BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037330
(84 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8
PE=2 SV=2
Length = 220
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/82 (89%), Positives = 77/82 (93%), Gaps = 1/82 (1%)
Query: 3 DAPAT-EEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYIL 61
DA AT EEAKKS+HV+RKLEKRQ+ RTLD HIEEQFGSGRLLACI+SRPGQCGRADGYIL
Sbjct: 139 DAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYIL 198
Query: 62 EGKELEFYMKKLQRKKGKGAGA 83
EGKELEFYMKKLQRKKGKGA A
Sbjct: 199 EGKELEFYMKKLQRKKGKGASA 220
>sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2
Length = 221
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/78 (87%), Positives = 72/78 (92%)
Query: 6 ATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKE 65
A EE KKS+HV RKLEKR++ RTLDPHIEEQFGSGRLLACI+SRPGQCGRADGYILEGKE
Sbjct: 144 AAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKE 203
Query: 66 LEFYMKKLQRKKGKGAGA 83
LEFYMKKLQRKKGK A A
Sbjct: 204 LEFYMKKLQRKKGKSAVA 221
>sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2
SV=1
Length = 210
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/84 (80%), Positives = 74/84 (88%)
Query: 1 EGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYI 60
+G+A TEE KKS+HV RKLE RQ+ R LD H+EEQF SGRLLACIASRPGQCGRADGYI
Sbjct: 127 KGEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYI 186
Query: 61 LEGKELEFYMKKLQRKKGKGAGAA 84
LEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 187 LEGKELEFYMKKLQKKKGKNAGAA 210
>sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1
Length = 221
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/65 (83%), Positives = 59/65 (90%)
Query: 11 KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYM 70
KKS+HV KLEKRQ+ RTLD HIEEQFG G+LLACI+SRPGQCG+ADG ILEGKELEFYM
Sbjct: 147 KKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLACISSRPGQCGKADGDILEGKELEFYM 206
Query: 71 KKLQR 75
KKLQR
Sbjct: 207 KKLQR 211
>sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2
SV=1
Length = 222
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 55/60 (91%)
Query: 11 KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYM 70
KKS+H+LRK+ RQ+ R+LD HIE+QF SGRLLACI+SRPGQCGRADGYILEGKELEFYM
Sbjct: 151 KKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYILEGKELEFYM 210
>sp|Q8MLY8|RS8_DROME 40S ribosomal protein S8 OS=Drosophila melanogaster GN=RpS8 PE=1
SV=1
Length = 208
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 56/67 (83%)
Query: 11 KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYM 70
K+S V++K +RQK ++ +E+QF SGR+LACI+SRPGQCGR+DGYILEGKELEFY+
Sbjct: 142 KRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEFYL 201
Query: 71 KKLQRKK 77
KK++ KK
Sbjct: 202 KKIKSKK 208
>sp|Q7SYU0|RS8_XENLA 40S ribosomal protein S8 OS=Xenopus laevis GN=rps8 PE=2 SV=3
Length = 208
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 21 EKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 79
E+R+K + P +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ KKGK
Sbjct: 150 EERKKTAKISPLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKAKKGK 208
>sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus punctatus GN=rps8 PE=2 SV=3
Length = 208
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 52/60 (86%)
Query: 20 LEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 79
+KR+K+ + P ++EQF G+LLACI+SRPGQCGRADGY+LEGKELEFY++K++ KKGK
Sbjct: 149 FDKRRKNSKISPLLDEQFQQGKLLACISSRPGQCGRADGYVLEGKELEFYLRKIKAKKGK 208
>sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera GN=RpS8 PE=2 SV=2
Length = 208
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%)
Query: 11 KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYM 70
K+S K + RQ+ ++P +EEQF +GR+LACI+SRPGQCGR DGYILEGKELEFYM
Sbjct: 140 KRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSRPGQCGREDGYILEGKELEFYM 199
Query: 71 KKLQRKKGK 79
++++ KK K
Sbjct: 200 RRIKSKKAK 208
>sp|Q8WQI5|RS8_SPOFR 40S ribosomal protein S8 OS=Spodoptera frugiperda GN=RpS8 PE=2 SV=1
Length = 208
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 55/74 (74%)
Query: 6 ATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKE 65
A K+S +K RQ+ ++ +EEQF +GRLLAC+ASRPGQCGRADGYILEGKE
Sbjct: 135 AIINKKRSQKTAKKYLARQRLSKVESALEEQFHTGRLLACVASRPGQCGRADGYILEGKE 194
Query: 66 LEFYMKKLQRKKGK 79
LEFY++K++ K+ K
Sbjct: 195 LEFYLRKIKSKRAK 208
>sp|P62247|RS8_DANRE 40S ribosomal protein S8 OS=Danio rerio GN=rps8 PE=2 SV=2
Length = 208
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 49/57 (85%)
Query: 23 RQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 79
R+K + P +EEQF G+LLACI+SRPGQCGRADGY+LEGKELEFY++K++ KKGK
Sbjct: 152 RRKTAKISPLLEEQFLQGKLLACISSRPGQCGRADGYVLEGKELEFYLRKIKAKKGK 208
>sp|P62243|RS8_RAT 40S ribosomal protein S8 OS=Rattus norvegicus GN=Rps8 PE=1 SV=2
Length = 208
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 51/59 (86%)
Query: 21 EKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 79
++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ +KGK
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>sp|P62242|RS8_MOUSE 40S ribosomal protein S8 OS=Mus musculus GN=Rps8 PE=1 SV=2
Length = 208
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 51/59 (86%)
Query: 21 EKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 79
++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ +KGK
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>sp|Q4R6P8|RS8_MACFA 40S ribosomal protein S8 OS=Macaca fascicularis GN=RPS8 PE=2 SV=3
Length = 208
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 51/59 (86%)
Query: 21 EKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 79
++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ +KGK
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>sp|P62241|RS8_HUMAN 40S ribosomal protein S8 OS=Homo sapiens GN=RPS8 PE=1 SV=2
Length = 208
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 51/59 (86%)
Query: 21 EKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 79
++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ +KGK
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>sp|Q5E958|RS8_BOVIN 40S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=2 SV=3
Length = 208
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 51/59 (86%)
Query: 21 EKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 79
++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ +KGK
Sbjct: 150 DERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>sp|Q54E24|RS8_DICDI 40S ribosomal protein S8 OS=Dictyostelium discoideum GN=rps8 PE=1
SV=1
Length = 211
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 50/75 (66%)
Query: 3 DAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILE 62
D A + KKS+ +L KL R K R LD IE Q G GR A I SRPGQ G+ DGYILE
Sbjct: 134 DGEAEQVVKKSASLLAKLASRAKGRVLDSAIESQIGEGRFFARITSRPGQVGKCDGYILE 193
Query: 63 GKELEFYMKKLQRKK 77
KELEFY ++LQ+KK
Sbjct: 194 AKELEFYQRRLQKKK 208
>sp|P48156|RS8_CAEEL 40S ribosomal protein S8 OS=Caenorhabditis elegans GN=rps-8 PE=3
SV=1
Length = 208
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 53/69 (76%)
Query: 11 KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYM 70
K+S H ++K +RQK +D + EQF +GRLLA I+S PGQ G+A+GYILEGKEL+FY+
Sbjct: 140 KRSHHTMKKYTERQKTAAVDALLIEQFNTGRLLARISSSPGQVGQANGYILEGKELDFYL 199
Query: 71 KKLQRKKGK 79
+K++ KK K
Sbjct: 200 RKIRAKKAK 208
>sp|P0CX40|RS8B_YEAST 40S ribosomal protein S8-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS8B PE=1 SV=1
Length = 200
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%)
Query: 8 EEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELE 67
E KS + RK R ++ +E QF +GRL ACI+SRPGQ GR DGYILEG+EL
Sbjct: 131 ETVAKSKNAERKWAARAASAKIESSVESQFSAGRLYACISSRPGQSGRCDGYILEGEELA 190
Query: 68 FYMKKLQRKK 77
FY+++L KK
Sbjct: 191 FYLRRLTAKK 200
>sp|P0CX39|RS8A_YEAST 40S ribosomal protein S8-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS8A PE=1 SV=1
Length = 200
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%)
Query: 8 EEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELE 67
E KS + RK R ++ +E QF +GRL ACI+SRPGQ GR DGYILEG+EL
Sbjct: 131 ETVAKSKNAERKWAARAASAKIESSVESQFSAGRLYACISSRPGQSGRCDGYILEGEELA 190
Query: 68 FYMKKLQRKK 77
FY+++L KK
Sbjct: 191 FYLRRLTAKK 200
>sp|Q9P7B2|RS8B_SCHPO 40S ribosomal protein S8-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps8b PE=1 SV=1
Length = 200
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 12 KSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMK 71
KS HV RK R D +D +E QF +GRL A ++SRPGQ GR DGYILEG+EL FY++
Sbjct: 135 KSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLR 194
Query: 72 KLQRKK 77
++ KK
Sbjct: 195 RMAPKK 200
>sp|O14049|RS8A_SCHPO 40S ribosomal protein S8-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps8a PE=3 SV=1
Length = 200
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 12 KSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMK 71
KS HV RK R D +D +E QF +GRL A ++SRPGQ GR DGYILEG+EL FY++
Sbjct: 135 KSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLR 194
Query: 72 KLQRKK 77
++ KK
Sbjct: 195 RMAPKK 200
>sp|Q4UFS9|RS8_THEAN 40S ribosomal protein S8 OS=Theileria annulata GN=RPS8 PE=3 SV=1
Length = 184
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 35 EQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKK 77
EQF SGRLLACI+SRPGQCGR DGY+LEG+EL FY +++ +KK
Sbjct: 140 EQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 182
>sp|Q4N3P0|RS8_THEPA 40S ribosomal protein S8 OS=Theileria parva GN=RPS8 PE=3 SV=1
Length = 188
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 35 EQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKK 77
+QF SGRLLACI+SRPGQCGR DGY+LEG+EL FY +++ +KK
Sbjct: 144 DQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>sp|Q9ZT56|RS8_GRIJA 40S ribosomal protein S8 OS=Griffithsia japonica GN=RPS8 PE=2 SV=1
Length = 204
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 8 EEAKKSSHVLRKLEKRQKDRT-LDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKEL 66
EE+K S K EKR + R LD I+E F SGRL A IASRPGQ GRADGY+LEGKEL
Sbjct: 129 EESKFSKRHAGKQEKRCQTRLPLDEGIKELFQSGRLYASIASRPGQSGRADGYLLEGKEL 188
Query: 67 EFY 69
EFY
Sbjct: 189 EFY 191
>sp|P25204|RS8_LEIMA 40S ribosomal protein S8 OS=Leishmania major GN=RPS8A PE=3 SV=1
Length = 220
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 11 KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYM 70
K S + R+ +R+++ ++ I +Q GR+LA I SRPGQ GRADG +LEG EL+FY+
Sbjct: 153 KASPKLQREWTRRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYL 212
Query: 71 KKLQRKK 77
K+L++KK
Sbjct: 213 KRLEKKK 219
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,639,166
Number of Sequences: 539616
Number of extensions: 1218157
Number of successful extensions: 2103
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2076
Number of HSP's gapped (non-prelim): 28
length of query: 84
length of database: 191,569,459
effective HSP length: 55
effective length of query: 29
effective length of database: 161,890,579
effective search space: 4694826791
effective search space used: 4694826791
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)