Query 037330
Match_columns 84
No_of_seqs 104 out of 215
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 18:58:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037330.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037330hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g9pa_ g.3.6.2 (A:) Atracotox 56.0 2.6 0.00019 23.2 1.6 18 44-61 28-45 (45)
2 d1dx5i2 g.3.11.1 (I:388-422) T 53.6 2.2 0.00016 22.7 1.0 17 47-63 14-30 (35)
3 d1iica1 d.108.1.2 (A:34-218) N 50.3 2.4 0.00017 28.8 1.0 30 38-68 108-137 (185)
4 d1qvwa_ c.23.16.2 (A:) Hypothe 39.8 7.4 0.00054 26.1 2.2 40 29-68 119-163 (236)
5 d1ltqa1 c.108.1.9 (A:153-301) 38.9 14 0.001 21.1 3.1 23 31-53 43-65 (149)
6 d1eufa_ b.47.1.2 (A:) Duodenas 35.3 14 0.0011 22.2 2.9 33 39-75 189-221 (224)
7 d1wo8a1 c.24.1.2 (A:1-126) Met 31.2 6.7 0.00049 24.3 0.7 33 30-62 61-96 (126)
8 d1nn6a_ b.47.1.2 (A:) Chymase 30.2 27 0.002 21.0 3.5 34 38-75 186-219 (224)
9 d2f91a1 b.47.1.2 (A:16-244) Tr 28.8 23 0.0016 21.4 3.0 31 42-76 203-235 (237)
10 d1rxta1 d.108.1.2 (A:78-218) N 28.6 8 0.00058 25.3 0.8 16 38-53 64-79 (141)
11 d1iyka1 d.108.1.2 (A:60-224) N 25.4 11 0.00077 25.3 1.0 16 38-53 86-101 (165)
12 d1jqia2 e.6.1.1 (A:4-234) Buty 24.7 23 0.0016 22.2 2.5 32 33-64 112-155 (231)
13 d1vmda_ c.24.1.2 (A:) Methylgl 24.5 13 0.00096 23.9 1.3 32 30-61 71-105 (156)
14 d3rp2a_ b.47.1.2 (A:) Chymase 24.5 39 0.0028 20.2 3.5 33 39-75 189-221 (224)
15 d1ne9a1 d.108.1.4 (A:1-164) Pe 23.4 52 0.0038 20.5 4.1 39 39-77 50-98 (164)
16 d1ii5a_ c.94.1.1 (A:) Glutamat 21.3 21 0.0015 21.3 1.7 21 53-73 153-173 (226)
17 d2d29a2 e.6.1.1 (A:2-234) Acyl 21.2 39 0.0028 21.0 3.1 32 33-64 111-154 (233)
18 d3mdea2 e.6.1.1 (A:11-241) Med 21.1 45 0.0033 20.3 3.3 31 33-64 110-153 (231)
19 d1rbli_ d.73.1.1 (I:) Ribulose 20.0 23 0.0017 22.0 1.7 15 38-52 95-109 (109)
No 1
>d1g9pa_ g.3.6.2 (A:) Atracotoxin-hv2a {Funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=55.99 E-value=2.6 Score=23.22 Aligned_cols=18 Identities=44% Similarity=0.778 Sum_probs=14.5
Q ss_pred EEEeccCCcccccceeee
Q 037330 44 ACIASRPGQCGRADGYIL 61 (84)
Q Consensus 44 A~IsSRPGQ~GraDGyIL 61 (84)
.|++|-||-+|-.-|-||
T Consensus 28 scvssgpglvggilggil 45 (45)
T d1g9pa_ 28 SCVSSGPGLVGGILGGIL 45 (45)
T ss_dssp EEECCCSSCSSCSSCCCC
T ss_pred ceeccCCchhhheecccC
Confidence 599999999987666554
No 2
>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.55 E-value=2.2 Score=22.68 Aligned_cols=17 Identities=29% Similarity=0.749 Sum_probs=14.0
Q ss_pred eccCCcccccceeeecc
Q 037330 47 ASRPGQCGRADGYILEG 63 (84)
Q Consensus 47 sSRPGQ~GraDGyILEG 63 (84)
-+.|+-|--+|||||+.
T Consensus 14 P~~p~~C~CPeGyIlde 30 (35)
T d1dx5i2 14 PNTQASCECPEGYILDD 30 (35)
T ss_dssp TTSTTCEECCTTEEEET
T ss_pred CCCCCcccCCCceEecc
Confidence 35688888999999974
No 3
>d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=50.31 E-value=2.4 Score=28.76 Aligned_cols=30 Identities=23% Similarity=0.358 Sum_probs=19.4
Q ss_pred hcCceeEEEeccCCcccccceeeeccchHHH
Q 037330 38 GSGRLLACIASRPGQCGRADGYILEGKELEF 68 (84)
Q Consensus 38 ~~GrllA~IsSRPGQ~GraDGyILEGkELeF 68 (84)
.+++|+|+||+||=.+ +..|.++.=-+..|
T Consensus 108 ~~~KLvg~Is~~P~~i-~i~~~~~~~~~VnF 137 (185)
T d1iica1 108 ETQKLVAFISAIPVTL-GVRGKQVPSVEINF 137 (185)
T ss_dssp TTCCEEEEEEEEEEEE-EETTEEEEEEEEEE
T ss_pred cCCcEEEEEeeeEEEE-EEcCeEEEEEEEEE
Confidence 3689999999999887 33333443333333
No 4
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.79 E-value=7.4 Score=26.13 Aligned_cols=40 Identities=23% Similarity=0.445 Sum_probs=28.1
Q ss_pred CChHHHHHhhcCceeEEEeccCCc----ccccce-eeeccchHHH
Q 037330 29 LDPHIEEQFGSGRLLACIASRPGQ----CGRADG-YILEGKELEF 68 (84)
Q Consensus 29 v~~~L~eqf~~GrllA~IsSRPGQ----~GraDG-yILEGkELeF 68 (84)
+-..|.+.+.+|+++|.||.=|.- +...|| +||.|+.+.=
T Consensus 119 l~~li~~~~~~gk~vaAIChGp~~L~~~~~~~~g~~ll~Gk~vT~ 163 (236)
T d1qvwa_ 119 LQDIASEIYANGGVVAAVCHGPAMFDGLTDKKTGRPLIEGKSITG 163 (236)
T ss_dssp HHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTCSBTTTTCEECC
T ss_pred HHHHHHHHHhcCCeEEEehhhHHHHHHHhhcccccccccCceecc
Confidence 334577788999999999998842 234456 6888765433
No 5
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=38.85 E-value=14 Score=21.10 Aligned_cols=23 Identities=9% Similarity=-0.012 Sum_probs=17.9
Q ss_pred hHHHHHhhcCceeEEEeccCCcc
Q 037330 31 PHIEEQFGSGRLLACIASRPGQC 53 (84)
Q Consensus 31 ~~L~eqf~~GrllA~IsSRPGQ~ 53 (84)
..|......|..++.+|+||+-+
T Consensus 43 ~~l~~l~~~G~~Iii~T~R~~~~ 65 (149)
T d1ltqa1 43 ELSKMYALMGYQIVVVSGRESGT 65 (149)
T ss_dssp HHHHHHHHTTCEEEEEECSCCCC
T ss_pred HHHHHHHhccCeEEEEecCcHHH
Confidence 34555667899999999999754
No 6
>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}
Probab=35.27 E-value=14 Score=22.20 Aligned_cols=33 Identities=9% Similarity=0.187 Sum_probs=24.9
Q ss_pred cCceeEEEeccCCcccccceeeeccchHHHHHHHHHh
Q 037330 39 SGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 75 (84)
Q Consensus 39 ~GrllA~IsSRPGQ~GraDGyILEGkELeFY~kki~~ 75 (84)
.+.|++.++.-++.++.++.|+ .+.+|..+|+.
T Consensus 189 ~~~l~Gi~s~g~~~~~~p~vft----~V~~y~~WI~~ 221 (224)
T d1eufa_ 189 NGVAQGIVSYGRNDGTTPDVYT----RISSFLSWIHS 221 (224)
T ss_dssp TTEEEEEEEECCTTCCSCEEEE----EGGGTHHHHHH
T ss_pred cCEEEEEEEEcCCCCCCCeEEE----EHHHHHHHHHH
Confidence 4578888877677777777666 58889999874
No 7
>d1wo8a1 c.24.1.2 (A:1-126) Methylglyoxal synthase, MgsA {Thermus thermophilus [TaxId: 274]}
Probab=31.15 E-value=6.7 Score=24.25 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=24.5
Q ss_pred ChHHHHHhhcCceeEEE---eccCCcccccceeeec
Q 037330 30 DPHIEEQFGSGRLLACI---ASRPGQCGRADGYILE 62 (84)
Q Consensus 30 ~~~L~eqf~~GrllA~I---sSRPGQ~GraDGyILE 62 (84)
+|.+.+.+..|.+=.+| ...-++-.+.|||.|-
T Consensus 61 ~~~i~d~I~~g~IdlVIn~~~~~~~~~~~~D~~~iR 96 (126)
T d1wo8a1 61 DLQIGARVAEGKVLAVVFLQDPLTAKPHEPDVQALM 96 (126)
T ss_dssp HHHHHHHHHTTCEEEEEEECCTTSCCTTHHHHHHHH
T ss_pred CCCHHHHHHcCCccEEEEecCCCCCCcccccHHHHH
Confidence 47899999999999888 2233445578998753
No 8
>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.20 E-value=27 Score=20.96 Aligned_cols=34 Identities=6% Similarity=0.120 Sum_probs=25.8
Q ss_pred hcCceeEEEeccCCcccccceeeeccchHHHHHHHHHh
Q 037330 38 GSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 75 (84)
Q Consensus 38 ~~GrllA~IsSRPGQ~GraDGyILEGkELeFY~kki~~ 75 (84)
..+.|++.+|--++.++.++.|. .+.-|..+|+.
T Consensus 186 ~~~~l~GI~s~g~~~~~~p~vyt----~v~~y~~WI~~ 219 (224)
T d1nn6a_ 186 CAGVAQGIVSYGRSDAKPPAVFT----RISHYRPWINQ 219 (224)
T ss_dssp ETTEEEEEEEECCTTCCSCEEEE----EHHHHHHHHHH
T ss_pred ECCEEEEEEEECCCCCCCCeEEE----EHHHHHHHHHH
Confidence 35789999887888888888885 46667777764
No 9
>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}
Probab=28.76 E-value=23 Score=21.45 Aligned_cols=31 Identities=13% Similarity=0.217 Sum_probs=20.3
Q ss_pred eeEEEe--ccCCcccccceeeeccchHHHHHHHHHhh
Q 037330 42 LLACIA--SRPGQCGRADGYILEGKELEFYMKKLQRK 76 (84)
Q Consensus 42 llA~Is--SRPGQ~GraDGyILEGkELeFY~kki~~k 76 (84)
|+|..| ...+..+.++.|. .+.+|+.+|+.+
T Consensus 203 L~Gi~S~g~~c~~~~~p~v~t----~v~~y~~WI~~n 235 (237)
T d2f91a1 203 LAGIVSWGYGCARPGYPGVYT----EVSYHVDWIKAN 235 (237)
T ss_dssp EEEEEEEESSSSCTTCCEEEE----EGGGSHHHHHHH
T ss_pred EEEEEEeCCCCCCCCCCEEEE----EHHHHHHHHHHh
Confidence 777765 2444445555564 689999999753
No 10
>d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.60 E-value=8 Score=25.29 Aligned_cols=16 Identities=25% Similarity=0.445 Sum_probs=13.9
Q ss_pred hcCceeEEEeccCCcc
Q 037330 38 GSGRLLACIASRPGQC 53 (84)
Q Consensus 38 ~~GrllA~IsSRPGQ~ 53 (84)
.+++|+|.||++|=-+
T Consensus 64 ~~~kLVgfIs~~P~~i 79 (141)
T d1rxta1 64 SSRKLVGFISAIPANI 79 (141)
T ss_dssp SSSCEEEEECCEECCC
T ss_pred cCCeEEEEEeceEEEE
Confidence 4789999999999766
No 11
>d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]}
Probab=25.41 E-value=11 Score=25.32 Aligned_cols=16 Identities=38% Similarity=0.613 Sum_probs=13.4
Q ss_pred hcCceeEEEeccCCcc
Q 037330 38 GSGRLLACIASRPGQC 53 (84)
Q Consensus 38 ~~GrllA~IsSRPGQ~ 53 (84)
.+++|+|+||++|-.+
T Consensus 86 ~~~kLvgfIs~~P~~i 101 (165)
T d1iyka1 86 STGKLVAFIAATPVTF 101 (165)
T ss_dssp TTCCEEEEEEEEEEEE
T ss_pred cCCcEEEEEecceEEE
Confidence 3789999999999754
No 12
>d1jqia2 e.6.1.1 (A:4-234) Butyryl-CoA dehydrogenase, NM domains {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.75 E-value=23 Score=22.24 Aligned_cols=32 Identities=31% Similarity=0.695 Sum_probs=20.6
Q ss_pred HHHHhhcCceeEEEe-ccCCc---------cc--ccceeeeccc
Q 037330 33 IEEQFGSGRLLACIA-SRPGQ---------CG--RADGYILEGK 64 (84)
Q Consensus 33 L~eqf~~GrllA~Is-SRPGQ---------~G--raDGyILEGk 64 (84)
+...+.+|.+++|+. |-|+- +. ..|||+|.|.
T Consensus 112 ~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~a~~~~~~~~lnG~ 155 (231)
T d1jqia2 112 WITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGT 155 (231)
T ss_dssp HTGGGSSSSCCEEEECCBTTBSSSTTCCCCEEEECSSEEEEEEE
T ss_pred HhCcccCCCccccceeccCCCCccCcccceEEEEECCEEEEeee
Confidence 344577899888876 44541 11 1479999984
No 13
>d1vmda_ c.24.1.2 (A:) Methylglyoxal synthase, MgsA {Thermotoga maritima [TaxId: 2336]}
Probab=24.52 E-value=13 Score=23.93 Aligned_cols=32 Identities=22% Similarity=0.158 Sum_probs=25.3
Q ss_pred ChHHHHHhhcCceeEEEec---cCCcccccceeee
Q 037330 30 DPHIEEQFGSGRLLACIAS---RPGQCGRADGYIL 61 (84)
Q Consensus 30 ~~~L~eqf~~GrllA~IsS---RPGQ~GraDGyIL 61 (84)
+|.+.+.+..|.+-.+|-- --|+...+|||.|
T Consensus 71 ~p~i~d~I~~geI~lVIn~~d~~~~~~~~~D~~~I 105 (156)
T d1vmda_ 71 DQQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKAL 105 (156)
T ss_dssp HHHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHH
T ss_pred CCCHHHHHHcCCCCEEEECCCCCCCccccchHHHH
Confidence 5889999999999998833 3566678898865
No 14
>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}
Probab=24.52 E-value=39 Score=20.24 Aligned_cols=33 Identities=6% Similarity=0.087 Sum_probs=24.5
Q ss_pred cCceeEEEeccCCcccccceeeeccchHHHHHHHHHh
Q 037330 39 SGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 75 (84)
Q Consensus 39 ~GrllA~IsSRPGQ~GraDGyILEGkELeFY~kki~~ 75 (84)
.+.|++.+|=-++.++.++.|+ .+..|..+|+.
T Consensus 189 ~~~l~Gi~S~g~~~~~~p~vyt----~v~~~~~WI~~ 221 (224)
T d3rp2a_ 189 AGVAHGIVSYGHPDAKPPAIFT----RVSTYVPWINA 221 (224)
T ss_dssp TTEEEEEEEECCTTCCSCEEEE----EHHHHHHHHHH
T ss_pred cCEEEEEEEECCCCCCCCeEEE----EHHHHHHHHHH
Confidence 4678888776676677777775 58888888864
No 15
>d1ne9a1 d.108.1.4 (A:1-164) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]}
Probab=23.45 E-value=52 Score=20.45 Aligned_cols=39 Identities=13% Similarity=0.193 Sum_probs=24.7
Q ss_pred cCceeEE--EeccCCcccccceeeeccc--------hHHHHHHHHHhhh
Q 037330 39 SGRLLAC--IASRPGQCGRADGYILEGK--------ELEFYMKKLQRKK 77 (84)
Q Consensus 39 ~GrllA~--IsSRPGQ~GraDGyILEGk--------ELeFY~kki~~kK 77 (84)
.|.+.|+ |..|+.-.|..-+||-.|- -++|+++.+++-+
T Consensus 50 ~g~~va~a~vl~~~~~~g~~~~y~prGPv~d~~d~~ll~~~~~~l~~a~ 98 (164)
T d1ne9a1 50 QGAIIAAMSMLLGDTPTDKKFAYASKGPVMDVTDVDLLDRLVDEAVKAL 98 (164)
T ss_dssp TSCEEEEEEEEEECCSSSSEEEEETTCCBSCTTCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEEeecCCceEEEEecCCCcCCcCCHHHHHHHHHHHHHHH
Confidence 4677664 5556555677777877763 3467777665433
No 16
>d1ii5a_ c.94.1.1 (A:) Glutamate receptor ligand binding core {Synechocystis sp., GluR0 [TaxId: 1143]}
Probab=21.33 E-value=21 Score=21.34 Aligned_cols=21 Identities=10% Similarity=0.322 Sum_probs=17.8
Q ss_pred ccccceeeeccchHHHHHHHH
Q 037330 53 CGRADGYILEGKELEFYMKKL 73 (84)
Q Consensus 53 ~GraDGyILEGkELeFY~kki 73 (84)
.||+|++|...-.+.+|++..
T Consensus 153 ~g~~d~~~~~~~~~~~~~~~~ 173 (226)
T d1ii5a_ 153 KKQVEAVMFDRPALIYYTRQN 173 (226)
T ss_dssp TTSCSEEEEEHHHHHHHHHHC
T ss_pred CCCeeeEeccchhHHHHHhhc
Confidence 399999999988899988754
No 17
>d2d29a2 e.6.1.1 (A:2-234) Acyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=21.19 E-value=39 Score=21.02 Aligned_cols=32 Identities=25% Similarity=0.455 Sum_probs=19.9
Q ss_pred HHHHhhcCceeEEEe-ccCCc-----------ccccceeeeccc
Q 037330 33 IEEQFGSGRLLACIA-SRPGQ-----------CGRADGYILEGK 64 (84)
Q Consensus 33 L~eqf~~GrllA~Is-SRPGQ-----------~GraDGyILEGk 64 (84)
+..++.+|..++|+. |-|+- .-..|||+|.|.
T Consensus 111 ~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~a~~~~~~~~lnG~ 154 (233)
T d2d29a2 111 FLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGT 154 (233)
T ss_dssp HHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEE
T ss_pred hCccccCCCEEEEEEecCCCCCCcccceeEEEEEECCEEEEecc
Confidence 344577899888764 34441 012479999984
No 18
>d3mdea2 e.6.1.1 (A:11-241) Medium chain acyl-CoA dehydrogenase, NM domains {Pig (Sus scrofa) [TaxId: 9823]}
Probab=21.07 E-value=45 Score=20.26 Aligned_cols=31 Identities=26% Similarity=0.621 Sum_probs=20.0
Q ss_pred HHHHhhcCceeEEEe-ccCCccc------------ccceeeeccc
Q 037330 33 IEEQFGSGRLLACIA-SRPGQCG------------RADGYILEGK 64 (84)
Q Consensus 33 L~eqf~~GrllA~Is-SRPGQ~G------------raDGyILEGk 64 (84)
+...+.+|.+++|+. |-|+ .| ..|||+|.|.
T Consensus 110 ~l~~l~~g~~~~~~a~tEp~-~Gsd~~~~~t~a~~~~~g~~lnG~ 153 (231)
T d3mdea2 110 YLGRMTEEPLMCAYCVTEPG-AGSDVAGIKTKAEKKGDEYIINGQ 153 (231)
T ss_dssp HHHHHTTSCCEEEEECCBTT-BSSCGGGCCCEEEEETTEEEEEEE
T ss_pred ccchhcCCceEEEEEecCCC-CCCCccCCEEEEEEECCEEEEEEE
Confidence 444567888887764 4554 21 2379999985
No 19
>d1rbli_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Synechococcus sp., strain pcc 6301 [TaxId: 1131]}
Probab=20.02 E-value=23 Score=22.00 Aligned_cols=15 Identities=27% Similarity=0.441 Sum_probs=12.3
Q ss_pred hcCceeEEEeccCCc
Q 037330 38 GSGRLLACIASRPGQ 52 (84)
Q Consensus 38 ~~GrllA~IsSRPGQ 52 (84)
.+-+.++.|..||||
T Consensus 95 ~q~r~~~fIV~RP~~ 109 (109)
T d1rbli_ 95 KECQTSSFIVHRPGR 109 (109)
T ss_dssp TTEEEEEEEEECCCC
T ss_pred CCEEEEEEEEeCCCC
Confidence 455688999999997
Done!