilis]
Length = 590
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/602 (73%), Positives = 494/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEV AE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVAAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLS DSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSMDSLADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547562|gb|AEW26824.1| phytochrome P [Cycas media subsp. media]
Length = 589
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547744|gb|AEW26914.1| phytochrome P [Encephalartos princeps]
Length = 590
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/602 (73%), Positives = 494/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LT+GTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTVGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQ NME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQPNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+NAEMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENAEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547541|gb|AEW26814.1| phytochrome P [Cycas edentata]
gi|363547567|gb|AEW26826.1| phytochrome P [Cycas micronesica]
gi|363547625|gb|AEW26855.1| phytochrome P [Cycas zeylanica]
Length = 589
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|406685479|gb|AFS51180.1| phytochrome P, partial [Araucaria rulei]
Length = 617
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/600 (73%), Positives = 495/600 (82%), Gaps = 39/600 (6%)
Query: 138 ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVID 197
++TIGTDVRTLFT+SS+ LEKA A EI+L+NPIW+HSKNT KPFYAI+HR+DVG+V+D
Sbjct: 18 VMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVGMVMD 77
Query: 198 LEPARTE-----DPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGY 252
LEP RT D ALS AGAVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGY
Sbjct: 78 LEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGY 137
Query: 253 DRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 312
DRVMVY+FHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A
Sbjct: 138 DRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAA 197
Query: 313 PLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST 372
P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGN++E GG +
Sbjct: 198 PVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGGGGS 257
Query: 373 T--------RLW--------------------------AFGLQLNMELQLASQLSEKHVL 398
+LW AFGLQLNMELQLA+QL+EKH+L
Sbjct: 258 GSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHIL 317
Query: 399 RTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEW 458
RTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +W
Sbjct: 318 RTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADW 377
Query: 459 LLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGG 518
LL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGG
Sbjct: 378 LLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGG 437
Query: 519 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN 578
AKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN
Sbjct: 438 AKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN 497
Query: 579 SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGL 638
+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AVD +G +NGWNAKVAELTGL
Sbjct: 498 TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGL 557
Query: 639 SVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
V EAMGKSLVHDL+++E VD +L+ AL+GEE+KNVEIKLRTFG + +KKA+++VVN
Sbjct: 558 PVGEAMGKSLVHDLIFEESANTVDKMLYQALRGEEEKNVEIKLRTFGPQKQKKAIYLVVN 617
>gi|363547548|gb|AEW26817.1| phytochrome P [Cycas guizhouensis]
Length = 589
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGND---EEAVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWDLVVCHHTSVRAIPFPVRYVCEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGMDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547579|gb|AEW26832.1| phytochrome P [Cycas pectinata]
Length = 589
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVR IS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRTISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAK +KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKGVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547868|gb|AEW26974.1| phytochrome P [Zamia obliqua]
Length = 590
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 498/592 (84%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS++SL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVSSLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547560|gb|AEW26823.1| phytochrome P [Cycas macrocarpa]
Length = 589
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+F EDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFREDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547709|gb|AEW26897.1| phytochrome P [Encephalartos inopinus]
Length = 590
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/602 (73%), Positives = 495/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DCHATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCHATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVVAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL H D TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHSDWTGLSTDSLADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547776|gb|AEW26929.1| phytochrome P [Macrozamia diplomera]
gi|363547788|gb|AEW26935.1| phytochrome P [Macrozamia glaucophylla]
gi|363547804|gb|AEW26942.1| phytochrome P [Macrozamia pauli-guilielmi]
gi|363547806|gb|AEW26943.1| phytochrome P [Macrozamia platyrhachis]
Length = 590
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/592 (74%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+ +NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISFMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547621|gb|AEW26853.1| phytochrome P [Cycas xipholepis]
Length = 589
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547754|gb|AEW26919.1| phytochrome P [Encephalartos senticosus]
Length = 590
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/602 (73%), Positives = 493/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+ K +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTGKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547609|gb|AEW26847.1| phytochrome P [Cycas szechuanensis]
Length = 589
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HA +G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHASRG 589
>gi|363547539|gb|AEW26813.1| phytochrome P [Cycas dolichophylla]
Length = 589
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+E++L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEMSLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547713|gb|AEW26899.1| phytochrome P [Encephalartos kisambo]
Length = 590
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/602 (73%), Positives = 494/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 PLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRVVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547798|gb|AEW26939.1| phytochrome P [Macrozamia montana]
Length = 590
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVGERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547623|gb|AEW26854.1| phytochrome P [Cycas yorkiana]
Length = 589
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547569|gb|AEW26827.1| phytochrome P [Cycas revoluta]
Length = 589
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 498/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPR+SFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRTSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547784|gb|AEW26933.1| phytochrome P [Macrozamia flexuosa]
Length = 590
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 498/592 (84%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVV+ VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVKDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L +PLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQL+LR SF+D + S +K +++++L DL++Q +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLVLRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547711|gb|AEW26898.1| phytochrome P [Encephalartos ituriensis]
Length = 590
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/602 (73%), Positives = 494/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+E+ +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTERRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547886|gb|AEW26983.1| phytochrome P [Zamia skinneri]
Length = 590
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 498/592 (84%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EK++L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKNILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547773|gb|AEW26928.1| phytochrome P [Lepidozamia peroffskyana]
Length = 590
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E QE LTIGTD+RTLFT SS++
Sbjct: 2 IQPFGCMLAVEECTFRIIAYSENAVGMLDLAPQSVPTME-QEFLTIGTDIRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYA++HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAVVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPVGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYP+TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPSTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYM NMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMVNMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EK +LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QI+DI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIEDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547583|gb|AEW26834.1| phytochrome P [Cycas petraea]
Length = 589
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVR LFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRALFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWGNVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547687|gb|AEW26886.1| phytochrome P [Encephalartos cycadifolius]
Length = 590
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/602 (73%), Positives = 494/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGG I LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGVIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+NAEMDAIHSLQLILR SF+D S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENAEMDAIHSLQLILRGSFQDIHDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547550|gb|AEW26818.1| phytochrome P [Cycas hainanensis]
Length = 589
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/592 (74%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC IAV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMIAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPI + S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPILMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547593|gb|AEW26839.1| phytochrome P [Cycas schumanniana]
Length = 589
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF+ IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKTIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547619|gb|AEW26852.1| phytochrome P [Cycas tropophylla]
Length = 589
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA AREI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAREISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDM LRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMFLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSL DAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLVDAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGLSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547595|gb|AEW26840.1| phytochrome P [Cycas seemannii]
Length = 589
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ +IQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKIIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG S VHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSFVHDLVYEESVETVERLLYHALRG 589
>gi|363547517|gb|AEW26802.1| phytochrome P [Cycas calcicola]
Length = 589
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTLIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKMAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|327241180|gb|AEA40434.1| phytochrome A type 2 [Triticum aestivum]
Length = 889
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/867 (52%), Positives = 585/867 (67%), Gaps = 49/867 (5%)
Query: 37 TVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVR------TMSHSVPEQQISAYLSKI 90
T + +AQ T+DA+L+A FE ES SFDYS+ V T+ +++ AYL I
Sbjct: 18 TQERVLAQTTLDAQLNAEFE---ESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 91 QRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFT 150
QRG IQ FGC +A+DE +F VIA+SENA EML +VP++ L IGT+VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVNDPPRLDIGTNVRSLFT 134
Query: 151 SSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALS 209
+ L KA G +++LLNPI + K +GKPFYAI+HR + +D EP TE PA S
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLAVDFEPVNPTEFPA-S 193
Query: 210 IAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVV 269
AGA+QS KLA +AIS++Q+LPGG I+LLC+TVV+ V +LTGYDRVM Y+FHED HGEV
Sbjct: 194 AAGALQSYKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVF 253
Query: 270 AESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLV 329
AE +P LEPY GLHYPATDIPQA+RFLF +N+VRMI D + + VI+DE L + L
Sbjct: 254 AEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKVIEDEALPFDISLC 313
Query: 330 GSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-EAVGGRSTTR------LWA----- 377
GS LRA H CH QYM NM SIASL +AV++N N+E + VG + LW
Sbjct: 314 GSALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCH 373
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAG 415
F + +N E ++ QL EK +LRTQT+L DML ++ SP
Sbjct: 374 HESPRYAPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTILSDMLFKEASPLT 433
Query: 416 IVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLA 475
IV+ +P+IMDL+KCDGAAL Y K + LG PTE+QI+D+ WL H DSTGLST+SL
Sbjct: 434 IVSGAPNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLH 493
Query: 476 DAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 535
DAGYP A+ LGD+VCGMAVA I D LFWFRSHTA+EI+WGGAK+ P D+DD +RMHPR
Sbjct: 494 DAGYPGASALGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKNDPSDQDDSRRMHPR 553
Query: 536 SSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGV 595
SFKAFLEVVK +SL W ++EMDAIHSLQLILR + KA ++ Q+ DL+L G+
Sbjct: 554 LSFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV +
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+V +L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV
Sbjct: 673 SSVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFV 732
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QDVT KLVMDKF ++GDY AI+H+PNPLIPPIF +DE C EWN AM KLTGW R
Sbjct: 733 AQDVTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHRE 792
Query: 776 DIIGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
+++ KML+GEVF S C LK DA + +++A G++TEK PF FDR+GKY
Sbjct: 793 EVLNKMLLGEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDC 852
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPE 859
LL+ N+R N G I G FCF+ I S E
Sbjct: 853 LLSVNRRENEGGLITGVFCFIHIPSHE 879
>gi|363547769|gb|AEW26926.1| phytochrome P [Encephalartos woodii]
Length = 590
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/602 (73%), Positives = 493/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIGDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547816|gb|AEW26948.1| phytochrome P [Macrozamia serpentina]
Length = 590
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/592 (74%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V + R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTCPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIAGWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547889|gb|AEW26984.1| phytochrome P [Zamia standleyi]
Length = 590
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDKGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 SSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547556|gb|AEW26821.1| phytochrome P [Cycas litoralis]
Length = 589
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQL+MELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLSMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547503|gb|AEW26795.1| phytochrome P [Cycas apoa]
Length = 589
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSE+A EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSEDAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547505|gb|AEW26796.1| phytochrome P [Cycas armstrongii]
Length = 589
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTL T SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLLTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547866|gb|AEW26973.1| phytochrome P [Zamia neurophyllidia]
Length = 590
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGA Q
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAAQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP A+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGTASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547575|gb|AEW26830.1| phytochrome P [Cycas ophiolitica]
Length = 589
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLAD GYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADTGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547537|gb|AEW26812.1| phytochrome P [Cycas diannanensis]
Length = 589
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+V+D EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVVDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GL YPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLRYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKQRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547802|gb|AEW26941.1| phytochrome P [Macrozamia mountperriensis]
Length = 590
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/592 (74%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSEN ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENPVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEGVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVGVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V + R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTCPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547820|gb|AEW26950.1| phytochrome P [Macrozamia stenomera]
Length = 590
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/592 (74%), Positives = 497/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L +PLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGY AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYSGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMEAVERLLCHALRG 590
>gi|363547607|gb|AEW26846.1| phytochrome P [Cycas sphaerica]
Length = 589
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSL DAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLGDAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547858|gb|AEW26969.1| phytochrome P [Zamia lecointei]
Length = 590
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/592 (73%), Positives = 497/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEEHTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HS+++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSESSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +A ++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAAVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547671|gb|AEW26878.1| phytochrome P [Encephalartos aplanatus]
Length = 589
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/602 (73%), Positives = 493/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 1 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 59
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 60 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 117
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 118 SQRLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 177
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 178 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 237
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 287
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 288 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 347
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 348 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAV 407
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 408 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 467
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K ++++L DL +Q +DELSSVA EMVRLI
Sbjct: 468 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTTIHSRLNDLRVQSMDELSSVAGEMVRLI 527
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 528 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 587
Query: 670 KG 671
+G
Sbjct: 588 RG 589
>gi|363547546|gb|AEW26816.1| phytochrome P [Cycas fugax]
Length = 589
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A P+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAV IN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVSINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 LWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547585|gb|AEW26835.1| phytochrome P [Cycas platyphylla]
Length = 589
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHYQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGWRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547523|gb|AEW26805.1| phytochrome P [Cycas chevalieri]
Length = 589
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQRLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGV PTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVAPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547796|gb|AEW26938.1| phytochrome P [Macrozamia miquelii]
Length = 590
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/592 (74%), Positives = 494/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V + R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTCPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFW RSHTAKEIKWGGAKHHP DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWLRSHTAKEIKWGGAKHHPNDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547571|gb|AEW26828.1| phytochrome P [Cycas multipinnata]
Length = 589
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGPLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547513|gb|AEW26800.1| phytochrome P [Cycas brachycantha]
Length = 589
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 497/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+V D EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVTDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQELAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547529|gb|AEW26808.1| phytochrome P [Cycas collina]
Length = 589
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+ +GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRCSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP A +LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGATSLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547679|gb|AEW26882.1| phytochrome P [Encephalartos caffer]
Length = 590
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/602 (73%), Positives = 492/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIGRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL AV+INGN T+LW
Sbjct: 239 PHGCHAQYMANMGSIASLVTAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL ++ +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVRSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547826|gb|AEW26953.1| phytochrome P [Zamia acuminata]
Length = 590
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/592 (73%), Positives = 497/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQL +QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + + +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547599|gb|AEW26842.1| phytochrome P [Cycas semota]
Length = 589
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHYQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDL KCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLAKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547511|gb|AEW26799.1| phytochrome P [Cycas bougainvilleana]
Length = 589
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVGIVID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGIVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIGRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAK +KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKGVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547715|gb|AEW26900.1| phytochrome P [Encephalartos laevifolius]
Length = 590
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/602 (72%), Positives = 493/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEV AE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVAAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQS SIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSLSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLS DSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSMDSLADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547507|gb|AEW26797.1| phytochrome P [Cycas basaltica]
Length = 589
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIE ATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMMHARLNDLRVQGIDELSSVASEMVRLIEAATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547759|gb|AEW26921.1| phytochrome P [Encephalartos transvenosus]
Length = 590
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/602 (73%), Positives = 492/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +A +E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAAEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAAASVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRTLKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547852|gb|AEW26966.1| phytochrome P [Zamia kickxii]
Length = 590
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/592 (73%), Positives = 497/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGVAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQL +QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + + +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547691|gb|AEW26888.1| phytochrome P [Encephalartos dyerianus]
Length = 590
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/602 (72%), Positives = 494/602 (82%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGG I LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGVIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGA+H P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAEHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547565|gb|AEW26825.1| phytochrome P [Cycas micholitzii]
Length = 589
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+ R+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVPRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDE---EAVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGY AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYTGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIET TAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETVTAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547734|gb|AEW26909.1| phytochrome P [Encephalartos munchii]
Length = 590
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/602 (72%), Positives = 493/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
+QPFGC +AV+E T+R+I+YSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 VQPFGCMLAVEERTYRIISYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRS TAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547627|gb|AEW26856.1| phytochrome P [Bowenia serrulata]
Length = 590
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/602 (72%), Positives = 490/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR++AYSENA ML LAPQSVP +E+ E+L IGTDVRTLFT+SS++
Sbjct: 2 IQPFGCVLAVEERTFRIVAYSENAVGMLDLAPQSVPTMER-ELLAIGTDVRTLFTASSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI L+NP+W+HS+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEIGLMNPVWMHSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPVRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQ+NMELQLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPS MDLVKC
Sbjct: 289 ACEFLMQAFGLQVNMELQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSTMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY GK + LGV P E QIKDI WLL H D TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGKAWVLGVAPAEAQIKDIAAWLLECHADWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKE KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKETKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+NAEMDAIHSLQLILR F D S +K +++++L DL LQ +DELSSVA EMVRLI
Sbjct: 469 LPWENAEMDAIHSLQLILRGPFEDINDSETKTIIHSRLNDLRLQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LL HAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLRHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547617|gb|AEW26851.1| phytochrome P [Cycas thouarsii]
Length = 589
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L P SVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPLSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFY I+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYVIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547903|gb|AEW26991.1| phytochrome P [Pseudotsuga menziesii]
Length = 590
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 499/592 (84%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYS NA EML LAPQSVP++E E+LTIGTDVRTLFT++S+
Sbjct: 2 IQPFGCVLAVEETTFRIIAYSGNAVEMLDLAPQSVPSMEP-EVLTIGTDVRTLFTAASAN 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+H KN+ KPFYA++HR+DVG+VID EP D +S AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWVHCKNSRKPFYAVVHRIDVGMVIDFEP--LGDAFMSAAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHEDE GEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHEDERGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ +IQ E LMQPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKLIQSEELMQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AVIINGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVIINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL +HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 CWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASAIITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS PWDN E+DA
Sbjct: 419 KDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWDNVEIDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +V+++L DL LQG+DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D +G VNGWNAKVAELTGL V EAM SLV DLV++E + V+ +L++ALKG
Sbjct: 539 DSNGLVNGWNAKVAELTGLPVGEAMSMSLVQDLVFEESVQRVEKMLNNALKG 590
>gi|363547663|gb|AEW26874.1| phytochrome P [Dioon spinulosum]
Length = 590
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E QE LTIGTDVRTLFT +S++
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTME-QEFLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+H K++GK FYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V+Q L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANM SIASL +AV++NGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMRSIASLVMAVVVNGNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL H D TGLSTDSLA+AGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDAVCGMAAAKITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSS+A EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGMDELSSIASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHALRG 590
>gi|363547525|gb|AEW26806.1| phytochrome P [Cycas circinalis]
Length = 589
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGRLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547597|gb|AEW26841.1| phytochrome P [Cycas segmentifida]
Length = 589
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +A +E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAAEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+E++L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEMSLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRTIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWG AKHHP+DK DG+RMHPRSSFKAFLEVVK RSL W+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGEAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLSWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LLHHAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLHHALRG 589
>gi|363547533|gb|AEW26810.1| phytochrome P [Cycas couttsiana]
Length = 589
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHYQYMANMGSIASLILAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGW+AKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWDAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547752|gb|AEW26918.1| phytochrome P [Encephalartos sclavoi]
Length = 590
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/602 (72%), Positives = 493/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRVVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPS+MDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSVMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAAL Y G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALCYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547810|gb|AEW26945.1| phytochrome P [Macrozamia polymorpha]
Length = 590
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+ +NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISFMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDI QASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDISQASRFLFMQNRVRMICDCRATPVRVIQATELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGV+P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVSPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547812|gb|AEW26946.1| phytochrome P [Macrozamia reducta]
Length = 590
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKP YAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPSYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+E+H+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTERHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSF+AFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFRAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547860|gb|AEW26970.1| phytochrome P [Zamia loddigesii]
Length = 590
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/592 (73%), Positives = 497/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+ SK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ++PGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQAMPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYP TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S++K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSDTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
+ G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 NSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547746|gb|AEW26915.1| phytochrome P [Encephalartos pterogonus]
Length = 590
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/602 (72%), Positives = 492/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+Q A+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQSAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRS TAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLRVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547842|gb|AEW26961.1| phytochrome P [Zamia furfuracea]
Length = 590
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+ SK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYP TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPIRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
+ G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 NSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547591|gb|AEW26838.1| phytochrome P [Cycas rumphii]
Length = 589
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LP GDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPRGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIP+ASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547515|gb|AEW26801.1| phytochrome P [Cycas cairnsiana]
Length = 589
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWTRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHED+HGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDKHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHYQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKD+ +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDMADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547870|gb|AEW26975.1| phytochrome P [Zamia paucijuga]
Length = 590
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYP TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
+ G VNGWNAK+AELTGL V EAMGK LV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 NSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHALRG 590
>gi|363547850|gb|AEW26965.1| phytochrome P [Zamia katzeriana]
Length = 590
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+ SK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYP TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
+ G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 NSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547880|gb|AEW26980.1| phytochrome P [Zamia pumila]
Length = 590
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 497/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT ++++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPANAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGVAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQL +QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + + +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547665|gb|AEW26875.1| phytochrome P [Dioon tomasellii]
Length = 590
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 497/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT +S++
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+H K++GK FYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V+Q L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV++NGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVNGNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNM+LQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMDLQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL H D TGLSTDSLA+AGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDAVCGMAAAKITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + + +K +++A+L DL +QG+DELSS+A EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDTETKTMIHARLNDLRVQGMDELSSIASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHALRG 590
>gi|363547780|gb|AEW26931.1| phytochrome P [Macrozamia dyeri]
Length = 590
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 494/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+ +NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISFMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAV AIS+LQSLPGGDI LLCDT VE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVGAISRLQSLPGGDIGLLCDTAVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547657|gb|AEW26871.1| phytochrome P [Dioon edule]
Length = 590
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT +S++
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+H K++GK FYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V+Q L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIA+L +AV++NGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIATLVMAVVVNGNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI WLL H D TGLSTDSLA+AGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWALGVTPPEAQIKDIAAWLLECHADWTGLSTDSLAEAGYPGAASLGDAVCGMAAAKITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + + +K +++A+L DL +QG+DELSS+A EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDTETKTMIHARLNDLRVQGMDELSSIASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHALRG 590
>gi|363547878|gb|AEW26979.1| phytochrome P [Zamia pseudomonticola]
Length = 590
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LG+TPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTA EIKWGGAKHH +DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTANEIKWGGAKHHTDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547577|gb|AEW26831.1| phytochrome P [Cycas panzhihuaensis]
Length = 589
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 496/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TF++IAYSENA EML L PQSVP +E+ E+L +GTDVRTLFT SS+
Sbjct: 2 IQPLGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMER-EVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
L KA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 PLGKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGG I LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGGIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAAL Y G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALCYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547836|gb|AEW26958.1| phytochrome P [Zamia elegantissima]
Length = 590
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPIRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL H D TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHSDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+ ++MHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDESRKMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMG+SLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGRSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547790|gb|AEW26936.1| phytochrome P [Macrozamia johnsonii]
Length = 590
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 494/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTL T SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLLTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAV AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVGAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V + R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTCPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547509|gb|AEW26798.1| phytochrome P [Cycas beddomei]
Length = 589
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/592 (73%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
QPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 FQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HRVDVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRVDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC AT + VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATLVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547848|gb|AEW26964.1| phytochrome P [Zamia ipetiensis]
Length = 590
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC AT + VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATTVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GI TQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIATQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QI DI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQITDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547605|gb|AEW26845.1| phytochrome P [Cycas simplicipinna]
Length = 589
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/592 (73%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--ADAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAI +LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAIPRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP A +LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGATSLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ L +HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLPYHALRG 589
>gi|363547738|gb|AEW26911.1| phytochrome P [Encephalartos ngoyanus]
Length = 590
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMA+MGSIASL +AV+IN N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINVNPKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVAGEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547832|gb|AEW26956.1| phytochrome P [Zamia chigua]
Length = 590
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+ +NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISFMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP A+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGVASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSL W+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLLWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547521|gb|AEW26804.1| phytochrome P [Cycas chamberlainii]
gi|363547589|gb|AEW26837.1| phytochrome P [Cycas riuminiana]
Length = 589
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLE Y GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLERYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EK +LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547872|gb|AEW26976.1| phytochrome P [Zamia picta]
Length = 590
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+ SK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYP TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
+ G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 NSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547882|gb|AEW26981.1| phytochrome P [Zamia purpurea]
Length = 590
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/592 (73%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLNLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+ SK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH QYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHGQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGK LV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHALRG 590
>gi|363547558|gb|AEW26822.1| phytochrome P [Cycas maconochiei]
Length = 589
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 495/592 (83%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQK AVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKPAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASR LF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRSLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
HGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFK FLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKVFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HAL+G
Sbjct: 538 DSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547830|gb|AEW26955.1| phytochrome P [Zamia angustifolia]
Length = 590
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGVAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQL +QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVT TE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTLTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + + +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547844|gb|AEW26962.1| phytochrome P [Zamia hymenophyllidia]
Length = 590
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/592 (73%), Positives = 496/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA +L LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGILDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+ +AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMPVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL +Q + ELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRVQSMGELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547854|gb|AEW26967.1| phytochrome P [Zamia lacandona]
Length = 590
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/592 (73%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+ SK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH QYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHGQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGK LV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHALRG 590
>gi|363547856|gb|AEW26968.1| phytochrome P [Zamia lawsoniana]
Length = 590
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/592 (73%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+ SK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYP TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNME QLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMESQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
+ G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 NSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547782|gb|AEW26932.1| phytochrome P [Macrozamia elegans]
Length = 590
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/592 (74%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANM SIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMCSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+ GDAVCGMA A IT
Sbjct: 359 VWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASPGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWF SHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFGSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL++Q +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|406685537|gb|AFS51209.1| phytochrome P, partial [Parasitaxus usta]
Length = 587
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/589 (74%), Positives = 488/589 (82%), Gaps = 37/589 (6%)
Query: 138 ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVID 197
+L IGTDVR LF+ +S+ LEKA ARE +NPIW+HS+ TGKPFYAI+HR+DVG+VID
Sbjct: 8 VLAIGTDVRRLFSPASARALEKAGMARE---MNPIWVHSQFTGKPFYAIVHRIDVGMVID 64
Query: 198 LEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMV 257
LEP RT AVQSQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMV
Sbjct: 65 LEPVRTG------MSAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMV 118
Query: 258 YRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVI 317
Y+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VI
Sbjct: 119 YKFHEDEHGEVVAEIRRVDLEPYQGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVI 178
Query: 318 QDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRL 375
Q + L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AV+INGNDEE G GRS+ +L
Sbjct: 179 QSQELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 238
Query: 376 W--------------------------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 409
W AFGLQLNMELQLA+QL+EKH+LRTQTLLCDMLL
Sbjct: 239 WGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 298
Query: 410 RDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGL 469
RD+P GIV+QSPSIMDLVKCDGAALYY G + LGVTPTE QIKDI +WLL YHGDSTGL
Sbjct: 299 RDAPIGIVSQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEGQIKDIADWLLEYHGDSTGL 358
Query: 470 STDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 529
STDSLADAGYP A+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG
Sbjct: 359 STDSLADAGYPGVASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 418
Query: 530 QRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVD 589
+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + SN+K +V+A+L D
Sbjct: 419 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLND 478
Query: 590 LELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLV 649
L+LQG DELSSVA EMVRLIETATAPI AVD +G VNGWNAKVAELTGL V EAMGKSLV
Sbjct: 479 LKLQGFDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 538
Query: 650 HDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
HDLV++E E VD +L+ AL+GEE+KNVEIKLRTFG E + +A+F+VVN
Sbjct: 539 HDLVFEESAESVDKMLYRALRGEEEKNVEIKLRTFGPEKQTEAIFLVVN 587
>gi|363547891|gb|AEW26985.1| phytochrome P [Zamia variegata]
Length = 590
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/592 (73%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+ SK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYP TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
+ G VNGWNAK+AEL GL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 NSGGFVNGWNAKLAELAGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547876|gb|AEW26978.1| phytochrome P [Zamia portoricensis]
Length = 590
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/591 (73%), Positives = 494/591 (83%), Gaps = 19/591 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK +GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKGSGKPFYAILHRIDVGMVIDFEP--VGGVAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQL +QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDA CGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAACGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + + +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALR 589
>gi|363547838|gb|AEW26959.1| phytochrome P [Zamia fairchildiana]
Length = 590
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/592 (73%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LG+TPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTA EIKWGGAKHH +DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTANEIKWGGAKHHTDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV D +Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDPIYEESMETVERLLHHALRG 590
>gi|283131697|dbj|BAI63255.1| phytochrome E [Pieris nana]
Length = 657
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/650 (66%), Positives = 513/650 (78%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFILLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEP R+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGM A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547874|gb|AEW26977.1| phytochrome P [Zamia poeppigiana]
Length = 590
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L Q LCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQLLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLL D+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLLDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADA YP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADARYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547531|gb|AEW26809.1| phytochrome P [Cycas condaoensis]
Length = 589
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/592 (74%), Positives = 499/592 (84%), Gaps = 20/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCH+QYMANMGSIASL LAVIIN N + V ++ R + AFG
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIINANVKLWGLVVCHHTSARAIPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 FWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 477
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AV
Sbjct: 478 IHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAV 537
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAKVAELTGL VEEAMG SLVHDLVY+E E V+ LL+HALKG
Sbjct: 538 DSGGIVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALKG 589
>gi|363547899|gb|AEW26989.1| phytochrome P [Abies firma]
Length = 590
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/592 (73%), Positives = 497/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
+QPFGC +AV+E TFR+IAYSENA EML LAPQSVP++E QE+LTIGTDVRTLFT++S+
Sbjct: 2 VQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSME-QEVLTIGTDVRTLFTAASAN 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A EI+L+NPIW+H KN+ KPFYAI+HR+DVG+VID EP D +S AGAVQ
Sbjct: 61 SLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEP--LGDAFMSAAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLP GDI LLCDTVVE+VR+LTGYDRVMVY+FHEDEHG +R
Sbjct: 119 SQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHEDEHGGSCRGIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
+LEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E LMQPLCLVGSTLRA
Sbjct: 179 NLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYM NMGSIASL +AVIINGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMGNMGSIASLVMAVIINGNLKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAAL+Y G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALHYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL +HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 CWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPSAASLGDAVCGMASARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPWDN E+DA
Sbjct: 419 KDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWDNVEIDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +V+++L DL LQG+DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D +G VNGWNAKVAELTGL V EAMG SLV DL+++E E V+ +L++AL+G
Sbjct: 539 DSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLLFEESVERVEKMLYNALRG 590
>gi|363547828|gb|AEW26954.1| phytochrome P [Zamia amblyphyllidia]
Length = 590
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/592 (72%), Positives = 493/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGD LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDTGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVG+TLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGATLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LG+TPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTA EIKWGGAKHH +DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTANEIKWGGAKHHADDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDINDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EAMGKS V DL+Y+E E V+ LLHHAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEAMGKSFVCDLIYEESMETVERLLHHALRG 590
>gi|363547699|gb|AEW26892.1| phytochrome P [Encephalartos ghellinckii]
Length = 582
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/595 (73%), Positives = 491/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT+SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTASSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHASPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGIVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547723|gb|AEW26904.1| phytochrome P [Encephalartos lehmannii]
Length = 582
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/595 (73%), Positives = 489/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK+ GKPFYAI+HR+DVG+VID EP D A+S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSFGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMANMGSIASL +AV+INGN T+LW
Sbjct: 238 YMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+NAE
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENAE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547761|gb|AEW26922.1| phytochrome P [Encephalartos trispinosus]
Length = 582
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/595 (73%), Positives = 489/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMANMGSIASL +AV+INGN T+LW
Sbjct: 238 YMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+NAE
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENAE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547840|gb|AEW26960.1| phytochrome P [Zamia furfuracea]
Length = 590
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/592 (72%), Positives = 494/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP GC +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+ SK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYP TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGS+ASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNME QLA+QL+EKH+L+TQTLLC+MLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMESQLAAQLTEKHILKTQTLLCNMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDA CGMA A IT
Sbjct: 359 VWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAACGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
+ G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 539 NSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|283131689|dbj|BAI63251.1| phytochrome E [Pieris nana]
gi|283131707|dbj|BAI63260.1| phytochrome E [Pieris japonica]
Length = 657
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/650 (67%), Positives = 516/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG DVRTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDVRTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547834|gb|AEW26957.1| phytochrome P [Zamia dressleri]
Length = 590
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/602 (72%), Positives = 492/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQP G +AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++
Sbjct: 2 IQPLGYMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQ
Sbjct: 61 SLEKAGAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRM+ DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMVCDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGS+ASL +AV++N N +LW
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMNVN----------MKLWGLVVCHHTSPGAVPFPARY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTPTE QIKDI +WLL HGD TGLSTDS ADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSSADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
C MA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CRMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL LQ +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|283131679|dbj|BAI63246.1| phytochrome E [Pieris nana]
Length = 657
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/650 (67%), Positives = 516/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG DVRTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDVRTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNDNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547659|gb|AEW26872.1| phytochrome P [Dioon merolae]
Length = 590
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/592 (73%), Positives = 495/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV++ TFR+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT +S++
Sbjct: 2 IQPFGCMLAVEKGTFRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+H K++GK FYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEP GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V+Q L QPLCLVGSTLRA
Sbjct: 179 DLEPCLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV++NGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVNGNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL H D TGLSTDSLA+AGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDAVCGMAAAKITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + + +K +++A+L DL +QG+DELSS+A EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDTETKTMIHARLNDLRVQGMDELSSIASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EA GKSLV DLVY+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLCHALRG 590
>gi|363547681|gb|AEW26883.1| phytochrome P [Encephalartos cerinus]
Length = 582
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/595 (73%), Positives = 488/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMANMGSIASL +AV+INGN T+LW
Sbjct: 238 YMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITSKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|283131681|dbj|BAI63247.1| phytochrome E [Pieris nana]
gi|283131757|dbj|BAI63238.1| phytochrome E [Pieris nana]
Length = 657
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/650 (67%), Positives = 515/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547673|gb|AEW26879.1| phytochrome P [Encephalartos arenarius]
Length = 582
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/595 (73%), Positives = 488/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+ V+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LVVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMANMGSIASL +AV+INGN T+LW
Sbjct: 238 YMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+NAE
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENAE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547667|gb|AEW26876.1| phytochrome P [Encephalartos aemulans]
Length = 582
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/595 (73%), Positives = 488/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMANMGSIASL +AV+INGN T+LW
Sbjct: 238 YMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547693|gb|AEW26889.1| phytochrome P [Encephalartos eugene-maraisii]
Length = 582
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/595 (73%), Positives = 488/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI EWLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIAEWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|283131677|dbj|BAI63245.1| phytochrome E [Pieris nana]
gi|283131773|dbj|BAI63230.1| phytochrome E [Pieris nana]
Length = 657
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/650 (67%), Positives = 515/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSLSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131709|dbj|BAI63241.1| phytochrome E [Pieris nana]
Length = 657
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/650 (67%), Positives = 515/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSCGVVENLMCRAFN 657
>gi|363547763|gb|AEW26923.1| phytochrome P [Encephalartos turneri]
Length = 582
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/595 (73%), Positives = 488/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESTETVERLLHHALRG 582
>gi|363547535|gb|AEW26811.1| phytochrome P [Cycas debaoensis]
Length = 582
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/585 (74%), Positives = 492/585 (84%), Gaps = 20/585 (3%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+ LEKA
Sbjct: 2 LAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAASLEKAAV 60
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQSQKLAVR
Sbjct: 61 AQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQSQKLAVR 118
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY G
Sbjct: 119 AISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLG 178
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA HGCH+Q
Sbjct: 179 LHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRAAHGCHSQ 238
Query: 343 YMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFGLQLNMEL 386
YMANMGSIASL LAVIIN N + V ++ R + AFGLQLNMEL
Sbjct: 239 YMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFGLQLNMEL 298
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
QLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G ++ LGVT
Sbjct: 299 QLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVT 358
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
PTE QIKDI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWF
Sbjct: 359 PTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWF 418
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLI
Sbjct: 419 RSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLI 477
Query: 567 LRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
LR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AVD G VN
Sbjct: 478 LRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAVDSGGLVN 537
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
GWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 538 GWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 582
>gi|363547725|gb|AEW26905.1| phytochrome P [Encephalartos longifolius]
Length = 582
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/595 (73%), Positives = 487/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMANMGSIASL +AV+INGN T+LW
Sbjct: 238 YMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL YHGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLEYHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPR SFKAFLEVVK R LPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRPSFKAFLEVVKRRCLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547771|gb|AEW26927.1| phytochrome P [Lepidozamia hopei]
Length = 582
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/585 (74%), Positives = 489/585 (83%), Gaps = 19/585 (3%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E TFR+IAYSENA ML LAPQSVP E QE LTIGTD+RTLFT SS++ LEKA
Sbjct: 1 LAVEECTFRIIAYSENAVGMLDLAPQSVPTTE-QEFLTIGTDIRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HS+++GKPFYA++HR+DVG+VID EP D A+S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSRSSGKPFYAVVHRIDVGMVIDFEP--VGDAAMSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPVGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYP+TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPSTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFGLQLNMEL 386
YM NMGSIASL +AV+INGN + V ++ R + AFGLQLNMEL
Sbjct: 238 YMVNMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMEL 297
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
QLA+QL+EK +LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVT
Sbjct: 298 QLAAQLTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMVWVLGVT 357
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWF
Sbjct: 358 PAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFLFWF 417
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLI
Sbjct: 418 RSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLI 477
Query: 567 LRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
LR SF+D + S +K +++++L DL +Q VDELSSVA EMVRLIETATAPI AVD G VN
Sbjct: 478 LRGSFQDIDDSETKTMIHSRLNDLRVQSVDELSSVASEMVRLIETATAPILAVDSGGFVN 537
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
GWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 538 GWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|283131767|dbj|BAI63233.1| phytochrome E [Pieris nana]
Length = 657
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 514/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSLSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLMEKKVLRMQTLLCDMCLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DS GLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSKGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131701|dbj|BAI63257.1| phytochrome E [Pieris nana]
Length = 657
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 514/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEP R+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131699|dbj|BAI63256.1| phytochrome E [Pieris nana]
Length = 657
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 514/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGM A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131693|dbj|BAI63253.1| phytochrome E [Pieris nana]
Length = 657
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 513/650 (78%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEP R+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGM A IT R
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTARITSR 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131691|dbj|BAI63252.1| phytochrome E [Pieris nana]
Length = 657
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 514/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLEEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNDNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF FLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNTFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547705|gb|AEW26895.1| phytochrome P [Encephalartos horridus]
Length = 582
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/595 (73%), Positives = 487/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
AREI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID E D A S+AGAVQSQKLAVR
Sbjct: 60 AREISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFE--SVGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEGVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMANMGSIASL +AV+INGN T+LW
Sbjct: 238 YMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + L VTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALEVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+NAE
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENAE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|283131765|dbj|BAI63234.1| phytochrome E [Pieris nana]
gi|283131769|dbj|BAI63232.1| phytochrome E [Pieris nana]
gi|283131771|dbj|BAI63231.1| phytochrome E [Pieris nana]
Length = 657
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 514/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSLSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DS GLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSKGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547669|gb|AEW26877.1| phytochrome P [Encephalartos altensteinii]
gi|363547736|gb|AEW26910.1| phytochrome P [Encephalartos natalensis]
Length = 582
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/595 (73%), Positives = 488/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|283131685|dbj|BAI63249.1| phytochrome E [Pieris nana]
Length = 657
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/650 (66%), Positives = 513/650 (78%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEP R+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVGVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGM A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131683|dbj|BAI63248.1| phytochrome E [Pieris nana]
Length = 657
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/650 (67%), Positives = 515/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG DVRTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDVRTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDI QA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDILQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNDNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547721|gb|AEW26903.1| phytochrome P [Encephalartos lebomboensis]
Length = 582
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/595 (73%), Positives = 487/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMANMGSIASL +AV+INGN T+LW
Sbjct: 238 YMANMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV LVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCGLVYEESMETVERLLHHALRG 582
>gi|363547814|gb|AEW26947.1| phytochrome P [Macrozamia riedlei]
Length = 582
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/585 (74%), Positives = 490/585 (83%), Gaps = 19/585 (3%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFGLQLNMEL 386
YMANMGSIASL +AV+INGN + V + R + AFGLQLNMEL
Sbjct: 238 YMANMGSIASLVMAVVINGNMKLWGLVVCHHTCPRAVPFPLRYACEFLMQAFGLQLNMEL 297
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
QLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVT
Sbjct: 298 QLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMVWVLGVT 357
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWF
Sbjct: 358 PAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFLFWF 417
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLI
Sbjct: 418 RSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLI 477
Query: 567 LRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
LR SF+D + S +K +++++L DL++Q +DELSSVA EM RLIETATAPI AVD G VN
Sbjct: 478 LRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAVDSGGFVN 537
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
GWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 538 GWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 582
>gi|283131761|dbj|BAI63236.1| phytochrome E [Pieris nana]
Length = 657
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 514/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLP GDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131675|dbj|BAI63244.1| phytochrome E [Pieris nana]
Length = 657
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 514/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VL QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLWMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131673|dbj|BAI63243.1| phytochrome E [Pieris nana]
gi|283131695|dbj|BAI63254.1| phytochrome E [Pieris nana]
Length = 657
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/650 (66%), Positives = 513/650 (78%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEP R+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGM A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131759|dbj|BAI63237.1| phytochrome E [Pieris nana]
Length = 657
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 514/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSLSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLP GDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547818|gb|AEW26949.1| phytochrome P [Macrozamia spiralis]
Length = 582
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/585 (74%), Positives = 491/585 (83%), Gaps = 19/585 (3%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E TFR+IAYSENA ML LAPQSVP +E Q LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTME-QVFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HS+++GKPFYAI+HR+DVG+VID EP D A+S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEP--VGDAAMSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L +PLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFGLQLNMEL 386
YMANMGSIASL +AV+INGN + V ++ R + AFGLQLNMEL
Sbjct: 238 YMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMEL 297
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
QLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGV
Sbjct: 298 QLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMVWVLGVA 357
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWF
Sbjct: 358 PAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFLFWF 417
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLI
Sbjct: 418 RSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLI 477
Query: 567 LRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
LR SF+D + S +K +++++L DL++Q +DELSSVA EMVRLIETATAPI AVD G VN
Sbjct: 478 LRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETATAPILAVDSGGFVN 537
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
GWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LL HAL+G
Sbjct: 538 GWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 582
>gi|363547701|gb|AEW26893.1| phytochrome P [Encephalartos gratus]
Length = 582
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/595 (72%), Positives = 488/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTPPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL ++ +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLSDLRVRSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMEAVERLLHHALRG 582
>gi|283131671|dbj|BAI63242.1| phytochrome E [Pieris nana]
Length = 657
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/650 (66%), Positives = 512/650 (78%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPNFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEP R+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGM A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547501|gb|AEW26794.1| phytochrome P [Cycas aculeata]
Length = 581
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/585 (73%), Positives = 491/585 (83%), Gaps = 20/585 (3%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E TF++IAYSENA EML L PQSVP +E E+L +GTDVRTLFT SS+ LEKA
Sbjct: 1 LAVEEITFKIIAYSENAVEMLDLMPQSVPTME-HEVLALGTDVRTLFTPSSAASLEKAAV 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+ S+++GKPFYAI+HR+DVG+VID EPA D A+S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQ+LPGGDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA HGCH+Q
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRAAHGCHSQ 237
Query: 343 YMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFGLQLNMEL 386
YMANMGSIASL LAVIIN N + V ++ R + AFGLQLNMEL
Sbjct: 238 YMANMGSIASLVLAVIINANVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFGLQLNMEL 297
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
QLA+Q++EKH+LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G ++ LGVT
Sbjct: 298 QLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVT 357
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
PTE QIKDI +WLL HGDSTGLSTDSLADAGYP A+LGDAVCGMA A IT +DFLFWF
Sbjct: 358 PTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGVASLGDAVCGMAAARITSKDFLFWF 417
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTAKE+KWGGAKHHP+DK DG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLI
Sbjct: 418 RSHTAKEVKWGGAKHHPDDK-DGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLI 476
Query: 567 LRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
LR SF+D + S +K +++A+L DL +QG+DELSSVA EMVRLIETATAPI AVD G VN
Sbjct: 477 LRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAVDSGGLVN 536
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
GWNAKVAELTGL VEEAMG SLVH+LVY+E E V+ LL+HAL+G
Sbjct: 537 GWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 581
>gi|363547884|gb|AEW26982.1| phytochrome P [Zamia pygmaea]
Length = 582
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/585 (73%), Positives = 492/585 (84%), Gaps = 19/585 (3%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++ LEKA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASALSLEKAAV 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFGLQLNMEL 386
YMANMGS+ASL +AV++N N + V ++ R + AFGLQLNMEL
Sbjct: 238 YMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFGLQLNMEL 297
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
QL +QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVT
Sbjct: 298 QLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMVWMLGVT 357
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
PTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWF
Sbjct: 358 PTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFLFWF 417
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLI
Sbjct: 418 RSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLI 477
Query: 567 LRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
LR SF+D + + +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AVD G VN
Sbjct: 478 LRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAVDSGGFVN 537
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
GWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 538 GWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 582
>gi|283131687|dbj|BAI63250.1| phytochrome E [Pieris nana]
Length = 657
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/650 (66%), Positives = 513/650 (78%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLEEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEP R+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNDNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGM A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131711|dbj|BAI63240.1| phytochrome E [Pieris nana]
Length = 657
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 513/650 (78%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLP GDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMFPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131705|dbj|BAI63259.1| phytochrome E [Pieris nana]
Length = 657
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/650 (66%), Positives = 513/650 (78%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEP R+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIV QSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVMQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|283131703|dbj|BAI63258.1| phytochrome E [Pieris nana]
Length = 657
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/650 (66%), Positives = 510/650 (78%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEP R+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLPGGDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR------------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPHYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGM A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547661|gb|AEW26873.1| phytochrome P [Dioon purpusii]
Length = 590
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/592 (72%), Positives = 494/592 (83%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT +S++
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPASAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+ +NPIW+H K++GK FYAI+HR+DVG+VID EPA D A+S+AGAVQ
Sbjct: 61 SLEKAAAAQEISPMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEP GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V+Q L +PLCLVGSTLRA
Sbjct: 179 DLEPCLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRRPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV++NGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVNGNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL H D TGLSTDSLA+AGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDAVCGMAAAKITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + + +K +++A+L DL ++G+DELSS+A EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDTETKTMIHARLNDLRVRGMDELSSIASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EA GKSLV DLVY+E E V+ LL HAL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLCHALRG 590
>gi|283131755|dbj|BAI63239.1| phytochrome E [Pieris nana]
Length = 657
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/650 (67%), Positives = 514/650 (79%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSPSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLP GDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DSTGLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSCGVVENLMCRAFN 657
>gi|363547683|gb|AEW26884.1| phytochrome P [Encephalartos concinnus]
Length = 582
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/595 (72%), Positives = 487/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRS TAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547695|gb|AEW26890.1| phytochrome P [Encephalartos ferox]
Length = 582
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/595 (72%), Positives = 487/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ L HHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLPHHALRG 582
>gi|363547846|gb|AEW26963.1| phytochrome P [Zamia integrifolia]
Length = 582
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/585 (73%), Positives = 491/585 (83%), Gaps = 19/585 (3%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E TFR+IAYSENA ML LAPQSVP +E+ E+LTIGTDVRTLFT +S++ LEKA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMER-ELLTIGTDVRTLFTPASALSLEKAAV 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NP+W+HSK++GKPFYAILHR+DVG+VID EP A+S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEP--VGGAAMSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQ+LPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC A P+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRAAPVRVIQAAELTQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFGLQLNMEL 386
YMANMGS+ASL +AV++N N + V ++ R + AFGLQLNMEL
Sbjct: 238 YMANMGSVASLVMAVVMNVNMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFGLQLNMEL 297
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
QL +QL+EKH+L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G + LGVT
Sbjct: 298 QLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMVWMLGVT 357
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
PTE QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWF
Sbjct: 358 PTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFLFWF 417
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTAKEIKWGGAKHHP+DKD+G+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLI
Sbjct: 418 RSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLI 477
Query: 567 LRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
LR SF+D + + +K +++++L DL LQ +DELSSVA EMVRLIETATAPI AVD G VN
Sbjct: 478 LRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAVDSGGFVN 537
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
GWNAK+AELTGL V EAMGKSLV DL+Y+E E V+ LLHHAL+G
Sbjct: 538 GWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 582
>gi|283131763|dbj|BAI63235.1| phytochrome E [Pieris nana]
Length = 657
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/650 (66%), Positives = 513/650 (78%), Gaps = 19/650 (2%)
Query: 39 SKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQP 98
SKA+A Y DA L F+QS +SGKSF+YS+SV +VP +QI+AYLS+IQRGG IQP
Sbjct: 9 SKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGLIQP 68
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A++E +F++I YSEN +LGL +V QE IG D RTLF+ SS V L
Sbjct: 69 FGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFE-SNQERGLIGIDARTLFSLSSGVSLV 127
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 218
A G++EI+LLNPIW+HS+NT KPFYAILHR+DVGIVIDLEPAR+ DPALS+AGAVQSQK
Sbjct: 128 NAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAVQSQK 187
Query: 219 LAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLE 278
L VRAIS+LQSLP GDI +LCD VVE V++LTGYDRVMVY+FH+D+HGEVV+E + DLE
Sbjct: 188 LVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRSTDLE 247
Query: 279 PYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHG 338
PY GLHYPATDIPQA+RFLFKQNRVRMI DCH++ + VI + L QPLCLV STLRAPHG
Sbjct: 248 PYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLRAPHG 307
Query: 339 CHAQYMANMGSIASLALAVIINGNDEEAVGG-----RSTTR-------------LWAFGL 380
CH QYMANMGSIASL LAV++N ND + G ++ R + AFGL
Sbjct: 308 CHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGL 367
Query: 381 QLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKY 440
QL MELQLASQL EK VLR QTLLCDM LRD+P GIVTQSPSIMDLVKCDGAAL+Y GK
Sbjct: 368 QLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFYCGKC 427
Query: 441 YPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKR 500
+ LGVTPT++Q+KDI EWLL H DS GLSTDSLADAGYP AA LGDAVCGMA A IT +
Sbjct: 428 WLLGVTPTKSQVKDIAEWLLKNHADSKGLSTDSLADAGYPSAALLGDAVCGMATARITSK 487
Query: 501 DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAI 560
DFLFWFRSHTAKE+KWGGA HHPEDKDDG RM+PRSSF AFLEVVKSRSLPW+ +E++AI
Sbjct: 488 DFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISEINAI 547
Query: 561 HSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVD 620
HSLQLI+RDS+R E S K +V Q+ D ++QG+DELSSVA EMVRLIETA+APIF VD
Sbjct: 548 HSLQLIMRDSYRMIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAPIFGVD 607
Query: 621 VHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK 670
G +NGWNAK+ ELTGL EA+GKSL++D+V ++ +V+NL+ A
Sbjct: 608 SAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAFN 657
>gi|363547767|gb|AEW26925.1| phytochrome P [Encephalartos whitelockii]
Length = 582
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/595 (72%), Positives = 488/595 (82%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+ING+ T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGD----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA++L+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAARLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547765|gb|AEW26924.1| phytochrome P [Encephalartos villosus]
Length = 582
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/595 (72%), Positives = 487/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQ+LAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQRLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNR RMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRARMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVAGEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547703|gb|AEW26894.1| phytochrome P [Encephalartos hildebrandtii]
Length = 582
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/595 (72%), Positives = 486/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVR I DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRTICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+ QTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKIQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547742|gb|AEW26913.1| phytochrome P [Encephalartos paucidentatus]
Length = 582
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/595 (72%), Positives = 487/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+ V+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS+V LEKA
Sbjct: 1 LGVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAVSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELGQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKE+KWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLP +NAE
Sbjct: 408 ITAKDFLFWFRSHTAKEMKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPRENAE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547748|gb|AEW26916.1| phytochrome P [Encephalartos schaijesii]
gi|363547750|gb|AEW26917.1| phytochrome P [Encephalartos schmitzii]
Length = 590
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/602 (73%), Positives = 493/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDD +RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547719|gb|AEW26902.1| phytochrome P [Encephalartos laurentianus]
Length = 582
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/595 (72%), Positives = 484/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L NPIW+HSK++GKPFYAI+H +DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLTNPIWMHSKSSGKPFYAIVHGIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+ QTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKIQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIAGWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547675|gb|AEW26880.1| phytochrome P [Encephalartos barteri]
gi|363547727|gb|AEW26906.1| phytochrome P [Encephalartos macrostrobilus]
Length = 590
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/602 (72%), Positives = 492/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDD +RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547895|gb|AEW26987.1| phytochrome P [Araucaria heterophylla]
Length = 558
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/559 (76%), Positives = 474/559 (84%), Gaps = 19/559 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TF +IAYSENA EML L PQSVPN++ + ++TIGTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDGR-VMTIGTDVRTLFTPSSAR 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LLEKA A EI+L+NPIW+HSKNT KPFYAI+HR+DVG+VIDLEP D ALS AGAVQ
Sbjct: 61 LLEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVGMVIDLEP--VGDAALSAAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLP GDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEV+AE +R
Sbjct: 119 SQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVLAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A P+ VIQ E L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAPVKVIQAEELKQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV+INGN + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVINGNMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+QL+EKH+LRTQTLLCDMLLRD+P GIVT SPSIMDLVKCDGAALYY G
Sbjct: 299 LQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTPTE QIKDI +WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 CWMLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 KDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + SN+K +V+A+L DL+LQG+DELS VA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGL 638
D +G +NGWNAKVAELTGL
Sbjct: 539 DSNGLINGWNAKVAELTGL 557
>gi|363547756|gb|AEW26920.1| phytochrome P [Encephalartos septentrionalis]
Length = 590
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/602 (72%), Positives = 492/602 (81%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSAL 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGDI LLCDTVVE VR+LTGYDRV+VYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVVVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMA+MGSIASL +AV+INGN T+LW
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRY 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVT+SPSIMDLVKC
Sbjct: 289 ACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTESPSIMDLVKC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAALYY G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRSHTAKEIKWGGAKH P+DKDD +RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
LPW+N EMDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLI
Sbjct: 469 LPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY+E E V+ LLHHAL
Sbjct: 529 ETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLHHAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547677|gb|AEW26881.1| phytochrome P [Encephalartos bubalinus]
Length = 582
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/595 (72%), Positives = 487/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDD +RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|218683865|gb|ACL00887.1| phytochrome B [Cardamine concatenata]
Length = 544
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/544 (77%), Positives = 460/544 (84%), Gaps = 33/544 (6%)
Query: 186 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 245
ILHR+DVG+VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 246 VRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRM 305
VR LTGYDRVMVY+FHEDEHGEVVAESKR DL+PYFGLHYPATDIPQASRFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLQPYFGLHYPATDIPQASRFLFKQNRVRM 120
Query: 306 IVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEE 365
IVDCHATP+ ++QD+ L Q +CLVGSTLRAPHGCH+QYMANMGSIASLA+AVIINGN+EE
Sbjct: 121 IVDCHATPVLLVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEE 180
Query: 366 AV---GGRSTTRLW--------------------------AFGLQLNMELQLASQLSEKH 396
GGR++ RLW AFGLQLNMELQLA Q+SEK
Sbjct: 181 GNNVGGGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 397 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIV 456
VLRTQTLLCDMLLRDSPAGIVTQSPSIM+LVKCDGAA Y GKYY LG++PTE QIKD+V
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMNLVKCDGAAFLYHGKYYLLGISPTEAQIKDVV 300
Query: 457 EWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 516
EWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAYIT RDFLFWFRSHT KEIKW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITNRDFLFWFRSHTEKEIKW 360
Query: 517 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA 576
GGAKHHPEDKDDGQRMHPR SF+AFLEVVKSRS PW+ AEMDAIHSLQLILRDSF+++EA
Sbjct: 361 GGAKHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 577 S-NSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKV 632
+ NSKA A ++ QG+DEL +VAREMVRLIETAT PIFAVD G +NGWNAK+
Sbjct: 421 AMNSKAAYGAVQPCRDMSGEQGLDELGAVAREMVRLIETATVPIFAVDAGGYINGWNAKI 480
Query: 633 AELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKA 692
AELTGLSVEEAMGKSLV DL+YKE EEIV LL AL+G+EDKNVE+KL+TF E KA
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEEIVIKLLSRALRGDEDKNVEVKLKTFRPELHGKA 540
Query: 693 VFVV 696
VF+V
Sbjct: 541 VFMV 544
>gi|363547732|gb|AEW26908.1| phytochrome P [Encephalartos msinganus]
Length = 582
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/595 (72%), Positives = 487/595 (81%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E T+R+IAYSENA ML LAPQSVP +E +E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTME-EEFLTIGTDVRTLFTPSSALPLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L+NPIW+HSK++GKPFYAI+HR+DVG+VID EP D A S+AGAVQSQKLAVR
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEP--VGDAATSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQSLPGGDI LLCDTVVE VR+LTGYDRVMVYRFHEDEHGEVVAE +R DLEPY G
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMA+MGSIASL +AV+INGN T+LW
Sbjct: 238 YMASMGSIASLVMAVVINGN----------TKLWGLVVCHHTSPRAVPFPLRYACEILMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNME+QLA+QL+EK +L+TQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY
Sbjct: 288 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGLVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRSHTAKEIKWGGAKH P+DKDD +RMHPRSSFKAFLEVVK RSLPW+N E
Sbjct: 408 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWENVE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF+D + S +K +++++L DL +Q +DELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EAMGKSLV DLVY+E E V+ LLHHAL+G
Sbjct: 528 LAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547643|gb|AEW26864.1| phytochrome P [Ceratozamia mirandae]
Length = 590
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/603 (69%), Positives = 482/603 (79%), Gaps = 39/603 (6%)
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +EK E LTIGTDVRTLFT SS+
Sbjct: 1 RIQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEK-EFLTIGTDVRTLFTPSSA 59
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
+ LEKA A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAV
Sbjct: 60 MSLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAV 117
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGSIASL +AV++N N T+LW
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNAN----------TKLWGLVVCHHASPRAVPFPVR 287
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA+Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL Y G + LGV P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA A IT +DFLFWFRS TAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
S PW+NAEMDAIHSLQLILR SF D + + +K +V+++L DL +Q ++ELSSVA EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDAETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY++ E V+ LL +A
Sbjct: 528 IETATAPILAVDSCGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 669 LKG 671
L+G
Sbjct: 588 LRG 590
>gi|57281885|emb|CAC85513.1| phytochrome A [Triticum aestivum]
Length = 807
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/799 (53%), Positives = 548/799 (68%), Gaps = 40/799 (5%)
Query: 99 FGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLE 158
FGC +A+DE +F VIA+SENA EML +VP++ L IGT+VR+LFT + L
Sbjct: 1 FGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVNDPPRLDIGTNVRSLFTDQGATALH 60
Query: 159 KAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPAR-TEDPALSIAGAVQSQ 217
KA G +++LLNPI + K +GKPFYAI+HR +V+D EP TE PA S AGA+QS
Sbjct: 61 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPA-SAAGALQSY 119
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AIS++Q+LPGG I+LLC+TVV+ V +LTGYDRVM Y+FHED HGEV AE +P L
Sbjct: 120 KLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPGL 179
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQA+RFLF +N+VRMI D + + VI+DE L + L GS LRA H
Sbjct: 180 EPYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKVIEDEALPFDISLCGSALRAAH 239
Query: 338 GCHAQYMANMGSIASLALAVIINGNDE-EAVGGRSTTR------LWA------------- 377
CH QYM NM SIASL +AV++N N+E + VG + LW
Sbjct: 240 SCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQQKKILWGLVVCHHESPRYVP 299
Query: 378 -------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRD-SPAGIVTQSPSI 423
F + +N E ++ QL EK +LRTQT+L DML ++ SP IV+ +P+I
Sbjct: 300 FPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTILSDMLFKEASPLTIVSGAPNI 359
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDL+KCDGAAL Y K + LG PTE+QI+D+ WL H DSTGLST+SL DAGYP A+
Sbjct: 360 MDLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPGAS 419
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
LGD+VCGMAVA I D LFWFRSHTA+EI+WGGAK+ P D+DD +RMHPR SFKAFLE
Sbjct: 420 ALGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKNDPSDQDDSRRMHPRLSFKAFLE 479
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
VVK +SL W ++EMDAIHSLQLILR + KA ++ Q+ DL+L G+ EL +V
Sbjct: 480 VVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGLAELQAVTS 539
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVRL+ETAT PI AVD +G VNGWN K AELTGL V++A+G+ ++ LV + +V
Sbjct: 540 EMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSVSVVQR 598
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQK 723
+L+ AL+G+E+K V +++T G + V +VVNAC+S+D +++VGVCFV QDVT K
Sbjct: 599 MLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDVTVHK 658
Query: 724 LVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLV 783
LVMDKF ++GDY AI+H+PNPLIPPIF +DE C EWN AM KLTGW R +++ KML+
Sbjct: 659 LVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEVLNKMLL 718
Query: 784 GEVFGS---CCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRV 840
GEVF S C LK DA + +++A G++TEK PF FDR+GKY LL+ N+R
Sbjct: 719 GEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDCLLSVNRRE 778
Query: 841 NMEGQIVGAFCFLQIASPE 859
N G I G FCF+ I S E
Sbjct: 779 NEGGLITGVFCFIHIPSHE 797
>gi|363547647|gb|AEW26866.1| phytochrome P [Ceratozamia morettii]
Length = 590
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/603 (69%), Positives = 481/603 (79%), Gaps = 39/603 (6%)
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +EK E LTIGTDVRTLFT SS+
Sbjct: 1 RIQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEK-EFLTIGTDVRTLFTPSSA 59
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
+ LEKA A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAV
Sbjct: 60 MSLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAV 117
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGSIASL +AV++N N T+LW
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNAN----------TKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA+Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL Y G + LGV P E QI+DI +WLL HGD TGLSTDSLADAGYP AA+LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIRDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA A IT +DFLFWFRS TAKEIKWGG KHHP+D+DDG+RMHPRSSFKAFLEVVK R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGEKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
S PW+NAEMDAIHSLQLILR SF D + + +K +V+++L DL +Q ++ELSSVA EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY++ E V+ LL +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 669 LKG 671
L+G
Sbjct: 588 LRG 590
>gi|363547629|gb|AEW26857.1| phytochrome P [Ceratozamia decumbens]
Length = 590
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/603 (69%), Positives = 480/603 (79%), Gaps = 39/603 (6%)
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +EK E LTIGTDVRTLFT SS+
Sbjct: 1 RIQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEK-EFLTIGTDVRTLFTPSSA 59
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
+ LEKA A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAV
Sbjct: 60 MSLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAV 117
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVSSTLR 237
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGSIASL +AV++N N T+LW
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNAN----------TKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA+Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL Y G + LGV P E QIKDI +WLL HGD TG STDSLADAGYP AA+LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGPSTDSLADAGYPGAASLGDA 407
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA A IT +DFLFWFRS TAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
S PW+NAEMDAIHSLQLILR SF D + + +K +V+++L DL +Q ++ELSSVA EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY++ E V+ LL +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 669 LKG 671
L+G
Sbjct: 588 LRG 590
>gi|363547633|gb|AEW26859.1| phytochrome P [Ceratozamia huastecorum]
Length = 590
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/603 (69%), Positives = 480/603 (79%), Gaps = 39/603 (6%)
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC +AV+E TFR+IAYSENA ML LAPQ VP +EK E LTIGTDVRTLFT SS+
Sbjct: 1 RIQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQLVPTMEK-EFLTIGTDVRTLFTPSSA 59
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
+ LEKA A+EI+L NPI I S+++GK FYAI+HR+DVG+VID EP D ALS+AGAV
Sbjct: 60 MSLEKAAAAQEISLANPISIQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAV 117
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGSIASL +AV++N N T+LW
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNAN----------TKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMEL+LA+Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELRLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL Y G + LGV P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA A IT +DFLFWFRS TAKEIKWGGAKHHP+D+DD +RMHPRSSFKAFLEVVK R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRR 467
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
S PW+NAEMDAIHSLQLILR SF D + + +K +V+++L DL +Q ++ELSSVA EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY++ E V+ LL +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 669 LKG 671
L+G
Sbjct: 588 LRG 590
>gi|363547653|gb|AEW26869.1| phytochrome P [Ceratozamia zaragozae]
Length = 590
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/602 (69%), Positives = 480/602 (79%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +EK E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEK-EFLTIGTDVRTLFTPSSAM 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAVQ
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL +AV++N N T+LW
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVNAN----------TKLWGLVVCHHTSPRTVPFPVRC 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNMELQLA+Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+C
Sbjct: 289 ACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAAL Y G + LGV P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRS TAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
PW+NAEMDAIHSLQLILR SF D + + +K +V+++L DL + ++ELSSVA EMVRLI
Sbjct: 469 FPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVHSMEELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY++ E V+ LL +A
Sbjct: 529 ETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNAS 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547651|gb|AEW26868.1| phytochrome P [Ceratozamia whitelockiana]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/603 (69%), Positives = 480/603 (79%), Gaps = 39/603 (6%)
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +EK E LTIGTDVRTL T SS+
Sbjct: 1 RIQPFGCMLAVEERTFRIIAYSENATGMLDLAPQSVPTMEK-EFLTIGTDVRTLLTPSSA 59
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
+ LEKA A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAV
Sbjct: 60 MSLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAV 117
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGSIASL +AV++N N T+LW
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNAN----------TKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA+Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL Y G + LGV E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDA
Sbjct: 348 CDGAALCYGGTVWALGVALAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA A IT +DFLFWFRS TAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
S PW+NAEMDAIHSLQLILR SF D + + +K +V+++L DL +Q ++ELSSVA EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDAETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY++ E V+ LL +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 669 LKG 671
L+G
Sbjct: 588 LRG 590
>gi|363547824|gb|AEW26952.1| phytochrome P [Stangeria eriopus]
Length = 590
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/592 (71%), Positives = 485/592 (81%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E QE+L +G DVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAPAMLDLAPQSVPTME-QELLAVGADVRTLFTPSSAA 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L NPI ++S+++GKPFYAILHR+DVG+VID EP D A S+AGAVQ
Sbjct: 61 SLEKAAAAQEISLTNPILMYSRSSGKPFYAILHRIDVGMVIDFEP--VGDAATSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQSLPGGD+ LLCD VVE VR++ GYDRVMVYRFHEDEHGEVVAE +R
Sbjct: 119 SQKLAVRAISRLQSLPGGDLGLLCDAVVEEVREMAGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A P+ VIQ L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAKPVRVIQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYM NMGSIASL +AV+IN N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMVNMGSIASLVMAVVINVNMKLWGLVVCHHTSPRAVPFPVRCACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQ+NMELQLA+QL+EKH+L+TQTLLCDMLLRD+P GIVTQ+PS+MDLVKCDGAALYY G
Sbjct: 299 LQVNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQTPSVMDLVKCDGAALYYGGM 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGVTP E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT+
Sbjct: 359 VWALGVTPAEPQIKDIADWLLACHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITE 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 419 NDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + +K +++++L DL LQ +DELS VA EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFQDIGDTETKTMIHSRLNDLRLQSMDELSCVASEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EA GKSLV DLVY+E E V+ LL +AL+G
Sbjct: 539 DSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMEAVERLLCNALRG 590
>gi|363547645|gb|AEW26865.1| phytochrome P [Ceratozamia mixeorum]
Length = 590
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/602 (69%), Positives = 479/602 (79%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +E +E LT+GTDVRTLFT SS+
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTME-EEFLTVGTDVRTLFTPSSAT 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAVQ
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELKQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL +AV++N N T+LW
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVNAN----------TKLWGLVVCHHTSPRAVPFPVRC 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNMELQLA+Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+C
Sbjct: 289 ACEFLMQAFGLQLNMELQLATQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAAL Y G + LGV P E QIK I +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALCYGGTVWALGVAPAEAQIKGIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRS TAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
PW+NAEMDAIHSLQLIL SF D + + +K +V+++L DL +Q ++ELSSVA EMVRLI
Sbjct: 469 FPWENAEMDAIHSLQLILHGSFGDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY++ E V+ LL +AL
Sbjct: 529 ETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNAL 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|406685313|gb|AFS51097.1| phytochrome P, partial [Athrotaxis selaginoides]
Length = 594
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/595 (70%), Positives = 476/595 (80%), Gaps = 42/595 (7%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLA----PQSVPNLEKQEILT 140
AYLS++QRGG IQPFGC +AV+E +FR+IAYSENA EML A QSVP++E + +
Sbjct: 1 AYLSRMQRGGRIQPFGCMLAVEENSFRIIAYSENAAEMLDAAGKSESQSVPDMEIRVAVR 60
Query: 141 IGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEP 200
IG+DVR LF S+ LE+A +EI++ NPI SK +GKPFYAI+HR+DVGIVIDLEP
Sbjct: 61 IGSDVRRLFKPWSARNLERAAMTQEISVSNPIAAESK-SGKPFYAIVHRIDVGIVIDLEP 119
Query: 201 ARTEDPALSIAGAVQ---------SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTG 251
R E+ A +A SQ+LAVRAIS+LQ++P GDI LLCD VVE VR+LTG
Sbjct: 120 VRREEAAALVAWGGAEGMAGGAMPSQRLAVRAISRLQAVPNGDIGLLCDAVVEEVRELTG 179
Query: 252 YDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHA 311
YDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC
Sbjct: 180 YDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRV 239
Query: 312 TPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGG 369
+P+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN DEE G
Sbjct: 240 SPVSVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGGSG 299
Query: 370 RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTL 403
R++ +LW FGLQ+NMELQLA+QL+E ++LRTQTL
Sbjct: 300 RTSMKLWGLVVCHHTSPRAVPFPLRSACGFLMQTFGLQINMELQLAAQLTENNILRTQTL 359
Query: 404 LCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYH 463
LCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY GK++ LGVTPTE QIKDI +WLL YH
Sbjct: 360 LCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYH 419
Query: 464 GDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHP 523
GDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP
Sbjct: 420 GDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHP 479
Query: 524 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVV 583
+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K +V
Sbjct: 480 DDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMV 539
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGL 638
+AQL DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKVAELTGL
Sbjct: 540 HAQLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSGGIVNGWNAKVAELTGL 594
>gi|363547637|gb|AEW26861.1| phytochrome P [Ceratozamia mexicana]
Length = 590
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/603 (68%), Positives = 478/603 (79%), Gaps = 39/603 (6%)
Query: 95 HIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSS 154
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +EK E LTIGTDVRTLFT SS+
Sbjct: 1 RIQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEK-EFLTIGTDVRTLFTPSSA 59
Query: 155 VLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAV 214
+ LEKA A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAV
Sbjct: 60 MSLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAV 117
Query: 215 QSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKR 274
QSQKLAVRAIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 275 PDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLR 334
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 335 APHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------ 376
APHGCHAQYMANMGSIASL +AV++N N T+LW
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNAN----------TKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 --------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVK 428
AFGLQLNMELQLA+Q +EK +L+T TLLCDMLLRD+P GIVTQ+PSIMDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTLTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 429 CDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDA 488
CDGAAL Y G + LGV P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 489 VCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 548
VCGMA A IT +DFLFWFRS TAKEIKWGG KHHP+D+DD +RMHPRSSFKAFLEVVK R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGEKHHPDDRDDARRMHPRSSFKAFLEVVKRR 467
Query: 549 SLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRL 608
S PW+NAEMDAIHSLQLILR SF D + + +K +V+++L DL +Q ++ELSSVA EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 609 IETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHA 668
IETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY++ E V+ LL +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 669 LKG 671
+G
Sbjct: 588 SRG 590
>gi|363547635|gb|AEW26860.1| phytochrome P [Ceratozamia latifolia]
Length = 590
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/602 (69%), Positives = 478/602 (79%), Gaps = 39/602 (6%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +EK E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEK-EFLTIGTDVRTLFTPSSAM 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAVQ
Sbjct: 61 SLEKAAAAQEISLTNPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCCSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTRLW------------------- 376
PHGCHAQYMANMGSIASL +AV++N N T+LW
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVNAN----------TKLWGLVVCHHTSPRTVPFPVRC 288
Query: 377 -------AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 429
AFGLQLNMELQLA+Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+C
Sbjct: 289 ACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRC 348
Query: 430 DGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAV 489
DGAAL Y G + LGV P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAV
Sbjct: 349 DGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAV 408
Query: 490 CGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 549
CGMA A IT +DFLFWFRS TAKEIKWGGAKHHP+D+DD +RMHPRSSFKAFLEVVK RS
Sbjct: 409 CGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRRS 468
Query: 550 LPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLI 609
PW+NAEMDAIHSLQLILR F D + + +K +V+++L DL + ++ELSSVA EMVRLI
Sbjct: 469 FPWENAEMDAIHSLQLILRGCFEDIDDTETKTMVHSRLNDLRVHSMEELSSVASEMVRLI 528
Query: 610 ETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHAL 669
ETATAPI AVD G VNGWNAK+AELTGL V EA GKSLV DLVY++ E V+ LL +A
Sbjct: 529 ETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNAS 588
Query: 670 KG 671
+G
Sbjct: 589 RG 590
>gi|363547639|gb|AEW26862.1| phytochrome P [Ceratozamia microstrobila]
Length = 590
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/592 (69%), Positives = 478/592 (80%), Gaps = 19/592 (3%)
Query: 96 IQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSV 155
IQPFGC +AV+E TFR+IAYSENA ML LAPQSVP +EK E LTIGTDVRTLFT SS++
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEK-EFLTIGTDVRTLFTPSSAM 60
Query: 156 LLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQ 215
LEKA A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAVQ
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAVQ 118
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQKLAVRAIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AV++N N + V ++ R + AFG
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVNANAKLWGLVVCHHTSPRTVPFPVRCACEFLMQAFG 298
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQLNMELQLA+Q EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+CDGAAL Y G
Sbjct: 299 LQLNMELQLAAQAMEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCYGGT 358
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
+ LGV P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 359 VWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITA 418
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRS TAKEIKWGG KHHP+D+DDG+RMHPRSSFKAFLEVVK RS PW+NAEMDA
Sbjct: 419 KDFLFWFRSQTAKEIKWGGEKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAEMDA 478
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF D + + +K +V+++L DL + ++ELSSV EMVRLIETATAPI AV
Sbjct: 479 IHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVHSMEELSSVVSEMVRLIETATAPILAV 538
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK+AELTGL V EA GKSLV DLV ++ E V+ LL +A +G
Sbjct: 539 DSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVCEDSMETVERLLRNASRG 590
>gi|363547641|gb|AEW26863.1| phytochrome P [Ceratozamia miqueliana]
Length = 582
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/595 (69%), Positives = 475/595 (79%), Gaps = 39/595 (6%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E TFR+IAYSENA ML LAPQSVP +EK E LTIGTDVRTL T SS++ LEKA
Sbjct: 1 LAVEERTFRIIAYSENAAGMLDLAPQSVPTMEK-EFLTIGTDVRTLLTPSSAMPLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAVQSQKLAVR
Sbjct: 60 AQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R DLEPY G
Sbjct: 118 AISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEEAVGGRSTTRLW-------------------------- 376
YMANMGSIASL +AV++N N T+LW
Sbjct: 238 YMANMGSIASLVMAVVVNAN----------TKLWGLVVCHHTSPRAVPFPVRCACEFLMQ 287
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNMELQLA+Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+CDGAAL Y
Sbjct: 288 AFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCY 347
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G + LGV P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A
Sbjct: 348 GGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 407
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
IT +DFLFWFRS TAKEIKWGGAKHHP+D+DDG+RMHPRSSFKAFLEVVK RS PW+NAE
Sbjct: 408 ITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAE 467
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPI 616
MDAIHSLQLILR SF D + + +K +V+++L DL +Q ++ELSSVA EMVRLIETATAPI
Sbjct: 468 MDAIHSLQLILRGSFEDIDDAETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAPI 527
Query: 617 FAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
AVD G VNGWNAK+AELTGL V EA GKSLV DLVY++ E V+ LL +AL+G
Sbjct: 528 LAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNALRG 582
>gi|363547649|gb|AEW26867.1| phytochrome P [Ceratozamia sabatoi]
Length = 582
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/585 (70%), Positives = 476/585 (81%), Gaps = 19/585 (3%)
Query: 103 IAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFG 162
+AV+E TFR+IAYSENA ML LAPQSVP +EK E LTIGTDVRTLFT SS++ LEKA
Sbjct: 1 LAVEERTFRIIAYSENAAGMLDLAPQSVPTMEK-EFLTIGTDVRTLFTPSSAMSLEKAAA 59
Query: 163 AREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVR 222
A+EI+L NPI + S+++GK FYAI+HR+DVG+VID EP D ALS+AGAVQSQKLAVR
Sbjct: 60 AQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAVQSQKLAVR 117
Query: 223 AISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFG 282
AIS+LQ+LP GDI +LCD+VV+ VR+LTGYDRVMVY FHEDEHGEV+AE +R DLEPY G
Sbjct: 118 AISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYGFHEDEHGEVMAEMRRSDLEPYLG 177
Query: 283 LHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQ 342
LHYPATDIPQASRFLF QNRVRMI DC + P+ V+Q L QPLCLVGSTLRAPHGCHAQ
Sbjct: 178 LHYPATDIPQASRFLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 343 YMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFGLQLNMEL 386
YMANMGSIASL +AV++N N + V ++ R + AFGLQLNMEL
Sbjct: 238 YMANMGSIASLVMAVVVNANAKLWGLVVCHHTSPRTVPFPVRCACEFLMQAFGLQLNMEL 297
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
QLA+Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+CDGAAL Y G + LGV
Sbjct: 298 QLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCYGGTVWALGVA 357
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
P E QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWF
Sbjct: 358 PAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFLFWF 417
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RS TAKEIKWGGAKHHP+D+DD +RMHPRSSFKAFLEVVK RS PW+NAEMDAIHSLQLI
Sbjct: 418 RSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRRSFPWENAEMDAIHSLQLI 477
Query: 567 LRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
LR SF D + + +K +V+++L DL +Q ++ELSSVA EMVRLIETATAPI AVD G VN
Sbjct: 478 LRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAPILAVDSRGLVN 537
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
GWNAK+AELTGL V EA G+SLV DLVY++ E V+ LL +AL+G
Sbjct: 538 GWNAKIAELTGLPVGEATGRSLVGDLVYEDSMETVERLLRNALRG 582
>gi|406685271|gb|AFS51076.1| phytochrome P, partial [Cephalotaxus fortunei]
Length = 604
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/605 (69%), Positives = 476/605 (78%), Gaps = 52/605 (8%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS----------VPNLE 134
AYLS++QRGG IQPFGC +AV+E +F++IAYSENA EML + P S VP +E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSHSVPTME 60
Query: 135 KQE---ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVD 191
E I+TIG+DVR LFT SS LE+A ++EI+L NPI + S N+GKPFYAI+HR+D
Sbjct: 61 GGESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMDS-NSGKPFYAIVHRID 119
Query: 192 VGIVIDLEPARTEDPALSIA--------GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVV 243
VGIVIDLE R D A ++ G V SQ+LAVRA S+LQ++P GDI LLCDTVV
Sbjct: 120 VGIVIDLELVRRGDAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDTVV 179
Query: 244 ESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRV 303
E VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRV
Sbjct: 180 EEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRV 239
Query: 304 RMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN- 362
RMI DC ATP+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN
Sbjct: 240 RMICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNG 299
Query: 363 -DEEAVGG--RSTTRLWA--------------------------FGLQLNMELQLASQLS 393
DE+ V G RS+ +LW FGLQ+NMELQLA+QL+
Sbjct: 300 NDEDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLT 359
Query: 394 EKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIK 453
E ++LRTQTLLCDMLLRD+P GIV+QSPSIMDLVKCDGAALYY G ++ LGVTP E QIK
Sbjct: 360 ENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMFWLLGVTPVEAQIK 419
Query: 454 DIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKE 513
DI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE
Sbjct: 420 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 479
Query: 514 IKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRD 573
+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW N EMDAIHSLQLILR SF D
Sbjct: 480 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWGNVEMDAIHSLQLILRGSFED 539
Query: 574 AEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVA 633
+ S++K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV
Sbjct: 540 IDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNAKVG 599
Query: 634 ELTGL 638
ELTGL
Sbjct: 600 ELTGL 604
>gi|373842328|gb|AEY77153.1| phytochrome B, partial [Brassica juncea]
Length = 514
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/514 (77%), Positives = 432/514 (84%), Gaps = 32/514 (6%)
Query: 286 PATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMA 345
PATDIPQASRFLFKQNRVRMIVDCHATP+ V+QD+ L Q +CLVGSTLRAPHGCH+QYMA
Sbjct: 1 PATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMA 60
Query: 346 NMGSIASLALAVIINGNDEEA---VGGRSTTRLW-------------------------- 376
NMGSIASL +AVIINGN+++ GGRS+ RLW
Sbjct: 61 NMGSIASLTMAVIINGNEDDGSNVAGGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQ 120
Query: 377 AFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYY 436
AFGLQLNMELQLA Q+SEK VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA Y
Sbjct: 121 AFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLY 180
Query: 437 QGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAY 496
G YYPLGV PTE QIKD+VEWLL H DSTGLSTDSL DAGYP AA LGDAVCGMAVAY
Sbjct: 181 HGNYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAY 240
Query: 497 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAE 556
ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS PW+ AE
Sbjct: 241 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAE 300
Query: 557 MDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLEL---QGVDELSSVAREMVRLIETAT 613
MDAIHSLQLILRDSF+++EA+ + + + + QG+DEL +VAREMVRLIETAT
Sbjct: 301 MDAIHSLQLILRDSFKESEAAMNSKTADGAVQPYSMAGEQGIDELGAVAREMVRLIETAT 360
Query: 614 APIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEE 673
PIFAVDV GC+NGWNAK+AELTGLSVEEAMGKSLV DL+YKE EE VD L+ AL+G+E
Sbjct: 361 VPIFAVDVGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVDKLISRALRGDE 420
Query: 674 DKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQ 733
DKNVEIKL+TF E + KAVFVVVNACSSKDY+NNIVGVCFVGQDVT QK+VMDKFI+IQ
Sbjct: 421 DKNVEIKLKTFSPELQGKAVFVVVNACSSKDYSNNIVGVCFVGQDVTGQKIVMDKFINIQ 480
Query: 734 GDYKAIVHSPNPLIPPIFASDENTCCSEWNTAME 767
GDYKAIVHSPNPLIPPIFA+DENTCC EWNTA+E
Sbjct: 481 GDYKAIVHSPNPLIPPIFAADENTCCLEWNTALE 514
>gi|406685277|gb|AFS51079.1| phytochrome P, partial [Cephalotaxus sinensis]
Length = 604
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/605 (68%), Positives = 475/605 (78%), Gaps = 52/605 (8%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS----------VPNLE 134
AYLS++QRGG IQPFGC +AV+E +F++IAYSENA EML + P S VP +E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSHSVPTME 60
Query: 135 KQE---ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVD 191
E I+TIG+DVR LFT SS LE+A ++EI+L NPI + S ++GKPFYAI+HR+D
Sbjct: 61 GGESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMDS-SSGKPFYAIVHRID 119
Query: 192 VGIVIDLEPARTEDPALSIA--------GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVV 243
VGIVIDLE R D A ++ G V SQ+LAVRA S+LQ++P GDI LLCDTVV
Sbjct: 120 VGIVIDLELVRRGDAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDTVV 179
Query: 244 ESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRV 303
E VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRV
Sbjct: 180 EEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRV 239
Query: 304 RMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN- 362
RMI DC ATP+ VIQ E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN
Sbjct: 240 RMICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNG 299
Query: 363 -DEEAVGG--RSTTRLWA--------------------------FGLQLNMELQLASQLS 393
DE+ V G RS+ +LW FGLQ+NMELQLA+QL+
Sbjct: 300 NDEDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLT 359
Query: 394 EKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIK 453
E ++LRTQTLLCDMLLRD+P GIV+QSPSIMDLVKCDGAALYY G + LGVTP E QIK
Sbjct: 360 ENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMLWLLGVTPVEAQIK 419
Query: 454 DIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKE 513
DI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE
Sbjct: 420 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 479
Query: 514 IKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRD 573
+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF
Sbjct: 480 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFEG 539
Query: 574 AEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVA 633
+ S++K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV
Sbjct: 540 IDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNAKVG 599
Query: 634 ELTGL 638
ELTGL
Sbjct: 600 ELTGL 604
>gi|406685273|gb|AFS51077.1| phytochrome P, partial [Cephalotaxus harringtonia]
Length = 604
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/605 (68%), Positives = 474/605 (78%), Gaps = 52/605 (8%)
Query: 85 AYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS----------VPNLE 134
AYLS++QRGG IQPFGC +AV+E +F++IAYSENA EML + P S VP +E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSHSVPTME 60
Query: 135 KQE---ILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHRVD 191
E I+TIG+DVR LFT SS LE+A ++EI+L NPI + S N+GKPFYAI+HR+D
Sbjct: 61 GGESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMDS-NSGKPFYAIVHRID 119
Query: 192 VGIVIDLEPARTEDPALSIA--------GAVQSQKLAVRAISQLQSLPGGDIKLLCDTVV 243
VGIVIDLE R + A ++ G V SQ+LAVRA S+LQ++P GDI LLCDTVV
Sbjct: 120 VGIVIDLELVRRGNAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDTVV 179
Query: 244 ESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRV 303
E VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF Q+RV
Sbjct: 180 EEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQDRV 239
Query: 304 RMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN- 362
RMI DC ATP+ VIQ E L QPLCLVGSTLRAPHGCHA YMANMGSIASL +AVI+NGN
Sbjct: 240 RMICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAXYMANMGSIASLVMAVIVNGNG 299
Query: 363 ---DEEAVGGRSTTRLWA--------------------------FGLQLNMELQLASQLS 393
D + GRS+ +LW FGLQ+NMELQLA+QL+
Sbjct: 300 NGEDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLT 359
Query: 394 EKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIK 453
E ++LRTQTLLCDMLLRD+P GIV+QSPSIMDLVKCDGAALYY G ++ LGVTP E QIK
Sbjct: 360 ENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMFWLLGVTPVEAQIK 419
Query: 454 DIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKE 513
DI +WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE
Sbjct: 420 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 479
Query: 514 IKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRD 573
+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDAIHSLQLILR SF D
Sbjct: 480 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFED 539
Query: 574 AEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVA 633
+ S++K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWNAKV
Sbjct: 540 IDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNAKVG 599
Query: 634 ELTGL 638
ELTGL
Sbjct: 600 ELTGL 604
>gi|371940272|dbj|BAL45573.1| truncate phytochrome A2 protein [Glycine max]
Length = 759
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/740 (54%), Positives = 531/740 (71%), Gaps = 41/740 (5%)
Query: 41 AIAQYTVDARLHAVFEQSGESGKS---FDYSQSVRTMSHSVPEQQISAYLSKIQRGGHIQ 97
A+A TVDA+LHA FE+SG S S + ++ ++ +AYL +Q+G IQ
Sbjct: 22 AMALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQ 81
Query: 98 PFGCTIAVDEATFRVIAYSENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLL 157
PFGC +A+DE T +VIAYSENA EML + +VP++ L IGTD++TLFT+ S+ L
Sbjct: 82 PFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASAL 141
Query: 158 EKAFGAREITLLNPIWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 217
+KA G E+ LLNP+ IH K +GKPFYAI+HRV ++ID EP + + ++ AGA+QS
Sbjct: 142 QKALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSY 201
Query: 218 KLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDL 277
KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FHED+HGEV+AE +P L
Sbjct: 202 KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGL 261
Query: 278 EPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPH 337
EPY GLHYPATDIPQASRFLF +N+VRMIVDCHA + V+QDE L L L GSTLRAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPH 321
Query: 338 GCHAQYMANMGSIASLALAVIINGNDE----EAVGGRSTTRLWA---------------- 377
CHAQYMANM SIASL +AV++N N+E +A+ + RLW
Sbjct: 322 SCHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPL 381
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F + +N E++L Q+ EK++LRTQTLLCD+++RD+P GIV++SP+IMDLV
Sbjct: 382 RYACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLV 441
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAAL Y+ K + LGVTP+E+QI++I WL YH DSTG STDSL+DAG+P A +LGD
Sbjct: 442 KCDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGD 501
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
VCGMA +T +D +FWFRSHTA EI+WGGAKH +KDDG+RMHPRSSFK FL+VVK+
Sbjct: 502 VVCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKA 561
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDLELQGVDELSSVAREM 605
RSLPW E+DA+HSLQLILR++F+D E+ N+KA +N +L DL+++G+ EL +V E+
Sbjct: 562 RSLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKA-INTRLSDLKIEGMQELEAVTSEI 620
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETAT PI AVDV G VNGWN K+AELTGL V EAMGK L+ LV + V +L
Sbjct: 621 VRLIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKML 679
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLV 725
+ AL GEE+KNV+ +++T G++ + +VVNAC+S+D +N+VGVCFV D+T QK V
Sbjct: 680 NLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNV 739
Query: 726 MDKFIHIQGD----YKAIVH 741
MDKF I+GD Y+ +H
Sbjct: 740 MDKFTRIEGDTRQLYRTAIH 759
>gi|363547631|gb|AEW26858.1| phytochrome P [Ceratozamia fuscoviridis]
Length = 568
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/581 (69%), Positives = 461/581 (79%), Gaps = 39/581 (6%)
Query: 117 ENAGEMLGLAPQSVPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHS 176
ENA ML LAPQSVP +EK E LTIGTDVRTLFT SS++ LEKA A+EI+L NPI + S
Sbjct: 1 ENAAGMLDLAPQSVPTMEK-EFLTIGTDVRTLFTPSSAMSLEKAAAAQEISLANPISMQS 59
Query: 177 KNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIK 236
+++GK FYAI+HR+DVG+VID EP D ALS+AGAVQSQKLAVRAIS+LQ+LP GDI
Sbjct: 60 RSSGKAFYAIVHRIDVGMVIDFEP--LGDAALSVAGAVQSQKLAVRAISRLQALPAGDIG 117
Query: 237 LLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRF 296
+LCD+VV+ VR+LTGYDRVMVYRFHEDEHGEV+AE +R DLEPY GLHYPATDIPQASRF
Sbjct: 118 MLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRSDLEPYLGLHYPATDIPQASRF 177
Query: 297 LFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALA 356
LF QNRVRMI DC + P+ V+Q L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +A
Sbjct: 178 LFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMA 237
Query: 357 VIINGNDEEAVGGRSTTRLW--------------------------AFGLQLNMELQLAS 390
V++N N T+LW AFGLQLNMELQLA+
Sbjct: 238 VVVNAN----------TKLWGLVVCHHTSPRTVPFPVRCACEFLMQAFGLQLNMELQLAA 287
Query: 391 QLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTET 450
Q +EK +L+TQTLLCDMLLRD+P GIVTQ+PSIMDLV+CDGAAL Y G + LGV P E
Sbjct: 288 QATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCYGGTVWALGVAPAEA 347
Query: 451 QIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHT 510
QIKDI +WLL HGD TGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWFRS T
Sbjct: 348 QIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFLFWFRSQT 407
Query: 511 AKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDS 570
AKEIKWGG KHHP+D+DDG+RMHPRSSFKAFLEVVK RS PW+NAEMDAIHSLQLILR S
Sbjct: 408 AKEIKWGGEKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAEMDAIHSLQLILRGS 467
Query: 571 FRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNA 630
F D + + +K +V+++L DL +Q ++ELSSVA EMVRLIETATAPI AVD G VNGWNA
Sbjct: 468 FEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAPILAVDSRGLVNGWNA 527
Query: 631 KVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
K+AELTGL V EA GKSLV DLVY++ E V+ LL +A +G
Sbjct: 528 KIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNASRG 568
>gi|15425967|gb|AAK97634.1| phytochrome C [Hordeum vulgare]
Length = 830
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/815 (50%), Positives = 547/815 (67%), Gaps = 45/815 (5%)
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGNDE--------EAVGGRSTTRLWA-------- 377
RAPHGCHAQYMANMGSIASL ++V +N +D+ + GR +LW
Sbjct: 1 RAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGR---KLWGLVVCHHTS 57
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FG+QLN E++LASQ E+H+LRTQTLLCDMLL D+P GI TQ
Sbjct: 58 PRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLGDAPVGIFTQ 117
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SP++MDLVKCDGAAL YQ + LG P+E +IK I WLL H STGLSTDSL +AGY
Sbjct: 118 SPNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGY 177
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD-GQRMHPRSSF 538
P A+ LG+ VCGMA I+ + F+FWFRSHTAKEIKW GAKH P D DD G+RMHPRSSF
Sbjct: 178 PGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSF 237
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVVNAQLVDL-ELQGV 595
+AFLEVVK RS+PW++ EMDAIHSLQLILR S +D +A+ N ++V A D+ ++QG+
Sbjct: 238 RAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVGSIVEAPSDDVRKIQGL 297
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL V EMVRLIETATAPI AVD+ G +NGWN KVAE+TGL EA+G LV DLV
Sbjct: 298 LELRVVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLV-DLVEG 356
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
+ E++ +L+ A++G E++N EIKL+TF + V ++VNAC S+D ++ +VGVCFV
Sbjct: 357 DSVEVIKQMLNSAMQGTEEQNFEIKLKTFHQQEGNGPVVLMVNACCSRDLSDKVVGVCFV 416
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRG 775
QD+T K+VMDK+ IQGDY AIV +PN LIPPIF ++ C EWN AM+K+TG R
Sbjct: 417 AQDLTGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKRE 476
Query: 776 DIIGKMLVGEVF---GSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQA 832
D I K+L+GEVF CR+K +TK I ++ GQ+ EK F F +GKY+++
Sbjct: 477 DAIDKLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMES 536
Query: 833 LLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPL 892
LLTANKR + EG+I GA CFL + SPELQ AL VQ+ E+ KEL YI QE+KNPL
Sbjct: 537 LLTANKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPL 596
Query: 893 SGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLG 952
+G+ FT LLE +DLTE+Q+QL ++ C++Q+ KI+ D DLE IE +E EF L
Sbjct: 597 NGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEFNLE 656
Query: 953 SVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAE 1012
+N V+ Q M L +E+ + L RD P E+ ++ +YGD R+QQVLAD+L ++++ AE
Sbjct: 657 EALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDDLRLQQVLADYLACTLQFTRPAE 716
Query: 1013 GWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCR 1072
G + + V P + G I H EFR+V P G+P L+Q+MF +++EGLGL + +
Sbjct: 717 GPIVLQVIPKKEHIGSGMQIAHLEFRVVHPAPGVPEALIQEMFRHGPGVSREGLGLHISQ 776
Query: 1073 KILKLMNGEVQYIRESERCYFLIIFELPMPRRGSK 1107
K++K M+G VQY+RE+E F+++ E P+ + SK
Sbjct: 777 KLVKTMSGTVQYLREAESSSFIVLVEFPVAQLNSK 811
>gi|406685279|gb|AFS51080.1| phytochrome P, partial [Pseudotaxus chienii]
Length = 548
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/533 (72%), Positives = 435/533 (81%), Gaps = 34/533 (6%)
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
+V SQ+LAVRA S+LQ +P GDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 16 SVPSQRLAVRATSRLQEVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVAEI 75
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L QPLCLVGST
Sbjct: 76 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAEELKQPLCLVGST 135
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIING--------NDEEAVGGRSTTRLWA------- 377
LRAPHGCHAQYMANMGSIASL +AVI+NG + GRS+ +LW
Sbjct: 136 LRAPHGCHAQYMANMGSIASLVMAVIVNGIGNGNDEDGGGGSGSGRSSMKLWGLVVCHHT 195
Query: 378 -------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
FGLQ+NMELQLA+QL E ++LRTQTLLCDMLLRD+P GIVT
Sbjct: 196 SPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRTQTLLCDMLLRDAPIGIVT 255
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSPSIM+LVKCDGAALYY G + LGVTP E QIKDI EWLL HGDSTGLSTDSLADAG
Sbjct: 256 QSPSIMNLVKCDGAALYYGGMCWLLGVTPMEAQIKDITEWLLECHGDSTGLSTDSLADAG 315
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSF
Sbjct: 316 YPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSF 375
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K + +A+L DL+LQG+DEL
Sbjct: 376 KAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMAHARLNDLKLQGIDEL 435
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL+V EAMGKSLVHDLV+ E
Sbjct: 436 SSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLTVGEAMGKSLVHDLVFDESV 495
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E V+ +L+HA++GEE+KNVEIKLRTFG + +KK +++VVNACSS+DYT+NIVG
Sbjct: 496 ETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNACSSRDYTDNIVG 548
>gi|406685407|gb|AFS51144.1| phytochrome P, partial [Sequoia sempervirens]
Length = 531
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/514 (73%), Positives = 429/514 (83%), Gaps = 28/514 (5%)
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
A+ SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 18 AMPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEI 77
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A+P+ VIQ E L QPLCLVGST
Sbjct: 78 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGST 137
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA------------- 377
LRAPHGCH+QYMANMGSIASL +AVI+NGN DEE GRS+ +LW
Sbjct: 138 LRAPHGCHSQYMANMGSIASLVMAVIVNGNGNDEEGASGRSSVKLWGLVVCHHTSPRAVS 197
Query: 378 -------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIM 424
FGLQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIM
Sbjct: 198 FPLRSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIM 257
Query: 425 DLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAAT 484
DLVKCDGAALYY GK++ LGVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+
Sbjct: 258 DLVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAAS 317
Query: 485 LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 544
LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEV
Sbjct: 318 LGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEV 377
Query: 545 VKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVARE 604
VK RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+LQG+DELSSVA E
Sbjct: 378 VKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSHTKTMVHARLNDLKLQGIDELSSVASE 437
Query: 605 MVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNL 664
MVRLIETATAPI AVD G VNGWNAKVAELTGL V EAMGKSLVHDLV++E E V+ +
Sbjct: 438 MVRLIETATAPILAVDSGGIVNGWNAKVAELTGLPVSEAMGKSLVHDLVFEESMETVEKM 497
Query: 665 LHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
L+HAL+GEE+KNVEIKLRTFG +K ++++ N
Sbjct: 498 LYHALRGEEEKNVEIKLRTFGPXKQKMVIYLIAN 531
>gi|406685409|gb|AFS51145.1| phytochrome P, partial [Sequoiadendron giganteum]
Length = 531
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/511 (73%), Positives = 427/511 (83%), Gaps = 28/511 (5%)
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A+P+ VIQ E L QPLCLVGSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGSTLRA 140
Query: 336 PHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA---------------- 377
PHGCHAQYMANMGSIASLA+AVI+NGN DEE GRS+ +LW
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGNGNDEEGASGRSSVKLWGLVVCHHTSPRAVPFPL 200
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
FGLQ+NMELQLA+QL+E ++LRTQTLLCDMLLRD+P GIV+QSPSIMDLV
Sbjct: 201 RSACEFLMQTFGLQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLV 260
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYY GK++ LGVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP A +LGD
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGATSLGD 320
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHP+DKDD +RMHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTVKEMKWGGAKHHPDDKDDSRRMHPRSSFKAFLEVVKR 380
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+LQG+DELSSVA EMVR
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDELSSVASEMVR 440
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
LIETATAPI AVD G VNGWNAKVAELTGL V EAMGKSLVHDLV++E E V+ +LHH
Sbjct: 441 LIETATAPILAVDSGGIVNGWNAKVAELTGLPVAEAMGKSLVHDLVFEESMETVEKMLHH 500
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
AL+GEE+KNVEIKLRTFG + +K ++++VN
Sbjct: 501 ALRGEEEKNVEIKLRTFGPQKQKMVIYLIVN 531
>gi|406685297|gb|AFS51089.1| phytochrome P, partial [Taxus wallichiana]
Length = 543
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/533 (72%), Positives = 435/533 (81%), Gaps = 32/533 (6%)
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
G+V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEVVA
Sbjct: 11 GGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVA 70
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
E +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVG
Sbjct: 71 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSGELKQPLCLVG 130
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG------RSTTRLWA------- 377
STLRAPHGCHAQYMANMGSIASL +AVI+NGN RS+ +LW
Sbjct: 131 STLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGGGSGRSSMKLWGLVVCHHT 190
Query: 378 -------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
FGLQ+NMELQLA+QL E ++LRTQTLLCDMLLRD+P GIVT
Sbjct: 191 SPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRTQTLLCDMLLRDAPIGIVT 250
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSPSIMDLVKCDGAALYY G + LGVTP E QIKDI EWLL HGDSTGLSTDSLADAG
Sbjct: 251 QSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLLECHGDSTGLSTDSLADAG 310
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSF
Sbjct: 311 YPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSF 370
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK RSLPW+N EMDAIHSL+LILR SF+D + S++K +V+A+L DL+LQG+DEL
Sbjct: 371 KAFLEVVKRRSLPWENVEMDAIHSLRLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDEL 430
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL V EAMGKSLVHDLV+ E
Sbjct: 431 SSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPVGEAMGKSLVHDLVFDESV 490
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E V+ +L+HA++GEE+KNVEIKLRTFG + +KK +++VVNACSS+DYT+NIVG
Sbjct: 491 ETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNACSSRDYTDNIVG 543
>gi|406685299|gb|AFS51090.1| phytochrome P, partial [Torreya californica]
Length = 548
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/532 (72%), Positives = 434/532 (81%), Gaps = 34/532 (6%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQS+P GDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 17 VPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 76
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ V Q E L QPLCLVGSTL
Sbjct: 77 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVKQAEELKQPLCLVGSTL 136
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTT------RLWA-------- 377
RAPHGCHAQYMANMGSIASL +AVI+NGN DE+ V G + +LW
Sbjct: 137 RAPHGCHAQYMANMGSIASLVMAVIVNGNGIDEDGVSGSGSGSGRSSIKLWGLVVCHHTS 196
Query: 378 ------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQ 419
FGLQ+NMELQLA+QL E +LRTQTLLCDMLLRD+P GIVTQ
Sbjct: 197 PRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENSILRTQTLLCDMLLRDAPIGIVTQ 256
Query: 420 SPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGY 479
SPSIMDLVKCDGAALYY G ++ LGVTP E Q+KDI +WLL HGDSTGLSTDSLADAGY
Sbjct: 257 SPSIMDLVKCDGAALYYGGMFWLLGVTPIEAQLKDIADWLLECHGDSTGLSTDSLADAGY 316
Query: 480 PKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 539
P AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFK
Sbjct: 317 PGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFK 376
Query: 540 AFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELS 599
AFLEVVK RS PW+N EMDAIHSLQLILR SF+D + S +K +V+A+L DL+LQG+DELS
Sbjct: 377 AFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLKLQGIDELS 436
Query: 600 SVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEE 659
SVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL V EAMGKSLVHDLV++E E
Sbjct: 437 SVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPVGEAMGKSLVHDLVFEESIE 496
Query: 660 IVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
V+ +L+HAL+GEE+KNVEIKLRTFG + +KK +++VVNACSS+DYT+ IVG
Sbjct: 497 TVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIYLVVNACSSRDYTDKIVG 548
>gi|406685285|gb|AFS51083.1| phytochrome P, partial [Taxus wallichiana var. chinensis]
Length = 543
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/533 (72%), Positives = 435/533 (81%), Gaps = 32/533 (6%)
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
G+V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEVVA
Sbjct: 11 GGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVA 70
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
E +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVG
Sbjct: 71 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSGELKQPLCLVG 130
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG------RSTTRLWA------- 377
STLRAPHGCHAQYMANMGSIASL +AVI+NGN RS+ +LW
Sbjct: 131 STLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGGGSGRSSMKLWGLVVCHHT 190
Query: 378 -------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
FGLQ+NMELQLA+QL E ++LRTQTLLCDMLLRD+P GIVT
Sbjct: 191 SPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRTQTLLCDMLLRDAPIGIVT 250
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSPSIMDLVKCDGAALYY G + LGVTP E QIKDI EWLL HGDSTGLSTDSLADAG
Sbjct: 251 QSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLLECHGDSTGLSTDSLADAG 310
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSF
Sbjct: 311 YPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSF 370
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+LQG+DEL
Sbjct: 371 KAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDEL 430
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL V EAMGKSLVHDLV+ E
Sbjct: 431 SSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPVGEAMGKSLVHDLVFDESV 490
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E V+ +L+HA++GEE+KNVEIKLRTFG + +KK +++VVNACSS+DYT++IVG
Sbjct: 491 ETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNACSSRDYTDSIVG 543
>gi|406685295|gb|AFS51088.1| phytochrome P, partial [Taxus sumatrana]
Length = 543
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/533 (72%), Positives = 433/533 (81%), Gaps = 32/533 (6%)
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
G+V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEVVA
Sbjct: 11 GGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVA 70
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
E +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVG
Sbjct: 71 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSGELKQPLCLVG 130
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG------RSTTRLWA------- 377
STLRAPHGCHAQYMANMGSIASL +AVI+NGN RS+ +LW
Sbjct: 131 STLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGGGSGRSSMKLWGLVVCHHT 190
Query: 378 -------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVT 418
FGLQ+NMELQLA QL E ++LRTQTLLCDMLLRD+P GIVT
Sbjct: 191 SPRAVPFPLRSACEFLMQTFGLQINMELQLAVQLIENNILRTQTLLCDMLLRDAPIGIVT 250
Query: 419 QSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAG 478
QSPSIMDLVKCDGAALYY G + LGVTP E QIKDI EWLL HGDSTGLSTDSLAD G
Sbjct: 251 QSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLLECHGDSTGLSTDSLADTG 310
Query: 479 YPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 538
YP AA+LGDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSF
Sbjct: 311 YPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSF 370
Query: 539 KAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDEL 598
KAFLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+LQG+DEL
Sbjct: 371 KAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDEL 430
Query: 599 SSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYE 658
SSVA EMVRLIETATAPI AVD G VNGWNAKV ELTGL V EAMGKSLVHDLV+ E
Sbjct: 431 SSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPVGEAMGKSLVHDLVFDESV 490
Query: 659 EIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
E V+ +L+HA++GEE+KNVEIKLRTFG + +KK +++VVNACSS+DYT+NIVG
Sbjct: 491 ETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNACSSRDYTDNIVG 543
>gi|406685345|gb|AFS51113.1| phytochrome P, partial [Cunninghamia lanceolata]
Length = 531
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/511 (73%), Positives = 426/511 (83%), Gaps = 28/511 (5%)
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGYDRVMVY+ HEDEHGEVVAE +R
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDTVVEEVRELTGYDRVMVYKLHEDEHGEVVAEIRRS 80
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVSVIQSVELKQPLCLVGSTLRA 140
Query: 336 PHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA---------------- 377
PHGCHAQYMANMGSIASL +AVI+NGN DEE GRS+ +LW
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGGSGRSSVKLWGLVVCHHTSPRAVPFPL 200
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
FGLQ+NMELQLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFGLQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYY G+++ LGVTPTE QIKDI +WLL YH DSTGLSTDSLADAGYP AA+LGD
Sbjct: 261 KCDGAALYYGGRFWLLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGD 320
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDD +RMHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 380
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+++L DL+LQG+DELSSVA EMVR
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHSRLNDLKLQGIDELSSVASEMVR 440
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
LIETATAPI AVD G VNGWNAKVAELTGL V EAMGKSLVHDLV++E E V+ +L+H
Sbjct: 441 LIETATAPILAVDSSGTVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLYH 500
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
AL+GEEDKNVEIKLRTFG + +K +++VVN
Sbjct: 501 ALRGEEDKNVEIKLRTFGPQKQKMVIYLVVN 531
>gi|406685303|gb|AFS51092.1| phytochrome P, partial [Torreya jackii]
Length = 554
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/554 (70%), Positives = 440/554 (79%), Gaps = 42/554 (7%)
Query: 200 PARTEDPALSIAGA--------VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTG 251
P R D A ++ A V SQ+LAVRA S+LQS+P GDI LLCDTVVE VR+LTG
Sbjct: 1 PVRRGDAAALVSWAGGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELTG 60
Query: 252 YDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHA 311
YDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A
Sbjct: 61 YDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRA 120
Query: 312 TPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGG 369
TP+ V Q E L QPLCLVGSTLRAPHGCHAQYMANMGSIASL +AVI+NGN DE+ V G
Sbjct: 121 TPVKVKQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGIDEDGVSG 180
Query: 370 RSTT------RLWA--------------------------FGLQLNMELQLASQLSEKHV 397
+ +LW FGLQ+NMELQLA+QL E +
Sbjct: 181 SGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENSI 240
Query: 398 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVE 457
LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G ++ LGVTPTE Q+KDI +
Sbjct: 241 LRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLKDIAD 300
Query: 458 WLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 517
WLL HGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT +DFLFWF SHTAKE+KWG
Sbjct: 301 WLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFGSHTAKEMKWG 360
Query: 518 GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS 577
GAKHHP+DKDDG+RMHPRSSFKAFLEVVK RS PW+N EMDAIHSLQLILR SF+D + S
Sbjct: 361 GAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIDDS 420
Query: 578 NSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTG 637
+K +V+A+L DL+LQG+DELSSVA EMVRLIETATAPI AVD G VNGWN KV ELTG
Sbjct: 421 GTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNVKVGELTG 480
Query: 638 LSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVV 697
L V EAMGKSLVHDLV++E E V+ +L+HAL+GEE+KNVEIKLRTFG + +KK +++VV
Sbjct: 481 LPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIYLVV 540
Query: 698 NACSSKDYTNNIVG 711
NACSS+DYT+ IVG
Sbjct: 541 NACSSRDYTDKIVG 554
>gi|406685413|gb|AFS51147.1| phytochrome P, partial [Taxodium distichum]
Length = 531
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/511 (73%), Positives = 422/511 (82%), Gaps = 28/511 (5%)
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A P+ VIQ E L QPLCLVGSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRANPVRVIQAEELKQPLCLVGSTLRA 140
Query: 336 PHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA---------------- 377
PHGCHAQYMANMGSIASL +AVI+NGN DEE GRS +LW
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGSSGRSAVKLWGLVVCHHTSPRAVPFPL 200
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
FGLQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYY GK++ LGVTPT QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LGD
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDD +RMHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 380
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+ QL DL+LQG+DELSSVA EMVR
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMVHVQLHDLKLQGIDELSSVASEMVR 440
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
LIETAT PI AVD G VNGWNAK AELTGL V EAMGKSLVHDLV++E E V+ +L+H
Sbjct: 441 LIETATVPILAVDSAGIVNGWNAKAAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLYH 500
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
AL+GEEDKNVEIKLRTFG + +KK +++VVN
Sbjct: 501 ALRGEEDKNVEIKLRTFGPQRQKKVIYLVVN 531
>gi|406685341|gb|AFS51111.1| phytochrome P, partial [Cryptomeria japonica]
Length = 529
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/513 (73%), Positives = 424/513 (82%), Gaps = 30/513 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QNRVR+I DC A P+ VIQ E L QPLCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRVICDCRANPVGVIQVEELKQPLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA-------------- 377
RAPHGCHAQYMANMGSIASL +AVI+NGN DEE GR +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGSSGR--VKLWGLVVCHHTSPRAVPF 196
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
FGLQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMD
Sbjct: 197 PLRSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 256
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAALYY GK++ LGVTPT QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+L
Sbjct: 257 LVKCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASL 316
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVV
Sbjct: 317 GDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 376
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+ QL DL+LQG+DELSSVA EM
Sbjct: 377 KRRSLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMVHVQLHDLKLQGIDELSSVANEM 436
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAPI AVD G VNGWNAK AELTGL V EAMGKSLVHDLV++E E V+ +L
Sbjct: 437 VRLIETATAPILAVDSAGIVNGWNAKAAELTGLPVGEAMGKSLVHDLVFEESMETVEKML 496
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
+HAL+GEED+NVEIKLRTFG + +KK +++VVN
Sbjct: 497 YHALRGEEDRNVEIKLRTFGPQRQKKVIYLVVN 529
>gi|406685367|gb|AFS51124.1| phytochrome P, partial [Glyptostrobus pensilis]
Length = 531
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/511 (73%), Positives = 419/511 (81%), Gaps = 28/511 (5%)
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHG VVAE +R
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGGVVAEIRRS 80
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A P+ VIQ E L QPLCLVGSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRANPVRVIQAEELKQPLCLVGSTLRA 140
Query: 336 PHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA---------------- 377
PHGCHAQYMANMGSIASL +AVI+NGN DEE GRS +LW
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGSSGRSAVKLWGLVVCHHTSPRAVPFPL 200
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
FGLQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYY GK++ LGVTPT QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LGD
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDD +RMHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 380
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPW+N EMD IHSLQLILR SF+D + S +K +V+ QL DL+LQG+DELSSVA EMVR
Sbjct: 381 RSLPWENVEMDTIHSLQLILRGSFQDIDDSETKTMVHVQLHDLKLQGIDELSSVASEMVR 440
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
LIETAT PI AVD G VNGWNAK AELTGL EAMGKSLVHDLV++E E V+ +L+H
Sbjct: 441 LIETATVPILAVDSAGIVNGWNAKAAELTGLPAGEAMGKSLVHDLVFEESMETVEKMLYH 500
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
AL+GEEDKNVEIKLRTFG + +KK +++VVN
Sbjct: 501 ALRGEEDKNVEIKLRTFGPQRQKKGIYLVVN 531
>gi|1125697|gb|AAC49127.1| phytochrome, partial [Mesotaenium caldariorum]
gi|1587952|prf||2207374A phytochrome photoreceptor
Length = 577
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/576 (64%), Positives = 451/576 (78%), Gaps = 13/576 (2%)
Query: 378 FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQ 437
FGLQLNME++L+SQL EKH+LRTQTLLCDMLLRD+P GIV+QSP+I DLVKCDGAAL+Y
Sbjct: 2 FGLQLNMEVELSSQLREKHILRTQTLLCDMLLRDAPMGIVSQSPNITDLVKCDGAALFYH 61
Query: 438 GKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYI 497
G+ + LGVTP+E Q++DI WLL H DSTGLSTDSLADAGYP A +LG +VCGMA A I
Sbjct: 62 GRAWLLGVTPSEAQVRDIAAWLLDSHKDSTGLSTDSLADAGYPNADSLGVSVCGMAAARI 121
Query: 498 TKRDFLFWFRSHTAKEIKWGGAKHHPEDKD-----DGQRMHPRSSFKAFLEVVKSRSLPW 552
T +DFLFWFRSH KE+KW GAK P D+D +G RMHPRSSF+AFLEVVK RSLPW
Sbjct: 122 TSKDFLFWFRSHAQKEVKWAGAKQEPGDRDREEGEEGGRMHPRSSFQAFLEVVKQRSLPW 181
Query: 553 DNAEMDAIHSLQLILRDSFRD------AEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
++ EMDAIHSLQLILR SF+D +K ++NA+L DL+LQG+DELS+VA EMV
Sbjct: 182 EDVEMDAIHSLQLILRGSFQDMEGEGGGSQQGNKRMINARLNDLKLQGMDELSTVANEMV 241
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
RLIETATAPI AVD GCVNGWNAKV+ELTGL V EAMGKSLV DLV +E E V+ +L+
Sbjct: 242 RLIETATAPILAVDSLGCVNGWNAKVSELTGLPVSEAMGKSLVKDLVQRESREAVERVLY 301
Query: 667 HALKGEEDKNVEIKLRTFGAE--NRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKL 724
AL GEE++NVEI+L+T+G + + V +VVNAC+S+D + ++VGVCFVGQDVT +K
Sbjct: 302 MALNGEEEQNVEIQLKTWGPQLHSHGGTVILVVNACASRDVSESVVGVCFVGQDVTGEKE 361
Query: 725 VMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVG 784
V+DKFI IQGDY IV S N LIPPIF SDE CC+EWN AMEKLTG R D+IG+ML G
Sbjct: 362 VLDKFIRIQGDYTTIVRSRNSLIPPIFGSDEYGCCTEWNPAMEKLTGVRREDVIGRMLTG 421
Query: 785 EVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEG 844
+VFGS RL+G D LT+FMI L+ A G DT+KFPF +DR GK V +LLTANKR + +G
Sbjct: 422 DVFGSALRLRGSDGLTQFMIVLNRAMDGADTDKFPFTFYDREGKCVDSLLTANKRTDADG 481
Query: 845 QIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEA 904
I G FCFL S ELQQAL+VQ+ E+ A+ KELAYI QEI+NPL G+ F S +E
Sbjct: 482 AITGVFCFLHTVSLELQQALSVQKAAERVAEAKAKELAYIRQEIQNPLDGIHFARSFIEH 541
Query: 905 TDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDG 940
T+L+EDQKQL+ETSA CEKQ+ +I+ D+DLESIE+G
Sbjct: 542 TELSEDQKQLMETSATCEKQLRRILDDMDLESIEEG 577
>gi|4038606|emb|CAA05296.1| phytochrome B1 [Solanum lycopersicum]
Length = 493
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/450 (79%), Positives = 406/450 (90%), Gaps = 2/450 (0%)
Query: 662 DNLLHHALK--GEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDV 719
D LH + G E KNVEIKLRTFGAE +KAVF+VVNACSS+DYTN+IVGV FVGQDV
Sbjct: 43 DARLHAVFEQSGVEGKNVEIKLRTFGAEQVEKAVFLVVNACSSRDYTNSIVGVSFVGQDV 102
Query: 720 TDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIG 779
T +K+VMDKFIHIQGDYKAIVHSPNPLIPPIFASDENT CSEWNTAMEKL+GWSR +I+G
Sbjct: 103 TGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTSCSEWNTAMEKLSGWSREEIVG 162
Query: 780 KMLVGEVFGSCCRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKR 839
KMLVGE+FGSCCRLKGPDA+TKFMI LHNA GGQDT+KFPF FDRNGKYVQALLTANKR
Sbjct: 163 KMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRNGKYVQALLTANKR 222
Query: 840 VNMEGQIVGAFCFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTN 899
VNMEG +GAFCF+QIASPELQQAL VQRQQEKKC++++KELAYICQE+K+PL+G+ FTN
Sbjct: 223 VNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQEVKSPLNGIRFTN 282
Query: 900 SLLEATDLTEDQKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVV 959
SLLEAT+LTE QKQ LETSAACE+QM KII+DVDLE+IEDGSL EK +F LGSVI+AVV
Sbjct: 283 SLLEATNLTEYQKQYLETSAACERQMSKIIRDVDLENIEDGSLTLEKEDFFLGSVIDAVV 342
Query: 960 SQVMMLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHV 1019
SQVM+LLRE+ +QLIRDIPEEIKTL V+GDQ RIQQVLADFLLNMVRY+PS +GWVEI +
Sbjct: 343 SQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVRYAPSPDGWVEIQL 402
Query: 1020 RPTLKQSSEGQTIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMN 1079
RP++ S+G T+VH E R++CPGEGLPPELVQDMFHSSRW+TQEGLGLSMCRK+LKLMN
Sbjct: 403 RPSMMPISDGATVVHIELRIICPGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKMLKLMN 462
Query: 1080 GEVQYIRESERCYFLIIFELPMPRRGSKSI 1109
GE+QYIRESERCYF+II +LPM R+G KS+
Sbjct: 463 GEIQYIRESERCYFMIILDLPMTRKGPKSV 492
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 7/67 (10%)
Query: 1 MASNSQHQQQ-HRRSQSAAQSSGTSNIRAHHNATESMTVSKAIAQYTVDARLHAVFEQSG 59
MAS S+ + H SQ AQSSGTSN+ N +S +SKAIAQYT DARLHAVFEQSG
Sbjct: 1 MASGSRTKHSYHNSSQGQAQSSGTSNM----NYKDS--ISKAIAQYTADARLHAVFEQSG 54
Query: 60 ESGKSFD 66
GK+ +
Sbjct: 55 VEGKNVE 61
>gi|4038602|emb|CAA05294.1| phytochrome B1 [Solanum lycopersicum]
Length = 462
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/439 (80%), Positives = 402/439 (91%)
Query: 671 GEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFI 730
G E KNVEIKLRTFGAE +KAVF+VVNACSS+DYTN+IVGV FVGQDVT +K+VMDKFI
Sbjct: 23 GVEGKNVEIKLRTFGAEQVEKAVFLVVNACSSRDYTNSIVGVSFVGQDVTGEKIVMDKFI 82
Query: 731 HIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSC 790
HIQGDYKAIVHSPNPLIPPIFASDENT CSEWNTAMEKL+GWSR +I+GKMLVGE+FGSC
Sbjct: 83 HIQGDYKAIVHSPNPLIPPIFASDENTSCSEWNTAMEKLSGWSREEIVGKMLVGEIFGSC 142
Query: 791 CRLKGPDALTKFMIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAF 850
CRLKGPDA+TKFMI LHNA GGQDT+KFPF FDRNGKYVQALLTANKRVNMEG +GAF
Sbjct: 143 CRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAF 202
Query: 851 CFLQIASPELQQALTVQRQQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTED 910
CF+QIASPELQQAL VQRQQEKKC++++KELAYICQE+K+PL+G+ FTNSLLEAT+LTE
Sbjct: 203 CFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQEVKSPLNGIRFTNSLLEATNLTEY 262
Query: 911 QKQLLETSAACEKQMLKIIKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERN 970
QKQ LETSAACE+QM KII+DVDLE+IEDGSL EK +F LGSVI+AVVSQVM+LLRE+
Sbjct: 263 QKQYLETSAACERQMSKIIRDVDLENIEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKG 322
Query: 971 LQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQ 1030
+QLIRDIPEEIKTL V+GDQ RIQQVLADFLLNMVRY+PS +GWVEI +RP++ S+G
Sbjct: 323 VQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVRYAPSPDGWVEIQLRPSMMPISDGA 382
Query: 1031 TIVHNEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESER 1090
T+VH E R++CPGEGLPPELVQDMFHSSRW+TQEGLGLSMCRK+LKLMNGE+QYIRESER
Sbjct: 383 TVVHIELRIICPGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKMLKLMNGEIQYIRESER 442
Query: 1091 CYFLIIFELPMPRRGSKSI 1109
CYF+II +LPM R+G KS+
Sbjct: 443 CYFMIILDLPMTRKGPKSV 461
>gi|406685395|gb|AFS51138.1| phytochrome P, partial [Metasequoia glyptostroboides]
Length = 531
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/511 (73%), Positives = 425/511 (83%), Gaps = 28/511 (5%)
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 21 SQRLAVRATSRLQAVPSGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A+P+ VIQ E L QPLCLVGSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGSTLRA 140
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVGG--RSTTRLWA---------------- 377
PHGCHAQYMANMGSIASL +AVI+NGN GG RS+ +LW
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNGEEGGSGRSSVKLWGLVVCHHTSPRAVPFPL 200
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
FGLQ+NMELQLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFGLQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYY GK++ LGVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LGD
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDD +RMHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 380
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL LQG+DELSSVA EMVR
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLRLQGIDELSSVASEMVR 440
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
LIETATAPI AVD G VNGWNAKVAELTGL V EAMGKSLVHDLV++E E V+ +L+H
Sbjct: 441 LIETATAPILAVDSGGIVNGWNAKVAELTGLPVAEAMGKSLVHDLVFEESMETVEKMLYH 500
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVVVN 698
AL+GEE+KNVEIKLRTFG + +K +++VVN
Sbjct: 501 ALRGEEEKNVEIKLRTFGPQKQKMVIYLVVN 531
>gi|406685269|gb|AFS51075.1| phytochrome P, partial [Austrotaxus spicata]
Length = 546
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/531 (71%), Positives = 426/531 (80%), Gaps = 32/531 (6%)
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
+V SQ+LAVRA S+LQ++ GDI LLCDTVVE VR+LTGYDRVMVY FHEDEHGEVVAE
Sbjct: 16 SVPSQRLAVRATSRLQAVSSGDIGLLCDTVVEEVRELTGYDRVMVYEFHEDEHGEVVAEI 75
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L QPLCLVGST
Sbjct: 76 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAEELKQPLCLVGST 135
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTTR------LWA--------- 377
LRAPHGCHAQYMANMGSIASL +AVI+NGN LW
Sbjct: 136 LRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGGGSGRSSRRLWGLVVCHHTSP 195
Query: 378 -----------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQS 420
FGLQ+NMELQLA+QL E ++LRTQTLLCDMLLRD+P GIVTQS
Sbjct: 196 RAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRTQTLLCDMLLRDAPIGIVTQS 255
Query: 421 PSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYP 480
PSIMDLVKCDGA LYY G + LGVTP E QIKDI +WLL HGDSTGLSTDSLADAGYP
Sbjct: 256 PSIMDLVKCDGACLYYGGMCWLLGVTPMEAQIKDIADWLLECHGDSTGLSTDSLADAGYP 315
Query: 481 KAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 540
AA+LGDAVCGMA A IT +DFLFWFRS+TAKE+KWGGAKHHP+DKDDG+RMHPRSSFKA
Sbjct: 316 GAASLGDAVCGMAAARITSKDFLFWFRSNTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKA 375
Query: 541 FLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSS 600
FLEVVK RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+A+L DL+LQG+DELSS
Sbjct: 376 FLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSHTKTMVHARLNDLKLQGIDELSS 435
Query: 601 VAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEI 660
VA EMVRLIETATAPI AVD G +NGWNAKV ELTGL V EAMGKSLVHDLV E E
Sbjct: 436 VASEMVRLIETATAPILAVDCSGIINGWNAKVGELTGLPVGEAMGKSLVHDLVLNESIET 495
Query: 661 VDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
V+ +L+HAL+GEE+KNVEIKLRTFG + KK +++VVNACSS+DYT+NIVG
Sbjct: 496 VEKMLYHALRGEEEKNVEIKLRTFGPQKXKKVIYLVVNACSSRDYTDNIVG 546
>gi|156752885|gb|ABU94188.1| phytochrome N [Pinus pinaster]
Length = 612
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/610 (61%), Positives = 456/610 (74%), Gaps = 34/610 (5%)
Query: 296 FLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAL 355
FLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMGSIASL +
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 356 AVIIN----GNDEEAVGGRSTTRLWA--------------------------FGLQLNME 385
AV+IN D E + RLW FG+QLN E
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+G ++ LG
Sbjct: 121 VELAAQMREKRILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEGNFWLLGA 180
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I +DFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 566 ILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCV 625
ILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI AVD +G V
Sbjct: 301 ILRGSCKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 626 NGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFG 685
NGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 686 AENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNP 745
+E K V ++VNACSS+D N+VGVCFV QDVT QK VMDKF IQGDY+AIV +P+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKTVMDKFTRIQGDYRAIVQNPSP 479
Query: 746 LIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKF 802
LIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG +ALT+
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 803 MIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQ 862
I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL IASPELQQ
Sbjct: 540 RIILNSSMAGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 863 ALTVQRQQEK 872
AL VQ E+
Sbjct: 600 ALYVQHMLEQ 609
>gi|156752825|gb|ABU94158.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/610 (61%), Positives = 457/610 (74%), Gaps = 34/610 (5%)
Query: 296 FLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAL 355
FLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMGSIASL +
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 356 AVIIN----GNDEEAVGGRSTTRLWA--------------------------FGLQLNME 385
AV+IN D E + RLW FG+QLN E
Sbjct: 61 AVVINEKKLDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+ ++ LGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I +DFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 566 ILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCV 625
ILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI AVD +G V
Sbjct: 301 ILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 626 NGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFG 685
NGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 686 AENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNP 745
+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+AIV +P+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSP 479
Query: 746 LIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKF 802
LIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG +ALT+
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 803 MIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQ 862
I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL IASPELQQ
Sbjct: 540 RIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 863 ALTVQRQQEK 872
AL VQ E+
Sbjct: 600 ALYVQHMLEQ 609
>gi|156752811|gb|ABU94151.1| phytochrome N [Pinus sylvestris]
gi|156752813|gb|ABU94152.1| phytochrome N [Pinus sylvestris]
gi|156752815|gb|ABU94153.1| phytochrome N [Pinus sylvestris]
gi|156752817|gb|ABU94154.1| phytochrome N [Pinus sylvestris]
gi|156752819|gb|ABU94155.1| phytochrome N [Pinus sylvestris]
gi|156752821|gb|ABU94156.1| phytochrome N [Pinus sylvestris]
gi|156752823|gb|ABU94157.1| phytochrome N [Pinus sylvestris]
gi|156752827|gb|ABU94159.1| phytochrome N [Pinus sylvestris]
gi|156752829|gb|ABU94160.1| phytochrome N [Pinus sylvestris]
gi|156752831|gb|ABU94161.1| phytochrome N [Pinus sylvestris]
gi|156752833|gb|ABU94162.1| phytochrome N [Pinus sylvestris]
gi|156752835|gb|ABU94163.1| phytochrome N [Pinus sylvestris]
gi|156752837|gb|ABU94164.1| phytochrome N [Pinus sylvestris]
gi|156752839|gb|ABU94165.1| phytochrome N [Pinus sylvestris]
gi|156752841|gb|ABU94166.1| phytochrome N [Pinus sylvestris]
gi|156752843|gb|ABU94167.1| phytochrome N [Pinus sylvestris]
gi|156752845|gb|ABU94168.1| phytochrome N [Pinus sylvestris]
gi|156752847|gb|ABU94169.1| phytochrome N [Pinus sylvestris]
gi|156752851|gb|ABU94171.1| phytochrome N [Pinus sylvestris]
gi|156752855|gb|ABU94173.1| phytochrome N [Pinus sylvestris]
gi|156752857|gb|ABU94174.1| phytochrome N [Pinus sylvestris]
gi|156752859|gb|ABU94175.1| phytochrome N [Pinus sylvestris]
gi|156752861|gb|ABU94176.1| phytochrome N [Pinus sylvestris]
gi|156752863|gb|ABU94177.1| phytochrome N [Pinus sylvestris]
gi|156752867|gb|ABU94179.1| phytochrome N [Pinus sylvestris]
gi|156752871|gb|ABU94181.1| phytochrome N [Pinus sylvestris]
gi|156752873|gb|ABU94182.1| phytochrome N [Pinus sylvestris]
gi|156752875|gb|ABU94183.1| phytochrome N [Pinus sylvestris]
gi|156752877|gb|ABU94184.1| phytochrome N [Pinus sylvestris]
gi|156752883|gb|ABU94187.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/610 (61%), Positives = 457/610 (74%), Gaps = 34/610 (5%)
Query: 296 FLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAL 355
FLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMGSIASL +
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 356 AVIIN----GNDEEAVGGRSTTRLWA--------------------------FGLQLNME 385
AV+IN D E + RLW FG+QLN E
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+ ++ LGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I +DFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 566 ILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCV 625
ILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI AVD +G V
Sbjct: 301 ILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 626 NGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFG 685
NGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 686 AENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNP 745
+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+AIV +P+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSP 479
Query: 746 LIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKF 802
LIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG +ALT+
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 803 MIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQ 862
I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL IASPELQQ
Sbjct: 540 RIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 863 ALTVQRQQEK 872
AL VQ E+
Sbjct: 600 ALYVQHMLEQ 609
>gi|156752853|gb|ABU94172.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/610 (61%), Positives = 457/610 (74%), Gaps = 34/610 (5%)
Query: 296 FLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAL 355
FLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMGSIASL +
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 356 AVIIN----GNDEEAVGGRSTTRLWA--------------------------FGLQLNME 385
AV+IN D E + RLW FG+QLN E
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+ ++ LG+
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGI 180
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I +DFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 566 ILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCV 625
ILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI AVD +G V
Sbjct: 301 ILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 626 NGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFG 685
NGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 686 AENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNP 745
+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+AIV +P+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSP 479
Query: 746 LIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKF 802
LIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG +ALT+
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 803 MIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQ 862
I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL IASPELQQ
Sbjct: 540 RIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 863 ALTVQRQQEK 872
AL VQ E+
Sbjct: 600 ALYVQHMLEQ 609
>gi|156752869|gb|ABU94180.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/610 (61%), Positives = 456/610 (74%), Gaps = 34/610 (5%)
Query: 296 FLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAL 355
FLF +NRVRMI DC+A P+ VIQDE L + L GSTLRAPHGCHAQYMANMGSIASL +
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 356 AVIIN----GNDEEAVGGRSTTRLWA--------------------------FGLQLNME 385
AV+IN D E + RLW FG+QLN E
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+ ++ LGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I +DFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 566 ILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCV 625
ILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI AVD +G V
Sbjct: 301 ILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 626 NGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFG 685
NGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 686 AENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNP 745
+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+AIV +P+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSP 479
Query: 746 LIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKF 802
LIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG +ALT+
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 803 MIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQ 862
I L+++ GQ TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL IASPELQQ
Sbjct: 540 RIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 863 ALTVQRQQEK 872
AL VQ E+
Sbjct: 600 ALYVQHMLEQ 609
>gi|156752809|gb|ABU94150.1| phytochrome N [Pinus sylvestris]
gi|156752849|gb|ABU94170.1| phytochrome N [Pinus sylvestris]
gi|156752865|gb|ABU94178.1| phytochrome N [Pinus sylvestris]
gi|156752879|gb|ABU94185.1| phytochrome N [Pinus sylvestris]
gi|156752881|gb|ABU94186.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/610 (61%), Positives = 456/610 (74%), Gaps = 34/610 (5%)
Query: 296 FLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAL 355
FLF +NRVRMI DC+A P+ VIQDE + L GSTLRAPHGCHAQYMANMGSIASL +
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 356 AVIIN----GNDEEAVGGRSTTRLWA--------------------------FGLQLNME 385
AV+IN D E + RLW FG+QLN E
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
++LA+Q+ EK +LRTQTLLCDMLLRD+P GIVTQ P+IMDLV+CDGAALYY+ ++ LGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TPTE QI+DIV WL +H DSTGLSTDSL AGYP A +LG+AVCG+A I +DFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTAKEIKWGGAKH +++DDG++MHPRSSF AFLEVVK RSL W++ EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 566 ILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCV 625
ILR S ++ + S +N QL DL+LQ +DEL++V EMVRLIETATAPI AVD +G V
Sbjct: 301 ILRGSRKETDGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGVV 360
Query: 626 NGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFG 685
NGWN K AELTGLSVEE +G+ L+ +LV + E V +LH AL+G E++NV+I+L+ G
Sbjct: 361 NGWNRKAAELTGLSVEEVLGEPLI-NLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 686 AENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNP 745
+E K V ++VNACSS+D N+VGVCFV QDVT QK+VMDKF IQGDY+AIV +P+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSP 479
Query: 746 LIPPIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGS---CCRLKGPDALTKF 802
LIPPIF +DE CSEWN+AMEKL+GW R +II KML+GEVFG+ CCRLKG +ALT+
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 803 MIALHNAFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQ 862
I L+++ GQ+TEKFPF FDR+GKYV+ LL+ANK+++ EG+I G FCFL IASPELQQ
Sbjct: 540 RIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 863 ALTVQRQQEK 872
AL VQ E+
Sbjct: 600 ALYVQHMLEQ 609
>gi|406685427|gb|AFS51154.1| phytochrome P, partial [Thujopsis dolabrata]
Length = 530
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/509 (72%), Positives = 416/509 (81%), Gaps = 28/509 (5%)
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L QPLCLVGSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAEELNQPLCLVGSTLRA 140
Query: 336 PHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA---------------- 377
PHGCHAQYMANMGSIASLA+AVI+NGN DE GRS +LW
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGNGKDEGGSSGRSAAKLWGLVVCHHTAPRAVPFPL 200
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIV QSPSIMDLV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVIQSPSIMDLV 260
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYY GK++ LGVTPT QIKDI +WLL Y GDSTGLSTDSLADAGYP AA+LGD
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYQGDSTGLSTDSLADAGYPGAASLGD 320
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AVCGMA A IT +DFLFWFRSHTA EIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A++ DL+LQG+DELSSVA EMVR
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDIDDSENKTMVHARMSDLKLQGMDELSSVACEMVR 440
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
LIETA API AVD G VNGWN+ AELTGL EEAMGKS VHDLV++E E V+ +L++
Sbjct: 441 LIETAHAPILAVDSAGIVNGWNSYAAELTGLPAEEAMGKSFVHDLVFEESIETVEKMLYN 500
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
AL+GEEDKNVEIKLRTFG E +K+ + VV
Sbjct: 501 ALRGEEDKNVEIKLRTFGLEMQKEVILVV 529
>gi|406685423|gb|AFS51152.1| phytochrome P, partial [Thuja standishii]
Length = 530
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/511 (72%), Positives = 416/511 (81%), Gaps = 28/511 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L QPLCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAEELKQPLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA-------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+NGN DE GRS +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGNGKDEGGSSGRSAVKLWGLVVCHHTSPRAVPF 198
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
F LQ+NME+QLA QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAVQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 258
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAALYY GK++ LGVTPT QIKDI +WLL Y GDSTGLSTDSLADAGYP AA+L
Sbjct: 259 LVKCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYQGDSTGLSTDSLADAGYPGAASL 318
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA A IT +DFLFWFRSHTA EIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A++ DL+LQG+DELSSVA EM
Sbjct: 379 KRRSLPWENIEMDAIHSLQLILRGSFQDIDNSENKTMVHARMSDLKLQGMDELSSVACEM 438
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETA API AVD G VNGWN+ AELTGL EEAMGKS VHDLV++E E V+ +L
Sbjct: 439 VRLIETAHAPILAVDSAGIVNGWNSYAAELTGLPAEEAMGKSFVHDLVFEESIETVEKML 498
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 499 DNALRGEEDKNVEIKLRTFGLQMQKEVILVV 529
>gi|406685425|gb|AFS51153.1| phytochrome P, partial [Thuja sutchuenensis]
Length = 530
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/511 (72%), Positives = 415/511 (81%), Gaps = 28/511 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L QPLCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAEELKQPLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA-------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+NGN DE GRS +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGNGKDEGGSSGRSAVKLWGLVVCHHTSPRAVPF 198
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
F LQ+NME+QLA QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAVQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 258
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAALYY GK++ LGVTPT QIKDI +WLL Y GDSTGLSTDSLADAGYP AA+L
Sbjct: 259 LVKCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYQGDSTGLSTDSLADAGYPGAASL 318
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA A IT +DFLFWFRSHTA EIKWGGAKHHP+DKDDG+RMHPRSSFKA LEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKASLEVV 378
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A++ DL+LQG+DELSSVA EM
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDIDNSENKTMVHARMSDLKLQGMDELSSVACEM 438
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETA API AVD G VNGWN+ AELTGL EEAMGKS VHDLV++E E V+ +L
Sbjct: 439 VRLIETAHAPILAVDSAGIVNGWNSYAAELTGLPAEEAMGKSFVHDLVFEESIETVEKML 498
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 499 DNALRGEEDKNVEIKLRTFGLQMQKEVILVV 529
>gi|406685365|gb|AFS51123.1| phytochrome P, partial [Fokienia hodginsii]
Length = 530
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/511 (72%), Positives = 418/511 (81%), Gaps = 28/511 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHED+HGEVVAE +
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDDHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC ATP+ +IQ E L QPLCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRATPVKIIQAEELDQPLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIING--NDEEAVGGRSTTRLWA-------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+NG NDE GRS +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGIGNDEGGSSGRSAGKLWGLVVCHHTSPRAVPF 198
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVT+SPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTRSPSIMD 258
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAALYY GK++ L VTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+L
Sbjct: 259 LVKCDGAALYYGGKFWLLEVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASL 318
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA A IT +DFLFWFRSHTA EIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A++ DL LQG+DELSSVA EM
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDIDDSENKTMVHARMSDLRLQGMDELSSVACEM 438
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETA API AVD G VNGWN+ AELTGL EEAMGKSLVHDLV+ E E V+ +L
Sbjct: 439 VRLIETAHAPILAVDAAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFDESIETVEKML 498
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
++AL+GEEDK+VEIKLRTFG + +K+ + VV
Sbjct: 499 YNALRGEEDKSVEIKLRTFGPQMQKEVILVV 529
>gi|406685421|gb|AFS51151.1| phytochrome P, partial [Thuja plicata]
Length = 530
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/511 (72%), Positives = 414/511 (81%), Gaps = 28/511 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DL PY GLHYPATDIPQASRFLF QNRVRMI DC ATP+ VIQ E L QPLCLVGSTL
Sbjct: 79 RSDLGPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAEELKQPLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA-------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+NGN DE GRS +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGNGKDEGGSSGRSAVKLWGLVVCHHTSPRAVPF 198
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
F LQ+NME+QLA QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAVQLAENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 258
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAALYY GK++ LGVTPT QIKDI +WLL Y GDSTGLSTDSLADAGYP AA+L
Sbjct: 259 LVKCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYQGDSTGLSTDSLADAGYPGAASL 318
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA A IT +DFLFWFRSHTA EIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+A++ DL+LQG+D LSSVA EM
Sbjct: 379 KRRSLPWDNVEMDAIHSLQLILRGSFQDIDNSENKTMVHARMSDLKLQGMDGLSSVACEM 438
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETA API AVD G VNGWN+ AELTGL EEAMGKS VHDLV++E E V+ +L
Sbjct: 439 VRLIETAHAPILAVDSAGIVNGWNSYAAELTGLPAEEAMGKSFVHDLVFEESIETVEKML 498
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 499 DNALRGEEDKNVEIKLRTFGLQMQKEVILVV 529
>gi|406685419|gb|AFS51150.1| phytochrome P, partial [Thuja occidentalis]
Length = 530
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/512 (71%), Positives = 417/512 (81%), Gaps = 28/512 (5%)
Query: 213 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAES 272
+V SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 18 SVPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEI 77
Query: 273 KRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGST 332
+R DLEPY GLHYPATDIPQASRFLF QNRVR+I DC ATP+ VIQ E L QPLCLVGST
Sbjct: 78 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRVICDCRATPVRVIQAEELKQPLCLVGST 137
Query: 333 LRAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA------------- 377
LRAPHGCHAQYMANMGSIASLA+AVI+NGN DE GRS +LW
Sbjct: 138 LRAPHGCHAQYMANMGSIASLAMAVIVNGNGKDEGGSSGRSAVKLWGLVVCHHTSPRAVP 197
Query: 378 -------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIM 424
F LQ+NME+QLA QL+E ++LRTQTLLCDMLLRD+P GIV+QSPSIM
Sbjct: 198 FPLRSACEFLMQTFSLQINMEMQLAVQLTENNILRTQTLLCDMLLRDAPIGIVSQSPSIM 257
Query: 425 DLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAAT 484
DLVKCDGAALYY GK++ LGVTPT QIKDI +WLL Y GDSTGLSTDSLADAGYP AA+
Sbjct: 258 DLVKCDGAALYYGGKFWMLGVTPTGAQIKDIADWLLEYQGDSTGLSTDSLADAGYPGAAS 317
Query: 485 LGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 544
L DA+CGMA A IT +DFLFWFRSHTA EIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEV
Sbjct: 318 LRDAICGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEV 377
Query: 545 VKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVARE 604
VK RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A++ DL+LQG+DELSSVA E
Sbjct: 378 VKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSENKTMVHARMSDLKLQGMDELSSVACE 437
Query: 605 MVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNL 664
MVRLIETA API AVD G VNGWN+ AELTGL EEAMGKSLVHDLV++E E V+ +
Sbjct: 438 MVRLIETAHAPILAVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFEESIETVEKM 497
Query: 665 LHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
L +AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 LDNALRGEEDKNVEIKLRTFGLQMQKEVILVV 529
>gi|406685411|gb|AFS51146.1| phytochrome P, partial [Taiwania cryptomerioides]
Length = 509
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/491 (74%), Positives = 410/491 (83%), Gaps = 28/491 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQ++P GDI LLCDTVVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QNRVRMI DC A+P+ VIQ E L QPLCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTRLWA-------------- 377
RAPHGCHAQYMANMGSIASL +AVI+NGN DEE GRS+ +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGGSGRSSVKLWGLVVCHHTSPRAVSF 198
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
FG Q+NMELQLA+QL+E ++LRTQTLLCDMLLRD+P GI TQSPSIMD
Sbjct: 199 PLRSACEFLMQTFGPQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIATQSPSIMD 258
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAALYY GK++ LGVTPTE QIKDI +WLL YH DSTGLSTDSLADAGYP AA+L
Sbjct: 259 LVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASL 318
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPW+N EMDAIHSLQLILR SF+D + S++K +V+++L DL+LQG+DELSSVA EM
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHSRLNDLKLQGIDELSSVASEM 438
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETATAPI A+D G VNGWNAKVAELTGL V EAMGKSLVHDLV++E E V+ +L
Sbjct: 439 VRLIETATAPILAIDSAGIVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESMETVEKML 498
Query: 666 HHALKGEEDKN 676
+HAL+GEEDKN
Sbjct: 499 YHALRGEEDKN 509
>gi|406685339|gb|AFS51110.1| phytochrome P, partial [Chamaecyparis obtusa]
Length = 530
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/511 (71%), Positives = 416/511 (81%), Gaps = 28/511 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+F ED+HGEVVAE +
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFREDDHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC A P+ +IQ E L QPLCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRAPPVRIIQAEELDQPLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIING--NDEEAVGGRSTTRLWA-------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+NG NDE GRS +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGIGNDEGGSSGRSAGKLWGLVVCHHTSPRAVPF 198
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVT+SPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTRSPSIMD 258
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAALYY GK++ L VTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+L
Sbjct: 259 LVKCDGAALYYGGKFWLLEVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASL 318
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA A IT +DFLFWFRSHT KEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTGKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A++ DL LQG+DELSSVA EM
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDIDDSENKTMVHARMSDLRLQGMDELSSVACEM 438
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETA API AVD G VNGWN+ AELTGL EEAMGKSLVHDLV+ E E V+ +L
Sbjct: 439 VRLIETAHAPILAVDAAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFDESIETVEKML 498
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
++AL+GEEDK+VEIKLRTFG + +K+ + VV
Sbjct: 499 YNALRGEEDKSVEIKLRTFGPQMQKEVILVV 529
>gi|37779202|gb|AAO86643.1| PHYA2 photoreceptor [Stellaria longipes]
Length = 935
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/764 (51%), Positives = 510/764 (66%), Gaps = 58/764 (7%)
Query: 16 SAAQSSGTSNI-RAHHNATESMTVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSVRTM 74
S AQS ++N R+ H+A + IAQ DA+LHA FE ES FDYS SVR
Sbjct: 3 SPAQSQNSTNSGRSKHSA-------RIIAQTIQDAKLHAEFE---ESSNEFDYSSSVRGS 52
Query: 75 SHSV-----PEQQISAYLSKIQRGGHIQPFGCTIAVDEATFRVIAYSENAGEMLGLAPQS 129
+ V ++ S+YL +IQ+G IQPFGC +A+D+ TFRVIA+SENA EML + +
Sbjct: 53 TSGVNQLPKSDKVTSSYLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHA 112
Query: 130 VPNLEKQEILTIGTDVRTLFTSSSSVLLEKAFGAREITLLNPIWIHSKNTGKPFYAILHR 189
VP++ ++ IGTD+RT+FT S+ L+KA G +++LLNPI +H KN GKPFYAI+HR
Sbjct: 113 VPSVGDLPVIGIGTDIRTIFTGPSASALQKALGFTDVSLLNPILVHCKNPGKPFYAIVHR 172
Query: 190 VDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQL 249
V +VID EP + + ++ AGA+QS KLA +AI++LQSLP G++ L DT+V+ V +L
Sbjct: 173 VTRSLVIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFEL 232
Query: 250 TGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDC 309
TGYDRVM Y+FH+D+HGEVV+E +P+L+ Y GLHYPATDIPQA+RFLF +N+VR+I DC
Sbjct: 233 TGYDRVMAYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDC 292
Query: 310 HATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG 369
A + V+QDE L L L GSTLRAPHGCHAQYM NM SI SL +AV++N D+E G
Sbjct: 293 RAKNVRVVQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGS 352
Query: 370 -----RSTTRLWA--------------------------FGLQLNMELQLASQLSEKHVL 398
RLW F + +N EL+L +Q EK +L
Sbjct: 353 APAQPHKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKIL 412
Query: 399 RTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEW 458
RTQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y K + LG+TPT+ Q+++I W
Sbjct: 413 RTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYNNKVWRLGITPTDYQLQEIGGW 472
Query: 459 LLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGG 518
L H DSTGLSTDSL DAGYP A LGD+VCGMA IT D LFWFRSHTA EIKWGG
Sbjct: 473 LSRDHMDSTGLSTDSLYDAGYPAALELGDSVCGMAAVRITVNDMLFWFRSHTAAEIKWGG 532
Query: 519 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN 578
AKH +KDDG +MHPRSSFKAFLEVVK RS+PW + EMDAIHSLQLILR++F+D EA++
Sbjct: 533 AKHEAGEKDDGSKMHPRSSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDGEAAD 592
Query: 579 -SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTG 637
+ +V+++++ DL++ G+ EL +V EMVRLIETAT PIFAVD G VNGWN K+ ELTG
Sbjct: 593 LNTSVIHSKISDLQISGLKELEAVTSEMVRLIETATVPIFAVDSDGLVNGWNTKIYELTG 652
Query: 638 LSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALK-GEEDKNVEIKLRTFGAENRKKAVFVV 696
+ VEEA+GK + LV + V +L AL+ D + ++ + K V+
Sbjct: 653 IPVEEAVGKHIAA-LVEDSSIDNVKQMLQSALQLASHDLQHALHIQRLAEQAATKRANVL 711
Query: 697 VNACSSKDYTNNIVGVCFVGQ--DVTD----QKLVMDKFIHIQG 734
A + N + G+ F G+ D T+ Q+LV+ QG
Sbjct: 712 --AYMKRRIKNPLAGIIFSGKILDGTNVDEKQRLVLQTSARCQG 753
Score = 166 bits (419), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 184/358 (51%), Gaps = 52/358 (14%)
Query: 749 PIFASDENTCCSEWNTAMEKLTGWSRGDIIGKMLVGEVFGSCCRLKGPDALTKFMIALHN 808
PIFA D + + WNT + +LTG
Sbjct: 630 PIFAVDSDGLVNGWNTKIYELTG------------------------------------- 652
Query: 809 AFGGQDTEKFPFPLFDRNGKYVQALLTANKRVNMEGQIVGAFCFLQIASPELQQALTVQR 868
P+ + GK++ AL+ + N++ + A LQ+AS +LQ AL +QR
Sbjct: 653 -----------IPVEEAVGKHIAALVEDSSIDNVKQMLQSA---LQLASHDLQHALHIQR 698
Query: 869 QQEKKCFARLKELAYICQEIKNPLSGVSFTNSLLEATDLTEDQKQLLETSAACEKQMLKI 928
E+ R LAY+ + IKNPL+G+ F+ +L+ T++ E Q+ +L+TSA C+ Q+ KI
Sbjct: 699 LAEQAATKRANVLAYMKRRIKNPLAGIIFSGKILDGTNVDEKQRLVLQTSARCQGQLNKI 758
Query: 929 IKDVDLESIEDGSLEFEKAEFLLGSVINAVVSQVMMLLRERNLQLIRDIPEEIKTLAVYG 988
+ D DL+SI DG E E EF + ++ A +SQVM E+ +Q+ + E +YG
Sbjct: 759 LDDSDLDSIIDGYCELEMVEFAVQDILVASISQVMAKSSEKGIQMSNNCTEHGFKETLYG 818
Query: 989 DQARIQQVLADFLLNMVRYSPSAEGWVEIHVRPTLKQSSEGQTIVHNEFRMVCPGEGLPP 1048
D R+QQ+LADFL V ++ S G + + VR T + E + + EFR+ G G+
Sbjct: 819 DSLRLQQILADFLSISVNFT-SPGGHIGVTVRLTKDKIGESVQLANLEFRITHTGGGISE 877
Query: 1049 ELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIIFELPMPRRGS 1106
EL+ +MF S +++G+ L + RK++KLMNG++QY+R + F+I EL + S
Sbjct: 878 ELLSEMFESRGNASEDGISLLISRKLVKLMNGDIQYLRSAGTSTFIISVELAVAGNSS 935
>gi|406685417|gb|AFS51149.1| phytochrome P, partial [Tetraclinis articulata]
Length = 530
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/511 (70%), Positives = 414/511 (81%), Gaps = 28/511 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L QPLCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMICDCRAAPVSIIQAEELPQPLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN--GNDEEAVGGRSTTRLWA-------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNANGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPF 198
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
F LQ+NME+Q+A+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQMAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 258
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAALYY GK++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADA YP AA+L
Sbjct: 259 LVKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADARYPGAASL 318
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSF+AFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFQAFLEVV 378
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RS PWDN EMDAIHSLQLILR SF+D + +K +V+AQ+ DL+LQG+DEL+S A EM
Sbjct: 379 KRRSFPWDNVEMDAIHSLQLILRGSFKDIDDCENKTMVHAQMNDLKLQGMDELNSAACEM 438
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VR+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDL+ +E E V +L
Sbjct: 439 VRVIETAHAPILGVDSDGIVNGWNSYAAELTGLPAEEAMGKSLVHDLIVEESIETVAKML 498
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
++AL+GEEDKNVEIKLRTF + +K+ + VV
Sbjct: 499 YNALRGEEDKNVEIKLRTFAPQTQKEVILVV 529
>gi|406685355|gb|AFS51118.1| phytochrome P, partial [Callitropsis funebris]
Length = 528
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/510 (72%), Positives = 415/510 (81%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEV+AE +
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY GK++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K VV+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTVVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESVETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685351|gb|AFS51116.1| phytochrome P, partial [Cupressus duclouxiana]
gi|406685359|gb|AFS51120.1| phytochrome P, partial [Cupressus torulosa]
Length = 528
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/510 (72%), Positives = 415/510 (81%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEV+AE +
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY GK++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K VV+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTVVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESVETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685319|gb|AFS51100.1| phytochrome P, partial [Hesperocyparis bakeri]
gi|406685323|gb|AFS51102.1| phytochrome P, partial [Hesperocyparis goveniana]
gi|406685327|gb|AFS51104.1| phytochrome P, partial [Hesperocyparis macrocarpa]
Length = 528
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/513 (71%), Positives = 417/513 (81%), Gaps = 28/513 (5%)
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
GAV SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEV+A
Sbjct: 16 GGAVPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLA 75
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
E +R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVG
Sbjct: 76 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVG 135
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA------------ 377
STLRAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 136 STLRAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAV 195
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSI
Sbjct: 196 PFPLRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSI 255
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAALYY GK++ +G+TPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA
Sbjct: 256 MDLVKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAA 315
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
LGDAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG++MHPRSSFKAFLE
Sbjct: 316 FLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRKMHPRSSFKAFLE 375
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
VVK RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A
Sbjct: 376 VVKRRSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTMVHAQMNDLKLQG-DELNSAAC 434
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVR+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V
Sbjct: 435 EMVRVIETAHAPILGVDSTGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAK 494
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+L++AL+GEEDKNVEIKLRTFG++ +K+ + VV
Sbjct: 495 MLYNALRGEEDKNVEIKLRTFGSQMQKEIILVV 527
>gi|406685397|gb|AFS51139.1| phytochrome P, partial [Microbiota decussata]
Length = 529
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/511 (71%), Positives = 417/511 (81%), Gaps = 29/511 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMICDCRAAPVSIIQAEELPQRLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLWA-------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+NGN + VG GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGNVNDEVGSSGRNTGKLWGLVVCHHTSPRAVPF 198
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
F LQ+NME+QLA+QL+E+H+LRTQTLLCDMLLRD+P GIVTQSPSIM+
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAAQLTEQHILRTQTLLCDMLLRDAPIGIVTQSPSIMN 258
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAALYY GK++ +GVTPTE QIKDI +WLL YH DSTGLSTDSLADAGYP AA+L
Sbjct: 259 LVKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASL 318
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EM
Sbjct: 379 KRRSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTMVHAQMNDLKLQG-DELNSAACEM 437
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VR+IETA API VD G VNGWN+ AELTGL EEAMGKSL+HDLV +E E V +L
Sbjct: 438 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLLHDLVLEESIETVAKML 497
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
++AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 YNALRGEEDKNVEIKLRTFGPQMQKEVILVV 528
>gi|406685405|gb|AFS51143.1| phytochrome P, partial [Platycladus orientalis]
Length = 529
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/509 (71%), Positives = 415/509 (81%), Gaps = 29/509 (5%)
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNKVRMICDCRAAPVSIIQAEELSQSLCLVGSTLRA 140
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLWA---------------- 377
PHGCHAQYMANMGSIASLA+AVI+NGN + VG GR+T +LW
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGNVNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFPL 200
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F LQ+NME+QLA+QL+E+H+LRTQTLLCDMLLRD+P GIVTQSPSIM+LV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTEQHILRTQTLLCDMLLRDAPIGIVTQSPSIMNLV 260
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYY GK++ +GVTPTE QIKDI +WLL YH DSTGLSTDSLADAGYP AA+LGD
Sbjct: 261 KCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGD 320
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AVCG A A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 321 AVCGRAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMVR
Sbjct: 381 RSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTMVHAQMNDLKLQG-DELNSAACEMVR 439
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L++
Sbjct: 440 VIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESFETVAKMLYN 499
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 500 ALRGEEDKNVEIKLRTFGPQTQKEVILVV 528
>gi|406685357|gb|AFS51119.1| phytochrome P, partial [Cupressus sempervirens]
Length = 528
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/510 (71%), Positives = 414/510 (81%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVM Y+FHEDEHGEV+AE +
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMAYKFHEDEHGEVLAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY GK++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K VV+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTVVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESVETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685337|gb|AFS51109.1| phytochrome P, partial [Chamaecyparis lawsoniana]
Length = 530
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/511 (71%), Positives = 415/511 (81%), Gaps = 28/511 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHED+HGEVVAE +
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDDHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF +NRVRMI DC A P+ +IQ E L QPLCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRAPPVRIIQAEELDQPLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIING--NDEEAVGGRSTTRLWA-------------- 377
RAPHG HAQYMANMGSIASLA+AVI+NG NDE GRS +LW
Sbjct: 139 RAPHGYHAQYMANMGSIASLAMAVIVNGIGNDEGGSSGRSAGKLWGLVVCHHTSPRAVPF 198
Query: 378 ------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 425
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVT+SPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTRSPSIMD 258
Query: 426 LVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATL 485
LVKCDGAALYY GK++ L VTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+L
Sbjct: 259 LVKCDGAALYYGGKFWLLEVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASL 318
Query: 486 GDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 545
GDAVCGMA A IT +DFLFWFRSHTA EIKWGGAKHHP+DKDDG+RMHPRSSF AFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFXAFLEVV 378
Query: 546 KSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREM 605
K RSLPW+N EMDAIHSLQLILR SF+D + S +K +V+A++ DL LQG+DELSSVA EM
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDIDDSENKTMVHARMSDLRLQGMDELSSVACEM 438
Query: 606 VRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLL 665
VRLIETA API AVD G VNGWN+ AELTGL EEAMGKSLVHDLV+ E E V+ +L
Sbjct: 439 VRLIETAHAPILAVDAAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFDESIETVEKML 498
Query: 666 HHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
++AL+GEEDK+VEIKLRTFG + +K+ + VV
Sbjct: 499 YNALRGEEDKSVEIKLRTFGPQMQKEVILVV 529
>gi|406685321|gb|AFS51101.1| phytochrome P, partial [Hesperocyparis benthamii]
Length = 528
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/513 (71%), Positives = 417/513 (81%), Gaps = 28/513 (5%)
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
GA+ SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEV+A
Sbjct: 16 GGALPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLA 75
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
E +R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVG
Sbjct: 76 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVG 135
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA------------ 377
STLRAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 136 STLRAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAV 195
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSI
Sbjct: 196 PFPLRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSI 255
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAALYY GK++ +G+TPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA
Sbjct: 256 MDLVKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAA 315
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
LGDAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG++MHPRSSFKAFLE
Sbjct: 316 FLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRKMHPRSSFKAFLE 375
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
VVK RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A
Sbjct: 376 VVKRRSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTMVHAQMNDLKLQG-DELNSAAC 434
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVR+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V
Sbjct: 435 EMVRVIETAHAPILGVDSTGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAK 494
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+L++AL+GEEDKNVEIKLRTFG++ +K+ + VV
Sbjct: 495 MLYNALRGEEDKNVEIKLRTFGSQMQKEIILVV 527
>gi|406685335|gb|AFS51108.1| phytochrome P, partial [Calocedrus macrolepis]
Length = 529
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/509 (71%), Positives = 415/509 (81%), Gaps = 29/509 (5%)
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QN+VRMI DC P+ +IQ + L Q LCLVGSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRDAPVSIIQADELPQRLCLVGSTLRA 140
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLWA---------------- 377
PHGCHAQYMANMGSIASLA+AVI+NGN + VG GR+T +LW
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFPL 200
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYY GK++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LGD
Sbjct: 261 KCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMVR
Sbjct: 381 RSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTMVHAQMNDLKLQG-DELNSAACEMVR 439
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L++
Sbjct: 440 VIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLYN 499
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
AL+GEEDKNVE+KLRTFG + +K+ + VV
Sbjct: 500 ALRGEEDKNVEMKLRTFGPQMQKEVILVV 528
>gi|406685325|gb|AFS51103.1| phytochrome P, partial [Hesperocyparis lusitanica]
Length = 528
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/513 (71%), Positives = 416/513 (81%), Gaps = 28/513 (5%)
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
GAV SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEV+A
Sbjct: 16 GGAVPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLA 75
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
E +R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVG
Sbjct: 76 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVG 135
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA------------ 377
STLRAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 136 STLRAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAV 195
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
F LQ+NME+QLA+QL+E ++LRTQTLLCD LLRD+P GIVTQSPSI
Sbjct: 196 PFPLRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDTLLRDAPIGIVTQSPSI 255
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAALYY GK++ +G+TPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA
Sbjct: 256 MDLVKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAA 315
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
LGDAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG++MHPRSSFKAFLE
Sbjct: 316 FLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRKMHPRSSFKAFLE 375
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
VVK RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A
Sbjct: 376 VVKRRSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTMVHAQMNDLKLQG-DELNSAAC 434
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVR+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V
Sbjct: 435 EMVRVIETAHAPILGVDSTGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAK 494
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+L++AL+GEEDKNVEIKLRTFG++ +K+ + VV
Sbjct: 495 MLYNALRGEEDKNVEIKLRTFGSQMQKEIILVV 527
>gi|406685347|gb|AFS51114.1| phytochrome P, partial [Hesperocyparis arizonica]
Length = 528
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/513 (71%), Positives = 416/513 (81%), Gaps = 28/513 (5%)
Query: 211 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVA 270
GAV SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEV+A
Sbjct: 16 GGAVPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLA 75
Query: 271 ESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVG 330
E +R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVG
Sbjct: 76 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVG 135
Query: 331 STLRAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA------------ 377
STLRAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 136 STLRAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAV 195
Query: 378 --------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSI 423
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSI
Sbjct: 196 PFPLRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSI 255
Query: 424 MDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAA 483
MDLVKCDGAALYY GK++ +G+TPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA
Sbjct: 256 MDLVKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAA 315
Query: 484 TLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 543
LGDAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG++MHPRSSFKAFLE
Sbjct: 316 FLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRKMHPRSSFKAFLE 375
Query: 544 VVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAR 603
VVK RSLPWDN EM AIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A
Sbjct: 376 VVKRRSLPWDNVEMGAIHSLQLILRGSFKDIDDSENKTMVHAQMNDLKLQG-DELNSAAC 434
Query: 604 EMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDN 663
EMVR+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V
Sbjct: 435 EMVRVIETAHAPILGVDSTGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAK 494
Query: 664 LLHHALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+L++AL+GEEDKNVEIKLRTFG++ +K+ + VV
Sbjct: 495 MLYNALRGEEDKNVEIKLRTFGSQMQKEIILVV 527
>gi|406685375|gb|AFS51128.1| phytochrome P, partial [Juniperus drupacea]
Length = 528
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/510 (71%), Positives = 414/510 (81%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY K++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKNKTMVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685353|gb|AFS51117.1| phytochrome P, partial [Cupressus dupreziana]
Length = 528
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/510 (71%), Positives = 414/510 (81%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEV+AE +
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSI+DL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSILDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY GK++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGM A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMTAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K VV+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTVVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESVETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685387|gb|AFS51134.1| phytochrome P, partial [Juniperus virginiana]
Length = 528
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/510 (71%), Positives = 414/510 (81%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQK+AVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQKVAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY K++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKNKTMVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685331|gb|AFS51106.1| phytochrome P, partial [Callitropsis vietnamensis]
Length = 528
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/510 (71%), Positives = 415/510 (81%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEV+AE +
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY GK++ +G+TPTE QIKDI +WLL YHGDSTGLSTDS+ADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSIADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKNKTMVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E + +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETLAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEIILVV 527
>gi|406685369|gb|AFS51125.1| phytochrome P, partial [Juniperus ashei]
gi|406685371|gb|AFS51126.1| phytochrome P, partial [Juniperus coahuilensis]
Length = 528
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/510 (71%), Positives = 414/510 (81%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQK+AVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQKVAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L + LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPRLLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY K++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKNKTMVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685329|gb|AFS51105.1| phytochrome P, partial [Callitropsis nootkatensis]
Length = 528
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/510 (71%), Positives = 414/510 (81%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEV+AE +
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQ MANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQCMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY GK++ +G+TPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTMVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEIILVV 527
>gi|406685373|gb|AFS51127.1| phytochrome P, partial [Juniperus communis]
Length = 528
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/510 (71%), Positives = 414/510 (81%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD+VVE VR+LTGYDRVMVY+FHEDE GEVVAE +
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDSVVEEVRELTGYDRVMVYKFHEDERGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY K++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKNKTMVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|89331077|emb|CAJ80905.1| phytochrome A [Chelone obliqua]
Length = 615
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/616 (57%), Positives = 455/616 (73%), Gaps = 31/616 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ +LTGYDRVM+Y+FH+D+HGEV +E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEAFELTGYDRVMIYKFHDDDHGEVFSEVTKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + V+QDE L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRAKHVKVVQDEKLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDE---EAVGGRSTTRLWA--------------------------FGLQLNMELQLA 389
+N DE E+V + RLW F + +N EL+L
Sbjct: 181 VNEGDEDGSESVHPQKRKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 390 SQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE 449
+Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGAAL Y+ K Y +G+TPT+
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALMYKNKKYKMGLTPTD 300
Query: 450 TQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSH 509
QI+DIV WL YH DSTGLSTDSL DAG+P A LGDA+CGMA I++RD+LFWFRSH
Sbjct: 301 FQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKISERDWLFWFRSH 360
Query: 510 TAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRD 569
TA EI+WGGAKH +KDDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR+
Sbjct: 361 TAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 570 SFRDAEASNSKA-VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
+F+D E ++S ++ +L DL + G+ EL +V EMVRLIETA+ PI AVDV G VNGW
Sbjct: 421 AFKDGENADSDTKAIHTRLTDLRIDGMQELEAVTSEMVRLIETASVPILAVDVDGHVNGW 480
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
N+K+A+LTGL V+EA+GK + +LV + V +L AL+G+E++NV+ +++T G +
Sbjct: 481 NSKIADLTGLPVDEAIGKQFL-ELVEDSSTDTVSKMLKLALEGKEEQNVQFEVKTHGERS 539
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
V +VVNAC+SKD N+VGVCF+ QD+T K +MDKF I+GDYKAIV +PNPLIP
Sbjct: 540 DSGPVTLVVNACASKDVEENVVGVCFIAQDITAHKNMMDKFTRIEGDYKAIVQNPNPLIP 599
Query: 749 PIFASDENTCCSEWNT 764
PIF +DE CSEWN
Sbjct: 600 PIFGTDEFGWCSEWNN 615
>gi|406685379|gb|AFS51130.1| phytochrome P, partial [Juniperus phoenicea]
Length = 528
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/510 (71%), Positives = 412/510 (80%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASR LF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRLLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYM NMGSIASLA+A+I+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMDNMGSIASLAMAIIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY K++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKNKTMVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + VV
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|89330150|emb|CAJ80987.1| phytochrome A [Strobilanthes attenuata]
Length = 607
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/607 (57%), Positives = 454/607 (74%), Gaps = 31/607 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV G++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV +E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFSEVTKPGLEPYSGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + V+QDE L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRANHVNVVQDEKLTLDLTLCGSTLRAPHSCHLQYMENMISIASLVMSVV 180
Query: 359 INGNDEEAVGG---RSTTRLWA--------------------------FGLQLNMELQLA 389
+N DEEA RLW F + +N EL+L
Sbjct: 181 VNEGDEEASNSSQPEKRKRLWGLVVCHHSSPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 390 SQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE 449
+Q+ EK++LRTQTLLCDML+RD+P GIV+QSP++MDLVKCDGA L Y+GK Y LG++P +
Sbjct: 241 NQMLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKGKMYRLGLSPID 300
Query: 450 TQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSH 509
Q +DIV WL YH DSTGLSTDSL DAG+P A +LGDAVCGMA IT +D+LFWFRSH
Sbjct: 301 FQTRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLGDAVCGMAAVKITDKDWLFWFRSH 360
Query: 510 TAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRD 569
TA EI+WGGAKH P +KDDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR+
Sbjct: 361 TAAEIRWGGAKHEPSEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 570 SFRDAEASNSKA-VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
+F++AE N +A V++ +L DL++ G+ EL +V EMVRLIETA+ PI AVDV G VNGW
Sbjct: 421 AFKEAEGDNMEANVIHTRLSDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGW 480
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
N K+A+LTGL+V++A+G+ + LV + +IV +L AL+G+E++NV+ +++T G +
Sbjct: 481 NTKIADLTGLTVDKAIGRHFI-GLVEESSADIVSKMLELALQGKEERNVQFEIKTHGPGS 539
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ +VVNAC+S+D N+VGVCF+ QD+T QK +MDKF I+GDY+AIV +PNPLIP
Sbjct: 540 EAGPISLVVNACASRDVKENVVGVCFIAQDITAQKTMMDKFTKIEGDYRAIVQNPNPLIP 599
Query: 749 PIFASDE 755
PIF +DE
Sbjct: 600 PIFGTDE 606
>gi|406685333|gb|AFS51107.1| phytochrome P, partial [Calocedrus decurrens]
Length = 529
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/509 (71%), Positives = 413/509 (81%), Gaps = 29/509 (5%)
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QN+VRMI DC P+ +IQ + L Q LCLVGSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRDAPVGIIQADELPQRLCLVGSTLRA 140
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEEAVG--GRSTTRLWA---------------- 377
PHGCHAQYMANMGSIASLA+AVI+NGN + VG GR+T +LW
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFPL 200
Query: 378 ----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 427
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLR++P GIVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLREAPIGIVTQSPSIMDLV 260
Query: 428 KCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGD 487
KCDGAALYY GK++ + VTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LGD
Sbjct: 261 KCDGAALYYGGKFWLIRVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 488 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 547
AVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 548 RSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVR 607
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMVR
Sbjct: 381 RSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTMVHAQMNDLKLQG-DELNSAACEMVR 439
Query: 608 LIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHH 667
+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L++
Sbjct: 440 VIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLYN 499
Query: 668 ALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
AL GEEDKNVE+KLRTFG + +K+ + VV
Sbjct: 500 ALGGEEDKNVEMKLRTFGPQMQKEVILVV 528
>gi|406685385|gb|AFS51133.1| phytochrome P, partial [Juniperus tibetica]
Length = 528
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/510 (71%), Positives = 412/510 (80%), Gaps = 28/510 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQK+AVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQKVAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N G DE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGKDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY K++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKA LEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKASLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKNKTMVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 497
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVV 696
+AL+GEEDKNVEIKLRTFG + +K+ + +V
Sbjct: 498 NALRGEEDKNVEIKLRTFGPQMQKEVILIV 527
>gi|406685343|gb|AFS51112.1| phytochrome P, partial [Cunninghamia lanceolata var. konishii]
Length = 477
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/477 (74%), Positives = 396/477 (83%), Gaps = 28/477 (5%)
Query: 228 QSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPA 287
Q++P GDI LLCDTV E VR+LTGYDRVMVY+FHEDEHGEVVAE +R DLEPY GLHYPA
Sbjct: 1 QAVPNGDIGLLCDTVAEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPA 60
Query: 288 TDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANM 347
TDIPQASRFLF QNRVRMI DC ATP+ VIQ L QPLCLVGSTLRAPHGCHAQYMANM
Sbjct: 61 TDIPQASRFLFMQNRVRMICDCRATPVSVIQSVELKQPLCLVGSTLRAPHGCHAQYMANM 120
Query: 348 GSIASLALAVIINGN--DEEAVGGRSTTRLWA--------------------------FG 379
GSIASL +AVI+NGN DEE GRS+ +LW FG
Sbjct: 121 GSIASLVMAVIVNGNGNDEEGGSGRSSVKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFG 180
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQ+NMELQLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY G+
Sbjct: 181 LQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGR 240
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPTE QIKDI +WLL YH DSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 241 FWLLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 300
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DKDD +RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 301 KDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDA 360
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S++K +V+++L DL+LQG+DELSSVA EMVRLIETATAPI AV
Sbjct: 361 IHSLQLILRGSFQDIDDSDTKTMVHSRLNDLKLQGIDELSSVASEMVRLIETATAPILAV 420
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKN 676
D G VNGWNAKVAELTGL V EAMGKSLVHDLV++E E V +L+HAL+GEEDKN
Sbjct: 421 DSSGIVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESMETVGKMLYHALRGEEDKN 477
>gi|89331117|emb|CAJ80925.1| phytochrome A [Lamium purpureum]
Length = 608
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/608 (57%), Positives = 448/608 (73%), Gaps = 32/608 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G I+ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAINRLQSLPSGSIERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVMVY+FHED+HGEV E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMVYKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC AT + VIQD L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRATHVKVIQDGNLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRST----TRLWA--------------------------FGLQLNMELQL 388
+N DEE G S RLW F + +N E +L
Sbjct: 181 VNEGDEEGSGSDSPPEKRKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 240
Query: 389 ASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPT 448
SQ+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGAAL Y+GK Y LG+TPT
Sbjct: 241 ESQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKGKKYRLGMTPT 300
Query: 449 ETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRS 508
+ QI+D+V WL YH DSTGLSTDSL DAG+P A LGDA+CGMA IT +D+LFWFRS
Sbjct: 301 DFQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRS 360
Query: 509 HTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILR 568
HTA E++WGGAKH P +KDDG++MHPRSSFKAFLEVVK+RS+PW + EMDAIHSLQLILR
Sbjct: 361 HTASEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILR 420
Query: 569 DSFRDAEASNSKA-VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNG 627
++F+++ ++ +A ++ +L DL++ G+ EL +V EMVRLIETA+ PI AVDV G VNG
Sbjct: 421 NAFKESGGTDVEARAIHMKLSDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNG 480
Query: 628 WNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAE 687
WN K+A+LTGLSV++A+G+ + DLV V+ +L AL+G E+ NV+ +L+ G
Sbjct: 481 WNTKIADLTGLSVDKAIGRHFL-DLVEDSSAHTVNQMLKLALEGNEEHNVQFELKNHGEM 539
Query: 688 NRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLI 747
+ +VVNAC+S+D ++VGVCF+ QD+T QK +MDKF I+GDY+AIV +PNPLI
Sbjct: 540 TEAGPISLVVNACASRDVKESVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIVQNPNPLI 599
Query: 748 PPIFASDE 755
PPIF +DE
Sbjct: 600 PPIFGTDE 607
>gi|89331027|emb|CAJ80880.1| phytochrome A [Ajuga reptans]
Length = 608
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/610 (56%), Positives = 452/610 (74%), Gaps = 36/610 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV AE +PDLEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFAEVTKPDLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + V+QDE L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCKANHVKVVQDENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRSTT------RLWA--------------------------FGLQLNMEL 386
+N +EE GG +T RLW F + +N EL
Sbjct: 181 VNEGNEE--GGSESTHPEKRKRLWGLVVCHLTSPRFVPFPLRYACEFLAQVFAIHVNKEL 238
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
+L +Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGAAL Y+ K Y LG+T
Sbjct: 239 ELENQMMEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYKLGLT 298
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
PT+ QI+D+V WL YH DSTGLSTDSL DAG+P A LG AVCGMA I +D+LFWF
Sbjct: 299 PTDFQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGHAVCGMAAVKINDKDWLFWF 358
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTA EI+WGGAKH P +KDDG++MHPRSSF+AFLE VK+RSLPW + EMDAIHSLQLI
Sbjct: 359 RSHTASEIRWGGAKHEPGEKDDGRKMHPRSSFRAFLEAVKTRSLPWKDYEMDAIHSLQLI 418
Query: 567 LRDSFRDAEASNSKA-VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCV 625
LR++F++A+ ++ +++ +L DL++ G+ EL +V EMVRLIETA+ PI AVD G V
Sbjct: 419 LRNAFKEADDKDTDTKMIHTKLNDLQIDGIQELEAVTSEMVRLIETASVPILAVDADGLV 478
Query: 626 NGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFG 685
NGWN K+A+LT L V++A+G+ + DLV +IV ++L AL+G+E++NV+ +++T G
Sbjct: 479 NGWNTKIADLTSLPVDKAIGRHFL-DLVEDTSADIVSHMLQLALQGKEEQNVQFEIKTHG 537
Query: 686 AENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNP 745
+ V ++VNAC+S+D N+VGVCF+ QD+T QK +MDKF I+GDY+AI+ +PNP
Sbjct: 538 ENSESGPVTLIVNACASRDVKENVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIIQNPNP 597
Query: 746 LIPPIFASDE 755
LIPPIF +DE
Sbjct: 598 LIPPIFGTDE 607
>gi|89331107|emb|CAJ80920.1| phytochrome A [Glechoma hederacea]
Length = 607
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/609 (56%), Positives = 452/609 (74%), Gaps = 35/609 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQ+LP G I+ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSIERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+ + V +LTGYDRVM+Y+FHED+HGEV E ++P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMSQEVFELTGYDRVMIYKFHEDDHGEVFTEIRKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + V+QDE L L L GSTLRAPH CH QYM NM SIASL ++++
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLPLELTLCGSTLRAPHSCHLQYMENMNSIASLVMSIV 180
Query: 359 INGNDEEAVGGRST-----TRLWA--------------------------FGLQLNMELQ 387
+N +EE G ST RLW F + +N EL+
Sbjct: 181 VNEGEEE--GSDSTHPDKRKRLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELE 238
Query: 388 LASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTP 447
L +Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGAAL Y+ K Y LG+TP
Sbjct: 239 LENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYRLGMTP 298
Query: 448 TETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFR 507
+ QI+D+V WL YH DSTGLSTDSL DAG+P A LGDAVCGMA IT +D+LFWFR
Sbjct: 299 GDFQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFR 358
Query: 508 SHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLIL 567
SHTA E++WGGAKH P++KDDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLIL
Sbjct: 359 SHTAAEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 418
Query: 568 RDSFRDAEASNSKA-VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
R+S+++ E +++ A ++ +L DL+++G+ EL +V EMVRLIETA+ PI AVDV G VN
Sbjct: 419 RNSYKEDEDTDTYAKAIHTRLSDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVN 478
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GW K+A+LTGL V++A+G + LV + + V ++L ALKGEE++NV+ +++T G
Sbjct: 479 GWYTKIADLTGLPVDKAIGCHFL-SLVEESSADAVSSMLELALKGEEERNVQFEIKTHGE 537
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
+ + +VVNAC+S+D ++VGVCF+ QD+T QK +MDKF I+GDYKAIV +PNPL
Sbjct: 538 RSESGPISLVVNACASRDIKESVVGVCFIAQDITAQKSMMDKFTRIEGDYKAIVQNPNPL 597
Query: 747 IPPIFASDE 755
IPPIF +DE
Sbjct: 598 IPPIFGTDE 606
>gi|89330108|emb|CAJ80966.1| phytochrome A [Penstemon cobaea]
Length = 607
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/607 (57%), Positives = 447/607 (73%), Gaps = 31/607 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV +E +P EPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFSEVTKPGHEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + V+QDE L L L GSTLRAPHGCH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRAKHVKVVQDEKLSFDLTLCGSTLRAPHGCHLQYMENMSSIASLVMSVV 180
Query: 359 INGNDEE---AVGGRSTTRLWA--------------------------FGLQLNMELQLA 389
+N DE+ +V + RLW F + +N EL+L
Sbjct: 181 VNEGDEDGPDSVIPQKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 390 SQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE 449
+Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGAAL Y+ K Y +G+TPT+
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALMYKNKKYKMGLTPTD 300
Query: 450 TQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSH 509
QI+DIV WL YH DSTGLSTDSL DAGYP A LGDAVCGMA I+ D+LFWFRSH
Sbjct: 301 FQIRDIVSWLDAYHRDSTGLSTDSLYDAGYPGALALGDAVCGMAAVKISDEDWLFWFRSH 360
Query: 510 TAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRD 569
TA EI+WGGAKH +KDDG++MHPRSSFKAFLEVVK+RSLP+ + EMDAIHSLQLILR+
Sbjct: 361 TAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPFKDYEMDAIHSLQLILRN 420
Query: 570 SFRDAE-ASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
+F+D E A ++ +L DL + G+ EL +V EMVRLIETA+ PI AVDV G VNGW
Sbjct: 421 AFKDGENAEADTKAIHTRLTDLRIDGMQELEAVTSEMVRLIETASVPILAVDVEGYVNGW 480
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
N+K+A+LTGL V+EA+GK + +LV + V +L AL+G+E++NV+ +++T G +
Sbjct: 481 NSKIADLTGLRVDEAIGKQFL-ELVEDSSTDSVSKMLKLALQGKEEQNVQFEIKTHGQRS 539
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ +VVNAC+SKD N+VGVCF+ QD+T K +MDKF I+GDYKAIV +PNPLIP
Sbjct: 540 DSGPITLVVNACASKDVKENVVGVCFIAQDITAHKNMMDKFTRIEGDYKAIVQNPNPLIP 599
Query: 749 PIFASDE 755
PIF +DE
Sbjct: 600 PIFGTDE 606
>gi|406685349|gb|AFS51115.1| phytochrome P, partial [Cupressus chengiana]
Length = 507
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/490 (72%), Positives = 399/490 (81%), Gaps = 28/490 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEV+AE +
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY GK++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K VV+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSENKTVVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGVVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESVETVAKMLY 497
Query: 667 HALKGEEDKN 676
+AL+GEEDKN
Sbjct: 498 NALRGEEDKN 507
>gi|363547897|gb|AEW26988.1| phytochrome P [Cryptomeria japonica]
Length = 484
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/472 (74%), Positives = 397/472 (84%), Gaps = 16/472 (3%)
Query: 216 SQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRP 275
SQ+LAVRA S+LQ++P GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +R
Sbjct: 13 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 72
Query: 276 DLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRA 335
DLEPY GLHYPATDIPQASRFLF QNRVR+I DC A P+ VIQ E L QPLCLVGSTLRA
Sbjct: 73 DLEPYLGLHYPATDIPQASRFLFMQNRVRVICDCRANPVGVIQVEELKQPLCLVGSTLRA 132
Query: 336 PHGCHAQYMANMGSIASLALAVIINGNDEE---AVGGRSTTR-------------LWAFG 379
PHGCHAQYMANMGSIASL +AVI+NGN + V ++ R + FG
Sbjct: 133 PHGCHAQYMANMGSIASLVMAVIVNGNVKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFG 192
Query: 380 LQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGK 439
LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDLVKCDGAALYY GK
Sbjct: 193 LQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGK 252
Query: 440 YYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITK 499
++ LGVTPT QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LGDAVCGMA A IT
Sbjct: 253 FWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 312
Query: 500 RDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDA 559
+DFLFWFRSHTAKE+KWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK RSLPW+N EMDA
Sbjct: 313 KDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDA 372
Query: 560 IHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAV 619
IHSLQLILR SF+D + S +K +V+ QL DL+LQG+DELSSVA EMVRLIETATAPI AV
Sbjct: 373 IHSLQLILRGSFQDIDDSETKTMVHVQLHDLKLQGIDELSSVANEMVRLIETATAPILAV 432
Query: 620 DVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKG 671
D G VNGWNAK AELTGL V EAMGKSLVHDLV++E E V+ +L+HAL+G
Sbjct: 433 DSAGIVNGWNAKAAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLYHALRG 484
>gi|89331043|emb|CAJ80888.1| phytochrome A [Boschniakia hookeri]
Length = 615
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/617 (56%), Positives = 454/617 (73%), Gaps = 34/617 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQ+LPGG ++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPGGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + V+QDE L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 IN-----GNDEEAVGGRSTTRLWA--------------------------FGLQLNMELQ 387
+N G D +V + T LW F + +N E +
Sbjct: 181 VNEGNEDGPDSSSVPDKRKT-LWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIYVNKEFE 239
Query: 388 LASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTP 447
L +Q+ EK++LRTQTLLCD+LLRD+P GIV+QSP++MDLVKCDGA L Y+ Y LG+TP
Sbjct: 240 LENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKNTKYRLGLTP 299
Query: 448 TETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFR 507
++ QI+DIV WL YH DSTGLSTDSL DAG+P A +L DAVCGM IT+RD+LFWFR
Sbjct: 300 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLCDAVCGMVAVRITERDWLFWFR 359
Query: 508 SHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLIL 567
SHTA EI+WGGAKH P + DDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLIL
Sbjct: 360 SHTAAEIQWGGAKHEPGETDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLIL 419
Query: 568 RDSFRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
R++F+++E +S++ ++A+L DL++ GV E+ +V EMVRLIETA+ PIFAVDV G VN
Sbjct: 420 RNAFKESEGRDSESREIHARLHDLQIDGVREIEAVTSEMVRLIETASVPIFAVDVDGLVN 479
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWN K+A+LTGL V++A+G + LV + V +L AL+G+E++NV+ +++T G
Sbjct: 480 GWNTKIADLTGLCVDKAIGWHFLA-LVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQ 538
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
+ + ++VNAC+S+D N+VGVCF+ QD+T QK++MDKF I+GDY+ IV +PNPL
Sbjct: 539 TSESGPITLIVNACASRDVKGNVVGVCFIAQDITTQKIMMDKFTRIEGDYRTIVQNPNPL 598
Query: 747 IPPIFASDENTCCSEWN 763
IPPIF +DE CSEWN
Sbjct: 599 IPPIFGTDEFGWCSEWN 615
>gi|89330092|emb|CAJ80958.1| phytochrome A [Paulownia tomentosa]
Length = 607
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/608 (57%), Positives = 448/608 (73%), Gaps = 33/608 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV +++D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV E +P LEPY GLHYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLS 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + V+QDE L L L GSTLRAPH CH QYM NM SIASL ++ +
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSAV 180
Query: 359 INGNDEEAVGG---RSTTRLWA--------------------------FGLQLNMELQLA 389
+N DEE RLW F + +N EL+L
Sbjct: 181 VNEGDEEGSDSSHPEKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 390 SQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTE 449
+Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGAAL Y+ K Y LG+TP++
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYRLGLTPSD 300
Query: 450 TQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSH 509
QI+DIV WL YH DSTGLSTDSL DAG+P A LGDAVCGMA IT +D+LFWFRSH
Sbjct: 301 FQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFRSH 360
Query: 510 TAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRD 569
TA EI+WGGAKH P KDDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR+
Sbjct: 361 TAAEIRWGGAKHEPGGKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 570 SFRDAEASN--SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNG 627
+F++AE ++ SKA ++ +L DL+++G+ EL +V EMVRLIETA+ PI AVDV G VNG
Sbjct: 421 AFKEAEDTDLGSKA-IHTRLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNG 479
Query: 628 WNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAE 687
WN K+A+LTGL V++A+G+ + LV + V +L AL+G+E++NV+ +++T G
Sbjct: 480 WNTKIADLTGLPVDKAIGRHFLA-LVEDSSADTVSKMLELALQGKEERNVQFEIKTHGPR 538
Query: 688 NRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLI 747
+ + +VVNAC+S+D N+VGVCF+ QD+T QK +MDKF I+GDY+AIV +PNPLI
Sbjct: 539 SESGPISLVVNACASRDVKENVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIVQNPNPLI 598
Query: 748 PPIFASDE 755
PPIF +DE
Sbjct: 599 PPIFGTDE 606
>gi|406685383|gb|AFS51132.1| phytochrome P, partial [Juniperus scopulorum]
Length = 542
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/525 (68%), Positives = 411/525 (78%), Gaps = 29/525 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S+LQ++ GDI LLCD+VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 20 VPSQKLAVRATSRLQAVANGDIGLLCDSVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 79
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q
Sbjct: 80 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQXXXXXXXXX 139
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
MANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 140 XXXXXXXXXXMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 199
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 200 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 259
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY K++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 260 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 319
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 320 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 379
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 380 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKNKTMVHAQMNDLKLQG-DELNSAACEMV 438
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 439 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 498
Query: 667 HALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVG 711
+AL+GEEDKNVEIKLRTFG + +K+ V +VVNACSS+DYT NIVG
Sbjct: 499 NALRGEEDKNVEIKLRTFGPQMQKE-VILVVNACSSRDYTYNIVG 542
>gi|315377393|gb|ADU05534.1| phytochrome A [Schizopetalon walkeri]
Length = 599
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/600 (57%), Positives = 444/600 (74%), Gaps = 34/600 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FHED+HGEVV+E +P L+PY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFIKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E G STT
Sbjct: 121 LQDEKLSVDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGSGPESTTQPQ 180
Query: 374 ---RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLL 404
RLW F + +N E++L +QL EK++LRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQLVEKNILRTQTLL 240
Query: 405 CDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG 464
CDML+RD+P GIV+QSP++MDLVKCDGAAL YQ K + LG+TPTE +++I WL YH
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYQDKIWKLGITPTEYHLQEIASWLCEYHT 300
Query: 465 DSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 524
DSTGLSTDSL DAG+PKA LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISPRDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 525 DKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKA-VV 583
DKDD +RMHPRSSFKAFLEVVK+RSLPW + EM+AIHSLQLILR++F+D+E+S+ A ++
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMNAIHSLQLILRNAFKDSESSDVNAKII 420
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+++L DL + G+ EL +V EMVRLI+TAT PI AVD G VNGWN K+AELTGL V+EA
Sbjct: 421 HSKLNDLNIDGIQELEAVTSEMVRLIDTATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
+GK L+ +LV EIV +L +AL+G E++NV+ +++T + + +V NAC+S+
Sbjct: 481 IGKHLL-ELVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHRSGADAGPISLVANACASR 539
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +P+PLIPPIF +DE C+EWN
Sbjct: 540 DSCENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPSPLIPPIFGTDEFGWCTEWN 599
>gi|345424324|gb|AEN85266.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/599 (57%), Positives = 443/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E G STT
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTTPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLLA-LVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|406685377|gb|AFS51129.1| phytochrome P, partial [Juniperus oxycedrus]
Length = 507
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/490 (72%), Positives = 397/490 (81%), Gaps = 28/490 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQKLAVRA S++Q++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VHSQKLAVRATSRVQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N GNDE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDML RD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLFRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY K++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKNKTMVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 497
Query: 667 HALKGEEDKN 676
+AL+GEEDKN
Sbjct: 498 NALRGEEDKN 507
>gi|345424326|gb|AEN85267.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/599 (57%), Positives = 443/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E G ST+
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTSPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424412|gb|AEN85310.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/599 (57%), Positives = 443/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQKVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST+
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNASPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TPT+ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424408|gb|AEN85308.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/599 (57%), Positives = 443/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVGV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424402|gb|AEN85305.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/599 (57%), Positives = 443/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424394|gb|AEN85301.1| phytochrome A, partial [Erucaria erucarioides]
gi|345424398|gb|AEN85303.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/599 (57%), Positives = 442/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST---- 372
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E G ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 373 -TRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LGVTP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424406|gb|AEN85307.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/599 (57%), Positives = 443/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|406685381|gb|AFS51131.1| phytochrome P, partial [Juniperus procera]
Length = 507
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/490 (72%), Positives = 397/490 (81%), Gaps = 28/490 (5%)
Query: 214 VQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESK 273
V SQK+AVRA S+LQ++ GDI LLCD VVE VR+LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 19 VPSQKVAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 274 RPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTL 333
R DLEPY GLHYPATDIPQASRFLF QN+VRMI DC A P+ +IQ E L Q LCLVGSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 334 RAPHGCHAQYMANMGSIASLALAVIIN-GNDEEAVGGRSTTRLWA--------------- 377
RAPHGCHAQYMANMGSIASLA+AVI+N G DE GR+T +LW
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGKDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 378 -----------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDL 426
F LQ+NME+QLA+QL+E ++LRTQTLLCDMLLRD+P GIVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 427 VKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLG 486
VKCDGAALYY K++ +GVTPTE QIKDI +WLL YHGDSTGLSTDSLADAGYP AA+LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 487 DAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 546
DAVCGMA A IT +DFLFWFRSHTAKEIKWGGAKHHP+DKDDG+RMHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 547 SRSLPWDNAEMDAIHSLQLILRDSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMV 606
RSLPWDN EMDAIHSLQLILR SF+D + S +K +V+AQ+ DL+LQG DEL+S A EMV
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKNKTMVHAQMNDLKLQG-DELNSAACEMV 437
Query: 607 RLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLH 666
R+IETA API VD G VNGWN+ AELTGL EEAMGKSLVHDLV +E E V +L+
Sbjct: 438 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 497
Query: 667 HALKGEEDKN 676
+AL+GEEDKN
Sbjct: 498 NALRGEEDKN 507
>gi|345424396|gb|AEN85302.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/599 (57%), Positives = 441/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDTVV+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST---- 372
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E G ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 373 -TRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LGVTP++ ++++ WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEVASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQIPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424330|gb|AEN85269.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 443/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E G ST+
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTSPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CS+WN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSDWN 598
>gi|345424276|gb|AEN85242.1| phytochrome A, partial [Coincya longirostra]
Length = 599
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/600 (57%), Positives = 439/600 (73%), Gaps = 34/600 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVGV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E +T
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 374 ---RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLL 404
RLW F + +N E++L +Q+ EK++LRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 405 CDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG 464
CDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG+TP+E Q+ +I WL YH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHT 300
Query: 465 DSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 524
DSTGLSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 525 DKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVV 583
DKDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++FRD E ++ + ++
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
+GK + LV EIV +L AL+G E++NV+ +++T + + +VVNAC+S+
Sbjct: 481 IGKHFL-TLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424278|gb|AEN85243.1| phytochrome A, partial [Coincya longirostra]
Length = 599
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/600 (57%), Positives = 439/600 (73%), Gaps = 34/600 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E +T
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 374 ---RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLL 404
RLW F + +N E++L +Q+ EK++LRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 405 CDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG 464
CDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG+TP+E Q+ +I WL YH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHT 300
Query: 465 DSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 524
DSTGLSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 525 DKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVV 583
DKDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++FRD E ++ + ++
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
+GK + LV EIV +L AL+G E++NV+ +++T + + +VVNAC+S+
Sbjct: 481 IGKHFL-TLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424280|gb|AEN85244.1| phytochrome A, partial [Coincya longirostra]
Length = 595
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/596 (57%), Positives = 438/596 (73%), Gaps = 30/596 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FHED+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGN--DEEAVGGRSTTR 374
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D+ + R
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHTCHLQYMANMDSIASLVMAVVVNEEEADDSTTETQKRKR 180
Query: 375 LWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDML 408
LW F + +N E++L +Q+ EK++LRTQTLLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 409 LRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTG 468
+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG+TP+E Q+ +I WL YH DSTG
Sbjct: 241 MRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHTDSTG 300
Query: 469 LSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 528
LSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH P+DKDD
Sbjct: 301 LSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 360
Query: 529 GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQL 587
+RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++FRD E ++ + +++++L
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKIIHSKL 420
Query: 588 VDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKS 647
DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+GK
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKH 480
Query: 648 LVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTN 707
+ LV EIV +L AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 FL-TLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHE 539
Query: 708 NIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 NVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 595
>gi|345424410|gb|AEN85309.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/599 (57%), Positives = 442/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYP TDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPTTDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST+
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TPT+ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89330110|emb|CAJ80967.1| phytochrome A [Phtheirospermum japonicum]
Length = 610
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/610 (56%), Positives = 449/610 (73%), Gaps = 34/610 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV G++ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LT YDRVM+Y+FH+D+HGEV++E +P L+PY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTSYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + VIQD+ L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRST-----TRLWA--------------------------FGLQLNMELQ 387
+N +E+ S+ RLW F + +N E++
Sbjct: 181 VNEGNEDGPDSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIE 240
Query: 388 LASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTP 447
L +Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGA L Y+ K Y LG+TP
Sbjct: 241 LENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTP 300
Query: 448 TETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFR 507
++ QI+DIV WL YH DSTGLSTDSL DAG+P A LGDAVCGMA IT +D+LFWFR
Sbjct: 301 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFR 360
Query: 508 SHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLIL 567
SHTA EI+WGGAKH P +KDDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLIL
Sbjct: 361 SHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDIEMDAIHSLQLIL 420
Query: 568 RD-SFRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCV 625
R+ S ++AE + ++A+L DL+L G+ EL +V EMVRLIETA+ PIFAVDV G V
Sbjct: 421 RNASNKEAEERDMDGKEIHARLNDLQLDGMQELEAVTSEMVRLIETASVPIFAVDVDGLV 480
Query: 626 NGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFG 685
NGWN K+A+LTGL VE+A+G+ + LV E V+ +L AL+G E++NV+ +++T G
Sbjct: 481 NGWNTKIADLTGLPVEKAIGRHFLA-LVEDSSAEKVNKMLELALQGNEERNVQFEIKTHG 539
Query: 686 AENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNP 745
+ + ++VNAC+S+D N+VGVCF+ QD+T QK +MDKF I+GDY+AIV +PN
Sbjct: 540 PRSESGPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQ 599
Query: 746 LIPPIFASDE 755
LIPPIF SDE
Sbjct: 600 LIPPIFGSDE 609
>gi|345424334|gb|AEN85271.1| phytochrome A, partial [Didesmus aegyptius]
gi|345424336|gb|AEN85272.1| phytochrome A, partial [Didesmus aegyptius]
gi|345424338|gb|AEN85273.1| phytochrome A, partial [Didesmus bipinnatus]
gi|345424344|gb|AEN85276.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 442/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424328|gb|AEN85268.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/599 (57%), Positives = 441/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E G STT
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTTPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK +LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKDILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLLA-LVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDK I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKLTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424400|gb|AEN85304.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/599 (57%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST---- 372
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E G ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 373 -TRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI +QSP+IMDLVKCDGAAL Y+ K + LGVTP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGITSQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSLPW + EMDAIHSLQ ILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQFILRNAFKDGETTDVNTTIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424194|gb|AEN85201.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/599 (57%), Positives = 441/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++FRD E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPISAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424198|gb|AEN85203.1| phytochrome A, partial [Cakile arabica]
gi|345424416|gb|AEN85312.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 441/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424392|gb|AEN85300.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/599 (57%), Positives = 441/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST---- 372
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E G ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 373 -TRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LGVTP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA IT +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMATVRITSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GD KAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTSIEGDCKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424340|gb|AEN85274.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 441/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI+ QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIIPQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424424|gb|AEN85316.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 441/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP++MDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNVMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424404|gb|AEN85306.1| phytochrome A, partial [Erucaria hispanica]
Length = 597
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/598 (57%), Positives = 441/598 (73%), Gaps = 33/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVREVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424414|gb|AEN85311.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/598 (57%), Positives = 441/598 (73%), Gaps = 33/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST+
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TPT+ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424378|gb|AEN85293.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 598
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 441/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+F +D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFRDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN-----GNDEEAVGGRS 371
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N GND ++ +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGNDPDSTSPQK 180
Query: 372 TTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLREIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSL W + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLAWKDYEMDAIHSLQLILRNAFKDGETTDVNTNIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G ED+NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424536|gb|AEN85372.1| phytochrome A, partial [Psychine stylosa]
Length = 598
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 443/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E STT
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRS TA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSPTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D EA++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ +V + EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TVVEESSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424428|gb|AEN85318.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHHDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP++MDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNVMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTRIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424422|gb|AEN85315.1| phytochrome A, partial [Erucaria pinnata]
gi|345424426|gb|AEN85317.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHHDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E S+
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSSAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|33333490|gb|AAQ11878.1| phytochrome B [Stellaria longipes]
Length = 424
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/425 (80%), Positives = 368/425 (86%), Gaps = 27/425 (6%)
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
+WIHSK KPFYAILHR+DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP
Sbjct: 1 VWIHSKANEKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 60
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GGD+KLLCDTVVESVRQL YDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYP+TDIP
Sbjct: 61 GGDVKLLCDTVVESVRQLAAYDRVMVYKFHEDEHGEVVAESKRADLEPYLGLHYPSTDIP 120
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDCHA + V+QDE L QPLCLVGSTLRAPHGCH+QYMANMGSIA
Sbjct: 121 QASRFLFKQNRVRMIVDCHADSVSVVQDERLRQPLCLVGSTLRAPHGCHSQYMANMGSIA 180
Query: 352 SLALAVIINGNDEEAVGGRSTTRLW--------------------------AFGLQLNME 385
SL +AVIINGND+E R+ RLW AFGLQLNME
Sbjct: 181 SLVMAVIINGNDDEG-STRNAMRLWGLVVCHHTSPRSIPFPLRYACEFLMQAFGLQLNME 239
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
LQL++Q+ EK VLRTQTLLCDM+LR+SP GIVTQSPSIMDLVKCDGAAL ++GKYYPLGV
Sbjct: 240 LQLSAQVLEKRVLRTQTLLCDMILRESPTGIVTQSPSIMDLVKCDGAALLFRGKYYPLGV 299
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TPTE Q+KDIV+WLL+ HGDSTGLSTDSLADAGYP A L DAVCGMAVA+IT+ DFLFW
Sbjct: 300 TPTELQLKDIVQWLLSNHGDSTGLSTDSLADAGYPGALALADAVCGMAVAFITRSDFLFW 359
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTAKE+KWGGAKHHPEDKDD QRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQL
Sbjct: 360 FRSHTAKEVKWGGAKHHPEDKDDVQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQL 419
Query: 566 ILRDS 570
ILRDS
Sbjct: 420 ILRDS 424
>gi|345424332|gb|AEN85270.1| phytochrome A, partial [Didesmus aegyptius]
Length = 597
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/598 (57%), Positives = 441/598 (73%), Gaps = 33/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424192|gb|AEN85200.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 441/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN-----GNDEEAVGGRS 371
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N G+ ++ +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEGGEGDAPDSTAPQK 180
Query: 372 TTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK+ LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNTLRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHAD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|33333484|gb|AAQ11875.1| phytochrome B [Stellaria longipes]
Length = 424
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/425 (80%), Positives = 368/425 (86%), Gaps = 27/425 (6%)
Query: 172 IWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLP 231
+WIHSK KPFYAILHR+DVGIVIDLEPAR EDPALSIAGAVQSQKLAVRAISQLQSLP
Sbjct: 1 VWIHSKANEKPFYAILHRIDVGIVIDLEPARIEDPALSIAGAVQSQKLAVRAISQLQSLP 60
Query: 232 GGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIP 291
GGD+KLLCDTVVESVRQLT YDRVMVY+FHEDEHGEVVAESKR DLEPY GLHYP+TDIP
Sbjct: 61 GGDVKLLCDTVVESVRQLTAYDRVMVYKFHEDEHGEVVAESKRADLEPYLGLHYPSTDIP 120
Query: 292 QASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIA 351
QASRFLFKQNRVRMIVDCHA + V+QDE L QPLCLVGSTLRAPHGCH+QYMANMGSIA
Sbjct: 121 QASRFLFKQNRVRMIVDCHADSVSVVQDERLRQPLCLVGSTLRAPHGCHSQYMANMGSIA 180
Query: 352 SLALAVIINGNDEEAVGGRSTTRLW--------------------------AFGLQLNME 385
SL +AVIINGND+E R+ RLW AFGLQLNME
Sbjct: 181 SLVMAVIINGNDDEG-STRNAMRLWGLVVCHHTSPRSIPFPLRYACEFLMQAFGLQLNME 239
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
LQL++Q+ EK VLRTQTLLCDM+LR+SP GIVTQSPSIMDLVKCDGAAL ++GKYYPLGV
Sbjct: 240 LQLSAQVLEKRVLRTQTLLCDMILRESPTGIVTQSPSIMDLVKCDGAALLFRGKYYPLGV 299
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TPTE Q+KDIV+WLL+ HGDSTGLSTDSLADAGYP A L DAVCGMAVA+IT+ DFLFW
Sbjct: 300 TPTELQLKDIVQWLLSNHGDSTGLSTDSLADAGYPGALALADAVCGMAVAFITRSDFLFW 359
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTAKE+KWGGAKHHPEDKDD QRMHPRSSFKAFLEVVKSRSLPW+NAEMDAIHSLQL
Sbjct: 360 FRSHTAKEVKWGGAKHHPEDKDDVQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQL 419
Query: 566 ILRDS 570
ILRDS
Sbjct: 420 ILRDS 424
>gi|345424418|gb|AEN85313.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FW RSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWVRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424420|gb|AEN85314.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKPSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424380|gb|AEN85294.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 597
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/598 (57%), Positives = 440/598 (73%), Gaps = 33/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN-----GNDEEAVGGRS 371
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N G+D ++ +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDDPDSTSPQK 180
Query: 372 TTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALPLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSL W + EMDAIHSLQLILRD+F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLAWKDYEMDAIHSLQLILRDAFKDGETTDVNTNIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G ED+NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEW
Sbjct: 540 LHGNVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424260|gb|AEN85234.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLREIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424342|gb|AEN85275.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/598 (57%), Positives = 440/598 (73%), Gaps = 33/598 (5%)
Query: 198 LEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMV 257
EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 258 YRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVI 317
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V+
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 318 QDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT---- 373
QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKR 181
Query: 374 -RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCD 406
RLW F + +N E++L +Q+ EK++LRTQTLLCD
Sbjct: 182 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 241
Query: 407 MLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDS 466
ML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH DS
Sbjct: 242 MLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTDS 301
Query: 467 TGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDK 526
TGLSTDSL DAG+P+A +LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+DK
Sbjct: 302 TGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDK 361
Query: 527 DDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNA 585
DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E+++ + ++++
Sbjct: 362 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIHS 421
Query: 586 QLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMG 645
+L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+G
Sbjct: 422 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIG 481
Query: 646 KSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDY 705
K L+ LV EIV +L AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 482 KHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 706 TNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCF D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 541 HENVVGVCFAAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424202|gb|AEN85205.1| phytochrome A, partial [Cakile arctica]
gi|345424206|gb|AEN85207.1| phytochrome A, partial [Cakile constricta]
gi|345424216|gb|AEN85212.1| phytochrome A, partial [Cakile constricta]
gi|345424220|gb|AEN85214.1| phytochrome A, partial [Cakile constricta]
gi|345424224|gb|AEN85216.1| phytochrome A, partial [Cakile edentula]
gi|345424230|gb|AEN85219.1| phytochrome A, partial [Cakile edentula]
gi|345424252|gb|AEN85230.1| phytochrome A, partial [Cakile lanceolata]
gi|345424256|gb|AEN85232.1| phytochrome A, partial [Cakile lanceolata]
gi|345424258|gb|AEN85233.1| phytochrome A, partial [Cakile lanceolata]
gi|345424274|gb|AEN85241.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424204|gb|AEN85206.1| phytochrome A, partial [Cakile arctica]
gi|345424232|gb|AEN85220.1| phytochrome A, partial [Cakile edentula]
gi|345424236|gb|AEN85222.1| phytochrome A, partial [Cakile edentula]
gi|345424240|gb|AEN85224.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331101|emb|CAJ80917.1| phytochrome A [Euphrasia regelii]
Length = 619
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/620 (56%), Positives = 447/620 (72%), Gaps = 36/620 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AIS+LQSLP G ++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
C+T+V+ V +LTGYDRVM+Y+FHED+HGEV+ E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + VIQD L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRST------TRLWA--------------------------FGLQLNMEL 386
+N +EEA S+ RLW F + +N EL
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
+L +Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGA L ++ + + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
P++ QI+DIV WL YH DSTGLSTD L DAG+P A LGD VCGMA IT RD+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDGLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTA EI+WGGAKH ++DDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHEQGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 567 LRD--SFRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHG 623
LR+ S E + + V + A+L +L++ GV EL +V EMVRLIETA+ PIFAV V G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 624 CVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRT 683
VNGWN K+A+LTGL V++A+G + LV + E V +L AL+G+E++NV +++T
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGVHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIKT 539
Query: 684 FGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSP 743
G + + ++VNAC+S+D N+VGVCF+ QD+T QK VMDKF I+GDY+AIV +P
Sbjct: 540 HGPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNP 599
Query: 744 NPLIPPIFASDENTCCSEWN 763
NP+IPPIF +DE CSEWN
Sbjct: 600 NPVIPPIFGTDEFGWCSEWN 619
>gi|345424502|gb|AEN85355.1| phytochrome A, partial [Kremeriella cordylocarpus]
Length = 599
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/600 (56%), Positives = 439/600 (73%), Gaps = 34/600 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E + LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E +T
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 374 ---RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLL 404
RLW F + +N E++L +Q+ EK++LRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 405 CDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG 464
CDML+RD+P GIV+QSP++MDLVKCDGAAL Y+ K + LG+TP+E +++I WL YH
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 465 DSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 524
DSTGLSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 525 DKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVV 583
DKDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + ++
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA
Sbjct: 421 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+
Sbjct: 481 IGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424242|gb|AEN85225.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAEHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADVGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424262|gb|AEN85235.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 439/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDTVV+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENAVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377406|gb|ADU05540.1| phytochrome A [Tovaria pendula]
Length = 598
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 438/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDCHA + V
Sbjct: 61 TYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST---- 372
+QDE L L L GSTLRAPH CH QYM NM SIASL +AV++N DEE+ S
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVVNEGDEESDAPNSAQAQK 180
Query: 373 -TRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N EL+L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELDNQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TPT++Q+ DI WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKNKIWRLGITPTDSQLHDIAAWLSDYHRD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A TLGDAVCGMA +T +D +FWFRSHTA EIKWGGAKH P +
Sbjct: 301 STGLSTDSLYDAGFPQALTLGDAVCGMAAVRVTSKDMIFWFRSHTAGEIKWGGAKHEPGE 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KD+ ++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + ++
Sbjct: 361 KDNARKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDFNTKFLH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V++A+
Sbjct: 421 SKLNDLKIDGMKELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDKAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
G + LV + V +L AL+G+E++NV+ +++T GA + +VVNAC+S+D
Sbjct: 481 GNHFL-TLVEDSSVDRVKKMLDMALQGKEEQNVQFEIKTHGARIDAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV QD+T QK VMDKF I+GDYK I+ +PNP IPPIF SDE C+EWN
Sbjct: 540 LQENVVGVCFVAQDLTGQKNVMDKFTRIEGDYKVIIQNPNPXIPPIFGSDEFGWCTEWN 598
>gi|345424210|gb|AEN85209.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
G+ L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GRHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331135|emb|CAJ80934.1| phytochrome A [Lindenbergia muraria]
Length = 611
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/611 (55%), Positives = 447/611 (73%), Gaps = 35/611 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV +++D EP + D ++ AGA+QS +LA +AI++LQSLP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKLHDVPMTAAGALQSYELAAKAITRLQSLPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+ + V +LTGYDRVM+Y+FH+D+HGEV+ E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMAQEVFELTGYDRVMIYKFHDDDHGEVITEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC + + V+QD L L L GSTLRAPH CHAQYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRSNNVKVVQDGNLPFDLTLCGSTLRAPHSCHAQYMGNMTSIASLVMSVV 180
Query: 359 INGNDEEAVGGRSTT-------RLWA--------------------------FGLQLNME 385
+N +EEA S++ RLW F + +N E
Sbjct: 181 VNEGEEEASSPDSSSSHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHINKE 240
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
++L +Q+ EK++LRTQTLLCDMLLRD+P G+V+QSP+IMDLVKCDGA L Y+ + Y G+
Sbjct: 241 VELENQMLEKNILRTQTLLCDMLLRDAPLGVVSQSPNIMDLVKCDGAMLLYKNEKYRFGL 300
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TP++ QI+DIV WL YH DSTGLSTDSL DAG+P A LGDAVCGMA IT D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITGGDWLFW 360
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTA EI+WGGAKH +KDDG +MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHELGEKDDGGKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 420
Query: 566 ILRDSFRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGC 624
ILR++ R+AE + + V + A+L DL++ G+ EL +V EMVRLIETA+ PIFAVD G
Sbjct: 421 ILRNAAREAEKKDWEGVELQARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDGDGL 480
Query: 625 VNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTF 684
VNGWN K+++LTGL V++A+G +H LV + V +L A++G+E++NV+ +++T
Sbjct: 481 VNGWNTKISDLTGLPVDKAIGTHFLH-LVEDSSADTVSKMLELAIQGKEERNVQFEIKTH 539
Query: 685 GAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPN 744
G ++ + ++VNAC+SKD N+VGVCF+ QD+T +K VMDKF I+GDY+AI+ +PN
Sbjct: 540 GPKSESAPITLIVNACASKDVKENVVGVCFIAQDITTEKSVMDKFTRIEGDYRAIIQNPN 599
Query: 745 PLIPPIFASDE 755
PLIPPIF +DE
Sbjct: 600 PLIPPIFGTDE 610
>gi|345424218|gb|AEN85213.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 439/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGA L Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAVLLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424246|gb|AEN85227.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 439/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHT E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTTGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331047|emb|CAJ80890.1| phytochrome A [Boschniakia strobilacea]
Length = 608
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/609 (55%), Positives = 448/609 (73%), Gaps = 34/609 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQ+LPGG ++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPGGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + V+QDE L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 IN-----GNDEEAVGGRSTTRLWA--------------------------FGLQLNMELQ 387
+N G D +V + T LW F + +N E +
Sbjct: 181 VNEGNEDGPDSSSVPDKRKT-LWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIYVNKEFE 239
Query: 388 LASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTP 447
L +Q+ EK++LRTQTLLCD+LLRD+P GIV+QSP++MD VKCDGA L Y+ Y LG+TP
Sbjct: 240 LENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDPVKCDGAVLLYKNTKYRLGLTP 299
Query: 448 TETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFR 507
++ QI+DIV WL YH DSTGLSTDSL DAG+P A +L DAVCGM IT+RD+LFWFR
Sbjct: 300 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLCDAVCGMVAVRITERDWLFWFR 359
Query: 508 SHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLIL 567
SHTA EI+WGGAKH P + DDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLIL
Sbjct: 360 SHTAAEIQWGGAKHEPGETDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLIL 419
Query: 568 RDSFRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
R++F+++E +S++ ++A+L DL++ GV E+ +V EMVRLIETA+ PIFAVDV G VN
Sbjct: 420 RNAFKESEGRDSESREIHARLHDLQIDGVREIEAVTSEMVRLIETASVPIFAVDVDGLVN 479
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWN K+A+LTGL V++A+G + LV + V +L AL+G+E++NV+ +++T G
Sbjct: 480 GWNTKIADLTGLCVDKAIGWHFLA-LVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQ 538
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
+ + ++VNAC+S+D N+VGVCF+ QD+T QK++MDKF I+GDY+ IV +PNPL
Sbjct: 539 TSESGPITLIVNACASRDVKENVVGVCFIAQDITTQKIMMDKFTRIEGDYRTIVQNPNPL 598
Query: 747 IPPIFASDE 755
IPPIF +DE
Sbjct: 599 IPPIFGTDE 607
>gi|315377373|gb|ADU05524.1| phytochrome A [Pachycladon stellatum]
Length = 599
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/600 (56%), Positives = 442/600 (73%), Gaps = 34/600 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSVERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FHED+HGEVV+E +P L+PY GLHYPATDIPQA+RFLF +N+VRMIVDC+A V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E S+T
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSSTQPQ 180
Query: 374 ---RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLL 404
RLW F + +N E++L +Q+ EK++LRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 405 CDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG 464
CDML+RD+P GIV+QSP+IMDLVKCDGAAL+Y+ K + LG+TP+E +++I WL YH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGITPSEFHLQEIASWLCEYHT 300
Query: 465 DSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 524
DSTGLSTDSL DAG+PKA ++GD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 301 DSTGLSTDSLHDAGFPKALSIGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDSN 360
Query: 525 DKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVV 583
D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDCETTDVNTKLI 420
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGLSV+EA
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
+GK L+ LV EIV+ +L +AL+G E++NV+ +++T + + ++VNAC+S+
Sbjct: 481 IGKHLLI-LVEDSSVEIVERMLENALEGTEEQNVQFEIKTHLSRADAGPISLIVNACTSR 539
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE +EWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWSTEWN 599
>gi|345424214|gb|AEN85211.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 439/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVV +RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVXTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89330154|emb|CAJ80989.1| phytochrome A [Triphysaria pusilla]
Length = 609
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/609 (56%), Positives = 447/609 (73%), Gaps = 33/609 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV++E +P L+ Y GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDSYAGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + VIQD+ L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRS----TTRLWA--------------------------FGLQLNMELQL 388
+N DE+ S RLW F + +N E++L
Sbjct: 181 VNEGDEDGPNSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 389 ASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPT 448
+Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGA L ++ K Y LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 449 ETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRS 508
+ QI+DIV WL YH DSTGLSTDSL DAG+P A LGDAVCGMA IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 509 HTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILR 568
HTA EI+WGGAKH P+DKDDG++MHPRSSFKAFL+VVK+RSLPW + EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 569 DSF-RDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
+S ++AE + ++A+L DL+L G EL +V EMVRLIETA+ PIFAVDV G VN
Sbjct: 421 NSSNKEAEKRDVDGKEIHARLNDLQLDGKRELEAVTSEMVRLIETASVPIFAVDVDGLVN 480
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWN K+A+LTGL V++A+GK + LV + E V+ +L AL+G E++NV+ +++T G
Sbjct: 481 GWNTKIADLTGLPVDKAIGKHFLA-LVEDSFAEAVNKMLGSALQGNEEQNVQFEIKTHGP 539
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
++ + ++VNAC+S+D N+VGVCF+ QD+T Q +MDKF I+GDY+AIV +PN L
Sbjct: 540 KSDSNPISLIVNACASRDVKENVVGVCFIAQDITTQISMMDKFTRIEGDYRAIVQNPNQL 599
Query: 747 IPPIFASDE 755
IPPIF SDE
Sbjct: 600 IPPIFGSDE 608
>gi|345424222|gb|AEN85215.1| phytochrome A, partial [Cakile constricta]
gi|345424228|gb|AEN85218.1| phytochrome A, partial [Cakile edentula]
gi|345424254|gb|AEN85231.1| phytochrome A, partial [Cakile lanceolata]
gi|345424264|gb|AEN85236.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/598 (57%), Positives = 439/598 (73%), Gaps = 33/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424250|gb|AEN85229.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 439/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCD +V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDMMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377363|gb|ADU05519.1| phytochrome A [Camelina hispida]
Length = 599
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/600 (57%), Positives = 438/600 (73%), Gaps = 34/600 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+ + V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FHED+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 374 ---RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLL 404
RLW F + +N E++L +Q+ EK++LRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 405 CDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG 464
CDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL YH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 465 DSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 524
DSTGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 525 DKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVV 583
D+ D +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + ++
Sbjct: 361 DRGDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGLSV+EA
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
+GK L+ LV EIV +L +AL+G E++NV+ +++T + +VVNAC+S+
Sbjct: 481 IGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGPISLVVNACASR 539
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+EWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424390|gb|AEN85299.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 440/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGIMERLCDTMVQEAFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST---- 372
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E G ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 373 -TRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LGVTP++ +++I L YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASRLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A +LGD+VCGMA I+ +D +FWFRSHTA E+KWGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424212|gb|AEN85210.1| phytochrome A, partial [Cakile constricta]
Length = 597
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/598 (57%), Positives = 439/598 (73%), Gaps = 33/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGGCSEW 597
>gi|345424526|gb|AEN85367.1| phytochrome A, partial [Muricaria prostrata]
Length = 598
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 438/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPNSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG+TP + +++I WL YH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH P D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPGD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + ++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424272|gb|AEN85240.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/598 (57%), Positives = 439/598 (73%), Gaps = 33/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|89331097|emb|CAJ80915.1| phytochrome A [Euphrasia alsa]
Length = 620
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/621 (55%), Positives = 445/621 (71%), Gaps = 36/621 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AIS+ QSLP G ++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPIKPHEVPMTAAGALQSYKLASKAISRFQSLPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
C+T+V+ V +LTGYDRVM+Y+FHED+HGEV+ E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + VIQD L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRST------TRLWA--------------------------FGLQLNMEL 386
+N +EEA S+ RLW F + +N EL
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
+L +Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGA L ++ + + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
P++ QI+DIV WL YH DSTGLSTDSL DAG+P A LGD VCGMA IT RD+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHHDSTGLSTDSLYDAGFPGALALGDIVCGMASVKITDRDWLFWF 360
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTA EI+WGG+KH ++DD ++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGSKHEQGERDDSRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 567 LRD--SFRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHG 623
LR+ S E + + V + A+L +L++ GV EL +V EMVRLIETA+ PIFAV V G
Sbjct: 421 LRNASSKEMGERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 624 CVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRT 683
VNGWN K+A LTGL V++A+G + LV + E V +L AL+G+E++NV ++RT
Sbjct: 481 LVNGWNTKIANLTGLPVDKAIGVHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIRT 539
Query: 684 FGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSP 743
G + + ++VNAC+S+D N+VGVCF+ QD+T QK VMDKF I+GDY+AIV +P
Sbjct: 540 HGPNSDSSPISLIVNACASRDVQENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNP 599
Query: 744 NPLIPPIFASDENTCCSEWNT 764
NP+IPPIF +DE CSEWN
Sbjct: 600 NPVIPPIFGTDEFGWCSEWNN 620
>gi|345424196|gb|AEN85202.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 439/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGY RVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYGRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E + LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424234|gb|AEN85221.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 439/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++ RTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNISRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424244|gb|AEN85226.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 439/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+ E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALERTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424180|gb|AEN85194.1| phytochrome A, partial [Brassica oleracea]
Length = 601
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/602 (56%), Positives = 440/602 (73%), Gaps = 36/602 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDTVV+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIIN---GNDEEAVGGRST- 372
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N G + +A ST
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGGEGDATAPDSTP 180
Query: 373 ----TRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQT 402
RLW F + +N E++L +Q+ EK++LRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 403 LLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTY 462
LLCDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG+TP+E +++I WL Y
Sbjct: 241 LLCDMLMRDTPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEY 300
Query: 463 HGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHH 522
H DSTGLSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 523 PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKA 581
P D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ +
Sbjct: 361 PVDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTK 420
Query: 582 VVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVE 641
+++++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 642 EAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACS 701
EA+GK L+ LV EIV +L +AL+ E++NV+ +++T + + +VVNAC+
Sbjct: 481 EAIGKHLL-TLVEDSSVEIVKRMLENALERTEEQNVQFEIKTHLSRADAGPISLVVNACA 539
Query: 702 SKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
S+D N+ GVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSE
Sbjct: 540 SRDLHENVAGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSE 599
Query: 762 WN 763
WN
Sbjct: 600 WN 601
>gi|345424266|gb|AEN85237.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/598 (57%), Positives = 439/598 (73%), Gaps = 33/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALSYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424270|gb|AEN85239.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 439/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAP CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPRSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331079|emb|CAJ80906.1| phytochrome A [Conopholis alpina]
Length = 605
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/607 (56%), Positives = 444/607 (73%), Gaps = 33/607 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQ+L GG ++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALRGGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A+ + V+QDE L L L GSTLRAPH CH YM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRASHVKVVQDENLPFDLTLCGSTLRAPHRCHLLYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAV----GGRSTTRLWA--------------------------FGLQLNMELQL 388
IN +E+ G LW F + +N EL+L
Sbjct: 181 INEGNEDGASSSSGPDKRKTLWGLLVCHNTSPRFVPFPLRYACEFLVQVFAIHVNKELEL 240
Query: 389 ASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPT 448
+Q+ EK++LRTQTLLCD+LLRD+P GIV+QSP++MDLVKC GA L Y+ Y LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCIGAVLLYKNTKYRLGLTPS 300
Query: 449 ETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRS 508
+ QI+DIV WL YH DSTGLSTDSL DAG+P A LGDA+CGMA IT RD+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHWDSTGLSTDSLYDAGFPGALALGDALCGMAAVRITDRDWLFWFRS 360
Query: 509 HTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILR 568
HTA EI+WGG KH P++KDDG +MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR
Sbjct: 361 HTAAEIQWGGMKHEPDEKDDGSKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 420
Query: 569 DSFRDAEASNSKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGW 628
++F+++E + + ++A+L +L++ GV E+ +VA EMVRLIETA+ PIFAVDV G VNGW
Sbjct: 421 NAFKESEGRDLE--IHARLNELQIGGVREIEAVATEMVRLIETASVPIFAVDVDGLVNGW 478
Query: 629 NAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAEN 688
N K+A+LTGL V +AMG + LV + V +L AL+G+E++NV+ +++T G +
Sbjct: 479 NTKIADLTGLCVNKAMGSHFLA-LVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQNS 537
Query: 689 RKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIP 748
+ ++VNAC+S+D N+VGVCF+ QD+T QK +MDKF I+GDY+AIV +PNPLIP
Sbjct: 538 ESGPITLMVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIP 597
Query: 749 PIFASDE 755
PIF +DE
Sbjct: 598 PIFGTDE 604
>gi|315377400|gb|ADU05537.1| phytochrome A [Koeberlinia spinosa]
Length = 598
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 437/599 (72%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ GA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTATGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDCHA + V
Sbjct: 61 TYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRST---- 372
+QDE L L L GSTLRAPH CH QYM NM SIASL +AV++N DEE+ S
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVVNEGDEESDAPNSAQAQK 180
Query: 373 -TRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N EL+L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELDNQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TPT++Q+ DI WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKNKIWRLGITPTDSQLHDIAAWLSDYHRD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A TLGDAVCGMA +T +D +FWFRSHTA EIKWGGAKH P +
Sbjct: 301 STGLSTDSLYDAGFPQALTLGDAVCGMAAVRVTSKDMIFWFRSHTAGEIKWGGAKHEPGE 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KD+ ++ HPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + ++
Sbjct: 361 KDNARKTHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDFNTKFLH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V++A+
Sbjct: 421 SKLNDLKIDGMKELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDKAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
G + LV + V +L AL+G+E++NV+ +++T GA + +VVNAC+S+D
Sbjct: 481 GNHFL-TLVEDSSVDRVKKMLDMALQGKEEQNVQFEIKTHGARIDAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV QD+T QK VMDKF I+GDYKAI+ +PNP IPPIF SDE C+EWN
Sbjct: 540 LQENVVGVCFVAQDLTGQKNVMDKFTRIEGDYKAIIQNPNPSIPPIFGSDEFGWCTEWN 598
>gi|345424200|gb|AEN85204.1| phytochrome A, partial [Cakile arctica]
Length = 597
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/598 (56%), Positives = 438/598 (73%), Gaps = 33/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
N+VGVCFV D+T QK VMDKF I+GDYKAI +PNPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIFQNPNPLIPPIFGTDEFGWCSEW 597
>gi|315377402|gb|ADU05538.1| phytochrome A [Moringa oleifera]
Length = 596
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/598 (57%), Positives = 439/598 (73%), Gaps = 35/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G I+ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEV++E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDCHA + V
Sbjct: 61 AYKFHDDDHGEVISEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHIKV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGG-----RS 371
+QDE L L L GSTLRAPH CH QYM NM SIASL +AV++N DEE G +
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEETDGANPVQPQK 180
Query: 372 TTRLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N EL+L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GIV+Q P+IMDLVKCDGAAL Y+ K + LGVTPT+ Q+ +I WL YH D
Sbjct: 241 DMLMRDAPLGIVSQIPNIMDLVKCDGAALLYKSKLWRLGVTPTDVQLHEIASWLSDYHMD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P A LGD V GMA IT +D LFWFRSHTA EI+WGGAKH P +
Sbjct: 301 STGLSTDSLYDAGFPGALALGDVVSGMAAVRITSKDMLFWFRSHTAAEIRWGGAKHEPGE 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEAS--NSKAVV 583
KDDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D + N+K +
Sbjct: 361 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDTKTVEFNTKT-I 419
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+++L DL+L+G+ EL +V EMVRLIETAT PI AVDV+G +NGWN K++ELTGL V+EA
Sbjct: 420 HSKLNDLKLEGMQELEAVTSEMVRLIETATVPILAVDVNGLLNGWNTKISELTGLPVDEA 479
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
+GK L+ LV + V +L+ AL+G+E+++V+ +++TFG+ + +VVNAC+S+
Sbjct: 480 IGKHLL-TLVEDSSIDTVKKMLYMALQGKEEQDVQFQIKTFGSRADAGPISLVVNACASR 538
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSE 761
D N+ GVCFV QD+T QK+VMDKF I+GDYKAIV + NPLIPPIF +DE C+E
Sbjct: 539 DLHENVAGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNHNPLIPPIFGADEFGWCTE 596
>gi|345424226|gb|AEN85217.1| phytochrome A, partial [Cakile edentula]
Length = 596
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/597 (56%), Positives = 438/597 (73%), Gaps = 33/597 (5%)
Query: 199 EPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVY 258
EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y
Sbjct: 1 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAY 60
Query: 259 RFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQ 318
+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V+Q
Sbjct: 61 KFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQ 120
Query: 319 DEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT----- 373
DE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 DEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKRK 180
Query: 374 RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDM 407
RLW F + +N E++L +Q+ EK++LRTQTLLCDM
Sbjct: 181 RLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDM 240
Query: 408 LLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDST 467
L+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH DST
Sbjct: 241 LMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTDST 300
Query: 468 GLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 527
GLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+DKD
Sbjct: 301 GLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDDKD 360
Query: 528 DGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQ 586
D +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++++
Sbjct: 361 DARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIHSK 420
Query: 587 LVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGK 646
L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+GK
Sbjct: 421 LNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAIGK 480
Query: 647 SLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYT 706
L+ L EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 HLL-TLAEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLH 539
Query: 707 NNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 ENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 596
>gi|345424524|gb|AEN85366.1| phytochrome A, partial [Muricaria prostrata]
Length = 597
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/598 (56%), Positives = 437/598 (73%), Gaps = 33/598 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPNSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG+TP + +++I WL YH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH P D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPGD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + ++
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEW 762
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|89331099|emb|CAJ80916.1| phytochrome A [Euphrasia collina]
Length = 621
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/621 (55%), Positives = 446/621 (71%), Gaps = 36/621 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AIS+ QSLP G ++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRFQSLPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
C+T+V+ V +LTGYDRVM+Y+FHED+HGEV+ E +P LEPY GLHYPATD+PQA+RFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDVPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + VIQD L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRST------TRLWA--------------------------FGLQLNMEL 386
+N +EEA S+ RLW F + +N EL
Sbjct: 181 VNEGNEEAGPDNSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
+L +Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGA L ++ + + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
P++ QI+DIV WL Y DSTGLSTDSL DAG+P A +LGD VCGMA IT RD+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYRHDSTGLSTDSLYDAGFPGALSLGDNVCGMAAVKITDRDWLFWF 360
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTA EI+WGG+KH ++DD ++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGSKHEQGERDDSRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 567 LRD--SFRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHG 623
LR+ S E + ++V + A+L +L++ GV EL +V EMVRLIETA+ PIFAV V G
Sbjct: 421 LRNASSKEMGERKDLESVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 624 CVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRT 683
VNGWN K+A LTGL V++A+G + LV + E V +L AL+G+E++NV +++T
Sbjct: 481 LVNGWNTKIANLTGLPVDKAIGVHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIKT 539
Query: 684 FGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSP 743
G + + ++VNAC+S+D N+VGVCF+ QD+T QK VMDKF I+GDY+AIV +P
Sbjct: 540 HGPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNP 599
Query: 744 NPLIPPIFASDENTCCSEWNT 764
NP+IPPIF +DE CSEWN
Sbjct: 600 NPVIPPIFGTDEFGWCSEWNN 620
>gi|345424372|gb|AEN85290.1| phytochrome A, partial [Eruca vesicaria]
Length = 592
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/595 (56%), Positives = 438/595 (73%), Gaps = 31/595 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-EAVGGRSTTRL 375
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N DE E+ + RL
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDEPESATPQKRKRL 180
Query: 376 WA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 409
W F + +N E+++ +Q+ EK++LRTQTLLCDML+
Sbjct: 181 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDMLM 240
Query: 410 RDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGL 469
RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL YH DSTGL
Sbjct: 241 RDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTGL 300
Query: 470 STDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 529
STDSL DAG+P+ LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH P+DKDD
Sbjct: 301 STDSLHDAGFPR--DLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDDA 358
Query: 530 QRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLV 588
+RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F++ E ++ + +++++L
Sbjct: 359 RRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGETTDVNTKIIHSKLN 418
Query: 589 DLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSL 648
DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGLSV+ A+GK L
Sbjct: 419 DLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDGAIGKHL 478
Query: 649 VHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNN 708
+ LV E+V +L +AL+G E++NV+ ++T + + VVNAC+S+D N
Sbjct: 479 L-TLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASRDLHEN 537
Query: 709 IVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 538 VVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 592
>gi|345424238|gb|AEN85223.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/598 (56%), Positives = 437/598 (73%), Gaps = 33/598 (5%)
Query: 198 LEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMV 257
EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V V +LTGYDRVM
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVREVFELTGYDRVMA 61
Query: 258 YRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVI 317
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V+
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 318 QDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT---- 373
QDE L L L GSTLRAPH C QYMANM SIASL +AV++N D E ST
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCRLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKR 181
Query: 374 -RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCD 406
RLW F + +N E++L +Q+ EK++LRTQTLLCD
Sbjct: 182 KRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 241
Query: 407 MLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDS 466
ML+RD+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH DS
Sbjct: 242 MLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTDS 301
Query: 467 TGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDK 526
TGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+DK
Sbjct: 302 TGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDDK 361
Query: 527 DDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNA 585
DD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + ++++
Sbjct: 362 DDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIHS 421
Query: 586 QLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMG 645
+L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+G
Sbjct: 422 KLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAIG 481
Query: 646 KSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDY 705
K L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 482 KHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 706 TNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424248|gb|AEN85228.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 438/599 (73%), Gaps = 33/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GS LRAPH CH QYMANM SIASL +AV++N D E ST
Sbjct: 121 LQDEKLSFDLTLCGSALRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+ D+P GI++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH D
Sbjct: 241 DMLMCDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+D
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
KDD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424268|gb|AEN85238.1| phytochrome A, partial [Cakile maritima]
Length = 593
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/588 (57%), Positives = 435/588 (73%), Gaps = 33/588 (5%)
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FH+D+HGE
Sbjct: 7 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGE 66
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
VV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V+QDE L L
Sbjct: 67 VVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQDEKLSFDLT 126
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----RLWA----- 377
L GSTLRAPH CH QYMANM SIASL +AV++N D E ST RLW
Sbjct: 127 LCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKRKRLWGLVVCH 186
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
F + +N E++L +Q+ EK++LRTQTLLCDML+RD+P GI
Sbjct: 187 NTSPRFVPFPLRYACEFLAQVFAIHVNKEVELGNQIVEKNILRTQTLLCDMLMRDAPLGI 246
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
++QSP+IMDLVKCDGAAL Y+ K + LG+TP++ +++I WL YH DSTGLSTDSL D
Sbjct: 247 ISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTDSTGLSTDSLHD 306
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AG+P+A LGD+VCGMA I+ RD +FWFRSHTA E++WGGAKH P+DKDD +RMHPRS
Sbjct: 307 AGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDDKDDARRMHPRS 366
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGV 595
SFKAFLEVVK+RS PW + EMDAIHSLQLILR++F+D E ++ + +++++L DL++ G+
Sbjct: 367 SFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIHSKLNDLQIDGI 426
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRLIETAT PI AVD G +NGWN K+AELTGL V+EA+GK L+ LV
Sbjct: 427 QELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAIGKHLL-TLVED 485
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D N+VGVCFV
Sbjct: 486 SSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHENVVGVCFV 545
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE CSEWN
Sbjct: 546 AHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 593
>gi|89331095|emb|CAJ80914.1| phytochrome A [Esterhazya campestris]
Length = 606
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/606 (56%), Positives = 444/606 (73%), Gaps = 33/606 (5%)
Query: 182 PFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDT 241
PFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT
Sbjct: 1 PFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDT 60
Query: 242 VVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQN 301
+V+ V +LTGYDRVM+Y+FH+D+HGEV++E +P LEPY GLHYPATDIPQA+RFLF +N
Sbjct: 61 MVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLFIKN 120
Query: 302 RVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIING 361
+VRMI DC A + VIQD+ L L L GSTLRAPH CH QYM NM SIASL ++V++N
Sbjct: 121 KVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNE 180
Query: 362 NDEEAVGGRS----TTRLWA--------------------------FGLQLNMELQLASQ 391
+E+ S RLW F + +N E++L +Q
Sbjct: 181 GNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNREIELENQ 240
Query: 392 LSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQ 451
+ EK++LRTQTLLCDML+RD+P GIV+QSP++MDLVKCDGA L Y+ K Y LG+TP++ Q
Sbjct: 241 MLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTPSDFQ 300
Query: 452 IKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTA 511
I+DIV WL YH DSTGLSTDSL DAG+P A LGDAVCGMA IT D+LFWFRSHTA
Sbjct: 301 IRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRSHTA 360
Query: 512 KEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRD-S 570
EI+WGGAKH P +KDDG++MHPR SFKAFLEVVK+RSLPW + EMDAIHSLQLILR+ S
Sbjct: 361 AEIRWGGAKHEPGEKDDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAS 420
Query: 571 FRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWN 629
++AE + + ++A+L DL+L G+ EL +V EMVRLIETA+ PIFAVDV G VNGWN
Sbjct: 421 NKEAEEGDVEGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWN 480
Query: 630 AKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENR 689
K+A+LTGL+V++A+G + LV E V+ +L AL+G E++NV+ +++T G +
Sbjct: 481 TKIADLTGLAVDKAIGTHFLA-LVEDSSAEAVNKMLELALQGNEERNVQFEIKTHGLRSE 539
Query: 690 KKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPP 749
+ ++VNAC+S+D N+VGVCF+ QD+T QK +MDKF I+GDY+AIV +PN LIPP
Sbjct: 540 SAPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLIPP 599
Query: 750 IFASDE 755
IF +DE
Sbjct: 600 IFGTDE 605
>gi|345424282|gb|AEN85245.1| phytochrome A, partial [Coincya monensis]
gi|345424284|gb|AEN85246.1| phytochrome A, partial [Coincya monensis]
gi|345424288|gb|AEN85248.1| phytochrome A, partial [Coincya monensis]
Length = 599
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/600 (56%), Positives = 436/600 (72%), Gaps = 34/600 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSL G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N D E +T
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 374 ---RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLL 404
RLW F + +N E++L +Q+ EK++LRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 405 CDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG 464
CDML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG+TP+E + +I WL H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKAWKLGITPSEFHLHEIASWLCESHT 300
Query: 465 DSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 524
DSTGLSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 525 DKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVV 583
DKDD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++FRD E ++ + ++
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELT L V+EA
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTDLPVDEA 480
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
+GK L+ LV EIV +L +AL G E++NV+ +++T + + +VVNAC+S+
Sbjct: 481 IGKHLL-TLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|89331083|emb|CAJ80908.1| phytochrome A [Cordylanthus ramosus]
Length = 609
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/609 (56%), Positives = 444/609 (72%), Gaps = 33/609 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV++E +P L+PY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + VIQD L L L GSTLRAPH CH QYM +M SIASL ++V+
Sbjct: 121 IKNKVRMICDCRANHVKVIQDNNLPFDLTLCGSTLRAPHSCHLQYMESMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRS----TTRLWA--------------------------FGLQLNMELQL 388
+N +E+ S RLW F + +N E++L
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 389 ASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPT 448
+Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGA L ++ K Y LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKSKKYRLGMTPS 300
Query: 449 ETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRS 508
+ QI+DIV WL YH DSTGLSTDSL DAG+P A LGDAVCGMA IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 509 HTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILR 568
HTA EI+WGGAKH P DKDDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPSDKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 569 DSF-RDAEASN-SKAVVNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
+S ++AE + ++A+L DL+L G EL ++ EMVRLIETA+ PIFAVD+ G VN
Sbjct: 421 NSSNKEAEERDVGGKEIHARLNDLQLDGKQELEALTSEMVRLIETASVPIFAVDMDGLVN 480
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWN K+A+LTGL V++A+G L+ LV E V+ +L AL+G E++NV+ ++T G
Sbjct: 481 GWNTKIADLTGLLVDKAIGMHLLA-LVEDSSAEAVNKMLELALQGNEEQNVQFDIKTHGP 539
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
+ + ++VNAC+S+D N+VGVCF+ QD+T QK +MDKF I+GDY+AIV +PN L
Sbjct: 540 RSESGPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQL 599
Query: 747 IPPIFASDE 755
IPPIF SDE
Sbjct: 600 IPPIFGSDE 608
>gi|89330104|emb|CAJ80964.1| phytochrome A [Pedicularis kerneri]
Length = 612
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/612 (56%), Positives = 445/612 (72%), Gaps = 36/612 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV +++D EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV++E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + VIQD+ L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRSTT-------RLWA--------------------------FGLQLNME 385
+N +E+ S++ RLW F + +N E
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKE 240
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
++L +Q EK++LRTQTLLCDMLLRD+P GIV++SP++MDLVKC+GA L ++ K Y LG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TP++ QI+DIV WL YH DSTGLSTDSL DAG+P A LGDAVCGMA IT D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTA EI+WGGAKH P +KDDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 566 ILR-DSFRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHG 623
ILR S ++AE ++ ++A+L DL+L G+ EL +V EMVRLIETA+ PIFAV V G
Sbjct: 421 ILRIASNKEAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 624 CVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRT 683
VNGWN K+A+LTGL V++AMG V LV E V+ +L AL+G E++NV+ + +T
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVA-LVDDSSAEAVNKMLELALQGNEEQNVQFEFKT 539
Query: 684 FGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSP 743
G + V +VVNAC+S+D NIVGVCF+ QD+T QK +MDKF I+GDYKAIV +P
Sbjct: 540 HGPRSESSPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYKAIVQNP 599
Query: 744 NPLIPPIFASDE 755
N LIPPIF +DE
Sbjct: 600 NQLIPPIFGTDE 611
>gi|89331055|emb|CAJ80894.1| phytochrome A [Castilleja crista-galli]
Length = 609
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/609 (55%), Positives = 446/609 (73%), Gaps = 33/609 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV++E +P L+PY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + VIQD+ L L L GS LRAPH CH QYM NM SIASL ++V+
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRS----TTRLWA--------------------------FGLQLNMELQL 388
+N +E+ S +LW F + +N E++L
Sbjct: 181 VNEGNEDGPDSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 389 ASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPT 448
+Q+ EK++LRTQTLLCDMLLRD+P GIV+QSP++MDLVKCDGA L ++ K Y LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILIHKTKKYRLGMTPS 300
Query: 449 ETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRS 508
+ QI+DIV WL YH DSTGLSTDSL DAG+P A LGDAVCGMA IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 509 HTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILR 568
HTA I+WGGAKH P+DKDDG++MHPRSSFKAFL+VVK+RSLPW + EMDAIHSLQLILR
Sbjct: 361 HTASAIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 569 DSF-RDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVN 626
+S ++AE + + ++A+L DL+L G EL +V EMVRLIETA+ PIFAVDV G VN
Sbjct: 421 NSSNKEAEKRDVEGKEIHARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDGHVN 480
Query: 627 GWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGA 686
GWN K+A+LTGL V++A+G+ + LV E V+ +L AL+G E++NV+ +++T G
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFLA-LVEDSSAEAVNKMLELALQGNEEQNVQFEIKTHGP 539
Query: 687 ENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPL 746
+ + ++VNAC+S+D N+VGVCF+ QDVT QK +MDKF I+GDY+AIV +PN L
Sbjct: 540 RSESHPISLIVNACASRDVKENVVGVCFIAQDVTTQKSMMDKFTRIEGDYRAIVQNPNQL 599
Query: 747 IPPIFASDE 755
IPPIF +DE
Sbjct: 600 IPPIFGTDE 608
>gi|345424368|gb|AEN85288.1| phytochrome A, partial [Eruca vesicaria]
Length = 593
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/596 (57%), Positives = 437/596 (73%), Gaps = 32/596 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDE-EAVGGRSTTRL 375
+QDE L L L GSTLRAPH CH QYMANM SIASL +AV++N DE E+ + RL
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDEPESATPQKRKRL 180
Query: 376 WA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 409
W F + +N E+++ +Q+ EK++LRTQTLLCDML+
Sbjct: 181 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDMLM 240
Query: 410 RDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGL 469
RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL YH DSTGL
Sbjct: 241 RDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTGL 300
Query: 470 STDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 529
STDSL DAG+P+ LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH P+DKDD
Sbjct: 301 STDSLHDAGFPR--DLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDDA 358
Query: 530 QRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRD-AEASN-SKAVVNAQL 587
+RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D EAS + ++ ++L
Sbjct: 359 RRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGGEASEVNTNIIYSKL 418
Query: 588 VDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKS 647
DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGLSV+EA+GK
Sbjct: 419 NDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGKH 478
Query: 648 LVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTN 707
L+ LV E+V +L +AL+G E++NV+ ++T + + VVNAC+SKD
Sbjct: 479 LL-TLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASKDLHE 537
Query: 708 NIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF +GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 538 NVVGVCFVAHDLTGQKTVMDKFTRKEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 593
>gi|345424580|gb|AEN85394.1| phytochrome A, partial [Stanleya pinnata]
gi|345424584|gb|AEN85396.1| phytochrome A, partial [Stanleya pinnata]
Length = 597
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 441/599 (73%), Gaps = 34/599 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + A++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVAMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FH+D+HGEVV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH QYM NM SIASL +AV+ N D E STT
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHRCHLQYMVNMDSIASLVMAVV-NEEDGEGDAPDSTTPQK 179
Query: 374 --RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLLC 405
RLW F + +N E++L +Q+ EK++LRTQTLLC
Sbjct: 180 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 239
Query: 406 DMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGD 465
DML+RD+P GIV+QSP+IMDLVKCDGAAL Y+ K + LG+TP+E +++I WL H D
Sbjct: 240 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCENHTD 299
Query: 466 STGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 525
STGLSTDSL DAG+P+A LGD+VCGMA I+ +D +FWFRSHTA E++WGGAKH+P+D
Sbjct: 300 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHNPDD 359
Query: 526 KDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVN 584
+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D + ++ + +++
Sbjct: 360 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGDTTDVNTKIIH 419
Query: 585 AQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAM 644
++L DL++ G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+
Sbjct: 420 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 479
Query: 645 GKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKD 704
GK L+ +V EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+D
Sbjct: 480 GKHLL-TVVEDSSVEIVKRMLENALEGIEEQNVQFEIKTHLSSADAGPISLVVNACTSRD 538
Query: 705 YTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE CSEWN
Sbjct: 539 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 597
>gi|89330106|emb|CAJ80965.1| phytochrome A [Pedicularis tuberosa]
Length = 612
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/612 (56%), Positives = 446/612 (72%), Gaps = 36/612 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV +++D EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
CDT+V+ V +LTGYDRVM+Y+FH+D+HGEV++E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + VIQD+ L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRSTT-------RLWA--------------------------FGLQLNME 385
+N +E+ S++ RLW F + +N E
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKE 240
Query: 386 LQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGV 445
++L +Q EK++LRTQTLLCDMLLRD+P GIV++SP++MDLVKC+GA L ++ K Y LG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 446 TPTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFW 505
TP++ QI+DIV WL YH DSTGLSTDSL DAG+P A LGDAVCGMA IT D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 506 FRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQL 565
FRSHTA EI+WGGAKH P +KDDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 566 ILRD-SFRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHG 623
ILR+ S ++AE ++ ++A+L DL+L G+ EL +V EMVRLIETA+ PIFAV V G
Sbjct: 421 ILRNASNKEAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 624 CVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRT 683
VNGWN K+A+LTGL V++AMG V LV E V+ +L AL+G E++NV+ + +T
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVA-LVDDSSAEAVNKMLELALQGNEEQNVQFEFKT 539
Query: 684 FGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSP 743
G + V +VVNAC+S+D NIVGVCF+ QD+T QK +MDKF I+GDY+AIV +P
Sbjct: 540 HGPRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNP 599
Query: 744 NPLIPPIFASDE 755
N LIPPIF +DE
Sbjct: 600 NQLIPPIFGTDE 611
>gi|315377359|gb|ADU05517.1| phytochrome A [Biscutella auriculata]
Length = 599
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/600 (58%), Positives = 442/600 (73%), Gaps = 34/600 (5%)
Query: 197 DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVM 256
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 257 VYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCV 316
Y+FHED+HGEVV+E +P LEPY GLHYPATDIPQASRFLF +N+VRMIVDC+A + V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCNAKHVRV 120
Query: 317 IQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT--- 373
+QDE L L L GSTLRAPH CH+QYMANM SIASL +AV++N DEE STT
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHSQYMANMDSIASLVMAVVVNEEDEEGDTPDSTTQPL 180
Query: 374 ---RLWA--------------------------FGLQLNMELQLASQLSEKHVLRTQTLL 404
RLW F + +N E++L +Q+ EK++LRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 405 CDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHG 464
CDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL YH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 465 DSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 524
DSTGLSTDSL DAG+P+A LGDAVCGMA I+ +D + WFRSHTA E++WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISPKDMIIWFRSHTAGEVRWGGAKHDPD 360
Query: 525 DKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVV 583
D+DD +RMHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 584 NAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEA 643
+++L +L+L G+ EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL VEEA
Sbjct: 421 HSKLNELKLDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVEEA 480
Query: 644 MGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSK 703
+GK L+ LV EIV +L +AL+G E++NV+ +++T + + +VVNAC+S+
Sbjct: 481 IGKHLLA-LVEDSSVEIVKRMLQNALQGTEEQNVQFEIKTQLSRADAGPISLVVNACASR 539
Query: 704 DYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D N+VGVCFV D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +DE C+EWN
Sbjct: 540 DLQENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|89330120|emb|CAJ80972.1| phytochrome A [Rhinanthus minor]
Length = 612
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/612 (55%), Positives = 443/612 (72%), Gaps = 36/612 (5%)
Query: 179 TGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLL 238
+GKPFYAI+HRV ++ID EP + + ++ AGA+QS KLA +AI++LQ+L GG I+ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERL 60
Query: 239 CDTVVESVRQLTGYDRVMVYRFHEDEHGEVVAESKRPDLEPYFGLHYPATDIPQASRFLF 298
C+T+V+ V +LTGYDRVM Y+FHED+HGEV+ E +P LEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 299 KQNRVRMIVDCHATPLCVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVI 358
+N+VRMI DC A + VIQDE L L L GSTLRAPH CH QYM NM SIASL ++V+
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 359 INGNDEEAVGGRST------TRLWA--------------------------FGLQLNMEL 386
+N +EEA + RLW F + +N E+
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 387 QLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVT 446
++ +Q+ EK++LRTQTLLCDMLLRD+P G+V+QSP++MDLVKCDG+ L ++ + Y LG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGMVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 447 PTETQIKDIVEWLLTYHGDSTGLSTDSLADAGYPKAATLGDAVCGMAVAYITKRDFLFWF 506
P++ QI+DIV WL YH DSTGLSTDSL DAG+P A LGD VCGMA IT RD+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 507 RSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLI 566
RSHTA EI+WGGAKH ++DDG++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 567 LRD--SFRDAEASNSKAV-VNAQLVDLELQGVDELSSVAREMVRLIETATAPIFAVDVHG 623
LR+ S E + + V + A+L +L++ GV EL +V EMVRLIETA+ PIFAV V G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 624 CVNGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDNLLHHALKGEEDKNVEIKLRT 683
VNGWN K+A+LTGL V++A+G + LV + E V +L AL+G+E++NV +++T
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIKT 539
Query: 684 FGAENRKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTDQKLVMDKFIHIQGDYKAIVHSP 743
G + + ++VNAC+S+D+ N+VGVCF+ QD+T QK VMDKF I+GDY+AIV +P
Sbjct: 540 HGPNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNP 599
Query: 744 NPLIPPIFASDE 755
NP+IPPIF +DE
Sbjct: 600 NPVIPPIFGTDE 611
>gi|345424568|gb|AEN85388.1| phytochrome A, partial [Schouwia purpurea]
Length = 593
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/588 (58%), Positives = 433/588 (73%), Gaps = 34/588 (5%)
Query: 208 LSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRQLTGYDRVMVYRFHEDEHGE 267
++ AGA+QS KLA +AI++LQSLP G ++ LCDT+V+ V +LTGYDRVM Y+FH+D+HGE
Sbjct: 8 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGE 67
Query: 268 VVAESKRPDLEPYFGLHYPATDIPQASRFLFKQNRVRMIVDCHATPLCVIQDEGLMQPLC 327
VV+E +P LEPY GLHYPATDIPQA+RFLF +N+VRMIVDC+A + V QDE L L
Sbjct: 68 VVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVFQDEKLSFDLT 127
Query: 328 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNDEEAVGGRSTT-----RLWA----- 377
L GSTLRAPH CH QYMANM SIASL +AV++N D E STT RLW
Sbjct: 128 LCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPGSTTPQKRKRLWGLVVCH 187
Query: 378 ---------------------FGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGI 416
F + +N E++L +Q+ EK++LRTQTLLCDML+RD+P GI
Sbjct: 188 NTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDMLMRDAPLGI 247
Query: 417 VTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTETQIKDIVEWLLTYHGDSTGLSTDSLAD 476
V+QSP+IMDLVKCDGAAL Y+ K + LG TP+E +++I WL YH DSTGLSTDSL D
Sbjct: 248 VSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHTDSTGLSTDSLHD 307
Query: 477 AGYPKAATLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 536
AG+P+A LGD+VCGMA I+ D +FWFRSHTA E++WGGAKH P+DKDD +RMHPRS
Sbjct: 308 AGFPRALALGDSVCGMAAVRISSTDMIFWFRSHTAGEVRWGGAKHDPDDKDDARRMHPRS 367
Query: 537 SFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEASN-SKAVVNAQLVDLELQGV 595
SFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D E ++ + +++++L DL++ G+
Sbjct: 368 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTNIIHSKLNDLKIDGI 427
Query: 596 DELSSVAREMVRLIETATAPIFAVDVHGCVNGWNAKVAELTGLSVEEAMGKSLVHDLVYK 655
EL +V EMVRLIETAT PI AVD G VNGWN K+AELTGL V+EA+GK L+ LV
Sbjct: 428 QELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKHLL-TLVED 486
Query: 656 EYEEIVDNLLHHALKGEEDKNVEIKLRTFGAENRKKAVFVVVNACSSKDYTNNIVGVCFV 715
EIV +L +AL+G E++NV+ +++T + + +VVNAC+SKD N+VGVCFV
Sbjct: 487 SSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASKDLHENVVGVCFV 546
Query: 716 GQDVTDQKLVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWN 763
D+T QK VMDKF I+GDYKAI+ +PNPLIPPIF +D CSEWN
Sbjct: 547 AHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDVG-WCSEWN 593
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,620,436,345
Number of Sequences: 23463169
Number of extensions: 693568259
Number of successful extensions: 1844535
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5623
Number of HSP's successfully gapped in prelim test: 33138
Number of HSP's that attempted gapping in prelim test: 1783293
Number of HSP's gapped (non-prelim): 57083
length of query: 1111
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 957
effective length of database: 8,745,867,341
effective search space: 8369795045337
effective search space used: 8369795045337
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 83 (36.6 bits)