Query 037300
Match_columns 159
No_of_seqs 121 out of 1005
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 18:31:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cj4_A Invertase inhibitor; pr 100.0 1.6E-35 5.4E-40 210.8 15.4 144 15-158 2-149 (150)
2 1xg2_B Pectinesterase inhibito 100.0 4.5E-35 1.5E-39 208.8 15.5 144 16-159 2-151 (153)
3 1x91_A Invertase/pectin methyl 100.0 1.9E-34 6.5E-39 205.7 11.7 143 15-159 3-151 (153)
4 3iqc_A FLIS, flagellar protein 75.7 4.7 0.00016 27.1 4.7 27 45-71 22-48 (131)
5 1vh6_A Flagellar protein FLIS; 74.0 5.3 0.00018 27.3 4.7 27 45-71 19-45 (145)
6 1orj_A Flagellar protein FLIS; 66.0 7.3 0.00025 26.1 3.9 22 46-67 16-37 (130)
7 3dxr_B Mitochondrial import in 35.6 69 0.0024 20.1 4.5 32 78-109 56-87 (95)
8 3cjh_B Mitochondrial import in 34.5 65 0.0022 18.3 4.5 29 78-106 34-62 (64)
9 2bsk_B Mitochondrial import in 30.5 96 0.0033 19.0 5.0 33 77-109 42-74 (90)
10 3dxr_A Mitochondrial import in 28.8 1E+02 0.0035 18.8 5.0 32 78-109 50-81 (89)
11 2e2a_A Protein (enzyme IIA); h 27.3 98 0.0034 19.7 4.2 18 102-119 26-43 (105)
12 1wcr_A PTS system, N, N'-diace 26.2 1.1E+02 0.0036 19.5 4.2 24 97-120 19-42 (103)
13 3k1s_A PTS system, cellobiose- 26.0 1.1E+02 0.0036 19.7 4.2 15 103-117 29-43 (109)
14 3l8r_A PTCA, putative PTS syst 23.7 1.2E+02 0.0041 19.8 4.2 22 98-119 39-60 (120)
15 3cjh_A Mitochondrial import in 23.3 1E+02 0.0035 17.6 3.4 31 78-108 25-55 (64)
16 2bsk_A Mitochondrial import in 21.4 1.5E+02 0.0051 18.1 5.9 34 78-111 41-74 (89)
17 4fm3_A Uncharacterized hypothe 20.9 1.7E+02 0.0057 18.5 4.5 32 93-124 31-62 (98)
No 1
>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*
Probab=100.00 E-value=1.6e-35 Score=210.82 Aligned_cols=144 Identities=26% Similarity=0.409 Sum_probs=135.9
Q ss_pred CchHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Q 037300 15 EENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYD 94 (159)
Q Consensus 15 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~ 94 (159)
++++.|+.+|++|+||++|+++|.++|++..+|+++|+.+++++++.+++.+..++..+++..++|+.+.+|++|.++|+
T Consensus 2 a~~~~I~~~C~~T~~~~~C~~sL~~~~~s~~ad~~~la~~ai~~~~~~a~~~~~~i~~l~~~~~~~~~~~al~dC~e~y~ 81 (150)
T 2cj4_A 2 AMNNLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYK 81 (150)
T ss_dssp --CHHHHHHHHTSSCHHHHHHHHHTSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGHHHHHHHHHHHH
T ss_pred CchHHHHHHHcCCCCccHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Confidence 35689999999999999999999999998888999999999999999999999999999877678999999999999999
Q ss_pred HHH-HHHHHHHHHHhcCChhhHHHHHHhhhhchhhccc-CC--CCcccchhHHHHHHHHHHHHHHhcc
Q 037300 95 LAI-YEIPTAIKYLESGDYDSAVQYANDGIIESDTCEK-IP--KSPLTDRNNGLTNLCTIALDMINLF 158 (159)
Q Consensus 95 ~a~-~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d-f~--~spl~~~~~~~~~l~~ial~i~~~l 158 (159)
+++ +.|++++..+..++|+++++|+|+|+++++||+| |. ++||..++.++.+|++|+|+|+++|
T Consensus 82 ~a~~~~L~~a~~~l~~~~~~~~~t~lsaAlt~~~tC~dgf~~~~~pl~~~~~~~~~l~s~aLaii~~l 149 (150)
T 2cj4_A 82 VILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNL 149 (150)
T ss_dssp HHHHTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHTTTTSCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhhCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 999 7999999999999999999999999999999999 97 5899999999999999999999876
No 2
>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}
Probab=100.00 E-value=4.5e-35 Score=208.79 Aligned_cols=144 Identities=33% Similarity=0.563 Sum_probs=136.1
Q ss_pred chHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHH
Q 037300 16 ENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYDL 95 (159)
Q Consensus 16 ~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~~ 95 (159)
+.+.|+.+|++|+||++|+++|.++|++..+|+++|+.+++++++.+++.+..++..+.+...+|+.+.+|++|.++|++
T Consensus 2 ~~~~i~~~C~~T~~~~~C~~sL~~~~~~~~~~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~dC~e~y~~ 81 (153)
T 1xg2_B 2 ENHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYAD 81 (153)
T ss_dssp CCHHHHHHGGGSSCHHHHHHHHHTCTTGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHhcCCCChHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999987789999999999999999999999999998876789999999999999999
Q ss_pred HHHHHHHHHHHHhcCChhhHHHHHHhhhhchhhccc-CC-----CCcccchhHHHHHHHHHHHHHHhccC
Q 037300 96 AIYEIPTAIKYLESGDYDSAVQYANDGIIESDTCEK-IP-----KSPLTDRNNGLTNLCTIALDMINLFK 159 (159)
Q Consensus 96 a~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d-f~-----~spl~~~~~~~~~l~~ial~i~~~l~ 159 (159)
++++|++++..+..++|+++++|||+|+++++||+| |. ++||...+.++.+|++|+|+|+++|.
T Consensus 82 a~~~L~~a~~~l~~~~~~d~~t~lSaAlt~~~tC~dgf~~~~~~~~~l~~~~~~~~~l~s~aLai~~~l~ 151 (153)
T 1xg2_B 82 AIDSLGQAKQFLTSGDYNSLNIYASAAFDGAGTCEDSFEGPPNIPTQLHQADLKLEDLCDIVLVISNLLP 151 (153)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHhcccchHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999 97 24688999999999999999999874
No 3
>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A
Probab=100.00 E-value=1.9e-34 Score=205.72 Aligned_cols=143 Identities=24% Similarity=0.422 Sum_probs=132.5
Q ss_pred CchHHHHHHccCCCChhchHhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Q 037300 15 EENDLIEATCRKTSYPDLCIKTLRSSPGSSGADVKGLAHIILESASAYCNDTYEQVKKLLNETKDKTMRNCLDVCFQVYD 94 (159)
Q Consensus 15 ~~~~~i~~~C~~t~~~~~C~~~L~~~p~s~~~d~~~la~~ai~~a~~~~~~a~~~i~~l~~~~~~~~~k~al~~C~~~y~ 94 (159)
.+.+.|+.+|++|+||++|+++| +|++..+|+++|+.+++++++.+++.+..++..+.+...+|+.+.+|++|.++|+
T Consensus 3 a~~~~i~~~C~~T~~~~~C~~sL--~p~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~dC~e~y~ 80 (153)
T 1x91_A 3 MDSSEMSTICDKTLNPSFCLKFL--NTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYE 80 (153)
T ss_dssp --CCSTTTGGGGSSCHHHHHHHH--HHTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHhCCCCChhHHHHHh--CcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 45678999999999999999999 6777678999999999999999999999999999887678999999999999999
Q ss_pred HHHHHHHHHHHHHhcCChhhHHHHHHhhhhchhhccc-CC-----CCcccchhHHHHHHHHHHHHHHhccC
Q 037300 95 LAIYEIPTAIKYLESGDYDSAVQYANDGIIESDTCEK-IP-----KSPLTDRNNGLTNLCTIALDMINLFK 159 (159)
Q Consensus 95 ~a~~~L~~a~~~l~~~~~~~~~~~lsaa~~~~~tC~d-f~-----~spl~~~~~~~~~l~~ial~i~~~l~ 159 (159)
+++++|++++..+..++|+++++|||+|+++++||+| |. ++||...+.++.+|++|+|+|+++|.
T Consensus 81 ~a~~~L~~a~~~l~~~~~~d~~t~lSaAlt~~~tC~dgf~~~~~~~~~l~~~~~~~~~l~s~aLai~~~l~ 151 (153)
T 1x91_A 81 SAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLP 151 (153)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHccHhHHHHHhccCCCCcCHHHHHhHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999999 97 35689999999999999999999874
No 4
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=75.68 E-value=4.7 Score=27.06 Aligned_cols=27 Identities=7% Similarity=0.139 Sum_probs=16.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 037300 45 GADVKGLAHIILESASAYCNDTYEQVK 71 (159)
Q Consensus 45 ~~d~~~la~~ai~~a~~~~~~a~~~i~ 71 (159)
+++|.+|+.+-.+-+++....+...+.
T Consensus 22 tasP~~Li~mLydgal~~l~~A~~ai~ 48 (131)
T 3iqc_A 22 VESPAKLIEMLYEGILRFSSQAKRCIE 48 (131)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677766666666666666555443
No 5
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=74.04 E-value=5.3 Score=27.31 Aligned_cols=27 Identities=7% Similarity=0.118 Sum_probs=17.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 037300 45 GADVKGLAHIILESASAYCNDTYEQVK 71 (159)
Q Consensus 45 ~~d~~~la~~ai~~a~~~~~~a~~~i~ 71 (159)
+++|.+|+.+-.+-+++....+...+.
T Consensus 19 tAsP~~Li~mLydgal~~l~~A~~aie 45 (145)
T 1vh6_A 19 TATPGELTLMLYNGCLKFIRLAAQAIE 45 (145)
T ss_dssp -CCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457777777777777776666665554
No 6
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=65.98 E-value=7.3 Score=26.09 Aligned_cols=22 Identities=9% Similarity=0.012 Sum_probs=11.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH
Q 037300 46 ADVKGLAHIILESASAYCNDTY 67 (159)
Q Consensus 46 ~d~~~la~~ai~~a~~~~~~a~ 67 (159)
++|.+|+.+-.+-+++....+.
T Consensus 16 AsP~~Li~mLydgai~~l~~A~ 37 (130)
T 1orj_A 16 ATPLEQIILLYDKAIECLERAI 37 (130)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555554444443
No 7
>3dxr_B Mitochondrial import inner membrane translocase subunit TIM10; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=35.62 E-value=69 Score=20.05 Aligned_cols=32 Identities=19% Similarity=0.361 Sum_probs=25.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 037300 78 KDKTMRNCLDVCFQVYDLAIYEIPTAIKYLES 109 (159)
Q Consensus 78 ~~~~~k~al~~C~~~y~~a~~~L~~a~~~l~~ 109 (159)
.+..+..+++.|.+-|-++...+.+.+..+..
T Consensus 56 L~~~E~~Ci~~Cv~Ky~d~~~~V~~~~q~~~q 87 (95)
T 3dxr_B 56 LNKNESSCLDRCVAKYFETNVQVGENMQKMGQ 87 (95)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36688999999999999999888887766543
No 8
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=34.54 E-value=65 Score=18.32 Aligned_cols=29 Identities=14% Similarity=0.259 Sum_probs=23.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037300 78 KDKTMRNCLDVCFQVYDLAIYEIPTAIKY 106 (159)
Q Consensus 78 ~~~~~k~al~~C~~~y~~a~~~L~~a~~~ 106 (159)
.+..+..+++.|.+-|-++...+......
T Consensus 34 L~~~E~~Ci~~Cv~ky~~~~~~v~~~~~~ 62 (64)
T 3cjh_B 34 LSSQEEQCLSNCVNRFLDTNIRIVNGLQN 62 (64)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47789999999999999988877765543
No 9
>2bsk_B Mitochondrial import inner membrane translocase subunit TIM10; protein transport, mitochondrial protein import, TIM complex; 3.3A {Homo sapiens} SCOP: g.83.1.1
Probab=30.51 E-value=96 Score=19.00 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=27.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 037300 77 TKDKTMRNCLDVCFQVYDLAIYEIPTAIKYLES 109 (159)
Q Consensus 77 ~~~~~~k~al~~C~~~y~~a~~~L~~a~~~l~~ 109 (159)
..+..+..+++.|.+-|-++...+...+..+..
T Consensus 42 ~L~~~E~~Ci~~Cv~Ky~d~~~~V~~~~~~~~~ 74 (90)
T 2bsk_B 42 ELSKGESVCLDRCVSKYLDIHERMGKKLTELSM 74 (90)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357789999999999999999888887776654
No 10
>3dxr_A Mitochondrial import inner membrane translocase subunit TIM9; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=28.77 E-value=1e+02 Score=18.83 Aligned_cols=32 Identities=6% Similarity=0.130 Sum_probs=26.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 037300 78 KDKTMRNCLDVCFQVYDLAIYEIPTAIKYLES 109 (159)
Q Consensus 78 ~~~~~k~al~~C~~~y~~a~~~L~~a~~~l~~ 109 (159)
.+..+..+++.|.+-|-++...+......+..
T Consensus 50 L~~~E~~Ci~~Cv~Ky~~~~~~v~~~~~~~~~ 81 (89)
T 3dxr_A 50 LTNKEQTCIMKCSEKFLKHSERVGQRFQEQNA 81 (89)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788999999999999999988887776554
No 11
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=27.28 E-value=98 Score=19.72 Aligned_cols=18 Identities=33% Similarity=0.471 Sum_probs=7.1
Q ss_pred HHHHHHhcCChhhHHHHH
Q 037300 102 TAIKYLESGDYDSAVQYA 119 (159)
Q Consensus 102 ~a~~~l~~~~~~~~~~~l 119 (159)
+|+...+.|+|+.++..+
T Consensus 26 eAl~~Ak~g~fe~A~~~l 43 (105)
T 2e2a_A 26 EALKAAENGDFAKADSLV 43 (105)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHH
Confidence 333333444444333333
No 12
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=26.18 E-value=1.1e+02 Score=19.47 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHhcCChhhHHHHHH
Q 037300 97 IYEIPTAIKYLESGDYDSAVQYAN 120 (159)
Q Consensus 97 ~~~L~~a~~~l~~~~~~~~~~~ls 120 (159)
-...-+|+...+.|+|+.++..+.
T Consensus 19 rs~~~eAl~~Ak~g~fe~A~~~l~ 42 (103)
T 1wcr_A 19 RSLAYAALKQAKQGDFAAAKAMMD 42 (103)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 333334444444444444444443
No 13
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=26.02 E-value=1.1e+02 Score=19.72 Aligned_cols=15 Identities=20% Similarity=0.445 Sum_probs=5.7
Q ss_pred HHHHHhcCChhhHHH
Q 037300 103 AIKYLESGDYDSAVQ 117 (159)
Q Consensus 103 a~~~l~~~~~~~~~~ 117 (159)
|+...+.|+|+.++.
T Consensus 29 Al~~Ak~gdfe~A~~ 43 (109)
T 3k1s_A 29 ALQFAKQGKMAEADE 43 (109)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCHHHHHH
Confidence 333333344433333
No 14
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=23.73 E-value=1.2e+02 Score=19.84 Aligned_cols=22 Identities=18% Similarity=0.083 Sum_probs=8.9
Q ss_pred HHHHHHHHHHhcCChhhHHHHH
Q 037300 98 YEIPTAIKYLESGDYDSAVQYA 119 (159)
Q Consensus 98 ~~L~~a~~~l~~~~~~~~~~~l 119 (159)
...-+|+...+.|+|+.++..+
T Consensus 39 S~~~eAl~~Ak~gdfe~A~~~l 60 (120)
T 3l8r_A 39 SIVHEAFDAMREKNYILAEQKL 60 (120)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHH
Confidence 3333333344444444444433
No 15
>3cjh_A Mitochondrial import inner membrane translocase S TIM13; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=23.30 E-value=1e+02 Score=17.60 Aligned_cols=31 Identities=19% Similarity=0.214 Sum_probs=25.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 037300 78 KDKTMRNCLDVCFQVYDLAIYEIPTAIKYLE 108 (159)
Q Consensus 78 ~~~~~k~al~~C~~~y~~a~~~L~~a~~~l~ 108 (159)
.+..+..+++.|.+-|-++...+........
T Consensus 25 L~~~E~~Ci~~Cv~Ky~~~~~~v~~~~~~~~ 55 (64)
T 3cjh_A 25 YATRNDACIDQCLAKYMRSWNVISKAYISRI 55 (64)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667889999999999999988887765543
No 16
>2bsk_A Mitochondrial import inner membrane translocase subunit TIM9 A; protein transport, mitochondrial protein import, TIM complex; 3.3A {Homo sapiens} SCOP: g.83.1.1
Probab=21.43 E-value=1.5e+02 Score=18.11 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=29.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037300 78 KDKTMRNCLDVCFQVYDLAIYEIPTAIKYLESGD 111 (159)
Q Consensus 78 ~~~~~k~al~~C~~~y~~a~~~L~~a~~~l~~~~ 111 (159)
.+..+..+++.|.+-|-++...+......+....
T Consensus 41 L~~~E~~Ci~~Cv~Ky~d~~~~V~~~~~~~~~~~ 74 (89)
T 2bsk_A 41 VKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQ 74 (89)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999988887776543
No 17
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=20.91 E-value=1.7e+02 Score=18.47 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHhcCChhhHHHHHHhhhh
Q 037300 93 YDLAIYEIPTAIKYLESGDYDSAVQYANDGII 124 (159)
Q Consensus 93 y~~a~~~L~~a~~~l~~~~~~~~~~~lsaa~~ 124 (159)
+..+-+.|..|..++..++|..++...--+..
T Consensus 31 l~~A~dKl~~A~~Am~~~~y~~Ar~lAEqAe~ 62 (98)
T 4fm3_A 31 LKLAQDKYAAAQIAMTAESYKKARLLAEQAEL 62 (98)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 67789999999999999999999988766654
Done!