BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037300
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P83326|PMEI_ACTDE Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2
Length = 185
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 16 ENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLN 75
EN LI C KT P LC++ L S P S+ D+KGL ++ A A T + + L N
Sbjct: 33 ENHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTN 92
Query: 76 ETKDKTMRNCLDVCFQVYDLAIYEIPTAIKYLESGDYDSAVQYANDGIIESDTCEKIPKS 135
+ D ++ + C + Y AI + A ++L SGDY+S YA+ + TCE +
Sbjct: 93 QATDPKLKGRYETCSENYADAIDSLGQAKQFLTSGDYNSLNIYASAAFDGAGTCEDSFEG 152
Query: 136 P------LTDRNNGLTNLCTIALDMINLF 158
P L + L +LC I L + NL
Sbjct: 153 PPNIPTQLHQADLKLEDLCDIVLVISNLL 181
>sp|Q9LUV1|PMEI2_ARATH Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1
SV=1
Length = 173
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Query: 1 MSQLNMLLKVGVRGEENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESAS 60
MS L + G + I+A C K C ++S+P +SGAD++ LA+I SA
Sbjct: 11 MSSLMFFVMTGSLNAQVADIKAICGKAKNQSFCTSYMKSNPKTSGADLQTLANITFGSAQ 70
Query: 61 AYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDLAIYEIPTAIKYLESGDYDSAVQYAN 120
++ + +++ L+ + TM+ C Q Y AI + A + L SGD +
Sbjct: 71 TSASEGFRKIQSLVKTATNPTMKKAYTSCVQHYKSAISSLNDAKQSLASGDGKGLNIKVS 130
Query: 121 DGIIESDTCEK----IPKSPLTDRNNG-LTNLCTIALDMINLF 158
+ TCE+ P +N+G N+C I L + N+
Sbjct: 131 AAMEGPSTCEQDMADFKVDPSAVKNSGDFQNICGIVLVISNMM 173
>sp|Q8GT41|PLA1_PLAAC Putative invertase inhibitor OS=Platanus acerifolia PE=1 SV=1
Length = 179
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 18 DLIEATCRKTSYP------DLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVK 71
D+++ TC+K + D C+K+L + P S AD++GL I A + + +
Sbjct: 25 DIVQGTCKKVAQRSPNVNYDFCVKSLGADPKSHTADLQGLGVISANLAIQHGSKIQTFIG 84
Query: 72 KLLNETKDKTMRNCLDVCFQVYDLAIYEIPTAIKYLESGDYDSAVQYANDGIIESDTCEK 131
++L D ++ L+ C +Y A + AI +S DY SA + + +S TCE
Sbjct: 85 RILKSKVDPALKKYLNDCVGLYADAKSSVQEAIADFKSKDYASANVKMSAALDDSVTCED 144
Query: 132 IPK------SPLTDRNNGLTNLCTIALDMINLF 158
K SP+T N L I+L + L
Sbjct: 145 GFKEKKGIVSPVTKENKDYVQLTAISLAITKLL 177
>sp|O49603|CVIF2_ARATH Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis
thaliana GN=C/VIF2 PE=1 SV=1
Length = 180
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 10 VGVRGEENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQ 69
+ + +IE+TC+ T+Y C+ L+S P S AD KGLA I++ T
Sbjct: 21 ISAKSNTTTIIESTCKTTNYYKFCVSALKSDPRSPTADTKGLASIMVGVGMTNATSTANY 80
Query: 70 VKKLLNET-KDKTMRNCLDVCFQVYDLAIYEIPTAIKYLESGDYDSA 115
+ L+ T KD ++ L C + Y LA + I+ L+ YD A
Sbjct: 81 IAGNLSATVKDTVLKKVLQDCSEKYALAADSLRLTIQDLDDEAYDYA 127
>sp|F4HWQ8|CVIF1_ARATH Cell wall / vacuolar inhibitor of fructosidase 1 OS=Arabidopsis
thaliana GN=C/VIF1 PE=1 SV=1
Length = 205
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 16 ENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLN 75
E +IE TC++T +LC+ L S P S AD GLA I+++ T ++ L
Sbjct: 22 EGSIIEPTCKETPDFNLCVSLLNSDPRGSSADTSGLALILIDKIKGLATKTLNEINGLYK 81
Query: 76 ETKDKTMRNCLDVCFQVYDLAI-YEIPTAIKYLESGDYDSAVQYANDGIIES 126
K ++ LD C + Y + ++P AI+ + G ++ DG+I++
Sbjct: 82 --KRPELKRALDECSRRYKTILNADVPEAIEAISKG----VPKFGEDGVIDA 127
>sp|Q9LUL8|PME26_ARATH Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis
thaliana GN=PME26 PE=2 SV=1
Length = 968
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 24 CRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMR 83
C T YP C+ ++ P S+ D + L + L+ N KKL ET D+ ++
Sbjct: 275 CSVTRYPASCVSSISKLPSSNTTDPEALFRLSLQVVINELNSIAGLPKKLAEETDDERLK 334
Query: 84 NCLDVCFQVYDLAI----------YEIPTAIKYLESGDYDSAVQYANDGIIESDTC 129
+ L VC V++ AI E+ K L+S D + + + + DTC
Sbjct: 335 SSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKSSTIDEIQTWLSAAVTDHDTC 390
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 19 LIEATCRKTSYPDLCIKTLRSSPGS-SGADVKGLAHIILESASAYCNDTYEQVKKLLNET 77
++ C T+YP CI ++ P S + D K L + L+ N KKL ET
Sbjct: 458 VLRTVCNVTNYPASCISSISKLPLSKTTTDPKVLFRLSLQVTFDELNSIVGLPKKLAEET 517
Query: 78 KDKTMRNCLDVCFQVYDLAIYEIPTAIKYLE 108
D+ +++ L VC V+DLA+ + I L+
Sbjct: 518 NDEGLKSALSVCADVFDLAVDSVNDTISSLD 548
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 20 IEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKD 79
++ C T+YP C ++ P S+ D + + + L+ N E KKL ET D
Sbjct: 77 LKTVCSVTNYPVSCFSSISKLPLSNTTDPEVIFRLSLQVVIDELNSIVELPKKLAEETDD 136
Query: 80 KTMRNCLDVCFQVYDLAIYEIPTAIKYLESGD 111
+ +++ L VC + DLAI + + +E D
Sbjct: 137 EGLKSALSVCEHLLDLAIDRVNETVSAMEVVD 168
>sp|Q9FK05|PME61_ARATH Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis
thaliana GN=PME61 PE=1 SV=1
Length = 587
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 20 IEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKD 79
I TC K+ YP+LCI TL PGS AD L HI N T ++ K L +
Sbjct: 75 ISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISF-------NATLQKFSKALYTSST 127
Query: 80 KT-------MRNCLDVCFQVYDLAIYEIPTAIK--YLESGD--YDSAVQYANDGIIESDT 128
T +R+ D C ++ D ++ + A+ + SGD + + + + + DT
Sbjct: 128 ITYTQMPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDESHSDVMTWLSSAMTNHDT 187
Query: 129 C 129
C
Sbjct: 188 C 188
>sp|P83948|PME3_CITSI Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1
Length = 584
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 20/157 (12%)
Query: 19 LIEATCRKTSYPDLCIKTLRSSPGSSG--ADVKGLAHIILESASAYCNDTYEQVKKLLNE 76
+++++C T YPDLC + + P +S K + + L + Y ++KLL
Sbjct: 68 ILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKR 127
Query: 77 TK-DKTMRNCLDVCFQVYDLAIYEIPTAIKYLES-GDYDSAVQYAND-------GIIESD 127
T K + L C + D + E+ A++ LE + S Q+A+D +
Sbjct: 128 TNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQG 187
Query: 128 TC---------EKIPKSPLTDRNNGLTNLCTIALDMI 155
TC K + L+D + +C+ AL MI
Sbjct: 188 TCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
>sp|O04886|PME1_CITSI Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1
Length = 584
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 20/157 (12%)
Query: 19 LIEATCRKTSYPDLCIKTLRSSPGSSG--ADVKGLAHIILESASAYCNDTYEQVKKLLNE 76
+++++C T YPDLC + + P +S K + + L + Y ++KLL
Sbjct: 68 ILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKR 127
Query: 77 TK-DKTMRNCLDVCFQVYDLAIYEIPTAIKYLES-GDYDSAVQYAND-------GIIESD 127
T K + L C + D + E+ A++ LE + S Q+A+D +
Sbjct: 128 TNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQG 187
Query: 128 TC---------EKIPKSPLTDRNNGLTNLCTIALDMI 155
TC K + L+D + +C+ AL MI
Sbjct: 188 TCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
>sp|Q42534|PME2_ARATH Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2
Length = 587
Score = 35.0 bits (79), Expect = 0.18, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 19 LIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETK 78
++++ C T YP+LC + ++ G K + L + Y VKKL+ + K
Sbjct: 61 ILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRK 120
Query: 79 DKTMR--NCLDVCFQVYDLAIYEIPTAIKYL 107
T R L C + D + E+ A++ L
Sbjct: 121 GLTPREVTALHDCLETIDETLDELHVAVEDL 151
>sp|O49006|PME3_ARATH Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana
GN=PME3 PE=2 SV=2
Length = 592
Score = 34.7 bits (78), Expect = 0.25, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 21/157 (13%)
Query: 19 LIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETK 78
++ ++C T YP+LCI + ++ G K + + Y VKKL+ + K
Sbjct: 58 VLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRK 117
Query: 79 DKTMR--NCLDVCFQVYDLAIYEIPTAIKYL-----------ESGDYDSAVQYAN----- 120
T R L C + D + E+ ++ L +GD + + A
Sbjct: 118 GLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQET 177
Query: 121 --DGIIESDTCEKIPKSPLTDRNNGLTNLCTIALDMI 155
DG D +++ K+ L + + + ++C+ AL MI
Sbjct: 178 CLDGFSHDDADKQVRKALLKGQIH-VEHMCSNALAMI 213
>sp|Q43867|PME1_ARATH Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1
Length = 586
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 20 IEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKD 79
++A C T +P+ CI ++ P S+ D + L + L+ + + +KL ET+D
Sbjct: 73 LKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPEKLSKETED 132
Query: 80 KTMRNCLDVC 89
+ +++ L VC
Sbjct: 133 ERIKSALRVC 142
>sp|Q9ZR39|U2A2A_NICPL Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia
GN=U2AF65A PE=2 SV=1
Length = 555
Score = 32.7 bits (73), Expect = 0.96, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 30 PDLCIKTLRSSPGSSGA-------DVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTM 82
P+L + + S+PGSSG V GL + ES +++ Q++ + KD+
Sbjct: 320 PNLNLAAVGSTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRG-FDLVKDRET 378
Query: 83 RNCLDVCFQVY-DLAIYEIP-TAIKYLESGDYDSAVQYANDGIIESD 127
N F VY D+++ +I A+ ++ GD V+ AN G + +
Sbjct: 379 GNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPN 425
>sp|Q3E8Z8|PME28_ARATH Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis
thaliana GN=PME28 PE=2 SV=1
Length = 732
Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 20 IEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKD 79
I+ C T Y + C TLR + +D L + +D ++ + ++ KD
Sbjct: 57 IKDVCAPTDYKETCEDTLRKDAKDT-SDPLELVKTAFNATMKQISDVAKKSQTMIELQKD 115
Query: 80 KTMRNCLDVCFQVYDLAIYEIPTAIKYL 107
+ LD C ++ D AI E+ + + L
Sbjct: 116 PRAKMALDQCKELMDYAIGELSKSFEEL 143
>sp|Q9M3B0|PME34_ARATH Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis
thaliana GN=PME34 PE=2 SV=1
Length = 598
Score = 32.0 bits (71), Expect = 1.8, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 11 GVRGEENDLIEATCRKTSYPDLCIKTLRSSPGS-SGADVKGLAHIILESASAYCNDTYEQ 69
G+ + + I C T +P+LC+ +L PGS + + K L H+ + + +
Sbjct: 78 GLARKPSQAISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYS 137
Query: 70 VKKLLNETKDKTMRNCLDVCFQVYDLAIYEIPTAI 104
L R+ D C ++ D ++ + A+
Sbjct: 138 SASLSFVDMPPRARSAYDSCVELLDDSVDALSRAL 172
>sp|Q7V9L5|CLPX_PROMA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Prochlorococcus marinus (strain SARG / CCMP1375 /
SS120) GN=clpX PE=3 SV=1
Length = 450
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 61 AYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDLAIYEIPTAIK 105
++C + EQV+KL+ C+D+C ++ D + E P+ +K
Sbjct: 11 SFCGKSQEQVRKLIAGPGVYICDECIDLCNEILDEELLENPSKVK 55
>sp|A2SPE0|MPTA_METLZ GTP cyclohydrolase MptA OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=mptA PE=3 SV=1
Length = 311
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 13 RGEENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESA---SAYCNDTYEQ 69
RG+E+ ++ A + + + C++ + S+ D+ G HI + S + +D Y +
Sbjct: 238 RGDESYVVMAAHKNARFVEDCVREMARRVVSTFGDLPGDTHITIRQTNEESIHQHDAYAE 297
Query: 70 VKKLLNETKDK 80
K L E +D+
Sbjct: 298 RKATLAELRDE 308
>sp|F1MDL2|INTU_BOVIN Protein inturned OS=Bos taurus GN=INTU PE=3 SV=2
Length = 933
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 23 TCRKTSYPDLCIKTLRSSPGSSGADVKGL 51
TCR+T + D +KT + SP SG GL
Sbjct: 692 TCRRTLFSDYSLKTRKPSPSRSGGPDSGL 720
>sp|C5CHW7|ARGC_KOSOT N-acetyl-gamma-glutamyl-phosphate reductase OS=Kosmotoga olearia
(strain TBF 19.5.1) GN=argC PE=3 SV=1
Length = 339
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query: 7 LLKVGVRGEENDL-IEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCND 65
+++VG+ G +E T++PD+ I T SS +G + + L+ N+
Sbjct: 1 MIRVGIIGATGYTGLELVRILTNHPDVKI-TFLSSRSFAGKKLNDVYPFSLK------NE 53
Query: 66 TYEQVKKLLNETKDKTMRNCLDVCFQVYDLAI-YEIPTAIKYLESGDYDSAVQYANDGII 124
T E++ +K +NC DV F + YEI +K + D + ++ + +
Sbjct: 54 TLEEIDP------EKISKNC-DVVFTALPAGVSYEIARKLKDVRIIDLGADFRFDDPAVY 106
Query: 125 ESDTCEKIPKSPLTDRNNGLTNL 147
E +K+P T+R GLT L
Sbjct: 107 EEWYSKKLPDYDPTERVYGLTEL 129
>sp|A3LWM9|SEY1_PICST Protein SEY1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=SEY1 PE=3 SV=2
Length = 827
Score = 30.0 bits (66), Expect = 6.8, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 39 SSPGSSGADVKGLAHIILE-----------SASAYCNDTYEQVKKLLNETKDKTMRNCLD 87
++PG S D + L ++++ SAS Y YEQ K LL E ++ R D
Sbjct: 353 NTPGISTLDYQDLGLLLVDLRSDTLENYDLSASRYTKSVYEQRKDLLKEKLNEKFREFFD 412
Query: 88 VCFQ-VYDLAIYEIPTAIKYLESGDYD 113
+ + + ++ E T I L+ ++D
Sbjct: 413 AHIKHLSEKSVKEFETNIVGLKGKNFD 439
>sp|Q8L7Q7|PME64_ARATH Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis
thaliana GN=PME64 PE=2 SV=2
Length = 602
Score = 29.6 bits (65), Expect = 7.4, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Query: 20 IEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCN--DTYEQVKKLLNET 77
I C T +PD C+ +L S PG D K + I + +Y N +++ +L+ +
Sbjct: 93 IRLACNATRFPDHCVASL-SKPGQVPPDPKPVQIIHSAISVSYENLKSGQSKIQSILDSS 151
Query: 78 K-DKTMRNCLDVCFQVYDLAIYEIPTAIKYLESGDYDSA 115
++ N +C ++ + + + + SGD A
Sbjct: 152 AGNRNRTNIATICLEILSYSQHRTESTDIAVTSGDIKDA 190
>sp|Q9XSZ1|GHR_PAPAN Growth hormone receptor OS=Papio anubis GN=GHR PE=2 SV=1
Length = 638
Score = 29.6 bits (65), Expect = 7.6, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 67 YEQVKKLLNETKDKTMRNCLDVCFQVYDLAI---YEIPTAIKYLESGDYD--SAVQYAND 121
YE K +NETK K M L VY L + YE+ K SG+Y S V Y
Sbjct: 192 YELQYKEVNETKWKMMDPILSTSVPVYSLKVDKEYEVRVRSKRRNSGNYGEFSEVLYVTL 251
Query: 122 GIIESDTCEK 131
+ TCE+
Sbjct: 252 PQMNQFTCEE 261
>sp|P10912|GHR_HUMAN Growth hormone receptor OS=Homo sapiens GN=GHR PE=1 SV=1
Length = 638
Score = 29.6 bits (65), Expect = 8.6, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 67 YEQVKKLLNETKDKTMRNCLDVCFQVYDLAI---YEIPTAIKYLESGDYD--SAVQYAND 121
YE K +NETK K M L VY L + YE+ K SG+Y S V Y
Sbjct: 192 YELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTL 251
Query: 122 GIIESDTCEK 131
+ TCE+
Sbjct: 252 PQMSQFTCEE 261
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,934,078
Number of Sequences: 539616
Number of extensions: 2259164
Number of successful extensions: 6399
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 6382
Number of HSP's gapped (non-prelim): 39
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)