Query 037315
Match_columns 693
No_of_seqs 680 out of 4731
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 11:00:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037315.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037315hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3E-62 6.4E-67 571.9 42.6 543 17-625 68-611 (968)
2 PLN00113 leucine-rich repeat r 100.0 7.5E-58 1.6E-62 534.9 39.2 532 1-598 76-608 (968)
3 KOG4194 Membrane glycoprotein 100.0 9.2E-45 2E-49 357.9 9.4 401 171-652 80-500 (873)
4 KOG4194 Membrane glycoprotein 100.0 2E-41 4.3E-46 334.4 2.3 373 146-597 79-452 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 4.3E-40 9.4E-45 311.2 -15.1 476 18-597 45-541 (565)
6 KOG0472 Leucine-rich repeat pr 100.0 4E-40 8.7E-45 311.4 -19.6 479 41-621 43-541 (565)
7 KOG0618 Serine/threonine phosp 100.0 1.7E-34 3.8E-39 300.7 -5.6 497 9-594 12-510 (1081)
8 KOG0444 Cytoskeletal regulator 100.0 1.3E-33 2.7E-38 281.3 -4.2 369 194-625 7-379 (1255)
9 KOG0618 Serine/threonine phosp 100.0 1.2E-33 2.5E-38 294.6 -6.1 487 22-597 2-489 (1081)
10 KOG0444 Cytoskeletal regulator 100.0 3.3E-33 7.2E-38 278.3 -4.4 367 97-577 9-379 (1255)
11 PLN03210 Resistant to P. syrin 99.9 2.4E-23 5.2E-28 243.8 27.4 339 165-571 554-904 (1153)
12 KOG4237 Extracellular matrix p 99.9 2.2E-27 4.7E-32 225.1 -5.3 134 168-303 66-200 (498)
13 PLN03210 Resistant to P. syrin 99.9 6E-23 1.3E-27 240.6 26.9 341 187-596 551-905 (1153)
14 KOG4237 Extracellular matrix p 99.9 2.4E-26 5.1E-31 218.1 -4.7 309 223-600 51-362 (498)
15 PRK15387 E3 ubiquitin-protein 99.8 2.3E-20 5E-25 202.5 17.1 112 221-352 204-315 (788)
16 PRK15387 E3 ubiquitin-protein 99.8 9.9E-20 2.2E-24 197.6 17.3 263 196-580 203-465 (788)
17 PRK15370 E3 ubiquitin-protein 99.8 3E-18 6.4E-23 187.6 11.2 55 292-352 242-296 (754)
18 PRK15370 E3 ubiquitin-protein 99.7 4.8E-18 1E-22 186.0 11.5 117 171-304 180-296 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 1.9E-19 4.1E-24 184.0 -3.1 58 222-279 2-63 (319)
20 cd00116 LRR_RI Leucine-rich re 99.7 7.4E-19 1.6E-23 179.6 -0.3 58 198-256 2-64 (319)
21 KOG0617 Ras suppressor protein 99.6 2.8E-18 6E-23 144.7 -4.5 90 355-448 26-115 (264)
22 KOG0617 Ras suppressor protein 99.6 5.7E-18 1.2E-22 142.8 -3.7 182 382-622 28-213 (264)
23 PLN03150 hypothetical protein; 99.5 6.6E-14 1.4E-18 153.3 11.3 118 513-630 419-538 (623)
24 KOG1259 Nischarin, modulator o 99.2 2.1E-12 4.6E-17 119.3 0.7 86 511-599 328-414 (490)
25 KOG3207 Beta-tubulin folding c 99.2 3.4E-12 7.4E-17 124.3 0.5 165 15-208 118-285 (505)
26 KOG1259 Nischarin, modulator o 99.2 8.8E-12 1.9E-16 115.3 1.4 133 384-575 281-414 (490)
27 PF14580 LRR_9: Leucine-rich r 99.1 7.6E-11 1.7E-15 105.3 6.0 80 511-590 63-146 (175)
28 KOG3207 Beta-tubulin folding c 99.1 7.2E-12 1.6E-16 122.1 -0.9 111 143-253 119-232 (505)
29 COG4886 Leucine-rich repeat (L 99.1 1.1E-10 2.4E-15 122.7 7.2 198 319-601 97-294 (394)
30 KOG1909 Ran GTPase-activating 99.1 7.3E-12 1.6E-16 118.8 -1.7 139 290-448 156-311 (382)
31 PF14580 LRR_9: Leucine-rich r 99.1 1.3E-10 2.7E-15 103.9 4.8 109 167-280 17-126 (175)
32 KOG1909 Ran GTPase-activating 99.1 1.6E-11 3.5E-16 116.5 -1.5 175 39-231 26-226 (382)
33 COG4886 Leucine-rich repeat (L 99.1 2.7E-10 5.9E-15 119.7 7.5 102 247-352 97-199 (394)
34 KOG0532 Leucine-rich repeat (L 99.0 5.2E-12 1.1E-16 126.9 -5.5 174 362-598 75-248 (722)
35 KOG0531 Protein phosphatase 1, 99.0 3.7E-11 8E-16 126.3 -0.6 246 267-603 72-324 (414)
36 PLN03150 hypothetical protein; 99.0 5.3E-10 1.2E-14 122.8 8.3 114 436-602 419-533 (623)
37 PF13855 LRR_8: Leucine rich r 99.0 2.8E-10 6E-15 83.4 2.7 59 537-595 2-60 (61)
38 KOG0532 Leucine-rich repeat (L 99.0 2.7E-11 5.7E-16 121.9 -3.8 174 168-352 74-247 (722)
39 PF13855 LRR_8: Leucine rich r 99.0 4.1E-10 8.8E-15 82.5 2.9 61 512-572 1-61 (61)
40 KOG4658 Apoptotic ATPase [Sign 98.9 2.2E-09 4.8E-14 120.4 5.8 127 195-325 524-652 (889)
41 KOG4658 Apoptotic ATPase [Sign 98.8 5E-09 1.1E-13 117.6 6.4 316 120-445 523-856 (889)
42 KOG0531 Protein phosphatase 1, 98.8 8.1E-10 1.8E-14 116.1 -0.5 245 194-453 72-323 (414)
43 KOG2120 SCF ubiquitin ligase, 98.7 4.9E-10 1.1E-14 103.9 -6.2 157 121-277 186-348 (419)
44 KOG2120 SCF ubiquitin ligase, 98.6 1.8E-09 3.9E-14 100.3 -5.5 176 268-446 186-374 (419)
45 KOG1859 Leucine-rich repeat pr 98.5 7.8E-09 1.7E-13 107.3 -1.8 110 510-624 185-295 (1096)
46 KOG1859 Leucine-rich repeat pr 98.4 2.7E-09 5.8E-14 110.7 -8.6 128 387-573 164-292 (1096)
47 KOG2982 Uncharacterized conser 98.4 7E-08 1.5E-12 89.9 0.4 82 361-442 198-286 (418)
48 KOG2982 Uncharacterized conser 98.3 8.5E-08 1.8E-12 89.4 -0.9 82 511-592 198-287 (418)
49 KOG4579 Leucine-rich repeat (L 98.2 7.6E-08 1.7E-12 79.1 -3.6 87 513-602 78-164 (177)
50 KOG4341 F-box protein containi 98.2 3.9E-08 8.5E-13 96.0 -6.5 156 191-346 291-459 (483)
51 COG5238 RNA1 Ran GTPase-activa 98.1 6.4E-07 1.4E-11 82.5 0.8 69 16-85 28-109 (388)
52 KOG4341 F-box protein containi 98.1 8.6E-08 1.9E-12 93.7 -5.8 236 117-352 187-439 (483)
53 COG5238 RNA1 Ran GTPase-activa 98.0 9E-07 2E-11 81.6 0.0 87 242-328 213-316 (388)
54 PF12799 LRR_4: Leucine Rich r 98.0 4.2E-06 9E-11 55.8 3.0 37 18-56 1-37 (44)
55 KOG1644 U2-associated snRNP A' 98.0 1.4E-05 2.9E-10 70.9 5.9 124 172-300 22-149 (233)
56 PF12799 LRR_4: Leucine Rich r 97.9 6.5E-06 1.4E-10 54.9 2.5 36 537-573 2-37 (44)
57 KOG4579 Leucine-rich repeat (L 97.9 8.5E-07 1.8E-11 73.1 -3.0 87 167-257 51-137 (177)
58 PRK15386 type III secretion pr 97.8 5.6E-05 1.2E-09 76.4 7.5 54 386-445 51-104 (426)
59 PF13306 LRR_5: Leucine rich r 97.8 6.8E-05 1.5E-09 64.7 6.9 122 213-341 7-128 (129)
60 KOG1644 U2-associated snRNP A' 97.8 4.9E-05 1.1E-09 67.5 5.7 104 244-349 43-150 (233)
61 KOG3665 ZYG-1-like serine/thre 97.7 1.2E-05 2.7E-10 88.3 2.2 16 242-257 249-264 (699)
62 PF13306 LRR_5: Leucine rich r 97.7 8.7E-05 1.9E-09 64.1 7.0 63 380-444 5-67 (129)
63 PRK15386 type III secretion pr 97.6 0.0002 4.3E-09 72.5 8.5 43 407-453 48-90 (426)
64 KOG3665 ZYG-1-like serine/thre 97.5 3.3E-05 7.1E-10 85.0 1.1 135 68-209 122-265 (699)
65 KOG1947 Leucine rich repeat pr 97.3 1.8E-05 3.9E-10 86.0 -4.2 36 389-424 403-440 (482)
66 KOG2739 Leucine-rich acidic nu 97.2 0.00024 5.3E-09 66.1 3.3 68 10-81 35-104 (260)
67 KOG1947 Leucine rich repeat pr 96.7 0.00017 3.7E-09 78.3 -3.2 177 117-303 185-374 (482)
68 KOG2123 Uncharacterized conser 96.7 0.00011 2.4E-09 68.4 -3.9 78 511-590 40-123 (388)
69 KOG2739 Leucine-rich acidic nu 96.6 0.0014 2.9E-08 61.2 2.5 69 13-82 60-130 (260)
70 KOG2123 Uncharacterized conser 96.3 0.00023 4.9E-09 66.4 -4.3 87 511-601 18-105 (388)
71 PF00560 LRR_1: Leucine Rich R 95.3 0.005 1.1E-07 33.9 0.1 21 19-41 1-21 (22)
72 PF00560 LRR_1: Leucine Rich R 94.8 0.0098 2.1E-07 32.7 0.3 11 563-573 3-13 (22)
73 PF13504 LRR_7: Leucine rich r 94.5 0.022 4.7E-07 29.0 1.2 14 18-31 1-14 (17)
74 smart00370 LRR Leucine-rich re 93.6 0.061 1.3E-06 31.0 2.1 22 17-39 1-22 (26)
75 smart00369 LRR_TYP Leucine-ric 93.6 0.061 1.3E-06 31.0 2.1 22 17-39 1-22 (26)
76 smart00369 LRR_TYP Leucine-ric 92.6 0.094 2E-06 30.2 1.9 18 537-554 3-20 (26)
77 smart00370 LRR Leucine-rich re 92.6 0.094 2E-06 30.2 1.9 18 537-554 3-20 (26)
78 KOG4308 LRR-containing protein 92.3 0.001 2.2E-08 70.2 -11.7 87 266-352 203-303 (478)
79 KOG4308 LRR-containing protein 91.9 0.00075 1.6E-08 71.2 -13.3 195 45-257 89-304 (478)
80 KOG3864 Uncharacterized conser 89.6 0.055 1.2E-06 48.7 -1.7 84 513-596 102-188 (221)
81 TIGR00864 PCC polycystin catio 89.3 0.26 5.6E-06 61.5 3.0 36 566-601 1-36 (2740)
82 KOG0473 Leucine-rich repeat pr 89.0 0.015 3.1E-07 53.3 -5.8 84 511-597 41-124 (326)
83 KOG3864 Uncharacterized conser 87.3 0.042 9.1E-07 49.4 -3.9 81 147-227 103-185 (221)
84 PF13516 LRR_6: Leucine Rich r 85.4 0.13 2.9E-06 28.8 -1.2 13 561-573 3-15 (24)
85 KOG0473 Leucine-rich repeat pr 84.7 0.028 6.2E-07 51.4 -6.3 90 529-621 35-124 (326)
86 smart00365 LRR_SD22 Leucine-ri 84.3 0.93 2E-05 26.0 1.9 15 17-31 1-15 (26)
87 TIGR00864 PCC polycystin catio 78.9 0.94 2E-05 56.8 1.4 58 590-647 1-77 (2740)
88 smart00364 LRR_BAC Leucine-ric 76.0 2 4.3E-05 24.6 1.5 18 18-36 2-19 (26)
89 smart00368 LRR_RI Leucine rich 70.9 3.7 8.1E-05 24.0 1.9 13 19-31 3-15 (28)
90 KOG4242 Predicted myosin-I-bin 70.7 14 0.0003 38.4 6.9 17 44-60 215-231 (553)
91 PHA03099 epidermal growth fact 65.0 3.6 7.7E-05 33.8 1.3 33 658-690 105-137 (139)
92 KOG4242 Predicted myosin-I-bin 61.3 37 0.00081 35.4 7.9 19 220-238 216-234 (553)
93 KOG3763 mRNA export factor TAP 60.4 3.9 8.4E-05 43.1 0.9 61 511-573 217-283 (585)
94 KOG3763 mRNA export factor TAP 53.7 5.9 0.00013 41.8 1.0 60 16-81 216-283 (585)
95 PF15102 TMEM154: TMEM154 prot 50.3 8.5 0.00019 32.9 1.2 16 666-681 72-87 (146)
96 smart00367 LRR_CC Leucine-rich 45.8 15 0.00032 20.9 1.4 13 42-54 1-13 (26)
97 PTZ00382 Variant-specific surf 38.3 35 0.00076 27.2 3.0 19 656-674 69-87 (96)
98 PF15050 SCIMP: SCIMP protein 31.1 14 0.00031 30.0 -0.3 30 654-683 8-37 (133)
99 PF02009 Rifin_STEVOR: Rifin/s 26.9 19 0.00041 35.6 -0.3 16 663-678 266-281 (299)
100 PF04478 Mid2: Mid2 like cell 25.2 34 0.00073 29.6 0.9 9 654-662 50-58 (154)
101 smart00082 LRRCT Leucine rich 24.9 35 0.00077 23.0 0.8 10 618-627 1-10 (51)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3e-62 Score=571.94 Aligned_cols=543 Identities=33% Similarity=0.494 Sum_probs=499.0
Q ss_pred CCCCCEEECCCCCCCCcCCccccCCCCCCCEEECCCCcCcCcCCcccccCCCCCcEEEccCCccccccccccCCCCCCcc
Q 037315 17 MTSLRILDVSSNQLTGSISSSPLFYLTSIEELSLSNNHFHIPISLEPLFNHSRLKIFYADNNPINAKITKSHTLTTPKFQ 96 (693)
Q Consensus 17 l~~L~~L~Ls~n~l~~~l~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~ 96 (693)
..+++.|||++|.+++.++. .+..+++|++|+|++|++.+.+|...+..+++|++|++++|.+++..+.. ...+
T Consensus 68 ~~~v~~L~L~~~~i~~~~~~-~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~-----~l~~ 141 (968)
T PLN00113 68 SSRVVSIDLSGKNISGKISS-AIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG-----SIPN 141 (968)
T ss_pred CCcEEEEEecCCCccccCCh-HHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCcc-----ccCC
Confidence 35799999999999877776 89999999999999999988888666668999999999999988765542 2348
Q ss_pred ccEEecCCCCCCCCcCchhhcCCCCCCEEEccCccccccCchhhhhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEc
Q 037315 97 LASLSLSSSYGDGVTFPKFLYYQHDLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDSLAGPFRLPIHSHRHLRLLDV 176 (693)
Q Consensus 97 L~~L~L~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l 176 (693)
|++|++ +.+.+.+..|..++.+++|++|++++|.+.+.+|..+ +++++|++|++++|.+.+..+..++.+++|++|++
T Consensus 142 L~~L~L-s~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 219 (968)
T PLN00113 142 LETLDL-SNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL-TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYL 219 (968)
T ss_pred CCEEEC-cCCcccccCChHHhcCCCCCEEECccCcccccCChhh-hhCcCCCeeeccCCCCcCcCChHHcCcCCccEEEC
Confidence 999999 8888888899999999999999999999998888876 79999999999999999888999999999999999
Q ss_pred cCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEccccccc
Q 037315 177 SNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLK 256 (693)
Q Consensus 177 ~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 256 (693)
++|.+++.+|..+.. +++|++|++++|.+.+..|..++++++|++|++++|.+.+.+|..+. .+++|++|++++|.+.
T Consensus 220 ~~n~l~~~~p~~l~~-l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~l~ 297 (968)
T PLN00113 220 GYNNLSGEIPYEIGG-LTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIF-SLQKLISLDLSDNSLS 297 (968)
T ss_pred cCCccCCcCChhHhc-CCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHh-hccCcCEEECcCCeec
Confidence 999999889988876 89999999999999999999999999999999999999888888776 5999999999999999
Q ss_pred cccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccccCcccccc
Q 037315 257 GHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFC 336 (693)
Q Consensus 257 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~ 336 (693)
+..|..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.+.+..|..++.+++|+.|++++|.+.+..|..+.
T Consensus 298 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~ 377 (968)
T PLN00113 298 GEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC 377 (968)
T ss_pred cCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh
Confidence 98899899999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred CCCCCCEEECcCCcCCCCCCCCCC-CCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCCcchhhhCCCCCCE
Q 037315 337 HLYSLQILDISDNNISGSLPSCFH-PLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGSIPDWIDGLSQLSH 415 (693)
Q Consensus 337 ~l~~L~~L~l~~n~~~~~~~~~~~-~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 415 (693)
.+++|+.|++++|.+.+..|..+. +++|+.|++++|++.+.++. .+..+++|+.|++++|.+.+..+..+..+++|+.
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 456 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPS-EFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQM 456 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECCh-hHhcCCCCCEEECcCCcccCccChhhccCCCCcE
Confidence 999999999999999988887654 78999999999999888876 7899999999999999999999988999999999
Q ss_pred EEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCccccccccee
Q 037315 416 LILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQEFF 495 (693)
Q Consensus 416 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (693)
|++++|++.+..|..+ ..++|+.|++++|++.+..|..+..
T Consensus 457 L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~-------------------------------------- 497 (968)
T PLN00113 457 LSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGS-------------------------------------- 497 (968)
T ss_pred EECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhh--------------------------------------
Confidence 9999999998888765 4689999999999999888877655
Q ss_pred eeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCcccccc
Q 037315 496 EFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGK 575 (693)
Q Consensus 496 ~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 575 (693)
+++|+.|++++|.+.+.+|..+..+++|++|+|++|.+++.+|..|.++++|+.|||++|++++.
T Consensus 498 ---------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 562 (968)
T PLN00113 498 ---------------LSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGE 562 (968)
T ss_pred ---------------hhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCccccc
Confidence 55899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCEEecCCCcCcccCCCCccccCcCCcccccCccCCCCCC
Q 037315 576 IPHQLVELKELAVFSVAYNNLSGEIPEWKAQFATFNENSYEGNTFLCGLP 625 (693)
Q Consensus 576 ~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~~~~n~~~c~~~ 625 (693)
+|..+..+++|+++++++|++.+.+|.. +++..+....+.|||.+|+.+
T Consensus 563 ~p~~l~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~ 611 (968)
T PLN00113 563 IPKNLGNVESLVQVNISHNHLHGSLPST-GAFLAINASAVAGNIDLCGGD 611 (968)
T ss_pred CChhHhcCcccCEEeccCCcceeeCCCc-chhcccChhhhcCCccccCCc
Confidence 9999999999999999999999999985 788888999999999999753
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.5e-58 Score=534.86 Aligned_cols=532 Identities=32% Similarity=0.440 Sum_probs=482.8
Q ss_pred CCCCCCccCcchhccCCCCCCEEECCCCCCCCcCCccccCCCCCCCEEECCCCcCcCcCCcccccCCCCCcEEEccCCcc
Q 037315 1 MADNELRGSLPWCLANMTSLRILDVSSNQLTGSISSSPLFYLTSIEELSLSNNHFHIPISLEPLFNHSRLKIFYADNNPI 80 (693)
Q Consensus 1 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~l~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~~ 80 (693)
|+.|++++.+|.+|..+++|++|||++|++++.+|...+..+++|++|+|++|.+++.+|. ..+++|++|++++|.+
T Consensus 76 L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L~Ls~n~~ 152 (968)
T PLN00113 76 LSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR---GSIPNLETLDLSNNML 152 (968)
T ss_pred ecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc---cccCCCCEEECcCCcc
Confidence 5788999999999999999999999999999889985566999999999999999887773 4689999999999999
Q ss_pred ccccccccCCCCCCccccEEecCCCCCCCCcCchhhcCCCCCCEEEccCccccccCchhhhhcCCCCCEEEccCCccccc
Q 037315 81 NAKITKSHTLTTPKFQLASLSLSSSYGDGVTFPKFLYYQHDLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDSLAGP 160 (693)
Q Consensus 81 ~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 160 (693)
.+..+..+. ...+|++|++ +.+.+.+.+|..++.+++|++|++++|.+.+.+|..+ +++++|++|++++|.+.+.
T Consensus 153 ~~~~p~~~~---~l~~L~~L~L-~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~L~~n~l~~~ 227 (968)
T PLN00113 153 SGEIPNDIG---SFSSLKVLDL-GGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPREL-GQMKSLKWIYLGYNNLSGE 227 (968)
T ss_pred cccCChHHh---cCCCCCEEEC-ccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHH-cCcCCccEEECcCCccCCc
Confidence 877665543 2349999999 8888888899999999999999999999999888876 8999999999999999998
Q ss_pred CCCCCCCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhh
Q 037315 161 FRLPIHSHRHLRLLDVSNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAM 240 (693)
Q Consensus 161 ~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 240 (693)
.+..++.+++|++|++++|.+++.+|..+.. +++|++|++++|.+.+..|..+.++++|++|++++|.+.+.+|..+.
T Consensus 228 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~- 305 (968)
T PLN00113 228 IPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN-LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVI- 305 (968)
T ss_pred CChhHhcCCCCCEEECcCceeccccChhHhC-CCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHc-
Confidence 9999999999999999999999888888776 89999999999999999999999999999999999999988887665
Q ss_pred CCCCCcEEEccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEE
Q 037315 241 GCVNLEFLALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHI 320 (693)
Q Consensus 241 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L 320 (693)
.+++|++|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+..+++|+.|
T Consensus 306 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L 385 (968)
T PLN00113 306 QLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKL 385 (968)
T ss_pred CCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEE
Confidence 69999999999999999899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCccccCccccccCCCCCCEEECcCCcCCCCCCCCCC-CCcccEEEccCcccccccCcccccCCCCCcEEeCcCccc
Q 037315 321 IMPKNHLEGPIPVEFCHLYSLQILDISDNNISGSLPSCFH-PLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLL 399 (693)
Q Consensus 321 ~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~-~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i 399 (693)
++++|.+.+..|..+..+++|+.|++++|++.+..|..+. .+.|+.+++++|.+.+.++. .+..+++|+.|++++|.+
T Consensus 386 ~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~n~~ 464 (968)
T PLN00113 386 ILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINS-RKWDMPSLQMLSLARNKF 464 (968)
T ss_pred ECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccCh-hhccCCCCcEEECcCcee
Confidence 9999999999999999999999999999999988887664 78999999999999888776 677899999999999999
Q ss_pred CCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhh
Q 037315 400 NGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFS 479 (693)
Q Consensus 400 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 479 (693)
.+..|..+ ..++|+.|++++|++++..|..+.++++|+.|++++|++.+.+|..+..
T Consensus 465 ~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---------------------- 521 (968)
T PLN00113 465 FGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSS---------------------- 521 (968)
T ss_pred eeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcC----------------------
Confidence 98888765 4689999999999999999999999999999999999999998887765
Q ss_pred hcccCCcccccccceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCC
Q 037315 480 IKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNL 559 (693)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 559 (693)
+++|++|++++|.+++.+|..+..+++|+.|+|++|++++.+|..+.++
T Consensus 522 -------------------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 570 (968)
T PLN00113 522 -------------------------------CKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNV 570 (968)
T ss_pred -------------------------------ccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcC
Confidence 5589999999999999999999999999999999999999999999999
Q ss_pred CCCCEEeCCCccccccCCcccccCCCCCEEecCCCcCcc
Q 037315 560 KQIESLDLSYNKLNGKIPHQLVELKELAVFSVAYNNLSG 598 (693)
Q Consensus 560 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 598 (693)
++|+.|++++|++.+.+|.. .....+....+.+|+..|
T Consensus 571 ~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc 608 (968)
T PLN00113 571 ESLVQVNISHNHLHGSLPST-GAFLAINASAVAGNIDLC 608 (968)
T ss_pred cccCEEeccCCcceeeCCCc-chhcccChhhhcCCcccc
Confidence 99999999999999988864 333445555667777544
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-45 Score=357.89 Aligned_cols=401 Identities=26% Similarity=0.311 Sum_probs=288.8
Q ss_pred CCEEEccCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEc
Q 037315 171 LRLLDVSNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLAL 250 (693)
Q Consensus 171 L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l 250 (693)
-+.||+++|++. .+....+..+|+|+++++.+|.++ .+|.......+|+.|+|.+|.|. .+.....+.++.|+.|||
T Consensus 80 t~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~-sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 80 TQTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLIS-SVTSEELSALPALRSLDL 156 (873)
T ss_pred eeeeeccccccc-cCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccc-cccHHHHHhHhhhhhhhh
Confidence 344555555555 333333444555555555555555 44443333444555555555555 343333334555555555
Q ss_pred cccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccccC
Q 037315 251 SNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGP 330 (693)
Q Consensus 251 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~ 330 (693)
|.|.|+.+....|..-.++++|+|++|.|+......|..+.+|..|.|+.|.++...+..|.++++|+.|++..|++...
T Consensus 157 SrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iriv 236 (873)
T KOG4194|consen 157 SRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIV 236 (873)
T ss_pred hhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeee
Confidence 55555555444555445555555555555554445555555555555555555544444555555555555555555433
Q ss_pred ccccccCCCCCCEEECcCCcCCCCCCCCCCCCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCCcchhhhCC
Q 037315 331 IPVEFCHLYSLQILDISDNNISGSLPSCFHPLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGSIPDWIDGL 410 (693)
Q Consensus 331 ~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l 410 (693)
.--.|.++++|+.|.+..|.+. .+.+++|..+.++++|+|+.|++...-.+|+.++
T Consensus 237 e~ltFqgL~Sl~nlklqrN~I~------------------------kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgL 292 (873)
T KOG4194|consen 237 EGLTFQGLPSLQNLKLQRNDIS------------------------KLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGL 292 (873)
T ss_pred hhhhhcCchhhhhhhhhhcCcc------------------------cccCcceeeecccceeecccchhhhhhccccccc
Confidence 2334555555555555555543 4555689999999999999999998888899999
Q ss_pred CCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCccccc
Q 037315 411 SQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKK 490 (693)
Q Consensus 411 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (693)
+.|+.|+++.|.|..+.+++...+++|++|+|+.|+++...+..|..
T Consensus 293 t~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~--------------------------------- 339 (873)
T KOG4194|consen 293 TSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRV--------------------------------- 339 (873)
T ss_pred chhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHH---------------------------------
Confidence 99999999999999888888899999999999999999888877755
Q ss_pred ccceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCc---ccccCCCCCCEEeC
Q 037315 491 IQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIP---STFSNLKQIESLDL 567 (693)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~~~l~~L~~L~L 567 (693)
+..|++|+|++|.+..+....|..+++|++|||++|.++..+. ..|.++++|+.|++
T Consensus 340 --------------------L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l 399 (873)
T KOG4194|consen 340 --------------------LSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRL 399 (873)
T ss_pred --------------------HHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheee
Confidence 5589999999999998888889999999999999999987764 46889999999999
Q ss_pred CCccccccCCcccccCCCCCEEecCCCcCcccCCCCccccCcCCcccccCccCCCCCCCC-----------------CCC
Q 037315 568 SYNKLNGKIPHQLVELKELAVFSVAYNNLSGEIPEWKAQFATFNENSYEGNTFLCGLPLP-----------------ICR 630 (693)
Q Consensus 568 s~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~~~~n~~~c~~~~~-----------------~c~ 630 (693)
.+|++..+...+|.+++.|+.|||.+|.+...-|+.|.++ .++++.+..-.++|+|.+. .|.
T Consensus 400 ~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql~Wl~qWl~~~~lq~sv~a~Ca 478 (873)
T KOG4194|consen 400 TGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQLKWLAQWLYRRKLQSSVIAKCA 478 (873)
T ss_pred cCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEeccHHHHHHHHHhcccccceeeecc
Confidence 9999998888899999999999999999999889888887 8889989889999999874 399
Q ss_pred CCCCCCccccccccCCCCCCcc
Q 037315 631 SPTTMSEASIENERDDNLIDTD 652 (693)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~ 652 (693)
.|+...+.++...+...+.+.+
T Consensus 479 yPe~Lad~~i~svd~~~lvC~D 500 (873)
T KOG4194|consen 479 YPEPLADQSIVSVDTANLVCDD 500 (873)
T ss_pred CCcccccceeEeechhhceecC
Confidence 9999988887777666654433
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=334.41 Aligned_cols=373 Identities=23% Similarity=0.255 Sum_probs=242.7
Q ss_pred CCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEc
Q 037315 146 KLRQLSLVNDSLAGPFRLPIHSHRHLRLLDVSNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDL 225 (693)
Q Consensus 146 ~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 225 (693)
.-++|++++|.+.......+.++++|+++.+.+|.++ .+|..... ..+++.|+|.+|.|+.+..+.++.++.|++|||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~-sghl~~L~L~~N~I~sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHE-SGHLEKLDLRHNLISSVTSEELSALPALRSLDL 156 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccccccc-ccceeEEeeeccccccccHHHHHhHhhhhhhhh
Confidence 3466888888777766667778888888888888887 67765443 557888888888888777777888888888888
Q ss_pred ccCccccccchHHhhCCCCCcEEEccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccc
Q 037315 226 SNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSG 305 (693)
Q Consensus 226 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~ 305 (693)
+.|.|+ ++|...|..-.++++|+|++|+|+......|.++.+|..|.|++|+++...+..|..+++|+.|+|..|.|..
T Consensus 157 SrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iri 235 (873)
T KOG4194|consen 157 SRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRI 235 (873)
T ss_pred hhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceee
Confidence 888887 7776666555678888888888888777888888888888888888886666677778888888888888764
Q ss_pred cCCccccCCCCCcEEEccCCccccCccccccCCCCCCEEECcCCcCCCCCCCC-CCCCcccEEEccCcccccccCccccc
Q 037315 306 KIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSLQILDISDNNISGSLPSC-FHPLSITQVHLSKNMLHGQLKGGTFF 384 (693)
Q Consensus 306 ~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~-~~~~~L~~L~l~~n~~~~~~~~~~~~ 384 (693)
.--..|.++++|+.|.+..|.+.....++|..+.++++|+++.|++.....+. |.+.+|+.|+++.|.+...-.. .+.
T Consensus 236 ve~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d-~Ws 314 (873)
T KOG4194|consen 236 VEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHID-SWS 314 (873)
T ss_pred ehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecc-hhh
Confidence 44566788888888888888888777777888888888888888876443321 2233444444444444222222 444
Q ss_pred CCCCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCcccccc
Q 037315 385 NCSSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESY 464 (693)
Q Consensus 385 ~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~ 464 (693)
.+++|++|+|++|.|+...++.|..+..|++|+|+.|+++..-..+|.++++|++|||++|.++..+.+.
T Consensus 315 ftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDa---------- 384 (873)
T KOG4194|consen 315 FTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDA---------- 384 (873)
T ss_pred hcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecc----------
Confidence 4555555555555555444455555555555555555555444444555555555555555444332221
Q ss_pred CCCCCCchhhhHhhhhcccCCcccccccceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCC
Q 037315 465 NNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLS 544 (693)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 544 (693)
...|.++++|+.|++.
T Consensus 385 ----------------------------------------------------------------a~~f~gl~~LrkL~l~ 400 (873)
T KOG4194|consen 385 ----------------------------------------------------------------AVAFNGLPSLRKLRLT 400 (873)
T ss_pred ----------------------------------------------------------------hhhhccchhhhheeec
Confidence 1235555566666666
Q ss_pred CccCCccCcccccCCCCCCEEeCCCccccccCCcccccCCCCCEEecCCCcCc
Q 037315 545 HNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVFSVAYNNLS 597 (693)
Q Consensus 545 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 597 (693)
+|++..+...+|.++.+||+|||.+|.|..+-|++|..+ .|+.|-+..-.+.
T Consensus 401 gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssfl 452 (873)
T KOG4194|consen 401 GNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFL 452 (873)
T ss_pred CceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceE
Confidence 666655555556666666666666666655555555555 5555554443333
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4.3e-40 Score=311.16 Aligned_cols=476 Identities=26% Similarity=0.370 Sum_probs=258.7
Q ss_pred CCCCEEECCCCCCCCcCCccccCCCCCCCEEECCCCcCcCcCCcccccCCCCCcEEEccCCccccccccccCCCCCCccc
Q 037315 18 TSLRILDVSSNQLTGSISSSPLFYLTSIEELSLSNNHFHIPISLEPLFNHSRLKIFYADNNPINAKITKSHTLTTPKFQL 97 (693)
Q Consensus 18 ~~L~~L~Ls~n~l~~~l~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~L 97 (693)
.-|+.|++++|.+. .+.+ .+.++..|.+|++++|++. ..| .+++.+..++.++.+.|.+..
T Consensus 45 v~l~~lils~N~l~-~l~~-dl~nL~~l~vl~~~~n~l~-~lp-~aig~l~~l~~l~vs~n~ls~--------------- 105 (565)
T KOG0472|consen 45 VDLQKLILSHNDLE-VLRE-DLKNLACLTVLNVHDNKLS-QLP-AAIGELEALKSLNVSHNKLSE--------------- 105 (565)
T ss_pred cchhhhhhccCchh-hccH-hhhcccceeEEEeccchhh-hCC-HHHHHHHHHHHhhcccchHhh---------------
Confidence 34555666666665 4444 4556666666666666654 334 245556666666665555431
Q ss_pred cEEecCCCCCCCCcCchhhcCCCCCCEEEccCccccccCchhhhhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEcc
Q 037315 98 ASLSLSSSYGDGVTFPKFLYYQHDLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDSLAGPFRLPIHSHRHLRLLDVS 177 (693)
Q Consensus 98 ~~L~L~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~ 177 (693)
+|..++...++++++.++|.+. ++++.+ +.+..++.++..+|++. ..|..+..+.++..+++.
T Consensus 106 --------------lp~~i~s~~~l~~l~~s~n~~~-el~~~i-~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~ 168 (565)
T KOG0472|consen 106 --------------LPEQIGSLISLVKLDCSSNELK-ELPDSI-GRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLE 168 (565)
T ss_pred --------------ccHHHhhhhhhhhhhcccccee-ecCchH-HHHhhhhhhhccccccc-cCchHHHHHHHHHHhhcc
Confidence 2333333444444444444443 222232 34445555555555544 233444445555555555
Q ss_pred CCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEcccccccc
Q 037315 178 NNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKG 257 (693)
Q Consensus 178 ~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 257 (693)
+|+++ ..|..... ++.|++|+...|.++ .+|..++.+.+|..|++.+|++. .+|+ |.+|..|++++++.|++.-
T Consensus 169 ~n~l~-~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lPe--f~gcs~L~Elh~g~N~i~~ 242 (565)
T KOG0472|consen 169 GNKLK-ALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLPE--FPGCSLLKELHVGENQIEM 242 (565)
T ss_pred ccchh-hCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCCC--CCccHHHHHHHhcccHHHh
Confidence 55555 34443333 445555555555544 44445555555555555555555 4442 2235555555555555554
Q ss_pred ccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccccCccccccC
Q 037315 258 HMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCH 337 (693)
Q Consensus 258 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~ 337 (693)
...+...+++++..||+++|++. ..|+.+..+.+|+.||+++|.++ ..|..++++ +|+.|.+.+|.+..+-.+.+..
T Consensus 243 lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~ 319 (565)
T KOG0472|consen 243 LPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISK 319 (565)
T ss_pred hHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcc
Confidence 43333445555555555555555 44555555555555555555555 345555555 5555555555433211100000
Q ss_pred CC--CCCEE-------ECcCC---------cCCCCCCCCCCCCcccEEEccCcccccccCcccccCCC--CCcEEeCcCc
Q 037315 338 LY--SLQIL-------DISDN---------NISGSLPSCFHPLSITQVHLSKNMLHGQLKGGTFFNCS--SLVTLDLSYN 397 (693)
Q Consensus 338 l~--~L~~L-------~l~~n---------~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~--~L~~L~L~~n 397 (693)
-+ -|++| .++.. ...+..+......+.+.|++++-+++ .+|...|..-. -....+++.|
T Consensus 320 gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskN 398 (565)
T KOG0472|consen 320 GTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKN 398 (565)
T ss_pred cHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccc
Confidence 00 00000 00000 01112222233445566666666653 44443443322 2567777777
Q ss_pred ccCCCcchhhhCCCCCCE-EEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhH
Q 037315 398 LLNGSIPDWIDGLSQLSH-LILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKI 476 (693)
Q Consensus 398 ~i~~~~~~~~~~l~~L~~-L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 476 (693)
++. .+|..+..+..+.+ +.+++|.+. .+|..++.+++|..|++++|.+...+ ..+..
T Consensus 399 qL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln~LP-~e~~~------------------- 456 (565)
T KOG0472|consen 399 QLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLNDLP-EEMGS------------------- 456 (565)
T ss_pred hHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhhhcc-hhhhh-------------------
Confidence 776 55665555554433 344444444 66777777777777777777665432 22222
Q ss_pred hhhhcccCCcccccccceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccc
Q 037315 477 LFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTF 556 (693)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 556 (693)
+..|+.||+++|++. ..|..+..+..++.+-.++|++..+.|+.+
T Consensus 457 ----------------------------------lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l 501 (565)
T KOG0472|consen 457 ----------------------------------LVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGL 501 (565)
T ss_pred ----------------------------------hhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHh
Confidence 335778888888776 677777777777777777788888877888
Q ss_pred cCCCCCCEEeCCCccccccCCcccccCCCCCEEecCCCcCc
Q 037315 557 SNLKQIESLDLSYNKLNGKIPHQLVELKELAVFSVAYNNLS 597 (693)
Q Consensus 557 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 597 (693)
.++.+|.+|||.+|.+. .+|..++++++|++|++++|++.
T Consensus 502 ~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 502 KNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 88888888888888887 66777888888888888888887
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4e-40 Score=311.37 Aligned_cols=479 Identities=24% Similarity=0.322 Sum_probs=372.3
Q ss_pred CCCCCCEEECCCCcCcCcCCcccccCCCCCcEEEccCCccccccccccCCCCCCccccEEecCCCCCCCCcCchhhcCCC
Q 037315 41 YLTSIEELSLSNNHFHIPISLEPLFNHSRLKIFYADNNPINAKITKSHTLTTPKFQLASLSLSSSYGDGVTFPKFLYYQH 120 (693)
Q Consensus 41 ~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~l~~~~ 120 (693)
.-.-|+.|++++|.+.... ..+.++..|.+|+++.|.+. ..|..++.+.
T Consensus 43 ~qv~l~~lils~N~l~~l~--~dl~nL~~l~vl~~~~n~l~-----------------------------~lp~aig~l~ 91 (565)
T KOG0472|consen 43 EQVDLQKLILSHNDLEVLR--EDLKNLACLTVLNVHDNKLS-----------------------------QLPAAIGELE 91 (565)
T ss_pred hhcchhhhhhccCchhhcc--HhhhcccceeEEEeccchhh-----------------------------hCCHHHHHHH
Confidence 3466999999999986433 47889999999999888764 2456677788
Q ss_pred CCCEEEccCccccccCchhhhhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcCcccCChhhhhcCCCCcEEE
Q 037315 121 DLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDSLAGPFRLPIHSHRHLRLLDVSNNNFQGHIPVEIGDILPRLISFN 200 (693)
Q Consensus 121 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~ 200 (693)
.++.++.+.|++. .+|+.+ +.+.++++++++.|.+. ..+..++.+..++.++..+|+++ ..|.+++. +.++..++
T Consensus 92 ~l~~l~vs~n~ls-~lp~~i-~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~-~~~l~~l~ 166 (565)
T KOG0472|consen 92 ALKSLNVSHNKLS-ELPEQI-GSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVN-LSKLSKLD 166 (565)
T ss_pred HHHHhhcccchHh-hccHHH-hhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHH-HHHHHHhh
Confidence 8889999999886 677776 78899999999999987 45677888899999999999998 88988887 67999999
Q ss_pred ccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEccccccccccCccCCCCCCCCeEeccCcccc
Q 037315 201 ISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGHMFSRNFNLINLRWLQLEGNHFV 280 (693)
Q Consensus 201 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 280 (693)
+.+|.+....|..+ +++.|++||...|-+. .+|+.+. ++.+|.-|++.+|++... | .|.++..|++|++..|.+.
T Consensus 167 ~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-tlP~~lg-~l~~L~~LyL~~Nki~~l-P-ef~gcs~L~Elh~g~N~i~ 241 (565)
T KOG0472|consen 167 LEGNKLKALPENHI-AMKRLKHLDCNSNLLE-TLPPELG-GLESLELLYLRRNKIRFL-P-EFPGCSLLKELHVGENQIE 241 (565)
T ss_pred ccccchhhCCHHHH-HHHHHHhcccchhhhh-cCChhhc-chhhhHHHHhhhcccccC-C-CCCccHHHHHHHhcccHHH
Confidence 99999996555544 4999999999999988 9999887 599999999999999874 3 8899999999999999998
Q ss_pred ccCCc-CCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccccCccccccCCCCCCEEECcCCcCCCCCCCCC
Q 037315 281 GEIPQ-SLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSLQILDISDNNISGSLPSCF 359 (693)
Q Consensus 281 ~~~~~-~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 359 (693)
.+|. ...+++++..||+.+|++. ..|..+.-+++|.+||+++|.++ ..|..++++ .|+.|-+.+|.+...-....
T Consensus 242 -~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii 317 (565)
T KOG0472|consen 242 -MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREII 317 (565)
T ss_pred -hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHH
Confidence 5554 4558999999999999998 78888999999999999999998 567789999 99999999998753221111
Q ss_pred CCC---cccEEE-------ccCcccc----cccCcc---cccCCCCCcEEeCcCcccCCCcchhhhCC--CCCCEEEccC
Q 037315 360 HPL---SITQVH-------LSKNMLH----GQLKGG---TFFNCSSLVTLDLSYNLLNGSIPDWIDGL--SQLSHLILGN 420 (693)
Q Consensus 360 ~~~---~L~~L~-------l~~n~~~----~~~~~~---~~~~~~~L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~L~~ 420 (693)
... -|++|. ++...-. ...+.. ......+.+.|++++-+++....+.|..- .-.+..++++
T Consensus 318 ~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~Vnfsk 397 (565)
T KOG0472|consen 318 SKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSK 397 (565)
T ss_pred cccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEeccc
Confidence 110 011110 0000000 000111 22234567788888888774333333322 2267788888
Q ss_pred CcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCcccccccceeeeecc
Q 037315 421 NNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTK 500 (693)
Q Consensus 421 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (693)
|++. ..|..+..+..+.+.-+..|++.+.+|..+..
T Consensus 398 NqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~------------------------------------------- 433 (565)
T KOG0472|consen 398 NQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQ------------------------------------------- 433 (565)
T ss_pred chHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHh-------------------------------------------
Confidence 8887 56766666665554333333333344433322
Q ss_pred cceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCccc
Q 037315 501 NIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQL 580 (693)
Q Consensus 501 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 580 (693)
+++|..|+|++|.+. .+|..++.+..||.|++++|++.. .|..+..+..+|.+-.++|++....|..+
T Consensus 434 ----------l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~-lP~~~y~lq~lEtllas~nqi~~vd~~~l 501 (565)
T KOG0472|consen 434 ----------LQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRM-LPECLYELQTLETLLASNNQIGSVDPSGL 501 (565)
T ss_pred ----------hhcceeeecccchhh-hcchhhhhhhhhheeccccccccc-chHHHhhHHHHHHHHhccccccccChHHh
Confidence 668999999999988 789999999999999999999984 58888888899999999999998888889
Q ss_pred ccCCCCCEEecCCCcCcccCCCCccccCcCCcccccCccCC
Q 037315 581 VELKELAVFSVAYNNLSGEIPEWKAQFATFNENSYEGNTFL 621 (693)
Q Consensus 581 ~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~~~~n~~~ 621 (693)
.++.+|.+||+.+|.+. .+|..++.++++.++.+.||||-
T Consensus 502 ~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 502 KNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 99999999999999998 56666899999999999999987
No 7
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-34 Score=300.73 Aligned_cols=497 Identities=25% Similarity=0.282 Sum_probs=323.8
Q ss_pred CcchhccCCCCCCEEECCCCCCCCcCCccccCCCCCCCEEECCCCcCcCcCCcccccCCCCCcEEEccCCcccccccccc
Q 037315 9 SLPWCLANMTSLRILDVSSNQLTGSISSSPLFYLTSIEELSLSNNHFHIPISLEPLFNHSRLKIFYADNNPINAKITKSH 88 (693)
Q Consensus 9 ~~~~~~~~l~~L~~L~Ls~n~l~~~l~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 88 (693)
.+|..+-.-..++.|+++.|.+. ..|-..+.+.-+|+.||+++|++. ..| ..+..+++|+.|+++.|.+....
T Consensus 12 ~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp-~~it~l~~L~~ln~s~n~i~~vp---- 84 (1081)
T KOG0618|consen 12 LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFP-IQITLLSHLRQLNLSRNYIRSVP---- 84 (1081)
T ss_pred ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCC-chhhhHHHHhhcccchhhHhhCc----
Confidence 34555555555777888887765 544435566666888888888775 455 35667778888888887775432
Q ss_pred CCCCCCccccEEecCCCCCCCCcCchhhcCCCCCCEEEccCccccccCchhhhhcCCCCCEEEccCCcccccCCCCCCCC
Q 037315 89 TLTTPKFQLASLSLSSSYGDGVTFPKFLYYQHDLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDSLAGPFRLPIHSH 168 (693)
Q Consensus 89 ~~~~~~~~L~~L~L~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~ 168 (693)
.......+|+++.| .++. ....|..+..+.+|+.|+++.|.+. .+|..+ ..++.++.+..++|.... .++..
T Consensus 85 ~s~~~~~~l~~lnL-~~n~-l~~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i-~~lt~~~~~~~s~N~~~~----~lg~~ 156 (1081)
T KOG0618|consen 85 SSCSNMRNLQYLNL-KNNR-LQSLPASISELKNLQYLDLSFNHFG-PIPLVI-EVLTAEEELAASNNEKIQ----RLGQT 156 (1081)
T ss_pred hhhhhhhcchhhee-ccch-hhcCchhHHhhhcccccccchhccC-CCchhH-HhhhHHHHHhhhcchhhh----hhccc
Confidence 11223336777777 3333 3346778888888888888888875 556554 567777888888772221 12222
Q ss_pred CCCCEEEccCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEE
Q 037315 169 RHLRLLDVSNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFL 248 (693)
Q Consensus 169 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 248 (693)
..+++++..|.+.+.++.++.. +.+ .|+|++|.+. . ..+..+++|+.|....|++. .+.. .-++|+.|
T Consensus 157 -~ik~~~l~~n~l~~~~~~~i~~-l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls-~l~~----~g~~l~~L 224 (1081)
T KOG0618|consen 157 -SIKKLDLRLNVLGGSFLIDIYN-LTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLS-ELEI----SGPSLTAL 224 (1081)
T ss_pred -cchhhhhhhhhcccchhcchhh-hhe--eeecccchhh-h--hhhhhccchhhhhhhhcccc-eEEe----cCcchhee
Confidence 2778888888887777766654 333 5888888876 1 24667788888888888776 3322 25778888
Q ss_pred EccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccc
Q 037315 249 ALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLE 328 (693)
Q Consensus 249 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~ 328 (693)
+.++|.+....+. ....+|+++++++|+++ .+|+++..+.+|+.++..+|.++ ..|..+...++|+.+.+..|.+.
T Consensus 225 ~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~ 300 (1081)
T KOG0618|consen 225 YADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE 300 (1081)
T ss_pred eeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh
Confidence 8888888743322 23467888888888888 55688888888888888888885 67777778888888888888887
Q ss_pred cCccccccCCCCCCEEECcCCcCCCCCCCCCC--CCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCCcchh
Q 037315 329 GPIPVEFCHLYSLQILDISDNNISGSLPSCFH--PLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGSIPDW 406 (693)
Q Consensus 329 ~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~ 406 (693)
.+|........|++|++..|++....+..+. ..++..++.+.|++...... .=...+.|+.|.+.+|.+++.....
T Consensus 301 -yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~-~e~~~~~Lq~LylanN~Ltd~c~p~ 378 (1081)
T KOG0618|consen 301 -YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSY-EENNHAALQELYLANNHLTDSCFPV 378 (1081)
T ss_pred -hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccc-cchhhHHHHHHHHhcCcccccchhh
Confidence 4455566788888888888888743332222 23466666666666333221 2233456777777777777666666
Q ss_pred hhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCc
Q 037315 407 IDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGH 486 (693)
Q Consensus 407 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (693)
+.++.+|+.|+|++|++.......+.++..|+.|++|||+++.++ ++...
T Consensus 379 l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp-~tva~----------------------------- 428 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLP-DTVAN----------------------------- 428 (1081)
T ss_pred hccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhh-HHHHh-----------------------------
Confidence 777777777777777777444455666777777777777765433 33222
Q ss_pred ccccccceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEe
Q 037315 487 VEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLD 566 (693)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 566 (693)
+..|++|...+|++. ..| .+..++.|+.+|+|.|+++...-..-..-++|++||
T Consensus 429 ------------------------~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLd 482 (1081)
T KOG0618|consen 429 ------------------------LGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLD 482 (1081)
T ss_pred ------------------------hhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceee
Confidence 335666777677665 444 667777777777777776654222211226777777
Q ss_pred CCCccccccCCcccccCCCCCEEecCCC
Q 037315 567 LSYNKLNGKIPHQLVELKELAVFSVAYN 594 (693)
Q Consensus 567 Ls~N~l~~~~~~~l~~l~~L~~L~l~~N 594 (693)
+++|.-.......|..++++...++.-|
T Consensus 483 lSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 483 LSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred ccCCcccccchhhhHHhhhhhheecccC
Confidence 7777644344555555666666665555
No 8
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=1.3e-33 Score=281.29 Aligned_cols=369 Identities=27% Similarity=0.328 Sum_probs=251.9
Q ss_pred CCCcEEEccCCccc-ccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEccccccccccCccCCCCCCCCeE
Q 037315 194 PRLISFNISMNALD-GSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGHMFSRNFNLINLRWL 272 (693)
Q Consensus 194 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 272 (693)
|-.+-.++++|.++ +..|.....+++++.|.|...++. .+|+.+.. +.+|++|.+++|++.. ....+..++.|+.+
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~-lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSR-LQKLEHLSMAHNQLIS-VHGELSDLPRLRSV 83 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHH-HhhhhhhhhhhhhhHh-hhhhhccchhhHHH
Confidence 34455555666555 455666666667777777766666 66666653 6777777777776665 34556666777777
Q ss_pred eccCccccc-cCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccccCccccccCCCCCCEEECcCCcC
Q 037315 273 QLEGNHFVG-EIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSLQILDISDNNI 351 (693)
Q Consensus 273 ~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~ 351 (693)
.+++|++.. -+|..+..+..|..|||++|++. ..|..+..-.++..|++++|+|..+....|.+++.|-.||+++|++
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh
Confidence 777776543 24555666777777777777776 5566666667777777777777655445566777777777777777
Q ss_pred CCCCCCCCCCCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccC-CCcchhhhCCCCCCEEEccCCcccccCCcc
Q 037315 352 SGSLPSCFHPLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLN-GSIPDWIDGLSQLSHLILGNNNLEGEVPVQ 430 (693)
Q Consensus 352 ~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 430 (693)
....|....+..|+.|.+++|.+.-.-- ..+..+++|+.|.+++.+-+ .-+|..+.++.+|+.++++.|.+. ..|+.
T Consensus 163 e~LPPQ~RRL~~LqtL~Ls~NPL~hfQL-rQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPec 240 (1255)
T KOG0444|consen 163 EMLPPQIRRLSMLQTLKLSNNPLNHFQL-RQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPEC 240 (1255)
T ss_pred hhcCHHHHHHhhhhhhhcCCChhhHHHH-hcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHH
Confidence 6555555556677777777776632211 13445667777777776543 236677777888888888888887 67777
Q ss_pred cCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCcccccccceeeeecccceeeecccc
Q 037315 431 LCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKV 510 (693)
Q Consensus 431 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (693)
+-.+++|+.|+|++|+|+...... ..
T Consensus 241 ly~l~~LrrLNLS~N~iteL~~~~------------------------------------------------------~~ 266 (1255)
T KOG0444|consen 241 LYKLRNLRRLNLSGNKITELNMTE------------------------------------------------------GE 266 (1255)
T ss_pred HhhhhhhheeccCcCceeeeeccH------------------------------------------------------HH
Confidence 778888888888888776432110 00
Q ss_pred ccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCcc-CcccccCCCCCCEEeCCCccccccCCcccccCCCCCEE
Q 037315 511 LSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGL-IPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVF 589 (693)
Q Consensus 511 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 589 (693)
-.+|+.|++|.|+++ ..|..+..++.|+.|.+.+|+++-. +|.+++.+.+|+++..++|.+. ..|+++..+.+|+.|
T Consensus 267 W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL 344 (1255)
T KOG0444|consen 267 WENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKL 344 (1255)
T ss_pred Hhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHh
Confidence 235777888888877 6777788888888888888877532 4777888888888888888776 777888888888888
Q ss_pred ecCCCcCcccCCCCccccCcCCcccccCccCCCCCC
Q 037315 590 SVAYNNLSGEIPEWKAQFATFNENSYEGNTFLCGLP 625 (693)
Q Consensus 590 ~l~~N~l~~~~p~~~~~~~~l~~~~~~~n~~~c~~~ 625 (693)
.|+.|++. ++|+.+..++.+..+++..||.+...|
T Consensus 345 ~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 345 KLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred ccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 88888876 567777777777778888888776544
No 9
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-33 Score=294.62 Aligned_cols=487 Identities=25% Similarity=0.277 Sum_probs=359.4
Q ss_pred EEECCCCCCCCcCCccccCCCCCCCEEECCCCcCcCcCCcccccCCCCCcEEEccCCccccccccccCCCCCCccccEEe
Q 037315 22 ILDVSSNQLTGSISSSPLFYLTSIEELSLSNNHFHIPISLEPLFNHSRLKIFYADNNPINAKITKSHTLTTPKFQLASLS 101 (693)
Q Consensus 22 ~L~Ls~n~l~~~l~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~L~~L~ 101 (693)
.+|++...+. .||. .+..-..++.|+++.|.+. ..|.+.+.+..+|+.|++++|.+.... .. .....+|+.|+
T Consensus 2 ~vd~s~~~l~-~ip~-~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~~fp-~~---it~l~~L~~ln 74 (1081)
T KOG0618|consen 2 HVDASDEQLE-LIPE-QILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQISSFP-IQ---ITLLSHLRQLN 74 (1081)
T ss_pred CcccccccCc-ccch-hhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccccCC-ch---hhhHHHHhhcc
Confidence 4788888887 8887 4544455999999999875 445666777777999999999875322 11 11122777777
Q ss_pred cCCCCCCCCcCchhhcCCCCCCEEEccCccccccCchhhhhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcC
Q 037315 102 LSSSYGDGVTFPKFLYYQHDLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDSLAGPFRLPIHSHRHLRLLDVSNNNF 181 (693)
Q Consensus 102 L~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~ 181 (693)
+ +.+.+. ..|.....+.+|+.+.|..|.+. ..|..+ ..+.+|+.|+++.|.+. ..|..+..+..++.++.++|..
T Consensus 75 ~-s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~-~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~ 149 (1081)
T KOG0618|consen 75 L-SRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASI-SELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEK 149 (1081)
T ss_pred c-chhhHh-hCchhhhhhhcchhheeccchhh-cCchhH-HhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchh
Confidence 7 333333 34566677777777777776654 456554 66777777777777776 4555666677777777777721
Q ss_pred cccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEccccccccccCc
Q 037315 182 QGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGHMFS 261 (693)
Q Consensus 182 ~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 261 (693)
. ..+++ ..++.+++..|.+.+.++..+..+.. .|+|.+|.+. .+.. ..+.+|+.+....|++.....
T Consensus 150 ~----~~lg~--~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~dl---s~~~~l~~l~c~rn~ls~l~~- 216 (1081)
T KOG0618|consen 150 I----QRLGQ--TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-VLDL---SNLANLEVLHCERNQLSELEI- 216 (1081)
T ss_pred h----hhhcc--ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh-hhhh---hhccchhhhhhhhcccceEEe-
Confidence 1 11222 13677777777777777777776666 7889888876 3222 247888888888888775432
Q ss_pred cCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccccCccccccCCCCC
Q 037315 262 RNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSL 341 (693)
Q Consensus 262 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 341 (693)
.-++|+.|+.++|.++...+. ..-.+|+.++++.|.++ ..|+|+..+.+|+.+....|++. ..|..+...++|
T Consensus 217 ---~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L 289 (1081)
T KOG0618|consen 217 ---SGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSL 289 (1081)
T ss_pred ---cCcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhH
Confidence 347899999999988854433 22358999999999998 56699999999999999999995 667777888999
Q ss_pred CEEECcCCcCCCCCCCCCCCCcccEEEccCcccccccCcccccCCCC-CcEEeCcCcccCCCcchhhhCCCCCCEEEccC
Q 037315 342 QILDISDNNISGSLPSCFHPLSITQVHLSKNMLHGQLKGGTFFNCSS-LVTLDLSYNLLNGSIPDWIDGLSQLSHLILGN 420 (693)
Q Consensus 342 ~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~-L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 420 (693)
+.|++..|.+....+..-...+|+.|++..|.+. .+|...+.-... |..|+.+.|++.....-.=..++.|+.|++.+
T Consensus 290 ~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Lylan 368 (1081)
T KOG0618|consen 290 VSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLAN 368 (1081)
T ss_pred HHHHhhhhhhhhCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhc
Confidence 9999999999866665556888999999999984 455445544444 77788888887633211122367899999999
Q ss_pred CcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCcccccccceeeeecc
Q 037315 421 NNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTK 500 (693)
Q Consensus 421 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (693)
|.+++.....+.+.++|+.|+|++|++...+...+.+
T Consensus 369 N~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~k------------------------------------------- 405 (1081)
T KOG0618|consen 369 NHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRK------------------------------------------- 405 (1081)
T ss_pred CcccccchhhhccccceeeeeecccccccCCHHHHhc-------------------------------------------
Confidence 9999888788999999999999999998666655544
Q ss_pred cceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCccc
Q 037315 501 NIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQL 580 (693)
Q Consensus 501 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 580 (693)
++.|++|+||+|+++ .+|..+..++.|++|...+|++... | .+..+++|+.+|+|.|.++...-..-
T Consensus 406 ----------le~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~f-P-e~~~l~qL~~lDlS~N~L~~~~l~~~ 472 (1081)
T KOG0618|consen 406 ----------LEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSF-P-ELAQLPQLKVLDLSCNNLSEVTLPEA 472 (1081)
T ss_pred ----------hHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeec-h-hhhhcCcceEEecccchhhhhhhhhh
Confidence 557999999999998 6678999999999999999999865 5 78899999999999999985433222
Q ss_pred ccCCCCCEEecCCCcCc
Q 037315 581 VELKELAVFSVAYNNLS 597 (693)
Q Consensus 581 ~~l~~L~~L~l~~N~l~ 597 (693)
..-++|++||+++|.-.
T Consensus 473 ~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 473 LPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred CCCcccceeeccCCccc
Confidence 23389999999999854
No 10
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=3.3e-33 Score=278.32 Aligned_cols=367 Identities=28% Similarity=0.343 Sum_probs=212.7
Q ss_pred ccEEecCCCCCCC-CcCchhhcCCCCCCEEEccCccccccCchhhhhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEE
Q 037315 97 LASLSLSSSYGDG-VTFPKFLYYQHDLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDSLAGPFRLPIHSHRHLRLLD 175 (693)
Q Consensus 97 L~~L~L~~~~~~~-~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~ 175 (693)
.+-+++ +.+..+ +.+|.....++.++.|.|....+. .+|+.+ +.+.+|++|.+++|++.. +...++.++.|+.++
T Consensus 9 VrGvDf-sgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL-~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 9 VRGVDF-SGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEEL-SRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSVI 84 (1255)
T ss_pred eecccc-cCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHH-HHHhhhhhhhhhhhhhHh-hhhhhccchhhHHHh
Confidence 444556 444444 457777777777777777666654 456654 667777777777776653 334566667777777
Q ss_pred ccCCcCcc-cCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEccccc
Q 037315 176 VSNNNFQG-HIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNS 254 (693)
Q Consensus 176 l~~n~~~~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~ 254 (693)
+..|++.. -+|..++. +..|+.|+|++|.++ ..|..+..-+++-+|+|++|+|. .||..++.+++.|-.||||+|+
T Consensus 85 ~R~N~LKnsGiP~diF~-l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFR-LKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhccccccCCCCchhcc-cccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccch
Confidence 77766532 35666665 566677777777666 45666666666667777777666 6666666666666666666666
Q ss_pred cccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCccc-ccCCccccCCCCCcEEEccCCccccCccc
Q 037315 255 LKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLS-GKIPRWLGNLTWLIHIIMPKNHLEGPIPV 333 (693)
Q Consensus 255 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~-~~~~~~l~~l~~L~~L~l~~n~~~~~~~~ 333 (693)
+... |..+..+.+|++|+|++|.+.-.--..+..+++|+.|.+++.+-+ ..+|..+..+.+|..++++.|.+. ..|+
T Consensus 162 Le~L-PPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPe 239 (1255)
T KOG0444|consen 162 LEML-PPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPE 239 (1255)
T ss_pred hhhc-CHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchH
Confidence 6653 344455666666666666554222223344455555555554332 234455555555555555555554 4455
Q ss_pred cccCCCCCCEEECcCCcCCCCCCCCCCCCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCCcchhhhCCCCC
Q 037315 334 EFCHLYSLQILDISDNNISGSLPSCFHPLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGSIPDWIDGLSQL 413 (693)
Q Consensus 334 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 413 (693)
.+..+++|+.|++++|+++.. .. ......+|++|++|.|+++ ..|+++..+++|
T Consensus 240 cly~l~~LrrLNLS~N~iteL------------------------~~-~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL 293 (1255)
T KOG0444|consen 240 CLYKLRNLRRLNLSGNKITEL------------------------NM-TEGEWENLETLNLSRNQLT-VLPDAVCKLTKL 293 (1255)
T ss_pred HHhhhhhhheeccCcCceeee------------------------ec-cHHHHhhhhhhccccchhc-cchHHHhhhHHH
Confidence 555555555555555554411 10 2223345566666666655 455555555555
Q ss_pred CEEEccCCccc-ccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCccccccc
Q 037315 414 SHLILGNNNLE-GEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQ 492 (693)
Q Consensus 414 ~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (693)
+.|.+.+|+++ +-+|.+++.+.
T Consensus 294 ~kLy~n~NkL~FeGiPSGIGKL~--------------------------------------------------------- 316 (1255)
T KOG0444|consen 294 TKLYANNNKLTFEGIPSGIGKLI--------------------------------------------------------- 316 (1255)
T ss_pred HHHHhccCcccccCCccchhhhh---------------------------------------------------------
Confidence 55555555554 12333344433
Q ss_pred ceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccc
Q 037315 493 EFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKL 572 (693)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 572 (693)
+|+++..++|.+. ..|+.+..+..|+.|.|++|++..+ |+++.-++.|+.||+..|+-
T Consensus 317 --------------------~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTL-PeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 317 --------------------QLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITL-PEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred --------------------hhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeec-hhhhhhcCCcceeeccCCcC
Confidence 4555555555554 5666666777777777777776644 66666677777777777765
Q ss_pred cccCC
Q 037315 573 NGKIP 577 (693)
Q Consensus 573 ~~~~~ 577 (693)
.-.+|
T Consensus 375 LVMPP 379 (1255)
T KOG0444|consen 375 LVMPP 379 (1255)
T ss_pred ccCCC
Confidence 53433
No 11
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=2.4e-23 Score=243.84 Aligned_cols=339 Identities=21% Similarity=0.233 Sum_probs=198.9
Q ss_pred CCCCCCCCEEEccCCc------CcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHH
Q 037315 165 IHSHRHLRLLDVSNNN------FQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHL 238 (693)
Q Consensus 165 l~~~~~L~~L~l~~n~------~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 238 (693)
+..+++|+.|.+..+. +...+|..+....++|+.|++.++.+. .+|..| ...+|+.|++.+|.+. .++..+
T Consensus 554 F~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~ 630 (1153)
T PLN03210 554 FKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGV 630 (1153)
T ss_pred HhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccccc
Confidence 4445555555554332 112334443332234666666655554 344444 3455666666666555 444443
Q ss_pred hhCCCCCcEEEccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCc
Q 037315 239 AMGCVNLEFLALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLI 318 (693)
Q Consensus 239 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~ 318 (693)
. .+++|+.|+++++......| .+..+++|++|++++|.....+|..+..+++|+.|++++|.....+|..+ ++++|+
T Consensus 631 ~-~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~ 707 (1153)
T PLN03210 631 H-SLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLY 707 (1153)
T ss_pred c-cCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCC
Confidence 2 35566666665544333233 24455666666666655444555556666666666666654333444433 456666
Q ss_pred EEEccCCccccCccccccCCCCCCEEECcCCcCCCCCCCCCCCCcccEEEccCccccc------ccCcccccCCCCCcEE
Q 037315 319 HIIMPKNHLEGPIPVEFCHLYSLQILDISDNNISGSLPSCFHPLSITQVHLSKNMLHG------QLKGGTFFNCSSLVTL 392 (693)
Q Consensus 319 ~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~~~~------~~~~~~~~~~~~L~~L 392 (693)
.|++++|......|. ..++|+.|++++|.+. .+|......+|+.|.+.++.... .++...+..+++|+.|
T Consensus 708 ~L~Lsgc~~L~~~p~---~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L 783 (1153)
T PLN03210 708 RLNLSGCSRLKSFPD---ISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRL 783 (1153)
T ss_pred EEeCCCCCCcccccc---ccCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchhe
Confidence 666666654433332 1345666666666654 34444445556666555432210 0111123345688888
Q ss_pred eCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCch
Q 037315 393 DLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDE 472 (693)
Q Consensus 393 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~ 472 (693)
++++|.....+|..+.++++|+.|++++|...+.+|..+ .+++|+.|++++|......|..
T Consensus 784 ~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~------------------ 844 (1153)
T PLN03210 784 FLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI------------------ 844 (1153)
T ss_pred eCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc------------------
Confidence 888887766788888888888888888876555666655 6888888888887654333321
Q ss_pred hhhHhhhhcccCCcccccccceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccC
Q 037315 473 QFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLI 552 (693)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 552 (693)
..+|+.|+|++|.+. .+|..+..+++|+.|++++|+-...+
T Consensus 845 --------------------------------------~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l 885 (1153)
T PLN03210 845 --------------------------------------STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRV 885 (1153)
T ss_pred --------------------------------------ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCcc
Confidence 236888888888887 56778888888888888875433334
Q ss_pred cccccCCCCCCEEeCCCcc
Q 037315 553 PSTFSNLKQIESLDLSYNK 571 (693)
Q Consensus 553 ~~~~~~l~~L~~L~Ls~N~ 571 (693)
|.....+++|+.|++++|.
T Consensus 886 ~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 886 SLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CcccccccCCCeeecCCCc
Confidence 6667778888888888875
No 12
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=2.2e-27 Score=225.13 Aligned_cols=134 Identities=22% Similarity=0.242 Sum_probs=113.4
Q ss_pred CCCCCEEEccCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEccc-CccccccchHHhhCCCCCc
Q 037315 168 HRHLRLLDVSNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSN-NQLTGEIPEHLAMGCVNLE 246 (693)
Q Consensus 168 ~~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~~l~~L~ 246 (693)
.+....++|..|.|+ .+|...|+.+++|+.|+|++|.|+.+.|++|..++.|..|-+.+ |+|+ .+|...|.++..++
T Consensus 66 P~~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slq 143 (498)
T KOG4237|consen 66 PPETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQ 143 (498)
T ss_pred CCcceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHH
Confidence 356778899999998 88888888888999999999999988899999998887777666 8887 88888888899999
Q ss_pred EEEccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcc
Q 037315 247 FLALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSL 303 (693)
Q Consensus 247 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i 303 (693)
.|.+.-|++..+....|..+++|..|.+.+|.+..+....|..+..++.+.+..|.+
T Consensus 144 rLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ 200 (498)
T KOG4237|consen 144 RLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPF 200 (498)
T ss_pred HHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcc
Confidence 999988888888888888899999999999988855555788888888888888763
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=6e-23 Score=240.56 Aligned_cols=341 Identities=21% Similarity=0.253 Sum_probs=236.7
Q ss_pred hhhhhcCCCCcEEEccCCc------ccccCCccCCCCC-CCCEEEcccCccccccchHHhhCCCCCcEEEcccccccccc
Q 037315 187 VEIGDILPRLISFNISMNA------LDGSIPSSFGNMN-LLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGHM 259 (693)
Q Consensus 187 ~~~~~~l~~L~~L~L~~n~------i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 259 (693)
...+..+++|+.|.+..+. +...+|..|..++ +|+.|++.++.+. .+|..+ ...+|++|++++|.+.. .
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f--~~~~L~~L~L~~s~l~~-L 626 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF--RPENLVKLQMQGSKLEK-L 626 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC--CccCCcEEECcCccccc-c
Confidence 3344557777777775543 2234555666554 5788888877776 677655 26778888888877765 3
Q ss_pred CccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccccCccccccCCC
Q 037315 260 FSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLY 339 (693)
Q Consensus 260 ~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~ 339 (693)
+..+..+++|+.|+++++.....+|. +..+++|+.|++++|.....+|..++.+++|+.|++++|.....+|..+ +++
T Consensus 627 ~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~ 704 (1153)
T PLN03210 627 WDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLK 704 (1153)
T ss_pred ccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCC
Confidence 45566778888888877654445553 6677788888888776656677777788888888888776555555544 677
Q ss_pred CCCEEECcCCcCCCCCCCCCCCCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccC-------CCcchhhhCCCC
Q 037315 340 SLQILDISDNNISGSLPSCFHPLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLN-------GSIPDWIDGLSQ 412 (693)
Q Consensus 340 ~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~-------~~~~~~~~~l~~ 412 (693)
+|+.|++++|.....+|.. ..+|+.|++++|.+. .+|. . ..+++|+.|++.++... ...+..+...++
T Consensus 705 sL~~L~Lsgc~~L~~~p~~--~~nL~~L~L~~n~i~-~lP~-~-~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~s 779 (1153)
T PLN03210 705 SLYRLNLSGCSRLKSFPDI--STNISWLDLDETAIE-EFPS-N-LRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPS 779 (1153)
T ss_pred CCCEEeCCCCCCccccccc--cCCcCeeecCCCccc-cccc-c-ccccccccccccccchhhccccccccchhhhhcccc
Confidence 8888888887655444432 356778888887763 4443 2 24677777777764321 111222333567
Q ss_pred CCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCccccccc
Q 037315 413 LSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQ 492 (693)
Q Consensus 413 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (693)
|+.|++++|.....+|..++++++|+.|++++|...+.+|...
T Consensus 780 L~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~------------------------------------- 822 (1153)
T PLN03210 780 LTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI------------------------------------- 822 (1153)
T ss_pred chheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-------------------------------------
Confidence 8888888887777788888888888888888876544444332
Q ss_pred ceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccc
Q 037315 493 EFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKL 572 (693)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 572 (693)
.+++|+.|++++|......|.. .++|++|+|++|.++.+ |..+..+++|+.|++++|+-
T Consensus 823 -----------------~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~~i-P~si~~l~~L~~L~L~~C~~ 881 (1153)
T PLN03210 823 -----------------NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIEEV-PWWIEKFSNLSFLDMNGCNN 881 (1153)
T ss_pred -----------------CccccCEEECCCCCcccccccc---ccccCEeECCCCCCccC-hHHHhcCCCCCEEECCCCCC
Confidence 1567999999998655455433 46899999999999854 77889999999999998655
Q ss_pred cccCCcccccCCCCCEEecCCCcC
Q 037315 573 NGKIPHQLVELKELAVFSVAYNNL 596 (693)
Q Consensus 573 ~~~~~~~l~~l~~L~~L~l~~N~l 596 (693)
...+|..+..+++|+.+++++|.-
T Consensus 882 L~~l~~~~~~L~~L~~L~l~~C~~ 905 (1153)
T PLN03210 882 LQRVSLNISKLKHLETVDFSDCGA 905 (1153)
T ss_pred cCccCcccccccCCCeeecCCCcc
Confidence 556777888899999999999863
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=2.4e-26 Score=218.14 Aligned_cols=309 Identities=23% Similarity=0.247 Sum_probs=162.4
Q ss_pred EEcccCccccccchHHhhCCCCCcEEEccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccC-C
Q 037315 223 LDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNN-N 301 (693)
Q Consensus 223 L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~-n 301 (693)
.+-++-.++ ++|..+ -+.-.+++|..|+|+.+++..|..+++|+.|||++|.|+.+.|++|.+++++.+|.+.+ |
T Consensus 51 VdCr~~GL~-eVP~~L---P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANL---PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred EEccCCCcc-cCcccC---CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 344444444 566554 24556677777777777777777777777777777777777777777777766665555 7
Q ss_pred cccccCCccccCCCCCcEEEccCCccccCccccccCCCCCCEEECcCCcCCCCCCCCCCCCcccEEEccCcccccccCcc
Q 037315 302 SLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSLQILDISDNNISGSLPSCFHPLSITQVHLSKNMLHGQLKGG 381 (693)
Q Consensus 302 ~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~ 381 (693)
+|++.....|+++..++.|.+.-|++.-...+.|..+++|..|.+.+|.+.. ++..
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~------------------------i~~~ 182 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQS------------------------ICKG 182 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhh------------------------hccc
Confidence 7776656667777777777777777766666667777777777777776642 2222
Q ss_pred cccCCCCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCc--
Q 037315 382 TFFNCSSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTK-- 459 (693)
Q Consensus 382 ~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-- 459 (693)
.|..+..++.+.+..|.+.. ..+++.+... + ...|..+++.....-..+.+.++..+.+..|....
T Consensus 183 tf~~l~~i~tlhlA~np~ic-----dCnL~wla~~-~------a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~es 250 (498)
T KOG4237|consen 183 TFQGLAAIKTLHLAQNPFIC-----DCNLPWLADD-L------AMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLES 250 (498)
T ss_pred cccchhccchHhhhcCcccc-----ccccchhhhH-H------hhchhhcccceecchHHHHHHHhcccchhhhhhhHHh
Confidence 44444555555555444210 0011111000 0 01111122222222222333333222222221100
Q ss_pred cccccCCCCCCchhhhHhhhhcccCCcccccccceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCC
Q 037315 460 LHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQ 539 (693)
Q Consensus 460 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 539 (693)
+.........+....+. ..| +.+++|+.|+|++|+++++.+.+|.++..++
T Consensus 251 l~s~~~~~d~~d~~cP~---------------------------~cf--~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~ 301 (498)
T KOG4237|consen 251 LPSRLSSEDFPDSICPA---------------------------KCF--KKLPNLRKLNLSNNKITRIEDGAFEGAAELQ 301 (498)
T ss_pred HHHhhccccCcCCcChH---------------------------HHH--hhcccceEeccCCCccchhhhhhhcchhhhh
Confidence 00000000000000000 000 1155666666666666666666666666666
Q ss_pred eeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCcccccCCCCCEEecCCCcCcccC
Q 037315 540 TLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVFSVAYNNLSGEI 600 (693)
Q Consensus 540 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 600 (693)
+|.|..|++..+....|.++..|+.|+|.+|+|+...|.+|..+.+|.+|++-.|++.|.+
T Consensus 302 eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC 362 (498)
T KOG4237|consen 302 ELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNC 362 (498)
T ss_pred hhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCcc
Confidence 6666666666555566666666666666666666666666666666666666666665543
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.84 E-value=2.3e-20 Score=202.52 Aligned_cols=112 Identities=27% Similarity=0.400 Sum_probs=51.0
Q ss_pred CEEEcccCccccccchHHhhCCCCCcEEEccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccC
Q 037315 221 QILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNN 300 (693)
Q Consensus 221 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 300 (693)
..|+++++.++ .+|..+. ++|+.|++++|+++.+. . .+++|++|++++|+++. +|.. .++|+.|++++
T Consensus 204 ~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~LP-~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 204 AVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTSLP-A---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFS 271 (788)
T ss_pred cEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCCCCC-C---CCCCCcEEEecCCccCc-ccCc---ccccceeeccC
Confidence 34555555554 4444332 24555555555554421 1 13455555555555552 2321 23455555555
Q ss_pred CcccccCCccccCCCCCcEEEccCCccccCccccccCCCCCCEEECcCCcCC
Q 037315 301 NSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSLQILDISDNNIS 352 (693)
Q Consensus 301 n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~ 352 (693)
|.+. .+|.. .+.|+.|++++|++... |. ..++|+.|++++|++.
T Consensus 272 N~L~-~Lp~l---p~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~ 315 (788)
T PRK15387 272 NPLT-HLPAL---PSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLA 315 (788)
T ss_pred Cchh-hhhhc---hhhcCEEECcCCccccc-cc---cccccceeECCCCccc
Confidence 5554 22221 13445555555555422 22 2345556666665554
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.83 E-value=9.9e-20 Score=197.60 Aligned_cols=263 Identities=27% Similarity=0.313 Sum_probs=135.2
Q ss_pred CcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEccccccccccCccCCCCCCCCeEecc
Q 037315 196 LISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGHMFSRNFNLINLRWLQLE 275 (693)
Q Consensus 196 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 275 (693)
-..|+++++.++ .+|..+. ++|+.|++.+|+++ .+|. ..++|++|++++|+++.+ |. ..++|+.|+++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~----lp~~Lk~LdLs~N~LtsL-P~---lp~sL~~L~Ls 270 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTSL-PV---LPPGLLELSIF 270 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC----CCCCCcEEEecCCccCcc-cC---cccccceeecc
Confidence 445555555555 3444443 24555566655555 4443 135566666666665543 21 12456666666
Q ss_pred CccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccccCccccccCCCCCCEEECcCCcCCCCC
Q 037315 276 GNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSLQILDISDNNISGSL 355 (693)
Q Consensus 276 ~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 355 (693)
+|.+. .+|.. .++|+.|++++|+++. +|. ..++|+.|++++|++.+. |.. ..+|+.|++++|.+.+ +
T Consensus 271 ~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLT-HLPAL---PSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchh-hhhhc---hhhcCEEECcCCcccc-ccc---cccccceeECCCCccccC-CCC---cccccccccccCcccc-c
Confidence 66655 23321 2345666666666652 332 235566666666666542 221 2345666666666652 2
Q ss_pred CCCCCCCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCC
Q 037315 356 PSCFHPLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLN 435 (693)
Q Consensus 356 ~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 435 (693)
|.. + .+|+.|++++|+++. +|.. .++|+.|++++|+++. +|.. ..
T Consensus 338 P~l--p-------------------------~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~ 382 (788)
T PRK15387 338 PTL--P-------------------------SGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PS 382 (788)
T ss_pred ccc--c-------------------------cccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---cc
Confidence 210 1 244555555555542 2221 2345555555555552 3322 23
Q ss_pred CCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCcccccccceeeeecccceeeeccccccCcc
Q 037315 436 QLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLS 515 (693)
Q Consensus 436 ~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 515 (693)
+|+.|++++|++.+.++ . +++|+
T Consensus 383 ~L~~LdLs~N~Lt~LP~-l--------------------------------------------------------~s~L~ 405 (788)
T PRK15387 383 GLKELIVSGNRLTSLPV-L--------------------------------------------------------PSELK 405 (788)
T ss_pred ccceEEecCCcccCCCC-c--------------------------------------------------------ccCCC
Confidence 45666666666553221 0 12456
Q ss_pred eEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCccc
Q 037315 516 GLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQL 580 (693)
Q Consensus 516 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 580 (693)
.|++++|++.+ +|.. ..+|+.|++++|+++.+ |..+.++++|+.|+|++|++++..+..+
T Consensus 406 ~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt~L-P~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 406 ELMVSGNRLTS-LPML---PSGLLSLSVYRNQLTRL-PESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred EEEccCCcCCC-CCcc---hhhhhhhhhccCccccc-ChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 66666666653 3432 23556666777776643 5566666777777777777766555544
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.75 E-value=3e-18 Score=187.61 Aligned_cols=55 Identities=22% Similarity=0.373 Sum_probs=23.6
Q ss_pred CCCEEeccCCcccccCCccccCCCCCcEEEccCCccccCccccccCCCCCCEEECcCCcCC
Q 037315 292 SLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSLQILDISDNNIS 352 (693)
Q Consensus 292 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~ 352 (693)
+|+.|++++|.+. .+|..+. ++|+.|++++|.+.. +|..+. ++|+.|++++|++.
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIR 296 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccc
Confidence 3444455544444 2333221 234444554444442 232221 24555555555544
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.74 E-value=4.8e-18 Score=185.96 Aligned_cols=117 Identities=26% Similarity=0.305 Sum_probs=52.4
Q ss_pred CCEEEccCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEc
Q 037315 171 LRLLDVSNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLAL 250 (693)
Q Consensus 171 L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l 250 (693)
...|++++++++ .+|..+. +.++.|++++|.++ .+|..+. ++|+.|++++|.++ .+|..+. .+|+.|++
T Consensus 180 ~~~L~L~~~~Lt-sLP~~Ip---~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~L 248 (754)
T PRK15370 180 KTELRLKILGLT-TIPACIP---EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP---DTIQEMEL 248 (754)
T ss_pred ceEEEeCCCCcC-cCCcccc---cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh---ccccEEEC
Confidence 345555555554 4444332 24555555555555 2333222 34555555555554 4444332 24555555
Q ss_pred cccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCccc
Q 037315 251 SNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLS 304 (693)
Q Consensus 251 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~ 304 (693)
++|.+..+ |..+. .+|+.|++++|++. .+|..+. ++|+.|++++|.++
T Consensus 249 s~N~L~~L-P~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 249 SINRITEL-PERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR 296 (754)
T ss_pred cCCccCcC-ChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc
Confidence 55554432 22221 24455555555444 2333222 24455555554444
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=1.9e-19 Score=183.96 Aligned_cols=58 Identities=26% Similarity=0.163 Sum_probs=27.4
Q ss_pred EEEcccCccccccchHHhhCCCCCcEEEccccccccc----cCccCCCCCCCCeEeccCccc
Q 037315 222 ILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGH----MFSRNFNLINLRWLQLEGNHF 279 (693)
Q Consensus 222 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l 279 (693)
.|+|..+.+.+.--...+..+..|++|+++++.++.. .+..+...+++++++++++.+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~ 63 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNET 63 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEecccccc
Confidence 3455555554322223333455566666666665431 122233444455555555443
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=7.4e-19 Score=179.63 Aligned_cols=58 Identities=24% Similarity=0.236 Sum_probs=34.0
Q ss_pred EEEccCCccc-ccCCccCCCCCCCCEEEcccCccccc----cchHHhhCCCCCcEEEccccccc
Q 037315 198 SFNISMNALD-GSIPSSFGNMNLLQILDLSNNQLTGE----IPEHLAMGCVNLEFLALSNNSLK 256 (693)
Q Consensus 198 ~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~~l~~L~~L~l~~n~l~ 256 (693)
.|+|..+.++ ......+..+..|+.|+++++.+++. ++..+ ...+++++++++++.+.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l-~~~~~l~~l~l~~~~~~ 64 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASAL-RPQPSLKELCLSLNETG 64 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHH-hhCCCceEEeccccccC
Confidence 3556666554 22333455566788888888877432 22222 24566888888777665
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.65 E-value=2.8e-18 Score=144.65 Aligned_cols=90 Identities=33% Similarity=0.455 Sum_probs=53.5
Q ss_pred CCCCCCCCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCC
Q 037315 355 LPSCFHPLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGL 434 (693)
Q Consensus 355 ~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 434 (693)
++..|....++.|.+++|++....| .++.+.+|+.|++++|++. ..|..++.+++|+.|+++-|++. ..|.+|+.+
T Consensus 26 ~~gLf~~s~ITrLtLSHNKl~~vpp--nia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~ 101 (264)
T KOG0617|consen 26 LPGLFNMSNITRLTLSHNKLTVVPP--NIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSF 101 (264)
T ss_pred cccccchhhhhhhhcccCceeecCC--cHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCC
Confidence 4445555566666666666643333 4556666666666666665 45555666666666666666665 556666666
Q ss_pred CCCCEEEccCCcCc
Q 037315 435 NQLQLLDLSNNNLH 448 (693)
Q Consensus 435 ~~L~~L~l~~n~~~ 448 (693)
|.|+.||+.+|++.
T Consensus 102 p~levldltynnl~ 115 (264)
T KOG0617|consen 102 PALEVLDLTYNNLN 115 (264)
T ss_pred chhhhhhccccccc
Confidence 66666666665554
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.64 E-value=5.7e-18 Score=142.78 Aligned_cols=182 Identities=29% Similarity=0.465 Sum_probs=153.3
Q ss_pred cccCCCCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccc
Q 037315 382 TFFNCSSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLH 461 (693)
Q Consensus 382 ~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~ 461 (693)
.+..+.+++.|.+++|+++ .+|..+..+.+|+.|++.+|+++ ..|..++.++.|+.|+++-|++. ..|..|+.
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs---- 100 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGS---- 100 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCC----
Confidence 4556788999999999999 66777999999999999999999 78888999999999999998875 55666665
Q ss_pred cccCCCCCCchhhhHhhhhcccCCcccccccceeeeecccceeeeccccccCcceEECCCCcccc-cCchhhccCCCCCe
Q 037315 462 ESYNNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIG-HIPPQVGNLTRIQT 540 (693)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~ 540 (693)
++.|+.|||++|++.+ ..|+.|..++.|+.
T Consensus 101 -------------------------------------------------~p~levldltynnl~e~~lpgnff~m~tlra 131 (264)
T KOG0617|consen 101 -------------------------------------------------FPALEVLDLTYNNLNENSLPGNFFYMTTLRA 131 (264)
T ss_pred -------------------------------------------------CchhhhhhccccccccccCCcchhHHHHHHH
Confidence 6689999999999864 57888999999999
Q ss_pred eeCCCccCCccCcccccCCCCCCEEeCCCccccccCCcccccCCCCCEEecCCCcCcccCCCCccccCcC---CcccccC
Q 037315 541 LNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVFSVAYNNLSGEIPEWKAQFATF---NENSYEG 617 (693)
Q Consensus 541 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l---~~~~~~~ 617 (693)
|+|++|.+. +.|..++++++|+.|.+.+|.+. .+|..++.+..|+.|.+.+|+++-..|+ ++++.-. .....+.
T Consensus 132 lyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppe-l~~l~l~~~k~v~r~E~ 208 (264)
T KOG0617|consen 132 LYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPE-LANLDLVGNKQVMRMEE 208 (264)
T ss_pred HHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeeecChh-hhhhhhhhhHHHHhhhh
Confidence 999999998 55778999999999999999998 7899999999999999999999976665 3444322 2234567
Q ss_pred ccCCC
Q 037315 618 NTFLC 622 (693)
Q Consensus 618 n~~~c 622 (693)
|||.-
T Consensus 209 NPwv~ 213 (264)
T KOG0617|consen 209 NPWVN 213 (264)
T ss_pred CCCCC
Confidence 77764
No 23
>PLN03150 hypothetical protein; Provisional
Probab=99.50 E-value=6.6e-14 Score=153.33 Aligned_cols=118 Identities=35% Similarity=0.635 Sum_probs=107.0
Q ss_pred CcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCcccccCCCCCEEecC
Q 037315 513 LLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVFSVA 592 (693)
Q Consensus 513 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~ 592 (693)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcccCCCCccc-cCcCCcccccCccCCCCCCC-CCCC
Q 037315 593 YNNLSGEIPEWKAQ-FATFNENSYEGNTFLCGLPL-PICR 630 (693)
Q Consensus 593 ~N~l~~~~p~~~~~-~~~l~~~~~~~n~~~c~~~~-~~c~ 630 (693)
+|+++|.+|..+.. +.......+.+|+.+|++|. ..|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 99999999987654 24556778999999998764 3564
No 24
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.22 E-value=2.1e-12 Score=119.32 Aligned_cols=86 Identities=31% Similarity=0.322 Sum_probs=55.6
Q ss_pred ccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccC-CcccccCCCCCEE
Q 037315 511 LSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKI-PHQLVELKELAVF 589 (693)
Q Consensus 511 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~l~~l~~L~~L 589 (693)
+++|+.||||+|.++. +.++-..+-+.+.|.|++|.|.++ .+++.+-+|..||+++|+|.... -..++++|-|+++
T Consensus 328 L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l 404 (490)
T KOG1259|consen 328 LPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETL 404 (490)
T ss_pred cccceEeecccchhHh-hhhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHH
Confidence 4566666666666653 233334566677777777777655 56666777777777777776332 2356677777777
Q ss_pred ecCCCcCccc
Q 037315 590 SVAYNNLSGE 599 (693)
Q Consensus 590 ~l~~N~l~~~ 599 (693)
.+.+||+.+.
T Consensus 405 ~L~~NPl~~~ 414 (490)
T KOG1259|consen 405 RLTGNPLAGS 414 (490)
T ss_pred hhcCCCcccc
Confidence 7777777743
No 25
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.19 E-value=3.4e-12 Score=124.30 Aligned_cols=165 Identities=19% Similarity=0.221 Sum_probs=103.4
Q ss_pred cCCCCCCEEECCCCCCCCcCCc-cccCCCCCCCEEECCCCcCcCcCCcccc-cCCCCCcEEEccCCccccccccccCCCC
Q 037315 15 ANMTSLRILDVSSNQLTGSISS-SPLFYLTSIEELSLSNNHFHIPISLEPL-FNHSRLKIFYADNNPINAKITKSHTLTT 92 (693)
Q Consensus 15 ~~l~~L~~L~Ls~n~l~~~l~~-~~~~~l~~L~~L~Ls~n~~~~~~~~~~~-~~l~~L~~L~l~~n~~~~~~~~~~~~~~ 92 (693)
+++..|+...|.++.+. ..+. .....|++++.||||.|-+....+...+ ..+++|+.|+++.|++........
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~---- 192 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNT---- 192 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccc----
Confidence 46788899999988876 4331 2456789999999999977655444433 458999999999988753322111
Q ss_pred CCccccEEecCCCCCCCCcCchhhcCCCCCCEEEccCccccccCchhhhhcCCCCCEEEccCCcccccCCCCCCCCCCCC
Q 037315 93 PKFQLASLSLSSSYGDGVTFPKFLYYQHDLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDSLAGPFRLPIHSHRHLR 172 (693)
Q Consensus 93 ~~~~L~~L~L~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~ 172 (693)
+ ..++.|+.|.+++|.++-.-..+....+|+|+.|++..|............++.|+
T Consensus 193 ------~-----------------~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~ 249 (505)
T KOG3207|consen 193 ------T-----------------LLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQ 249 (505)
T ss_pred ------h-----------------hhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHh
Confidence 1 13356677777777665433344456677888888877753333333444566777
Q ss_pred EEEccCCcCcccCCh-hhhhcCCCCcEEEccCCcccc
Q 037315 173 LLDVSNNNFQGHIPV-EIGDILPRLISFNISMNALDG 208 (693)
Q Consensus 173 ~L~l~~n~~~~~~~~-~~~~~l~~L~~L~L~~n~i~~ 208 (693)
.|||++|.+. ..+. ..-..+|.|+.|+++.|.+..
T Consensus 250 ~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~s 285 (505)
T KOG3207|consen 250 ELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIAS 285 (505)
T ss_pred hccccCCccc-ccccccccccccchhhhhccccCcch
Confidence 7777777665 2221 111226677777777766653
No 26
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.15 E-value=8.8e-12 Score=115.32 Aligned_cols=133 Identities=33% Similarity=0.372 Sum_probs=108.9
Q ss_pred cCCCCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccc
Q 037315 384 FNCSSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHES 463 (693)
Q Consensus 384 ~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~ 463 (693)
.....|+++|+++|.|+ .+.+.+.-.|.++.|+++.|.++.. +.+..+++|+.||+++|.++.+..- ..
T Consensus 281 dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~Gw---h~----- 349 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECVGW---HL----- 349 (490)
T ss_pred chHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhhhh---Hh-----
Confidence 34578999999999998 5667788889999999999999843 3388899999999999988644221 11
Q ss_pred cCCCCCCchhhhHhhhhcccCCcccccccceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeC
Q 037315 464 YNNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNL 543 (693)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 543 (693)
.+.+.+.|.|+.|.+... ..++.+-+|..||+
T Consensus 350 ----------------------------------------------KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl 381 (490)
T KOG1259|consen 350 ----------------------------------------------KLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDL 381 (490)
T ss_pred ----------------------------------------------hhcCEeeeehhhhhHhhh--hhhHhhhhheeccc
Confidence 155789999999998744 56788899999999
Q ss_pred CCccCCccCc-ccccCCCCCCEEeCCCcccccc
Q 037315 544 SHNNLTGLIP-STFSNLKQIESLDLSYNKLNGK 575 (693)
Q Consensus 544 s~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~ 575 (693)
++|+|..... ..+++++.|+.+.|.+|++.+.
T Consensus 382 ~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 382 SSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred cccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 9999987643 7899999999999999999843
No 27
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.12 E-value=7.6e-11 Score=105.26 Aligned_cols=80 Identities=30% Similarity=0.343 Sum_probs=30.2
Q ss_pred ccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCc-ccccCCCCCCEEeCCCccccccCC---cccccCCCC
Q 037315 511 LSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIP-STFSNLKQIESLDLSYNKLNGKIP---HQLVELKEL 586 (693)
Q Consensus 511 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~---~~l~~l~~L 586 (693)
++.|++|++++|.++...+.....+++|++|++++|+|..... ..+..+++|+.|+|.+|++....- ..+..+|+|
T Consensus 63 L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~L 142 (175)
T PF14580_consen 63 LPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSL 142 (175)
T ss_dssp -TT--EEE--SS---S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-
T ss_pred hhhhhhcccCCCCCCccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChh
Confidence 3456666666666654322222356667777777776655422 445566677777777777653211 134456666
Q ss_pred CEEe
Q 037315 587 AVFS 590 (693)
Q Consensus 587 ~~L~ 590 (693)
+.||
T Consensus 143 k~LD 146 (175)
T PF14580_consen 143 KVLD 146 (175)
T ss_dssp SEET
T ss_pred heeC
Confidence 6665
No 28
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=7.2e-12 Score=122.09 Aligned_cols=111 Identities=30% Similarity=0.301 Sum_probs=48.5
Q ss_pred cCCCCCEEEccCCcccccCC-CCCCCCCCCCEEEccCCcCcccCC-hhhhhcCCCCcEEEccCCcccccCCc-cCCCCCC
Q 037315 143 NNTKLRQLSLVNDSLAGPFR-LPIHSHRHLRLLDVSNNNFQGHIP-VEIGDILPRLISFNISMNALDGSIPS-SFGNMNL 219 (693)
Q Consensus 143 ~~~~L~~L~l~~~~~~~~~~-~~l~~~~~L~~L~l~~n~~~~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~-~~~~l~~ 219 (693)
++.+|+.+.|.++.+..... .....+++++.||++.|-+....+ ..+.+.+|+|+.|+++.|++.....+ .-..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 34556666666555443221 233445566666666654432111 12334455556666655554311110 0112344
Q ss_pred CCEEEcccCccccccchHHhhCCCCCcEEEcccc
Q 037315 220 LQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNN 253 (693)
Q Consensus 220 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n 253 (693)
|+.|.++.|+++..--..+...+++|+.|++..|
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N 232 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEAN 232 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcc
Confidence 5555555555442222222233445555555444
No 29
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.10 E-value=1.1e-10 Score=122.72 Aligned_cols=198 Identities=36% Similarity=0.497 Sum_probs=103.2
Q ss_pred EEEccCCccccCccccccCCCCCCEEECcCCcCCCCCCCCCCCCcccEEEccCcccccccCcccccCCCCCcEEeCcCcc
Q 037315 319 HIIMPKNHLEGPIPVEFCHLYSLQILDISDNNISGSLPSCFHPLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNL 398 (693)
Q Consensus 319 ~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~ 398 (693)
.++...+.+.... ..+...+.++.+++.+|.+....+...... ++|+.|++++|.
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~~i~~~~~~~~------------------------~nL~~L~l~~N~ 151 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNITDIPPLIGLLK------------------------SNLKELDLSDNK 151 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccccCccccccch------------------------hhcccccccccc
Confidence 4666666653222 223445667777777777764333222221 255555555555
Q ss_pred cCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhh
Q 037315 399 LNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILF 478 (693)
Q Consensus 399 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 478 (693)
+. .+|..+..+++|+.|++++|+++ ..+......+.|+.|++++|++..+.+.. .
T Consensus 152 i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~~l~~~~-~---------------------- 206 (394)
T COG4886 152 IE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKISDLPPEI-E---------------------- 206 (394)
T ss_pred hh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccccCchhh-h----------------------
Confidence 55 33344555555666666666555 33333335556666666666555433221 0
Q ss_pred hhcccCCcccccccceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccC
Q 037315 479 SIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSN 558 (693)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 558 (693)
.+..|++|++++|.+. ..+..+..++++..+.+.+|++... +..++.
T Consensus 207 -------------------------------~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~~~~~ 253 (394)
T COG4886 207 -------------------------------LLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PESIGN 253 (394)
T ss_pred -------------------------------hhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-cchhcc
Confidence 0223555666665432 3344455555666666666665543 345555
Q ss_pred CCCCCEEeCCCccccccCCcccccCCCCCEEecCCCcCcccCC
Q 037315 559 LKQIESLDLSYNKLNGKIPHQLVELKELAVFSVAYNNLSGEIP 601 (693)
Q Consensus 559 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p 601 (693)
+++++.|++++|.++...+ +..+.+++.|++++|.++...|
T Consensus 254 l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 254 LSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred ccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 5666666666666653333 5555666666666666654444
No 30
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.10 E-value=7.3e-12 Score=118.76 Aligned_cols=139 Identities=18% Similarity=0.198 Sum_probs=85.5
Q ss_pred CCCCCEEeccCCccccc----CCccccCCCCCcEEEccCCccccC----ccccccCCCCCCEEECcCCcCCCCCCCCCCC
Q 037315 290 CSSLEGLYLNNNSLSGK----IPRWLGNLTWLIHIIMPKNHLEGP----IPVEFCHLYSLQILDISDNNISGSLPSCFHP 361 (693)
Q Consensus 290 l~~L~~L~L~~n~i~~~----~~~~l~~l~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 361 (693)
-+.|+++...+|++.+. +...+...+.|+.+.+..|.|... ...+|..+++|+.||+.+|.++....
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs----- 230 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGS----- 230 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHH-----
Confidence 35667777777666532 223445566677777777665432 22346677777777777776652211
Q ss_pred CcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCCcchhh-----hCCCCCCEEEccCCccccc----CCcccC
Q 037315 362 LSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGSIPDWI-----DGLSQLSHLILGNNNLEGE----VPVQLC 432 (693)
Q Consensus 362 ~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~-----~~l~~L~~L~L~~n~l~~~----~~~~~~ 432 (693)
..-...+..+++|++|++++|.+......+| ...|+|+.|.+.+|.++.. +...+.
T Consensus 231 ---------------~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ 295 (382)
T KOG1909|consen 231 ---------------VALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMA 295 (382)
T ss_pred ---------------HHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHh
Confidence 1111255666788888888887765444333 2367888888888888632 223345
Q ss_pred CCCCCCEEEccCCcCc
Q 037315 433 GLNQLQLLDLSNNNLH 448 (693)
Q Consensus 433 ~l~~L~~L~l~~n~~~ 448 (693)
..|.|..|+|++|.+.
T Consensus 296 ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 296 EKPDLEKLNLNGNRLG 311 (382)
T ss_pred cchhhHHhcCCccccc
Confidence 5788888888888873
No 31
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.06 E-value=1.3e-10 Score=103.87 Aligned_cols=109 Identities=32% Similarity=0.393 Sum_probs=33.8
Q ss_pred CCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCc
Q 037315 167 SHRHLRLLDVSNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLE 246 (693)
Q Consensus 167 ~~~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 246 (693)
+..++++|++++|.|+ .+. .+...+.+|+.|++++|.|+.. +.+..+++|+.|++++|.++ .+++.+...+++|+
T Consensus 17 n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-TT--
T ss_pred cccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccccchHHhCCcCC
Confidence 3445677777777765 332 3333356777777777777643 24667777888888888777 56554444477777
Q ss_pred EEEccccccccccC-ccCCCCCCCCeEeccCcccc
Q 037315 247 FLALSNNSLKGHMF-SRNFNLINLRWLQLEGNHFV 280 (693)
Q Consensus 247 ~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~ 280 (693)
+|++++|+|..... ..+..+++|+.|++.+|.+.
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 78777777765321 23445566666666666555
No 32
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.05 E-value=1.6e-11 Score=116.49 Aligned_cols=175 Identities=21% Similarity=0.210 Sum_probs=88.7
Q ss_pred cCCCCCCCEEECCCCcCcCcCC---cccccCCCCCcEEEccCCccccccccccCCCCCCccccEEecCCCCCCCCcCchh
Q 037315 39 LFYLTSIEELSLSNNHFHIPIS---LEPLFNHSRLKIFYADNNPINAKITKSHTLTTPKFQLASLSLSSSYGDGVTFPKF 115 (693)
Q Consensus 39 ~~~l~~L~~L~Ls~n~~~~~~~---~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~ 115 (693)
+..+..+++++||+|.+..... ...+.+.++|+..+++.--. +.....+.. .|+ .+...
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ft-GR~~~Ei~e-----~L~------------~l~~a 87 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFT-GRLKDEIPE-----ALK------------MLSKA 87 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhc-CCcHHHHHH-----HHH------------HHHHH
Confidence 4556777778888777632111 12344556666666654211 100000000 000 01233
Q ss_pred hcCCCCCCEEEccCccccccCch---hhhhcCCCCCEEEccCCcccccC-------------CCCCCCCCCCCEEEccCC
Q 037315 116 LYYQHDLEDVHFSRIQMNGEFPN---WLLENNTKLRQLSLVNDSLAGPF-------------RLPIHSHRHLRLLDVSNN 179 (693)
Q Consensus 116 l~~~~~L~~L~l~~~~~~~~~~~---~~~~~~~~L~~L~l~~~~~~~~~-------------~~~l~~~~~L~~L~l~~n 179 (693)
+..+++|++++||+|.+....+. .+++.+..|++|.|.+|.+.-.. ......-+.|+++...+|
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 44566788888888876543332 33466778888888887664211 111233456777777777
Q ss_pred cCcccCCh---hhhhcCCCCcEEEccCCccccc----CCccCCCCCCCCEEEcccCccc
Q 037315 180 NFQGHIPV---EIGDILPRLISFNISMNALDGS----IPSSFGNMNLLQILDLSNNQLT 231 (693)
Q Consensus 180 ~~~~~~~~---~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~l~ 231 (693)
++...... ..++..+.|+.+.+..|.|... ...+|..+++|++|||.+|-++
T Consensus 168 rlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft 226 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFT 226 (382)
T ss_pred ccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhh
Confidence 66421111 1233345666666666665421 1223455566666666665554
No 33
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.05 E-value=2.7e-10 Score=119.72 Aligned_cols=102 Identities=32% Similarity=0.435 Sum_probs=54.4
Q ss_pred EEEccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCC-CCCEEeccCCcccccCCccccCCCCCcEEEccCC
Q 037315 247 FLALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCS-SLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKN 325 (693)
Q Consensus 247 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n 325 (693)
.++.+.+.+... ...+..++.++.|++.+|.++ .++....... +|+.|++++|.+. .++..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 455665555321 122333456666666666666 3343344442 6666666666665 33344555666666666666
Q ss_pred ccccCccccccCCCCCCEEECcCCcCC
Q 037315 326 HLEGPIPVEFCHLYSLQILDISDNNIS 352 (693)
Q Consensus 326 ~~~~~~~~~~~~l~~L~~L~l~~n~~~ 352 (693)
++... +......+.|+.|++++|++.
T Consensus 174 ~l~~l-~~~~~~~~~L~~L~ls~N~i~ 199 (394)
T COG4886 174 DLSDL-PKLLSNLSNLNNLDLSGNKIS 199 (394)
T ss_pred hhhhh-hhhhhhhhhhhheeccCCccc
Confidence 66532 222224555555666655554
No 34
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.04 E-value=5.2e-12 Score=126.91 Aligned_cols=174 Identities=32% Similarity=0.448 Sum_probs=134.8
Q ss_pred CcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEE
Q 037315 362 LSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLD 441 (693)
Q Consensus 362 ~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 441 (693)
..-...+++.|++ ..+|. .+..+..|+.+.++.|.+. .+|..+.++..|+.|+++.|++. ..|..++.|+ |+.|-
T Consensus 75 tdt~~aDlsrNR~-~elp~-~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 75 TDTVFADLSRNRF-SELPE-EACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred cchhhhhcccccc-ccCch-HHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 3345567777777 34554 5666777788888888776 67777888888888888888887 5666666664 77788
Q ss_pred ccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCcccccccceeeeecccceeeeccccccCcceEECCC
Q 037315 442 LSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSC 521 (693)
Q Consensus 442 l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~ 521 (693)
+++|+++..+++ ... ...|..||.+.
T Consensus 150 ~sNNkl~~lp~~-ig~-----------------------------------------------------~~tl~~ld~s~ 175 (722)
T KOG0532|consen 150 VSNNKLTSLPEE-IGL-----------------------------------------------------LPTLAHLDVSK 175 (722)
T ss_pred EecCccccCCcc-ccc-----------------------------------------------------chhHHHhhhhh
Confidence 888877644332 221 45788999999
Q ss_pred CcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCcccccCCCCCEEecCCCcCcc
Q 037315 522 NKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVFSVAYNNLSG 598 (693)
Q Consensus 522 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 598 (693)
|.+. ..|..++++.+|+.|++..|++..++ ..+.. -.|..||+|+|++. .+|-.|..+..|++|-|.+|++..
T Consensus 176 nei~-slpsql~~l~slr~l~vrRn~l~~lp-~El~~-LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 176 NEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLP-EELCS-LPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred hhhh-hchHHhhhHHHHHHHHHhhhhhhhCC-HHHhC-CceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCC
Confidence 9988 67888999999999999999999774 44554 46889999999998 889999999999999999999984
No 35
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.02 E-value=3.7e-11 Score=126.25 Aligned_cols=246 Identities=28% Similarity=0.269 Sum_probs=135.9
Q ss_pred CCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccccCccccccCCCCCCEEEC
Q 037315 267 INLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSLQILDI 346 (693)
Q Consensus 267 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l 346 (693)
..++.+.++.|.+.. .-..+..+++|+.|++.+|.+... ...+..+++|++|++++|.|... ..+..++.|+.|++
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l 147 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNL 147 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccc--cchhhccchhhhee
Confidence 333444444444432 112234445555555555555422 11134445555555555555433 22334444555555
Q ss_pred cCCcCCCCCCCCCCCCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCCcc-hhhhCCCCCCEEEccCCcccc
Q 037315 347 SDNNISGSLPSCFHPLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGSIP-DWIDGLSQLSHLILGNNNLEG 425 (693)
Q Consensus 347 ~~n~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~ 425 (693)
++|.+... . .+..++.|+.+++++|.+....+ . ...+.+++.+.+.+|.+..
T Consensus 148 ~~N~i~~~------------------------~--~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 148 SGNLISDI------------------------S--GLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE 200 (414)
T ss_pred ccCcchhc------------------------c--CCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc
Confidence 55555411 1 33335666666666666654332 1 3556667777777776652
Q ss_pred cCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCcccccccceeeeecccceee
Q 037315 426 EVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYI 505 (693)
Q Consensus 426 ~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (693)
...+..+..+..+++..|.++.+.+...
T Consensus 201 --i~~~~~~~~l~~~~l~~n~i~~~~~l~~-------------------------------------------------- 228 (414)
T KOG0531|consen 201 --IEGLDLLKKLVLLSLLDNKISKLEGLNE-------------------------------------------------- 228 (414)
T ss_pred --ccchHHHHHHHHhhcccccceeccCccc--------------------------------------------------
Confidence 2233344444444666666543322110
Q ss_pred ecccccc--CcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCcccccc---CCcc-
Q 037315 506 FQGKVLS--LLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGK---IPHQ- 579 (693)
Q Consensus 506 ~~~~~l~--~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~- 579 (693)
+. .|+.+++++|++.. .+..+..++.+..|++++|++... ..+...+.+..+....|.+... ....
T Consensus 229 -----~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (414)
T KOG0531|consen 229 -----LVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYI 300 (414)
T ss_pred -----chhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhcccc
Confidence 11 27788888888763 335677788888888888888766 5566777888888888887622 1221
Q ss_pred cccCCCCCEEecCCCcCcccCCCC
Q 037315 580 LVELKELAVFSVAYNNLSGEIPEW 603 (693)
Q Consensus 580 l~~l~~L~~L~l~~N~l~~~~p~~ 603 (693)
....+.++...+.+|+.....+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~ 324 (414)
T KOG0531|consen 301 TSAAPTLVTLTLELNPIRKISSLD 324 (414)
T ss_pred ccccccccccccccCccccccccc
Confidence 455678888888888887765543
No 36
>PLN03150 hypothetical protein; Provisional
Probab=99.02 E-value=5.3e-10 Score=122.79 Aligned_cols=114 Identities=33% Similarity=0.539 Sum_probs=102.3
Q ss_pred CCCEEEccCCcCcccCCCCcccCccccccCCCCCCchhhhHhhhhcccCCcccccccceeeeecccceeeeccccccCcc
Q 037315 436 QLQLLDLSNNNLHGLIPPCFDNTKLHESYNNSSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLS 515 (693)
Q Consensus 436 ~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 515 (693)
.++.|+|++|.+.+.+|..+.. +++|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~-----------------------------------------------------L~~L~ 445 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISK-----------------------------------------------------LRHLQ 445 (623)
T ss_pred EEEEEECCCCCccccCCHHHhC-----------------------------------------------------CCCCC
Confidence 4788999999999888877655 55899
Q ss_pred eEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCcccccC-CCCCEEecCCC
Q 037315 516 GLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVEL-KELAVFSVAYN 594 (693)
Q Consensus 516 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~l~~N 594 (693)
.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|+.++++++|+.|+|++|++++.+|..+... .++..+++.+|
T Consensus 446 ~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N 525 (623)
T PLN03150 446 SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525 (623)
T ss_pred EEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988764 46789999999
Q ss_pred cCcccCCC
Q 037315 595 NLSGEIPE 602 (693)
Q Consensus 595 ~l~~~~p~ 602 (693)
+..|..|.
T Consensus 526 ~~lc~~p~ 533 (623)
T PLN03150 526 AGLCGIPG 533 (623)
T ss_pred ccccCCCC
Confidence 88776553
No 37
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.97 E-value=2.8e-10 Score=83.44 Aligned_cols=59 Identities=39% Similarity=0.629 Sum_probs=30.6
Q ss_pred CCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCcccccCCCCCEEecCCCc
Q 037315 537 RIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVFSVAYNN 595 (693)
Q Consensus 537 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~ 595 (693)
+|++|++++|+++.+.++.|.++++|++|++++|.++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555555544555555555555555555554444555555555555555554
No 38
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.97 E-value=2.7e-11 Score=121.94 Aligned_cols=174 Identities=30% Similarity=0.442 Sum_probs=139.3
Q ss_pred CCCCCEEEccCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcE
Q 037315 168 HRHLRLLDVSNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEF 247 (693)
Q Consensus 168 ~~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~ 247 (693)
+.--...|++.|++. ++|..+.. +..|+.+.+..|.+. .+|..++++..|..+|++.|++. .+|..++ .--|+.
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~-f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC--~lpLkv 147 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACA-FVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLC--DLPLKV 147 (722)
T ss_pred ccchhhhhccccccc-cCchHHHH-HHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhh--cCccee
Confidence 344456788888887 78887765 567888888888887 67888888999999999999888 8888776 346888
Q ss_pred EEccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCcc
Q 037315 248 LALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHL 327 (693)
Q Consensus 248 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~ 327 (693)
|-+++|+++. .|..++..+.|..|+.+.|.+. .+|..+.++.+|+.|.+..|.+. ..|+.+..+ .|.+||++.|++
T Consensus 148 li~sNNkl~~-lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 148 LIVSNNKLTS-LPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred EEEecCcccc-CCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCce
Confidence 8888888876 4666778888888999988888 56667888888888888888887 556666644 478888888888
Q ss_pred ccCccccccCCCCCCEEECcCCcCC
Q 037315 328 EGPIPVEFCHLYSLQILDISDNNIS 352 (693)
Q Consensus 328 ~~~~~~~~~~l~~L~~L~l~~n~~~ 352 (693)
. .+|..|.++..|++|-|.+|.+.
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCC
Confidence 7 67788888889999999888886
No 39
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.95 E-value=4.1e-10 Score=82.54 Aligned_cols=61 Identities=49% Similarity=0.657 Sum_probs=58.0
Q ss_pred cCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccc
Q 037315 512 SLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKL 572 (693)
Q Consensus 512 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 572 (693)
|+|++|++++|++....+..|.++++|++|++++|.++.+.++.|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4799999999999988888999999999999999999999999999999999999999986
No 40
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.86 E-value=2.2e-09 Score=120.36 Aligned_cols=127 Identities=26% Similarity=0.274 Sum_probs=76.1
Q ss_pred CCcEEEccCCcccccCCccCCCCCCCCEEEcccCc--cccccchHHhhCCCCCcEEEccccccccccCccCCCCCCCCeE
Q 037315 195 RLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQ--LTGEIPEHLAMGCVNLEFLALSNNSLKGHMFSRNFNLINLRWL 272 (693)
Q Consensus 195 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~--l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 272 (693)
..+...+-+|.+. ..+... ..+.|++|-+.+|. +. .++..+|..++.|++||+++|.-.+..|..++.+-+|++|
T Consensus 524 ~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 524 SVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred heeEEEEeccchh-hccCCC-CCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 4455555555543 222222 23356666666664 33 5666666666777777777666555566666666777777
Q ss_pred eccCccccccCCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCC
Q 037315 273 QLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKN 325 (693)
Q Consensus 273 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n 325 (693)
+++++.+. .+|..+..+..|.+|++..+......+.....+++|++|.+..-
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 77776666 56666666677777777666544444555555666666666544
No 41
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.81 E-value=5e-09 Score=117.56 Aligned_cols=316 Identities=22% Similarity=0.222 Sum_probs=156.7
Q ss_pred CCCCEEEccCccccccCchhhhhcCCCCCEEEccCCc--ccccCCCCCCCCCCCCEEEccCCcCcccCChhhhhcCCCCc
Q 037315 120 HDLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDS--LAGPFRLPIHSHRHLRLLDVSNNNFQGHIPVEIGDILPRLI 197 (693)
Q Consensus 120 ~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~--~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 197 (693)
...+...+.++.+.. ++.. ..+++|++|-+.+|. +.......|..++.|++||+++|.--+.+|..+++ +-+|+
T Consensus 523 ~~~rr~s~~~~~~~~-~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~-Li~Lr 598 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEH-IAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGE-LVHLR 598 (889)
T ss_pred hheeEEEEeccchhh-ccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhh-hhhhh
Confidence 345555555554432 2222 345577777777774 44333444667778888888877655577777776 56788
Q ss_pred EEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEcccccc--ccccCccCCCCCCCCeEecc
Q 037315 198 SFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSL--KGHMFSRNFNLINLRWLQLE 275 (693)
Q Consensus 198 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l--~~~~~~~~~~l~~L~~L~L~ 275 (693)
+|+++++.+. .+|..+.+++.|.+|++..+.....+ ..+...+.+|++|.+..... .......+..+.+|+.+...
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~-~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESI-PGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccc-cchhhhcccccEEEeeccccccchhhHHhhhcccchhhheee
Confidence 8888888777 67777888888888888777654333 33334577888887765431 12222333445555555553
Q ss_pred CccccccCCcCCcCCCCCC----EEeccCCcccccCCccccCCCCCcEEEccCCccccCccccccC------CCCCCEEE
Q 037315 276 GNHFVGEIPQSLSKCSSLE----GLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCH------LYSLQILD 345 (693)
Q Consensus 276 ~n~l~~~~~~~l~~l~~L~----~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~------l~~L~~L~ 345 (693)
..... +-..+..+..|. .+.+.++... ..+..+..+.+|+.|.+.++.+.......... ++++..+.
T Consensus 677 ~~s~~--~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~ 753 (889)
T KOG4658|consen 677 ISSVL--LLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVS 753 (889)
T ss_pred cchhH--hHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHH
Confidence 33220 001122222222 2222222221 33445566677777777777665322211111 12222223
Q ss_pred CcCCcCCCCCCCCCCCCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCC-cchhhhCCCCCCEEEccCCccc
Q 037315 346 ISDNNISGSLPSCFHPLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGS-IPDWIDGLSQLSHLILGNNNLE 424 (693)
Q Consensus 346 l~~n~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~ 424 (693)
+.++............++|+.|.+..+.....+.. ....+..++.+.+..+.+.+. .-...++++++..+.+..=.+.
T Consensus 754 ~~~~~~~r~l~~~~f~~~L~~l~l~~~~~~e~~i~-~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~~~l~ 832 (889)
T KOG4658|consen 754 ILNCHMLRDLTWLLFAPHLTSLSLVSCRLLEDIIP-KLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSFLKLE 832 (889)
T ss_pred hhccccccccchhhccCcccEEEEecccccccCCC-HHHHhhhcccEEecccccccceeeecCCCCceeEecccCccchh
Confidence 33332222222223356666666666655443332 333344444444444444332 1223333444444433332222
Q ss_pred ccCC---cccCCCCCCCEEEccCC
Q 037315 425 GEVP---VQLCGLNQLQLLDLSNN 445 (693)
Q Consensus 425 ~~~~---~~~~~l~~L~~L~l~~n 445 (693)
.... ..+..+|.+..+.+.+|
T Consensus 833 ~~~ve~~p~l~~~P~~~~~~i~~~ 856 (889)
T KOG4658|consen 833 ELIVEECPKLGKLPLLSTLTIVGC 856 (889)
T ss_pred heehhcCcccccCccccccceecc
Confidence 1111 11234555555555554
No 42
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.79 E-value=8.1e-10 Score=116.12 Aligned_cols=245 Identities=25% Similarity=0.250 Sum_probs=129.3
Q ss_pred CCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEccccccccccCccCCCCCCCCeEe
Q 037315 194 PRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGHMFSRNFNLINLRWLQ 273 (693)
Q Consensus 194 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 273 (693)
..++.+++..|.+.. ....+..+++|+.|++.+|.+. .+...+ ..+++|++|++++|.|+.+ ..+..++.|+.|+
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l-~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLL-SSLVNLQVLDLSFNKITKL--EGLSTLTLLKELN 146 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccch-hhhhcchheeccccccccc--cchhhccchhhhe
Confidence 344444455554442 1223445555566666666555 333311 1255666666666666553 2233445566666
Q ss_pred ccCccccccCCcCCcCCCCCCEEeccCCcccccCC-ccccCCCCCcEEEccCCccccCccccccCCCCCCEEECcCCcCC
Q 037315 274 LEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKIP-RWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSLQILDISDNNIS 352 (693)
Q Consensus 274 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~-~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~~~ 352 (693)
+++|.+... ..+..++.|+.+++++|.+....+ . ...+..++.+.+.+|.+... ..+..+..+..+++..|.+.
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccce
Confidence 666665532 234445566666666666553322 1 34555666666666665433 22333334444455555554
Q ss_pred CCCCCCCCCC--cccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCccccc---C
Q 037315 353 GSLPSCFHPL--SITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGE---V 427 (693)
Q Consensus 353 ~~~~~~~~~~--~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~---~ 427 (693)
.. ....... .|+.+++++|.+.... ..+..+..+..+++.+|.+... ..+...+.+..+....+.+... .
T Consensus 222 ~~-~~l~~~~~~~L~~l~l~~n~i~~~~--~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (414)
T KOG0531|consen 222 KL-EGLNELVMLHLRELYLSGNRISRSP--EGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAIS 296 (414)
T ss_pred ec-cCcccchhHHHHHHhcccCcccccc--ccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhh
Confidence 22 2222222 2566666666653321 1456677888888888877633 2345556666677777765521 1
Q ss_pred Cc-ccCCCCCCCEEEccCCcCcccCCC
Q 037315 428 PV-QLCGLNQLQLLDLSNNNLHGLIPP 453 (693)
Q Consensus 428 ~~-~~~~l~~L~~L~l~~n~~~~~~~~ 453 (693)
.. .....+.++...+..|++....+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 297 QEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred ccccccccccccccccccCcccccccc
Confidence 11 145667888888888877665443
No 43
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.66 E-value=4.9e-10 Score=103.92 Aligned_cols=157 Identities=24% Similarity=0.241 Sum_probs=78.4
Q ss_pred CCCEEEccCccccccCchhhhhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCc-CcccCChhhhhcCCCCcEE
Q 037315 121 DLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDSLAGPFRLPIHSHRHLRLLDVSNNN-FQGHIPVEIGDILPRLISF 199 (693)
Q Consensus 121 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~-~~~~~~~~~~~~l~~L~~L 199 (693)
.|+++||+...++..--..+++.|.+|+.|.+.++.+.+.+...+....+|+.|+++.+. ++......+.+.++.|.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 466666666665544334445666777777777777666666666666677777776653 3322222334446666667
Q ss_pred EccCCcccccCCc-cCCC-CCCCCEEEcccCccc--cccchHHhhCCCCCcEEEccccc-cccccCccCCCCCCCCeEec
Q 037315 200 NISMNALDGSIPS-SFGN-MNLLQILDLSNNQLT--GEIPEHLAMGCVNLEFLALSNNS-LKGHMFSRNFNLINLRWLQL 274 (693)
Q Consensus 200 ~L~~n~i~~~~~~-~~~~-l~~L~~L~L~~n~l~--~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L 274 (693)
++++|......-. .+.+ -++|..|+++++.-. ..--..+.+.+++|.+|||+.|. ++......|.+++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 7766654421110 1111 134555666554311 00011122345555555555432 22222333444555555555
Q ss_pred cCc
Q 037315 275 EGN 277 (693)
Q Consensus 275 ~~n 277 (693)
+.|
T Consensus 346 sRC 348 (419)
T KOG2120|consen 346 SRC 348 (419)
T ss_pred hhh
Confidence 544
No 44
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.55 E-value=1.8e-09 Score=100.25 Aligned_cols=176 Identities=22% Similarity=0.191 Sum_probs=116.7
Q ss_pred CCCeEeccCcccccc-CCcCCcCCCCCCEEeccCCcccccCCccccCCCCCcEEEccCCccccCc--cccccCCCCCCEE
Q 037315 268 NLRWLQLEGNHFVGE-IPQSLSKCSSLEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPI--PVEFCHLYSLQIL 344 (693)
Q Consensus 268 ~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~--~~~~~~l~~L~~L 344 (693)
.|+++||++..++.. +...++.|.+|+.|.+.++.+.+.+...++.-.+|+.++++.+.--... .-.+.+|+.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 467777776665521 1233556677777777777777666666777777777777766432111 1225678888888
Q ss_pred ECcCCcCCCCCCC-CCC--CCcccEEEccCcccc---cccCcccccCCCCCcEEeCcCcc-cCCCcchhhhCCCCCCEEE
Q 037315 345 DISDNNISGSLPS-CFH--PLSITQVHLSKNMLH---GQLKGGTFFNCSSLVTLDLSYNL-LNGSIPDWIDGLSQLSHLI 417 (693)
Q Consensus 345 ~l~~n~~~~~~~~-~~~--~~~L~~L~l~~n~~~---~~~~~~~~~~~~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~ 417 (693)
+++.|........ ..+ .++++.|+++++.-. ..+.. ....||+|.+|||++|. ++......|..++.|++|.
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~t-L~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLST-LVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHH-HHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 8888876543321 111 567888888887431 11111 34579999999999974 4444455677899999999
Q ss_pred ccCCcccccCCc---ccCCCCCCCEEEccCCc
Q 037315 418 LGNNNLEGEVPV---QLCGLNQLQLLDLSNNN 446 (693)
Q Consensus 418 L~~n~l~~~~~~---~~~~l~~L~~L~l~~n~ 446 (693)
++.|... +|. .+...|+|.+|++.++-
T Consensus 345 lsRCY~i--~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 345 LSRCYDI--IPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred hhhhcCC--ChHHeeeeccCcceEEEEecccc
Confidence 9999753 443 36778999999998763
No 45
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.54 E-value=7.8e-09 Score=107.32 Aligned_cols=110 Identities=27% Similarity=0.326 Sum_probs=88.4
Q ss_pred cccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCcccccCCCCCEE
Q 037315 510 VLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVF 589 (693)
Q Consensus 510 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 589 (693)
.++.++.|+|++|+++.. ..+..++.|++|||+.|.+..++--...++. |+.|.+++|.++.. .++.++.+|+.|
T Consensus 185 ll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~LksL~~L 259 (1096)
T KOG1859|consen 185 LLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLKSLYGL 259 (1096)
T ss_pred HHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHHhhhhhhcc
Confidence 377899999999999855 4889999999999999999977544555555 99999999999743 467899999999
Q ss_pred ecCCCcCcccCC-CCccccCcCCcccccCccCCCCC
Q 037315 590 SVAYNNLSGEIP-EWKAQFATFNENSYEGNTFLCGL 624 (693)
Q Consensus 590 ~l~~N~l~~~~p-~~~~~~~~l~~~~~~~n~~~c~~ 624 (693)
|+++|-+.+--. +.+..+..+..+.++|||..|..
T Consensus 260 DlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 260 DLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred chhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 999998875211 11235667788899999999973
No 46
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.43 E-value=2.7e-09 Score=110.67 Aligned_cols=128 Identities=29% Similarity=0.256 Sum_probs=86.9
Q ss_pred CCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCCCcccCccccccCC
Q 037315 387 SSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPPCFDNTKLHESYNN 466 (693)
Q Consensus 387 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~~ 466 (693)
-.|...+.+.|.+. .....++-++.|+.|+|++|+++... .+..++.|++|||+.|.+...+--....
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~g--------- 231 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVG--------- 231 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhh---------
Confidence 35677777888876 56667777888888888888887433 6778888888888888876433221111
Q ss_pred CCCCchhhhHhhhhcccCCcccccccceeeeecccceeeeccccccCcceEECCCCcccccCchhhccCCCCCeeeCCCc
Q 037315 467 SSSPDEQFKILFSIKGHQGHVEKKIQEFFEFTTKNIAYIFQGKVLSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHN 546 (693)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n 546 (693)
..|+.|.+++|.++.. ..+.++.+|+.||++.|
T Consensus 232 ---------------------------------------------c~L~~L~lrnN~l~tL--~gie~LksL~~LDlsyN 264 (1096)
T KOG1859|consen 232 ---------------------------------------------CKLQLLNLRNNALTTL--RGIENLKSLYGLDLSYN 264 (1096)
T ss_pred ---------------------------------------------hhheeeeecccHHHhh--hhHHhhhhhhccchhHh
Confidence 1377777888877644 45677777888888887
Q ss_pred cCCccCc-ccccCCCCCCEEeCCCcccc
Q 037315 547 NLTGLIP-STFSNLKQIESLDLSYNKLN 573 (693)
Q Consensus 547 ~l~~~~~-~~~~~l~~L~~L~Ls~N~l~ 573 (693)
-|.+... .-+..+..|+.|+|.+|++-
T Consensus 265 ll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 265 LLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7765421 22344567777778887775
No 47
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=7e-08 Score=89.88 Aligned_cols=82 Identities=21% Similarity=0.216 Sum_probs=53.3
Q ss_pred CCcccEEEccCcccccccCcccccCCCCCcEEeCcCcccCCC-cchhhhCCCCCCEEEccCCcccccCCc------ccCC
Q 037315 361 PLSITQVHLSKNMLHGQLKGGTFFNCSSLVTLDLSYNLLNGS-IPDWIDGLSQLSHLILGNNNLEGEVPV------QLCG 433 (693)
Q Consensus 361 ~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~------~~~~ 433 (693)
++++..+.+..|.+.+.-....+..+|.+..|+|+.++|..- .-+++.+++.|+.|.++++++.+..-. .++.
T Consensus 198 Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaR 277 (418)
T KOG2982|consen 198 FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIAR 277 (418)
T ss_pred cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEee
Confidence 455666666666665555555666677777888888887642 224677788888888888887643321 1456
Q ss_pred CCCCCEEEc
Q 037315 434 LNQLQLLDL 442 (693)
Q Consensus 434 l~~L~~L~l 442 (693)
+++++.|+=
T Consensus 278 L~~v~vLNG 286 (418)
T KOG2982|consen 278 LTKVQVLNG 286 (418)
T ss_pred ccceEEecC
Confidence 677776653
No 48
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.31 E-value=8.5e-08 Score=89.35 Aligned_cols=82 Identities=16% Similarity=0.214 Sum_probs=50.0
Q ss_pred ccCcceEECCCCccccc-CchhhccCCCCCeeeCCCccCCccC-cccccCCCCCCEEeCCCccccccCCc------cccc
Q 037315 511 LSLLSGLDLSCNKLIGH-IPPQVGNLTRIQTLNLSHNNLTGLI-PSTFSNLKQIESLDLSYNKLNGKIPH------QLVE 582 (693)
Q Consensus 511 l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~------~l~~ 582 (693)
++++..+-+-.|++... ..+.+..++.+..|+|+.|+|.+-. -+.+.++++|..|.+++|++...+.. .++.
T Consensus 198 Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaR 277 (418)
T KOG2982|consen 198 FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIAR 277 (418)
T ss_pred cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEee
Confidence 45566666666655432 2234556666667777777776542 25667777788888888877643321 2456
Q ss_pred CCCCCEEecC
Q 037315 583 LKELAVFSVA 592 (693)
Q Consensus 583 l~~L~~L~l~ 592 (693)
+++++.|+=+
T Consensus 278 L~~v~vLNGs 287 (418)
T KOG2982|consen 278 LTKVQVLNGS 287 (418)
T ss_pred ccceEEecCc
Confidence 7777777644
No 49
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.19 E-value=7.6e-08 Score=79.08 Aligned_cols=87 Identities=22% Similarity=0.330 Sum_probs=48.6
Q ss_pred CcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCcccccCCCCCEEecC
Q 037315 513 LLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVFSVA 592 (693)
Q Consensus 513 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~ 592 (693)
.++.|++++|.+. .+|..+..++.|+.|+++.|.+... |..+..+.++-.||..+|.+. .+|..+.--......++.
T Consensus 78 t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~~~-p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lg 154 (177)
T KOG4579|consen 78 TATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLNAE-PRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLG 154 (177)
T ss_pred hhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccccc-hHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhc
Confidence 4556666666666 4555566666677777766666643 445555666666666666665 333332222223333445
Q ss_pred CCcCcccCCC
Q 037315 593 YNNLSGEIPE 602 (693)
Q Consensus 593 ~N~l~~~~p~ 602 (693)
++++.+..|.
T Consensus 155 nepl~~~~~~ 164 (177)
T KOG4579|consen 155 NEPLGDETKK 164 (177)
T ss_pred CCcccccCcc
Confidence 5566555544
No 50
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.17 E-value=3.9e-08 Score=95.97 Aligned_cols=156 Identities=21% Similarity=0.083 Sum_probs=82.1
Q ss_pred hcCCCCcEEEccCCccc-ccCCcc-CCCCCCCCEEEcccCc-cccccchHHhhCCCCCcEEEccccccccc--cCccCCC
Q 037315 191 DILPRLISFNISMNALD-GSIPSS-FGNMNLLQILDLSNNQ-LTGEIPEHLAMGCVNLEFLALSNNSLKGH--MFSRNFN 265 (693)
Q Consensus 191 ~~l~~L~~L~L~~n~i~-~~~~~~-~~~l~~L~~L~L~~n~-l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~~~ 265 (693)
..+..|+.|+.+++.-. +..-.+ -.+..+|+.|.++.++ +++.--..+..+++.|+.+++..+..... ....-.+
T Consensus 291 ~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~ 370 (483)
T KOG4341|consen 291 CGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRN 370 (483)
T ss_pred hhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccC
Confidence 33455666666555321 111111 2245666666666654 22122223344566777777766643321 2222336
Q ss_pred CCCCCeEeccCccccccC-----CcCCcCCCCCCEEeccCCccc-ccCCccccCCCCCcEEEccCCccccCcc--ccccC
Q 037315 266 LINLRWLQLEGNHFVGEI-----PQSLSKCSSLEGLYLNNNSLS-GKIPRWLGNLTWLIHIIMPKNHLEGPIP--VEFCH 337 (693)
Q Consensus 266 l~~L~~L~L~~n~l~~~~-----~~~l~~l~~L~~L~L~~n~i~-~~~~~~l~~l~~L~~L~l~~n~~~~~~~--~~~~~ 337 (693)
++.|+.+.+++|...... ...-..+..++.+.+++++.. +...+.+..+++|+.+++-+++-....+ ..-.+
T Consensus 371 C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~vtk~~i~~~~~~ 450 (483)
T KOG4341|consen 371 CPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQDVTKEAISRFATH 450 (483)
T ss_pred CchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhhhhhhhhHHHHhh
Confidence 677777777777543221 112234567888888888654 3344566778888888888876432211 12245
Q ss_pred CCCCCEEEC
Q 037315 338 LYSLQILDI 346 (693)
Q Consensus 338 l~~L~~L~l 346 (693)
+|++++..+
T Consensus 451 lp~i~v~a~ 459 (483)
T KOG4341|consen 451 LPNIKVHAY 459 (483)
T ss_pred Cccceehhh
Confidence 666665543
No 51
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.13 E-value=6.4e-07 Score=82.54 Aligned_cols=69 Identities=16% Similarity=0.257 Sum_probs=33.0
Q ss_pred CCCCCCEEECCCCCCCCc----CCccccCCCCCCCEEECCCCcC---cCcCC------cccccCCCCCcEEEccCCcccc
Q 037315 16 NMTSLRILDVSSNQLTGS----ISSSPLFYLTSIEELSLSNNHF---HIPIS------LEPLFNHSRLKIFYADNNPINA 82 (693)
Q Consensus 16 ~l~~L~~L~Ls~n~l~~~----l~~~~~~~l~~L~~L~Ls~n~~---~~~~~------~~~~~~l~~L~~L~l~~n~~~~ 82 (693)
.+..++.+|||+|-|... +.. .+..-.+|+..++|.-.. .+.++ ..++.+|++|+..++|.|.+..
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~-~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~ 106 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCN-VIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGS 106 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHH-HHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCc
Confidence 355666666666666421 111 233345666666664321 01111 1234555666666666665544
Q ss_pred ccc
Q 037315 83 KIT 85 (693)
Q Consensus 83 ~~~ 85 (693)
..+
T Consensus 107 ~~~ 109 (388)
T COG5238 107 EFP 109 (388)
T ss_pred ccc
Confidence 333
No 52
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.10 E-value=8.6e-08 Score=93.67 Aligned_cols=236 Identities=17% Similarity=0.119 Sum_probs=147.0
Q ss_pred cCCCCCCEEEccCcc-ccccCchhhhhcCCCCCEEEccCCc-ccccCCC-CCCCCCCCCEEEccCCcCcc-cCChhhhhc
Q 037315 117 YYQHDLEDVHFSRIQ-MNGEFPNWLLENNTKLRQLSLVNDS-LAGPFRL-PIHSHRHLRLLDVSNNNFQG-HIPVEIGDI 192 (693)
Q Consensus 117 ~~~~~L~~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~-~~~~~~~-~l~~~~~L~~L~l~~n~~~~-~~~~~~~~~ 192 (693)
.++++|+++++..|. +++..-..+...+++|+++++++|. +++.... ...+++.++.+...+|.-.+ +.-......
T Consensus 187 ~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~ 266 (483)
T KOG4341|consen 187 RYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAY 266 (483)
T ss_pred HhcchhhhhhhcccchhHHHHHHHHHHhhhhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhcc
Confidence 467788888888753 4443334455778999999999883 4442222 23456667777777663211 111112233
Q ss_pred CCCCcEEEccCCcc-cccC-CccCCCCCCCCEEEcccCcc-ccccchHHhhCCCCCcEEEcccccc-ccccCccC-CCCC
Q 037315 193 LPRLISFNISMNAL-DGSI-PSSFGNMNLLQILDLSNNQL-TGEIPEHLAMGCVNLEFLALSNNSL-KGHMFSRN-FNLI 267 (693)
Q Consensus 193 l~~L~~L~L~~n~i-~~~~-~~~~~~l~~L~~L~L~~n~l-~~~~~~~~~~~l~~L~~L~l~~n~l-~~~~~~~~-~~l~ 267 (693)
.+.+..+++.+|.. ++.. ...-..+.+|++|+.+++.- ++.+-..+..++.+|+.|.++.|+- +......+ .+++
T Consensus 267 ~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~ 346 (483)
T KOG4341|consen 267 CLEILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCP 346 (483)
T ss_pred ChHhhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCCh
Confidence 55677788777743 2211 01123467899999988753 3233345556789999999999873 33222222 3678
Q ss_pred CCCeEeccCcccccc--CCcCCcCCCCCCEEeccCCcccccC-----CccccCCCCCcEEEccCCcccc-CccccccCCC
Q 037315 268 NLRWLQLEGNHFVGE--IPQSLSKCSSLEGLYLNNNSLSGKI-----PRWLGNLTWLIHIIMPKNHLEG-PIPVEFCHLY 339 (693)
Q Consensus 268 ~L~~L~L~~n~l~~~--~~~~l~~l~~L~~L~L~~n~i~~~~-----~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~ 339 (693)
.|+.+++..+..... +...-.+++.|+.+.+++|...... ...-..+..+..+.++++.... ..-..+..++
T Consensus 347 ~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~ 426 (483)
T KOG4341|consen 347 HLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICR 426 (483)
T ss_pred hhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCc
Confidence 999999999865422 2223356889999999988653221 1122346678899999987643 2334467788
Q ss_pred CCCEEECcCCcCC
Q 037315 340 SLQILDISDNNIS 352 (693)
Q Consensus 340 ~L~~L~l~~n~~~ 352 (693)
+|+.+++.+++-.
T Consensus 427 ~Leri~l~~~q~v 439 (483)
T KOG4341|consen 427 NLERIELIDCQDV 439 (483)
T ss_pred ccceeeeechhhh
Confidence 9999999888653
No 53
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.05 E-value=9e-07 Score=81.59 Aligned_cols=87 Identities=21% Similarity=0.138 Sum_probs=41.6
Q ss_pred CCCCcEEEccccccccc----cCccCCCCCCCCeEeccCccccccCCcC----C--cCCCCCCEEeccCCcccccCCcc-
Q 037315 242 CVNLEFLALSNNSLKGH----MFSRNFNLINLRWLQLEGNHFVGEIPQS----L--SKCSSLEGLYLNNNSLSGKIPRW- 310 (693)
Q Consensus 242 l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~----l--~~l~~L~~L~L~~n~i~~~~~~~- 310 (693)
+.+|+.||+..|-++.. ....+...+.|+.|.+.+|-++...... | ...++|..|...+|.+.+.....
T Consensus 213 ~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~ 292 (388)
T COG5238 213 SHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDI 292 (388)
T ss_pred hCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeee
Confidence 45566666665554422 1222334455666666666554322211 1 12355666666666543221111
Q ss_pred ------ccCCCCCcEEEccCCccc
Q 037315 311 ------LGNLTWLIHIIMPKNHLE 328 (693)
Q Consensus 311 ------l~~l~~L~~L~l~~n~~~ 328 (693)
-..++-|..+.+.+|++.
T Consensus 293 ~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 293 SLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred chhhhhhcccHHHHHHHHccCcch
Confidence 123555666666667665
No 54
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.03 E-value=4.2e-06 Score=55.78 Aligned_cols=37 Identities=41% Similarity=0.552 Sum_probs=29.1
Q ss_pred CCCCEEECCCCCCCCcCCccccCCCCCCCEEECCCCcCc
Q 037315 18 TSLRILDVSSNQLTGSISSSPLFYLTSIEELSLSNNHFH 56 (693)
Q Consensus 18 ~~L~~L~Ls~n~l~~~l~~~~~~~l~~L~~L~Ls~n~~~ 56 (693)
++|++|++++|+|+ .+|. .+++|++|++|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~-~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPP-ELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGG-HGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCc-hHhCCCCCCEEEecCCCCC
Confidence 57888888888888 7776 6888888888888888876
No 55
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.97 E-value=1.4e-05 Score=70.89 Aligned_cols=124 Identities=27% Similarity=0.284 Sum_probs=73.8
Q ss_pred CEEEccCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEcc
Q 037315 172 RLLDVSNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALS 251 (693)
Q Consensus 172 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~ 251 (693)
+.+++.+.++. .+ ..++....+...+++++|.+.. ...|..++.|.+|.+.+|+|+ .|...+...+++|+.|.+.
T Consensus 22 ~e~~LR~lkip-~i-enlg~~~d~~d~iDLtdNdl~~--l~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~Lt 96 (233)
T KOG1644|consen 22 RELDLRGLKIP-VI-ENLGATLDQFDAIDLTDNDLRK--LDNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILT 96 (233)
T ss_pred ccccccccccc-ch-hhccccccccceecccccchhh--cccCCCccccceEEecCCcce-eeccchhhhccccceEEec
Confidence 45566665553 11 1233334567777888887752 235677778888888888887 6666665557778888888
Q ss_pred cccccccc-CccCCCCCCCCeEeccCccccccCC---cCCcCCCCCCEEeccC
Q 037315 252 NNSLKGHM-FSRNFNLINLRWLQLEGNHFVGEIP---QSLSKCSSLEGLYLNN 300 (693)
Q Consensus 252 ~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~L~~ 300 (693)
+|++.... ...+..+|+|++|.+-+|.+...-- ..+..+++|+.||..+
T Consensus 97 nNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 97 NNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred CcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhh
Confidence 77776432 1234556666666666666553211 1234455555555554
No 56
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.93 E-value=6.5e-06 Score=54.86 Aligned_cols=36 Identities=42% Similarity=0.722 Sum_probs=16.7
Q ss_pred CCCeeeCCCccCCccCcccccCCCCCCEEeCCCcccc
Q 037315 537 RIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLN 573 (693)
Q Consensus 537 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 573 (693)
+|++|++++|+|+.+ |..++++++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~~l-~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITDL-PPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SSH-GGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCccc-CchHhCCCCCCEEEecCCCCC
Confidence 445555555555543 223455555555555555554
No 57
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.87 E-value=8.5e-07 Score=73.07 Aligned_cols=87 Identities=23% Similarity=0.398 Sum_probs=51.4
Q ss_pred CCCCCCEEEccCCcCcccCChhhhhcCCCCcEEEccCCcccccCCccCCCCCCCCEEEcccCccccccchHHhhCCCCCc
Q 037315 167 SHRHLRLLDVSNNNFQGHIPVEIGDILPRLISFNISMNALDGSIPSSFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLE 246 (693)
Q Consensus 167 ~~~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 246 (693)
....|+..++++|.+. .+|..+...+|.++.|++++|.|. .+|..++.++.|+.|+++.|.+. ..|..++. +.++-
T Consensus 51 ~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~-L~~l~ 126 (177)
T KOG4579|consen 51 KGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAP-LIKLD 126 (177)
T ss_pred CCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHH-HHhHH
Confidence 3345555666666665 566665555556666666666665 34555666666666666666665 55555553 55566
Q ss_pred EEEcccccccc
Q 037315 247 FLALSNNSLKG 257 (693)
Q Consensus 247 ~L~l~~n~l~~ 257 (693)
.|+..+|.+..
T Consensus 127 ~Lds~~na~~e 137 (177)
T KOG4579|consen 127 MLDSPENARAE 137 (177)
T ss_pred HhcCCCCcccc
Confidence 66655555443
No 58
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.79 E-value=5.6e-05 Score=76.39 Aligned_cols=54 Identities=17% Similarity=0.157 Sum_probs=26.5
Q ss_pred CCCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCC
Q 037315 386 CSSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNN 445 (693)
Q Consensus 386 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 445 (693)
+.+++.|++++|.++ .+|. -.++|++|.+++|.-....|..+ .++|+.|++++|
T Consensus 51 ~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 51 ARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred hcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 455666666666554 2331 11246666665544333444333 245666666665
No 59
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.76 E-value=6.8e-05 Score=64.73 Aligned_cols=122 Identities=19% Similarity=0.231 Sum_probs=41.1
Q ss_pred cCCCCCCCCEEEcccCccccccchHHhhCCCCCcEEEccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCC
Q 037315 213 SFGNMNLLQILDLSNNQLTGEIPEHLAMGCVNLEFLALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSS 292 (693)
Q Consensus 213 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 292 (693)
.|.++++|+.+.+.. .+. .++...|.++++|+.+.+..+ +..+....|.++++++.+.+.+ .+.......|..+++
T Consensus 7 ~F~~~~~l~~i~~~~-~~~-~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIK-KIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTT-TT--EEEETS-T---EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHhCCCCCCEEEECC-Cee-EeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccc
Confidence 344444455544442 233 444444444444555554442 4443444444444455555543 222223334444555
Q ss_pred CCEEeccCCcccccCCccccCCCCCcEEEccCCccccCccccccCCCCC
Q 037315 293 LEGLYLNNNSLSGKIPRWLGNLTWLIHIIMPKNHLEGPIPVEFCHLYSL 341 (693)
Q Consensus 293 L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 341 (693)
++.+++..+ +.......+.++ .++.+.+.. .+.......|.++++|
T Consensus 83 l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 83 LKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp ECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred ccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 555555443 332333444444 555555543 2222334445555544
No 60
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.75 E-value=4.9e-05 Score=67.46 Aligned_cols=104 Identities=23% Similarity=0.177 Sum_probs=45.8
Q ss_pred CCcEEEccccccccccCccCCCCCCCCeEeccCccccccCCcCCcCCCCCCEEeccCCcccccC-CccccCCCCCcEEEc
Q 037315 244 NLEFLALSNNSLKGHMFSRNFNLINLRWLQLEGNHFVGEIPQSLSKCSSLEGLYLNNNSLSGKI-PRWLGNLTWLIHIIM 322 (693)
Q Consensus 244 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~-~~~l~~l~~L~~L~l 322 (693)
+...+|+++|.+... ..|..++.|.+|.+.+|+|+.+.|.--..+++|+.|.+.+|.+.... ...+..++.|++|.+
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 344444444444331 23334444555555555554443332233444555555555443211 122334455555555
Q ss_pred cCCccccCcc---ccccCCCCCCEEECcCC
Q 037315 323 PKNHLEGPIP---VEFCHLYSLQILDISDN 349 (693)
Q Consensus 323 ~~n~~~~~~~---~~~~~l~~L~~L~l~~n 349 (693)
-+|.+...-- ..+..+|+|+.||..+-
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehhhh
Confidence 5554432111 12445666666666543
No 61
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.74 E-value=1.2e-05 Score=88.31 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=8.9
Q ss_pred CCCCcEEEcccccccc
Q 037315 242 CVNLEFLALSNNSLKG 257 (693)
Q Consensus 242 l~~L~~L~l~~n~l~~ 257 (693)
+|+|+.||.|++.+..
T Consensus 249 LpeLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 249 LPELRFLDCSGTDINE 264 (699)
T ss_pred CccccEEecCCcchhH
Confidence 5566666666555443
No 62
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.73 E-value=8.7e-05 Score=64.08 Aligned_cols=63 Identities=17% Similarity=0.298 Sum_probs=31.2
Q ss_pred cccccCCCCCcEEeCcCcccCCCcchhhhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccC
Q 037315 380 GGTFFNCSSLVTLDLSYNLLNGSIPDWIDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSN 444 (693)
Q Consensus 380 ~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 444 (693)
..+|.++++|+.+.+.. .+..+....|.++++|+.+.+.++ +.......|.++++++.+.+.+
T Consensus 5 ~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~ 67 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN 67 (129)
T ss_dssp TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS
T ss_pred HHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc
Confidence 34666677777777664 344445556666666777776654 5444455566666666666644
No 63
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.62 E-value=0.0002 Score=72.54 Aligned_cols=43 Identities=26% Similarity=0.402 Sum_probs=31.6
Q ss_pred hhCCCCCCEEEccCCcccccCCcccCCCCCCCEEEccCCcCcccCCC
Q 037315 407 IDGLSQLSHLILGNNNLEGEVPVQLCGLNQLQLLDLSNNNLHGLIPP 453 (693)
Q Consensus 407 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 453 (693)
+..+.+++.|++++|.++ .+|. + .++|+.|.+++|.-....|.
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsnc~nLtsLP~ 90 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV-L--PNELTEITIENCNNLTTLPG 90 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccCCCCcccCCc
Confidence 455789999999999888 4452 2 34799999999765545554
No 64
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.49 E-value=3.3e-05 Score=85.05 Aligned_cols=135 Identities=19% Similarity=0.209 Sum_probs=88.4
Q ss_pred CCCcEEEccCCc-cccccccccCCCCCCccccEEecCCCCCC-CCcCchhhcCCCCCCEEEccCccccccCchhhhhcCC
Q 037315 68 SRLKIFYADNNP-INAKITKSHTLTTPKFQLASLSLSSSYGD-GVTFPKFLYYQHDLEDVHFSRIQMNGEFPNWLLENNT 145 (693)
Q Consensus 68 ~~L~~L~l~~n~-~~~~~~~~~~~~~~~~~L~~L~L~~~~~~-~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 145 (693)
.+|++|++++.. +...++...+..+| +|+.|.+ .+... ...+.....++++|..||++++++... .. .++++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LP--sL~sL~i-~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~G-IS~Lk 195 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLP--SLRSLVI-SGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SG-ISRLK 195 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCc--ccceEEe-cCceecchhHHHHhhccCccceeecCCCCccCc--HH-Hhccc
Confidence 678888888755 33344444444444 7888888 44333 333444556788899999998887754 23 36788
Q ss_pred CCCEEEccCCcccc-cCCCCCCCCCCCCEEEccCCcCcccCCh------hhhhcCCCCcEEEccCCccccc
Q 037315 146 KLRQLSLVNDSLAG-PFRLPIHSHRHLRLLDVSNNNFQGHIPV------EIGDILPRLISFNISMNALDGS 209 (693)
Q Consensus 146 ~L~~L~l~~~~~~~-~~~~~l~~~~~L~~L~l~~n~~~~~~~~------~~~~~l~~L~~L~L~~n~i~~~ 209 (693)
+|++|.+.+-.+.. .....+..+++|++||+|..+.. ..+. +.+..+|+|+.||.+++.+.+.
T Consensus 196 nLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~-~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 196 NLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNN-DDTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred cHHHHhccCCCCCchhhHHHHhcccCCCeeeccccccc-cchHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 88888887766653 22234667889999999887654 2222 1234478999999998877643
No 65
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.28 E-value=1.8e-05 Score=85.98 Aligned_cols=36 Identities=25% Similarity=0.111 Sum_probs=17.9
Q ss_pred CcEEeCcCcccCCC-cchhhhC-CCCCCEEEccCCccc
Q 037315 389 LVTLDLSYNLLNGS-IPDWIDG-LSQLSHLILGNNNLE 424 (693)
Q Consensus 389 L~~L~L~~n~i~~~-~~~~~~~-l~~L~~L~L~~n~l~ 424 (693)
++.|+++.+..... .-..... +.+++.+++.++...
T Consensus 403 l~~L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~~ 440 (482)
T KOG1947|consen 403 LRVLNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRVI 440 (482)
T ss_pred cceEecccCccccccchHHHhhhhhccccCCccCcccc
Confidence 66677766653211 1111111 556666666666543
No 66
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.22 E-value=0.00024 Score=66.07 Aligned_cols=68 Identities=22% Similarity=0.272 Sum_probs=50.9
Q ss_pred cchhccCCCCCCEEECCCCCCCCcCCccccCCCCCCCEEECCCC--cCcCcCCcccccCCCCCcEEEccCCccc
Q 037315 10 LPWCLANMTSLRILDVSSNQLTGSISSSPLFYLTSIEELSLSNN--HFHIPISLEPLFNHSRLKIFYADNNPIN 81 (693)
Q Consensus 10 ~~~~~~~l~~L~~L~Ls~n~l~~~l~~~~~~~l~~L~~L~Ls~n--~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 81 (693)
+......+..|+.|++.+..++ ++.. +-.|++|++|.+|.| ++.+..+. ....+++|++|++++|++.
T Consensus 35 ~~gl~d~~~~le~ls~~n~glt-t~~~--~P~Lp~LkkL~lsdn~~~~~~~l~v-l~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLT-TLTN--FPKLPKLKKLELSDNYRRVSGGLEV-LAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred cccccccccchhhhhhhcccee-eccc--CCCcchhhhhcccCCccccccccee-hhhhCCceeEEeecCCccc
Confidence 5666777888888888888877 5554 667889999999999 55544442 3344699999999999875
No 67
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.67 E-value=0.00017 Score=78.32 Aligned_cols=177 Identities=22% Similarity=0.110 Sum_probs=101.7
Q ss_pred cCCCCCCEEEccCccccccC-chhhhhcCCCCCEEEccCC-cccccC----CCCCCCCCCCCEEEccCCc-CcccCChhh
Q 037315 117 YYQHDLEDVHFSRIQMNGEF-PNWLLENNTKLRQLSLVND-SLAGPF----RLPIHSHRHLRLLDVSNNN-FQGHIPVEI 189 (693)
Q Consensus 117 ~~~~~L~~L~l~~~~~~~~~-~~~~~~~~~~L~~L~l~~~-~~~~~~----~~~l~~~~~L~~L~l~~n~-~~~~~~~~~ 189 (693)
..++.|+.+.+.++...... -..+...++.|++|+++++ ...... ......+++|+.|+++.+. +++..-..+
T Consensus 185 ~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l 264 (482)
T KOG1947|consen 185 SSCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSAL 264 (482)
T ss_pred hhCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHH
Confidence 34678888888877443321 1233467888999998873 111111 1234456888899998887 665555566
Q ss_pred hhcCCCCcEEEccCCc-ccccCC-ccCCCCCCCCEEEcccCcccc-ccchHHhhCCCCCcEEEccccccccccCccCCCC
Q 037315 190 GDILPRLISFNISMNA-LDGSIP-SSFGNMNLLQILDLSNNQLTG-EIPEHLAMGCVNLEFLALSNNSLKGHMFSRNFNL 266 (693)
Q Consensus 190 ~~~l~~L~~L~L~~n~-i~~~~~-~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 266 (693)
...+++|++|.+.+|. +++..- .....++.|++|+++++.... ..-.....++++++.|.+....- +
T Consensus 265 ~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~~----------c 334 (482)
T KOG1947|consen 265 ASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLNG----------C 334 (482)
T ss_pred HhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcCC----------C
Confidence 6668899999987776 443222 223457889999999876531 21122244577777765443321 3
Q ss_pred CCCCeEeccCcccc---ccCCcCCcCCCCCCEEeccCCcc
Q 037315 267 INLRWLQLEGNHFV---GEIPQSLSKCSSLEGLYLNNNSL 303 (693)
Q Consensus 267 ~~L~~L~L~~n~l~---~~~~~~l~~l~~L~~L~L~~n~i 303 (693)
+.++.+.+.+.... .........+++++.+.+..+..
T Consensus 335 ~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~ 374 (482)
T KOG1947|consen 335 PSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGI 374 (482)
T ss_pred ccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhc
Confidence 34444444433221 11112344566666666666653
No 68
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.66 E-value=0.00011 Score=68.45 Aligned_cols=78 Identities=28% Similarity=0.322 Sum_probs=47.1
Q ss_pred ccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCc-ccccCCCCCCEEeCCCccccccCCc-----ccccCC
Q 037315 511 LSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIP-STFSNLKQIESLDLSYNKLNGKIPH-----QLVELK 584 (693)
Q Consensus 511 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~-----~l~~l~ 584 (693)
++.|++|.||-|+|+.. ..+..+++|++|+|..|.|.++.. ..+.++++|+.|.|..|+-.+..+. .+.-||
T Consensus 40 Mp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ENPCc~~ag~nYR~~VLR~LP 117 (388)
T KOG2123|consen 40 MPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLDENPCCGEAGQNYRRKVLRVLP 117 (388)
T ss_pred cccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhccCCcccccchhHHHHHHHHcc
Confidence 56667777777766654 335666677777777776665532 4456667777777777766554433 233455
Q ss_pred CCCEEe
Q 037315 585 ELAVFS 590 (693)
Q Consensus 585 ~L~~L~ 590 (693)
+|+.||
T Consensus 118 nLkKLD 123 (388)
T KOG2123|consen 118 NLKKLD 123 (388)
T ss_pred cchhcc
Confidence 665554
No 69
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.57 E-value=0.0014 Score=61.22 Aligned_cols=69 Identities=22% Similarity=0.282 Sum_probs=54.7
Q ss_pred hccCCCCCCEEECCCC--CCCCcCCccccCCCCCCCEEECCCCcCcCcCCcccccCCCCCcEEEccCCcccc
Q 037315 13 CLANMTSLRILDVSSN--QLTGSISSSPLFYLTSIEELSLSNNHFHIPISLEPLFNHSRLKIFYADNNPINA 82 (693)
Q Consensus 13 ~~~~l~~L~~L~Ls~n--~l~~~l~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 82 (693)
.|-.+++|++|++|.| .+.+.++. ....+++|++|++++|++...-....+..+.+|..|++.+|..+.
T Consensus 60 ~~P~Lp~LkkL~lsdn~~~~~~~l~v-l~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 60 NFPKLPKLKKLELSDNYRRVSGGLEV-LAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTN 130 (260)
T ss_pred cCCCcchhhhhcccCCccccccccee-hhhhCCceeEEeecCCccccccccchhhhhcchhhhhcccCCccc
Confidence 4566889999999999 67666665 566779999999999999754444567778889999998887653
No 70
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.28 E-value=0.00023 Score=66.42 Aligned_cols=87 Identities=20% Similarity=0.186 Sum_probs=73.2
Q ss_pred ccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCC-cccccCCCCCEE
Q 037315 511 LSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIP-HQLVELKELAVF 589 (693)
Q Consensus 511 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L 589 (693)
+.+.+.|++.+|++.++ .....++.|++|.||-|+|+.+ ..|..++.|++|+|..|.|..... ..+.++|+|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 56788999999999865 4577899999999999999988 558899999999999999974332 346789999999
Q ss_pred ecCCCcCcccCC
Q 037315 590 SVAYNNLSGEIP 601 (693)
Q Consensus 590 ~l~~N~l~~~~p 601 (693)
.|..|+-.|.-+
T Consensus 94 WL~ENPCc~~ag 105 (388)
T KOG2123|consen 94 WLDENPCCGEAG 105 (388)
T ss_pred hhccCCcccccc
Confidence 999999776543
No 71
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.31 E-value=0.005 Score=33.93 Aligned_cols=21 Identities=48% Similarity=0.567 Sum_probs=12.7
Q ss_pred CCCEEECCCCCCCCcCCccccCC
Q 037315 19 SLRILDVSSNQLTGSISSSPLFY 41 (693)
Q Consensus 19 ~L~~L~Ls~n~l~~~l~~~~~~~ 41 (693)
+|++|||++|+++ .+|. .|++
T Consensus 1 ~L~~Ldls~n~l~-~ip~-~~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPS-SFSN 21 (22)
T ss_dssp TESEEEETSSEES-EEGT-TTTT
T ss_pred CccEEECCCCcCE-eCCh-hhcC
Confidence 4666677776666 6666 3443
No 72
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.77 E-value=0.0098 Score=32.74 Aligned_cols=11 Identities=64% Similarity=0.658 Sum_probs=4.5
Q ss_pred CEEeCCCcccc
Q 037315 563 ESLDLSYNKLN 573 (693)
Q Consensus 563 ~~L~Ls~N~l~ 573 (693)
++|||++|+++
T Consensus 3 ~~Ldls~n~l~ 13 (22)
T PF00560_consen 3 EYLDLSGNNLT 13 (22)
T ss_dssp SEEEETSSEES
T ss_pred cEEECCCCcCE
Confidence 34444444443
No 73
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=94.49 E-value=0.022 Score=29.00 Aligned_cols=14 Identities=57% Similarity=0.821 Sum_probs=6.6
Q ss_pred CCCCEEECCCCCCC
Q 037315 18 TSLRILDVSSNQLT 31 (693)
Q Consensus 18 ~~L~~L~Ls~n~l~ 31 (693)
++|+.|+|++|+++
T Consensus 1 ~~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 1 PNLRTLDLSNNRLT 14 (17)
T ss_dssp TT-SEEEETSS--S
T ss_pred CccCEEECCCCCCC
Confidence 35666666666655
No 74
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=93.62 E-value=0.061 Score=30.96 Aligned_cols=22 Identities=41% Similarity=0.665 Sum_probs=14.8
Q ss_pred CCCCCEEECCCCCCCCcCCcccc
Q 037315 17 MTSLRILDVSSNQLTGSISSSPL 39 (693)
Q Consensus 17 l~~L~~L~Ls~n~l~~~l~~~~~ 39 (693)
+++|++|+|++|+|+ .+|...|
T Consensus 1 L~~L~~L~L~~N~l~-~lp~~~f 22 (26)
T smart00370 1 LPNLRELDLSNNQLS-SLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCC-cCCHHHc
Confidence 456777777777776 6766444
No 75
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=93.62 E-value=0.061 Score=30.96 Aligned_cols=22 Identities=41% Similarity=0.665 Sum_probs=14.8
Q ss_pred CCCCCEEECCCCCCCCcCCcccc
Q 037315 17 MTSLRILDVSSNQLTGSISSSPL 39 (693)
Q Consensus 17 l~~L~~L~Ls~n~l~~~l~~~~~ 39 (693)
+++|++|+|++|+|+ .+|...|
T Consensus 1 L~~L~~L~L~~N~l~-~lp~~~f 22 (26)
T smart00369 1 LPNLRELDLSNNQLS-SLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCC-cCCHHHc
Confidence 456777777777776 6766444
No 76
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=92.57 E-value=0.094 Score=30.17 Aligned_cols=18 Identities=39% Similarity=0.702 Sum_probs=8.2
Q ss_pred CCCeeeCCCccCCccCcc
Q 037315 537 RIQTLNLSHNNLTGLIPS 554 (693)
Q Consensus 537 ~L~~L~Ls~n~l~~~~~~ 554 (693)
+|+.|+|++|+|+.+++.
T Consensus 3 ~L~~L~L~~N~l~~lp~~ 20 (26)
T smart00369 3 NLRELDLSNNQLSSLPPG 20 (26)
T ss_pred CCCEEECCCCcCCcCCHH
Confidence 444444444444444333
No 77
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=92.57 E-value=0.094 Score=30.17 Aligned_cols=18 Identities=39% Similarity=0.702 Sum_probs=8.2
Q ss_pred CCCeeeCCCccCCccCcc
Q 037315 537 RIQTLNLSHNNLTGLIPS 554 (693)
Q Consensus 537 ~L~~L~Ls~n~l~~~~~~ 554 (693)
+|+.|+|++|+|+.+++.
T Consensus 3 ~L~~L~L~~N~l~~lp~~ 20 (26)
T smart00370 3 NLRELDLSNNQLSSLPPG 20 (26)
T ss_pred CCCEEECCCCcCCcCCHH
Confidence 444444444444444333
No 78
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=92.32 E-value=0.001 Score=70.21 Aligned_cols=87 Identities=22% Similarity=0.170 Sum_probs=39.0
Q ss_pred CCCCCeEeccCccccccC----CcCCcCCCC-CCEEeccCCcccccC----CccccCC-CCCcEEEccCCccccCcc---
Q 037315 266 LINLRWLQLEGNHFVGEI----PQSLSKCSS-LEGLYLNNNSLSGKI----PRWLGNL-TWLIHIIMPKNHLEGPIP--- 332 (693)
Q Consensus 266 l~~L~~L~L~~n~l~~~~----~~~l~~l~~-L~~L~L~~n~i~~~~----~~~l~~l-~~L~~L~l~~n~~~~~~~--- 332 (693)
..++++|.+.+|.++... ...+...+. +..|++..|.+.+.. ...+..+ ..+++++++.|.+.....
T Consensus 203 ~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L 282 (478)
T KOG4308|consen 203 LSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDL 282 (478)
T ss_pred cccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHH
Confidence 345555555555544211 112222333 444666666554321 1122223 344555555555543322
Q ss_pred -ccccCCCCCCEEECcCCcCC
Q 037315 333 -VEFCHLYSLQILDISDNNIS 352 (693)
Q Consensus 333 -~~~~~l~~L~~L~l~~n~~~ 352 (693)
..+..++.++.+.+++|.+.
T Consensus 283 ~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 283 AEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHhhhHHHHHhhcccCccc
Confidence 22334555666666666554
No 79
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=91.94 E-value=0.00075 Score=71.20 Aligned_cols=195 Identities=21% Similarity=0.168 Sum_probs=87.6
Q ss_pred CCEEECCCCcCcCcCC---cccccCCCCCcEEEccCCccccccccccCCCCCC--ccccEEecCCCCCCCCc----Cchh
Q 037315 45 IEELSLSNNHFHIPIS---LEPLFNHSRLKIFYADNNPINAKITKSHTLTTPK--FQLASLSLSSSYGDGVT----FPKF 115 (693)
Q Consensus 45 L~~L~Ls~n~~~~~~~---~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~--~~L~~L~L~~~~~~~~~----~~~~ 115 (693)
+.+|.|.+|.+..... ...+.....|..|++++|.+.+.....+...+.. ..++.|.+ ..|.++.. +...
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l-~~c~l~~~g~~~l~~~ 167 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLEL-VSCSLTSEGAAPLAAV 167 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHh-hcccccccchHHHHHH
Confidence 6666666666642211 1233445666667777766654443333332222 14444554 33333322 2233
Q ss_pred hcCCCCCCEEEccCccccccCchhhhhcCCCCCEEEccCCcccccCCCCCCCCCCCCEEEccCCcCcccCChhhh---hc
Q 037315 116 LYYQHDLEDVHFSRIQMNGEFPNWLLENNTKLRQLSLVNDSLAGPFRLPIHSHRHLRLLDVSNNNFQGHIPVEIG---DI 192 (693)
Q Consensus 116 l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~---~~ 192 (693)
+.....++.++++.|.+........... ....+....++++|.+++|.++...-..+. ..
T Consensus 168 L~~~~~l~~l~l~~n~l~~~g~~~l~~~-----------------l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~ 230 (478)
T KOG4308|consen 168 LEKNEHLTELDLSLNGLIELGLLVLSQA-----------------LESAASPLSSLETLKLSRCGVTSSSCALLDEVLAS 230 (478)
T ss_pred HhcccchhHHHHHhcccchhhhHHHhhh-----------------hhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhc
Confidence 3344445555555554421000000000 000122344555555555554411111111 11
Q ss_pred CCC-CcEEEccCCccccc----CCccCCCC-CCCCEEEcccCccccccchHHh---hCCCCCcEEEcccccccc
Q 037315 193 LPR-LISFNISMNALDGS----IPSSFGNM-NLLQILDLSNNQLTGEIPEHLA---MGCVNLEFLALSNNSLKG 257 (693)
Q Consensus 193 l~~-L~~L~L~~n~i~~~----~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~---~~l~~L~~L~l~~n~l~~ 257 (693)
.+. ++.|++..|.+.+. ....+..+ ..+++++++.|.+++.-..... ..++.++++.++.|.+..
T Consensus 231 ~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 231 GESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred cchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 222 44566666655432 12223334 5667777777777643322221 245677788888777764
No 80
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.58 E-value=0.055 Score=48.69 Aligned_cols=84 Identities=17% Similarity=0.127 Sum_probs=59.7
Q ss_pred CcceEECCCCcccccCchhhccCCCCCeeeCCCccCCcc-Cccccc-CCCCCCEEeCCCcc-ccccCCcccccCCCCCEE
Q 037315 513 LLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGL-IPSTFS-NLKQIESLDLSYNK-LNGKIPHQLVELKELAVF 589 (693)
Q Consensus 513 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~-~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L 589 (693)
.++.+|-++..|..+--+.+.++++++.|.+.+|.--+- --+.++ ..++|+.|+|++|+ |+...-..+..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 478899999999887777888889999999988864321 001111 34789999999774 665555667778888888
Q ss_pred ecCCCcC
Q 037315 590 SVAYNNL 596 (693)
Q Consensus 590 ~l~~N~l 596 (693)
.+.+=+-
T Consensus 182 ~l~~l~~ 188 (221)
T KOG3864|consen 182 HLYDLPY 188 (221)
T ss_pred HhcCchh
Confidence 7765443
No 81
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=89.26 E-value=0.26 Score=61.46 Aligned_cols=36 Identities=19% Similarity=0.165 Sum_probs=23.4
Q ss_pred eCCCccccccCCcccccCCCCCEEecCCCcCcccCC
Q 037315 566 DLSYNKLNGKIPHQLVELKELAVFSVAYNNLSGEIP 601 (693)
Q Consensus 566 ~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p 601 (693)
||++|+|+.+.+..|..+++|+.|+|++|++.|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CDC~ 36 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECDCG 36 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccccccc
Confidence 466666666666666666667777776666666544
No 82
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=88.95 E-value=0.015 Score=53.28 Aligned_cols=84 Identities=19% Similarity=0.225 Sum_probs=70.8
Q ss_pred ccCcceEECCCCcccccCchhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCcccccCCCCCEEe
Q 037315 511 LSLLSGLDLSCNKLIGHIPPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVFS 590 (693)
Q Consensus 511 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 590 (693)
+...+.||++.|++. .....|+-++.|..|+++.|.+.- .|..++.+..+..+++.+|..+ ..|..+...+.+++++
T Consensus 41 ~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~~-~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e 117 (326)
T KOG0473|consen 41 FKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIKF-LPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNE 117 (326)
T ss_pred cceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHhh-ChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhh
Confidence 446788999999887 445668888899999999999984 4788888899999999999887 7888899999999999
Q ss_pred cCCCcCc
Q 037315 591 VAYNNLS 597 (693)
Q Consensus 591 l~~N~l~ 597 (693)
+-+|++.
T Consensus 118 ~k~~~~~ 124 (326)
T KOG0473|consen 118 QKKTEFF 124 (326)
T ss_pred hccCcch
Confidence 9999875
No 83
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.31 E-value=0.042 Score=49.41 Aligned_cols=81 Identities=14% Similarity=0.187 Sum_probs=38.6
Q ss_pred CCEEEccCCcccccCCCCCCCCCCCCEEEccCCcCcc-cCChhhhhcCCCCcEEEccCCc-ccccCCccCCCCCCCCEEE
Q 037315 147 LRQLSLVNDSLAGPFRLPIHSHRHLRLLDVSNNNFQG-HIPVEIGDILPRLISFNISMNA-LDGSIPSSFGNMNLLQILD 224 (693)
Q Consensus 147 L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~-~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~ 224 (693)
++.++-+++.+.......+..++.++.|.+.+|.--+ ..-..++...++|+.|++++|. |++..-..+..+++|+.|.
T Consensus 103 IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~ 182 (221)
T KOG3864|consen 103 IEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRLH 182 (221)
T ss_pred EEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHHH
Confidence 4555555555554444445555555555555553211 1111122234566666666553 4433333445555666555
Q ss_pred ccc
Q 037315 225 LSN 227 (693)
Q Consensus 225 L~~ 227 (693)
+.+
T Consensus 183 l~~ 185 (221)
T KOG3864|consen 183 LYD 185 (221)
T ss_pred hcC
Confidence 554
No 84
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=85.41 E-value=0.13 Score=28.84 Aligned_cols=13 Identities=46% Similarity=0.787 Sum_probs=5.1
Q ss_pred CCCEEeCCCcccc
Q 037315 561 QIESLDLSYNKLN 573 (693)
Q Consensus 561 ~L~~L~Ls~N~l~ 573 (693)
+|++|+|++|+|+
T Consensus 3 ~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 3 NLETLDLSNNQIT 15 (24)
T ss_dssp T-SEEE-TSSBEH
T ss_pred CCCEEEccCCcCC
Confidence 4444444444443
No 85
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=84.70 E-value=0.028 Score=51.44 Aligned_cols=90 Identities=26% Similarity=0.361 Sum_probs=73.8
Q ss_pred chhhccCCCCCeeeCCCccCCccCcccccCCCCCCEEeCCCccccccCCcccccCCCCCEEecCCCcCcccCCCCccccC
Q 037315 529 PPQVGNLTRIQTLNLSHNNLTGLIPSTFSNLKQIESLDLSYNKLNGKIPHQLVELKELAVFSVAYNNLSGEIPEWKAQFA 608 (693)
Q Consensus 529 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 608 (693)
...+......+.||++.|++... -..|+-++.|..||++.|++. ..|..+..+..+..+++.+|..+ ..|..+.+.+
T Consensus 35 v~ei~~~kr~tvld~~s~r~vn~-~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~ 111 (326)
T KOG0473|consen 35 VREIASFKRVTVLDLSSNRLVNL-GKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEP 111 (326)
T ss_pred hhhhhccceeeeehhhhhHHHhh-ccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccC
Confidence 34567788999999999998765 356778899999999999998 78888888888999999999887 4566667888
Q ss_pred cCCcccccCccCC
Q 037315 609 TFNENSYEGNTFL 621 (693)
Q Consensus 609 ~l~~~~~~~n~~~ 621 (693)
........+||+.
T Consensus 112 ~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 112 HPKKNEQKKTEFF 124 (326)
T ss_pred CcchhhhccCcch
Confidence 8887777777754
No 86
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=84.27 E-value=0.93 Score=26.02 Aligned_cols=15 Identities=40% Similarity=0.645 Sum_probs=9.1
Q ss_pred CCCCCEEECCCCCCC
Q 037315 17 MTSLRILDVSSNQLT 31 (693)
Q Consensus 17 l~~L~~L~Ls~n~l~ 31 (693)
+++|++|+|++|+|+
T Consensus 1 L~~L~~L~L~~NkI~ 15 (26)
T smart00365 1 LTNLEELDLSQNKIK 15 (26)
T ss_pred CCccCEEECCCCccc
Confidence 345666666666665
No 87
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=78.85 E-value=0.94 Score=56.83 Aligned_cols=58 Identities=19% Similarity=0.312 Sum_probs=47.9
Q ss_pred ecCCCcCcccCCCCccccCcCCcccccCccCCCCCCCC-------------------CCCCCCCCCccccccccCCC
Q 037315 590 SVAYNNLSGEIPEWKAQFATFNENSYEGNTFLCGLPLP-------------------ICRSPTTMSEASIENERDDN 647 (693)
Q Consensus 590 ~l~~N~l~~~~p~~~~~~~~l~~~~~~~n~~~c~~~~~-------------------~c~~~~~~~~~~~~~~~~~~ 647 (693)
||++|+|+...+..|..+.++..+.+++|||.|+|.+. .|..|...++..+.+...++
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CDC~L~WL~~WL~~~~v~v~~~~~i~CasP~~LrG~~L~~l~~~d 77 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECDCGLARLPRWAEEKGVKVRQPEAALCAGPGALAGQPLLGIPLLD 77 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccccccccHHHHHHHHhcCccccCCcccCCCCChHHCCCCcccCCccc
Confidence 68999999877777778889999999999999999772 38888888888777665554
No 88
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=76.00 E-value=2 Score=24.58 Aligned_cols=18 Identities=56% Similarity=0.696 Sum_probs=12.0
Q ss_pred CCCCEEECCCCCCCCcCCc
Q 037315 18 TSLRILDVSSNQLTGSISS 36 (693)
Q Consensus 18 ~~L~~L~Ls~n~l~~~l~~ 36 (693)
++|++|+.++|+++ ++|+
T Consensus 2 ~~L~~L~vs~N~Lt-~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLT-SLPE 19 (26)
T ss_pred cccceeecCCCccc-cCcc
Confidence 35677777777776 6665
No 89
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=70.90 E-value=3.7 Score=24.00 Aligned_cols=13 Identities=62% Similarity=0.769 Sum_probs=6.6
Q ss_pred CCCEEECCCCCCC
Q 037315 19 SLRILDVSSNQLT 31 (693)
Q Consensus 19 ~L~~L~Ls~n~l~ 31 (693)
+|++|||++|.+.
T Consensus 3 ~L~~LdL~~N~i~ 15 (28)
T smart00368 3 SLRELDLSNNKLG 15 (28)
T ss_pred ccCEEECCCCCCC
Confidence 4555555555543
No 90
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=70.70 E-value=14 Score=38.39 Aligned_cols=17 Identities=35% Similarity=0.235 Sum_probs=9.7
Q ss_pred CCCEEECCCCcCcCcCC
Q 037315 44 SIEELSLSNNHFHIPIS 60 (693)
Q Consensus 44 ~L~~L~Ls~n~~~~~~~ 60 (693)
.+.+++|+.|...+.+|
T Consensus 215 ~lteldls~n~~Kddip 231 (553)
T KOG4242|consen 215 WLTELDLSTNGGKDDIP 231 (553)
T ss_pred cccccccccCCCCccch
Confidence 46666666665554444
No 91
>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional
Probab=64.97 E-value=3.6 Score=33.83 Aligned_cols=33 Identities=15% Similarity=0.050 Sum_probs=21.7
Q ss_pred ehhhhhhhhhhhhhhhhccccchhhhhhhhcee
Q 037315 658 FTTSYVIVIFGIVTVLYVNSYWRHRWFYFVEMW 690 (693)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (693)
+++++.+++++.++.+++++|+|+|..-.-+++
T Consensus 105 ~il~il~~i~is~~~~~~yr~~r~~~~~~~~~~ 137 (139)
T PHA03099 105 GIVLVLVGIIITCCLLSVYRFTRRTKLPLQDMV 137 (139)
T ss_pred HHHHHHHHHHHHHHHHhhheeeecccCchhhcc
Confidence 345555556666677777788888876665554
No 92
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=61.35 E-value=37 Score=35.37 Aligned_cols=19 Identities=47% Similarity=0.592 Sum_probs=10.4
Q ss_pred CCEEEcccCccccccchHH
Q 037315 220 LQILDLSNNQLTGEIPEHL 238 (693)
Q Consensus 220 L~~L~L~~n~l~~~~~~~~ 238 (693)
+.+++++.|...+.+|..+
T Consensus 216 lteldls~n~~Kddip~~~ 234 (553)
T KOG4242|consen 216 LTELDLSTNGGKDDIPRTL 234 (553)
T ss_pred ccccccccCCCCccchhHH
Confidence 4556666665555555433
No 93
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=60.35 E-value=3.9 Score=43.10 Aligned_cols=61 Identities=28% Similarity=0.286 Sum_probs=36.3
Q ss_pred ccCcceEECCCCcccccC--chhhccCCCCCeeeCCCc--cCCccCcccccC--CCCCCEEeCCCcccc
Q 037315 511 LSLLSGLDLSCNKLIGHI--PPQVGNLTRIQTLNLSHN--NLTGLIPSTFSN--LKQIESLDLSYNKLN 573 (693)
Q Consensus 511 l~~L~~L~Ls~n~l~~~~--~~~~~~l~~L~~L~Ls~n--~l~~~~~~~~~~--l~~L~~L~Ls~N~l~ 573 (693)
.+.+..+.|++|++.... ...-...|+|+.|+|++| .+... ..+.. ...|++|-+.+|++.
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~--~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSE--SELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcch--hhhhhhcCCCHHHeeecCCccc
Confidence 456777888888775331 111234577888888888 43322 22222 245777888888775
No 94
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=53.67 E-value=5.9 Score=41.82 Aligned_cols=60 Identities=23% Similarity=0.318 Sum_probs=31.3
Q ss_pred CCCCCCEEECCCCCCCCcCCccccC----CCCCCCEEECCCC--cCcCcCCcccccC--CCCCcEEEccCCccc
Q 037315 16 NMTSLRILDVSSNQLTGSISSSPLF----YLTSIEELSLSNN--HFHIPISLEPLFN--HSRLKIFYADNNPIN 81 (693)
Q Consensus 16 ~l~~L~~L~Ls~n~l~~~l~~~~~~----~l~~L~~L~Ls~n--~~~~~~~~~~~~~--l~~L~~L~l~~n~~~ 81 (693)
+.+.+..++|++|++. .+.. +. .-++|+.|+|++| .+... ..+.+ ...|++|.+.+|++.
T Consensus 216 n~p~i~sl~lsnNrL~-~Ld~--~sslsq~apklk~L~LS~N~~~~~~~---~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLY-HLDA--LSSLSQIAPKLKTLDLSHNHSKISSE---SELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhh-chhh--hhHHHHhcchhheeecccchhhhcch---hhhhhhcCCCHHHeeecCCccc
Confidence 4556666677777665 4432 22 2366777777776 32211 11222 234566666666654
No 95
>PF15102 TMEM154: TMEM154 protein family
Probab=50.34 E-value=8.5 Score=32.89 Aligned_cols=16 Identities=13% Similarity=0.227 Sum_probs=7.1
Q ss_pred hhhhhhhhhccccchh
Q 037315 666 IFGIVTVLYVNSYWRH 681 (693)
Q Consensus 666 ~~~~~~~~~~~~~~~~ 681 (693)
+++++++++++++||.
T Consensus 72 Ll~vV~lv~~~kRkr~ 87 (146)
T PF15102_consen 72 LLSVVCLVIYYKRKRT 87 (146)
T ss_pred HHHHHHheeEEeeccc
Confidence 3334444444445544
No 96
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=45.84 E-value=15 Score=20.88 Aligned_cols=13 Identities=31% Similarity=0.393 Sum_probs=8.2
Q ss_pred CCCCCEEECCCCc
Q 037315 42 LTSIEELSLSNNH 54 (693)
Q Consensus 42 l~~L~~L~Ls~n~ 54 (693)
+++|++|+|++|.
T Consensus 1 c~~L~~L~l~~C~ 13 (26)
T smart00367 1 CPNLRELDLSGCT 13 (26)
T ss_pred CCCCCEeCCCCCC
Confidence 3566677776663
No 97
>PTZ00382 Variant-specific surface protein (VSP); Provisional
Probab=38.26 E-value=35 Score=27.21 Aligned_cols=19 Identities=26% Similarity=0.349 Sum_probs=7.2
Q ss_pred eeehhhhhhhhhhhhhhhh
Q 037315 656 ITFTTSYVIVIFGIVTVLY 674 (693)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~ 674 (693)
+.++++.++++.+++.+++
T Consensus 69 agi~vg~~~~v~~lv~~l~ 87 (96)
T PTZ00382 69 AGISVAVVAVVGGLVGFLC 87 (96)
T ss_pred EEEEeehhhHHHHHHHHHh
Confidence 3333333333333333443
No 98
>PF15050 SCIMP: SCIMP protein
Probab=31.14 E-value=14 Score=29.98 Aligned_cols=30 Identities=23% Similarity=0.515 Sum_probs=17.7
Q ss_pred eeeeehhhhhhhhhhhhhhhhccccchhhh
Q 037315 654 FFITFTTSYVIVIFGIVTVLYVNSYWRHRW 683 (693)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (693)
|++.++++++++-+++..++|+..+|..|.
T Consensus 8 FWiiLAVaII~vS~~lglIlyCvcR~~lRq 37 (133)
T PF15050_consen 8 FWIILAVAIILVSVVLGLILYCVCRWQLRQ 37 (133)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 555666665555555666666656665543
No 99
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=26.91 E-value=19 Score=35.55 Aligned_cols=16 Identities=19% Similarity=0.534 Sum_probs=6.0
Q ss_pred hhhhhhhhhhhhcccc
Q 037315 663 VIVIFGIVTVLYVNSY 678 (693)
Q Consensus 663 ~~~~~~~~~~~~~~~~ 678 (693)
++++++|+++.++.+|
T Consensus 266 liIVLIMvIIYLILRY 281 (299)
T PF02009_consen 266 LIIVLIMVIIYLILRY 281 (299)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333334333333333
No 100
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=25.16 E-value=34 Score=29.64 Aligned_cols=9 Identities=11% Similarity=0.128 Sum_probs=3.8
Q ss_pred eeeeehhhh
Q 037315 654 FFITFTTSY 662 (693)
Q Consensus 654 ~~~~~~~~~ 662 (693)
.++++++++
T Consensus 50 IVIGvVVGV 58 (154)
T PF04478_consen 50 IVIGVVVGV 58 (154)
T ss_pred EEEEEEecc
Confidence 344444443
No 101
>smart00082 LRRCT Leucine rich repeat C-terminal domain.
Probab=24.85 E-value=35 Score=23.04 Aligned_cols=10 Identities=40% Similarity=0.879 Sum_probs=8.6
Q ss_pred ccCCCCCCCC
Q 037315 618 NTFLCGLPLP 627 (693)
Q Consensus 618 n~~~c~~~~~ 627 (693)
|||.|+|.+.
T Consensus 1 NP~~CdC~l~ 10 (51)
T smart00082 1 NPFICDCELR 10 (51)
T ss_pred CCccCcCCch
Confidence 8999999874
Done!