Query 037329
Match_columns 474
No_of_seqs 338 out of 1179
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 18:57:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037329.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037329hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 100.0 1.8E-33 6.3E-38 280.3 12.9 213 58-287 6-238 (280)
2 1qg8_A Protein (spore coat pol 68.1 5 0.00017 36.9 4.7 97 155-251 88-201 (255)
3 4fix_A UDP-galactofuranosyl tr 63.1 5.9 0.0002 43.2 4.7 96 155-256 268-408 (657)
4 1xhb_A Polypeptide N-acetylgal 60.8 30 0.001 35.2 9.4 45 207-256 204-249 (472)
5 2d7i_A Polypeptide N-acetylgal 56.6 38 0.0013 35.8 9.6 45 207-256 284-329 (570)
6 2c0n_A A197; thermophil protei 55.7 19 0.00065 33.6 6.0 114 144-264 44-175 (203)
7 3bcv_A Putative glycosyltransf 51.1 11 0.00038 34.0 3.7 98 155-256 84-216 (240)
8 4hg6_A Cellulose synthase subu 49.4 22 0.00076 39.5 6.5 97 154-258 237-361 (802)
9 2z86_A Chondroitin synthase; G 43.8 19 0.00065 38.1 4.7 47 207-258 276-323 (625)
10 2ffu_A Ppgalnact-2, polypeptid 42.6 15 0.00052 37.9 3.6 46 207-257 236-282 (501)
11 2z86_A Chondroitin synthase; G 23.3 49 0.0017 34.9 3.6 94 155-255 454-562 (625)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=100.00 E-value=1.8e-33 Score=280.26 Aligned_cols=213 Identities=15% Similarity=0.169 Sum_probs=146.5
Q ss_pred CCCCCCCCeEEEEEEcCccChHHHHHHHHHhhhhcCC-eEEEeeecCCCCCCCCCCCCCCCeEe---ccCCccccccccc
Q 037329 58 VTSPTNINHIVFGIAGTVNGWKYRRAYVEAWWRPNVT-RGYLFLERFPSREFLPWPPSSPPFRV---NENITRLKSYEKI 133 (474)
Q Consensus 58 ~~~~~~~s~IvfgI~TS~~~~~~R~~aIk~TW~~~~~-r~~vFld~~~~~~~~~~~~~lp~v~i---s~d~s~f~~~~k~ 133 (474)
.+.++++++|+|+|+|+.+.|.+|+++|++||++++. .++||+|.++.. +... .+..+.. +...++.+++.
T Consensus 6 ~~~~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~~-l~~~--~~~~~~~~~~~~~~~~~~l~~-- 80 (280)
T 2j0a_A 6 GPLELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDER-LQER--LGPHLVVTQCSAEHSHPALSC-- 80 (280)
T ss_dssp ---CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCHH-HHHH--HGGGEEECCC-------CCCH--
T ss_pred CCCCCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCccc-cccc--ccccceeccccccccccchHH--
Confidence 3467899999999999999999999999999999875 467788865431 1000 0011111 11112333333
Q ss_pred chhHHHHHHHHHHHHHHhCCCCccEEEEEcCCccccHHHHHHHHhcCCCCCceEEEeccCCCCCC----------ccccc
Q 037329 134 KNSFQVRVFRTILETFREGDEDVRWYVMADDDTILFVDNLVEVLAKYDHTQYLYIGTNSECVSSN----------FHASF 203 (474)
Q Consensus 134 g~~~a~R~~~~v~e~~~~~~~~~kWfv~~DDDTf~~~~nL~~~L~~yD~~~p~YiG~~se~~~q~----------~~~~y 203 (474)
|+...+...+ .+++|||+++||||||+++||+++|++|||++++|+|.+++..... ...++
T Consensus 81 ------K~~~~~~~~l---~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~~~~~~~~~~~~~~~ 151 (280)
T 2j0a_A 81 ------KMAAEFDAFL---VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKLVRF 151 (280)
T ss_dssp ------HHHHHHHHHH---HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------C
T ss_pred ------HHHHHHHHHh---CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccccccCcccccccccc
Confidence 3444444322 3799999999999999999999999999999999999998764211 11246
Q ss_pred cccccCcceeecHHHHHHHHHHhhHhhhhc----cCCChhhHHHHHHHH-HcCCceEecCCCCcccCC-CCcccccccCC
Q 037329 204 NMAFGGAGYALSYPLVEALAAKFDKCVEKY----QNLYASDLMLYSCLA-DLGVTLTLEKGFHQIDLH-SDISGLLSALP 277 (474)
Q Consensus 204 ~~a~GGaG~vLSr~ll~~L~~~~d~C~~~~----~~~~~~D~~Lg~Cl~-~lGV~lt~~~gfhQ~d~~-gd~~g~~~s~~ 277 (474)
.|++||||||||++|+++|.+..+.|. .+ .....+|+.||+||+ ++||+++++++|||.... ++..+..-.+
T Consensus 152 ~y~~GGaG~vlSr~~l~~l~~~~~~~~-~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~- 229 (280)
T 2j0a_A 152 WFATGGAGFCINRQLALKMVPWASGSH-FVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPE- 229 (280)
T ss_dssp CEECGGGCEEEEHHHHHHHHHHHTTCT-TSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSSCGGGCCTTTGGG-
T ss_pred CcccCCCEEEECHHHHHHHHHhhcccc-cccccccCCCCccHHHHHHHHhcCCCCceecccccCCCchhccCCHHHhcc-
Confidence 799999999999999999998776661 11 123468999999999 799999999999997642 3332222111
Q ss_pred CCceeecccC
Q 037329 278 QIPVLSLHHL 287 (474)
Q Consensus 278 ~~P~lSlHH~ 287 (474)
++.+|+|++
T Consensus 230 -~~~~s~~~~ 238 (280)
T 2j0a_A 230 -QVTLSYGVF 238 (280)
T ss_dssp -CSEEECEEE
T ss_pred -Ccceecccc
Confidence 346999943
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=68.13 E-value=5 Score=36.85 Aligned_cols=97 Identities=13% Similarity=0.166 Sum_probs=55.4
Q ss_pred CccEEEEEcCCccccHHHHHHHHhcC--CCCCceEEEeccC---CCCC-----------CccccccccccCcceeecHHH
Q 037329 155 DVRWYVMADDDTILFVDNLVEVLAKY--DHTQYLYIGTNSE---CVSS-----------NFHASFNMAFGGAGYALSYPL 218 (474)
Q Consensus 155 ~~kWfv~~DDDTf~~~~nL~~~L~~y--D~~~p~YiG~~se---~~~q-----------~~~~~y~~a~GGaG~vLSr~l 218 (474)
+.+|+++.|+|.++..+.|.++++.+ +|+-.+..|.... .... ...........|+++++.+.+
T Consensus 88 ~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~ 167 (255)
T 1qg8_A 88 EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAIDHCSVMHRYSV 167 (255)
T ss_dssp CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTSCGGGEEEETHH
T ss_pred CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchHHHHHhhcCCCccceEEEEHHH
Confidence 67999999999999876666665543 2343444443211 0000 000011234568899999999
Q ss_pred HHHHHHHhhHhh-hhccCCChhhHHHHHHHHHcC
Q 037329 219 VEALAAKFDKCV-EKYQNLYASDLMLYSCLADLG 251 (474)
Q Consensus 219 l~~L~~~~d~C~-~~~~~~~~~D~~Lg~Cl~~lG 251 (474)
++++...+.... +......++|..+..-+...|
T Consensus 168 ~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g 201 (255)
T 1qg8_A 168 LEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY 201 (255)
T ss_dssp HHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC
T ss_pred HHhhcccccccccCCcccchHHHHHHHHHHHHhC
Confidence 999863330000 000123579998887776655
No 3
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=63.14 E-value=5.9 Score=43.23 Aligned_cols=96 Identities=17% Similarity=0.034 Sum_probs=58.4
Q ss_pred CccEEEEEcCCccccHHHHHHHHhcCCC-CCceEEEeccCCCCC----------------------Ccc----c------
Q 037329 155 DVRWYVMADDDTILFVDNLVEVLAKYDH-TQYLYIGTNSECVSS----------------------NFH----A------ 201 (474)
Q Consensus 155 ~~kWfv~~DDDTf~~~~nL~~~L~~yD~-~~p~YiG~~se~~~q----------------------~~~----~------ 201 (474)
+.+|+++.|||+.+..+.|.++++.++. .+...+|........ ... |
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 347 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLN 347 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSS
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccc
Confidence 7899999999999997777766654422 223344432110000 000 0
Q ss_pred ----------c--ccccccCcceeecHHHHHHHHHHhhHhhhhccCCChhhHHHHHHHHHcCCceEe
Q 037329 202 ----------S--FNMAFGGAGYALSYPLVEALAAKFDKCVEKYQNLYASDLMLYSCLADLGVTLTL 256 (474)
Q Consensus 202 ----------~--y~~a~GGaG~vLSr~ll~~L~~~~d~C~~~~~~~~~~D~~Lg~Cl~~lGV~lt~ 256 (474)
. .....+|+++++.+.+++++-. ++. + ..+.+|..++.=+.+.|.++..
T Consensus 348 ~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGg-fd~----~-F~~~ED~Dl~lR~~~~G~ki~~ 408 (657)
T 4fix_A 348 DNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQ-PLP----L-FIKWDDADYGLRAAEHGYPTVT 408 (657)
T ss_dssp CSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCS-CCS----C-SSSSHHHHHHHHHHHTTCCEEE
T ss_pred cccccccccccceeccccchhHhHhhHHHHHHhCC-Chh----H-hccCcHHHHHHHHHHcCCeEEE
Confidence 0 0113578899999999998743 121 1 2356999999888888865544
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=60.80 E-value=30 Score=35.18 Aligned_cols=45 Identities=13% Similarity=0.347 Sum_probs=31.0
Q ss_pred ccCcceeecHHHHHHHHHHhhHhhhhccCCC-hhhHHHHHHHHHcCCceEe
Q 037329 207 FGGAGYALSYPLVEALAAKFDKCVEKYQNLY-ASDLMLYSCLADLGVTLTL 256 (474)
Q Consensus 207 ~GGaG~vLSr~ll~~L~~~~d~C~~~~~~~~-~~D~~Lg~Cl~~lGV~lt~ 256 (474)
..|+.+++++.+++++-. +|. .+ ..+ ++|..++.=+.+.|..+..
T Consensus 204 ~~g~~~~irr~~~~~iGg-fde---~~-~~~g~ED~dl~~R~~~~G~~i~~ 249 (472)
T 1xhb_A 204 MAGGLFSIDRDYFQEIGT-YDA---GM-DIWGGENLEISFRIWQCGGTLEI 249 (472)
T ss_dssp CCSSSEEEEHHHHHHTTS-CCT---TS-CTTCCCCSHHHHHHHHTTCEEEE
T ss_pred ccceeEEEEHHHHHHcCC-CCC---cc-cccCchhHHHHHHHHhcCCeEEE
Confidence 457788999999998753 222 11 223 6899998888888865544
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=56.62 E-value=38 Score=35.77 Aligned_cols=45 Identities=11% Similarity=0.140 Sum_probs=31.9
Q ss_pred ccCcceeecHHHHHHHHHHhhHhhhhccCCC-hhhHHHHHHHHHcCCceEe
Q 037329 207 FGGAGYALSYPLVEALAAKFDKCVEKYQNLY-ASDLMLYSCLADLGVTLTL 256 (474)
Q Consensus 207 ~GGaG~vLSr~ll~~L~~~~d~C~~~~~~~~-~~D~~Lg~Cl~~lGV~lt~ 256 (474)
..|+.+++++.+++++-. +|. .+ ..+ ++|..|..=+.+.|..+..
T Consensus 284 ~~g~~~~irr~~~~~iGg-fDe---~~-~~~g~ED~dl~~Rl~~~G~~i~~ 329 (570)
T 2d7i_A 284 MAGGLFAVDRKWFWELGG-YDP---GL-EIWGGEQYEISFKVWMCGGRMED 329 (570)
T ss_dssp CCSSSEEEEHHHHHHTTS-SCT---TC-CSSSSHHHHHHHHHHHTTCEEEE
T ss_pred ccceEEEEEHHHHHhcCC-CCC---cc-cccCcchHHHHHHHHhCCCeEEE
Confidence 457889999999998753 332 12 223 6999999888888866554
No 6
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=55.72 E-value=19 Score=33.55 Aligned_cols=114 Identities=13% Similarity=0.098 Sum_probs=67.3
Q ss_pred HHHHHHHhCCCCccEEEEEcCC---ccccHHHHHHHHhcCCCCCceEEEeccCCC----------CCCccccccccccCc
Q 037329 144 TILETFREGDEDVRWYVMADDD---TILFVDNLVEVLAKYDHTQYLYIGTNSECV----------SSNFHASFNMAFGGA 210 (474)
Q Consensus 144 ~v~e~~~~~~~~~kWfv~~DDD---Tf~~~~nL~~~L~~yD~~~p~YiG~~se~~----------~q~~~~~y~~a~GGa 210 (474)
++.++.. ..++++++++|.| .-+.++.+.++|.. ..++..|...... ......+.....+|+
T Consensus 44 lv~~Fl~--~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsYp~K~~~~~s~~a~~y~~~i~~~~V~d~~t 118 (203)
T 2c0n_A 44 ALDMFLE--MKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYYYLKTLRGYSVYRKDWEKEIFDGEVNGCGL 118 (203)
T ss_dssp HHHHHHH--CTTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEECBCTTSSSBSEESSSBCSSCCCEECSEECS
T ss_pred HHHHHHh--cCCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEeeccCCCccchHHHHHHHhccCceeeeccc
Confidence 3444443 5789999999999 99999999999953 5677777753211 000111223445566
Q ss_pred ce-eecHHHHHHHHHH-h---hHhhhhccCCChhhHHHHHHHHHcCCceEecCCCCccc
Q 037329 211 GY-ALSYPLVEALAAK-F---DKCVEKYQNLYASDLMLYSCLADLGVTLTLEKGFHQID 264 (474)
Q Consensus 211 G~-vLSr~ll~~L~~~-~---d~C~~~~~~~~~~D~~Lg~Cl~~lGV~lt~~~gfhQ~d 264 (474)
|| +++|+++++|... + .. ++.....|||+..-.-++..|-.+.....+|-.|
T Consensus 119 GF~lIkR~V~e~L~~p~fl~~~~--~e~~~~~gEdv~F~~~~k~~~~~~~~~~~~~~~~ 175 (203)
T 2c0n_A 119 GFTFIKREFLEKIKRPAFLAFKP--IESPHWIGEDVYFFSTHKPRTYALSSLKAYHFID 175 (203)
T ss_dssp SEEEEEHHHHTTSCSSCCCC-----------CCHHHHHHHHHCCCEEEEEEEEEEEESS
T ss_pred cEEEEhHHHHHHHhhhhhhcCCh--hhhccccCCceEEEeccccccccccccccceeec
Confidence 66 6799999998542 2 10 1122456788877665565554454444455443
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=51.07 E-value=11 Score=34.03 Aligned_cols=98 Identities=10% Similarity=0.053 Sum_probs=52.3
Q ss_pred CccEEEEEcCCccccHHHHHHHHhcCCC-CCceEEEeccCCCCCC-------------cccc----------c-------
Q 037329 155 DVRWYVMADDDTILFVDNLVEVLAKYDH-TQYLYIGTNSECVSSN-------------FHAS----------F------- 203 (474)
Q Consensus 155 ~~kWfv~~DDDTf~~~~nL~~~L~~yD~-~~p~YiG~~se~~~q~-------------~~~~----------y------- 203 (474)
..+|++++|+|.++..+.|.++++.+.. ...+.+|......... ..+. +
T Consensus 84 ~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (240)
T 3bcv_A 84 TGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYA 163 (240)
T ss_dssp CSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHH
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhh
Confidence 5699999999999987666655544322 2334333321100000 0000 0
Q ss_pred ----cccccCcceeecHHHHHHHHHHhhHhhhhccCCChhhHHHHHHHHHcCCceEe
Q 037329 204 ----NMAFGGAGYALSYPLVEALAAKFDKCVEKYQNLYASDLMLYSCLADLGVTLTL 256 (474)
Q Consensus 204 ----~~a~GGaG~vLSr~ll~~L~~~~d~C~~~~~~~~~~D~~Lg~Cl~~lGV~lt~ 256 (474)
.+...|++.++.+.+++++.-.++. .+ ...++|..+..=+...|-.+..
T Consensus 164 ~~~~~~~~~~~~~~~rr~~~~~~g~~f~~---~~-~~~~eD~~~~~r~~~~g~~i~~ 216 (240)
T 3bcv_A 164 REERAIQVSAKVVLYRRNLIEKKHLRFVS---ER-ILPSEDLIFNVDVLANSNIVCV 216 (240)
T ss_dssp HHHHHHHHTCSCEEEEHHHHHHTTCCCCC---TT-TCTTHHHHHHHHHHTTCSCEEE
T ss_pred ccccccccchhheeeeHHHHHHcCCccCC---CC-CccCCCHHHHHHHHHhCCEEEE
Confidence 0112367889999988885311221 11 1246999888777776655544
No 8
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=49.43 E-value=22 Score=39.48 Aligned_cols=97 Identities=12% Similarity=-0.011 Sum_probs=62.2
Q ss_pred CCccEEEEEcCCccccHHHHHHHHhcC--CCCCceEEEeccCCCC-------------CC--c-----------cccccc
Q 037329 154 EDVRWYVMADDDTILFVDNLVEVLAKY--DHTQYLYIGTNSECVS-------------SN--F-----------HASFNM 205 (474)
Q Consensus 154 ~~~kWfv~~DDDTf~~~~nL~~~L~~y--D~~~p~YiG~~se~~~-------------q~--~-----------~~~y~~ 205 (474)
.+.+|+++.|+|+.+..+.|.++++.+ |++-...-|....... +. . .++..
T Consensus 237 a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 315 (802)
T 4hg6_A 237 LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGA- 315 (802)
T ss_dssp CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCC-
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCc-
Confidence 367999999999999988888877766 4544444342221100 00 0 01112
Q ss_pred cccCcceeecHHHHHHHHHHhhHhhhhccCCChhhHHHHHHHHHcCCceEecC
Q 037329 206 AFGGAGYALSYPLVEALAAKFDKCVEKYQNLYASDLMLYSCLADLGVTLTLEK 258 (474)
Q Consensus 206 a~GGaG~vLSr~ll~~L~~~~d~C~~~~~~~~~~D~~Lg~Cl~~lGV~lt~~~ 258 (474)
.+.|++.++.+++++++.... ....+||..++.-+.+.|-+....+
T Consensus 316 ~~~G~~~~~Rr~al~~vGgf~-------~~~~~ED~~l~~rl~~~G~ri~~~~ 361 (802)
T 4hg6_A 316 FFCGSAAVLRRRALDEAGGFA-------GETITEDAETALEIHSRGWKSLYID 361 (802)
T ss_dssp CCCSSSEEEEHHHHHHHTTCC-------CSSSSHHHHHHHHHHTTTCCEEECC
T ss_pred eecccchhhhHHHHHHcCCcC-------CCCcchHHHHHHHHHHcCCeEEEec
Confidence 346788999999999874211 1235799999999998886655444
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=43.77 E-value=19 Score=38.14 Aligned_cols=47 Identities=17% Similarity=0.197 Sum_probs=32.8
Q ss_pred ccCcceeecHHHHHHHHHHhhHhhhhccCCC-hhhHHHHHHHHHcCCceEecC
Q 037329 207 FGGAGYALSYPLVEALAAKFDKCVEKYQNLY-ASDLMLYSCLADLGVTLTLEK 258 (474)
Q Consensus 207 ~GGaG~vLSr~ll~~L~~~~d~C~~~~~~~~-~~D~~Lg~Cl~~lGV~lt~~~ 258 (474)
..|+++++++.+++++.. ++. .+ ..+ ++|..++.=+.+.|..+...|
T Consensus 276 ~~g~~~~~rr~~l~~iGg-fde---~~-~~~g~ED~dl~~Rl~~~G~~i~~~p 323 (625)
T 2z86_A 276 FSGGNVAFAKKWLFRAGW-FDE---EF-THWGGEDNEFGYRLYREGCYFRSVE 323 (625)
T ss_dssp CCTTEEEEETHHHHHHCC-CCT---TC-SSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred EeeceeeeEHHHHHHhCC-Ccc---cc-ccCCcchhhhhhhHHhCCceEEEcc
Confidence 578899999999998742 221 11 223 699999988888886655443
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=42.61 E-value=15 Score=37.91 Aligned_cols=46 Identities=15% Similarity=0.268 Sum_probs=31.8
Q ss_pred ccCcceeecHHHHHHHHHHhhHhhhhccCCC-hhhHHHHHHHHHcCCceEec
Q 037329 207 FGGAGYALSYPLVEALAAKFDKCVEKYQNLY-ASDLMLYSCLADLGVTLTLE 257 (474)
Q Consensus 207 ~GGaG~vLSr~ll~~L~~~~d~C~~~~~~~~-~~D~~Lg~Cl~~lGV~lt~~ 257 (474)
..|+.+++++.+++++-. +|. .+ ..+ ++|..|..=+.+.|..+...
T Consensus 236 ~~g~~~~irr~~~~~iGg-fde---~~-~~~g~ED~dl~~Rl~~~G~~i~~~ 282 (501)
T 2ffu_A 236 IAGGLFVMDKFYFEELGK-YDM---MM-DVWGGENLEISFRVWQCGGSLEII 282 (501)
T ss_dssp CCSSSEEEEHHHHHHTTC-CCT---TC-CSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred ccceEEEEEHHHHHHhCC-CCc---cc-cccCcchHHHHHHHHhcCCeEEEc
Confidence 457889999999998753 232 11 223 79999988888787655443
No 11
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=23.26 E-value=49 Score=34.92 Aligned_cols=94 Identities=17% Similarity=0.110 Sum_probs=51.7
Q ss_pred CccEEEEEcCCccccHHHHHHHHhcC--CCCCceEEEeccC-CCCCC-----c---ccc----ccccccCcceeecHHHH
Q 037329 155 DVRWYVMADDDTILFVDNLVEVLAKY--DHTQYLYIGTNSE-CVSSN-----F---HAS----FNMAFGGAGYALSYPLV 219 (474)
Q Consensus 155 ~~kWfv~~DDDTf~~~~nL~~~L~~y--D~~~p~YiG~~se-~~~q~-----~---~~~----y~~a~GGaG~vLSr~ll 219 (474)
..+|++++|+|.++..+.|.++++.+ ++.-.+..|.... +.... . .+. ......|++.++.+.++
T Consensus 454 ~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 533 (625)
T 2z86_A 454 RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAW 533 (625)
T ss_dssp CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCSSCCHHHHTTSCCCCSCEEEEHHHH
T ss_pred CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccccCCHHHHhhcccCCceEEEEHHHH
Confidence 56999999999999887777766544 3333333332110 00000 0 000 01123466788888876
Q ss_pred HHHHHHhhHhhhhccCCChhhHHHHHHHHHcCCceE
Q 037329 220 EALAAKFDKCVEKYQNLYASDLMLYSCLADLGVTLT 255 (474)
Q Consensus 220 ~~L~~~~d~C~~~~~~~~~~D~~Lg~Cl~~lGV~lt 255 (474)
+++.. ++. . ...++|..+..-+.+.| ++.
T Consensus 534 ~~~gg-fd~---~--~~~~eD~dl~~r~~~~g-~~~ 562 (625)
T 2z86_A 534 NLTEG-FNE---S--ISNAVDYDMYLKLSEVG-PFK 562 (625)
T ss_dssp TTTTC-CCS---S--CSSCHHHHHHHHHTTTS-CEE
T ss_pred HHhCC-CCC---c--cCChHHHHHHHHHHHhC-CEE
Confidence 65432 221 1 12568998877776666 443
Done!