Query 037301
Match_columns 453
No_of_seqs 224 out of 1332
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 10:52:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037301.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037301hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0659 SUL1 Sulfate permease 100.0 5.1E-50 1.1E-54 429.1 35.9 370 47-452 21-413 (554)
2 PRK11660 putative transporter; 100.0 1E-45 2.2E-50 399.7 38.4 374 45-453 27-445 (568)
3 TIGR00815 sulP high affinity s 100.0 1.2E-44 2.5E-49 391.2 33.5 379 47-453 14-424 (563)
4 KOG0236 Sulfate/bicarbonate/ox 100.0 1.6E-37 3.4E-42 339.4 30.8 377 47-451 80-491 (665)
5 COG2252 Xanthine/uracil/vitami 100.0 9.1E-36 2E-40 305.8 37.0 375 29-450 4-409 (436)
6 PF03594 BenE: Benzoate membra 100.0 7.2E-34 1.6E-38 286.3 34.7 342 50-446 11-377 (378)
7 TIGR00843 benE benzoate transp 100.0 2.9E-32 6.2E-37 279.0 37.8 340 53-447 30-394 (395)
8 COG3135 BenE Uncharacterized p 100.0 2.7E-31 5.9E-36 262.3 30.8 330 62-453 38-399 (402)
9 PF00916 Sulfate_transp: Sulfa 100.0 4.3E-32 9.3E-37 268.4 11.1 253 136-419 1-279 (280)
10 TIGR03173 pbuX xanthine permea 99.9 4E-24 8.7E-29 222.9 35.0 349 60-450 13-403 (406)
11 TIGR00801 ncs2 uracil-xanthine 99.9 1.4E-21 3.1E-26 204.2 35.2 352 60-450 23-414 (415)
12 PRK10720 uracil transporter; P 99.9 2.6E-19 5.6E-24 187.8 34.2 344 60-453 32-410 (428)
13 PF00860 Xan_ur_permease: Perm 99.8 1.8E-17 3.8E-22 172.1 26.7 327 76-435 39-384 (389)
14 TIGR03616 RutG pyrimidine util 99.8 1.2E-15 2.6E-20 160.2 37.6 287 60-399 48-358 (429)
15 COG2233 UraA Xanthine/uracil p 99.6 4E-13 8.6E-18 139.9 27.3 309 60-410 34-376 (451)
16 PRK11412 putative uracil/xanth 99.6 1E-11 2.2E-16 130.3 36.2 300 60-398 26-352 (433)
17 TIGR00834 ae anion exchange pr 98.4 0.00091 2E-08 75.9 33.2 311 74-405 401-789 (900)
18 PF13792 Sulfate_tra_GLY: Sulf 98.3 1.6E-06 3.4E-11 71.0 7.0 64 47-110 16-80 (84)
19 PF11840 DUF3360: Protein of u 98.0 0.00085 1.9E-08 68.3 19.4 287 43-380 54-383 (492)
20 KOG1292 Xanthine/uracil transp 97.9 0.0043 9.3E-08 65.4 23.3 298 60-398 30-383 (510)
21 KOG1172 Na+-independent Cl/HCO 97.8 0.0088 1.9E-07 66.9 26.2 307 76-404 394-764 (876)
22 PF00955 HCO3_cotransp: HCO3- 95.5 0.0062 1.4E-07 65.5 1.8 99 75-174 66-171 (510)
23 COG4392 Predicted membrane pro 84.9 5.5 0.00012 34.0 7.8 72 378-450 33-105 (107)
24 PF05437 AzlD: Branched-chain 79.2 6.9 0.00015 32.5 6.4 68 379-449 29-99 (99)
25 TIGR03173 pbuX xanthine permea 78.1 44 0.00094 35.0 13.5 100 67-173 241-345 (406)
26 TIGR00801 ncs2 uracil-xanthine 76.7 36 0.00078 35.9 12.4 101 67-174 256-362 (415)
27 TIGR00843 benE benzoate transp 74.9 30 0.00066 36.4 11.0 94 67-165 245-343 (395)
28 COG2233 UraA Xanthine/uracil p 72.0 6.1 0.00013 42.2 5.2 84 363-449 111-217 (451)
29 PRK11412 putative uracil/xanth 70.8 28 0.00061 37.1 9.9 91 77-174 278-368 (433)
30 PF02308 MgtC: MgtC family; I 68.5 85 0.0018 27.8 11.3 39 414-452 83-123 (134)
31 TIGR00815 sulP high affinity s 68.0 1.9E+02 0.0042 31.7 16.0 83 73-164 290-372 (563)
32 PRK10720 uracil transporter; P 66.3 22 0.00048 37.7 8.0 91 77-174 263-353 (428)
33 TIGR03616 RutG pyrimidine util 64.2 54 0.0012 34.9 10.4 87 362-448 114-213 (429)
34 PF03594 BenE: Benzoate membra 53.7 1.1E+02 0.0023 32.1 10.1 92 68-164 230-326 (378)
35 PF00860 Xan_ur_permease: Perm 53.0 1.3E+02 0.0027 31.4 10.8 100 68-174 255-360 (389)
36 PF07178 TraL: TraL protein; 49.2 42 0.00091 27.9 5.3 37 414-450 19-55 (95)
37 PF08566 Pam17: Mitochondrial 42.3 76 0.0016 29.6 6.2 13 28-40 24-36 (173)
38 PF00916 Sulfate_transp: Sulfa 41.6 56 0.0012 31.9 5.8 83 73-164 178-260 (280)
39 PRK11660 putative transporter; 41.2 5.2E+02 0.011 28.4 15.6 85 73-166 310-394 (568)
40 TIGR00834 ae anion exchange pr 40.6 1.6E+02 0.0035 34.5 9.8 82 316-397 398-493 (900)
41 PF06166 DUF979: Protein of un 36.0 4.5E+02 0.0097 26.8 10.9 24 318-341 150-173 (308)
42 PRK13707 conjugal transfer pil 33.2 98 0.0021 26.2 5.1 37 414-450 25-61 (101)
43 PTZ00016 aquaglyceroporin; Pro 31.9 2.9E+02 0.0063 27.9 9.1 13 2-14 4-16 (294)
44 KOG3142 Prenylated rab accepto 29.3 3.9E+02 0.0085 25.2 8.8 59 385-444 85-156 (187)
45 PF01384 PHO4: Phosphate trans 28.5 6.5E+02 0.014 25.7 11.6 124 317-450 17-146 (326)
46 COG0659 SUL1 Sulfate permease 26.6 9E+02 0.019 26.7 15.2 81 74-163 280-360 (554)
47 TIGR00931 antiport_nhaC Na+/H+ 25.5 3.5E+02 0.0076 29.0 8.9 77 54-138 123-207 (454)
48 COG3333 Uncharacterized protei 23.6 9.6E+02 0.021 26.0 20.1 33 145-177 158-191 (504)
49 COG3135 BenE Uncharacterized p 20.2 6.8E+02 0.015 26.3 9.2 104 57-165 223-342 (402)
No 1
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-50 Score=429.06 Aligned_cols=370 Identities=18% Similarity=0.268 Sum_probs=288.9
Q ss_pred hhhHHHhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHhCCcccc-ch---hHHHHHHHHHcCCCCCHHHH
Q 037301 47 KWAEINGAMGDLGTYIPIVLALTLAKDLDLGTTLIFTGIYNIVTGAIYGVPMPV-QP---MKSIAAVAISNGSDFGIPEI 122 (453)
Q Consensus 47 ~~~e~~g~l~~l~t~lPl~la~a~~aGlp~~~~l~~~gl~~iv~gl~~~~Pl~v-~p---~~a~aa~~i~~~~~~~~~~~ 122 (453)
.+.|+-+++++...++|++|+|+.++|+||++|||++.+.+++.+++.++|..+ +| |+...+-.++.....+++.+
T Consensus 21 l~~Dl~AGltva~valP~ama~a~~aGv~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~~i~~~~~~g~~~~ 100 (554)
T COG0659 21 LRGDLLAGLTVAAVALPLAMAFAIAAGVPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVIASLVETGLALA 100 (554)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHHHHHHHHHHHHHHH
Confidence 458988889999999999999999999999999999999999999999998543 45 44444444441113677888
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhcccccc-----c----cccCCCCccch
Q 037301 123 MAAGICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAK-----S----KVKGNRHWLGL 193 (453)
Q Consensus 123 ~~A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~-----~----~~l~~~~~~~~ 193 (453)
..+++++|++|+++|++|+ |++++|||+||+.||++|+|+.|+.+|++.++|.+...+ . ....+.+ .
T Consensus 101 ~~~tllaGv~~i~~G~lRL-G~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~~~~~~~~~~~~l~~~~~~~~---~ 176 (554)
T COG0659 101 FLATLLAGVFQILLGLLRL-GRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLASKVSGFWAKVSALFTVLLTIN---L 176 (554)
T ss_pred HHHHHHHHHHHHHHHHHHh-hhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchHHHHHHHHHhccccc---H
Confidence 8899999999999999997 999999999999999999999999999999998764221 0 0122333 3
Q ss_pred hHHHHHHHHHHHHHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCc--ccccc--cC
Q 037301 194 DGLVLAIVCACFIIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNV--VKDIN--FG 269 (453)
Q Consensus 194 ~~~~l~~~~l~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~--~~~i~--~g 269 (453)
.+++++++++++++ .+ +|+.+|+|+.++++++++.+++.++.+. .+++. ++
T Consensus 177 ~~~~lg~~~l~il~-~~------------------------~~~~~~~P~~liaiv~~t~i~~~~~~~~~~~G~i~~~lp 231 (554)
T COG0659 177 ATLLLGLLTLAILL-FL------------------------PRLTPRIPSPLIALVLGTLIVWIFPLDSLRYGEIPGSLP 231 (554)
T ss_pred HHHHHHHHHHHHHH-Hc------------------------cchhhhCCcHHHHHHHHHHHHHHhcCCchhcccCcccCC
Confidence 47889999888776 34 3567899999999999999988876542 23221 11
Q ss_pred CCcccccccChhhhHHhHHhhhcchhHHHHHHHHHH-HHHHHhhhCCCCCCCCChhHHHHhHHHHHhhhcCccccccccc
Q 037301 270 PSSIEVLKITKHAWKEGFIKGTIPQLPLSVLNSVIA-VCKLSADLFPGKHFSATSVSVTVGLMNLVGCWFGAMPCCHGAG 348 (453)
Q Consensus 270 ~~~P~~~~p~~~~~~~~~~~l~lp~l~ltll~svia-~~~la~~~~~~~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~~ 348 (453)
...|++..|+++ + .....+....+.+++++.+.+ +++..-|...+.+.|.|||+++||++|+++++|||+|.|++.+
T Consensus 232 ~~~~~~~~P~~~-~-~~~~~l~~~al~la~lg~iesllta~~~~~~~~~~~d~nrELiaqGiaNi~sglfgg~p~~g~~s 309 (554)
T COG0659 232 SGLPHFRLPNVS-L-SLLLALLPYALALALLGLLESLLTAVSFDGMTGTKHDSNRELIAQGIANIASGLFGGIPATGSIS 309 (554)
T ss_pred cCCCcccCCCCC-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHhhHHHHHHHHhCCccccchhH
Confidence 245555556543 1 112222222233344333322 2223335444559999999999999999999999999999999
Q ss_pred cccccccCCCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHHHHHhhcc---c--ccchhHHHHHH
Q 037301 349 GLAGQYKFGGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIELAMASRD---M--NSKEEFFVMLV 423 (453)
Q Consensus 349 ~sa~n~~~GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~L~~~~~~---~--~~~~~~~v~~~ 423 (453)
||+.|.++|||||+|+++||++++++.+++++ ++++||.++|++++++++++|.+.... . ..|.|..++++
T Consensus 310 rS~~nv~sGarT~lsgi~~a~~lll~l~~~~~----~~~~IP~a~Laavli~v~~~l~~~~~~~~~~~~~~~~e~~v~~~ 385 (554)
T COG0659 310 RSAINIKSGARTRLSGIIHAALLLLLLLFLAP----LVSYIPLAALAAVLILVGWGLLDWSLLKPLLRKLPRGELLVLLT 385 (554)
T ss_pred HHHHHHHhCCcChHHHHHHHHHHHHHHHHHHH----HHHhCcHHHHHHHHHHHHHHhccHHHHHHHHhcCCchhHHHHHH
Confidence 99999999999999999999999999999888 999999999999999999999986432 1 36777887777
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhhc
Q 037301 424 CTSVSLVGSSAALGFVCGIVVHVLLKIRK 452 (453)
Q Consensus 424 t~~~~~~~~~l~~Gi~~Gi~v~~~l~~~~ 452 (453)
|++.++ +.|+..|+.+|++++.++..||
T Consensus 386 t~~~tv-~~~l~~GV~vGi~ls~~~~i~r 413 (554)
T COG0659 386 TALLTV-FFDLVIGVVVGILLACLLFIRR 413 (554)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 777666 6899999999999999888775
No 2
>PRK11660 putative transporter; Provisional
Probab=100.00 E-value=1e-45 Score=399.67 Aligned_cols=374 Identities=21% Similarity=0.301 Sum_probs=283.4
Q ss_pred chhhhHHHhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHhCCc-cccchhHHHHHHHHHcCCCCCHHHHH
Q 037301 45 QSKWAEINGAMGDLGTYIPIVLALTLAKDLDLGTTLIFTGIYNIVTGAIYGVP-MPVQPMKSIAAVAISNGSDFGIPEIM 123 (453)
Q Consensus 45 ~~~~~e~~g~l~~l~t~lPl~la~a~~aGlp~~~~l~~~gl~~iv~gl~~~~P-l~v~p~~a~aa~~i~~~~~~~~~~~~ 123 (453)
+..+.|+.++++...+.+||+|+||..+|+||.+|+|++.+.+++.+++.++| +.++|.++.++.......+++.+.+.
T Consensus 27 ~~l~~D~iAGltv~~~~iPq~mayA~lag~pp~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~~~~~~~~~~~~ 106 (568)
T PRK11660 27 ARFTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLL 106 (568)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHHHHHHhhHHHHH
Confidence 33458988889999999999999999999999999999999999999998877 56678766554432211135666777
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhcccccc-----------ccccCCCCccc
Q 037301 124 AAGICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAK-----------SKVKGNRHWLG 192 (453)
Q Consensus 124 ~A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~-----------~~~l~~~~~~~ 192 (453)
.+++++|++++++|++|+ |++.++||+||+.||++|+|++|+.+|+++++|.+.... ..++++.+|
T Consensus 107 ~~~~l~Gii~~l~gllrl-G~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~~~~~~~~~~~~l~~~~~~l~~~~~-- 183 (568)
T PRK11660 107 VATLMSGIILILMGLARL-GRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHVPEHYLEKVGALFQALPTINW-- 183 (568)
T ss_pred HHHHHHHHHHHHHHHHhh-hHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHHhhccCCH--
Confidence 789999999999999997 899999999999999999999999999999998753210 012344554
Q ss_pred hhHHHHHHHHHHHHHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCc-----ccc--
Q 037301 193 LDGLVLAIVCACFIIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNV-----VKD-- 265 (453)
Q Consensus 193 ~~~~~l~~~~l~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~-----~~~-- 265 (453)
.+.++++.++++++. + +|+.+|+|+.++++++++++++.++... +++
T Consensus 184 -~~~~~~~~~l~lll~-~------------------------~~~~~~iP~~li~iiv~t~~~~~~~~~~~~v~~vg~~~ 237 (568)
T PRK11660 184 -GDALIGIVTLGVLIL-W------------------------PRLKIRLPGHLPALLAGTAVMGVLNLLGGHVATIGSRF 237 (568)
T ss_pred -HHHHHHHHHHHHHHH-H------------------------HhhcccCchHHHHHHHHHHHHHHHhccCCCceeecccc
Confidence 477888888877763 3 2456789999999999999887765321 111
Q ss_pred ---c-------ccCCCcccccccCh----------hhhHHhHHhhhcchhHHHHHHHHHHH-HHHHhhhCCCCCCCCChh
Q 037301 266 ---I-------NFGPSSIEVLKITK----------HAWKEGFIKGTIPQLPLSVLNSVIAV-CKLSADLFPGKHFSATSV 324 (453)
Q Consensus 266 ---i-------~~g~~~P~~~~p~~----------~~~~~~~~~l~lp~l~ltll~svia~-~~la~~~~~~~~~~~~~e 324 (453)
+ ..++..|++..|.. .||. .+..+....+.+++++.+..+ +....|...+++.|.|||
T Consensus 238 ~~~~~~g~~~~~ip~~~p~~~~p~~~~~~~~~~~~~~~~-~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~~~~~d~n~E 316 (568)
T PRK11660 238 HYVLADGSQGNGIPPLLPQFVLPWNLPGADGQPFTLSWD-LIRALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHSANSE 316 (568)
T ss_pred cccccccccccCCCCCCCCCCCCccccccccccCCcCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHH
Confidence 0 01123454444420 0221 111222222333333332222 112223344678999999
Q ss_pred HHHHhHHHHHhhhcCccccccccccccccccCCCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHH
Q 037301 325 SVTVGLMNLVGCWFGAMPCCHGAGGLAGQYKFGGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIE 404 (453)
Q Consensus 325 l~a~GlaNl~~~~fGg~p~~~s~~~sa~n~~~GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~ 404 (453)
+.++|++|+++++|||+|+|++.+||++|+++||||+++++++|+++++..++++| +++++|++++|+++++++++
T Consensus 317 L~a~G~aNi~~~~fgg~p~~~s~srSa~n~~aGarT~la~iv~a~~~ll~ll~l~~----ll~~iP~~vLa~ili~~~~~ 392 (568)
T PRK11660 317 LVGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPISAVIHALLVLLALLVLAP----LLSYLPLSAMAALLLMVAWN 392 (568)
T ss_pred HHHHhHHHHHHHHhCcccccchHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH----HHHhCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998788888 99999999999999999999
Q ss_pred HHHhhcc---cc--cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhcC
Q 037301 405 LAMASRD---MN--SKEEFFVMLVCTSVSLVGSSAALGFVCGIVVHVLLKIRKF 453 (453)
Q Consensus 405 L~~~~~~---~~--~~~~~~v~~~t~~~~~~~~~l~~Gi~~Gi~v~~~l~~~~~ 453 (453)
|.+..+. ++ +|.|.++++.|++.++ ++++.+|+++|++++.++..||+
T Consensus 393 m~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~gi~~Gi~~s~~~~~~~~ 445 (568)
T PRK11660 393 MSEAHKVVDLLRHAPKDDIIVMLLCMSLTV-LFDMVIAISVGIVLASLLFMRRI 445 (568)
T ss_pred hhhHHHHHHHHHhCCHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHH
Confidence 9986432 22 5678888888877777 58999999999999999887663
No 3
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=100.00 E-value=1.2e-44 Score=391.19 Aligned_cols=379 Identities=16% Similarity=0.192 Sum_probs=277.8
Q ss_pred hhhHHHhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHhCCc-cccchhHHHHHHH---HHcC-CCCC---
Q 037301 47 KWAEINGAMGDLGTYIPIVLALTLAKDLDLGTTLIFTGIYNIVTGAIYGVP-MPVQPMKSIAAVA---ISNG-SDFG--- 118 (453)
Q Consensus 47 ~~~e~~g~l~~l~t~lPl~la~a~~aGlp~~~~l~~~gl~~iv~gl~~~~P-l~v~p~~a~aa~~---i~~~-~~~~--- 118 (453)
.+.|+.++++...+.+||+|+||..+|+||.+|+|++.+.+++.+++.++| +.++|.++.+.+. +.+. .+.+
T Consensus 14 l~~Di~aGltv~~~~iP~~~ayA~laglpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~~~~~~~~ 93 (563)
T TIGR00815 14 FKGDLMAGLTVGILLIPQAMAYAILAGLSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVGLQYLFDC 93 (563)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhcCCCCccc
Confidence 358988889999999999999999999999999999999999999999977 5667865555332 2221 1111
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhcccc-cc----------cccc
Q 037301 119 --IPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDF-AK----------SKVK 185 (453)
Q Consensus 119 --~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~-~~----------~~~l 185 (453)
.+.+...++++|++|+++|++|+ |++++|+|+||+.||++|+|+.|+.+|+++++|.+.. .. ...+
T Consensus 94 ~~~~~a~~l~~l~Gi~~~~~g~lrl-G~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~l 172 (563)
T TIGR00815 94 DAIRLAFTLTLLAGIFQVILGLLRL-GFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTLGVVISTWAGL 172 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHh
Confidence 22344567999999999999997 8999999999999999999999999999999997641 10 1123
Q ss_pred CCCCccchhHHHHHHHHHHHHHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCc---
Q 037301 186 GNRHWLGLDGLVLAIVCACFIIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNV--- 262 (453)
Q Consensus 186 ~~~~~~~~~~~~l~~~~l~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~--- 262 (453)
++.+-++..+++++++++++++. . ++.+++.++++...+|..++++++++.+...++.+.
T Consensus 173 ~~~~~~~~~~~~i~~~~~~~l~~-~----------------~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~~~~~ 235 (563)
T TIGR00815 173 PNTHNWNWCTLVIGLVLLLFLLY-T----------------KKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGV 235 (563)
T ss_pred hhccccchHHHHHHHHHHHHHHH-H----------------HHhhhhccchhcccccHHHHHHHHHHHHHHHHccCCCCe
Confidence 33311123477788877776652 3 111111111223446999999999988877664332
Q ss_pred --ccccccCCCcccccc--cChhhhHHhHHhhhcchhHHHHHHHHHHHHHHHhhhCCCCCCCCChhHHHHhHHHHHhhhc
Q 037301 263 --VKDINFGPSSIEVLK--ITKHAWKEGFIKGTIPQLPLSVLNSVIAVCKLSADLFPGKHFSATSVSVTVGLMNLVGCWF 338 (453)
Q Consensus 263 --~~~i~~g~~~P~~~~--p~~~~~~~~~~~l~lp~l~ltll~svia~~~la~~~~~~~~~~~~~el~a~GlaNl~~~~f 338 (453)
+++++.+ +|.+.. ++|+++. ..+..++....+++++++. .+... +...+++.|+|||+.++|++|+++++|
T Consensus 236 ~~~g~ip~g--~p~~~~~~~~~~~~~-~l~~~a~~ia~v~~~e~l~-~a~~~-~~~~~~~~d~n~El~a~G~~N~~~~~f 310 (563)
T TIGR00815 236 SILGHIPSG--LSFFPPITLDWELLP-TLAPDAIAIAIVGLIESIA-IARSF-ARMTGYKIDANQELVAQGIANIVGSFF 310 (563)
T ss_pred EEEeecCCC--CCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHH-HHHhCCCCCCcHHHHHhhHHHHHHHHh
Confidence 2333333 233333 3444442 2222221111122222221 11111 222356899999999999999999999
Q ss_pred CccccccccccccccccCCCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHHHHHhhcc---cc-c
Q 037301 339 GAMPCCHGAGGLAGQYKFGGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIELAMASRD---MN-S 414 (453)
Q Consensus 339 Gg~p~~~s~~~sa~n~~~GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~L~~~~~~---~~-~ 414 (453)
||+|+|++.+||+.|+++||||+++++++|++++++.++++| +++++|++++|+++++++++|.+.... ++ +
T Consensus 311 g~~p~~~s~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~~~~----~l~~iP~~~la~ili~~~~~l~~~~~~~~~~~~~ 386 (563)
T TIGR00815 311 SCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTP----LFYYIPQAALAAIIISAVRGLIDYKELYKLWKAD 386 (563)
T ss_pred CccCCCCcchHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHH----HHHhChHHHHHHHHHHHHhcccCHHHHHHHHcCC
Confidence 999999999999999999999999999999999998888887 999999999999999999999876432 23 6
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhcC
Q 037301 415 KEEFFVMLVCTSVSLVGSSAALGFVCGIVVHVLLKIRKF 453 (453)
Q Consensus 415 ~~~~~v~~~t~~~~~~~~~l~~Gi~~Gi~v~~~l~~~~~ 453 (453)
+.|.+++++|+++++ ++|+.+|+++|++++.+...+|+
T Consensus 387 ~~d~~i~~~~~~~~~-~~~~~~Gi~vGv~~s~~~~~~~~ 424 (563)
T TIGR00815 387 KMDFVVWLVTFFGVV-FTSIEIGLLVGVALSAAFLLLRI 424 (563)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 889999999988888 57999999999999999988763
No 4
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-37 Score=339.42 Aligned_cols=377 Identities=18% Similarity=0.229 Sum_probs=274.1
Q ss_pred hhhHHHhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHhC-CccccchhHHHHHHHH---Hc----CC---
Q 037301 47 KWAEINGAMGDLGTYIPIVLALTLAKDLDLGTTLIFTGIYNIVTGAIYG-VPMPVQPMKSIAAVAI---SN----GS--- 115 (453)
Q Consensus 47 ~~~e~~g~l~~l~t~lPl~la~a~~aGlp~~~~l~~~gl~~iv~gl~~~-~Pl~v~p~~a~aa~~i---~~----~~--- 115 (453)
.+.|+.++++.-.+.+||+++||..+|+||.+|||.+.+..++..++.- ++++++|....+.+.- .+ ..
T Consensus 80 l~~DliaGltvg~l~VPQ~iaYa~la~lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~ 159 (665)
T KOG0236|consen 80 LLGDLIAGLTVGSLSVPQGLAYALLAGLPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSN 159 (665)
T ss_pred chHHHhcCceeeeeecchHHHHHHHcCCChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCc
Confidence 4478777788778999999999999999999999998887777644433 6799998655543322 11 00
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccc--------c
Q 037301 116 --DFGIPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKV--------K 185 (453)
Q Consensus 116 --~~~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~--------l 185 (453)
...++.+...++++|++|+++|++|+ |++++|+|++++.||+.|+++.+..+|+|.++|......... .
T Consensus 160 ~~~~~i~va~~lt~l~Giiq~~mG~lrL-Gfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~ 238 (665)
T KOG0236|consen 160 DIATTIQVATTLTFLTGIIQLILGLLRL-GFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVF 238 (665)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeH
Confidence 13455566678999999999999997 999999999999999999999999999999999873321110 0
Q ss_pred C--CCCccchhHHHHHHHHHHHHHHHhccCcchhhhhhccccccchhhhhhhhhc-ccchHHHHHHHHHHHHHHHhcCCc
Q 037301 186 G--NRHWLGLDGLVLAIVCACFIIIVNGAGEESAEREANDHEEERPKRSRLRRIV-ASLPSAFIVFLLGVILAFVRRPNV 262 (453)
Q Consensus 186 ~--~~~~~~~~~~~l~~~~l~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~iP~aLi~vv~g~~l~~~~~~~~ 262 (453)
. ...|....++.+++.++.+++. . +...+++++++. -.+|..++++++++++.+.++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~l~~l~~L~~-~----------------k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~ 301 (665)
T KOG0236|consen 239 DLLANLPKTLATLVLSLIFLVVLLL-T----------------KELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEG 301 (665)
T ss_pred HhhhcccccchhhhhHHHHHHHHHH-H----------------HHhhhhhcccceeecccHHHHHHHHHHHHHHHhcccc
Confidence 0 0111002367788888777663 3 101111112222 466788999999999988766532
Q ss_pred ------ccccccCCCcccccccChhhhHHhHHhhhcchhHHHHHHHHHHHHHHHhhhCCCCCCCCChhHHHHhHHHHHhh
Q 037301 263 ------VKDINFGPSSIEVLKITKHAWKEGFIKGTIPQLPLSVLNSVIAVCKLSADLFPGKHFSATSVSVTVGLMNLVGC 336 (453)
Q Consensus 263 ------~~~i~~g~~~P~~~~p~~~~~~~~~~~l~lp~l~ltll~svia~~~la~~~~~~~~~~~~~el~a~GlaNl~~~ 336 (453)
+.+++. .+|+...|.++.+.. ...-++.....+++.. ++++...+++. +.+.|.|||++|+|++|++++
T Consensus 302 ~~~~~~~~~i~~--g~~~~~lp~~~~~~~-~~~~~~~i~iva~~~~-iai~k~fa~~~-~y~vd~nqELiAlG~~Ni~sS 376 (665)
T KOG0236|consen 302 RYGPIIVGEIPR--GFPPPSLPPLSLTPQ-VIPDAFAIAIVALLEH-IAIGKSFASLH-GYKVDSNQELIALGISNILSS 376 (665)
T ss_pred ccCCeeeccCCC--CCCCCCCCChhhhHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHh-CCeeCCChHHHHHHHHHHhhh
Confidence 123332 455555665543321 1111111111222322 44554443322 568999999999999999999
Q ss_pred hcCccccccccccccccccCCCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHH-HHHhh---ccc
Q 037301 337 WFGAMPCCHGAGGLAGQYKFGGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIE-LAMAS---RDM 412 (453)
Q Consensus 337 ~fGg~p~~~s~~~sa~n~~~GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~-L~~~~---~~~ 412 (453)
+|+++|.|++.+||++|+++|+||++++++.++++++..++++| +++++|+++||++++.++.. |.+.. ..+
T Consensus 377 ff~~~p~tgs~sRSav~~~sG~~T~~s~i~~~~~vl~~l~~l~p----~f~~iP~~vLaaIIi~a~~~~l~~~~~~~~lw 452 (665)
T KOG0236|consen 377 FFGCYPTTGSFSRSAVNIKSGGRTQVAGIVSAALVLLALLFLGP----LFYYIPKCVLAAIIISALIGMLIQLEDLKPLW 452 (665)
T ss_pred hhceEcccchhhHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHHHHHHHhhHHHhhhhhhhhhe
Confidence 99999999999999999999999999999999999998888888 99999999999999999998 44433 223
Q ss_pred c-cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhh
Q 037301 413 N-SKEEFFVMLVCTSVSLVGSSAALGFVCGIVVHVLLKIR 451 (453)
Q Consensus 413 ~-~~~~~~v~~~t~~~~~~~~~l~~Gi~~Gi~v~~~l~~~ 451 (453)
+ +|.|.++.+.|+..++ +.++.+|+++|+..+.+..+.
T Consensus 453 r~~k~D~~~~~~t~~~~i-~~~ve~Glligv~~s~~~ii~ 491 (665)
T KOG0236|consen 453 RLSKIDLLIWVVTFFTTI-FLSLEIGLLIGVAFSLFFIIL 491 (665)
T ss_pred eCCHHHHHHHHHHhheee-EehhhhhHHHHHHHHHHHHHH
Confidence 3 7999999998888888 589999999999999877654
No 5
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=100.00 E-value=9.1e-36 Score=305.78 Aligned_cols=375 Identities=17% Similarity=0.236 Sum_probs=284.5
Q ss_pred CcHHHHHHHhhhccccchhhhHHHhHHHHHHHHHHHHHH------HHHHcCCChhhHHH----HHHHHHHHHHHHhCCcc
Q 037301 29 NSPAKIIHKVKKNLVFQSKWAEINGAMGDLGTYIPIVLA------LTLAKDLDLGTTLI----FTGIYNIVTGAIYGVPM 98 (453)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~e~~g~l~~l~t~lPl~la------~a~~aGlp~~~~l~----~~gl~~iv~gl~~~~Pl 98 (453)
...+|+|+..++|+++| +|+ +++++||+.++|. +...+|+|.++.++ .+++++++||++.|.|+
T Consensus 4 ~~~~~~F~l~~~~t~vr---tEi---iAGlTTFltM~YIl~VnP~IL~~ag~~~~av~~AT~l~a~~gs~~mgl~An~P~ 77 (436)
T COG2252 4 GDLDRFFKLKEHGTTVR---TEV---IAGLTTFLTMAYIVFVNPQILGAAGMPVGAVFVATCLAAAIGSIAMGLYANLPI 77 (436)
T ss_pred hHHHHHhCccccCchHH---HHH---HHHHHHHHHHHHhheecHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHcCch
Confidence 46789999999999999 999 8899999999998 77888999887776 45788999999999999
Q ss_pred ccch---hHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhh--
Q 037301 99 PVQP---MKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYI-- 173 (453)
Q Consensus 99 ~v~p---~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~-- 173 (453)
+++| .|+..++.+..+++++||+++++++++|+++++++++|+|+|+.|.||++++.|+.+|||++|++.++++.
T Consensus 78 alapgmglnAfFaftvv~~~gi~wq~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIGlFia~IgL~~~Gi 157 (436)
T COG2252 78 ALAPGMGLNAFFAFTVVLGMGLSWQVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIGLFIALIGLKNAGI 157 (436)
T ss_pred hhcchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhCCe
Confidence 9998 68999999998888999999999999999999999999999999999999999999999999999999942
Q ss_pred -hhccccccccccCCCCccchhHHHHHHHHHHHHHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHH-
Q 037301 174 -RNVQDFAKSKVKGNRHWLGLDGLVLAIVCACFIIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLG- 251 (453)
Q Consensus 174 -~g~~~~~~~~~l~~~~~~~~~~~~l~~~~l~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g- 251 (453)
++++.. ...+|+.+ .+.+++++.++++.+.+. .+|++++++..++.
T Consensus 158 vv~~~~t--lv~LG~~~---~p~vll~i~G~~l~~~L~---------------------------~~~i~Gaili~i~~~ 205 (436)
T COG2252 158 VVANPAT--LVALGDFT---SPGVLLAILGLLLIIVLV---------------------------SRKIKGAILIGILVT 205 (436)
T ss_pred EEecCcc--eEEeecCC---CchHHHHHHHHHHHHHHH---------------------------HhhccHhhhHHHHHH
Confidence 233322 33456554 246778888877776545 35678877654443
Q ss_pred HHHHHHhcCCcccccccCCCcccccccCh--hhhHHhHHhhhcchhHHHHH--------HHHHHHHHHHhhhCCC--CCC
Q 037301 252 VILAFVRRPNVVKDINFGPSSIEVLKITK--HAWKEGFIKGTIPQLPLSVL--------NSVIAVCKLSADLFPG--KHF 319 (453)
Q Consensus 252 ~~l~~~~~~~~~~~i~~g~~~P~~~~p~~--~~~~~~~~~l~lp~l~ltll--------~svia~~~la~~~~~~--~~~ 319 (453)
..+++..+...... +. ...|+...|.+ .|+.........-...+++. ++++++...+ ...++ +-.
T Consensus 206 t~~g~~~g~~~~~~-~~-~~~~p~~~~~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~a-g~~~~~g~~~ 282 (436)
T COG2252 206 TILGIILGIDVHFG-GL-VGAPPSLSPIFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKA-GLLDKNGKMP 282 (436)
T ss_pred HHHHHHhccccccc-cc-ccCCCCccchhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhc-CCcCCCCCcc
Confidence 55666655321111 00 11111112222 23321011111001223322 2333332222 12221 235
Q ss_pred CCChhHHHHhHHHHHhhhcCccccccccccccccccCCCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHH
Q 037301 320 SATSVSVTVGLMNLVGCWFGAMPCCHGAGGLAGQYKFGGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLL 399 (453)
Q Consensus 320 ~~~~el~a~GlaNl~~~~fGg~p~~~s~~~sa~n~~~GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi 399 (453)
+.+|.+.+.+++.++++.+|+.|++ ....|++..+.|+||++++++.|+++++. +|++| ++..+|..+.++.|+
T Consensus 283 ~~~~al~~D~v~t~~ga~~GtS~~t-~yIESaaGva~GgrTGltavv~g~lFl~~-lf~~P----l~~~vP~~AtapaLi 356 (436)
T COG2252 283 RIGKALLADSVATVVGALFGTSTVT-AYIESAAGVAAGGRTGLTAVVTGLLFLLS-LFFSP----LAALVPGYATAPALI 356 (436)
T ss_pred ccchHHHHhHHHHHHHHhcCCcchh-hhhhcccccccccccccHHHHHHHHHHHH-HHHHH----HHHhCcHhhhhHHHH
Confidence 7889999999999999999999987 34444444568999999999999999985 88888 999999999999999
Q ss_pred HHHHHHHHhhccc--ccchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHh
Q 037301 400 FAGIELAMASRDM--NSKEEFFVMLVCTSVSLVGSSAALGFVCGIVVHVLLKI 450 (453)
Q Consensus 400 ~~g~~L~~~~~~~--~~~~~~~v~~~t~~~~~~~~~l~~Gi~~Gi~v~~~l~~ 450 (453)
++|..|.+..+++ +|.+|+++.|+|.+.+++++|+..|+.+|++.|.+.|.
T Consensus 357 ~vG~lM~~~v~~id~~d~~ea~PaF~tiv~mplTySIa~Gia~Gfi~y~i~k~ 409 (436)
T COG2252 357 IVGALMLSSVKQIDWSDFTEAVPAFLTIVMMPLTYSIADGIAFGFISYVILKV 409 (436)
T ss_pred HHHHHHHhhhccCCchhhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999987654 58899999999999999999999999999999999885
No 6
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=100.00 E-value=7.2e-34 Score=286.34 Aligned_cols=342 Identities=19% Similarity=0.280 Sum_probs=269.6
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHcCCChh-------hHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHH
Q 037301 50 EINGAMGDLGTYIPIVLALTLAKDLDLG-------TTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEI 122 (453)
Q Consensus 50 e~~g~l~~l~t~lPl~la~a~~aGlp~~-------~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~ 122 (453)
.+...+.+.+-=..+.+.-+..+|++++ +..+..|+.++.++++||.|+.++|.++.+|+.++...+++++|+
T Consensus 11 G~va~lvg~tg~~aiv~qaa~a~g~s~~q~~SWl~al~~~~Gl~~i~lSl~yR~Pi~~AWStPGaAlL~~~~~~~~~~ea 90 (378)
T PF03594_consen 11 GFVAVLVGYTGPVAIVLQAAQAAGASPAQIASWLFALYLGMGLTSILLSLRYRMPIVTAWSTPGAALLATSLPGYSFAEA 90 (378)
T ss_pred HHHHHHhhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcchHHHHHHHHhccCCCHHHH
Confidence 3434445555556677778888999987 445577999999999999999999999999998887678999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchhHHHHHHHH
Q 037301 123 MAAGICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLDGLVLAIVC 202 (453)
Q Consensus 123 ~~A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~~~~l~~~~ 202 (453)
+++++++|++.+++|++|+++|++|+||.++..+|++|+.+.++++-++.+- +.+ .+.+.+.
T Consensus 91 vGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGvLl~f~l~~f~a~~------------~~P------~l~~~ml 152 (378)
T PF03594_consen 91 VGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGVLLPFGLAAFTALQ------------ADP------LLVGPML 152 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH------------hHH------HHHHHHH
Confidence 9999999999999999999999999999999999999999999999988772 223 2344555
Q ss_pred HHHHHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCcccccccCCCcccccccChhh
Q 037301 203 ACFIIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNVVKDINFGPSSIEVLKITKHA 282 (453)
Q Consensus 203 l~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~~~~i~~g~~~P~~~~p~~~~ 282 (453)
+.+++ . ||+.||+ +.+.+++.|+.++...+.....+.+.....|.+..|+|+.
T Consensus 153 ~~~l~--~------------------------~r~~pr~-av~~al~~g~~~a~~~g~~~~~~~~~~~~~p~~~~P~Fs~ 205 (378)
T PF03594_consen 153 AVFLL--A------------------------RRFSPRY-AVLAALVAGVAVAALTGQLHPSALQLSLAHPVFTTPEFSW 205 (378)
T ss_pred HHHHH--H------------------------HHHcchh-HHHHHHHHHHHHHHhcCCCCccccccccceeEEECCcccH
Confidence 55554 3 2577888 5777788888877765543333344446788999999873
Q ss_pred hHHhHHhhhcchhHHHHHHH-HHHHHHHHhhhCCCCCCCCChhHHHHhHHHHHhhhcCcccccccc------cccccccc
Q 037301 283 WKEGFIKGTIPQLPLSVLNS-VIAVCKLSADLFPGKHFSATSVSVTVGLMNLVGCWFGAMPCCHGA------GGLAGQYK 355 (453)
Q Consensus 283 ~~~~~~~l~lp~l~ltll~s-via~~~la~~~~~~~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~------~~sa~n~~ 355 (453)
.+++++++|++..|+.+- +-++..+-++ +.+++.|+.....|++|++.++|||+++|-++ .+.++ ++
T Consensus 206 --~a~v~lalPL~ivtmasQnlpG~aVL~a~---GY~~p~~~~~~~tGl~s~l~ApfGg~~~nlAaitaAIc~g~ea-h~ 279 (378)
T PF03594_consen 206 --SALVSLALPLFIVTMASQNLPGIAVLRAA---GYQPPVNPLITVTGLASLLAAPFGGHAVNLAAITAAICAGPEA-HP 279 (378)
T ss_pred --HHHHHHHHHHHHHHHHhcchHHHHHHHHc---CCCCCchHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHcCCcc-CC
Confidence 688899988775554321 1222223222 34899999999999999999999999998643 45554 46
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHHHHHh--------hcccccchhHHHHHHHHHH
Q 037301 356 FGGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIELAMA--------SRDMNSKEEFFVMLVCTSV 427 (453)
Q Consensus 356 ~GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~L~~~--------~~~~~~~~~~~v~~~t~~~ 427 (453)
+..|++.+++.+|++|+++++| ++.++.++..+|.+.++++ +|+.|... .++.++|+.++++|+++.+
T Consensus 280 dp~rRy~Aav~~Gv~yll~Gl~-a~~~v~l~~~lP~~li~~l---AGLALlg~l~~sl~~A~~~~~~r~aAlvtFlvtaS 355 (378)
T PF03594_consen 280 DPSRRYIAAVAAGVFYLLFGLF-AAALVALFAALPPALIAAL---AGLALLGTLGGSLQTAFSDEKYREAALVTFLVTAS 355 (378)
T ss_pred CcccchHHHHHHhHHHHHHHHH-HHHHHHHHHhCCHHHHHHH---HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHc
Confidence 8899999999999999999998 6789999999999999775 66666543 3344568889999999999
Q ss_pred HHHHh---HHHHHHHHHHHHHH
Q 037301 428 SLVGS---SAALGFVCGIVVHV 446 (453)
Q Consensus 428 ~~~~~---~l~~Gi~~Gi~v~~ 446 (453)
++.++ +.+||+++|++++.
T Consensus 356 Gisl~gIgaafWgLv~G~~~~~ 377 (378)
T PF03594_consen 356 GISLLGIGAAFWGLVAGLLVHL 377 (378)
T ss_pred CCCcccccHHHHHHHHHHHHHh
Confidence 99775 79999999999875
No 7
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=100.00 E-value=2.9e-32 Score=279.05 Aligned_cols=340 Identities=16% Similarity=0.241 Sum_probs=260.3
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCChh-------hHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHH
Q 037301 53 GAMGDLGTYIPIVLALTLAKDLDLG-------TTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAA 125 (453)
Q Consensus 53 g~l~~l~t~lPl~la~a~~aGlp~~-------~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A 125 (453)
+.+.+++-=..+.+.-+...|+++. +.++.+|+.+++.+++||.|+..+|.++.+|+..+...++++++++++
T Consensus 30 a~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti~lS~~~r~Pi~~awStPGaAll~~~~~~~~~~eavGA 109 (395)
T TIGR00843 30 AVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGIFLSIRFKTPVLTAWSAPGAALLVTGFPGISLNEAIAA 109 (395)
T ss_pred HHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeecCchHHHHHHHhcCCCCHHHHHHH
Confidence 3344444445666677888899976 455688999999999999999999999999988766557999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchhHHHHHHHHHHH
Q 037301 126 GICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLDGLVLAIVCACF 205 (453)
Q Consensus 126 ~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~~~~l~~~~l~~ 205 (453)
++++|++++++|++|.++|++|+||+++..||++|+++.++++.++.+. +.+ ++...+.+++
T Consensus 110 fiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f~l~~~~a~~------------~~p------ll~~~mll~~ 171 (395)
T TIGR00843 110 FITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQFGLGAFAALD------------GLF------LICFSMLLCW 171 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH------------HhH------HHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888877662 222 1122222223
Q ss_pred HHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCcccccccCCCcccccccChhhhHH
Q 037301 206 IIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNVVKDINFGPSSIEVLKITKHAWKE 285 (453)
Q Consensus 206 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~~~~i~~g~~~P~~~~p~~~~~~~ 285 (453)
++ . +|+.|| |+.++++++|+++++..+....++.......|.+..|+|+ + .
T Consensus 172 l~--~------------------------~r~~Pr-~avl~aLlvG~iva~~~G~~~~~~~~~~l~~p~~~~P~fs-~-~ 222 (395)
T TIGR00843 172 LA--S------------------------KAFAPR-YAMIAALICGIAFSFALGDMNPTDLDFKIALPQFIAPDFS-F-A 222 (395)
T ss_pred HH--H------------------------HHhcch-HHHHHHHHHHHHHHHHhcCCCccccccccccceeeCCCCC-H-H
Confidence 22 2 245565 6899999999999887664333333333456778888883 4 5
Q ss_pred hHHhhhcchhHHHHHHHH-HHHHHHHhhhCCCCCCCCChhHHHHhHHHHHhhhcCccccccc------cccccccccCCC
Q 037301 286 GFIKGTIPQLPLSVLNSV-IAVCKLSADLFPGKHFSATSVSVTVGLMNLVGCWFGAMPCCHG------AGGLAGQYKFGG 358 (453)
Q Consensus 286 ~~~~l~lp~l~ltll~sv-ia~~~la~~~~~~~~~~~~~el~a~GlaNl~~~~fGg~p~~~s------~~~sa~n~~~Ga 358 (453)
+.++.++|+++.++.+.. -++..+.. .+.+++.|+.....|++|+++++||++++|-+ +.+.++| ++++
T Consensus 223 a~~~l~lPl~~vtm~~qnlpgiavl~a---aGy~~p~~~~~~~tGl~sll~ApfGg~~~nlaaitaAic~G~~ah-~d~~ 298 (395)
T TIGR00843 223 HSLNLALPLFLVSLAGQFAPGIAALKA---AGYNAPAKPIIAAAGLAALFAAFAGGISIGIAAITAAICMGKDAH-EDKD 298 (395)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHH---cCCCCCchHHHHHHHHHHHHHhccCCchhhhhHHhHHHhcCcccc-cCcC
Confidence 778899999887776532 11222221 13366789999999999999999999994322 1334554 4599
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHHHHHh--------hcccccchhHHHHHHHHHHHHH
Q 037301 359 RSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIELAMA--------SRDMNSKEEFFVMLVCTSVSLV 430 (453)
Q Consensus 359 RT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~L~~~--------~~~~~~~~~~~v~~~t~~~~~~ 430 (453)
||+.+++..|++++++++|.+ .++.++..+|.+.++++ +|+.|... .++.++|+.++++|+++.+++.
T Consensus 299 rR~~a~i~~Gv~yll~glfag-~i~~l~~~~P~~li~~l---aGlAll~~~~~~l~~a~~~~~~r~~a~~tflvtaSg~~ 374 (395)
T TIGR00843 299 KRWIAAAAAGIFYLLAGLFAG-AITALFAALPKELIAAL---AGLALLGAIAGNIKIALHEDQERDAALIAFLATASGLH 374 (395)
T ss_pred ccchHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHH---HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhcCC
Confidence 999999999999999999854 89999999999999875 56655543 3455678889999999999997
Q ss_pred Hh---HHHHHHHHHHHHHHH
Q 037301 431 GS---SAALGFVCGIVVHVL 447 (453)
Q Consensus 431 ~~---~l~~Gi~~Gi~v~~~ 447 (453)
++ +.+||+++|++++.+
T Consensus 375 ~~gigaafWgl~~G~~~~~~ 394 (395)
T TIGR00843 375 FLGIGSAFWGLCAGGLAYFI 394 (395)
T ss_pred cccccHHHHHHHHHHHHHHh
Confidence 76 799999999988764
No 8
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.7e-31 Score=262.34 Aligned_cols=330 Identities=19% Similarity=0.296 Sum_probs=264.9
Q ss_pred HHHHHHHHHHcCCChh-------hHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Q 037301 62 IPIVLALTLAKDLDLG-------TTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILF 134 (453)
Q Consensus 62 lPl~la~a~~aGlp~~-------~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~l 134 (453)
+-..+.-++++|.++. +..+..|+.++..+++||.|+..+|.++.+++.+++..+++..|++++++++|++++
T Consensus 38 ~aii~~aa~a~gas~aq~aSwl~al~l~mGv~ti~Ls~~yR~Pv~~aWSTPG~all~asl~g~s~~eaVGAfiVt~~li~ 117 (402)
T COG3135 38 LAIIIQAAQAAGASPAQIASWLTALGLAMGVSTLTLSLRYRVPVLTAWSTPGAALLVASLGGLSFAEAVGAFIVTGALII 117 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccceeeeecCccHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence 3444556777899876 334467899999999999999999999999999988778999999999999999999
Q ss_pred HHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchhHHHHHHHHHHHHHHHhccCc
Q 037301 135 VLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLDGLVLAIVCACFIIIVNGAGE 214 (453)
Q Consensus 135 llGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~~~~l~~~~l~~li~l~~~~~ 214 (453)
+.|++|.++|+++.||+++..+|++||.+.++++.++.+ ...++ +...+.+.+++ .
T Consensus 118 l~G~~~~l~rl~~~IP~sla~AmlAGILL~F~l~a~~a~------------~~~p~------l~lpmv~~~ll--~---- 173 (402)
T COG3135 118 LCGLTGPLTRLMRIIPPSLAAAMLAGILLRFGLKAFKAL------------PTQPL------LVLPMVLAYLL--A---- 173 (402)
T ss_pred HHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcc------------CCChH------HHHHHHHHHHH--H----
Confidence 999999999999999999999999999999999998866 23332 23444444443 3
Q ss_pred chhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCcccccccCCCcccccccChhhhHHhHHhhhcch
Q 037301 215 ESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNVVKDINFGPSSIEVLKITKHAWKEGFIKGTIPQ 294 (453)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~~~~i~~g~~~P~~~~p~~~~~~~~~~~l~lp~ 294 (453)
|.+.+|+ +...+.++|+.++...+..........++.|++..|+|+. .+.+++++|.
T Consensus 174 --------------------r~f~pr~-aV~aalvvgv~va~~~G~~~~~~~~~~~~~p~~v~P~Fs~--~A~l~lalPL 230 (402)
T COG3135 174 --------------------RVFAPRY-AVIAALVVGVLVAALLGDLHTALVALEISTPTWVTPEFSF--AAMLSLALPL 230 (402)
T ss_pred --------------------HHcCchH-HHHHHHHHHHHHHHHhCcccccccccccCcceeeCCcccH--HHHHHHhHHH
Confidence 2455655 6777778888887776643222333346789999999874 5788888775
Q ss_pred hHHHHHHHHHHHHHHHhhhCCC--------CCCCCChhHHHHhHHHHHhhhcCcccccccc------ccccccccCCCcc
Q 037301 295 LPLSVLNSVIAVCKLSADLFPG--------KHFSATSVSVTVGLMNLVGCWFGAMPCCHGA------GGLAGQYKFGGRS 360 (453)
Q Consensus 295 l~ltll~svia~~~la~~~~~~--------~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~------~~sa~n~~~GaRT 360 (453)
. +..+++||.|+ .+++++......|+.++.+++||++.+|-++ .+.++ |++.+|+
T Consensus 231 ~----------lvtmasQN~pGiAvLka~gY~pp~~pl~~~TGl~sll~ApfG~~t~nLaAItAAic~gpda-HpD~~rr 299 (402)
T COG3135 231 F----------LVTMASQNLPGIAVLKAAGYQPPPSPLIVATGLASLLSAPFGGHTVNLAAITAAICTGPDA-HPDPARR 299 (402)
T ss_pred H----------HHHHHhccCccceeehhcCCCCCCchHHHHhHHHHHHhcccccceecHHHHHHHHhcCCCC-CCChHHH
Confidence 4 23466788775 3789999999999999999999999998653 45555 5789999
Q ss_pred hHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHHHHH--------hhcccccchhHHHHHHHHHHHHHHh
Q 037301 361 GGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIELAM--------ASRDMNSKEEFFVMLVCTSVSLVGS 432 (453)
Q Consensus 361 ~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~L~~--------~~~~~~~~~~~~v~~~t~~~~~~~~ 432 (453)
+++++++|++++++++| +++++.++..+|.+.+..+ +|+.|.. ..+|.++|+.+.++|+++.+++.++
T Consensus 300 y~Aa~~agi~ylv~GlF-~~~~~~l~~alP~~li~~l---AGLALlg~~~~~l~~A~~~~~~R~aAlvtF~VTaSG~tl~ 375 (402)
T COG3135 300 YTAALVAGIFYLLAGLF-GGALVGLMAALPASLIAAL---AGLALLGTLGNSLQAALKDEREREAALVTFLVTASGLTLF 375 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHCcHHHHHHH---HHHHHHHHHHHHHHHHhcCcccchhhhhheeehhccceee
Confidence 99999999999999998 6799999999999998664 5555544 3344567888999999999999765
Q ss_pred ---HHHHHHHHHHHHHHHHHhhcC
Q 037301 433 ---SAALGFVCGIVVHVLLKIRKF 453 (453)
Q Consensus 433 ---~l~~Gi~~Gi~v~~~l~~~~~ 453 (453)
+.+||+++|.+++.+..+||.
T Consensus 376 GIgaafWGLvaG~~~~~L~~~~~~ 399 (402)
T COG3135 376 GIGAAFWGLVAGLLVLALLNLRRR 399 (402)
T ss_pred cccHHHHHHHHHHHHHHHHhhhhc
Confidence 789999999999999988763
No 9
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.97 E-value=4.3e-32 Score=268.38 Aligned_cols=253 Identities=21% Similarity=0.297 Sum_probs=178.1
Q ss_pred HHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccc---ccc-ccc-------cCC-CCccchhHHHHHHHHH
Q 037301 136 LGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQD---FAK-SKV-------KGN-RHWLGLDGLVLAIVCA 203 (453)
Q Consensus 136 lGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~---~~~-~~~-------l~~-~~~~~~~~~~l~~~~l 203 (453)
+|++|+ |++.||+|+||+.||++|+|+.++.+|++.++|.++ .+. ... +.+ .+| .+..+++.++
T Consensus 1 lGllrl-G~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l 76 (280)
T PF00916_consen 1 LGLLRL-GFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLFSFIRALFQLISTITNW---PTLAIGLVAL 76 (280)
T ss_pred Cccccc-cHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhhhhhccch---hhhhhhhHHH
Confidence 588997 999999999999999999999999999999999762 111 011 111 133 3666777666
Q ss_pred HHHHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCc-----ccccccCCCccccccc
Q 037301 204 CFIIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNV-----VKDINFGPSSIEVLKI 278 (453)
Q Consensus 204 ~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~-----~~~i~~g~~~P~~~~p 278 (453)
.++.... ..++++++|+.+++|..++++++++.+++....+. +++++. ..|++..|
T Consensus 77 ~~l~~~~-----------------~~~~~~~~~~~~~~p~~li~vv~~~~~~~~~~~~~~~v~~~~~i~~--~lp~~~~p 137 (280)
T PF00916_consen 77 VFLLIIR-----------------LLPKRLPSRFWPPIPAPLIVVVLGTLLSWLFLLDKYGVAIVGEIPS--GLPPPSLP 137 (280)
T ss_pred HHHhhhh-----------------hhhhhccccccccccccceeeehhhhhhhhhhhccccccccccccc--cCccccCc
Confidence 6554222 11111224677889999999999988876654321 223332 35555556
Q ss_pred ----ChhhhHHhHHhhhcchhHHHHHHHHHHHHH-HHhhhCCCCCCCCChhHHHHhHHHHHhhhcCcccccccccccccc
Q 037301 279 ----TKHAWKEGFIKGTIPQLPLSVLNSVIAVCK-LSADLFPGKHFSATSVSVTVGLMNLVGCWFGAMPCCHGAGGLAGQ 353 (453)
Q Consensus 279 ----~~~~~~~~~~~l~lp~l~ltll~svia~~~-la~~~~~~~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~~~sa~n 353 (453)
+|+.+. ......+.+++++.+..+.. -.-|...+++.|.|||++++|++|+++++|||+|+|++.+||++|
T Consensus 138 ~~~~~~~~~~----~~~~~a~~ia~v~~~~s~~~~~~~~~~~~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~srs~~~ 213 (280)
T PF00916_consen 138 SFDISWSLIL----DLLPTALAIAIVGFIESLLIAKSIAKKTGYRIDPNQELIALGLANIVSGLFGGMPGSGSFSRSAVN 213 (280)
T ss_pred cccccccccc----ccchhHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHhhhccccchhhcccccccccccchHH
Confidence 232221 11111122333322221111 111223356889999999999999999999999999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHHHHHhhcc---cc-cchhHH
Q 037301 354 YKFGGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIELAMASRD---MN-SKEEFF 419 (453)
Q Consensus 354 ~~~GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~L~~~~~~---~~-~~~~~~ 419 (453)
+++|||||+|++++|++++++.+++++ +++++|++++|+++++++++|.+.... ++ +|.|.+
T Consensus 214 ~~~Ga~t~~s~~~~~~~~l~~l~~~~~----~l~~iP~~~La~ili~~~~~l~~~~~~~~~~~~~~~d~~ 279 (280)
T PF00916_consen 214 YRAGARTRLSGLISALFVLLVLLFLAP----LLAYIPKAVLAAILIVVGISLIDWSSLRRLWRVSKADFL 279 (280)
T ss_pred HhcCcceeehhHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhcCChhheE
Confidence 999999999999999999998888877 999999999999999999999987543 23 566653
No 10
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=99.94 E-value=4e-24 Score=222.86 Aligned_cols=349 Identities=18% Similarity=0.216 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHHcCCCh-------hhHHHHHHHHHHHHHHH-----hCCccccchhHHHHHHHHHcCCCCCHHHHHHHHH
Q 037301 60 TYIPIVLALTLAKDLDL-------GTTLIFTGIYNIVTGAI-----YGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGI 127 (453)
Q Consensus 60 t~lPl~la~a~~aGlp~-------~~~l~~~gl~~iv~gl~-----~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~l 127 (453)
...|.. .+.+.|+|+ .+.++++|+++++..+. .|.|+..+|..+..+..++...+++|+++.++.+
T Consensus 13 i~~p~i--~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~ 90 (406)
T TIGR03173 13 VAVPLI--VGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVI 90 (406)
T ss_pred HHHHHH--HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 345544 445579998 57788899999999643 3789999997666665555444689999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchhHHHHHHHHHHHHH
Q 037301 128 CTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLDGLVLAIVCACFII 207 (453)
Q Consensus 128 l~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~~~~l~~~~l~~li 207 (453)
++|++++++| +.++++.|++|+.|+-.+.+.+|+.+.-.++++..+.+.. ++ +.+.....+++.++++++
T Consensus 91 v~Gii~illg--~~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~------~~--~~~~~~~~l~l~~l~~~i 160 (406)
T TIGR03173 91 VAGLFVILLA--PFFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGA------PD--FGSPQNLGLALLTLVIIL 160 (406)
T ss_pred HHHHHHHHHH--HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCc------cc--ccchHHHHHHHHHHHHHH
Confidence 9999999999 3569999999998888888899999988888877543211 11 111124556766666554
Q ss_pred HHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCcccccc-cC-CCcc---cccccChhh
Q 037301 208 IVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNVVKDIN-FG-PSSI---EVLKITKHA 282 (453)
Q Consensus 208 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~~~~i~-~g-~~~P---~~~~p~~~~ 282 (453)
++. |+. ++ ..|.|+.++++++++++++.++..+.+++. .+ ...| ++..|+|+
T Consensus 161 l~~--------------------~~~-~~-~~~~~aiLi~ivvg~iva~~~g~~~~~~i~~~~~~~~P~~~~~~~P~f~- 217 (406)
T TIGR03173 161 LLN--------------------RFG-KG-FLRSIAVLLGLVVGTIVAAALGMVDFSGVAEAPWFALPTPFHFGAPTFD- 217 (406)
T ss_pred HHH--------------------HHh-hh-HHHHhHHHHHHHHHHHHHHHhcCCCchhhccCCeeeCCCCCcCCCCeeC-
Confidence 222 111 12 234579999999999998877642222211 00 1223 23445442
Q ss_pred hHHhHHhhhcchhHHHHHHHHHHHHHHHhhhCCCC---CCCCChhHHHHhHHHHHhhhcCccccccccccccccccCCCc
Q 037301 283 WKEGFIKGTIPQLPLSVLNSVIAVCKLSADLFPGK---HFSATSVSVTVGLMNLVGCWFGAMPCCHGAGGLAGQYKFGGR 359 (453)
Q Consensus 283 ~~~~~~~l~lp~l~ltll~svia~~~la~~~~~~~---~~~~~~el~a~GlaNl~~~~fGg~p~~~s~~~sa~n~~~GaR 359 (453)
+. ..... +.....++.+++-...+.. +. .++ +.+.|||+.++|++|+++++||++|+|.....++.+...|+|
T Consensus 218 ~~-~~~~~-~~~~lv~~~esig~~~a~~-~~-~g~~~~~~~~~~~l~~~Gi~~i~aglfG~~p~t~~~~~~~~~~~tg~~ 293 (406)
T TIGR03173 218 LV-AILTM-IIVYLVSMVETTGDFLALG-EI-TGRPITEKDLAGGLRADGLGSALGGLFNTFPYTSFSQNVGLVQLTGVK 293 (406)
T ss_pred HH-HHHHH-HHHHHHHHHHHHHHHHHHH-HH-hCCCCCchhccchHHhccHHHHHHHHhCCCCCcchhhhHHHHHHhCCC
Confidence 21 11111 1111122222221111111 11 122 345789999999999999999999999644444666778999
Q ss_pred chHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHH-------HHHHHHHHhhcccccchhHHHHHHHHHHHHHH-
Q 037301 360 SGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLL-------FAGIELAMASRDMNSKEEFFVMLVCTSVSLVG- 431 (453)
Q Consensus 360 T~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi-------~~g~~L~~~~~~~~~~~~~~v~~~t~~~~~~~- 431 (453)
||.+.+++|+++++++++ |.+.++++.+|.++++++++ ..|+++.+. .+.++|++.++.-+....++..
T Consensus 294 sr~~~~~~~~~lil~~l~--~~~~~l~~~iP~~vlgg~~l~~~~~i~~~g~~~l~~-~~~~~~rn~~i~g~~~~~g~~~~ 370 (406)
T TIGR03173 294 SRYVVAAAGVILVLLGLF--PKLAALVASIPQPVLGGAGLVMFGMVAASGIRILSK-VDFDRRRNLLIVAVSLGLGLGPT 370 (406)
T ss_pred chHhHHHHHHHHHHHHHH--HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHh-CcccCcceehhhHHHHHHHHHHH
Confidence 999999999999987776 45556999999999999644 333333322 2233444544444443333310
Q ss_pred --------------hHHHHHHHHHHHHHHHHHh
Q 037301 432 --------------SSAALGFVCGIVVHVLLKI 450 (453)
Q Consensus 432 --------------~~l~~Gi~~Gi~v~~~l~~ 450 (453)
.=...|+..|.+++.++++
T Consensus 371 ~~p~~~~~~p~~~~~~~~~~~~~g~~~ai~l~~ 403 (406)
T TIGR03173 371 VVPEFFSQLPAWAQTLFSSGIAVGAISAILLNL 403 (406)
T ss_pred hhHHHHHHChHHHHHHHhCcHHHHHHHHHHHHh
Confidence 0122567777777666653
No 11
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=99.91 E-value=1.4e-21 Score=204.24 Aligned_cols=352 Identities=21% Similarity=0.231 Sum_probs=226.5
Q ss_pred HHHHHHHHHHHHcCCChh-------hHHHHHHHHHHHHHHHhCCc----cccchhHHHHHHHHHcCCCCCHHHHHHHHHH
Q 037301 60 TYIPIVLALTLAKDLDLG-------TTLIFTGIYNIVTGAIYGVP----MPVQPMKSIAAVAISNGSDFGIPEIMAAGIC 128 (453)
Q Consensus 60 t~lPl~la~a~~aGlp~~-------~~l~~~gl~~iv~gl~~~~P----l~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll 128 (453)
+..|+.++-+. +|++ +.++.+|+++++.+++.+.| ...++.-++.+..+....+++|+++.++.++
T Consensus 23 i~~p~iv~~~~---l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~ 99 (415)
T TIGR00801 23 VLVPLLVGLAP---LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIA 99 (415)
T ss_pred HHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 67888887666 5543 56668899999999887765 3334433444444443346789999999999
Q ss_pred HHHHHHHHHHH--h-HHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchhHHHHHHHHHHH
Q 037301 129 TGGILFVLGVT--G-LMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLDGLVLAIVCACF 205 (453)
Q Consensus 129 ~G~i~lllGl~--r-l~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~~~~l~~~~l~~ 205 (453)
+|+++++++++ | .++|+.|++|+.|+..+..+||+.++..+++++.+....+.. ++ +-+...+.+++.++++
T Consensus 100 ~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~~---~~--~~~~~~~~vg~~~l~~ 174 (415)
T TIGR00801 100 TGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMSS---AT--YGSLENLGVAFVVLAL 174 (415)
T ss_pred HHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCcccc---cc--cCchhhHHHHHHHHHH
Confidence 99999999985 4 467899999999999999999999999999988654321100 11 1112256677777776
Q ss_pred HHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCcccccc-cC-CCccccccc--Chh
Q 037301 206 IIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNVVKDIN-FG-PSSIEVLKI--TKH 281 (453)
Q Consensus 206 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~~~~i~-~g-~~~P~~~~p--~~~ 281 (453)
++++. |+. |+ .-|.|+.++++++|+++++.++..+..++. .+ ...|++..| +|
T Consensus 175 ~vl~~--------------------~~~-~g-~~~~~aiLigiv~g~i~a~~lg~~~~~~v~~~~~~~lP~~~~~g~~f- 231 (415)
T TIGR00801 175 IILLN--------------------RFG-KG-FLKSISILIGILVGYILALFMGIVDFSPVIDAPWFSLPTPFTFGPSF- 231 (415)
T ss_pred HHHHH--------------------HHH-hh-HHHHHHHHHHHHHHHHHHHHcCCccchhhccCcccccCCccCCCcee-
Confidence 65322 111 12 224579999999999998877642222211 10 234444333 22
Q ss_pred hhHHhHHhhhcchhHHHHHHHHHHHHH---HHhh-hCC-CCCCCCChhHHHHhHHHHHhhhcCccccccccccccccccC
Q 037301 282 AWKEGFIKGTIPQLPLSVLNSVIAVCK---LSAD-LFP-GKHFSATSVSVTVGLMNLVGCWFGAMPCCHGAGGLAGQYKF 356 (453)
Q Consensus 282 ~~~~~~~~l~lp~l~ltll~svia~~~---la~~-~~~-~~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~~~sa~n~~~ 356 (453)
|+ ..+. +.+++++.+.+.++.. .++. ..+ +++.+.||++.++|++|+++++||++|++....+...+...
T Consensus 232 ~~--~~~~---~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~aglfG~~p~t~~sen~g~~~~T 306 (415)
T TIGR00801 232 EW--PAIL---TMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLAGLFGGFPNTTFAQNIGVIALT 306 (415)
T ss_pred cH--HHHH---HHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHHHhcCCCCCcchhhhheeeeec
Confidence 22 1111 2233344333322221 2211 111 11455789999999999999999999999877778888889
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHH-------HHHHHHHHhhcccccchhHHHHHHHHHHHH
Q 037301 357 GGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLL-------FAGIELAMASRDMNSKEEFFVMLVCTSVSL 429 (453)
Q Consensus 357 GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi-------~~g~~L~~~~~~~~~~~~~~v~~~t~~~~~ 429 (453)
|.+||.+.+++|+++++++++ |.+.++++.+|.+++|++++ ..|.++.... +.++++..++.-+....++
T Consensus 307 ~~~sr~~~~~~a~~~i~~~l~--pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi~~l~~~-~~~~~r~~~i~~~s~~~g~ 383 (415)
T TIGR00801 307 RVASRWVIVGAAVILIALGFF--PKIAALITSIPSPVLGGASIVMFGMIAASGIRILIRN-KLDNRRNRNIIAASVGLGL 383 (415)
T ss_pred CCCchHHHHHHHHHHHHHHHH--HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhC-ccCcccceehHHHHHHHHH
Confidence 999999999999999997777 33445999999999998866 3333333322 2222333333333222222
Q ss_pred HH------hH----HHHHHHHHHHHHHHHHh
Q 037301 430 VG------SS----AALGFVCGIVVHVLLKI 450 (453)
Q Consensus 430 ~~------~~----l~~Gi~~Gi~v~~~l~~ 450 (453)
.. ++ ...|+.+|.++..++.+
T Consensus 384 ~~~~~p~~~~~~p~~~~g~~~g~~~ai~Ln~ 414 (415)
T TIGR00801 384 GVTGVPDIFGNFPLLLSGIALAGIVAILLNL 414 (415)
T ss_pred HHhccHHHHhhCchhcccHHHHHHHHHHHhc
Confidence 21 11 34788888888777653
No 12
>PRK10720 uracil transporter; Provisional
Probab=99.87 E-value=2.6e-19 Score=187.79 Aligned_cols=344 Identities=16% Similarity=0.189 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHh--CCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Q 037301 60 TYIPIVLALTLAKDLDLGTTLIFTGIYNIVTGAIY--GVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLG 137 (453)
Q Consensus 60 t~lPl~la~a~~aGlp~~~~l~~~gl~~iv~gl~~--~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllG 137 (453)
...|+.+ |+|++..++.+|+++++=.+.. |.|+..+|.-+..+..+... ..+|+++.++.+++|+++++++
T Consensus 32 i~~Pli~------gl~~~~~l~~sGi~TliQ~~~~g~rlP~~~G~sfa~i~~~~~~~-~~~~~~~lgav~v~Glv~ills 104 (428)
T PRK10720 32 VLVPILF------HINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLL-PLGYEVALGGFIMCGVLFCLVA 104 (428)
T ss_pred HHHHhhc------CCCHHHHHHHHHHHHHHHHHhccCccceEEeCcHHHHHHHHHHH-HccHHHHHHHHHHHHHHHHHHH
Confidence 5678754 8999999999999999876544 67887777433332222221 2489999999999999999999
Q ss_pred HH--hH-HHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchhHHHHHHHHHHHHHHHhccCc
Q 037301 138 VT--GL-MHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLDGLVLAIVCACFIIIVNGAGE 214 (453)
Q Consensus 138 l~--rl-~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~~~~l~~~~l~~li~l~~~~~ 214 (453)
++ |+ ++++.|++|+.|+-.+++.||+.++-..+++. |..... . +..+ ...+++++++++++++..
T Consensus 105 ~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~-g~~~~~--~--~~~~---~~~~~lalv~l~iil~~~---- 172 (428)
T PRK10720 105 LIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMA-GLLPAE--G--QTPD---SKTIIISMVTLAVTVLGS---- 172 (428)
T ss_pred HHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhc-cccCCC--C--cccc---hHHHHHHHHHHHHHHHHH----
Confidence 98 32 67899999999999999999999886666532 211000 0 1112 235677888777666432
Q ss_pred chhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCcccccc-c-CCCcccccccChhhhHHhHHhhhc
Q 037301 215 ESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNVVKDIN-F-GPSSIEVLKITKHAWKEGFIKGTI 292 (453)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~~~~i~-~-g~~~P~~~~p~~~~~~~~~~~l~l 292 (453)
+.. +|+.|++| .++.+++++++++.++..+...+. . ..+.|++..|+|+ + ......
T Consensus 173 ----------------~~~-kg~~~~~~-iLigIvvG~ila~~lG~~d~~~v~~a~~~~lP~~~~P~fd-~-~~il~l-- 230 (428)
T PRK10720 173 ----------------VLF-RGFLAIIP-ILIGVLVGYALSFAMGMVDTTPIIEAHWFALPTFYTPRFE-W-FAILTI-- 230 (428)
T ss_pred ----------------HHh-ccHHHHhH-HHHHHHHHHHHHHHhcCCCHHHhhcCccccCCCCCCCcCc-H-HHHHHH--
Confidence 111 34556665 699999999998887643222221 1 1345666666653 2 122221
Q ss_pred chhHHHHHHHHHHHHHH--HhhhCC---CCCCCCChhHHHHhHHHHHhhhcCccccccccccccccccCCCcchHHHHH-
Q 037301 293 PQLPLSVLNSVIAVCKL--SADLFP---GKHFSATSVSVTVGLMNLVGCWFGAMPCCHGAGGLAGQYKFGGRSGGCVAL- 366 (453)
Q Consensus 293 p~l~ltll~svia~~~l--a~~~~~---~~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~~~sa~n~~~GaRT~la~v~- 366 (453)
++.++...+.++..+ ..+... .++.+.||++.++|++|+++++||++|++. .+-|...+++|+.++-.
T Consensus 231 --~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~~p~tt----y~en~g~ia~T~v~sr~v 304 (428)
T PRK10720 231 --LPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTT----YGENIGVMAITRVYSTWV 304 (428)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCCCCccc----cccccceeeecccchhHH
Confidence 222222222222111 112221 124578999999999999999999999875 33344567777776665
Q ss_pred ---HHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHHHHHhh-------cccc--cchhHHHHHHH----------
Q 037301 367 ---LGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIELAMAS-------RDMN--SKEEFFVMLVC---------- 424 (453)
Q Consensus 367 ---~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~L~~~~-------~~~~--~~~~~~v~~~t---------- 424 (453)
.|+++++++++ |.+..++..+|.+++|++.+ +.+.++... ++.+ +++..++.-+.
T Consensus 305 ~~~a~~~li~lg~~--pk~~a~ia~iP~pVlgg~~i-~~fg~i~~~Gi~~l~~~~~~~~~~~n~~i~~~~l~~g~~~~~~ 381 (428)
T PRK10720 305 IGGAAIIAILLSCV--GKLAAAIQAIPLPVMGGVSL-LLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKV 381 (428)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHHHHccCCCCcccchhHHHHHHHHHHHHHHH
Confidence 55566554443 56777999999999998865 333333221 1111 23222211111
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhhcC
Q 037301 425 TSVSLVGSSAALGFVCGIVVHVLLKIRKF 453 (453)
Q Consensus 425 ~~~~~~~~~l~~Gi~~Gi~v~~~l~~~~~ 453 (453)
.+..++..++..|.++|++++.++..||+
T Consensus 382 ~~~~~~~~gi~~g~~~ai~Lnlll~~~~~ 410 (428)
T PRK10720 382 NIGAAELKGMALATIVGIGLSLIFKLISK 410 (428)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHhccccc
Confidence 12223235889999999999999986653
No 13
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=99.80 E-value=1.8e-17 Score=172.11 Aligned_cols=327 Identities=20% Similarity=0.254 Sum_probs=179.2
Q ss_pred hhhHHHHHHHHHHHHHHHhCCccccch---hHHHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhh
Q 037301 76 LGTTLIFTGIYNIVTGAIYGVPMPVQP---MKSIAAVAISNG----SDFGIPEIMAAGICTGGILFVLGVTGLMHLAYKL 148 (453)
Q Consensus 76 ~~~~l~~~gl~~iv~gl~~~~Pl~v~p---~~a~aa~~i~~~----~~~~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~ 148 (453)
..+.++.+|+++++.+++.|.|+++.+ .+.+.+..+..+ .+.+++++.++.+++|++++++++++.++|+.|+
T Consensus 39 i~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~ 118 (389)
T PF00860_consen 39 ISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISGILFILLGLTGLRKRLRRL 118 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHH
Confidence 356777899999999999998877754 344444444432 2467899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchhHHHHHHHHHHHHHHHhccCcchhhhhhccccccc
Q 037301 149 IPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLDGLVLAIVCACFIIIVNGAGEESAEREANDHEEER 228 (453)
Q Consensus 149 IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~~~~l~~~~l~~li~l~~~~~~~~~~~~~~~~~~~ 228 (453)
+|+.|+.+++.++|+.+....+++..+.....+....++ .....++...+++.+...
T Consensus 119 ~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~------------------ 175 (389)
T PF00860_consen 119 FPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNPDGLLVGD-----GKNLGLAVLTLLFILLLS------------------ 175 (389)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHTTSS---BTT-B--------HHHHHHHHHHHHHHHHHH------------------
T ss_pred hChhheEeeEeeehhhhhhhHhhcccccccccccccccc-----ccccccccccchhhhhhh------------------
Confidence 999999999999999999999998765431100000011 112333333333333222
Q ss_pred hhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCcccc-cccC--CCcc---cccccChhhhHHhHHhhhcchhHHHHHH-
Q 037301 229 PKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNVVKD-INFG--PSSI---EVLKITKHAWKEGFIKGTIPQLPLSVLN- 301 (453)
Q Consensus 229 ~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~~~~-i~~g--~~~P---~~~~p~~~~~~~~~~~l~lp~l~ltll~- 301 (453)
..+ +++.++. +.++.+++++++++..+..+.++ +... ...| ++..|.|+ ...+...++.......+
T Consensus 176 --~~~-~~~~~~~-ailigi~~g~i~~~~~g~~~~~~~~~~~~~~~~p~~~~~g~p~f~---~~~i~~~~~~~lv~~~es 248 (389)
T PF00860_consen 176 --LFL-KGFLRKG-AILIGIIAGWIVAAILGVVDFSPSVSSAPWFSLPSPFPFGWPSFD---PGAILTFLIFALVAMFES 248 (389)
T ss_dssp --HSS-STTTTTH-HHHHHHHHHHHHHHHHHHTTSSH-HHHS-SS-----------------HHHHHHHTHHHHHHHHHH
T ss_pred --hhh-hhhcccc-cchhhhhhhhhhhhcccccccCccccccccccccccccccccccc---HHHHHHHHHHHHHHhhhh
Confidence 001 1233444 67788888888877655211122 2110 1222 22333321 11121111111112222
Q ss_pred --HHHHHHHHHhhhCCCCCCCCChhHHHHhHHHHHhhhcCccccccccccccccccCCCcchHHHHHHHHHHHHHHHHhh
Q 037301 302 --SVIAVCKLSADLFPGKHFSATSVSVTVGLMNLVGCWFGAMPCCHGAGGLAGQYKFGGRSGGCVALLGAVKMVLGLVLG 379 (453)
Q Consensus 302 --svia~~~la~~~~~~~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~~~sa~n~~~GaRT~la~v~~G~~~ll~~L~~~ 379 (453)
+..+.+... +..++++.+.||-..+.|++|+++++||++|.+........-...|-++|.+....+++.++++++
T Consensus 249 ~G~~~a~~~~~-~~~~~~~~~~~r~l~~dg~~~~l~gl~G~~~~t~~~en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~-- 325 (389)
T PF00860_consen 249 IGTIVAVARIA-GKDDPRPPRIRRGLLADGLGTILAGLFGTSPTTTYSENAGGIAATGVASRRVGLTAGVILILFGLS-- 325 (389)
T ss_dssp HHHHHHHHHHH-TS-TCCCCCHHHHHHHHHHHHHHHHHHT---EEE-HHHHHHHHHHTB--HHHHHHHHHHHHHHT----
T ss_pred hhhHHHHHHHh-CCCCccchhhcccceeeeeeeeechhhcCCCCccccccchhhhhhccccceeeeHHHHHHHHHhhH--
Confidence 222222222 222233677899999999999999999999987433222222235677778888888877775543
Q ss_pred hhHHHHHhhccHHHH-HHHHHHHHHHHHHhhcccc--cchhHHHHHHHHHHHHHHhHHH
Q 037301 380 SSLVMVLDQFPVGVL-GVLLLFAGIELAMASRDMN--SKEEFFVMLVCTSVSLVGSSAA 435 (453)
Q Consensus 380 p~~~~ll~~iP~a~L-aalLi~~g~~L~~~~~~~~--~~~~~~v~~~t~~~~~~~~~l~ 435 (453)
|.+.+++..||.+++ |+.+++.|.-+....+.++ +.+|.-..+++.++....+++.
T Consensus 326 p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~~~~r~~~iv~~~l~~g~~i~ 384 (389)
T PF00860_consen 326 PKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRNIDWVDLDSARNAFIVGLSLPLGLSIA 384 (389)
T ss_dssp HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHhHhheecccCccccHHHHHHhHHHHHHHh
Confidence 566679999999997 4556678887777665442 3334555555555544434433
No 14
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=99.79 E-value=1.2e-15 Score=160.23 Aligned_cols=287 Identities=17% Similarity=0.225 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHH--hCCccccchhHHHHHHHHHc------CCCCCHHHHHHHHHHHHH
Q 037301 60 TYIPIVLALTLAKDLDLGTTLIFTGIYNIVTGAI--YGVPMPVQPMKSIAAVAISN------GSDFGIPEIMAAGICTGG 131 (453)
Q Consensus 60 t~lPl~la~a~~aGlp~~~~l~~~gl~~iv~gl~--~~~Pl~v~p~~a~aa~~i~~------~~~~~~~~~~~A~ll~G~ 131 (453)
+..|+.+ |+|++..++++|+++++.+.. .|.|+..++..+.....++. +.+...+++.++.+++|+
T Consensus 48 v~~Plil------gl~~~~tl~~sGi~TllQ~~~~G~rlP~v~G~sf~f~~~~~~~~~~~~~~~~~~~~~a~ga~iv~G~ 121 (429)
T TIGR03616 48 VLMPLLM------GFDPNLTILMSGIGTLLFFLITGGRVPSYLGSSAAFVGAVIAATGYNGQGTNPNIALALGGIIACGL 121 (429)
T ss_pred HHHHHHh------CCCHhHHHHHHHHHHHHHHHHhCCCceeEEcCcHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHH
Confidence 4455554 799999999999999999876 56788776643333222211 111246888999999999
Q ss_pred HHHHHHHHhHH---HHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchhHHHHHHHHHHHHHH
Q 037301 132 ILFVLGVTGLM---HLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLDGLVLAIVCACFIII 208 (453)
Q Consensus 132 i~lllGl~rl~---~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~~~~l~~~~l~~li~ 208 (453)
+++++|+++.+ +++.|++|+-|.--+...||+.++-..++...+. +..+|. .++.++++.+..
T Consensus 122 i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~~~~~---------~~~~~~----al~tl~~i~l~~- 187 (429)
T TIGR03616 122 VYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSAS---------GFDSWM----AVLTILCIGAVA- 187 (429)
T ss_pred HHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhcccc---------ccccHH----HHHHHHHHHHHH-
Confidence 99999999865 8899999999999999999999888777754211 011221 112222222221
Q ss_pred HhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHh----cC---Cccccccc--CCCcccccccC
Q 037301 209 VNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVR----RP---NVVKDINF--GPSSIEVLKIT 279 (453)
Q Consensus 209 l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~----~~---~~~~~i~~--g~~~P~~~~p~ 279 (453)
.+ . +++.|+. +.++.+++|.++++.. +. .+...+.. .+..|++..|.
T Consensus 188 l~----------------------~-~~~l~~~-avLiGivvG~iva~~l~~~~g~~~~vd~s~v~~a~~~~lP~~~~p~ 243 (429)
T TIGR03616 188 VF----------------------T-RGMLQRL-LILVGLIAAYLAYFILTNVFGLGKAVDFSPISQAAWFGLPNFHTPV 243 (429)
T ss_pred HH----------------------H-HHHHHHH-HHHHHHHHHHHHHHHHhhhcCCCccccCcccccCccccCCcCCCce
Confidence 12 1 2344555 8888888888876643 21 11112210 13567776665
Q ss_pred hhhhHHhHHhhhcchhHHHHHHHHHHHHHHHhhhCCCCCC--CCChhHHHHhHHHHHhhhcCccccccccccccccccCC
Q 037301 280 KHAWKEGFIKGTIPQLPLSVLNSVIAVCKLSADLFPGKHF--SATSVSVTVGLMNLVGCWFGAMPCCHGAGGLAGQYKFG 357 (453)
Q Consensus 280 ~~~~~~~~~~l~lp~l~ltll~svia~~~la~~~~~~~~~--~~~~el~a~GlaNl~~~~fGg~p~~~s~~~sa~n~~~G 357 (453)
|+ + ..... .++....++.+++-...+.. +.. +++. +.||++.++|++|+++++||+.|.+.. +-|...+
T Consensus 244 f~-~-~~il~-~~~~~lv~~~esiG~~~a~~-~~~-~~~~~~~i~r~l~adGl~t~~agl~g~~p~tt~----~en~g~i 314 (429)
T TIGR03616 244 FN-A-NAMLL-IAPVALILVAENLGHFKAVA-GMT-GRNLDPYMGRAFVGDGLATMLSGSVGGTGVTTY----AENIGVM 314 (429)
T ss_pred Ec-H-HHHHH-HHHHHHHHHHHhhHHHHHHH-HHh-CCCCCchhccchhhhhHHHHHHHhcCCCCCcce----eeeeeee
Confidence 53 2 12221 11111122223221111121 122 2223 358999999999999999999987643 3344567
Q ss_pred CcchHH--HHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHH
Q 037301 358 GRSGGC--VALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLL 399 (453)
Q Consensus 358 aRT~la--~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi 399 (453)
++|+.+ .++.....+++.+.+.|.+..++..||.+++|++++
T Consensus 315 ~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i 358 (429)
T TIGR03616 315 AVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASI 358 (429)
T ss_pred eecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 777766 333333333334555688888999999999998754
No 15
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=99.61 E-value=4e-13 Score=139.92 Aligned_cols=309 Identities=21% Similarity=0.289 Sum_probs=198.4
Q ss_pred HHHHHHHHHHHHcCCChh-------hHHHHHHHHHHHHHHH---h--CCccccchhHHHHHHHHHcCCCC--CHHHHHHH
Q 037301 60 TYIPIVLALTLAKDLDLG-------TTLIFTGIYNIVTGAI---Y--GVPMPVQPMKSIAAVAISNGSDF--GIPEIMAA 125 (453)
Q Consensus 60 t~lPl~la~a~~aGlp~~-------~~l~~~gl~~iv~gl~---~--~~Pl~v~p~~a~aa~~i~~~~~~--~~~~~~~A 125 (453)
+.+|+.++ ..-|++.+ +.++++|+++++-.+. . +.|.-.++.-+..+-.++.+..+ +.+.+.++
T Consensus 34 V~VPlivg--~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ 111 (451)
T COG2233 34 VLVPLLVG--LALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGG 111 (451)
T ss_pred hHhhHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHH
Confidence 56776654 34466633 5577899999986653 3 34544454434333333332233 48889999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchhHHHHHHHHHHH
Q 037301 126 GICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLDGLVLAIVCACF 205 (453)
Q Consensus 126 ~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~~~~l~~~~l~~ 205 (453)
.+.+|++.++++..--. |+.|++|+-|.--+..=||+.++-..++++.|.+........++ ...+.++.++++.
T Consensus 112 ii~ag~~~~li~~~~~~-~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~~~~~~~~~-----~~~l~la~~tl~~ 185 (451)
T COG2233 112 IIAAGLVYFLISPIVKI-RLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAAGNPDFGS-----LENLGLALVTLLI 185 (451)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCCCCCcccCc-----hhHHHHHHHHHHH
Confidence 99999999999988743 99999999999888999999999889988877542211111122 2356677777776
Q ss_pred HHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCc---ccccccCCCccccccc--Ch
Q 037301 206 IIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNV---VKDINFGPSSIEVLKI--TK 280 (453)
Q Consensus 206 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~---~~~i~~g~~~P~~~~p--~~ 280 (453)
+++.. |.. +.+.|++ +.++.+++|.++++..+.-+ +.+-++ ..+|++..+ .|
T Consensus 186 il~~~--------------------~f~-~g~~~~i-~ILiGlv~G~~la~~~G~vdf~~v~~a~w-~~~P~~~~fg~~F 242 (451)
T COG2233 186 ILLIN--------------------RFG-KGFLRRI-PILIGLVVGYLLALFMGMVDFSGVAEAPW-FALPTPFYFGMAF 242 (451)
T ss_pred HHHHH--------------------HHh-hhHHHHH-HHHHHHHHHHHHHHHhCCcCccccccCce-eeCCcccCCCeee
Confidence 66444 212 3567777 78888999999888876322 222222 345555443 23
Q ss_pred hhhHHhHHhhhcchhHHHHHHHHHH------HHHHHhhhCCCCCCCCChhHHHHhHHHHHhhhcCcccccccc--ccccc
Q 037301 281 HAWKEGFIKGTIPQLPLSVLNSVIA------VCKLSADLFPGKHFSATSVSVTVGLMNLVGCWFGAMPCCHGA--GGLAG 352 (453)
Q Consensus 281 ~~~~~~~~~l~lp~l~ltll~svia------~~~la~~~~~~~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~--~~sa~ 352 (453)
+ | .+. ++.++.++.+.+.. ++.+..+.+. ++.+.+|-..+.|++++++++||++|.+.-+ .|.-
T Consensus 243 ~-~-~ai----l~m~~v~iV~~~E~~G~i~A~~~itg~~~~-~~~~l~rg~~aDGlat~iag~fg~~p~TtfaqNiGvv- 314 (451)
T COG2233 243 D-W-GAI----LTMLPVAIVTIVEHTGDITATGEITGRDLD-GKPRLRRGLLADGLATLIAGLFGGFPNTTFAQNIGVV- 314 (451)
T ss_pred c-H-HHH----HHHHHHHHHHHHHHhhhhhhHHhHhCCcCc-cCcccccceeeccHHHHHHHhcCCCCCCchhhceeee-
Confidence 2 2 222 22233344333322 2333333331 2467788899999999999999999986322 2221
Q ss_pred cccCCCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHH-------HHHHHHHHHHhhc
Q 037301 353 QYKFGGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVL-------LLFAGIELAMASR 410 (453)
Q Consensus 353 n~~~GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~Laal-------Li~~g~~L~~~~~ 410 (453)
.-.|-+||......|++.++++++ |.+..+++.||.+++|++ +...|+++....+
T Consensus 315 -~lT~v~Sr~V~~~aavili~lgl~--pk~~al~~sIP~pVlGGa~ivmFG~Ia~sGir~l~~~~ 376 (451)
T COG2233 315 -ALTGVYSRYVIAGAAVILILLGLF--PKFGALIQSIPSPVLGGAMLVLFGMIAASGIRILIRNK 376 (451)
T ss_pred -eeccCChhHHHHHHHHHHHHHHhh--HHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 136889999999999999988876 678889999999999875 2334555555433
No 16
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=99.59 E-value=1e-11 Score=130.33 Aligned_cols=300 Identities=13% Similarity=0.093 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHcCCChh-------hHHHHHHHHHHHHHHH-hCCccccchhHHHH--HHHHH--c-CCCCCHHHHHH--
Q 037301 60 TYIPIVLALTLAKDLDLG-------TTLIFTGIYNIVTGAI-YGVPMPVQPMKSIA--AVAIS--N-GSDFGIPEIMA-- 124 (453)
Q Consensus 60 t~lPl~la~a~~aGlp~~-------~~l~~~gl~~iv~gl~-~~~Pl~v~p~~a~a--a~~i~--~-~~~~~~~~~~~-- 124 (453)
...|+.+ +.+.|+|++ +.++.+|+.+++=+.+ .|.|+..+|.-+.. ..+++ . ..+.++++..+
T Consensus 26 i~vPliv--a~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~~~~~~i~~~~~~~g~~~~~~~g~l 103 (433)
T PRK11412 26 VVVPPTL--LSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSL 103 (433)
T ss_pred HHHHHHH--HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHHHHHHHHHhcccccCccHHHHHHHH
Confidence 4456554 556889875 5566788888887653 33677666643322 22222 1 11334556655
Q ss_pred --HHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchhHHHHHHHH
Q 037301 125 --AGICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLDGLVLAIVC 202 (453)
Q Consensus 125 --A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~~~~l~~~~ 202 (453)
+.+++|++++++|.+++.+|+.|++|+-|.-=++.=||+.+.-..++++.|.+... ....++.. .....+++.+
T Consensus 104 ~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~-~~~~~~~~---~~~~~~a~~~ 179 (433)
T PRK11412 104 AVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGI-ADPNGKIQ---LPPFGLSVAV 179 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccC-cccccccc---hHHHHHHHHH
Confidence 47999999999999999999999999999999999999999988888887642100 00112211 1234455555
Q ss_pred HHHHHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHH-HhcCCc--ccccccCCCcccccccC
Q 037301 203 ACFIIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAF-VRRPNV--VKDINFGPSSIEVLKIT 279 (453)
Q Consensus 203 l~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~-~~~~~~--~~~i~~g~~~P~~~~p~ 279 (453)
+++++.+. +.. +++.|.+ +.++.+++|.+++. ..+.+. +.+.++ ..+| +..|+
T Consensus 180 l~~il~~~--------------------~~~-~g~~~~~-svLiGiv~G~v~a~~~~g~d~~~v~~a~w-~~~p-fG~P~ 235 (433)
T PRK11412 180 MCLVLAMI--------------------IFL-PQRIARY-SLLVGTIVGWILWAFCFPSSHSLSGELHW-QWFP-LGSGG 235 (433)
T ss_pred HHHHHHHH--------------------HHh-hhHHHHH-HHHHHHHHHHHHHHHHhCCCcchhccCCc-eeec-CCCCC
Confidence 55444333 111 2455555 78888888888754 333211 112222 1222 44553
Q ss_pred -hhhhHHhHHhhhcchhHHHHHHHHH------HHHHHHhhhCCCCCCCCChhHHHHhHHHHHhhhcCccccccccccccc
Q 037301 280 -KHAWKEGFIKGTIPQLPLSVLNSVI------AVCKLSADLFPGKHFSATSVSVTVGLMNLVGCWFGAMPCCHGAGGLAG 352 (453)
Q Consensus 280 -~~~~~~~~~~l~lp~l~ltll~svi------a~~~la~~~~~~~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~~~sa~ 352 (453)
|+ + ..++ +..+..+.+.+. +.+....+..+ ++.+.+|-..+.|++|+++++||++|.+.-......
T Consensus 236 ~F~-~-~~il----~~~~~~lv~~~e~iG~~~a~~~~~~~~~~-~~~~l~rgi~~dGi~s~laglfg~~p~tt~sqNvGv 308 (433)
T PRK11412 236 ALE-P-GIIL----TAVITGLVNISNTYGAIRGTDVFYPQQGA-GNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGL 308 (433)
T ss_pred ccC-H-HHHH----HHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CCcccccchhhccHHHHHHHhcCCCCCCchhhhhhh
Confidence 53 2 1222 222233332222 22222211111 134678899999999999999999998643222212
Q ss_pred cccCCCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHH
Q 037301 353 QYKFGGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLL 398 (453)
Q Consensus 353 n~~~GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalL 398 (453)
-.-.|-++|......|+++++++++ |.+..++..||.+++|++.
T Consensus 309 i~~TgV~SR~v~~~aa~ilillgl~--PK~~alia~IP~pVlGg~~ 352 (433)
T PRK11412 309 LTQTGDYRRRSFIYGSVMCLLVALI--PALTRLFCSIPLPVSSAVM 352 (433)
T ss_pred hhhcCCchhHHHHHHHHHHHHHHHH--HHHHHHHHhCCHHHHHHHH
Confidence 2236889999999999999998886 7888999999999998874
No 17
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=98.40 E-value=0.00091 Score=75.88 Aligned_cols=311 Identities=14% Similarity=0.125 Sum_probs=168.5
Q ss_pred CChhhHHHHHHHHHHHHHHHhCCcccc----chhHHHH--HHHHHcCCCCCHHHHH-HHHHHHHHHHHHHHHHhHHHHHH
Q 037301 74 LDLGTTLIFTGIYNIVTGAIYGVPMPV----QPMKSIA--AVAISNGSDFGIPEIM-AAGICTGGILFVLGVTGLMHLAY 146 (453)
Q Consensus 74 lp~~~~l~~~gl~~iv~gl~~~~Pl~v----~p~~a~a--a~~i~~~~~~~~~~~~-~A~ll~G~i~lllGl~rl~~~l~ 146 (453)
+...=.++.+++.+++.+++.|.|+.+ +|..++- -+-++...++++-... -.++|+.++.+++..+.. .+++
T Consensus 401 ~gv~E~Llstai~Giifslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~~~yl~~~~WigiW~~~~~~lla~~~~-s~lv 479 (900)
T TIGR00834 401 MGVSELLISTAVQGVLFALLAAQPLLVVGFSGPLLVFEEAFFSFCESNGLEYLVGRVWIGLWLVLLVLLLVATEG-SFLV 479 (900)
T ss_pred chHHHHHHHHHHHHHHHhhhcCCceEEecCcccHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhH-HHHH
Confidence 334455778899999999999999744 5654433 2334443344443333 357999999999999997 8999
Q ss_pred hhCCHHHHHHHHHHHHHHHHHHhhhhhhhcc---cc-ccc-------c-----cc----------------CC-CCcc--
Q 037301 147 KLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQ---DF-AKS-------K-----VK----------------GN-RHWL-- 191 (453)
Q Consensus 147 ~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~---~~-~~~-------~-----~l----------------~~-~~~~-- 191 (453)
+++.+.-=--|-.=|.++++...++.+...- +. ... . .. +. -.+.
T Consensus 480 ryiTRFTeEiFa~lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 559 (900)
T TIGR00834 480 RYISRFTQEIFSFLISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPN 559 (900)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccccccccccccccccccccccch
Confidence 9999999888888888999999988765321 00 000 0 00 00 0000
Q ss_pred -chhHHHHHHHHHHHHHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhcCCccccccc--
Q 037301 192 -GLDGLVLAIVCACFIIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRRPNVVKDINF-- 268 (453)
Q Consensus 192 -~~~~~~l~~~~l~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~~~~~~~i~~-- 268 (453)
...++++.+.++.+...+. +++.+.=. +++. |++..-+ +..+++++.+.+.+.......+..+.
T Consensus 560 ~~llsliL~lgTf~~a~~L~-------~fk~s~yf----~~~v-R~~isDf-gv~iaI~~~t~v~~~~~~v~~~kl~Vp~ 626 (900)
T TIGR00834 560 TALLSLVLMLGTFFLAMFLR-------KFKNSRYF----PGKA-RRLIGDF-GVPISILIMVLVDIFIGDTYTQKLSVPS 626 (900)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------HhCCCCcC----Cchh-hhhhhhh-hHHHHHHHHHHHHHHhccCcccccCCCC
Confidence 0112333333322222111 11111000 0001 1222222 44555666566665443211222211
Q ss_pred --CCCcc---cccccCh------hhhHHhHHhhhcchhHHHHHHHHH-HHHHHHhhhCCC--CCCC-CChhHHHHhHHHH
Q 037301 269 --GPSSI---EVLKITK------HAWKEGFIKGTIPQLPLSVLNSVI-AVCKLSADLFPG--KHFS-ATSVSVTVGLMNL 333 (453)
Q Consensus 269 --g~~~P---~~~~p~~------~~~~~~~~~l~lp~l~ltll~svi-a~~~la~~~~~~--~~~~-~~~el~a~GlaNl 333 (453)
.++.| .|..+.| ..| ..+...+|.+.++++.-+- -++++..+.-.+ ++.+ -+-++.-+|+.|.
T Consensus 627 ~f~pt~p~~R~W~i~p~~~~~~~p~w--~~~~A~iPAlll~ILiFmD~nIts~iv~~~e~kLkKgsgyH~Dllllg~~~~ 704 (900)
T TIGR00834 627 GLKVTNPSARGWFIPPLGENRPFPWW--MMFAAALPALLVFILIFMEQQITTLIVSKKERKLKKGSGFHLDLLLVVGMGG 704 (900)
T ss_pred CcCCCCCCCCCeEEccccccccccHH--HHHHHHHHHHHHHHHHHHHhhhHHHHhcCccccCCCCcccchHHHHHHHHHH
Confidence 12222 1111111 111 1222334444444331110 022222222111 2333 4568889999999
Q ss_pred HhhhcCccccccccccccccccC----------CC--------cchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHH
Q 037301 334 VGCWFGAMPCCHGAGGLAGQYKF----------GG--------RSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLG 395 (453)
Q Consensus 334 ~~~~fGg~p~~~s~~~sa~n~~~----------Ga--------RT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~La 395 (453)
++++||=-+.|++..+|-.|.++ |. -+|+++++.++++.+ .+++.| ++..||+++|.
T Consensus 705 v~sllGLPw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~lLigl-sv~~~P----vL~~IP~aVL~ 779 (900)
T TIGR00834 705 VAALFGLPWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAVLVGL-SILMEP----ILKRIPLAVLF 779 (900)
T ss_pred HHHhcCCCcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHHHHHH-HHHHHH----HHhhccHHHHH
Confidence 99999987777765444332221 22 378999999987765 455677 99999999999
Q ss_pred HHHHHHHHHH
Q 037301 396 VLLLFAGIEL 405 (453)
Q Consensus 396 alLi~~g~~L 405 (453)
++.++.|+.=
T Consensus 780 GvFlYMGv~S 789 (900)
T TIGR00834 780 GIFLYMGVTS 789 (900)
T ss_pred HHHHHHHHhh
Confidence 9999988753
No 18
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=98.33 E-value=1.6e-06 Score=71.03 Aligned_cols=64 Identities=14% Similarity=0.046 Sum_probs=54.8
Q ss_pred hhhHHHhHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHhCCc-cccchhHHHHHHH
Q 037301 47 KWAEINGAMGDLGTYIPIVLALTLAKDLDLGTTLIFTGIYNIVTGAIYGVP-MPVQPMKSIAAVA 110 (453)
Q Consensus 47 ~~~e~~g~l~~l~t~lPl~la~a~~aGlp~~~~l~~~gl~~iv~gl~~~~P-l~v~p~~a~aa~~ 110 (453)
.++|+.++++...+.+||+++|+..+|+||..|++++.+.+++.+++.+++ +.++|.++.+.+.
T Consensus 16 ~~~D~~aGltva~~~iPq~~a~A~lAg~pp~~GLy~a~~~~liyalfG~s~~~~~Gp~a~~s~l~ 80 (84)
T PF13792_consen 16 LRGDLLAGLTVALVAIPQGMAYALLAGVPPIYGLYAAIIPPLIYALFGSSRHMIVGPTAAMSLLI 80 (84)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeHHHHHHHHHHhhccCCCccccChHHHHHHHH
Confidence 358887789999999999999999999999999999999999989888866 6677876666543
No 19
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=97.97 E-value=0.00085 Score=68.28 Aligned_cols=287 Identities=14% Similarity=0.178 Sum_probs=147.7
Q ss_pred ccchhhhHHHhHHHH----HHHHHHHHHHHHHHcCCChhhH-------HHHHH-HHHHHHHHHhC----CccccchhHHH
Q 037301 43 VFQSKWAEINGAMGD----LGTYIPIVLALTLAKDLDLGTT-------LIFTG-IYNIVTGAIYG----VPMPVQPMKSI 106 (453)
Q Consensus 43 ~~~~~~~e~~g~l~~----l~t~lPl~la~a~~aGlp~~~~-------l~~~g-l~~iv~gl~~~----~Pl~v~p~~a~ 106 (453)
+||.-++|+--++++ .-..=-.+.++|.--|+++.-. ++.++ ++.++.+-+.+ .+-.-+||.+.
T Consensus 54 D~rfE~ED~vPAlAgtIGkivMvsAv~aafA~~lgL~~~Fv~envR~EllI~a~lFvil~Sgfl~P~anLAGthgPmIpL 133 (492)
T PF11840_consen 54 DYRFEWEDLVPALAGTIGKIVMVSAVAAAFAAPLGLSPEFVIENVRYELLIAALLFVILFSGFLNPRANLAGTHGPMIPL 133 (492)
T ss_pred ccccchHHhhHHHHhhhhHHHHHHHHHHHHhhccCCChhHhhhhhhhhhhHHHHHHHHHHHhccCccccccCCCCCcchh
Confidence 456566775433433 2233334555666668886632 22333 36666554433 22233455443
Q ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccC
Q 037301 107 AAVAISNGSDFGIPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKG 186 (453)
Q Consensus 107 aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~ 186 (453)
--..++.+ +++. +-+++.|++=++++.+|...++++.-++-|.-|.+.=.|..=..+|++++..-. ..+
T Consensus 134 Ip~ivaaG-gHPL----algilvg~fGlil~~~kggS~L~~LTs~gv~ggLllylG~~G~~~qi~kl~~wa-----~~~- 202 (492)
T PF11840_consen 134 IPLIVAAG-GHPL----ALGILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYLGFVGLIGQIKKLFAWA-----NGF- 202 (492)
T ss_pred hHHHHHcC-CCcH----HHHHHHHHHHHHHHHhcchhHHHhhhcCccccceeeeehhhhHHHHHHHHHHHH-----hcc-
Confidence 32222222 3442 456889999999999999999999999999888776666666678888764211 111
Q ss_pred CCCccchhHHHHHHHHHHHHHHHhccCcchhhhhhccccccchhhhhhhhhcccch-HHHHHHHHHHHHHHHhcCCcccc
Q 037301 187 NRHWLGLDGLVLAIVCACFIIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLP-SAFIVFLLGVILAFVRRPNVVKD 265 (453)
Q Consensus 187 ~~~~~~~~~~~l~~~~l~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP-~aLi~vv~g~~l~~~~~~~~~~~ 265 (453)
+..+. .-+++....+++.. +. | .++||. .+| ..+++.++..+++.-+....
T Consensus 203 ~~~~i--~fvvi~~tiv~Ya~-L~-------------------k--~~KrWL-aIPl~~~~a~~~a~~lGa~f~f~t--- 254 (492)
T PF11840_consen 203 DMGYI--AFVVIIVTIVLYAY-LA-------------------K--IEKRWL-AIPLCSILAGVLAFALGAPFEFTT--- 254 (492)
T ss_pred CccHH--HHHHHHHHHHHHHH-HH-------------------H--hccchh-hhhHHHHHHHHHHHHcCCCceeec---
Confidence 22222 11222222222222 22 1 112443 344 23444444444333222111
Q ss_pred cccCCCcccc--------------cccChhhhHHhHHhhhcchhHHHHHHHH------HHHHHHHhhhCCCC----CCCC
Q 037301 266 INFGPSSIEV--------------LKITKHAWKEGFIKGTIPQLPLSVLNSV------IAVCKLSADLFPGK----HFSA 321 (453)
Q Consensus 266 i~~g~~~P~~--------------~~p~~~~~~~~~~~l~lp~l~ltll~sv------ia~~~la~~~~~~~----~~~~ 321 (453)
.+.+|.+ ..|+++.|. .. +|++++.-. ++-...-.-++|++ ..|.
T Consensus 255 ---~pglp~lnP~YWWge~tGw~LglP~~~hfi-----av---~PFAiLAVaMWSpDflghrvFqelnypk~~~kvlMnv 323 (492)
T PF11840_consen 255 ---EPGLPNLNPMYWWGEETGWQLGLPTLEHFI-----AV---LPFAILAVAMWSPDFLGHRVFQELNYPKETKKVLMNV 323 (492)
T ss_pred ---CCCCCCCCCcccccCCcccccCCCcHHHHH-----Hh---ccHHHHHHHHhCchHHHHHHHHHhcCchhhcceeecc
Confidence 1223332 223333222 12 233332100 01111112256553 4789
Q ss_pred ChhHHHHhHHHHHhhhcCccccccccccccccccCCCcch--HHHHHHHHHHHHHHHHhhh
Q 037301 322 TSVSVTVGLMNLVGCWFGAMPCCHGAGGLAGQYKFGGRSG--GCVALLGAVKMVLGLVLGS 380 (453)
Q Consensus 322 ~~el~a~GlaNl~~~~fGg~p~~~s~~~sa~n~~~GaRT~--la~v~~G~~~ll~~L~~~p 380 (453)
|+..+...+=|++++.+||-..+.|=+.=. --.+=||++ ..++.+|+++++.++.--|
T Consensus 324 DDTm~~~siRQ~vGs~lGGgN~~SsWgTym-IPaaIaKRPIpggAiLtg~~Ci~~av~GyP 383 (492)
T PF11840_consen 324 DDTMTMCSIRQIVGSILGGGNIASSWGTYM-IPAAIAKRPIPGGAILTGLLCIVAAVWGYP 383 (492)
T ss_pred cchhHHHHHHHHHhhcccCCcccccchhhh-hhHHHhcCCCCchHHHHHHHHHHHHHhcCc
Confidence 999999999999999999987765432111 011234443 3679999999987776444
No 20
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=97.88 E-value=0.0043 Score=65.36 Aligned_cols=298 Identities=18% Similarity=0.214 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHcCCChh------hHHHHHHHHHHHHHHH-hCCccccchhHHHHH--HHHHcC--C-----CC------
Q 037301 60 TYIPIVLALTLAKDLDLG------TTLIFTGIYNIVTGAI-YGVPMPVQPMKSIAA--VAISNG--S-----DF------ 117 (453)
Q Consensus 60 t~lPl~la~a~~aGlp~~------~~l~~~gl~~iv~gl~-~~~Pl~v~p~~a~aa--~~i~~~--~-----~~------ 117 (453)
+++|..+.=+.-.|=+.. +.++.+|+.+++=..+ .|.|+..+|.-+... .++... . ..
T Consensus 30 v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~Sfafl~p~~~i~~~~~~~~~~~~~~~~~~~ 109 (510)
T KOG1292|consen 30 VLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPSFAFLPPALAIISLPRFTCITTPHETDTER 109 (510)
T ss_pred hhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccceehhhHHHHHHhccccCCCCCcccchhHH
Confidence 667877764333333322 4556778877776544 346887777433332 222211 0 11
Q ss_pred ---CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccCCCCccchh
Q 037301 118 ---GIPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIRNVQDFAKSKVKGNRHWLGLD 194 (453)
Q Consensus 118 ---~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~g~~~~~~~~~l~~~~~~~~~ 194 (453)
..+++.+|.++++.++.++|++++-+.+.|||.+=.+.=..+=+|+-+.-...+.+ ..+|-
T Consensus 110 ~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l~~~~~~~~-------------~~~we--- 173 (510)
T KOG1292|consen 110 FQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGLFQDGFPKL-------------GKHWE--- 173 (510)
T ss_pred HHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhhHHhhhhhh-------------hhhee---
Confidence 13457789999999999999999999999999988887777766666555444433 23441
Q ss_pred HHHHHHHHHHHHHHHhccCcchhhhhhccccccchhhhhhhhhcccchHHHHHHHHHHHHHHHhc-CCccc---------
Q 037301 195 GLVLAIVCACFIIIVNGAGEESAEREANDHEEERPKRSRLRRIVASLPSAFIVFLLGVILAFVRR-PNVVK--------- 264 (453)
Q Consensus 195 ~~~l~~~~l~~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~iP~aLi~vv~g~~l~~~~~-~~~~~--------- 264 (453)
+++..+.++++.. |- .+-+.+. ...+|.+..+|+|- ++.+.+.+.++...- .+..+
T Consensus 174 ---I~l~~~llli~fs-----qy---~~~~~~~--~~~~~~~if~~f~v-ll~i~ivW~~~~iLT~tgay~~~~~~t~~~ 239 (510)
T KOG1292|consen 174 ---ISLPEILLLILFS-----QY---ASLPKKG--FGSRRIQIFSRFPV-LLAIAIVWLYCFILTITGAYPYKPTTTQSS 239 (510)
T ss_pred ---ecHHHHHHHHHHH-----Hh---hhccccc--ccccccchHhhccH-HHHHHHHHHHHHHHHhccccCCCccccCCc
Confidence 1222222332222 00 0000000 11122345666754 344444444443221 00000
Q ss_pred -------ccccC----CCcc-cccccChhhh-HHhHHhhhcchhHHHHHHHHHHHHH--HHhhhCCC---CCCCCChhHH
Q 037301 265 -------DINFG----PSSI-EVLKITKHAW-KEGFIKGTIPQLPLSVLNSVIAVCK--LSADLFPG---KHFSATSVSV 326 (453)
Q Consensus 265 -------~i~~g----~~~P-~~~~p~~~~~-~~~~~~l~lp~l~ltll~svia~~~--la~~~~~~---~~~~~~~el~ 326 (453)
.++.. .+.| +|..|+|+.- .-++... ++...+.++.. .+++.... .+...||-..
T Consensus 240 ~RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa-------~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~ 312 (510)
T KOG1292|consen 240 CRTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAA-------SLVAMIESTGDYIACARLSSATPPPPSVLNRGIG 312 (510)
T ss_pred ccccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHH-------HHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhh
Confidence 00000 0111 2334544310 0011111 11111111111 12222211 2345688888
Q ss_pred HHhHHHHHhhhcCcccccccc---ccccccccCCCcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHH
Q 037301 327 TVGLMNLVGCWFGAMPCCHGA---GGLAGQYKFGGRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLL 398 (453)
Q Consensus 327 a~GlaNl~~~~fGg~p~~~s~---~~sa~n~~~GaRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalL 398 (453)
.+|++.++++.||.-...... .+.-.--|-|.|+ .--+.|.+++++.++ + ..-.+++.||.+..|+++
T Consensus 313 ~eGig~lL~gl~G~gtG~Tt~~ENigll~vTKVgSRr--vvQ~aa~fmI~~~i~-g-KFgA~fAsIP~piv~~l~ 383 (510)
T KOG1292|consen 313 WEGIGSLLAGLFGTGTGSTTSVENIGLLGVTKVGSRR--VVQIAAGFMIFFGIF-G-KFGAFFASIPDPIVGGLL 383 (510)
T ss_pred hhhHHHHHHHhhCCCccceeeccceeeEeeeeeeeee--ehhhhHHHHHHHHHH-H-HHHHHHHcCcHHHHHHHH
Confidence 999999999999986542111 1111112345554 456777777777776 1 333499999999999975
No 21
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=97.84 E-value=0.0088 Score=66.92 Aligned_cols=307 Identities=16% Similarity=0.115 Sum_probs=161.8
Q ss_pred hhhHHHHHHHHHHHHHHHhCCcccc----chhHHHH--HHHHHcCCCCCHHH-HHHHHHHHHHHHHHHHHHhHHHHHHhh
Q 037301 76 LGTTLIFTGIYNIVTGAIYGVPMPV----QPMKSIA--AVAISNGSDFGIPE-IMAAGICTGGILFVLGVTGLMHLAYKL 148 (453)
Q Consensus 76 ~~~~l~~~gl~~iv~gl~~~~Pl~v----~p~~a~a--a~~i~~~~~~~~~~-~~~A~ll~G~i~lllGl~rl~~~l~~~ 148 (453)
..=.++.+.+++++-+++.|.|+.+ +|...+= .+-++...+.++-. -.-.++++.++.+++..+.. ..++++
T Consensus 394 v~E~L~stal~GiifslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~~dyl~~r~wVglW~~~l~illaa~~a-s~lv~~ 472 (876)
T KOG1172|consen 394 VVETLLSTALCGIIFSLFGGQPLLILGVTGPLLVFEKALFKFCKDNGLDYLAFRAWVGLWTAFLLILLAATNA-SSLVKY 472 (876)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHHHHhhCCCchhhHHHHHHHHHHHHHHHHHHhhh-hHHHHH
Confidence 3345667899999999999999743 5653322 23455532333322 22357899999999999997 899999
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhhhhhhcc----cc-------------ccccc----cCCCCccchhHHHHHHHHHHHHH
Q 037301 149 IPLPVVRGIQLSQGLSFAMSAVKYIRNVQ----DF-------------AKSKV----KGNRHWLGLDGLVLAIVCACFII 207 (453)
Q Consensus 149 IP~~Vv~G~~aGigl~i~~~ql~~~~g~~----~~-------------~~~~~----l~~~~~~~~~~~~l~~~~l~~li 207 (453)
+-+.-=-.|-.=|.++++...++.+...- .. ..... .....|. .+..+++++..+-.+
T Consensus 473 ~TRfteEiF~~LIs~iFi~eai~kl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~llslil~~gt~ 551 (876)
T KOG1172|consen 473 ITRFTEEIFGLLISLIFIYEAIKKLIKIFKGLPIEFDSKPNPGADWSGPECESVSGTLLGSSCR-PDTALLSLILMFGTL 551 (876)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCcccccccccccccCcccCCCcCC-cchHHHHHHHHHHHH
Confidence 99999999999899999999998655321 00 00000 0011111 122222222111111
Q ss_pred HHhccCcchhhhhhccccccchhhhh-hhhhcccch---HHHHHHHHHHHHHHHhcCCccccccc----CCCccc---cc
Q 037301 208 IVNGAGEESAEREANDHEEERPKRSR-LRRIVASLP---SAFIVFLLGVILAFVRRPNVVKDINF----GPSSIE---VL 276 (453)
Q Consensus 208 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~iP---~aLi~vv~g~~l~~~~~~~~~~~i~~----g~~~P~---~~ 276 (453)
.+. --..++ |+.+ -+++.|++= +..+.+++-..+.+..+....+.++. +++.|. |.
T Consensus 552 ~~a---~~lr~f----------r~s~yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~~~~kl~vp~~~~~t~~~~rgw~ 618 (876)
T KOG1172|consen 552 FLA---LTLRKF----------KSSRYFPRKVRSLISDFGVPLSILVFSLIDYFGGSVETPKLPVPSVFPPTWPFDRGWF 618 (876)
T ss_pred HHH---HHHHHh----------ccCCccchHHHHHHHhhhhHHHHHHHHHHHhhccccCCCccccCcCCCCCCcccCCee
Confidence 011 000111 1100 011111111 23333444344444332111122211 111111 11
Q ss_pred ccC---hhhhHHhHHhhhcchhHHHHHHHHH-HH-HHHHhhh-CC-CCCCCCChhHHHHhHHHHHhhhcCcccccccccc
Q 037301 277 KIT---KHAWKEGFIKGTIPQLPLSVLNSVI-AV-CKLSADL-FP-GKHFSATSVSVTVGLMNLVGCWFGAMPCCHGAGG 349 (453)
Q Consensus 277 ~p~---~~~~~~~~~~l~lp~l~ltll~svi-a~-~~la~~~-~~-~~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~~~ 349 (453)
.|. .+.| ..+...+|.+.++++.-+- -+ +.++.++ +. +|...-.=++.-.|+.|.++|+||=-+.|+...+
T Consensus 619 v~~~~~~P~~--~~~~A~ipalll~iLiFmDqqIts~iv~rke~kLKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~ 696 (876)
T KOG1172|consen 619 VPPFGKNPWW--YVFAALIPALLLTILIFMDQQITAVIVNRKENKLKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQ 696 (876)
T ss_pred eCCCCCCCHH--HHHHHHHHHHHHHHHHHhcchHHHHHhhcccccCCCCcchhHHHHHHHHHHHHHHhcCCCcccccccc
Confidence 111 1111 2233344444444431110 01 2233221 11 1223334588899999999999998888877665
Q ss_pred ccccccCC------------------CcchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHH
Q 037301 350 LAGQYKFG------------------GRSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIE 404 (453)
Q Consensus 350 sa~n~~~G------------------aRT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~ 404 (453)
|-.|.++= --.|.++++.++++.+ ..+..| ++..||+++|-++..+.|+.
T Consensus 697 S~~H~~SL~v~~~~~apge~~~i~~V~EQRvtgll~~llvgl-s~~~~p----vL~~IP~~VL~GvFlYMgv~ 764 (876)
T KOG1172|consen 697 SPMHTKSLAVESETSAPGEQPQIVGVREQRVTGLLQFLLVGL-SVLLLP----VLKLIPMPVLYGVFLYMGVS 764 (876)
T ss_pred CHHHHHHHHHhhcccCCCCccccccchhhhhHHHHHHHHHHH-HHHHHH----HHhhccHHHHHHHHHHHhhc
Confidence 54443331 1357899999988885 444456 99999999998888777763
No 22
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=95.52 E-value=0.0062 Score=65.54 Aligned_cols=99 Identities=18% Similarity=0.195 Sum_probs=15.5
Q ss_pred ChhhHHHHHHHHHHHHHHHhCCccc----cchhHHHH--HHHHHcCCCCCHHHHH-HHHHHHHHHHHHHHHHhHHHHHHh
Q 037301 75 DLGTTLIFTGIYNIVTGAIYGVPMP----VQPMKSIA--AVAISNGSDFGIPEIM-AAGICTGGILFVLGVTGLMHLAYK 147 (453)
Q Consensus 75 p~~~~l~~~gl~~iv~gl~~~~Pl~----v~p~~a~a--a~~i~~~~~~~~~~~~-~A~ll~G~i~lllGl~rl~~~l~~ 147 (453)
...=.++.+++.+++.+++.|.|+. ++|....- -+-+++..++++-..- -.+++++++.+++..+.. .++++
T Consensus 66 gv~e~l~~~~i~Gi~f~lf~gQPL~Ilg~TgP~~vf~~~l~~~~~~~~~~fl~~~~wig~w~~~~~~~~~~~~~-s~lv~ 144 (510)
T PF00955_consen 66 GVMEVLLSTAICGIIFSLFSGQPLTILGSTGPVLVFEKILYKFCKSYGLDFLPFRAWIGIWTAIFLLVLAAFNA-SFLVR 144 (510)
T ss_dssp -HHHHHHHHHHHHHHHHHCC------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccc
Confidence 3445567889999999999999975 35543322 1233442233332222 357999999999999997 89999
Q ss_pred hCCHHHHHHHHHHHHHHHHHHhhhhhh
Q 037301 148 LIPLPVVRGIQLSQGLSFAMSAVKYIR 174 (453)
Q Consensus 148 ~IP~~Vv~G~~aGigl~i~~~ql~~~~ 174 (453)
++.+.-=..|-.=|.++++...++.+.
T Consensus 145 ~~TRfTeEiF~~lIs~iFi~ea~~~l~ 171 (510)
T PF00955_consen 145 YITRFTEEIFALLISIIFIYEAIKKLV 171 (510)
T ss_dssp ---------------------------
T ss_pred ccccccccccccccccccccccccccc
Confidence 999999888888888999999988765
No 23
>COG4392 Predicted membrane protein [Function unknown]
Probab=84.90 E-value=5.5 Score=34.02 Aligned_cols=72 Identities=17% Similarity=0.301 Sum_probs=46.3
Q ss_pred hhhhHHHHHhhccHHHHHHHHHHHHHHHHHhhcccccchhHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHh
Q 037301 378 LGSSLVMVLDQFPVGVLGVLLLFAGIELAMASRDMNSKEEFF-VMLVCTSVSLVGSSAALGFVCGIVVHVLLKI 450 (453)
Q Consensus 378 ~~p~~~~ll~~iP~a~LaalLi~~g~~L~~~~~~~~~~~~~~-v~~~t~~~~~~~~~l~~Gi~~Gi~v~~~l~~ 450 (453)
+.+.+.+++++.|.++++|+.+ -.+-+.....+...+.... ....+.+....+.|+.+.++.|+..+.++++
T Consensus 33 LP~~v~~~L~fvP~a~ltAL~~-p~vl~~~~g~~~s~~~p~llA~lvav~la~lTrnll~~il~Gm~~~~~lr~ 105 (107)
T COG4392 33 LPPWVRRFLSFVPVAILTALIA-PDVLMPHGGLDPSWNNPYLLAGLVAVALAILTRNLLATILVGMASFALLRL 105 (107)
T ss_pred CCHHHHHHHhhccHHHHHHHHh-hhHhccCCCcchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888999999999988632 2222222112222233333 3444555555567999999999999998875
No 24
>PF05437 AzlD: Branched-chain amino acid transport protein (AzlD); InterPro: IPR008407 This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD, a member of this group, has been shown by mutational analysis to be involved in branched-chain amino acid transport, and to be involved in conferring resistance to 4-azaleucine []. However, its exact role in these processes is not yet clear []. Based on its hydropathy profile, it has been suggested to be a membrane protein [].
Probab=79.21 E-value=6.9 Score=32.53 Aligned_cols=68 Identities=19% Similarity=0.275 Sum_probs=43.1
Q ss_pred hhhHHHHHhhccHHHHHHHHHHHHHHHHHhhccc--c-cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 037301 379 GSSLVMVLDQFPVGVLGVLLLFAGIELAMASRDM--N-SKEEFFVMLVCTSVSLVGSSAALGFVCGIVVHVLLK 449 (453)
Q Consensus 379 ~p~~~~ll~~iP~a~LaalLi~~g~~L~~~~~~~--~-~~~~~~v~~~t~~~~~~~~~l~~Gi~~Gi~v~~~l~ 449 (453)
.+.+-.+++++|.++++++++..- .....+. + +..+..-..+++.......|+...+++|++++.+++
T Consensus 29 ~~~~~~~l~~vp~avl~aLv~~~i---~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~v~~G~~~~~llR 99 (99)
T PF05437_consen 29 PPRVRRFLRYVPPAVLAALVVPSI---FFPTGSLELSLGNPYLIAALVAALVALRTRNLLLSVLAGVAAFALLR 99 (99)
T ss_pred CHHHHHHHHHhHHHHHHHHHHHHH---ccCccccccccchHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhC
Confidence 345667899999999998754433 3222211 1 223333444455555555699999999999998764
No 25
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=78.06 E-value=44 Score=35.04 Aligned_cols=100 Identities=20% Similarity=0.163 Sum_probs=62.4
Q ss_pred HHHHHcCCCh-----hhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhH
Q 037301 67 ALTLAKDLDL-----GTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLGVTGL 141 (453)
Q Consensus 67 a~a~~aGlp~-----~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~rl 141 (453)
+.+...|-+. .-.+.+-|+++++.+++.+.|.....-++.. ...+. ..+ +. +.+++|++.++++++.-
T Consensus 241 a~~~~~g~~~~~~~~~~~l~~~Gi~~i~aglfG~~p~t~~~~~~~~-~~~tg--~~s-r~---~~~~~~~~lil~~l~~~ 313 (406)
T TIGR03173 241 ALGEITGRPITEKDLAGGLRADGLGSALGGLFNTFPYTSFSQNVGL-VQLTG--VKS-RY---VVAAAGVILVLLGLFPK 313 (406)
T ss_pred HHHHHhCCCCCchhccchHHhccHHHHHHHHhCCCCCcchhhhHHH-HHHhC--CCc-hH---hHHHHHHHHHHHHHHHH
Confidence 3555566432 3678888999999999999886532222111 11222 112 22 23677788888898865
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhh
Q 037301 142 MHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYI 173 (453)
Q Consensus 142 ~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~ 173 (453)
...+.+.+|.+|+.|...-.--.+...+++.+
T Consensus 314 ~~~l~~~iP~~vlgg~~l~~~~~i~~~g~~~l 345 (406)
T TIGR03173 314 LAALVASIPQPVLGGAGLVMFGMVAASGIRIL 345 (406)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999865533333444444444
No 26
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=76.71 E-value=36 Score=35.90 Aligned_cols=101 Identities=19% Similarity=0.197 Sum_probs=69.7
Q ss_pred HHHHHcCCCh------hhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 037301 67 ALTLAKDLDL------GTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLGVTG 140 (453)
Q Consensus 67 a~a~~aGlp~------~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~r 140 (453)
+.+..+|-+. .-++.+-|+++++.|++.+.|....--|+.. ...+ +..-+. +...+|++.+++|++.
T Consensus 256 a~a~~~g~~~~~~~~~~r~l~adGl~~i~aglfG~~p~t~~sen~g~-~~~T---~~~sr~---~~~~~a~~~i~~~l~p 328 (415)
T TIGR00801 256 ATADVSGRDLSGDPRLHRGVLADGLATLLAGLFGGFPNTTFAQNIGV-IALT---RVASRW---VIVGAAVILIALGFFP 328 (415)
T ss_pred HHHHHhCCCCCCCccccchHHHhhHHHHHHHhcCCCCCcchhhhhee-eeec---CCCchH---HHHHHHHHHHHHHHHH
Confidence 3566677643 3788899999999999988886542111111 1111 222122 5578888999999996
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhh
Q 037301 141 LMHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIR 174 (453)
Q Consensus 141 l~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~ 174 (453)
-++.+...+|.||+-|...-.--.+...+++.+.
T Consensus 329 k~~~l~~~iP~~vlgg~~l~~~~~i~~~gi~~l~ 362 (415)
T TIGR00801 329 KIAALITSIPSPVLGGASIVMFGMIAASGIRILI 362 (415)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999998888666666677777664
No 27
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=74.85 E-value=30 Score=36.43 Aligned_cols=94 Identities=15% Similarity=0.196 Sum_probs=65.5
Q ss_pred HHHHHcCCC--hhhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHH-hH
Q 037301 67 ALTLAKDLD--LGTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNG--SDFGIPEIMAAGICTGGILFVLGVT-GL 141 (453)
Q Consensus 67 a~a~~aGlp--~~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~--~~~~~~~~~~A~ll~G~i~lllGl~-rl 141 (453)
+.+..+|-+ ....+..+|+.+++.+.+.+.++.++. +. .+++.+ .+.+...=..+.+.+|++.+++|++ +.
T Consensus 245 avl~aaGy~~p~~~~~~~tGl~sll~ApfGg~~~nlaa---it-aAic~G~~ah~d~~rR~~a~i~~Gv~yll~glfag~ 320 (395)
T TIGR00843 245 AALKAAGYNAPAKPIIAAAGLAALFAAFAGGISIGIAA---IT-AAICMGKDAHEDKDKRWIAAAAAGIFYLLAGLFAGA 320 (395)
T ss_pred HHHHHcCCCCCchHHHHHHHHHHHHHhccCCchhhhhH---Hh-HHHhcCcccccCcCccchHHHHHHHHHHHHHHHHHH
Confidence 355555653 445666889999999988888876542 11 123332 1233444557889999999999999 77
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHHH
Q 037301 142 MHLAYKLIPLPVVRGIQLSQGLSF 165 (453)
Q Consensus 142 ~~~l~~~IP~~Vv~G~~aGigl~i 165 (453)
...+...+|..++.. ++|++++=
T Consensus 321 i~~l~~~~P~~li~~-laGlAll~ 343 (395)
T TIGR00843 321 ITALFAALPKELIAA-LAGLALLG 343 (395)
T ss_pred HHHHHHHCCHHHHHH-HHHHHHHH
Confidence 788999999998865 67777753
No 28
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=72.00 E-value=6.1 Score=42.17 Aligned_cols=84 Identities=23% Similarity=0.337 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhccHHHHHHHHHHHHHHHHHhhccc--------c-----cchhHHHHHHHHHHHH
Q 037301 363 CVALLGAVKMVLGLVLGSSLVMVLDQFPVGVLGVLLLFAGIELAMASRDM--------N-----SKEEFFVMLVCTSVSL 429 (453)
Q Consensus 363 a~v~~G~~~ll~~L~~~p~~~~ll~~iP~a~LaalLi~~g~~L~~~~~~~--------~-----~~~~~~v~~~t~~~~~ 429 (453)
+-+.+|+++.++..++.- .+.+.+|.-+.|.+++++|..|+...-+. . +.+...+.++|.+.++
T Consensus 111 ~ii~ag~~~~li~~~~~~---~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~~~~~~~~~~~~l~la~~tl~~il 187 (451)
T COG2233 111 GIIAAGLVYFLISPIVKI---RLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAAGNPDFGSLENLGLALVTLLIIL 187 (451)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCCCCCcccCchhHHHHHHHHHHHHH
Confidence 556777777776666541 38899999999999999999998864221 0 1222345555544444
Q ss_pred HH----------hHHHHHHHHHHHHHHHHH
Q 037301 430 VG----------SSAALGFVCGIVVHVLLK 449 (453)
Q Consensus 430 ~~----------~~l~~Gi~~Gi~v~~~l~ 449 (453)
.. .++..|+++|.++++.+-
T Consensus 188 ~~~~f~~g~~~~i~ILiGlv~G~~la~~~G 217 (451)
T COG2233 188 LINRFGKGFLRRIPILIGLVVGYLLALFMG 217 (451)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 32 278889999998888764
No 29
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=70.75 E-value=28 Score=37.11 Aligned_cols=91 Identities=15% Similarity=0.160 Sum_probs=64.1
Q ss_pred hhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHH
Q 037301 77 GTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLPVVRG 156 (453)
Q Consensus 77 ~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G 156 (453)
.-++.+-|+.+++.|++.+.|...-.-|+.. ..++ +..-.. .+..+|++++++|++.-++.+...||.||+-|
T Consensus 278 ~rgi~~dGi~s~laglfg~~p~tt~sqNvGv-i~~T---gV~SR~---v~~~aa~ilillgl~PK~~alia~IP~pVlGg 350 (433)
T PRK11412 278 RRSFVATGFMTLITVPLAVIPFSPFVSSIGL-LTQT---GDYRRR---SFIYGSVMCLLVALIPALTRLFCSIPLPVSSA 350 (433)
T ss_pred ccchhhccHHHHHHHhcCCCCCCchhhhhhh-hhhc---CCchhH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 3567777888888888777776443333322 2222 222222 23567779999999998999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhh
Q 037301 157 IQLSQGLSFAMSAVKYIR 174 (453)
Q Consensus 157 ~~aGigl~i~~~ql~~~~ 174 (453)
...-.--.++..+++.+.
T Consensus 351 ~~~~~Fg~I~~~Gi~~l~ 368 (433)
T PRK11412 351 VMLVSYLPLLGSALVFSQ 368 (433)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 887777777788887664
No 30
>PF02308 MgtC: MgtC family; InterPro: IPR003416 The MgtC protein is found in an operon with the Mg2+ transporter protein MgtB. The function of MgtC and its homologues is not known, but it is thought that MgtC may act as an accessory protein for MgtB, thus mediating magnesium influx into the cytosol. Also included in this family are the Bacillus subtilis SapB protein and several hypothetical proteins.; GO: 0016020 membrane
Probab=68.53 E-value=85 Score=27.76 Aligned_cols=39 Identities=8% Similarity=0.198 Sum_probs=24.9
Q ss_pred cchhHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHhhc
Q 037301 414 SKEEFFVMLVCTSVSLVGS--SAALGFVCGIVVHVLLKIRK 452 (453)
Q Consensus 414 ~~~~~~v~~~t~~~~~~~~--~l~~Gi~~Gi~v~~~l~~~~ 452 (453)
.-+.+...++|+..+.... ....++...+++..++..|+
T Consensus 83 GlTTaaal~~t~~iG~l~g~g~~~~A~~~~v~~~~iL~~k~ 123 (134)
T PF02308_consen 83 GLTTAAALWLTFAIGALVGAGYYVLAVAAAVLVLIILALKR 123 (134)
T ss_pred cHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 4445566677777666432 45677888887777665544
No 31
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=67.98 E-value=1.9e+02 Score=31.72 Aligned_cols=83 Identities=20% Similarity=0.220 Sum_probs=54.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHH
Q 037301 73 DLDLGTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLP 152 (453)
Q Consensus 73 Glp~~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~ 152 (453)
-.|+.--+++.|+.+++.+++.+.|..-+..- .+.....+ +-+. .+++++|++.++..++- ..+.+++|.+
T Consensus 290 ~~d~n~El~a~G~~N~~~~~fg~~p~~~s~sr--s~~~~~~G-~~t~----~a~i~~~~~~l~~~l~~--~~~l~~iP~~ 360 (563)
T TIGR00815 290 KIDANQELVAQGIANIVGSFFSCYPATGSLSR--TAVNAKAG-CRTQ----LSGVVTAIVVLLVLLVL--TPLFYYIPQA 360 (563)
T ss_pred CCCCcHHHHHhhHHHHHHHHhCccCCCCcchH--HHHHHhcC-Ccch----HHHHHHHHHHHHHHHHH--HHHHHhChHH
Confidence 46677888999999999999999997644322 12222222 1121 34455565655555553 3578999999
Q ss_pred HHHHHHHHHHHH
Q 037301 153 VVRGIQLSQGLS 164 (453)
Q Consensus 153 Vv~G~~aGigl~ 164 (453)
+..|++.-+++.
T Consensus 361 ~la~ili~~~~~ 372 (563)
T TIGR00815 361 ALAAIIISAVRG 372 (563)
T ss_pred HHHHHHHHHHhc
Confidence 999988877766
No 32
>PRK10720 uracil transporter; Provisional
Probab=66.32 E-value=22 Score=37.75 Aligned_cols=91 Identities=19% Similarity=0.196 Sum_probs=63.4
Q ss_pred hhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHHHHHH
Q 037301 77 GTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLPVVRG 156 (453)
Q Consensus 77 ~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~Vv~G 156 (453)
.-++.+-|+++++.+++.+.|...-.-|... .+.+ +..-.. .+.++|++++++|++.-++.+...||.||+-|
T Consensus 263 ~r~l~adGlatii~glfG~~p~tty~en~g~-ia~T---~v~sr~---v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg 335 (428)
T PRK10720 263 HRSMFANGLSTVISGFFGSTPNTTYGENIGV-MAIT---RVYSTW---VIGGAAIIAILLSCVGKLAAAIQAIPLPVMGG 335 (428)
T ss_pred cchHhhhhHHHHHHHhcCCCCccccccccce-eeec---ccchhH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 5678888999999998888876432111111 1111 121122 23457778999999777788999999999999
Q ss_pred HHHHHHHHHHHHhhhhhh
Q 037301 157 IQLSQGLSFAMSAVKYIR 174 (453)
Q Consensus 157 ~~aGigl~i~~~ql~~~~ 174 (453)
...-.--.+...+++.+.
T Consensus 336 ~~i~~fg~i~~~Gi~~l~ 353 (428)
T PRK10720 336 VSLLLYGVIGASGIRVLI 353 (428)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 998777777788888774
No 33
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=64.20 E-value=54 Score=34.86 Aligned_cols=87 Identities=18% Similarity=0.242 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhH-HHHHhhccHHHHHHHHHHHHHHHHHhhcccc---c--chhHHHHHHHHHHHHHH----
Q 037301 362 GCVALLGAVKMVLGLVLGSSL-VMVLDQFPVGVLGVLLLFAGIELAMASRDMN---S--KEEFFVMLVCTSVSLVG---- 431 (453)
Q Consensus 362 la~v~~G~~~ll~~L~~~p~~-~~ll~~iP~a~LaalLi~~g~~L~~~~~~~~---~--~~~~~v~~~t~~~~~~~---- 431 (453)
.+.++.|+++++++++.-... -.+.+.+|.-+.|.+++.+|+.+....-+.. + ....++.+++.+..-.+
T Consensus 114 ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~~~~~~~~~~~al~tl~~i~l~~l~~~~~ 193 (429)
T TIGR03616 114 GGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASGFDSWMAVLTILCIGAVAVFTRGM 193 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 466777777776666431101 1256789999999999999999987543221 1 11222222222221111
Q ss_pred ---hHHHHHHHHHHHHHHHH
Q 037301 432 ---SSAALGFVCGIVVHVLL 448 (453)
Q Consensus 432 ---~~l~~Gi~~Gi~v~~~l 448 (453)
+++..|+++|.+++..+
T Consensus 194 l~~~avLiGivvG~iva~~l 213 (429)
T TIGR03616 194 LQRLLILVGLIAAYLAYFIL 213 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 27788888888887654
No 34
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=53.72 E-value=1.1e+02 Score=32.12 Aligned_cols=92 Identities=14% Similarity=0.236 Sum_probs=60.9
Q ss_pred HHHHcCCChh--hHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHHhH-H
Q 037301 68 LTLAKDLDLG--TTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNG--SDFGIPEIMAAGICTGGILFVLGVTGL-M 142 (453)
Q Consensus 68 ~a~~aGlp~~--~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~--~~~~~~~~~~A~ll~G~i~lllGl~rl-~ 142 (453)
.....|-+|. ..+..+|+.+++.+.+.+.++.++. +. .+++.+ .+-+++.=..+++.+|++.+++|++.- .
T Consensus 230 VL~a~GY~~p~~~~~~~tGl~s~l~ApfGg~~~nlAa---it-aAIc~g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~ 305 (378)
T PF03594_consen 230 VLRAAGYQPPVNPLITVTGLASLLAAPFGGHAVNLAA---IT-AAICAGPEAHPDPSRRYIAAVAAGVFYLLFGLFAAAL 305 (378)
T ss_pred HHHHcCCCCCchHHHHHHHHHHHHHhhhchhhhHHHH---HH-HHHHcCCccCCCcccchHHHHHHhHHHHHHHHHHHHH
Confidence 5555666544 5566889999999999888876542 11 233333 233445555778899999999999873 1
Q ss_pred HHHHhhCCHHHHHHHHHHHHHH
Q 037301 143 HLAYKLIPLPVVRGIQLSQGLS 164 (453)
Q Consensus 143 ~~l~~~IP~~Vv~G~~aGigl~ 164 (453)
-.+....|+.++. .++|++++
T Consensus 306 v~l~~~lP~~li~-~lAGLALl 326 (378)
T PF03594_consen 306 VALFAALPPALIA-ALAGLALL 326 (378)
T ss_pred HHHHHhCCHHHHH-HHHHHHHH
Confidence 2345678888775 46777764
No 35
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=52.97 E-value=1.3e+02 Score=31.39 Aligned_cols=100 Identities=21% Similarity=0.253 Sum_probs=63.2
Q ss_pred HHHHcCCCh------hhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhH
Q 037301 68 LTLAKDLDL------GTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLGVTGL 141 (453)
Q Consensus 68 ~a~~aGlp~------~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~rl 141 (453)
.+..+|.+. .-++..-|+.+++.+++...|...-.-++.. ..... -.+-. .++.++++.+++++..-
T Consensus 255 ~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~G~~~~t~~~en~g~-i~~t~--v~Sr~----~~~~a~~~~i~~~~~p~ 327 (389)
T PF00860_consen 255 VARIAGKDDPRPPRIRRGLLADGLGTILAGLFGTSPTTTYSENAGG-IAATG--VASRR----VGLTAGVILILFGLSPK 327 (389)
T ss_dssp HHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHHT---EEE-HHHHHH-HHHHT--B--HH----HHHHHHHHHHHHT--HH
T ss_pred HHHHhCCCCccchhhcccceeeeeeeeechhhcCCCCccccccchh-hhhhc--cccce----eeeHHHHHHHHHhhHHH
Confidence 555666553 3677788999999998888887654333332 22222 12222 34666778888888888
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHHHHHHhhhhhh
Q 037301 142 MHLAYKLIPLPVVRGIQLSQGLSFAMSAVKYIR 174 (453)
Q Consensus 142 ~~~l~~~IP~~Vv~G~~aGigl~i~~~ql~~~~ 174 (453)
+..+...||.+|+.|...=.--.++.++++.+-
T Consensus 328 ~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~ 360 (389)
T PF00860_consen 328 FAPLFASIPSPVIGGPLLVLFGMIMMSGIRNID 360 (389)
T ss_dssp HHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHhHhhe
Confidence 899999999999998877666677788888763
No 36
>PF07178 TraL: TraL protein; InterPro: IPR009838 This entry represents bacterial TraL proteins. TraL is a predicted peripheral membrane protein involved in bacterial sex pilus assembly []. TraL is part of the type IV secretion system for conjugative plasmid transfer []. The exact function of TraL is unknown.; GO: 0000746 conjugation, 0019867 outer membrane
Probab=49.21 E-value=42 Score=27.88 Aligned_cols=37 Identities=19% Similarity=0.362 Sum_probs=30.5
Q ss_pred cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHh
Q 037301 414 SKEEFFVMLVCTSVSLVGSSAALGFVCGIVVHVLLKI 450 (453)
Q Consensus 414 ~~~~~~v~~~t~~~~~~~~~l~~Gi~~Gi~v~~~l~~ 450 (453)
+.+|..++++.++.++......+|+++|++++..++.
T Consensus 19 ~~De~~~~~~~~~~gi~~~~~~~g~i~g~~~~~~~~k 55 (95)
T PF07178_consen 19 PMDEFIPALILFVIGILSGHFLIGLILGIVLWWGYRK 55 (95)
T ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 4667788888888888777889999999999887754
No 37
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=42.27 E-value=76 Score=29.58 Aligned_cols=13 Identities=8% Similarity=-0.089 Sum_probs=8.7
Q ss_pred CCcHHHHHHHhhh
Q 037301 28 SNSPAKIIHKVKK 40 (453)
Q Consensus 28 ~~~~~~~~~~~~~ 40 (453)
..+-.+.|++.++
T Consensus 24 ~L~W~~ffkLRk~ 36 (173)
T PF08566_consen 24 QLTWNEFFKLRKS 36 (173)
T ss_pred CCCHHHHHHHHHH
Confidence 4666777777655
No 38
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=41.62 E-value=56 Score=31.94 Aligned_cols=83 Identities=23% Similarity=0.283 Sum_probs=52.2
Q ss_pred CCChhhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHH
Q 037301 73 DLDLGTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLP 152 (453)
Q Consensus 73 Glp~~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~ 152 (453)
..|+.--+++.|+.+++.+++.+.|..-+...... ....+. -+ -.+++++|++.++.-++. ..+.+++|.+
T Consensus 178 ~~d~n~El~a~G~aNi~s~~~gg~p~~~s~srs~~--~~~~Ga-~t----~~s~~~~~~~~l~~l~~~--~~~l~~iP~~ 248 (280)
T PF00916_consen 178 RIDPNQELIALGLANIVSGLFGGMPGSGSFSRSAV--NYRAGA-RT----RLSGLISALFVLLVLLFL--APLLAYIPKA 248 (280)
T ss_pred cCCcHHHHHHhhhccccchhhcccccccccccchH--HHhcCc-ce----eehhHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 36677888999999999999999997654322211 111111 11 123455555554443333 3467899999
Q ss_pred HHHHHHHHHHHH
Q 037301 153 VVRGIQLSQGLS 164 (453)
Q Consensus 153 Vv~G~~aGigl~ 164 (453)
+..|++.-++.-
T Consensus 249 ~La~ili~~~~~ 260 (280)
T PF00916_consen 249 VLAAILIVVGIS 260 (280)
T ss_pred HHHHHHHHHHHh
Confidence 999887766655
No 39
>PRK11660 putative transporter; Provisional
Probab=41.22 E-value=5.2e+02 Score=28.40 Aligned_cols=85 Identities=14% Similarity=0.182 Sum_probs=53.1
Q ss_pred CCChhhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHH
Q 037301 73 DLDLGTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLP 152 (453)
Q Consensus 73 Glp~~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~ 152 (453)
-.|+.--+++.|+++++.+++.+.|..-+..-. +.....+ +.+. .+++++|+++++.=++- .-+.++||.+
T Consensus 310 ~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~srS--a~n~~aG-arT~----la~iv~a~~~ll~ll~l--~~ll~~iP~~ 380 (568)
T PRK11660 310 KHSANSELVGQGLGNIVAPFFGGITATAAIARS--AANVRAG-ATSP----ISAVIHALLVLLALLVL--APLLSYLPLS 380 (568)
T ss_pred CCCCcHHHHHHhHHHHHHHHhCcccccchHHHH--HHHHhcC-CCcH----HHHHHHHHHHHHHHHHH--HHHHHhCcHH
Confidence 456667788999999999999999975432111 2223332 1222 34455555443332222 3468999999
Q ss_pred HHHHHHHHHHHHHH
Q 037301 153 VVRGIQLSQGLSFA 166 (453)
Q Consensus 153 Vv~G~~aGigl~i~ 166 (453)
+..+++.-+++.+.
T Consensus 381 vLa~ili~~~~~m~ 394 (568)
T PRK11660 381 AMAALLLMVAWNMS 394 (568)
T ss_pred HHHHHHHHHHHHhh
Confidence 99998887776653
No 40
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=40.59 E-value=1.6e+02 Score=34.46 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=63.8
Q ss_pred CCCCCCChhHHHHhHHHHHhhhcCcccccc-cccc-------------ccccccCCCcchHHHHHHHHHHHHHHHHhhhh
Q 037301 316 GKHFSATSVSVTVGLMNLVGCWFGAMPCCH-GAGG-------------LAGQYKFGGRSGGCVALLGAVKMVLGLVLGSS 381 (453)
Q Consensus 316 ~~~~~~~~el~a~GlaNl~~~~fGg~p~~~-s~~~-------------sa~n~~~GaRT~la~v~~G~~~ll~~L~~~p~ 381 (453)
+.....+..+.+++++.++=++|||-|.|- +.+| ..-+..+=.-..|.+++++++.++++.+=+..
T Consensus 398 ~g~~gv~E~Llstai~Giifslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~~~yl~~~~WigiW~~~~~~lla~~~~s~ 477 (900)
T TIGR00834 398 RNMMGVSELLISTAVQGVLFALLAAQPLLVVGFSGPLLVFEEAFFSFCESNGLEYLVGRVWIGLWLVLLVLLLVATEGSF 477 (900)
T ss_pred CCcchHHHHHHHHHHHHHHHhhhcCCceEEecCcccHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 557889999999999999999999999863 2221 01123344456688899999999888887888
Q ss_pred HHHHHhhccHHHHHHH
Q 037301 382 LVMVLDQFPVGVLGVL 397 (453)
Q Consensus 382 ~~~ll~~iP~a~Laal 397 (453)
++.++..+.....+.+
T Consensus 478 lvryiTRFTeEiFa~l 493 (900)
T TIGR00834 478 LVRYISRFTQEIFSFL 493 (900)
T ss_pred HHHHHHhhHHHHHHHH
Confidence 8999999998888775
No 41
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=36.00 E-value=4.5e+02 Score=26.79 Aligned_cols=24 Identities=13% Similarity=0.119 Sum_probs=16.2
Q ss_pred CCCCChhHHHHhHHHHHhhhcCcc
Q 037301 318 HFSATSVSVTVGLMNLVGCWFGAM 341 (453)
Q Consensus 318 ~~~~~~el~a~GlaNl~~~~fGg~ 341 (453)
--+.||.+-..|-+.++--++++.
T Consensus 150 ~~e~~Rll~~vG~a~iLPQlLAaL 173 (308)
T PF06166_consen 150 LKESRRLLDQVGWAAILPQLLAAL 173 (308)
T ss_pred hHHHHHHHHHhhHHHHHHHHHHHH
Confidence 346677888888877766555544
No 42
>PRK13707 conjugal transfer pilus assembly protein TraL; Provisional
Probab=33.20 E-value=98 Score=26.19 Aligned_cols=37 Identities=14% Similarity=0.335 Sum_probs=30.1
Q ss_pred cchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHh
Q 037301 414 SKEEFFVMLVCTSVSLVGSSAALGFVCGIVVHVLLKI 450 (453)
Q Consensus 414 ~~~~~~v~~~t~~~~~~~~~l~~Gi~~Gi~v~~~l~~ 450 (453)
+.+|.+++++.++.++.+.....|+++|++++..++.
T Consensus 25 ~~DE~~~~~~~~~~Gi~~~~~l~g~i~g~~~~~~~r~ 61 (101)
T PRK13707 25 PLDELIPAAICIGWGITTSKYLFGIIAAVLVWFGIRK 61 (101)
T ss_pred eHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHHH
Confidence 4567888888888888766788999999999887754
No 43
>PTZ00016 aquaglyceroporin; Provisional
Probab=31.85 E-value=2.9e+02 Score=27.85 Aligned_cols=13 Identities=23% Similarity=0.112 Sum_probs=8.8
Q ss_pred CCCCCCCCccccc
Q 037301 2 ESQNHHIPHYQTS 14 (453)
Q Consensus 2 ~~~~~~~~~~~~~ 14 (453)
|..|.|.||.|.+
T Consensus 4 ~~~~~~~~~~~~~ 16 (294)
T PTZ00016 4 EKDNVCYPMELQL 16 (294)
T ss_pred CCCCcccccHHHh
Confidence 5567888877643
No 44
>KOG3142 consensus Prenylated rab acceptor 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.25 E-value=3.9e+02 Score=25.25 Aligned_cols=59 Identities=20% Similarity=0.290 Sum_probs=34.4
Q ss_pred HHhhccHHHHHHHHHHHHHHHHHhhccc---------ccchhHHHHHHHHHHHHHHh----HHHHHHHHHHHH
Q 037301 385 VLDQFPVGVLGVLLLFAGIELAMASRDM---------NSKEEFFVMLVCTSVSLVGS----SAALGFVCGIVV 444 (453)
Q Consensus 385 ll~~iP~a~LaalLi~~g~~L~~~~~~~---------~~~~~~~v~~~t~~~~~~~~----~l~~Gi~~Gi~v 444 (453)
++.+ |...+.-+.++++|-.....|+. +|+.-.....+.++..+++. ++.|++.+|+++
T Consensus 85 Li~~-P~~Livl~~lv~~w~~LY~~rd~pLvlfgr~i~d~~~l~~L~~~ti~~lflt~~~~~l~~~l~~g~~v 156 (187)
T KOG3142|consen 85 LITH-PLSLIVLLALVAAWLFLYFLRDEPLVLFGRQISDREVLIGLVLITIPVLFLTSAGSNLLWALGAGLVV 156 (187)
T ss_pred HHHh-HHHHHHHHHHHHHHHheeeecCCCeEEeeEEecCcchhhhHHHHHHHHHHHhhHHHHHHHHHHHhHHH
Confidence 6666 88888777777777766555431 24444444334444444343 567777776654
No 45
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=28.52 E-value=6.5e+02 Score=25.67 Aligned_cols=124 Identities=12% Similarity=0.109 Sum_probs=67.2
Q ss_pred CCCCCChhHHHHhHHHHHhhhcCccccccccccccccccCCC----cchHHHHHHHHHHHHHHHHhhhhHHHHHhhccHH
Q 037301 317 KHFSATSVSVTVGLMNLVGCWFGAMPCCHGAGGLAGQYKFGG----RSGGCVALLGAVKMVLGLVLGSSLVMVLDQFPVG 392 (453)
Q Consensus 317 ~~~~~~~el~a~GlaNl~~~~fGg~p~~~s~~~sa~n~~~Ga----RT~la~v~~G~~~ll~~L~~~p~~~~ll~~iP~a 392 (453)
+..++++-.+--++.|++++++.|..+.+.....-.+.+.-. +..+..+++.++-...-++++ ....+|.+
T Consensus 17 ~al~~~~A~ila~i~~~lGa~l~G~~V~~ti~~~iv~~~~~~~~~~~~~~~~~~~al~~a~iw~~i~-----t~~glPvS 91 (326)
T PF01384_consen 17 RALTPRQALILAAIFNFLGALLFGTAVAETIGKGIVDPSYFTVDDPQILMIGMLAALLAAAIWLLIA-----TWLGLPVS 91 (326)
T ss_pred CccCHHHHHHHHHHHHHhHHHHhhHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHH-----HHhCCCch
Confidence 357889999999999999999988887665544333222211 111223333333222222222 56678887
Q ss_pred HHHHHH-HHHHHHHHHhh-cccccchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHh
Q 037301 393 VLGVLL-LFAGIELAMAS-RDMNSKEEFFVMLVCTSVSLVGSSAALGFVCGIVVHVLLKI 450 (453)
Q Consensus 393 ~LaalL-i~~g~~L~~~~-~~~~~~~~~~v~~~t~~~~~~~~~l~~Gi~~Gi~v~~~l~~ 450 (453)
..=+++ -++|..+.... +.. ++.+.+ .- +....+.+...|++++.+++.+++.
T Consensus 92 tThalvGal~G~~l~~~g~~~v-~w~~~~---~~-I~~~wv~sPlia~~~a~~l~~~~~~ 146 (326)
T PF01384_consen 92 TTHALVGALIGAGLASGGFSAV-NWSKGL---LK-IVLSWVISPLIAFILAYILYRLIRR 146 (326)
T ss_pred HHHHHHHHHHHHHHHHhhhhhc-hHHHHH---HH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 763332 34666666553 111 122111 11 1122235778888888888776653
No 46
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=26.62 E-value=9e+02 Score=26.70 Aligned_cols=81 Identities=27% Similarity=0.353 Sum_probs=49.3
Q ss_pred CChhhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhCCHHH
Q 037301 74 LDLGTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGSDFGIPEIMAAGICTGGILFVLGVTGLMHLAYKLIPLPV 153 (453)
Q Consensus 74 lp~~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~~~~~~~~~~A~ll~G~i~lllGl~rl~~~l~~~IP~~V 153 (453)
.|+.--+++-|+++++.+++.|.|..-+.+.. +.-+..+ +-+. .++++.|++.+++-++- .-+.++||.++
T Consensus 280 ~d~nrELiaqGiaNi~sglfgg~p~~g~~srS--~~nv~sG-arT~----lsgi~~a~~lll~l~~~--~~~~~~IP~a~ 350 (554)
T COG0659 280 HDSNRELIAQGIANIASGLFGGIPATGSISRS--AINIKSG-ARTR----LSGIIHAALLLLLLLFL--APLVSYIPLAA 350 (554)
T ss_pred CCCCHHHHHhhHHHHHHHHhCCccccchhHHH--HHHHHhC-CcCh----HHHHHHHHHHHHHHHHH--HHHHHhCcHHH
Confidence 45556678889999999999999975433222 1222222 1222 34455555555554444 34678999999
Q ss_pred HHHHHHHHHH
Q 037301 154 VRGIQLSQGL 163 (453)
Q Consensus 154 v~G~~aGigl 163 (453)
..|++-=+++
T Consensus 351 Laavli~v~~ 360 (554)
T COG0659 351 LAAVLILVGW 360 (554)
T ss_pred HHHHHHHHHH
Confidence 8876544333
No 47
>TIGR00931 antiport_nhaC Na+/H+ antiporter NhaC. A single member of the NhaC family, a protein from Bacillus firmus, has been functionally characterized.It is involved in pH homeostasis and sodium extrusion. Members of the NhaC family are found in both Gram-negative bacteria and Gram-positive bacteria.
Probab=25.54 E-value=3.5e+02 Score=29.04 Aligned_cols=77 Identities=19% Similarity=0.271 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHhC---CccccchhHHHHHHHHHcCC-----CCCHHHHHHH
Q 037301 54 AMGDLGTYIPIVLALTLAKDLDLGTTLIFTGIYNIVTGAIYG---VPMPVQPMKSIAAVAISNGS-----DFGIPEIMAA 125 (453)
Q Consensus 54 ~l~~l~t~lPl~la~a~~aGlp~~~~l~~~gl~~iv~gl~~~---~Pl~v~p~~a~aa~~i~~~~-----~~~~~~~~~A 125 (453)
|.+..++.-|..++++...|+|+.. ..+.++.|.++| +|++ .++..+...++.. ..-..+.+.+
T Consensus 123 s~gt~~~~g~~l~~i~~~~g~~~~~-----~agai~sGa~fGD~~sP~S---dtt~l~a~~~~~~~~~~v~~~~~~~~~a 194 (454)
T TIGR00931 123 SWGTVGTIGVAMMGIGTGLGIDLAI-----AAGAVVCGAYFGDKLSPLS---DTTNFASGIVGVDLFDHIRHLLYTTVPS 194 (454)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHHcCCCCCCC---cHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4566668888899999999999864 456677788887 4553 2333333333210 0012345556
Q ss_pred HHHHHHHHHHHHH
Q 037301 126 GICTGGILFVLGV 138 (453)
Q Consensus 126 ~ll~G~i~lllGl 138 (453)
.+++.++..++|.
T Consensus 195 ~~i~~v~~~i~g~ 207 (454)
T TIGR00931 195 FVITAILFLVIGR 207 (454)
T ss_pred HHHHHHHHHHHhc
Confidence 6666666666663
No 48
>COG3333 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.62 E-value=9.6e+02 Score=26.02 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=20.6
Q ss_pred HHhhCCHHHHHHHHHH-HHHHHHHHhhhhhhhcc
Q 037301 145 AYKLIPLPVVRGIQLS-QGLSFAMSAVKYIRNVQ 177 (453)
Q Consensus 145 l~~~IP~~Vv~G~~aG-igl~i~~~ql~~~~g~~ 177 (453)
+...--+++++|..++ +|+.+...+++...|++
T Consensus 158 ~~~~~~~s~lK~l~~~~lGl~La~VGiD~~sG~~ 191 (504)
T COG3333 158 VAGLSGGSLLKGLASAALGLLLATVGIDPISGVP 191 (504)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHcCcCccCCCc
Confidence 4455566777777654 46666666666665554
No 49
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.18 E-value=6.8e+02 Score=26.31 Aligned_cols=104 Identities=17% Similarity=0.241 Sum_probs=65.9
Q ss_pred HHHHHHHHHHH-----------HHHHcCCC--hhhHHHHHHHHHHHHHHHhCCccccchhHHHHHHHHHcCC--CCCHHH
Q 037301 57 DLGTYIPIVLA-----------LTLAKDLD--LGTTLIFTGIYNIVTGAIYGVPMPVQPMKSIAAVAISNGS--DFGIPE 121 (453)
Q Consensus 57 ~l~t~lPl~la-----------~a~~aGlp--~~~~l~~~gl~~iv~gl~~~~Pl~v~p~~a~aa~~i~~~~--~~~~~~ 121 (453)
-+...+|+-+- ...++|-+ +.-.+.++|+.++..+.+.+..+.++ ++.+ +++.+. +-+...
T Consensus 223 ~l~lalPL~lvtmasQN~pGiAvLka~gY~pp~~pl~~~TGl~sll~ApfG~~t~nLa---AItA-Aic~gpdaHpD~~r 298 (402)
T COG3135 223 MLSLALPLFLVTMASQNLPGIAVLKAAGYQPPPSPLIVATGLASLLSAPFGGHTVNLA---AITA-AICTGPDAHPDPAR 298 (402)
T ss_pred HHHHhHHHHHHHHHhccCccceeehhcCCCCCCchHHHHhHHHHHHhcccccceecHH---HHHH-HHhcCCCCCCChHH
Confidence 34466777654 22334444 44455588999999888877766433 3332 344432 234555
Q ss_pred HHHHHHHHHHHHHHHHHHhH-HHHHHhhCCHHHHHHHHHHHHHHH
Q 037301 122 IMAAGICTGGILFVLGVTGL-MHLAYKLIPLPVVRGIQLSQGLSF 165 (453)
Q Consensus 122 ~~~A~ll~G~i~lllGl~rl-~~~l~~~IP~~Vv~G~~aGigl~i 165 (453)
=.-+.+++|+.-++.|+++- +--++...|.+.+ .+++|+++.=
T Consensus 299 ry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li-~~lAGLALlg 342 (402)
T COG3135 299 RYTAALVAGIFYLLAGLFGGALVGLMAALPASLI-AALAGLALLG 342 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHH-HHHHHHHHHH
Confidence 56778899999999999873 1224556788776 5788888753
Done!