Query 037300
Match_columns 159
No_of_seqs 121 out of 1005
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 10:51:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037300.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037300hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01614 PME_inhib pectineste 100.0 3.7E-32 7.9E-37 199.5 15.9 144 15-158 27-177 (178)
2 smart00856 PMEI Plant invertas 100.0 2.6E-32 5.5E-37 194.5 14.5 140 15-154 2-148 (148)
3 PF04043 PMEI: Plant invertase 100.0 3.5E-30 7.5E-35 183.9 13.6 140 15-154 2-152 (152)
4 PLN02314 pectinesterase 100.0 2.8E-27 6E-32 199.7 15.9 143 16-158 69-233 (586)
5 PLN02468 putative pectinestera 100.0 3.1E-27 6.8E-32 198.5 15.4 143 16-158 63-216 (565)
6 PLN02484 probable pectinestera 99.9 3.4E-27 7.4E-32 198.9 14.9 143 16-158 72-226 (587)
7 PLN02313 Pectinesterase/pectin 99.9 4.9E-26 1.1E-30 192.1 15.3 143 16-158 58-219 (587)
8 PLN02301 pectinesterase/pectin 99.9 3.6E-25 7.7E-30 185.1 15.5 145 14-158 47-200 (548)
9 PLN02708 Probable pectinestera 99.9 4.4E-25 9.5E-30 185.2 15.4 144 15-158 42-195 (553)
10 PLN02995 Probable pectinestera 99.9 1.1E-24 2.3E-29 182.3 15.2 141 18-158 35-190 (539)
11 PLN02217 probable pectinestera 99.9 8.2E-25 1.8E-29 185.7 14.5 140 18-158 54-207 (670)
12 PLN02745 Putative pectinestera 99.9 1.1E-24 2.3E-29 183.9 14.7 142 15-158 77-231 (596)
13 PLN02990 Probable pectinestera 99.9 1.3E-24 2.9E-29 182.8 15.2 141 16-158 52-209 (572)
14 PLN02506 putative pectinestera 99.9 1.6E-24 3.5E-29 181.0 14.3 144 15-158 32-191 (537)
15 PLN02416 probable pectinestera 99.9 4.5E-24 9.9E-29 178.6 14.8 144 15-158 36-191 (541)
16 PLN02698 Probable pectinestera 99.9 4.9E-24 1.1E-28 177.0 14.2 141 14-158 19-176 (497)
17 PLN02197 pectinesterase 99.9 1.2E-23 2.6E-28 177.1 15.0 138 18-158 39-190 (588)
18 PLN02713 Probable pectinestera 99.9 6.6E-24 1.4E-28 178.4 12.7 139 16-157 31-188 (566)
19 PLN03043 Probable pectinestera 99.9 5.3E-23 1.1E-27 172.2 13.6 136 21-157 3-156 (538)
20 PLN02488 probable pectinestera 99.7 1.6E-17 3.4E-22 137.3 12.4 136 22-157 3-158 (509)
21 PLN02933 Probable pectinestera 99.7 2.2E-17 4.8E-22 137.7 13.2 114 45-158 48-181 (530)
22 PLN02201 probable pectinestera 99.7 2.2E-16 4.7E-21 131.8 11.9 111 47-157 36-162 (520)
23 PLN02170 probable pectinestera 99.5 5.3E-14 1.1E-18 117.4 8.6 117 28-158 58-184 (529)
24 PLN02916 pectinesterase family 99.4 9.5E-13 2.1E-17 109.4 7.8 79 80-158 59-140 (502)
25 PF07870 DUF1657: Protein of u 81.2 8.2 0.00018 22.2 6.7 45 57-101 3-47 (50)
26 TIGR00208 fliS flagellar biosy 70.6 11 0.00023 25.9 4.5 34 90-123 25-58 (124)
27 PRK05685 fliS flagellar protei 66.8 37 0.00081 23.5 6.6 33 90-122 29-61 (132)
28 PF02561 FliS: Flagellar prote 63.8 14 0.0003 25.1 3.9 23 46-68 16-38 (122)
29 KOG4841 Dolichol-phosphate man 63.2 6.5 0.00014 25.4 2.0 26 85-110 66-91 (95)
30 PF08285 DPM3: Dolichol-phosph 58.1 7.5 0.00016 25.4 1.7 27 85-111 62-88 (91)
31 COG1516 FliS Flagellin-specifi 56.8 27 0.00059 24.4 4.3 34 90-123 25-58 (132)
32 PF02953 zf-Tim10_DDP: Tim10/D 55.5 22 0.00048 21.2 3.4 29 77-105 36-64 (66)
33 KOG1733 Mitochondrial import i 47.2 79 0.0017 20.6 7.5 51 54-104 26-84 (97)
34 KOG3470 Beta-tubulin folding c 44.5 96 0.0021 20.8 7.2 62 47-109 14-79 (107)
35 TIGR03504 FimV_Cterm FimV C-te 38.9 56 0.0012 18.1 3.1 26 99-124 2-27 (44)
36 KOG4514 Uncharacterized conser 38.8 1.6E+02 0.0035 21.9 6.8 59 45-108 121-181 (222)
37 PF14346 DUF4398: Domain of un 35.1 1.1E+02 0.0023 19.9 4.5 34 92-125 41-74 (103)
38 PRK09591 celC cellobiose phosp 32.4 1E+02 0.0022 20.5 4.0 27 96-122 20-46 (104)
39 cd00215 PTS_IIA_lac PTS_IIA, P 32.4 1E+02 0.0022 20.2 4.0 27 96-122 15-41 (97)
40 PF02203 TarH: Tar ligand bind 31.9 1.8E+02 0.0038 20.2 9.2 62 56-117 84-147 (171)
41 PF08287 DASH_Spc19: Spc19; I 31.3 1.3E+02 0.0027 21.6 4.6 35 86-120 2-38 (153)
42 PF02255 PTS_IIA: PTS system, 31.1 1.1E+02 0.0025 19.9 4.1 27 96-122 14-40 (96)
43 TIGR00823 EIIA-LAC phosphotran 29.2 1.2E+02 0.0027 19.9 4.0 27 96-122 17-43 (99)
44 PHA00442 host recBCD nuclease 26.6 1.4E+02 0.0031 17.5 3.8 40 56-98 8-51 (59)
45 PF02609 Exonuc_VII_S: Exonucl 26.1 1.4E+02 0.0029 17.0 3.8 22 86-107 22-43 (53)
46 TIGR01280 xseB exodeoxyribonuc 24.7 1.5E+02 0.0033 17.9 3.5 22 86-107 24-45 (67)
47 PF12755 Vac14_Fab1_bd: Vacuol 23.0 2.2E+02 0.0048 18.5 8.1 52 48-99 7-58 (97)
48 PRK00977 exodeoxyribonuclease 22.6 1.7E+02 0.0036 18.4 3.5 39 93-131 12-52 (80)
49 PF06972 DUF1296: Protein of u 21.5 2E+02 0.0043 17.2 3.6 36 65-100 7-42 (60)
50 PF09976 TPR_21: Tetratricopep 20.2 2.9E+02 0.0063 18.7 6.9 46 36-81 37-82 (145)
No 1
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=3.7e-32 Score=199.54 Aligned_cols=144 Identities=36% Similarity=0.663 Sum_probs=137.1
Q ss_pred CchHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Q 037300 15 EENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYD 94 (159)
Q Consensus 15 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~ 94 (159)
++.+.|+.+|++|.||++|+++|.++|++..+|+++|+.++++.+..+++.+.+++.++.++.+++..+.+|++|.++|+
T Consensus 27 ~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~al~~C~~~y~ 106 (178)
T TIGR01614 27 ATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAALSNASDTLDHISKLLLTKGDPRDKSALEDCVELYS 106 (178)
T ss_pred chHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 47799999999999999999999999998888999999999999999999999999999887668999999999999999
Q ss_pred HHHHHHHHHHHHHhcCChhhHHHHHHhhhhchhhccc-CC------CCcccchhHHHHHHHHHHHHHHhcc
Q 037300 95 LAIYEIPTAIKYLESGDYDSAVQYANDGIIESDTCEK-IP------KSPLTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 95 ~a~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d-f~------~spl~~~~~~~~~l~~ial~i~~~l 158 (159)
++++.|+++.+.++.++|+++++|+++|++++++|+| |. ++|+..+++++.+|++|+|+|+++|
T Consensus 107 ~a~~~L~~a~~~l~~~~~~d~~~~ls~a~~~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 107 DAVDALDKALASLKSKDYSDAETWLSSALTDPSTCEDGFEELGGIVKSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHcccchHHHHhccCCCCccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999 97 3579999999999999999999986
No 2
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=100.00 E-value=2.6e-32 Score=194.52 Aligned_cols=140 Identities=36% Similarity=0.661 Sum_probs=132.7
Q ss_pred CchHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Q 037300 15 EENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYD 94 (159)
Q Consensus 15 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~ 94 (159)
+..+.|+.+|++|+||.+|+++|.++|++..+|+.+|+.++++.++.++..+...+..+.++..+|..+.+|++|.++|+
T Consensus 2 ~~~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~~C~~~y~ 81 (148)
T smart00856 2 PTSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISSLLKKTKDPRLKAALKDCLELYD 81 (148)
T ss_pred CHHHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 45688999999999999999999999998889999999999999999999999999999887789999999999999999
Q ss_pred HHHHHHHHHHHHHhcCChhhHHHHHHhhhhchhhccc-CC------CCcccchhHHHHHHHHHHHHH
Q 037300 95 LAIYEIPTAIKYLESGDYDSAVQYANDGIIESDTCEK-IP------KSPLTDRNNGLTNLCTIALDM 154 (159)
Q Consensus 95 ~a~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d-f~------~spl~~~~~~~~~l~~ial~i 154 (159)
.++++|++++..+..++|+++++|+|+|++++++|+| |. ++||...+.++.+|++|+|+|
T Consensus 82 ~a~~~L~~a~~~l~~~~~~d~~~~lsaa~t~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 82 DAVDSLEKALEELKSGDYDDVATWLSAALTDQDTCLDGFEENDDKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHhcCcchHHhHhccCCcchhHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999 96 356899999999999999986
No 3
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.97 E-value=3.5e-30 Score=183.92 Aligned_cols=140 Identities=36% Similarity=0.635 Sum_probs=127.2
Q ss_pred CchHHHHHHccCCCChh-chHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChhHHHHHHHHHHH
Q 037300 15 EENDLIEATCRKTSYPD-LCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNE-TKDKTMRNCLDVCFQV 92 (159)
Q Consensus 15 ~~~~~i~~~C~~t~~~~-~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~-~~~~~~k~al~~C~~~ 92 (159)
+..+.|+.+|++|+||. +|+++|.++|.++..|+++|+.++++.++.++..+..++.++++. .++|..+.+|++|.++
T Consensus 2 s~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C~~~ 81 (152)
T PF04043_consen 2 STSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDCQEL 81 (152)
T ss_dssp --HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHHHHH
T ss_pred chHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHHHHH
Confidence 45789999999999666 999999999877778999999999999999999999999999987 7899999999999999
Q ss_pred HHHHHHHHHHHHHHH--hcCChhhHHHHHHhhhhchhhccc-C--C----CCcccchhHHHHHHHHHHHHH
Q 037300 93 YDLAIYEIPTAIKYL--ESGDYDSAVQYANDGIIESDTCEK-I--P----KSPLTDRNNGLTNLCTIALDM 154 (159)
Q Consensus 93 y~~a~~~L~~a~~~l--~~~~~~~~~~~lsaa~~~~~tC~d-f--~----~spl~~~~~~~~~l~~ial~i 154 (159)
|+.+++.|+++++.+ ..++|+++++|+++|++++++|+| | . ++||...+.++.+|++|+|+|
T Consensus 82 y~~a~~~l~~a~~~l~~~~~~~~~~~~~lsaa~~~~~tC~~~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 152 (152)
T PF04043_consen 82 YDDAVDSLQRALEALNSKNGDYDDARTWLSAALTNQDTCEDGFEEAGSPVKSPLVQRNDNVEKLSSNALAI 152 (152)
T ss_dssp HHHHHHHHHHHHHHH--HHT-HHHHHHHHHHHHHHHHHHHHHC-TTSSS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHHHHHhhC
Confidence 999999999999999 999999999999999999999999 9 3 357999999999999999997
No 4
>PLN02314 pectinesterase
Probab=99.95 E-value=2.8e-27 Score=199.69 Aligned_cols=143 Identities=24% Similarity=0.420 Sum_probs=127.5
Q ss_pred chHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHH
Q 037300 16 ENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDL 95 (159)
Q Consensus 16 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~~ 95 (159)
.+..|+.+|+.|.||++|+++|.+.|.+..+|+++|+++++++++++++.+...+.+|.....+++.+.||+||.|+|++
T Consensus 69 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~~~~~~~k~AL~DC~Elldd 148 (586)
T PLN02314 69 PATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINETNDERLKSALRVCETLFDD 148 (586)
T ss_pred HHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 45699999999999999999999999887789999999999999999999999999987666789999999999999999
Q ss_pred HHHHHHHHHHHHhc---------CChhhHHHHHHhhhhchhhccc-CC--------CCcc----cchhHHHHHHHHHHHH
Q 037300 96 AIYEIPTAIKYLES---------GDYDSAVQYANDGIIESDTCEK-IP--------KSPL----TDRNNGLTNLCTIALD 153 (159)
Q Consensus 96 a~~~L~~a~~~l~~---------~~~~~~~~~lsaa~~~~~tC~d-f~--------~spl----~~~~~~~~~l~~ial~ 153 (159)
++++|++++..|.. ..++|+++|||+|++|++||.| |. .+++ .....++.+|++|+|+
T Consensus 149 Aid~L~~Sl~~l~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNaLA 228 (586)
T PLN02314 149 AIDRLNDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNSLA 228 (586)
T ss_pred HHHHHHHHHHHHhhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998853 2468999999999999999999 96 2343 3444789999999999
Q ss_pred HHhcc
Q 037300 154 MINLF 158 (159)
Q Consensus 154 i~~~l 158 (159)
|++.+
T Consensus 229 Ii~~l 233 (586)
T PLN02314 229 IVSKI 233 (586)
T ss_pred HHhhh
Confidence 99874
No 5
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=3.1e-27 Score=198.52 Aligned_cols=143 Identities=20% Similarity=0.266 Sum_probs=129.0
Q ss_pred chHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCChhHHHHHHHHHHHH
Q 037300 16 ENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNE--TKDKTMRNCLDVCFQVY 93 (159)
Q Consensus 16 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~--~~~~~~k~al~~C~~~y 93 (159)
.+..|+.+|..|.||++|+++|.+.|.+...++++|+++++++++.++.++...+..+... ..+++.+.||+||.|+|
T Consensus 63 ~~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~ELl 142 (565)
T PLN02468 63 ISTSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELL 142 (565)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHH
Confidence 3468999999999999999999999987778999999999999999999999888877643 45889999999999999
Q ss_pred HHHHHHHHHHHHHHh----cCChhhHHHHHHhhhhchhhccc-CC----CCcccchhHHHHHHHHHHHHHHhcc
Q 037300 94 DLAIYEIPTAIKYLE----SGDYDSAVQYANDGIIESDTCEK-IP----KSPLTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 94 ~~a~~~L~~a~~~l~----~~~~~~~~~~lsaa~~~~~tC~d-f~----~spl~~~~~~~~~l~~ial~i~~~l 158 (159)
++++++|++++..+. ...++|+++|||+|++|++||.| |. +++|.....++.+|++|+|+|++.+
T Consensus 143 ddaid~L~~Sl~~l~~~~~~~~~dDl~TWLSAAlTnq~TClDGF~e~~vk~~~~~~l~n~~eLtSNaLAIi~~l 216 (565)
T PLN02468 143 DLAIDNLNNSLTSSGGVSVLDNVDDLRTWLSSAGTYQETCIDGLAEPNLKSFGENHLKNSTELTSNSLAIITWI 216 (565)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHhcchhhhhhhhcccCchHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999887 33568999999999999999999 96 4568888999999999999999864
No 6
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=99.95 E-value=3.4e-27 Score=198.87 Aligned_cols=143 Identities=22% Similarity=0.385 Sum_probs=127.8
Q ss_pred chHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHH
Q 037300 16 ENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDL 95 (159)
Q Consensus 16 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~~ 95 (159)
.+..|+.+|..|.||++|+++|.+.|.+..+++++|+++++++++.++.++......+.....+++.+.||+||.|+|++
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~~~~~~r~k~AL~DClELldd 151 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSSTISYVQMPPRVRSAYDSCLELLDD 151 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Confidence 45689999999999999999999999877789999999999999999999877665554445788999999999999999
Q ss_pred HHHHHHHHHHHHhc----CChhhHHHHHHhhhhchhhccc-CC-------CCcccchhHHHHHHHHHHHHHHhcc
Q 037300 96 AIYEIPTAIKYLES----GDYDSAVQYANDGIIESDTCEK-IP-------KSPLTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 96 a~~~L~~a~~~l~~----~~~~~~~~~lsaa~~~~~tC~d-f~-------~spl~~~~~~~~~l~~ial~i~~~l 158 (159)
++++|++++..+.. ..++|+++|||+|++|++||+| |. +++|.....++.+|++|+|+|++.+
T Consensus 152 Aid~L~~Sl~~l~~~~~~~~~~DvkTWLSAALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNALAIi~~~ 226 (587)
T PLN02484 152 SVDALSRALSSVVPSSGGGSPQDVVTWLSAALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNCLAIFSAS 226 (587)
T ss_pred HHHHHHHHHHHHhccccccchHHHHhHHHHHhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999875 3578999999999999999999 95 2458888999999999999999874
No 7
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=99.94 E-value=4.9e-26 Score=192.07 Aligned_cols=143 Identities=21% Similarity=0.377 Sum_probs=127.3
Q ss_pred chHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCChhHHHHHHHHHHHH
Q 037300 16 ENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNE--TKDKTMRNCLDVCFQVY 93 (159)
Q Consensus 16 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~--~~~~~~k~al~~C~~~y 93 (159)
.+..|+.+|..|.||++|+++|.+.|.+...++++|+++++++++.++..+...++.+.+. ..+++.+.||+||.|+|
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClELl 137 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETI 137 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999998877667999999999999999999999999998753 46889999999999999
Q ss_pred HHHHHHHHHHHHHHhc--------CChhhHHHHHHhhhhchhhccc-CC--------CCcccchhHHHHHHHHHHHHHHh
Q 037300 94 DLAIYEIPTAIKYLES--------GDYDSAVQYANDGIIESDTCEK-IP--------KSPLTDRNNGLTNLCTIALDMIN 156 (159)
Q Consensus 94 ~~a~~~L~~a~~~l~~--------~~~~~~~~~lsaa~~~~~tC~d-f~--------~spl~~~~~~~~~l~~ial~i~~ 156 (159)
++++++|.+++..+.. ..++|+++|||+|++|++||.| |. +.+|.....++.+|++|+|+|++
T Consensus 138 ddavD~L~~Sl~~l~~~~~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAIv~ 217 (587)
T PLN02313 138 DETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIK 217 (587)
T ss_pred HHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998873 2358999999999999999999 95 12467777899999999999998
Q ss_pred cc
Q 037300 157 LF 158 (159)
Q Consensus 157 ~l 158 (159)
.+
T Consensus 218 ~~ 219 (587)
T PLN02313 218 NM 219 (587)
T ss_pred cc
Confidence 64
No 8
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=3.6e-25 Score=185.11 Aligned_cols=145 Identities=14% Similarity=0.245 Sum_probs=129.8
Q ss_pred CCchHHHHHHccCCCChhchHhhhhcCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHH
Q 037300 14 GEENDLIEATCRKTSYPDLCIKTLRSSPGS--SGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQ 91 (159)
Q Consensus 14 ~~~~~~i~~~C~~t~~~~~C~~~L~~~p~s--~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~ 91 (159)
.+..+.|+..|..|.||++|+++|.+.+.+ ...+|.+|++.+++.++.++..+...+..+.+...+++.+.||+||.|
T Consensus 47 ~~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~~~~~~~~~aAL~DC~E 126 (548)
T PLN02301 47 SSPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEIRIRINDPRDKAALADCVE 126 (548)
T ss_pred CCchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 355688999999999999999999987754 235899999999999999999999999998666678999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc---CChhhHHHHHHhhhhchhhccc-CC---CCcccchhHHHHHHHHHHHHHHhcc
Q 037300 92 VYDLAIYEIPTAIKYLES---GDYDSAVQYANDGIIESDTCEK-IP---KSPLTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 92 ~y~~a~~~L~~a~~~l~~---~~~~~~~~~lsaa~~~~~tC~d-f~---~spl~~~~~~~~~l~~ial~i~~~l 158 (159)
+|++++++|+++++.++. ++++|+++|||+|++|++||.| |. .++|.....++.+|++|+|+|++.+
T Consensus 127 Ll~davd~L~~Sl~~l~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~~~~~l~n~~qL~SNsLAiv~~l 200 (548)
T PLN02301 127 LMDLSKDRIKDSVEALGNVTSKSHADAHTWLSSVLTNHVTCLDGINGPSRQSMKPGLKDLISRARTSLAILVSV 200 (548)
T ss_pred HHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHhcchhhHHhhhhhhhhhhHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999988764 3578999999999999999999 96 4678888999999999999999864
No 9
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=4.4e-25 Score=185.22 Aligned_cols=144 Identities=16% Similarity=0.269 Sum_probs=124.8
Q ss_pred CchHHHHHHccCCCChhchHhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CChhHHHHHHHHHHH
Q 037300 15 EENDLIEATCRKTSYPDLCIKTLRSSPGS-SGADVKGLAHIILESASAYCNDTYEQVKKLLNET-KDKTMRNCLDVCFQV 92 (159)
Q Consensus 15 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~s-~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~-~~~~~k~al~~C~~~ 92 (159)
+....|+..|+.|.||++|+++|.+.|.. ...++.++++.++++++.++..+...+..|.+.. .+.....|++||.|+
T Consensus 42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~DC~EL 121 (553)
T PLN02708 42 STPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATNCLEV 121 (553)
T ss_pred CccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHH
Confidence 56688999999999999999999998853 4468999999999999999999999999987642 334445899999999
Q ss_pred HHHHHHHHHHHHHHHhcCChhhHHHHHHhhhhchhhccc-CC--C--Cccc---chhHHHHHHHHHHHHHHhcc
Q 037300 93 YDLAIYEIPTAIKYLESGDYDSAVQYANDGIIESDTCEK-IP--K--SPLT---DRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 93 y~~a~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d-f~--~--spl~---~~~~~~~~l~~ial~i~~~l 158 (159)
|++++++|++++..+....++|+++|||+||+|++||.| |. . +.+. ....++.+|++|+|+|++.+
T Consensus 122 lddavd~L~~Sl~~L~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~~~L~nvs~LtSNSLAmv~~~ 195 (553)
T PLN02708 122 LSNSEHRISSTDIALPRGKIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTMSFLDSLIGLTSNALSMMASY 195 (553)
T ss_pred HHHHHHHHHHHHHHhhhcchHHHHHHHHHHhccHhHHHHHhhccCccchHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 999999999999999888899999999999999999999 96 1 2333 45678999999999999863
No 10
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=1.1e-24 Score=182.27 Aligned_cols=141 Identities=16% Similarity=0.300 Sum_probs=121.9
Q ss_pred HHHHHHccCCCChhchHhhhhcCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHH
Q 037300 18 DLIEATCRKTSYPDLCIKTLRSSPGSSG-ADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDLA 96 (159)
Q Consensus 18 ~~i~~~C~~t~~~~~C~~~L~~~p~s~~-~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~~a 96 (159)
..|+..|..|.||++|+++|.+.|.+.. .++.++++++++.++.++.++...+..+.+...+++.+.||+||.|+|+++
T Consensus 35 ~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l~~~~~~~r~~~AL~DC~ELl~DA 114 (539)
T PLN02995 35 TDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELTNSGKNCTDFKKQAVLADCIDLYGDT 114 (539)
T ss_pred HHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999887644 489999999999999999999999998866557889999999999999999
Q ss_pred HHHHHHHHHHHhcC-------ChhhHHHHHHhhhhchhhccc-CCC-C---cccch--hHHHHHHHHHHHHHHhcc
Q 037300 97 IYEIPTAIKYLESG-------DYDSAVQYANDGIIESDTCEK-IPK-S---PLTDR--NNGLTNLCTIALDMINLF 158 (159)
Q Consensus 97 ~~~L~~a~~~l~~~-------~~~~~~~~lsaa~~~~~tC~d-f~~-s---pl~~~--~~~~~~l~~ial~i~~~l 158 (159)
+++|+++++.++.. .++|+++|||+|++|++||.| |.. . .+... +.++.+|++|+|+|++.+
T Consensus 115 vD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~v~~~v~~~~~~~ltSNaLAi~~~l 190 (539)
T PLN02995 115 IMQLNRTLQGVSPKAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDLNVSDFITPIVSNTKISHLISNCLAVNGAL 190 (539)
T ss_pred HHHHHHHHHHHhhccccccccchhhHHHHHHHHhcchhhhhhhhccccchhhhhhhhhhhhHHHHHHHHHHHhhhh
Confidence 99999999988632 357999999999999999999 961 1 12222 367999999999999875
No 11
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=99.92 E-value=8.2e-25 Score=185.71 Aligned_cols=140 Identities=19% Similarity=0.295 Sum_probs=123.7
Q ss_pred HHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHH
Q 037300 18 DLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDLAI 97 (159)
Q Consensus 18 ~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~~a~ 97 (159)
+.|+..|+.|.||++|+++|.+.+ ....++++|++.+++++++++.++...+..+.+...+++.+.|++||.|+|++++
T Consensus 54 ~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~~~~~~r~k~AL~DClELlddAv 132 (670)
T PLN02217 54 KAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQTMIELQKDPRTKMALDQCKELMDYAI 132 (670)
T ss_pred HHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999987 4457999999999999999999999999888654568899999999999999999
Q ss_pred HHHHHHHHHHhcC-------ChhhHHHHHHhhhhchhhccc-CC--CC----cccchhHHHHHHHHHHHHHHhcc
Q 037300 98 YEIPTAIKYLESG-------DYDSAVQYANDGIIESDTCEK-IP--KS----PLTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 98 ~~L~~a~~~l~~~-------~~~~~~~~lsaa~~~~~tC~d-f~--~s----pl~~~~~~~~~l~~ial~i~~~l 158 (159)
++|++++..+... ..+|+++|||+||+|++||.| |. .. -|.....++.+|++|+|+|++.+
T Consensus 133 DeL~~Sl~~L~~~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~~~vk~~m~~~l~nvseLtSNALAmv~~l 207 (670)
T PLN02217 133 GELSKSFEELGKFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVSEM 207 (670)
T ss_pred HHHHHHHHHHhhccccccccchhHHHHHHHHHHhchhHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999998731 257999999999999999999 96 22 25566789999999999999864
No 12
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.92 E-value=1.1e-24 Score=183.91 Aligned_cols=142 Identities=17% Similarity=0.292 Sum_probs=125.6
Q ss_pred CchHHHHHHccCCCChhchHhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHH
Q 037300 15 EENDLIEATCRKTSYPDLCIKTLRSSPG--SSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQV 92 (159)
Q Consensus 15 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~--s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~ 92 (159)
+..+.|+.+|..|.||++|+++|.+... +...+|.+|++++++.+++.+..+...+.++. ..+++.+.|++||.|+
T Consensus 77 ~~~~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~--~~~~r~k~Al~DC~EL 154 (596)
T PLN02745 77 QVDKIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFK--FENPDEKDAIEDCKLL 154 (596)
T ss_pred hHHHHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCHHHHHHHHHHHHH
Confidence 3447899999999999999999998643 23469999999999999999999988888774 3688999999999999
Q ss_pred HHHHHHHHHHHHHHHhc------CChhhHHHHHHhhhhchhhccc-CC----CCcccchhHHHHHHHHHHHHHHhcc
Q 037300 93 YDLAIYEIPTAIKYLES------GDYDSAVQYANDGIIESDTCEK-IP----KSPLTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 93 y~~a~~~L~~a~~~l~~------~~~~~~~~~lsaa~~~~~tC~d-f~----~spl~~~~~~~~~l~~ial~i~~~l 158 (159)
|++++++|++++..+.. ..++|+++|||+|++|++||.| |. +++|.....++.+|++|+|+|++.+
T Consensus 155 lddAid~L~~Sl~~l~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~l~s~m~~~l~~~~eLtSNALAiv~~l 231 (596)
T PLN02745 155 VEDAKEELKASISRINDEVNKLAKNVPDLNNWLSAVMSYQETCIDGFPEGKLKSEMEKTFKSSQELTSNSLAMVSSL 231 (596)
T ss_pred HHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHhccHhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999863 3478999999999999999999 96 4578888999999999999999864
No 13
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=99.92 E-value=1.3e-24 Score=182.80 Aligned_cols=141 Identities=18% Similarity=0.301 Sum_probs=122.1
Q ss_pred chHHHHHHccCCCChhchHhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCChhHHHHHHHHHHH
Q 037300 16 ENDLIEATCRKTSYPDLCIKTLRS-SPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNE--TKDKTMRNCLDVCFQV 92 (159)
Q Consensus 16 ~~~~i~~~C~~t~~~~~C~~~L~~-~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~--~~~~~~k~al~~C~~~ 92 (159)
.+..|+..|..|.||++|+++|.+ .|. ..+|++|++.++++++..+.++...+..++.. ..+++.+.|++||.|+
T Consensus 52 ~~~~Ik~~C~~T~YP~lC~ssLs~a~~~--~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~EL 129 (572)
T PLN02990 52 TTKAVEAVCAPTDYKETCVNSLMKASPD--STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKL 129 (572)
T ss_pred hhHHHHHhhcCCCCcHHHHHHhhhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHH
Confidence 346899999999999999999987 443 46899999999999999999999988877643 5789999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC-------ChhhHHHHHHhhhhchhhccc-CC--CCc----ccchhHHHHHHHHHHHHHHhcc
Q 037300 93 YDLAIYEIPTAIKYLESG-------DYDSAVQYANDGIIESDTCEK-IP--KSP----LTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 93 y~~a~~~L~~a~~~l~~~-------~~~~~~~~lsaa~~~~~tC~d-f~--~sp----l~~~~~~~~~l~~ial~i~~~l 158 (159)
|++++++|++++..+... .++|+++|||+||+|++||.| |. .++ +.....++.+|++|+|+|++.+
T Consensus 130 lddAvdeL~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~s~lk~~~~~~l~nv~~LtSNALAiv~~~ 209 (572)
T PLN02990 130 MNDATDDLKKCLDNFDGFSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIKSNLSQDMLKIFKTSRELTSNGLAMITNI 209 (572)
T ss_pred HHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHhccHhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999998732 268999999999999999999 96 444 4445567889999999999864
No 14
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.92 E-value=1.6e-24 Score=181.02 Aligned_cols=144 Identities=13% Similarity=0.205 Sum_probs=125.5
Q ss_pred CchHHHHHHccCCCChhchHhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHH
Q 037300 15 EENDLIEATCRKTSYPDLCIKTLRSSPG-SSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVY 93 (159)
Q Consensus 15 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~-s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y 93 (159)
+....|...|..|.||++|+++|.+... +...||++|++.++++++.++..+...+..+.+...+++.+.+++||.|+|
T Consensus 32 ~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~~~~~r~~~Al~DC~Ell 111 (537)
T PLN02506 32 NFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKFNALSISYREQVAIEDCKELL 111 (537)
T ss_pred hHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 5567899999999999999999997543 344799999999999999999999999999876567889999999999999
Q ss_pred HHHHHHHHHHHHHHhc----CC----hhhHHHHHHhhhhchhhccc-CC--CC----cccchhHHHHHHHHHHHHHHhcc
Q 037300 94 DLAIYEIPTAIKYLES----GD----YDSAVQYANDGIIESDTCEK-IP--KS----PLTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 94 ~~a~~~L~~a~~~l~~----~~----~~~~~~~lsaa~~~~~tC~d-f~--~s----pl~~~~~~~~~l~~ial~i~~~l 158 (159)
++++++|+.++..++. .. .+|+++|||+|+++++||.| |. .+ .+.....++.+|++|+|+|++.+
T Consensus 112 ddSvd~L~~Sl~el~~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~k~~v~~~l~nv~~LtSNALAiv~~l 191 (537)
T PLN02506 112 DFSVSELAWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTDRHLENFIKGSLKQVTQLISNVLAMYTQL 191 (537)
T ss_pred HHHHHHHHHHHHHHhhcccccccccchhhHHhHHHHHhccHhHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999988853 12 37999999999999999999 96 22 36666789999999999999864
No 15
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.92 E-value=4.5e-24 Score=178.58 Aligned_cols=144 Identities=15% Similarity=0.281 Sum_probs=123.2
Q ss_pred CchHHHHHHccCCCChhchHhhhhcCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChhHHHHHHHHHHH
Q 037300 15 EENDLIEATCRKTSYPDLCIKTLRSSPGSS-GADVKGLAHIILESASAYCNDTYEQVKKLLNE-TKDKTMRNCLDVCFQV 92 (159)
Q Consensus 15 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~s~-~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~-~~~~~~k~al~~C~~~ 92 (159)
+..+.|+.+|+.|+||++|+++|.+.|... ..++.+++.++++.++..+..+...+..+... ..+++.+.||+||.|+
T Consensus 36 ~~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~A~~~~~~~s~l~s~~~~~~~~~~~~k~AL~DC~El 115 (541)
T PLN02416 36 PHLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQTAISEAGKLTNLLSGAGQSSNIIEKQRGTIQDCKEL 115 (541)
T ss_pred hHHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHH
Confidence 345689999999999999999999887543 35788999999999999988888777766433 3478899999999999
Q ss_pred HHHHHHHHHHHHHHHhcC---ChhhHHHHHHhhhhchhhccc-CC------CCcccchhHHHHHHHHHHHHHHhcc
Q 037300 93 YDLAIYEIPTAIKYLESG---DYDSAVQYANDGIIESDTCEK-IP------KSPLTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 93 y~~a~~~L~~a~~~l~~~---~~~~~~~~lsaa~~~~~tC~d-f~------~spl~~~~~~~~~l~~ial~i~~~l 158 (159)
|++++++|++++..|..+ .++|+++|||+|++|++||.| |. ++++.....++.++++|+|+|++.+
T Consensus 116 ~~dAvD~L~~Sl~~L~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~~~i~~~~~~v~qltSNALAlv~~~ 191 (541)
T PLN02416 116 HQITVSSLKRSVSRIQAGDSRKLADARAYLSAALTNKNTCLEGLDSASGPLKPKLVNSFTSTYKHVSNSLSMLPKS 191 (541)
T ss_pred HHHHHHHHHHHHHHHhhccccchhhHHHHHHHHhcchhhHHhhhhhcCcchhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999998753 467899999999999999999 96 2357888889999999999999754
No 16
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.92 E-value=4.9e-24 Score=177.01 Aligned_cols=141 Identities=15% Similarity=0.288 Sum_probs=124.8
Q ss_pred CCchHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--CChhHHHHHHHHH
Q 037300 14 GEENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNE-T--KDKTMRNCLDVCF 90 (159)
Q Consensus 14 ~~~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~-~--~~~~~k~al~~C~ 90 (159)
.+....|+..|..|.||++|+++|.+.+. ++++|++.++++++.++..+...+.++.+. . .+++.+.+++||.
T Consensus 19 ~~~~~~I~~~C~~T~YP~~C~ssLs~~~~----~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~~Al~DC~ 94 (497)
T PLN02698 19 FAYQNEVQRECSFTKYPSLCVQTLRGLRH----DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTPSVSDSCE 94 (497)
T ss_pred hhHHHHHHHhccCCCChHHHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHHHHHHHHH
Confidence 45668899999999999999999999774 899999999999999999999999987654 2 2478889999999
Q ss_pred HHHHHHHHHHHHHHHHHhc---CChhhHHHHHHhhhhchhhccc-CC----------CCcccchhHHHHHHHHHHHHHHh
Q 037300 91 QVYDLAIYEIPTAIKYLES---GDYDSAVQYANDGIIESDTCEK-IP----------KSPLTDRNNGLTNLCTIALDMIN 156 (159)
Q Consensus 91 ~~y~~a~~~L~~a~~~l~~---~~~~~~~~~lsaa~~~~~tC~d-f~----------~spl~~~~~~~~~l~~ial~i~~ 156 (159)
|+|++++++|++++..+.. ..++|+++|||+|++|++||.| |. ++++.....++.+|++|+|+|++
T Consensus 95 Ell~dsvd~L~~Sl~~l~~~~~~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSNALAmv~ 174 (497)
T PLN02698 95 RLMKMSLKRLRQSLLALKGSSRKNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSNSLALVN 174 (497)
T ss_pred HHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998875 4578999999999999999999 93 22477788999999999999998
Q ss_pred cc
Q 037300 157 LF 158 (159)
Q Consensus 157 ~l 158 (159)
.+
T Consensus 175 ~l 176 (497)
T PLN02698 175 RI 176 (497)
T ss_pred hh
Confidence 65
No 17
>PLN02197 pectinesterase
Probab=99.91 E-value=1.2e-23 Score=177.08 Aligned_cols=138 Identities=16% Similarity=0.245 Sum_probs=121.2
Q ss_pred HHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCChhHHHHHHHHHHHHH
Q 037300 18 DLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLL---NETKDKTMRNCLDVCFQVYD 94 (159)
Q Consensus 18 ~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~---~~~~~~~~k~al~~C~~~y~ 94 (159)
+.|+.+|..|.||++|.++|.+.| ..++++|++.++++++.++.++...+..+. ....+++.+.|++||.|+|+
T Consensus 39 k~I~s~C~~T~YP~lC~ssLs~~~---s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~eLl~ 115 (588)
T PLN02197 39 KAVQGICQSTSDKASCVKTLEPVK---SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCKRVFM 115 (588)
T ss_pred HHHHHhcCCCCChHHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHHH
Confidence 489999999999999999999987 358999999999999999999999888664 22458899999999999999
Q ss_pred HHHHHHHHHHHHHhc------CChhhHHHHHHhhhhchhhccc-CCC----CcccchhHHHHHHHHHHHHHHhcc
Q 037300 95 LAIYEIPTAIKYLES------GDYDSAVQYANDGIIESDTCEK-IPK----SPLTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 95 ~a~~~L~~a~~~l~~------~~~~~~~~~lsaa~~~~~tC~d-f~~----spl~~~~~~~~~l~~ial~i~~~l 158 (159)
+++++|+.++..+.. ...+|+++|||+|++|++||.| |.. ..+.....++.+|++|+|+|++.+
T Consensus 116 davd~L~~Sl~~l~~~~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~~~k~~v~~~l~nv~~LtSNaLAiv~~l 190 (588)
T PLN02197 116 YALEDLSTIVEEMGEDLNQIGSKIDQLKQWLTGVYNYQTDCLDDIEEDDLRKTIGEGIANSKILTSNAIDIFHSV 190 (588)
T ss_pred HHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHhChhhhhccccCcchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999872 2368999999999999999999 962 236666788999999999999764
No 18
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=6.6e-24 Score=178.42 Aligned_cols=139 Identities=15% Similarity=0.210 Sum_probs=120.3
Q ss_pred chHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CChhHHHHHHHHHHH
Q 037300 16 ENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNET---KDKTMRNCLDVCFQV 92 (159)
Q Consensus 16 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~---~~~~~k~al~~C~~~ 92 (159)
..-.+...|..|.||++|+++|.+. ...|++++++++++.++.++..+...+..+.+.. .+++.+.||+||.|+
T Consensus 31 ~~~~~~s~C~~T~YP~~C~ssLs~s---~~~d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~~~~~~~r~k~AL~DC~EL 107 (566)
T PLN02713 31 TPVSPSTICNTTPDPSFCKSVLPHN---QPGNVYDYGRFSVRKSLSQSRKFLSLVDRYLKRNSTLLSKSAIRALEDCQFL 107 (566)
T ss_pred CCCCCccccCCCCChHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHH
Confidence 3345788999999999999999752 2468999999999999999999999999987642 388999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC-------ChhhHHHHHHhhhhchhhccc-CC-C---Cc----ccchhHHHHHHHHHHHHHHh
Q 037300 93 YDLAIYEIPTAIKYLESG-------DYDSAVQYANDGIIESDTCEK-IP-K---SP----LTDRNNGLTNLCTIALDMIN 156 (159)
Q Consensus 93 y~~a~~~L~~a~~~l~~~-------~~~~~~~~lsaa~~~~~tC~d-f~-~---sp----l~~~~~~~~~l~~ial~i~~ 156 (159)
|++++++|++++..+... .++|+++|||+|++|++||.| |. . .. |.....++.+|++|+|+|++
T Consensus 108 lddavD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSNaLAlv~ 187 (566)
T PLN02713 108 AGLNIDFLLSSFETVNSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSVSLALFT 187 (566)
T ss_pred HHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999998732 478999999999999999999 96 1 11 55667789999999999997
Q ss_pred c
Q 037300 157 L 157 (159)
Q Consensus 157 ~ 157 (159)
.
T Consensus 188 ~ 188 (566)
T PLN02713 188 K 188 (566)
T ss_pred c
Confidence 5
No 19
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.90 E-value=5.3e-23 Score=172.25 Aligned_cols=136 Identities=18% Similarity=0.292 Sum_probs=118.7
Q ss_pred HHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCChhHHHHHHHHHHHHHH
Q 037300 21 EATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNE-----TKDKTMRNCLDVCFQVYDL 95 (159)
Q Consensus 21 ~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~-----~~~~~~k~al~~C~~~y~~ 95 (159)
..+|+.|.||++|+++|.+.+.+. .++.++++.++++++.++..+...+.++... ..+++.+.||+||.|++++
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~~-~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELldd 81 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSSP-SDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSEL 81 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHHH
Confidence 468999999999999999877543 5999999999999999999999999988632 3678899999999999999
Q ss_pred HHHHHHHHHHHHhcCC------hhhHHHHHHhhhhchhhccc-CC--CC----cccchhHHHHHHHHHHHHHHhc
Q 037300 96 AIYEIPTAIKYLESGD------YDSAVQYANDGIIESDTCEK-IP--KS----PLTDRNNGLTNLCTIALDMINL 157 (159)
Q Consensus 96 a~~~L~~a~~~l~~~~------~~~~~~~lsaa~~~~~tC~d-f~--~s----pl~~~~~~~~~l~~ial~i~~~ 157 (159)
++++|.+++..+.... .+|+++|||+|++|++||.| |. .+ .+.....++.+|++|+|+|++.
T Consensus 82 SvD~L~~Sl~~L~~~~~~~~~~~~DvqTWLSAALTnqdTClDGF~~~~~~~k~~i~~~l~nvt~LtSNaLAlv~~ 156 (538)
T PLN03043 82 NVDYLETISSELKSAELMTDALVERVTSLLSGVVTNQQTCYDGLVDSKSSFAAALGAPLGNLTRLYSVSLGLVSH 156 (538)
T ss_pred HHHHHHHHHHHHhccccccccchhhHHHhHHHhhcChhhhhchhhccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999987532 57999999999999999999 96 22 2666678999999999999984
No 20
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.75 E-value=1.6e-17 Score=137.26 Aligned_cols=136 Identities=13% Similarity=0.107 Sum_probs=117.6
Q ss_pred HHccCCCChhchHhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ChhHHHHHHHH----HHH
Q 037300 22 ATCRKTSYPDLCIKTLRSSP----GSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETK-DKTMRNCLDVC----FQV 92 (159)
Q Consensus 22 ~~C~~t~~~~~C~~~L~~~p----~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~-~~~~k~al~~C----~~~ 92 (159)
.+|..+++|+.|...|.... .....++..++..+++.++.++..+...+..+.+... +++++.+++|| .|+
T Consensus 3 ~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~dc~~~c~el 82 (509)
T PLN02488 3 GVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKLLEEMENDMLGVKEDTNLFEEM 82 (509)
T ss_pred eecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhHHHhHHHHHHH
Confidence 47999999999999987765 2233468999999999999999999999999988755 89999999999 999
Q ss_pred HHHHHHHHHHHHHHHhc------CChhhHHHHHHhhhhchhhccc-CCCC----cccchhHHHHHHHHHHHHHHhc
Q 037300 93 YDLAIYEIPTAIKYLES------GDYDSAVQYANDGIIESDTCEK-IPKS----PLTDRNNGLTNLCTIALDMINL 157 (159)
Q Consensus 93 y~~a~~~L~~a~~~l~~------~~~~~~~~~lsaa~~~~~tC~d-f~~s----pl~~~~~~~~~l~~ial~i~~~ 157 (159)
|++++++|.+++..+.. ...+|+++|||+|++|++||.| |..+ .|.....++.+|++|+|+|+..
T Consensus 83 ~~~~~~~l~~s~~~~~~~~~~~~~~~~d~~twLSa~lt~q~TC~dg~~~~~~~~~~~~~l~~~~~~~sn~La~~~~ 158 (509)
T PLN02488 83 MESAKDRMIRSVEELLGGESPNLGSYENVHTWLSGVLTSYITCIDEIGEGAYKRRVEPELEDLISRARVALAIFIS 158 (509)
T ss_pred HHHHHHHHHHHHHHhhcccccccCcHHHHHHHHHHhHhchhhHhccccCcchHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999852 2368999999999999999999 9632 3556677899999999999875
No 21
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.75 E-value=2.2e-17 Score=137.68 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=99.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CChhhHHHHH
Q 037300 45 GADVKGLAHIILESASAYCNDTYEQVKKLLNE---TKDKTMRNCLDVCFQVYDLAIYEIPTAIKYLES--GDYDSAVQYA 119 (159)
Q Consensus 45 ~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~---~~~~~~k~al~~C~~~y~~a~~~L~~a~~~l~~--~~~~~~~~~l 119 (159)
+.|+++|++.++++++.++..+...+..|.+. ..+++++.|++||.|+|++++++|++++..+.. ..++|+++||
T Consensus 48 ~~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~~~~~~~Dv~TWL 127 (530)
T PLN02933 48 TKTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRSSSPEFNDVSMLL 127 (530)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHH
Confidence 46899999999999999999999999988653 368899999999999999999999999999876 4689999999
Q ss_pred Hhhhhchhhccc-CC--C------C--c----ccchhHHHHHHHHHHHHHHhcc
Q 037300 120 NDGIIESDTCEK-IP--K------S--P----LTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 120 saa~~~~~tC~d-f~--~------s--p----l~~~~~~~~~l~~ial~i~~~l 158 (159)
|+|+++++||.| |. . . + +.....++.+|++|+|+|++.+
T Consensus 128 SAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~l 181 (530)
T PLN02933 128 SNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNI 181 (530)
T ss_pred HHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999 96 2 1 2 3445578999999999999854
No 22
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.69 E-value=2.2e-16 Score=131.75 Aligned_cols=111 Identities=13% Similarity=0.131 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------ChhhHHH
Q 037300 47 DVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDLAIYEIPTAIKYLESG---------DYDSAVQ 117 (159)
Q Consensus 47 d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~~a~~~L~~a~~~l~~~---------~~~~~~~ 117 (159)
.+..+++.+++.++.++.++...+.++.+...+++.+.|++||.|++++++++|++++..++.. ..+|+++
T Consensus 36 ~~~~~~~~~L~~tl~~a~~a~~~vs~l~~~~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~~~~~~~~~~DvqT 115 (520)
T PLN02201 36 VPPSEFVSSLKTTVDVIRKVVSIVSQFDKVFGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGSDLRT 115 (520)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHH
Confidence 4577889999999999999999999887655688999999999999999999999999988632 2589999
Q ss_pred HHHhhhhchhhccc-CC--CC----cccchhHHHHHHHHHHHHHHhc
Q 037300 118 YANDGIIESDTCEK-IP--KS----PLTDRNNGLTNLCTIALDMINL 157 (159)
Q Consensus 118 ~lsaa~~~~~tC~d-f~--~s----pl~~~~~~~~~l~~ial~i~~~ 157 (159)
|||+|++|++||.| |. .+ .+.....++.+|++|+|+|++.
T Consensus 116 WLSAALTnq~TClDGF~~~~~~~k~~v~~~l~nvt~LtSNaLALv~~ 162 (520)
T PLN02201 116 WLSAALSNQDTCIEGFDGTNGIVKKLVAGSLSQVGSTVRELLTMVHP 162 (520)
T ss_pred HHHhhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999 96 22 2556677899999999999974
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.51 E-value=5.3e-14 Score=117.35 Aligned_cols=117 Identities=16% Similarity=0.161 Sum_probs=87.5
Q ss_pred CChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037300 28 SYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDLAIYEIPTAIKYL 107 (159)
Q Consensus 28 ~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~~a~~~L~~a~~~l 107 (159)
+||..|..+|++-..+ -+..+...+++..+... ...+ . .....|++||.|++++++++|+++++..
T Consensus 58 ~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~---~~~~-------~-~~~~~Al~DC~ELlddavd~L~~S~~~~ 123 (529)
T PLN02170 58 PSSSSKQGFLSSVQES---MNHALFARSLAFNLTLS---HRTV-------Q-THTFDPVNDCLELLDDTLDMLSRIVVIK 123 (529)
T ss_pred CCcchhhhhhhhhhcc---ChHHHHHhhhHhhhhhh---hhhc-------c-cchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8999999999865332 36667777777655511 1111 1 2226789999999999999999999665
Q ss_pred hc-CChhhHHHHHHhhhhchhhccc-CC--CC--c----ccchhHHHHHHHHHHHHHHhcc
Q 037300 108 ES-GDYDSAVQYANDGIIESDTCEK-IP--KS--P----LTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 108 ~~-~~~~~~~~~lsaa~~~~~tC~d-f~--~s--p----l~~~~~~~~~l~~ial~i~~~l 158 (159)
.. ...+|+++|||+|++|++||.| |. .+ . +.....++.+|++|+|+|++.+
T Consensus 124 ~~~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~ 184 (529)
T PLN02170 124 HADHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSV 184 (529)
T ss_pred ccccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 43 3478999999999999999999 96 21 1 3344568999999999999764
No 24
>PLN02916 pectinesterase family protein
Probab=99.39 E-value=9.5e-13 Score=109.43 Aligned_cols=79 Identities=14% Similarity=0.164 Sum_probs=67.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHhhhhchhhccc-CC--CCcccchhHHHHHHHHHHHHHHh
Q 037300 80 KTMRNCLDVCFQVYDLAIYEIPTAIKYLESGDYDSAVQYANDGIIESDTCEK-IP--KSPLTDRNNGLTNLCTIALDMIN 156 (159)
Q Consensus 80 ~~~k~al~~C~~~y~~a~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d-f~--~spl~~~~~~~~~l~~ial~i~~ 156 (159)
-..-.|++||.|+|++++++|..++..+.....+|+++|||+|++|++||.| |. .........++.+|++|+|+|++
T Consensus 59 ~~~~~Al~DC~ELl~dSvd~L~~Sl~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~v~nvt~ltSNaLAlv~ 138 (502)
T PLN02916 59 YNLGEALSDCEKLYDESEARLSKLLVSHENFTVEDARTWLSGVLANHHTCLDGLEQKGQGHKPMAHNVTFVLSEALALYK 138 (502)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHhCHhHHHHhhhhccccchHHHHHHHHHHHHHHHHhh
Confidence 3467899999999999999999999988777789999999999999999999 96 22223445689999999999997
Q ss_pred cc
Q 037300 157 LF 158 (159)
Q Consensus 157 ~l 158 (159)
.+
T Consensus 139 ~~ 140 (502)
T PLN02916 139 KS 140 (502)
T ss_pred hh
Confidence 64
No 25
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=81.16 E-value=8.2 Score=22.17 Aligned_cols=45 Identities=11% Similarity=0.161 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHH
Q 037300 57 ESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDLAIYEIP 101 (159)
Q Consensus 57 ~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~~a~~~L~ 101 (159)
+.++.....+.+....+.-.+.|+..|..|..|.+..+..+..|+
T Consensus 3 kq~lAslK~~qA~Le~fal~T~d~~AK~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 3 KQTLASLKKAQADLETFALQTQDQEAKQMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred HHHHHHHHHHHhhHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 445555666666666665556789999999999999999888875
No 26
>TIGR00208 fliS flagellar biosynthetic protein FliS. The function of this protein in flagellar biosynthesis is unknown, but appears to be regulatory. The member of this family in Vibrio parahaemolyticus is designated FlaJ (creating a synonym for FliS) and was shown essential for flagellin biosynthesis.
Probab=70.61 E-value=11 Score=25.93 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhHHHHHHhhh
Q 037300 90 FQVYDLAIYEIPTAIKYLESGDYDSAVQYANDGI 123 (159)
Q Consensus 90 ~~~y~~a~~~L~~a~~~l~~~~~~~~~~~lsaa~ 123 (159)
.-+|+.++..|..|..++..+++...+..++.|.
T Consensus 25 ~mLydg~i~~l~~a~~ai~~~d~~~~~~~i~ka~ 58 (124)
T TIGR00208 25 LMLYNGCLKFIRLAAQAIENDDIERKNENLIKAQ 58 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3456666666666666666666666655555543
No 27
>PRK05685 fliS flagellar protein FliS; Validated
Probab=66.82 E-value=37 Score=23.47 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhHHHHHHhh
Q 037300 90 FQVYDLAIYEIPTAIKYLESGDYDSAVQYANDG 122 (159)
Q Consensus 90 ~~~y~~a~~~L~~a~~~l~~~~~~~~~~~lsaa 122 (159)
.-+|+.++..++.|..++..+++...+..+..|
T Consensus 29 ~mLydgai~~l~~A~~ai~~~~~~~~~~~l~ka 61 (132)
T PRK05685 29 QMLYEGALSFLAQAKLAIEQGDIEAKGEYLSKA 61 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345666666666666666666655555554444
No 28
>PF02561 FliS: Flagellar protein FliS; InterPro: IPR003713 The fliD operon of several bacteria consists of three flagellar genes, fliD, fliS, and fliT, and is transcribed in this order []. In Bacillus subtilis the operon encoding the flagellar proteins FliD, FliS, and FliT is sigma D-dependent [].; GO: 0009296 flagellum assembly, 0009288 bacterial-type flagellum; PDB: 1VH6_A 3IQC_B 3K1I_B 1ORJ_B 1ORY_A.
Probab=63.78 E-value=14 Score=25.10 Aligned_cols=23 Identities=17% Similarity=0.268 Sum_probs=11.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q 037300 46 ADVKGLAHIILESASAYCNDTYE 68 (159)
Q Consensus 46 ~d~~~la~~ai~~a~~~~~~a~~ 68 (159)
++|.+|+.+-.+-++.....+..
T Consensus 16 asp~~Li~~Lyd~ai~~l~~a~~ 38 (122)
T PF02561_consen 16 ASPHQLILMLYDGAIEFLKQAKE 38 (122)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555554444443
No 29
>KOG4841 consensus Dolichol-phosphate mannosyltransferase, subunit 3 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=63.23 E-value=6.5 Score=25.35 Aligned_cols=26 Identities=15% Similarity=0.025 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037300 85 CLDVCFQVYDLAIYEIPTAIKYLESG 110 (159)
Q Consensus 85 al~~C~~~y~~a~~~L~~a~~~l~~~ 110 (159)
-++||.|.|-+-+.++++|.++++.+
T Consensus 66 TfnDc~eA~veL~~~IkEAr~~L~rk 91 (95)
T KOG4841|consen 66 TFNDCEEAAVELQSQIKEARADLARK 91 (95)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHc
Confidence 37899999999999999999999865
No 30
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=58.08 E-value=7.5 Score=25.38 Aligned_cols=27 Identities=19% Similarity=0.102 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037300 85 CLDVCFQVYDLAIYEIPTAIKYLESGD 111 (159)
Q Consensus 85 al~~C~~~y~~a~~~L~~a~~~l~~~~ 111 (159)
.++||.|.|.+-..++++|.++++++.
T Consensus 62 tFnDcpeA~~eL~~eI~eAK~dLr~kG 88 (91)
T PF08285_consen 62 TFNDCPEAAKELQKEIKEAKADLRKKG 88 (91)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 378999999999999999999998753
No 31
>COG1516 FliS Flagellin-specific chaperone FliS [Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones]
Probab=56.79 E-value=27 Score=24.44 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhHHHHHHhhh
Q 037300 90 FQVYDLAIYEIPTAIKYLESGDYDSAVQYANDGI 123 (159)
Q Consensus 90 ~~~y~~a~~~L~~a~~~l~~~~~~~~~~~lsaa~ 123 (159)
.-+|+.++..|..|..++..+++......+..|.
T Consensus 25 ~MLyeg~l~~l~~A~~aie~~~i~~k~~~i~ka~ 58 (132)
T COG1516 25 LMLYEGALKFLKRAKEAIEQEDIEEKNESIDKAI 58 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4577777777887887787777776666666554
No 32
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=55.54 E-value=22 Score=21.22 Aligned_cols=29 Identities=14% Similarity=0.285 Sum_probs=22.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 037300 77 TKDKTMRNCLDVCFQVYDLAIYEIPTAIK 105 (159)
Q Consensus 77 ~~~~~~k~al~~C~~~y~~a~~~L~~a~~ 105 (159)
..++.++.+++.|.+-|-++...+.....
T Consensus 36 ~L~~~E~~Ci~~C~~ky~~~~~~v~~~~~ 64 (66)
T PF02953_consen 36 SLSSKEESCIDNCVDKYIDTNQFVSKRFQ 64 (66)
T ss_dssp S--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34788999999999999998888776653
No 33
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=47.20 E-value=79 Score=20.65 Aligned_cols=51 Identities=14% Similarity=0.272 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHH--HH---hc---CCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 037300 54 IILESASAYCNDTYEQVKK--LL---NE---TKDKTMRNCLDVCFQVYDLAIYEIPTAI 104 (159)
Q Consensus 54 ~ai~~a~~~~~~a~~~i~~--l~---~~---~~~~~~k~al~~C~~~y~~a~~~L~~a~ 104 (159)
+..++|..+|.+.+..+.. +- .. +.++.++.+++.|.+-|-++-.-+.++.
T Consensus 26 VkqqlAvAnAqeLv~kisekCf~KCit~PGssl~~~e~~Cis~CmdRyMdawniVSrty 84 (97)
T KOG1733|consen 26 VKQQLAVANAQELVSKISEKCFDKCITKPGSSLDSSEKSCISRCMDRYMDAWNIVSRTY 84 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666666655542 11 11 2477899999999999999877666554
No 34
>KOG3470 consensus Beta-tubulin folding cofactor A [Posttranslational modification, protein turnover, chaperones]
Probab=44.45 E-value=96 Score=20.81 Aligned_cols=62 Identities=21% Similarity=0.141 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 037300 47 DVKGLAHIILESASAYCNDTYEQVKKLLNETKDK----TMRNCLDVCFQVYDLAIYEIPTAIKYLES 109 (159)
Q Consensus 47 d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~----~~k~al~~C~~~y~~a~~~L~~a~~~l~~ 109 (159)
..+.|.+- +....+.+...-..+.++..++.+| ..+..|+.|....-++..+|+++...|..
T Consensus 14 vvkRlvKE-~~~Yekev~~eeakvakl~~dg~d~ydlkkQeeVl~et~~mlPD~~~RL~~a~~DLe~ 79 (107)
T KOG3470|consen 14 VVKRLVKE-VEYYEKEVKEEEAKVAKLKDDGADPYDLKKQEEVLKETRMMLPDSQRRLRKAYEDLES 79 (107)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHH
Confidence 45555554 4455666677777788887776666 45678999999999999999999887764
No 35
>TIGR03504 FimV_Cterm FimV C-terminal domain. This protein is found at the extreme C-terminus of FimV from Pseudomonas aeruginosa, and of TspA of Neisseria meningitidis. Disruption of the former blocks twitching motility from type IV pili; Semmler, et al. suggest a role in peptidoglycan layer remodelling required by type IV fimbrial systems.
Probab=38.93 E-value=56 Score=18.10 Aligned_cols=26 Identities=27% Similarity=0.403 Sum_probs=21.1
Q ss_pred HHHHHHHHHhcCChhhHHHHHHhhhh
Q 037300 99 EIPTAIKYLESGDYDSAVQYANDGII 124 (159)
Q Consensus 99 ~L~~a~~~l~~~~~~~~~~~lsaa~~ 124 (159)
.|+-|...+..||++.++.+|..++.
T Consensus 2 kLdLA~ayie~Gd~e~Ar~lL~evl~ 27 (44)
T TIGR03504 2 KLDLARAYIEMGDLEGARELLEEVIE 27 (44)
T ss_pred chHHHHHHHHcCChHHHHHHHHHHHH
Confidence 35667778888999999999988774
No 36
>KOG4514 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.83 E-value=1.6e+02 Score=21.88 Aligned_cols=59 Identities=15% Similarity=0.135 Sum_probs=35.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 037300 45 GADVKGLAHIILESASAYCNDTYEQVKKLLNE--TKDKTMRNCLDVCFQVYDLAIYEIPTAIKYLE 108 (159)
Q Consensus 45 ~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~--~~~~~~k~al~~C~~~y~~a~~~L~~a~~~l~ 108 (159)
..||.-|.-+ ...+..-.+.+..|+++ +.-...-.---+|.+.|..+++.|.+++++--
T Consensus 121 ~vDp~VL~Dl-----E~~~~el~~~vD~llr~lgg~lh~is~lt~~~vq~yr~aV~kl~d~~DanI 181 (222)
T KOG4514|consen 121 EVDPSVLSDL-----ELEAQELASSVDNLLRNLGGLLHSISSLTADNVQVYRNAVNKLTDTLDANI 181 (222)
T ss_pred CCChHHHHHH-----HHHHHHHHHHHHHHHHHhhhHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Confidence 3465544332 33444455556666654 11122333456899999999999999887633
No 37
>PF14346 DUF4398: Domain of unknown function (DUF4398)
Probab=35.06 E-value=1.1e+02 Score=19.91 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhHHHHHHhhhhc
Q 037300 92 VYDLAIYEIPTAIKYLESGDYDSAVQYANDGIIE 125 (159)
Q Consensus 92 ~y~~a~~~L~~a~~~l~~~~~~~~~~~lsaa~~~ 125 (159)
.|..+-+.|..+...+..++|..+.....-|..+
T Consensus 41 el~~A~~~L~~A~~a~~~~~y~~A~~~A~~A~~~ 74 (103)
T PF14346_consen 41 ELKEAREKLQRAKAALDDGDYERARRLAEQAQAD 74 (103)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7888999999999999999999888877666543
No 38
>PRK09591 celC cellobiose phosphotransferase system IIA component; Reviewed
Probab=32.44 E-value=1e+02 Score=20.55 Aligned_cols=27 Identities=30% Similarity=0.363 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHhcCChhhHHHHHHhh
Q 037300 96 AIYEIPTAIKYLESGDYDSAVQYANDG 122 (159)
Q Consensus 96 a~~~L~~a~~~l~~~~~~~~~~~lsaa 122 (159)
|....-+|++..+.|+|+.++..+..|
T Consensus 20 Ars~~~eAl~~ak~gdf~~A~~~l~eA 46 (104)
T PRK09591 20 ARTEVHEAFAAMREGNFDLAEQKLNQS 46 (104)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 444444444445555554444444433
No 39
>cd00215 PTS_IIA_lac PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. This family of proteins normally function as a homotrimer, stabilized by a centrally located metal ion. Separation into subunits is thought to occur after phosphorylation.
Probab=32.42 E-value=1e+02 Score=20.22 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHhcCChhhHHHHHHhh
Q 037300 96 AIYEIPTAIKYLESGDYDSAVQYANDG 122 (159)
Q Consensus 96 a~~~L~~a~~~l~~~~~~~~~~~lsaa 122 (159)
|....-+|++..+.|+|+.++..+..|
T Consensus 15 Ars~~~eAl~~a~~g~fe~A~~~l~ea 41 (97)
T cd00215 15 ARSKALEALKAAKEGDFAEAEELLEEA 41 (97)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 344444444444555554444444333
No 40
>PF02203 TarH: Tar ligand binding domain homologue; InterPro: IPR003122 Methyl-accepting chemotaxis proteins (MCPs) are a family of bacterial receptors that mediate chemotaxis to diverse signals, responding to changes in the concentration of attractants and repellents in the environment by altering swimming behaviour []. Environmental diversity gives rise to diversity in bacterial signalling receptors, and consequently there are many genes encoding MCPs []. For example, there are four well-characterised MCPs found in Escherichia coli: Tar (taxis towards aspartate and maltose, away from nickel and cobalt), Tsr (taxis towards serine, away from leucine, indole and weak acids), Trg (taxis towards galactose and ribose) and Tap (taxis towards dipeptides). MCPs share similar topology and signalling mechanisms. MCPs either bind ligands directly or interact with ligand-binding proteins, transducing the signal to downstream signalling proteins in the cytoplasm. MCPs undergo two covalent modifications: deamidation and reversible methylation at a number of glutamate residues. Attractants increase the level of methylation, while repellents decrease it. The methyl groups are added by the methyl-transferase cheR and are removed by the methylesterase cheB. Most MCPs are homodimers that contain the following organisation: an N-terminal signal sequence that acts as a transmembrane domain in the mature protein; a poorly-conserved periplasmic receptor (ligand-binding) domain; a second transmembrane domain; and a highly-conserved C-terminal cytoplasmic domain that interacts with downstream signalling components. The C-terminal domain contains the glycosylated glutamate residues. This entry represents the ligand-binding domain found in a number of methyl-accepting chemotaxis receptors.; GO: 0004888 transmembrane signaling receptor activity, 0006935 chemotaxis, 0007165 signal transduction, 0016020 membrane; PDB: 2ASR_A 3ATP_A 2D4U_A 2LIG_A 1VLS_A 1LIH_A 1WAT_B 1VLT_B 1WAS_A 1JMW_A.
Probab=31.91 E-value=1.8e+02 Score=20.19 Aligned_cols=62 Identities=15% Similarity=0.119 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCh-hHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCChhhHHH
Q 037300 56 LESASAYCNDTYEQVKKLLNETKDK-TMRNCLDVCFQVYDL-AIYEIPTAIKYLESGDYDSAVQ 117 (159)
Q Consensus 56 i~~a~~~~~~a~~~i~~l~~~~~~~-~~k~al~~C~~~y~~-a~~~L~~a~~~l~~~~~~~~~~ 117 (159)
+..+.+....+...+..+......+ ..+...+.-.+.|.. ....|...+..+..+|+.+...
T Consensus 84 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~al~~~d~~~~~~ 147 (171)
T PF02203_consen 84 LARAEQNLEQAEQAFDAFKALPHASPEERALADELEASFDAYLQQALDPLLAALRAGDIAAFMQ 147 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHCS---GTGGHHHHHHHHHHHHH-HHHHHHHHHHHHHTT-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCcchHHHHHHHHHHHHHHHHHhHHHHHHHHHCCCHHHHHH
Confidence 3333444444445555555443333 778889999999999 7799999999999998765543
No 41
>PF08287 DASH_Spc19: Spc19; InterPro: IPR013251 Spc19 is a component of the DASH complex. The DASH complex associates with the spindle pole body and is important for spindle and kinetochore integrity during cell division [, ].
Probab=31.29 E-value=1.3e+02 Score=21.58 Aligned_cols=35 Identities=20% Similarity=0.401 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--ChhhHHHHHH
Q 037300 86 LDVCFQVYDLAIYEIPTAIKYLESG--DYDSAVQYAN 120 (159)
Q Consensus 86 l~~C~~~y~~a~~~L~~a~~~l~~~--~~~~~~~~ls 120 (159)
|++|..-...++..|+.+++.+..+ |+..+...|.
T Consensus 2 L~~cV~SL~~S~~lL~~Si~~L~~~~~D~pRL~kvL~ 38 (153)
T PF08287_consen 2 LSNCVSSLRSSVQLLQSSIETLDSGTSDFPRLTKVLQ 38 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHc
Confidence 5677777777777777777777664 4555554443
No 42
>PF02255 PTS_IIA: PTS system, Lactose/Cellobiose specific IIA subunit; InterPro: IPR003188 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIA PTS system enzymes. This family of proteins normally function as a homotrimer, stabilised by a centrally located metal ion []. Separation into subunits is thought to occur after phosphorylation.; GO: 0005351 sugar:hydrogen symporter activity, 0006810 transport, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016020 membrane; PDB: 3L8R_D 2E2A_B 1E2A_C 3K1S_C 2LRK_C 2LRL_A 2WY2_A 1WCR_A 2WWV_C.
Probab=31.14 E-value=1.1e+02 Score=19.89 Aligned_cols=27 Identities=22% Similarity=0.272 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHhcCChhhHHHHHHhh
Q 037300 96 AIYEIPTAIKYLESGDYDSAVQYANDG 122 (159)
Q Consensus 96 a~~~L~~a~~~l~~~~~~~~~~~lsaa 122 (159)
|...+-+|++..+.|+|+.++..+..|
T Consensus 14 Ars~~~eAl~~a~~~~fe~A~~~l~~a 40 (96)
T PF02255_consen 14 ARSLAMEALKAAREGDFEEAEELLKEA 40 (96)
T ss_dssp HHHHHHHHHHHHHTT-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 333344444444444444444444333
No 43
>TIGR00823 EIIA-LAC phosphotransferase system enzyme II, lactose-specific, factor III. operon. While the Lac permeases consist of two polypeptide chains (IIA and IICB), the Chb permease of E. coli consists of three (IIA, IIB and IIC). In B. subtilis, a PTS permease similar to the Chb permease of E. coli is believed to transport lichenan (a b-1,3;1,4 glucan) degradation products, oligosaccharides of 2-4 glucose units. This model is specific for the IIA subunit of the Lac PTS family.
Probab=29.24 E-value=1.2e+02 Score=19.91 Aligned_cols=27 Identities=22% Similarity=0.276 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHhcCChhhHHHHHHhh
Q 037300 96 AIYEIPTAIKYLESGDYDSAVQYANDG 122 (159)
Q Consensus 96 a~~~L~~a~~~l~~~~~~~~~~~lsaa 122 (159)
|....-+|++..+.|+|+.++..+..|
T Consensus 17 Ars~~~eAl~~a~~gdfe~A~~~l~eA 43 (99)
T TIGR00823 17 ARSKALEALKAAKAGDFAKARALVEQA 43 (99)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 444444444455555555444444433
No 44
>PHA00442 host recBCD nuclease inhibitor
Probab=26.56 E-value=1.4e+02 Score=17.47 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHH----HHHHHHHH
Q 037300 56 LESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCF----QVYDLAIY 98 (159)
Q Consensus 56 i~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~----~~y~~a~~ 98 (159)
+.++...-+....+|.+|.+ +.....||+.|. +-|++|++
T Consensus 8 VtitRd~wnd~q~yidsLek---~~~~L~~Lea~GVDNW~Gy~eA~e 51 (59)
T PHA00442 8 VTITRDAWNDMQGYIDSLEK---DNEFLKALRACGVDNWDGYMDAVE 51 (59)
T ss_pred eeecHHHHHHHHHHHHHHHH---hhHHHHHHHHcCCcchhhHHHHHH
Confidence 34556666677778888774 456677888885 44555443
No 45
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=26.14 E-value=1.4e+02 Score=17.03 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 037300 86 LDVCFQVYDLAIYEIPTAIKYL 107 (159)
Q Consensus 86 l~~C~~~y~~a~~~L~~a~~~l 107 (159)
|++=..+|..+..-+..+...|
T Consensus 22 Ldes~~lyeeg~~l~~~c~~~L 43 (53)
T PF02609_consen 22 LDESLKLYEEGMELIKKCQERL 43 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445555444444444433
No 46
>TIGR01280 xseB exodeoxyribonuclease VII, small subunit. This protein is the small subunit for exodeoxyribonuclease VII. Exodeoxyribonuclease VII is made of a complex of four small subunits to one large subunit. The complex degrades single-stranded DNA into large acid-insoluble oligonucleotides. These nucleotides are then degraded further into acid-soluble oligonucleotides.
Probab=24.69 E-value=1.5e+02 Score=17.94 Aligned_cols=22 Identities=14% Similarity=0.220 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 037300 86 LDVCFQVYDLAIYEIPTAIKYL 107 (159)
Q Consensus 86 l~~C~~~y~~a~~~L~~a~~~l 107 (159)
|++=..+|..++.-++.+...|
T Consensus 24 Leesl~lyeeG~~L~k~c~~~L 45 (67)
T TIGR01280 24 LEEALNLFERGMALARRCEKKL 45 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444433
No 47
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region
Probab=23.03 E-value=2.2e+02 Score=18.45 Aligned_cols=52 Identities=17% Similarity=0.226 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHH
Q 037300 48 VKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDLAIYE 99 (159)
Q Consensus 48 ~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~~a~~~ 99 (159)
..+|+.+++.....-....-..+..+++.-.|+..+-.+-.|..+|.-+...
T Consensus 7 li~Laa~ai~l~~~~~~~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~ 58 (97)
T PF12755_consen 7 LIGLAAVAIALGKDISKYLDEILPPVLKCFDDQDSRVRYYACEALYNISKVA 58 (97)
T ss_pred HHHHHHHHHHchHhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHH
Confidence 4566666666655522222333344454456777888999999999876543
No 48
>PRK00977 exodeoxyribonuclease VII small subunit; Provisional
Probab=22.56 E-value=1.7e+02 Score=18.45 Aligned_cols=39 Identities=26% Similarity=0.518 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHhcCC--hhhHHHHHHhhhhchhhccc
Q 037300 93 YDLAIYEIPTAIKYLESGD--YDSAVQYANDGIIESDTCEK 131 (159)
Q Consensus 93 y~~a~~~L~~a~~~l~~~~--~~~~~~~lsaa~~~~~tC~d 131 (159)
|..++.+|+..+..|..++ .++.-.....++.....|..
T Consensus 12 fEea~~~LEeIv~~LE~~~l~Lees~~lyeeg~~L~k~C~~ 52 (80)
T PRK00977 12 FEEALAELEEIVTRLESGDLPLEESLAAFERGVALARQCQK 52 (80)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444432 23333333333344444433
No 49
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=21.49 E-value=2e+02 Score=17.24 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHH
Q 037300 65 DTYEQVKKLLNETKDKTMRNCLDVCFQVYDLAIYEI 100 (159)
Q Consensus 65 ~a~~~i~~l~~~~~~~~~k~al~~C~~~y~~a~~~L 100 (159)
++.-.|+.+.+..++......|.+|.-.=+.++.+|
T Consensus 7 k~VQ~iKEiv~~hse~eIya~L~ecnMDpnea~qrL 42 (60)
T PF06972_consen 7 KTVQSIKEIVGCHSEEEIYAMLKECNMDPNEAVQRL 42 (60)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 344445554444467788889999988777777665
No 50
>PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=20.24 E-value=2.9e+02 Score=18.71 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=23.3
Q ss_pred hhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Q 037300 36 TLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKT 81 (159)
Q Consensus 36 ~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~ 81 (159)
.+..+|++.-+....|...-+........++......++.+..++.
T Consensus 37 l~~~~~~s~ya~~A~l~lA~~~~~~g~~~~A~~~l~~~~~~~~d~~ 82 (145)
T PF09976_consen 37 LAKDYPSSPYAALAALQLAKAAYEQGDYDEAKAALEKALANAPDPE 82 (145)
T ss_pred HHHHCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCHH
Confidence 4445555433344444444444444555566666666665544444
Done!