Query 037333
Match_columns 158
No_of_seqs 126 out of 1114
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 19:03:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037333.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037333hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m7h_A Putidacin L1; monocot m 100.0 4.5E-35 1.5E-39 239.3 5.3 135 1-158 22-167 (276)
2 1dlp_A Lectin scafet precursor 100.0 6.6E-30 2.3E-34 203.4 11.2 131 1-158 16-153 (236)
3 4h3o_A Lectin; cadmium, plant 99.9 6.5E-24 2.2E-28 150.4 14.0 96 2-117 10-105 (105)
4 3a0c_A Mannose/sialic acid-bin 99.9 7.8E-22 2.7E-26 140.5 14.0 101 2-122 10-110 (110)
5 1b2p_A Protein (lectin); manno 99.9 1.6E-21 5.5E-26 140.8 12.9 99 2-119 17-117 (119)
6 1xd5_A Gastrodianin-1, antifun 99.9 1E-20 3.5E-25 134.8 12.8 101 2-121 10-110 (112)
7 2dpf_A Curculin; sweet taste, 99.8 1.1E-20 3.8E-25 135.2 12.3 101 2-123 11-111 (115)
8 3dzw_A Agglutinin; lectin, man 99.8 4.1E-20 1.4E-24 131.2 11.6 98 2-120 10-107 (109)
9 3mez_B Mannose-specific lectin 99.8 2.1E-18 7.1E-23 123.3 13.1 98 2-118 15-112 (113)
10 3r0e_B Lectin; carbohydrate bi 99.8 1.2E-18 4E-23 124.1 10.3 95 2-118 15-109 (110)
11 3r0e_A Lectin; carbohydrate bi 99.7 1.9E-17 6.4E-22 117.7 10.6 93 2-118 12-104 (109)
12 3mez_A Mannose-specific lectin 99.7 1.3E-16 4.3E-21 113.7 10.7 96 2-118 11-108 (111)
13 3a0c_A Mannose/sialic acid-bin 99.6 1.4E-14 4.8E-19 102.7 8.7 61 56-122 21-81 (110)
14 1b2p_A Protein (lectin); manno 99.5 6E-14 2E-18 100.9 8.3 61 56-122 31-91 (119)
15 1xd5_A Gastrodianin-1, antifun 99.5 1.1E-13 3.9E-18 98.1 7.7 61 55-122 19-79 (112)
16 2dpf_A Curculin; sweet taste, 99.5 1.8E-13 6.3E-18 97.5 8.4 61 56-122 21-81 (115)
17 3mez_B Mannose-specific lectin 99.4 3.1E-13 1.1E-17 96.3 7.3 65 51-120 20-85 (113)
18 3m7h_A Putidacin L1; monocot m 99.4 1.2E-12 4.1E-17 106.5 11.7 90 12-120 163-252 (276)
19 3dzw_A Agglutinin; lectin, man 99.3 5.9E-12 2E-16 88.9 8.5 60 56-121 20-79 (109)
20 3mez_A Mannose-specific lectin 99.3 3.8E-12 1.3E-16 90.4 5.7 58 56-119 21-78 (111)
21 3r0e_B Lectin; carbohydrate bi 99.3 6.4E-12 2.2E-16 89.0 6.9 58 56-120 25-82 (110)
22 4h3o_A Lectin; cadmium, plant 99.3 1.1E-11 3.8E-16 87.2 7.5 58 57-120 21-79 (105)
23 3r0e_A Lectin; carbohydrate bi 99.2 4.3E-11 1.5E-15 84.6 6.4 57 55-120 21-77 (109)
24 1dlp_A Lectin scafet precursor 98.7 3.2E-08 1.1E-12 78.0 8.7 81 12-104 149-229 (236)
25 3no2_A Uncharacterized protein 77.3 9.2 0.00031 29.4 7.5 53 63-118 144-203 (276)
26 3no2_A Uncharacterized protein 76.2 20 0.00067 27.4 9.2 78 39-117 24-114 (276)
27 3q7m_A Lipoprotein YFGL, BAMB; 73.3 11 0.00038 29.5 7.2 25 58-82 55-81 (376)
28 3q7m_A Lipoprotein YFGL, BAMB; 59.1 60 0.002 25.1 9.6 57 58-118 241-304 (376)
29 1w6s_A Methanol dehydrogenase 45.8 83 0.0028 27.3 8.2 73 41-117 41-147 (599)
30 1kb0_A Quinohemoprotein alcoho 42.7 56 0.0019 28.6 6.7 74 41-118 56-155 (677)
31 1kv9_A Type II quinohemoprotei 42.3 57 0.0019 28.4 6.7 74 41-118 45-144 (668)
32 1yiq_A Quinohemoprotein alcoho 41.5 83 0.0028 27.5 7.6 74 41-118 49-148 (689)
33 2ad6_A Methanol dehydrogenase 41.4 94 0.0032 26.5 7.8 73 41-117 41-141 (571)
34 1flg_A Protein (quinoprotein e 40.5 96 0.0033 26.6 7.8 74 40-117 44-143 (582)
35 1q7f_A NHL, brain tumor CG1071 40.3 1.1E+02 0.0036 22.4 7.6 57 58-117 211-278 (286)
36 1xkp_C Chaperone protein YSCB; 34.8 88 0.003 22.4 5.4 17 89-105 80-96 (143)
37 2ad6_A Methanol dehydrogenase 34.4 1.7E+02 0.0057 24.9 8.3 59 58-119 117-194 (571)
38 2hz6_A Endoplasmic reticulum t 31.7 71 0.0024 25.2 5.2 51 61-116 15-74 (369)
39 2be1_A Serine/threonine-protei 30.2 78 0.0027 25.6 5.2 76 38-117 28-137 (339)
40 2be1_A Serine/threonine-protei 28.7 1.6E+02 0.0054 23.8 6.8 56 58-116 13-82 (339)
41 1zla_K Latent nuclear antigen; 23.8 27 0.00094 17.4 0.8 12 127-138 4-15 (26)
42 1yiq_A Quinohemoprotein alcoho 23.2 2.2E+02 0.0075 24.8 7.1 66 38-104 463-535 (689)
43 1flg_A Protein (quinoprotein e 21.1 2.6E+02 0.009 23.8 7.1 66 39-105 475-547 (582)
44 1w6s_A Methanol dehydrogenase 20.1 2.6E+02 0.0087 24.2 6.9 67 38-105 461-534 (599)
No 1
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*
Probab=100.00 E-value=4.5e-35 Score=239.26 Aligned_cols=135 Identities=24% Similarity=0.306 Sum_probs=113.0
Q ss_pred CCCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCC----CceEEEecCCCEEE--ecCCC
Q 037333 1 SLSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDS----SGLLVVNETGNLVL--TSQNK 74 (158)
Q Consensus 1 ~L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~----~~~l~l~~dG~Lvl--~d~~g 74 (158)
+|.+|++|+|++|.|+||||+++ +.|+ |+ +.+ +||+|||+.|+.+. +++|+|+.||+||| .|..+
T Consensus 22 ~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G~Lvl~~~~~~~ 92 (276)
T 3m7h_A 22 TLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSR 92 (276)
T ss_dssp EBCTTCEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEEESSSEEEEEGGG
T ss_pred EecCCCEEEcCCCcEEEEEECCC---CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeCCCcEEEEEeCCCC
Confidence 47789999999999999999654 3555 66 556 99999999998764 78899999999999 67778
Q ss_pred ceEEeecCCCC-----CCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCCCCCccCCCcEeeccccCCCeeEEEEcCCC
Q 037333 75 SVVWSANLSKE-----VQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDFKTGLERRITSWKSS 149 (158)
Q Consensus 75 ~~iWss~~~~~-----~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~Ptdtllpgq~l~~~~~~g~~~~l~s~~s~ 149 (158)
.+||++++... .....| +|+|+|||||++ +.+|||| |||||+||||+|+.+..+| +.| ++.
T Consensus 93 ~~vWst~~~~~~~~~~~~~~~a-~L~d~GNlVl~~------~~~lWqS--~ptdtlLpg~~~~~~l~~g--~~L---~S~ 158 (276)
T 3m7h_A 93 RRVWLTDNSTFTSNDQWNRTHL-VLQDDGNIVLVD------SLALWNG--TPAIPLVPGAIDSLLLAPG--SEL---VQG 158 (276)
T ss_dssp TEEEEECCCCCCCTTHHHHEEE-EECTTSCEEEEE------EEEEEES--CTTSCCCCSCTTCEEECSS--EEE---CTT
T ss_pred CEEEEeCCCcccccccCCceEE-EEeCCCCEEecC------CceeeCc--ccccccccccccccccccC--ccc---ccC
Confidence 89999998642 123455 999999999995 4799999 9999999999998888888 567 578
Q ss_pred CCCCCcccC
Q 037333 150 DDPSPGDFI 158 (158)
Q Consensus 150 ~d~s~G~f~ 158 (158)
.||++|.|.
T Consensus 159 ~dps~G~fs 167 (276)
T 3m7h_A 159 VVYGAGASK 167 (276)
T ss_dssp CEEEETTEE
T ss_pred CCCCCceEE
Confidence 899999873
No 2
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1
Probab=99.96 E-value=6.6e-30 Score=203.41 Aligned_cols=131 Identities=16% Similarity=0.289 Sum_probs=101.7
Q ss_pred CCCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEee
Q 037333 1 SLSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSA 80 (158)
Q Consensus 1 ~L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss 80 (158)
+|.+|+.| ++|.|+|||+.+++ +.+++ ..++||+|||+.| ..|.|+|++||+|||+|.++.+||++
T Consensus 16 ~L~~g~~l--~~g~f~l~f~~~gn-----l~ly~----~~~~vW~an~~~~---~~~~l~l~~dGnLvl~d~~~~~vW~s 81 (236)
T 1dlp_A 16 TLHAAQSL--ELSSFRFTMQSDCN-----LVLFD----SDVRVWASNTAGA---TGCRAVLQSDGLLVILTAQNTIRWSS 81 (236)
T ss_dssp CCCTTCEE--CSTTEEEEECTTSC-----EEEEE----SSSEEECCCCCSC---SCCBCCBCSSSCBCCBCTTTCCSCCC
T ss_pred EECCCCEE--EcCCEEEEECCCCc-----EEEEE----CCEEEEECCCCCC---CCeEEEEcCCCcEEEEcCCCcEEEeC
Confidence 47788888 69999999998765 34444 3799999999987 47899999999999999989999999
Q ss_pred cCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCCCCCcc-CCCcEeeccc-cCCC-----eeEEEEcCCCCCCC
Q 037333 81 NLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDYPSDTL-LPGMKLGWDF-KTGL-----ERRITSWKSSDDPS 153 (158)
Q Consensus 81 ~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~Ptdtl-lpgq~l~~~~-~~g~-----~~~l~s~~s~~d~s 153 (158)
++........+ +|+|+|||||++. ++||||+||+||+ ||+| +.+. .+|. .+.|+ +..||+
T Consensus 82 ~~~~~~~~~~~-~l~d~Gnlvl~~~-------~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~L~---s~~d~s 148 (236)
T 1dlp_A 82 GTKGSIGNYVL-VLQPDRTVTIYGP-------GLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQTLH---ATQSLQ 148 (236)
T ss_dssp CCCCCSSCCEE-EECSSSCEEEECS-------EEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCEEC---SSCCCB
T ss_pred CccccCCcEEE-EEeCCCCEEEecC-------CEEECCCCCCcccccCCc--cceEEecCCcCCCccceEE---cCcEee
Confidence 98643333455 9999999999932 7999999999777 5554 3332 3342 34777 578899
Q ss_pred CcccC
Q 037333 154 PGDFI 158 (158)
Q Consensus 154 ~G~f~ 158 (158)
+|.|.
T Consensus 149 ~G~~~ 153 (236)
T 1dlp_A 149 LSPYR 153 (236)
T ss_dssp CSSCE
T ss_pred cCcEE
Confidence 99873
No 3
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=99.91 E-value=6.5e-24 Score=150.35 Aligned_cols=96 Identities=19% Similarity=0.370 Sum_probs=81.2
Q ss_pred CCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEeec
Q 037333 2 LSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSAN 81 (158)
Q Consensus 2 L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss~ 81 (158)
|.+||+|.| |.|+|.|+.+++ |+++. ..++||+||++.|.. ..|.|+|+.||+|||+|.++.+||+|+
T Consensus 10 L~~g~~L~s--g~y~l~~q~DgN-----Lvly~----~~~~vW~ant~~~~~-~~~~L~l~~dGnLvL~d~~~~~vWss~ 77 (105)
T 4h3o_A 10 LYAGQSLDV--EPYHFIMQDDCN-----LVLYD----HSTSTWASNTEIGGK-SGCSAVLQSDGNFVVYDSSGRSLWASH 77 (105)
T ss_dssp ECTTCEEEE--TTEEEEECTTSC-----EEEEE----TTEEEEECCCCCTTC-CSCEEEECTTSCEEEECTTCCEEEECC
T ss_pred EcCCCEEEE--CCEEEEECCCCe-----EEEEE----CCEEEEEecCCCCCC-ccEEEEEeCCccEEEECCCcEEEEEec
Confidence 677889977 889999999987 66654 468999999999865 468999999999999999999999999
Q ss_pred CCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEe
Q 037333 82 LSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQS 117 (158)
Q Consensus 82 ~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqS 117 (158)
+........+ +|+||||||||+. +||||
T Consensus 78 t~~~~~~~~l-~L~ddGNlVly~~-------~~W~S 105 (105)
T 4h3o_A 78 STRGSGNYIL-ILQDDGNVIIYGS-------DIWST 105 (105)
T ss_dssp CCCCSSCEEE-EECTTSCEEEEES-------EEEEC
T ss_pred CCCCCCCEEE-EEeCCCeEEEECC-------cEecC
Confidence 8754433455 9999999999965 59998
No 4
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=99.88 E-value=7.8e-22 Score=140.47 Aligned_cols=101 Identities=25% Similarity=0.397 Sum_probs=83.3
Q ss_pred CCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEeec
Q 037333 2 LSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSAN 81 (158)
Q Consensus 2 L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss~ 81 (158)
|.+|+.|+ ++|.|+|+|+.+++ | |+|. ..++||.+|+..+. ..+.++|++||||||+|.++.+||++.
T Consensus 10 L~~g~~l~-~~~~~~l~~~~dGn-----l-vl~~---~~~~vW~sn~~~~~--~~~~l~l~~dGNLVl~~~~~~~~W~S~ 77 (110)
T 3a0c_A 10 LFTGHSLE-VGPSYRLIMQGDCN-----F-VLYD---SGKPVWASNTGGLG--SGCRLTLHNNGNLVIYDQSNRVIWQTK 77 (110)
T ss_dssp ECTTCEEE-ETTTEEEEECTTSC-----E-EEEE---TTEEEEECCCTTSC--SSCEEEECTTSCEEEECTTCCEEEECC
T ss_pred ECCCCEEE-ECCCEEEEEcCCCc-----E-EEEE---CCEEEEECCCCCCC--CcEEEEEeCCCCEEEECCCCcEEEecC
Confidence 67889999 99999999999886 4 3465 36899999998762 467999999999999998889999999
Q ss_pred CCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCCCC
Q 037333 82 LSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDYPS 122 (158)
Q Consensus 82 ~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~Pt 122 (158)
+........+ +|+++|||||++. ++||||+||.
T Consensus 78 t~~~~g~~~l-~l~~dGnlvl~~~-------~~W~S~~~~~ 110 (110)
T 3a0c_A 78 TNGKEDHYVL-VLQQDRNVVIYGP-------VVWATGSGPA 110 (110)
T ss_dssp CCCSSSCCEE-EECTTSCEEEECS-------EEEECSCCC-
T ss_pred CCCCCCCEEE-EEeCCccEEEECC-------CEecCCCcCC
Confidence 8654333345 9999999999843 7999999984
No 5
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=99.87 E-value=1.6e-21 Score=140.84 Aligned_cols=99 Identities=19% Similarity=0.364 Sum_probs=81.4
Q ss_pred CCCCCeEE--eCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEe
Q 037333 2 LSDGRTLV--SKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWS 79 (158)
Q Consensus 2 L~~~~~L~--S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWs 79 (158)
|.+|+.|+ |++|.|+|+|+.+++ | ++|.. .++||.+|++.+ ..++.++|++||||||+|.++.+||+
T Consensus 17 L~~g~~l~~~S~~g~~~L~~~~dgn-----l-vly~~---~~~vW~sn~~~~--~~~~~l~l~~dGNLVl~d~~~~~lW~ 85 (119)
T 1b2p_A 17 LHATESLEILFGTHVYRFIMQTDCN-----L-VLYDN---NNPIWATNTGGL--GNGCRAVLQPDGVLVVITNENVTVWQ 85 (119)
T ss_dssp EETTCEEEEEETTEEEEEEECTTSC-----E-EEEET---TEEEEECCCTTS--CSSCEEEECTTSCEEEECTTCCEEEE
T ss_pred EcCCCEEEEeCCCCCEEEEEecCCC-----E-EEEEC---CEEEEeCCCccC--CCceEEEEccCCEEEEEeCCCcEEEc
Confidence 66788999 999999999999876 3 45753 789999999876 34689999999999999988899999
Q ss_pred ecCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCC
Q 037333 80 ANLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFD 119 (158)
Q Consensus 80 s~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd 119 (158)
+.+........+ +|+|+|||||++. ++|||-.
T Consensus 86 S~~~~~~g~~~l-~l~~~Gnlvl~~~-------~~W~Sg~ 117 (119)
T 1b2p_A 86 SPVAGKAGHYVL-VLQPDRNVVIYGD-------ALWATQT 117 (119)
T ss_dssp CSCCCCSSCEEE-EECTTSCEEEEES-------EEEECCC
T ss_pred CCCCCCCCCEEE-EEECCCcEEEECc-------cEeCCCC
Confidence 997643323345 9999999999952 7999953
No 6
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=99.85 E-value=1e-20 Score=134.77 Aligned_cols=101 Identities=23% Similarity=0.442 Sum_probs=81.8
Q ss_pred CCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEeec
Q 037333 2 LSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSAN 81 (158)
Q Consensus 2 L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss~ 81 (158)
|.+|++| ++|.|+|+|+.+++ |.+ |.. .++||.+|+..+ ...+.++|+++|||||+| .+.+||++.
T Consensus 10 L~~g~~L--~~~~~~L~~~~dgn-----lvl-~~~---~~~vW~sn~~~~--~~~~~l~l~~~GNLvl~d-~~~~~W~S~ 75 (112)
T 1xd5_A 10 LDTGGSL--AEGGYLFIIQNDCN-----LVL-YDN---NRAVWASGTNGK--ASGCVLKMQNDGNLVIYS-GSRAIWASN 75 (112)
T ss_dssp ECTTCEE--EETTEEEEECTTSC-----EEE-EET---TEEEEECCCTTS--CSSEEEEECTTSCEEEEE-TTEEEEECC
T ss_pred ECCCCEE--eCCCEEEEEcCCCc-----EEE-EEC---CEEEEeCCCcCC--CCCEEEEEeCCCCEEEEc-CCEEEEECC
Confidence 6778888 68999999999886 444 543 689999998754 346899999999999999 788999998
Q ss_pred CCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCCC
Q 037333 82 LSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDYP 121 (158)
Q Consensus 82 ~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~P 121 (158)
+........+ +|+++|||||++. .+.++||||++.
T Consensus 76 ~~~~~g~~~l-~l~~dGnlvl~~~----~~~~~W~S~~~~ 110 (112)
T 1xd5_A 76 TNRQNGNYYL-ILQRDRNVVIYDN----SNNAIWATHTNV 110 (112)
T ss_dssp CCCSCCCCEE-EECTTSCEEEECT----TSCEEEECCCCC
T ss_pred ccCCCCCEEE-EEeCCCcEEEECC----CCceEEECCCcc
Confidence 7644333455 9999999999976 567999999875
No 7
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=99.85 E-value=1.1e-20 Score=135.24 Aligned_cols=101 Identities=22% Similarity=0.327 Sum_probs=81.0
Q ss_pred CCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEeec
Q 037333 2 LSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSAN 81 (158)
Q Consensus 2 L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss~ 81 (158)
|.+|+.|+ +|.|+|+|+.+++ |.+ |. ..+++|.+|+..|. ..+.|+|+++|||||+|.++.+||++.
T Consensus 11 L~~g~~L~--~g~~~L~~~~dgn-----lvl-y~---~~~~vW~sn~~~~~--~~~~l~l~~~GnLvl~d~~~~~vW~S~ 77 (115)
T 2dpf_A 11 LHADHSLQ--AGAYTLTIQNKCN-----LVK-YQ---NGRQIWASNTDRRG--SGCRLTLLSDGNLVIYDHNNNDVWGSA 77 (115)
T ss_dssp EETTEEEE--ETTEEEEECTTSC-----EEE-EE---TTEEEEECSCTTSC--SSCEEEECTTSCEEEECTTCCEEEECC
T ss_pred ECCCCEEE--CCCEEEEEcCCCc-----EEE-Ee---CCEEEEeCCCCCCC--CceEEEECCCCcEEEECCCceEEEEcC
Confidence 55677887 8999999998875 444 54 37899999998873 468999999999999998888999999
Q ss_pred CCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCCCCC
Q 037333 82 LSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDYPSD 123 (158)
Q Consensus 82 ~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~Ptd 123 (158)
+........+ +|+++|||||++. ++||||.++..
T Consensus 78 ~~~~~g~~~l-~l~~dGnlvl~~~-------~~W~S~~~~~~ 111 (115)
T 2dpf_A 78 CWGDNGKYAL-VLQKDGRFVIYGP-------VLWSLGPNGCR 111 (115)
T ss_dssp CCCSSSCCEE-EECTTSCEEEECS-------EEECSSTTCBC
T ss_pred CCCCCCCEEE-EEeCCCeEEEECC-------CEEECCCCCCc
Confidence 8643333455 9999999999932 79999987653
No 8
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=99.83 E-value=4.1e-20 Score=131.25 Aligned_cols=98 Identities=24% Similarity=0.380 Sum_probs=78.9
Q ss_pred CCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEeec
Q 037333 2 LSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSAN 81 (158)
Q Consensus 2 L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss~ 81 (158)
|.+|+.|+ +|.|+|.|+.+++ |.+ |.. .+++|.+|+..+ ...+.|+|++||||||+|.++.++|+++
T Consensus 10 L~~g~~L~--~g~~~L~~q~dGn-----Lvl-y~~---~~~vW~snt~~~--~~~~~l~l~~dGNLvl~~~~~~~~W~S~ 76 (109)
T 3dzw_A 10 LSPGEFLN--NGRYVFIMQEDCN-----LVL-YDV---DKPIWATNTGGL--DRRCHLSMQSDGNLVVYSPRNNPIWASN 76 (109)
T ss_dssp ECTTCEEE--ETTEEEEECTTSC-----EEE-EET---TEEEEECCCTTS--SSSCEEEECTTSCEEEECTTSCEEEECC
T ss_pred eCCCCEEE--CCCEEEEEcCCCc-----EEE-EeC---CEEEEECCcccC--CCCEEEEEeCCCCEEEECCCCCEEEECC
Confidence 56777885 7999999999886 444 543 589999999875 2468999999999999998888999999
Q ss_pred CCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCC
Q 037333 82 LSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDY 120 (158)
Q Consensus 82 ~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~ 120 (158)
+........+ +|+||||||||+. +||+|-.+
T Consensus 77 t~~~~~~~~~-~L~ddGNlvly~~-------~~W~s~t~ 107 (109)
T 3dzw_A 77 TGGENGNYVC-VLQKDRNVVIYGT-------ARWATGTN 107 (109)
T ss_dssp CCCSSSCEEE-EECTTSCEEEEES-------CCCCCCCC
T ss_pred CCCCCCCEEE-EEeCCCEEEEECC-------CEEeCCCc
Confidence 8654433345 9999999999964 69999644
No 9
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.79 E-value=2.1e-18 Score=123.27 Aligned_cols=98 Identities=16% Similarity=0.268 Sum_probs=76.4
Q ss_pred CCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEeec
Q 037333 2 LSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSAN 81 (158)
Q Consensus 2 L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss~ 81 (158)
|.+|+.|. +|.|.|.|+.+++ |.++.. ...+++|.+|+..+ ...+.|+|++||||||+|.++.++|+++
T Consensus 15 L~~g~~L~--~g~~~L~~q~dGN-----LvL~~~--~~~~~vWssnt~~~--~~~~~l~l~~dGNLVl~d~~~~~iW~S~ 83 (113)
T 3mez_B 15 MYDNAQLA--TRDYSLVMRDDCN-----LVLTKG--SKTNIVWESGTSGR--GQHCFMRLGHSGELDITDDRLNTVFVSN 83 (113)
T ss_dssp EETTCEEE--ETTEEEEECTTSC-----EEEEET--TTTEEEEECCCTTS--CSSCEEEECTTSCEEEECTTSCEEEECS
T ss_pred ECCCCEeE--cCCEEEEEcCCCE-----EEEEEC--CCCEEEEECCcccC--CcCEEEEEeCCCcEEEECCCCCEEEECC
Confidence 34556665 5899999999886 666432 13689999999765 2468999999999999998888999999
Q ss_pred CCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeC
Q 037333 82 LSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSF 118 (158)
Q Consensus 82 ~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSf 118 (158)
+........+ +|+||||||||+. +||+|-
T Consensus 84 t~~~~~~~~~-~L~~dGnlvly~~-------~~W~s~ 112 (113)
T 3mez_B 84 TVGQEGDYVL-ILQINGQAVVYGP-------AVWSTA 112 (113)
T ss_dssp CCCSSSCCEE-EECTTSCEEEECS-------EEEESC
T ss_pred CcCCCCCEEE-EEcCCceEEEecC-------CEecCC
Confidence 8654333455 9999999999953 799984
No 10
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=99.78 E-value=1.2e-18 Score=124.11 Aligned_cols=95 Identities=20% Similarity=0.327 Sum_probs=74.1
Q ss_pred CCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEeec
Q 037333 2 LSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSAN 81 (158)
Q Consensus 2 L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss~ 81 (158)
|.+|+.|+| |.|+|.|+.+++ |.+ |.. .++|.+|+... ...+.|+|++||||||+|.++.++|+++
T Consensus 15 L~~g~~L~s--g~~~L~~q~dGn-----Lvl-~~~----~~vW~snt~~~--~~~~~l~l~~dGNLvl~d~~~~~iW~S~ 80 (110)
T 3r0e_B 15 LYGDGRLTA--KNHQLVMQGDCN-----LVL-YGG----KYGWQSNTHGN--GEHCFLRLNHKGELIIKDDDFKTIWSSR 80 (110)
T ss_dssp EETTEEEEC--SSCEEEECTTSC-----EEE-ECS----SSCEECCCTTS--SSSCEEEECTTSCEEEECTTCCEEEECC
T ss_pred ecCCCEEEe--CCEEEEEcCCCe-----EEE-ECC----eEEEECCCcCC--CcCEEEEEeCCCcEEEEeCCCCEEEEcC
Confidence 455667776 569999998876 655 532 47999998763 2457999999999999998889999999
Q ss_pred CCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeC
Q 037333 82 LSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSF 118 (158)
Q Consensus 82 ~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSf 118 (158)
+........+ +|+||||||||+. +||+|-
T Consensus 81 t~~~~~~~~~-~L~~dGNlvly~~-------~~W~t~ 109 (110)
T 3r0e_B 81 SSSKQGEYVL-ILQDDGFGVIYGP-------AIFETS 109 (110)
T ss_dssp CCCSSSCCEE-EECTTSCEEEECS-------EEEESC
T ss_pred CcCCCCCEEE-EEcCCccEEEecC-------CEecCC
Confidence 8643333455 9999999999953 799984
No 11
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=99.73 E-value=1.9e-17 Score=117.65 Aligned_cols=93 Identities=23% Similarity=0.372 Sum_probs=73.0
Q ss_pred CCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEeec
Q 037333 2 LSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSAN 81 (158)
Q Consensus 2 L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss~ 81 (158)
|.+|+.| .+|.|.|.|+.+++ |.+ |. . +|.+|+..+ ...+.|+|++||+|||+|.++.++|+++
T Consensus 12 L~~g~~L--~~g~~~L~~q~dGN-----Lvl-~~----~--~Wssnt~~~--~~~~~l~l~~dGnLvl~d~~~~~vWss~ 75 (109)
T 3r0e_A 12 LDTEGHL--KNGDFDLVMQDDCN-----LVL-YN----G--NWQSNTANN--GRDCKLTLTDYGELVIKNGDGSTVWKSG 75 (109)
T ss_dssp ECTTCEE--EETTEEEEECTTSC-----EEE-ET----T--TEECCCTTS--CSSCEEEECTTSCEEEECTTSCEEEECC
T ss_pred cCCCCEe--ECCCEEEEEecCCe-----EEE-Ee----C--eEEcCCCCC--CCcEEEEEcCCCeEEEEeCCCCEEEcCC
Confidence 4556666 57999999999887 544 52 1 699998764 2468999999999999998888999998
Q ss_pred CCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeC
Q 037333 82 LSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSF 118 (158)
Q Consensus 82 ~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSf 118 (158)
+........+ +|+||||||||+. +||+|-
T Consensus 76 t~~~~~~~~~-~L~~dGNlvly~~-------~~W~s~ 104 (109)
T 3r0e_A 76 AQSVKGNYAA-VVHPDGRLVVFGP-------SVFKID 104 (109)
T ss_dssp CCCSSSCCEE-EEETTTEEEEECS-------EEEEEC
T ss_pred CcCCCcCEEE-EEcCCCeEEEEec-------CEECCC
Confidence 8643323455 9999999999953 799984
No 12
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.70 E-value=1.3e-16 Score=113.68 Aligned_cols=96 Identities=18% Similarity=0.230 Sum_probs=72.9
Q ss_pred CCCCCeEEeCCCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCc-eEEee
Q 037333 2 LSDGRTLVSKEGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKS-VVWSA 80 (158)
Q Consensus 2 L~~~~~L~S~ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~-~iWss 80 (158)
|.+|+.| .+|.|.|.|+.+++ |.+ |.. .. +|.+++..+ ...|.++|++||||||++.++. +||++
T Consensus 11 L~~g~~L--~~g~~~L~~q~dGn-----Lvl-~~~---~~-vW~snt~~~--~~~~~l~l~~dGNLVl~~~~~~~~vW~S 76 (111)
T 3mez_A 11 IHTDNQL--SYESAAFVMQGDCN-----LVL-YNE---AG-GFQSNTHGR--GVDCTLRLNNRGQLEIHSANSNTPVWVY 76 (111)
T ss_dssp ECTTCEE--EETTEEEEECTTSC-----EEE-ECS---SC-CEECCCTTS--CSSCEEEECTTSCEEEECSSCSSCSEEE
T ss_pred eCCCCEE--ecCCEEEEEccCCe-----EEE-ECC---CC-EEECCcccC--CcCEEEEEcCCCcEEEEeCCCCEEEEEe
Confidence 5567777 47999999999887 555 532 23 999998765 2368999999999999998765 59999
Q ss_pred cCCC-CCCcceEEEeccCCCEEEecCCCCCCCeEEEEeC
Q 037333 81 NLSK-EVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSF 118 (158)
Q Consensus 81 ~~~~-~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSf 118 (158)
++.. .+.+...++|++|||||||+ .+||+|-
T Consensus 77 ~t~~~~~~~~~~l~Lq~dGNlvly~-------~~~W~s~ 108 (111)
T 3mez_A 77 PRSVNTVRGNYAATLGPDQHVTIYG-------PAIWSTP 108 (111)
T ss_dssp SSSCCCCSSCCEEEECTTSCEEEEC-------SEEEECC
T ss_pred ccccCCCCcCEEEEECCCCeEEEec-------cCEEccC
Confidence 9642 22223334999999999995 3799985
No 13
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=99.56 E-value=1.4e-14 Score=102.74 Aligned_cols=61 Identities=26% Similarity=0.364 Sum_probs=52.4
Q ss_pred CceEEEecCCCEEEecCCCceEEeecCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCCCC
Q 037333 56 SGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDYPS 122 (158)
Q Consensus 56 ~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~Pt 122 (158)
..+|.|+.||+|||++ .+.+||++++......+.+ +|+++|||||++. .+.+|||||.+|.
T Consensus 21 ~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l-~l~~dGNLVl~~~----~~~~~W~S~t~~~ 81 (110)
T 3a0c_A 21 SYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRL-TLHNNGNLVIYDQ----SNRVIWQTKTNGK 81 (110)
T ss_dssp TEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEE-EECTTSCEEEECT----TCCEEEECCCCCS
T ss_pred CEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEE-EEeCCCCEEEECC----CCcEEEecCCCCC
Confidence 5689999999999999 4789999998755444566 9999999999987 6789999999886
No 14
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=99.50 E-value=6e-14 Score=100.95 Aligned_cols=61 Identities=21% Similarity=0.238 Sum_probs=52.2
Q ss_pred CceEEEecCCCEEEecCCCceEEeecCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCCCC
Q 037333 56 SGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDYPS 122 (158)
Q Consensus 56 ~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~Pt 122 (158)
..+|.|+.||+|||++. +.+||++++.....++.+ +|+++|||||++. ++.+|||||.+|.
T Consensus 31 ~~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l-~l~~dGNLVl~d~----~~~~lW~S~~~~~ 91 (119)
T 1b2p_A 31 VYRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRA-VLQPDGVLVVITN----ENVTVWQSPVAGK 91 (119)
T ss_dssp EEEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEE-EECTTSCEEEECT----TCCEEEECSCCCC
T ss_pred CEEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEE-EEccCCEEEEEeC----CCcEEEcCCCCCC
Confidence 45799999999999997 789999998755434566 9999999999987 6789999999886
No 15
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=99.47 E-value=1.1e-13 Score=98.06 Aligned_cols=61 Identities=23% Similarity=0.440 Sum_probs=51.1
Q ss_pred CCceEEEecCCCEEEecCCCceEEeecCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCCCC
Q 037333 55 SSGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDYPS 122 (158)
Q Consensus 55 ~~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~Pt 122 (158)
...+|.|+.||+|||++. +.+||++++......+.+ +|+++|||||++. +.+|||||.+|.
T Consensus 19 ~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l-~l~~~GNLvl~d~-----~~~~W~S~~~~~ 79 (112)
T 1xd5_A 19 GGYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVL-KMQNDGNLVIYSG-----SRAIWASNTNRQ 79 (112)
T ss_dssp TTEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEE-EECTTSCEEEEET-----TEEEEECCCCCS
T ss_pred CCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEE-EEeCCCCEEEEcC-----CEEEEECCccCC
Confidence 356899999999999997 789999998654334566 9999999999973 479999999886
No 16
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=99.46 E-value=1.8e-13 Score=97.49 Aligned_cols=61 Identities=25% Similarity=0.392 Sum_probs=51.7
Q ss_pred CceEEEecCCCEEEecCCCceEEeecCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCCCC
Q 037333 56 SGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDYPS 122 (158)
Q Consensus 56 ~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~Pt 122 (158)
..+|.|+.||+|||++ .+.++|++++..+...+.+ +|+++|||||++. ++.+|||||++|.
T Consensus 21 ~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l-~l~~~GnLvl~d~----~~~~vW~S~~~~~ 81 (115)
T 2dpf_A 21 AYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRL-TLLSDGNLVIYDH----NNNDVWGSACWGD 81 (115)
T ss_dssp TEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEE-EECTTSCEEEECT----TCCEEEECCCCCS
T ss_pred CEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEE-EECCCCcEEEECC----CceEEEEcCCCCC
Confidence 4679999999999998 4789999998655434566 9999999999987 5789999999976
No 17
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.42 E-value=3.1e-13 Score=96.25 Aligned_cols=65 Identities=25% Similarity=0.312 Sum_probs=52.5
Q ss_pred CCCCCCceEEEecCCCEEEecC-CCceEEeecCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCC
Q 037333 51 PINDSSGLLVVNETGNLVLTSQ-NKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDY 120 (158)
Q Consensus 51 p~~~~~~~l~l~~dG~Lvl~d~-~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~ 120 (158)
|+......|.|+.||||||++. .+.++|++++.....++.+ +|+++|||||++. ++.+||+|..+
T Consensus 20 ~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l-~l~~dGNLVl~d~----~~~~iW~S~t~ 85 (113)
T 3mez_B 20 QLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFM-RLGHSGELDITDD----RLNTVFVSNTV 85 (113)
T ss_dssp EEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEE-EECTTSCEEEECT----TSCEEEECSCC
T ss_pred EeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEE-EEeCCCcEEEECC----CCCEEEECCCc
Confidence 4443456899999999999997 4789999998754434566 9999999999987 56799999763
No 18
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*
Probab=99.42 E-value=1.2e-12 Score=106.49 Aligned_cols=90 Identities=22% Similarity=0.450 Sum_probs=70.5
Q ss_pred CCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEeecCCCCCCcceE
Q 037333 12 EGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVV 91 (158)
Q Consensus 12 ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~ 91 (158)
.|.|.+.|+++++ +.+ |.. ...++|.+++..+ + .+.+.|+.+|+|+++|.++.++|++.+.... ...+
T Consensus 163 ~G~fsl~l~~dGn-----lvL-y~~--~~~~yW~Sgt~~~--~-~~~l~l~~dGnLvl~d~~~~~vWsS~t~~~~-~~rl 230 (276)
T 3m7h_A 163 AGASKLVFQGDGN-----LVA-YGP--NGAATWNAGTQGK--G-AVRAVFQGDGNLVVYGAGNAVLWHSHTGGHA-SAVL 230 (276)
T ss_dssp ETTEEEEECTTSC-----EEE-ECT--TSSEEEECCCTTT--T-CCEEEECTTSCEEEECTTSCEEEECSCTTCT-TCEE
T ss_pred CceEEEeecCCce-----EEE-EeC--CCeEEEECCCCCC--c-cEEEEEcCCCeEEEEeCCCcEEEEecCCCCC-CEEE
Confidence 5788888876653 334 432 3589999998766 2 3789999999999999877899999986443 3456
Q ss_pred EEeccCCCEEEecCCCCCCCeEEEEeCCC
Q 037333 92 LQLLDSGNLVLRGERDGGSETYLWQSFDY 120 (158)
Q Consensus 92 ~~L~d~GNLVl~~~~~~~~~~~iWqSfd~ 120 (158)
+|++|||||||+. .++||||++
T Consensus 231 -~Ld~dGnLvly~~------~~~Wqsf~~ 252 (276)
T 3m7h_A 231 -RLQANGSIAILDE------KPVWARFGF 252 (276)
T ss_dssp -EECTTSCEEEEEE------EEEEESSSC
T ss_pred -EEcCCccEEEEcC------CCeEEccCc
Confidence 9999999999954 589999986
No 19
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=99.32 E-value=5.9e-12 Score=88.89 Aligned_cols=60 Identities=22% Similarity=0.331 Sum_probs=50.0
Q ss_pred CceEEEecCCCEEEecCCCceEEeecCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCCC
Q 037333 56 SGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDYP 121 (158)
Q Consensus 56 ~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~P 121 (158)
...|.|+.||+|||++. +.++|++++......+.+ +|+++|||||++. .+.+||+|....
T Consensus 20 ~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l-~l~~dGNLvl~~~----~~~~~W~S~t~~ 79 (109)
T 3dzw_A 20 RYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHL-SMQSDGNLVVYSP----RNNPIWASNTGG 79 (109)
T ss_dssp TEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEE-EECTTSCEEEECT----TSCEEEECCCCC
T ss_pred CEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEE-EEeCCCCEEEECC----CCCEEEECCCCC
Confidence 45799999999999997 689999998754434566 9999999999987 568999998653
No 20
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.28 E-value=3.8e-12 Score=90.36 Aligned_cols=58 Identities=22% Similarity=0.272 Sum_probs=47.0
Q ss_pred CceEEEecCCCEEEecCCCceEEeecCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCC
Q 037333 56 SGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFD 119 (158)
Q Consensus 56 ~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd 119 (158)
...|.|+.||||||++..+ +|++++......+.+ +|+++|||||++.. ...+||+|..
T Consensus 21 ~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l-~l~~dGNLVl~~~~---~~~~vW~S~t 78 (111)
T 3mez_A 21 SAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTL-RLNNRGQLEIHSAN---SNTPVWVYPR 78 (111)
T ss_dssp TEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEE-EECTTSCEEEECSS---CSSCSEEESS
T ss_pred CEEEEEccCCeEEEECCCC--EEECCcccCCcCEEE-EEcCCCcEEEEeCC---CCEEEEEecc
Confidence 5689999999999999765 999998755434566 99999999999872 3346999984
No 21
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=99.28 E-value=6.4e-12 Score=89.02 Aligned_cols=58 Identities=22% Similarity=0.365 Sum_probs=48.3
Q ss_pred CceEEEecCCCEEEecCCCceEEeecCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCC
Q 037333 56 SGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDY 120 (158)
Q Consensus 56 ~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~ 120 (158)
...|.|+.||||||++. .++|++++...+..+.+ +|+++|||||++. ++.+||+|..+
T Consensus 25 ~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l-~l~~dGNLvl~d~----~~~~iW~S~t~ 82 (110)
T 3r0e_B 25 NHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFL-RLNHKGELIIKDD----DFKTIWSSRSS 82 (110)
T ss_dssp SCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEE-EECTTSCEEEECT----TCCEEEECCCC
T ss_pred CEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEE-EEeCCCcEEEEeC----CCCEEEEcCCc
Confidence 46899999999999986 58999998754434566 9999999999987 56899999763
No 22
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=99.27 E-value=1.1e-11 Score=87.17 Aligned_cols=58 Identities=24% Similarity=0.364 Sum_probs=48.3
Q ss_pred ceEEEecCCCEEEecCCCceEEeecCCCCCC-cceEEEeccCCCEEEecCCCCCCCeEEEEeCCC
Q 037333 57 GLLVVNETGNLVLTSQNKSVVWSANLSKEVQ-TPVVLQLLDSGNLVLRGERDGGSETYLWQSFDY 120 (158)
Q Consensus 57 ~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~-~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~ 120 (158)
-.|.|+.|||||||+. +.+||++++..+.. .+.+ .|++||||||++. .+.+||+|...
T Consensus 21 y~l~~q~DgNLvly~~-~~~vW~ant~~~~~~~~~L-~l~~dGnLvL~d~----~~~~vWss~t~ 79 (105)
T 4h3o_A 21 YHFIMQDDCNLVLYDH-STSTWASNTEIGGKSGCSA-VLQSDGNFVVYDS----SGRSLWASHST 79 (105)
T ss_dssp EEEEECTTSCEEEEET-TEEEEECCCCCTTCCSCEE-EECTTSCEEEECT----TCCEEEECCCC
T ss_pred EEEEECCCCeEEEEEC-CEEEEEecCCCCCCccEEE-EEeCCccEEEECC----CcEEEEEecCC
Confidence 4799999999999985 67999999865443 3455 9999999999998 77899999653
No 23
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=99.17 E-value=4.3e-11 Score=84.59 Aligned_cols=57 Identities=26% Similarity=0.390 Sum_probs=46.9
Q ss_pred CCceEEEecCCCEEEecCCCceEEeecCCCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEeCCC
Q 037333 55 SSGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQSFDY 120 (158)
Q Consensus 55 ~~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSfd~ 120 (158)
....|.|+.||||||++. +|++++...+.+..+ +|+++|||||++. ++.++|+|...
T Consensus 21 g~~~L~~q~dGNLvl~~~----~Wssnt~~~~~~~~l-~l~~dGnLvl~d~----~~~~vWss~t~ 77 (109)
T 3r0e_A 21 GDFDLVMQDDCNLVLYNG----NWQSNTANNGRDCKL-TLTDYGELVIKNG----DGSTVWKSGAQ 77 (109)
T ss_dssp TTEEEEECTTSCEEEETT----TEECCCTTSCSSCEE-EECTTSCEEEECT----TSCEEEECCCC
T ss_pred CCEEEEEecCCeEEEEeC----eEEcCCCCCCCcEEE-EEcCCCeEEEEeC----CCCEEEcCCCc
Confidence 356899999999999984 799998765434566 9999999999987 56899998654
No 24
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1
Probab=98.75 E-value=3.2e-08 Score=77.96 Aligned_cols=81 Identities=17% Similarity=0.282 Sum_probs=47.6
Q ss_pred CCeEEEEEEcCCCCCceEEEEEEecCCCCcEEEEcCCCCCCCCCCceEEEecCCCEEEecCCCceEEeecCCCCCCcceE
Q 037333 12 EGSFELGFFSPGSSKNRYVGIWYENMPVKTVVWVANRINPINDSSGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVV 91 (158)
Q Consensus 12 ng~F~lgF~~~~~~~~~~l~i~~~~~~~~~vvW~an~~~p~~~~~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~ 91 (158)
+|.|.|.|.++++ |.++. ...++|.++..... ..+.++|+.+|+|++++.++.++|++.+........+
T Consensus 149 ~G~~~l~l~~dG~-----LvL~~----~~~~~W~s~~~~~~--~~~~~~L~~~Gnl~ly~~~~~~vw~s~~~~~~~~~rl 217 (236)
T 1dlp_A 149 LSPYRLSMETDCN-----LVLFD----RDDRVWSTNTAGKG--TGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVF 217 (236)
T ss_dssp CSSCEEEEETTTE-----EEEEB----TTBCCSCCCCCSSC--SSCEEEEETTTEEEEEETTTEEEEECCCCCSSSCCEE
T ss_pred cCcEEEEECCCCc-----EEEEc----CCEeEEeCCCcCCC--CceEEEECCCCcEEEEeCCCcEEEEeCCCCCCCCEEE
Confidence 3777777776552 33332 12456766653321 2456777777777777766667777765432222234
Q ss_pred EEeccCCCEEEec
Q 037333 92 LQLLDSGNLVLRG 104 (158)
Q Consensus 92 ~~L~d~GNLVl~~ 104 (158)
+|+++|+|++|.
T Consensus 218 -~Ld~dG~l~ly~ 229 (236)
T 1dlp_A 218 -VLQPDRNLAIYG 229 (236)
T ss_dssp -EECSSSCEEEEC
T ss_pred -EEcCCCcEEEeC
Confidence 777777777773
No 25
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=77.28 E-value=9.2 Score=29.38 Aligned_cols=53 Identities=17% Similarity=0.112 Sum_probs=33.4
Q ss_pred cCCCEEEecCCCceEEeecCCCCCCcceEEEeccCCCEEEecCCC-------CCCCeEEEEeC
Q 037333 63 ETGNLVLTSQNKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGERD-------GGSETYLWQSF 118 (158)
Q Consensus 63 ~dG~Lvl~d~~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~~-------~~~~~~iWqSf 118 (158)
.+|.++.+|..|+.+|+....... ..+ ....+||+++.+... ..+++++|+=-
T Consensus 144 ~~~~v~~~d~~G~~~w~~~~~~~~--~~~-~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 144 ATSEVREIAPNGQLLNSVKLSGTP--FSS-AFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp TTTEEEEECTTSCEEEEEECSSCC--CEE-EECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred CCCEEEEECCCCCEEEEEECCCCc--cce-eEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 467788888889999998764322 123 445667766654311 13478899853
No 26
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=76.20 E-value=20 Score=27.45 Aligned_cols=78 Identities=13% Similarity=0.219 Sum_probs=41.9
Q ss_pred CCcEEEEcCCCCC--CC----CCCceEEEecCCCEEEecCCCceEEeecCCCCCCcceEEEeccCCCEEEecCC-C----
Q 037333 39 VKTVVWVANRINP--IN----DSSGLLVVNETGNLVLTSQNKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGER-D---- 107 (158)
Q Consensus 39 ~~~vvW~an~~~p--~~----~~~~~l~l~~dG~Lvl~d~~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~~-~---- 107 (158)
...++|....... +. ...+.+.+..++.+..+|..|+.+|+-..........+ ..+.+|++++-+.. .
T Consensus 24 tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~~~-~~~~dG~~lv~~~~~~~~v~ 102 (276)
T 3no2_A 24 TKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTA-RILPDGNALVAWCGHPSTIL 102 (276)
T ss_dssp TTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEEEE-EECTTSCEEEEEESTTEEEE
T ss_pred CCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCcccccc-EECCCCCEEEEecCCCCEEE
Confidence 5677888766431 11 01223333444556666777889999876422111234 56677777665431 0
Q ss_pred --CCCCeEEEEe
Q 037333 108 --GGSETYLWQS 117 (158)
Q Consensus 108 --~~~~~~iWqS 117 (158)
..+++.+|+-
T Consensus 103 ~vd~~Gk~l~~~ 114 (276)
T 3no2_A 103 EVNMKGEVLSKT 114 (276)
T ss_dssp EECTTSCEEEEE
T ss_pred EEeCCCCEEEEE
Confidence 0156677773
No 27
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=73.31 E-value=11 Score=29.45 Aligned_cols=25 Identities=16% Similarity=0.388 Sum_probs=16.0
Q ss_pred eEEEe-cCCCEEEecC-CCceEEeecC
Q 037333 58 LLVVN-ETGNLVLTSQ-NKSVVWSANL 82 (158)
Q Consensus 58 ~l~l~-~dG~Lvl~d~-~g~~iWss~~ 82 (158)
.+.+. .+|.|+.+|. .|+.+|+...
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~ 81 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKEIWSVSL 81 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCeEEEEEccCCceeeeecC
Confidence 34443 3567777776 5778887765
No 28
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=59.13 E-value=60 Score=25.09 Aligned_cols=57 Identities=12% Similarity=0.222 Sum_probs=35.8
Q ss_pred eEEEe-cCCCEEEecC-CCceEEeecCCCCC-----CcceEEEeccCCCEEEecCCCCCCCeEEEEeC
Q 037333 58 LLVVN-ETGNLVLTSQ-NKSVVWSANLSKEV-----QTPVVLQLLDSGNLVLRGERDGGSETYLWQSF 118 (158)
Q Consensus 58 ~l~l~-~dG~Lvl~d~-~g~~iWss~~~~~~-----~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqSf 118 (158)
.+.+. .+|.|+.+|. .|+.+|+....... .+... ...++|.|+.++. .+++++|+.-
T Consensus 241 ~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~l~-~~~~~g~l~~~d~---~tG~~~w~~~ 304 (376)
T 3q7m_A 241 VVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIY-LVDQNDRVMALTI---DGGVTLWTQS 304 (376)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEETTEEE-EEETTCCEEEEET---TTCCEEEEEC
T ss_pred EEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEECCEEE-EEcCCCeEEEEEC---CCCcEEEeec
Confidence 44443 4788888886 68899998753211 11111 3345677777776 3788999874
No 29
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=45.78 E-value=83 Score=27.31 Aligned_cols=73 Identities=12% Similarity=0.297 Sum_probs=43.9
Q ss_pred cEEEEcCCC-------CCCCCCCceEEEec--CCCEEEecC--CCceEEeecCCCCC------------Cc-ce------
Q 037333 41 TVVWVANRI-------NPINDSSGLLVVNE--TGNLVLTSQ--NKSVVWSANLSKEV------------QT-PV------ 90 (158)
Q Consensus 41 ~vvW~an~~-------~p~~~~~~~l~l~~--dG~Lvl~d~--~g~~iWss~~~~~~------------~~-~~------ 90 (158)
.++|..... .|+.. ...+.+.. +|.|+-+|. .|+.+|+....... .+ .+
T Consensus 41 ~~~W~~~~g~~~g~~~tP~v~-~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~ 119 (599)
T 1w6s_A 41 RPAWTFSTGLLNGHEGAPLVV-DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGK 119 (599)
T ss_dssp EEEEEEECSCCSCCCSCCEEE-TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSS
T ss_pred cEEEEEECCCCCCceeccEEE-CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCc
Confidence 567775432 34332 44565655 588888886 78999998753210 00 00
Q ss_pred ----EEEeccCCCEEEecCCCCCCCeEEEEe
Q 037333 91 ----VLQLLDSGNLVLRGERDGGSETYLWQS 117 (158)
Q Consensus 91 ----~~~L~d~GNLVl~~~~~~~~~~~iWqS 117 (158)
+..-..+|.|+-.|. .+++++|+-
T Consensus 120 ~~~rV~v~t~dg~l~AlDa---~TG~~~W~~ 147 (599)
T 1w6s_A 120 TPALILKTQLDGNVAALNA---ETGETVWKV 147 (599)
T ss_dssp SCCEEEEECTTSEEEEEET---TTCCEEEEE
T ss_pred ceeEEEEEcCCCEEEEEEC---CCCCEEEee
Confidence 113345677777776 389999984
No 30
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=42.74 E-value=56 Score=28.55 Aligned_cols=74 Identities=14% Similarity=0.249 Sum_probs=44.0
Q ss_pred cEEEEcCCC-------CCCCCCCceEEEec-CCCEEEecC-CCceEEeecCCCCC------------C-----cceEEEe
Q 037333 41 TVVWVANRI-------NPINDSSGLLVVNE-TGNLVLTSQ-NKSVVWSANLSKEV------------Q-----TPVVLQL 94 (158)
Q Consensus 41 ~vvW~an~~-------~p~~~~~~~l~l~~-dG~Lvl~d~-~g~~iWss~~~~~~------------~-----~~~~~~L 94 (158)
.++|..... .|+. ....+.+.. +|.|+-+|. .|+.+|+....... . ...+..-
T Consensus 56 ~~~W~~~~~~~~g~~~~P~v-~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~ 134 (677)
T 1kb0_A 56 GLAWSYNLESTRGVEATPVV-VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVG 134 (677)
T ss_dssp EEEEEEECCCCSCCCCCCEE-ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEE
T ss_pred cEEEEEECCCCCCceeCCEE-ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEE
Confidence 567876532 2332 134555544 588888885 68899998754210 0 1112133
Q ss_pred ccCCCEEEecCCCCCCCeEEEEeC
Q 037333 95 LDSGNLVLRGERDGGSETYLWQSF 118 (158)
Q Consensus 95 ~d~GNLVl~~~~~~~~~~~iWqSf 118 (158)
..+|.|+..|. .+++++|+--
T Consensus 135 ~~dg~l~alD~---~tG~~~W~~~ 155 (677)
T 1kb0_A 135 AWDGRLIALDA---ATGKEVWHQN 155 (677)
T ss_dssp CTTSEEEEEET---TTCCEEEEEE
T ss_pred cCCCEEEEEEC---CCCCEEeeec
Confidence 45677888877 3889999864
No 31
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=42.28 E-value=57 Score=28.42 Aligned_cols=74 Identities=11% Similarity=0.236 Sum_probs=43.6
Q ss_pred cEEEEcCCC-------CCCCCCCceEEEe-cCCCEEEecC-CCceEEeecCCCCC------------C-----cceEEEe
Q 037333 41 TVVWVANRI-------NPINDSSGLLVVN-ETGNLVLTSQ-NKSVVWSANLSKEV------------Q-----TPVVLQL 94 (158)
Q Consensus 41 ~vvW~an~~-------~p~~~~~~~l~l~-~dG~Lvl~d~-~g~~iWss~~~~~~------------~-----~~~~~~L 94 (158)
.++|..... .|+. ....+.+. .+|.|+-+|. .|+.+|+....... . ...+..-
T Consensus 45 ~~~W~~~~~~~~~~~~~P~v-~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 123 (668)
T 1kv9_A 45 GLAWYMDLDNTRGLEATPLF-HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVG 123 (668)
T ss_dssp EEEEEEECSCCSCCCCCCEE-ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEE
T ss_pred ceEEEEECCCCCCcccCCEE-ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEE
Confidence 467876532 2322 13344444 5688888885 78999998643210 0 0112133
Q ss_pred ccCCCEEEecCCCCCCCeEEEEeC
Q 037333 95 LDSGNLVLRGERDGGSETYLWQSF 118 (158)
Q Consensus 95 ~d~GNLVl~~~~~~~~~~~iWqSf 118 (158)
..+|.|+-.|. .+++++|+--
T Consensus 124 ~~dg~l~alD~---~tG~~~W~~~ 144 (668)
T 1kv9_A 124 TLDGRLIALDA---KTGKAIWSQQ 144 (668)
T ss_dssp CTTSEEEEEET---TTCCEEEEEE
T ss_pred cCCCEEEEEEC---CCCCEeeeec
Confidence 45778888876 3899999863
No 32
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=41.51 E-value=83 Score=27.51 Aligned_cols=74 Identities=12% Similarity=0.194 Sum_probs=43.6
Q ss_pred cEEEEcCCC-------CCCCCCCceEEEe-cCCCEEEecC-CCceEEeecCCCCC------------C-----cceEEEe
Q 037333 41 TVVWVANRI-------NPINDSSGLLVVN-ETGNLVLTSQ-NKSVVWSANLSKEV------------Q-----TPVVLQL 94 (158)
Q Consensus 41 ~vvW~an~~-------~p~~~~~~~l~l~-~dG~Lvl~d~-~g~~iWss~~~~~~------------~-----~~~~~~L 94 (158)
.++|..... .|+.. ...+.+. .+|.|+-+|. .|+.+|+....... . ...+..-
T Consensus 49 ~~~W~~~~~~~~~~~~~P~v~-~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~ 127 (689)
T 1yiq_A 49 GLAWSYKLDLDRGVEATPIVV-DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVG 127 (689)
T ss_dssp EEEEEEECSSCSCCCCCCEEE-TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEE
T ss_pred eEEEEEECCCCCCceecCEEE-CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEE
Confidence 567776532 23221 3445544 4688888886 78999998642110 0 0111133
Q ss_pred ccCCCEEEecCCCCCCCeEEEEeC
Q 037333 95 LDSGNLVLRGERDGGSETYLWQSF 118 (158)
Q Consensus 95 ~d~GNLVl~~~~~~~~~~~iWqSf 118 (158)
..+|.|+-.|. .+++++|+--
T Consensus 128 ~~dg~l~AlDa---~TG~~~W~~~ 148 (689)
T 1yiq_A 128 VLDGRLEAIDA---KTGQRAWSVD 148 (689)
T ss_dssp CTTSEEEEEET---TTCCEEEEEE
T ss_pred ccCCEEEEEEC---CCCCEeeeec
Confidence 45678888877 3889999853
No 33
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=41.40 E-value=94 Score=26.50 Aligned_cols=73 Identities=12% Similarity=0.297 Sum_probs=43.4
Q ss_pred cEEEEcCCC-------CCCCCCCceEEEec--CCCEEEecC--CCceEEeecCCCCC------------C-----cceEE
Q 037333 41 TVVWVANRI-------NPINDSSGLLVVNE--TGNLVLTSQ--NKSVVWSANLSKEV------------Q-----TPVVL 92 (158)
Q Consensus 41 ~vvW~an~~-------~p~~~~~~~l~l~~--dG~Lvl~d~--~g~~iWss~~~~~~------------~-----~~~~~ 92 (158)
.++|..... .|+.. ...+.+.. +|.|+-+|. .|+.+|+....... . ...+.
T Consensus 41 ~~~W~~~~~~~~g~~~~P~v~-~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 119 (571)
T 2ad6_A 41 KAAWSFSTGVLNGHEGAPLVI-GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIV 119 (571)
T ss_dssp EEEEEEECSCCSCCCSCCEEE-TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEE
T ss_pred cEEEEEECCCCCCcccccEEE-CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEE
Confidence 567875432 23321 34555554 578888885 78999998653210 0 01111
Q ss_pred EeccCCCEEEecCCCCCCCeEEEEe
Q 037333 93 QLLDSGNLVLRGERDGGSETYLWQS 117 (158)
Q Consensus 93 ~L~d~GNLVl~~~~~~~~~~~iWqS 117 (158)
.-..+|.|+-.|. .+++++|+-
T Consensus 120 v~~~dg~l~alD~---~tG~~~W~~ 141 (571)
T 2ad6_A 120 KKQANGHLLALDA---KTGKINWEV 141 (571)
T ss_dssp EECTTSEEEEEET---TTCCEEEEE
T ss_pred EEeCCCEEEEEEC---CCCCEEEEe
Confidence 3345677887776 388999974
No 34
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=40.47 E-value=96 Score=26.59 Aligned_cols=74 Identities=16% Similarity=0.225 Sum_probs=43.2
Q ss_pred CcEEEEcCCC---------CCCCCCCceEEEecC-CCEEEecC-CCceEEeecCCCCC----------C-----cceEEE
Q 037333 40 KTVVWVANRI---------NPINDSSGLLVVNET-GNLVLTSQ-NKSVVWSANLSKEV----------Q-----TPVVLQ 93 (158)
Q Consensus 40 ~~vvW~an~~---------~p~~~~~~~l~l~~d-G~Lvl~d~-~g~~iWss~~~~~~----------~-----~~~~~~ 93 (158)
..++|..... .|+. ....+.+... ++|+-+|. .|+.+|+....... . ...+..
T Consensus 44 ~~~~W~~~~~~~~~~g~~~~P~v-~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~ 122 (582)
T 1flg_A 44 LTPAWSYSFGDEKQRGQESQAIV-SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFF 122 (582)
T ss_dssp CEEEEEEECCTTCCSCCCCCCEE-ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEE
T ss_pred CcEEEEEECCCccCCcceeccEE-ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEE
Confidence 4667876543 2332 1345555554 56777776 68899998754211 0 011102
Q ss_pred eccCCCEEEecCCCCCCCeEEEEe
Q 037333 94 LLDSGNLVLRGERDGGSETYLWQS 117 (158)
Q Consensus 94 L~d~GNLVl~~~~~~~~~~~iWqS 117 (158)
-..+|.|+-.|. .+++++|+-
T Consensus 123 ~t~dg~l~AlD~---~TG~~~W~~ 143 (582)
T 1flg_A 123 GTLDASVVALNK---NTGKVVWKK 143 (582)
T ss_dssp EETTTEEEEEES---SSCCEEEEE
T ss_pred EeCCCEEEEEEC---CCCCEEeee
Confidence 235677777776 389999985
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=40.26 E-value=1.1e+02 Score=22.38 Aligned_cols=57 Identities=14% Similarity=0.361 Sum_probs=29.6
Q ss_pred eEEEecCCCEEEecCCC--c-eEEeecC--------CCCCCcceEEEeccCCCEEEecCCCCCCCeEEEEe
Q 037333 58 LLVVNETGNLVLTSQNK--S-VVWSANL--------SKEVQTPVVLQLLDSGNLVLRGERDGGSETYLWQS 117 (158)
Q Consensus 58 ~l~l~~dG~Lvl~d~~g--~-~iWss~~--------~~~~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqS 117 (158)
.+.+..+|+|++.+... . .+|.... ......+..+.+..+|+|++.+. +....||+-
T Consensus 211 ~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~---~~~v~v~~~ 278 (286)
T 1q7f_A 211 GVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASK---DYRLYIYRY 278 (286)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEET---TTEEEEEEC
T ss_pred EEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECC---CCeEEEEEc
Confidence 46677778777776432 2 3443221 01111122336677888888754 233457763
No 36
>1xkp_C Chaperone protein YSCB; YOPN, type III secretion, SYCN, membrane PR chaperon complex; HET: MLY; 1.70A {Yersinia pestis} SCOP: d.198.1.1
Probab=34.79 E-value=88 Score=22.45 Aligned_cols=17 Identities=47% Similarity=0.655 Sum_probs=13.5
Q ss_pred ceEEEeccCCCEEEecC
Q 037333 89 PVVLQLLDSGNLVLRGE 105 (158)
Q Consensus 89 ~~~~~L~d~GNLVl~~~ 105 (158)
+.+++|.|+|||+|...
T Consensus 80 p~aLtld~~~qLiLqar 96 (143)
T 1xkp_C 80 PQTLVLDDCGQLVLEAR 96 (143)
T ss_dssp CCEEEECTTSCEEEEEE
T ss_pred CceEEEcCcccchhhhh
Confidence 45559999999999754
No 37
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=34.39 E-value=1.7e+02 Score=24.90 Aligned_cols=59 Identities=17% Similarity=0.320 Sum_probs=35.4
Q ss_pred eEEEe-cCCCEEEecC-CCceEEeecCCC-----C-CC-----cceEEEecc------CCCEEEecCCCCCCCeEEEEeC
Q 037333 58 LLVVN-ETGNLVLTSQ-NKSVVWSANLSK-----E-VQ-----TPVVLQLLD------SGNLVLRGERDGGSETYLWQSF 118 (158)
Q Consensus 58 ~l~l~-~dG~Lvl~d~-~g~~iWss~~~~-----~-~~-----~~~~~~L~d------~GNLVl~~~~~~~~~~~iWqSf 118 (158)
.+.+. .||.|+..|. .|+++|+..... . .. ...+..-.. +|.++-+|. .+++.+|+-.
T Consensus 117 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~---~tG~~~W~~~ 193 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDL---KTGELKWRAF 193 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEET---TTCCEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEEC---CCCcEEEEEc
Confidence 44444 5788988886 789999876432 0 00 111101111 567777776 3889999864
Q ss_pred C
Q 037333 119 D 119 (158)
Q Consensus 119 d 119 (158)
-
T Consensus 194 ~ 194 (571)
T 2ad6_A 194 A 194 (571)
T ss_dssp S
T ss_pred c
Confidence 3
No 38
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=31.75 E-value=71 Score=25.24 Aligned_cols=51 Identities=22% Similarity=0.279 Sum_probs=27.8
Q ss_pred EecCCCEEEecC-CCceEEeecCCCCCC-------cceEEEe-ccCCCEEEecCCCCCCCeEEEE
Q 037333 61 VNETGNLVLTSQ-NKSVVWSANLSKEVQ-------TPVVLQL-LDSGNLVLRGERDGGSETYLWQ 116 (158)
Q Consensus 61 l~~dG~Lvl~d~-~g~~iWss~~~~~~~-------~~~~~~L-~d~GNLVl~~~~~~~~~~~iWq 116 (158)
-..||.|+..|. .|+.+|+... .... +... .. ..+|.|+..+. .+++.+|.
T Consensus 15 gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~-v~~s~dg~l~a~d~---~tG~~~w~ 74 (369)
T 2hz6_A 15 STLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAF-LPDPNDGSLYTLGS---KNNEGLTK 74 (369)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCE-EECTTTCCEEEC--------CCSEE
T ss_pred EcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEE-EEeCCCCEEEEEEC---CCCceeee
Confidence 345688888884 7889998765 2110 1111 22 36777777776 25667775
No 39
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=30.20 E-value=78 Score=25.60 Aligned_cols=76 Identities=8% Similarity=0.031 Sum_probs=43.5
Q ss_pred CCCcEEEEcCCC--CCCCC--------CCceEEE--ecCCCEEEecC-CCceEEeecCCCC-------------------
Q 037333 38 PVKTVVWVANRI--NPIND--------SSGLLVV--NETGNLVLTSQ-NKSVVWSANLSKE------------------- 85 (158)
Q Consensus 38 ~~~~vvW~an~~--~p~~~--------~~~~l~l--~~dG~Lvl~d~-~g~~iWss~~~~~------------------- 85 (158)
.....+|..... .|+.. ....+.+ ..||+|+.++. +|...|.......
T Consensus 28 ~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~ 107 (339)
T 2be1_A 28 RNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGK 107 (339)
T ss_dssp TTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC--------
T ss_pred CCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccc
Confidence 356788887764 23211 0133445 47999999885 4556776553210
Q ss_pred --CCcceEEEeccCCCEEEecCCCCCCCeEEEEe
Q 037333 86 --VQTPVVLQLLDSGNLVLRGERDGGSETYLWQS 117 (158)
Q Consensus 86 --~~~~~~~~L~d~GNLVl~~~~~~~~~~~iWqS 117 (158)
..+.+. .-..+|+|+-.+. .+++++|+=
T Consensus 108 ~~~~g~Vy-~Gs~~g~l~ald~---~tG~~~W~~ 137 (339)
T 2be1_A 108 IVEDEKVY-TGSMRTIMYTINM---LNGEIISAF 137 (339)
T ss_dssp --CCEEEE-ECEEEEEEEEEET---TTCCEEEEE
T ss_pred cccCCEEE-EEecCCEEEEEEC---CCCcEEEEE
Confidence 011111 3455667777766 488999974
No 40
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=28.74 E-value=1.6e+02 Score=23.75 Aligned_cols=56 Identities=16% Similarity=0.280 Sum_probs=36.0
Q ss_pred eEEEecCCCEEEecC-CCceEEeecCC--CCCCc---------ceEEEe--ccCCCEEEecCCCCCCCeEEEE
Q 037333 58 LLVVNETGNLVLTSQ-NKSVVWSANLS--KEVQT---------PVVLQL--LDSGNLVLRGERDGGSETYLWQ 116 (158)
Q Consensus 58 ~l~l~~dG~Lvl~d~-~g~~iWss~~~--~~~~~---------~~~~~L--~d~GNLVl~~~~~~~~~~~iWq 116 (158)
.+.-+.||.|.-.|. +|+.+|+.... ..... ...... ..+|+|+..+.. ++...|.
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~---~G~~~~~ 82 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAH---QGLQKLP 82 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETT---TEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECC---CCcEEee
Confidence 455567899988885 78999998764 11100 022134 478999988863 6666673
No 41
>1zla_K Latent nuclear antigen; latency associated nuclear antigen (LANA), kaposi'S sarcoma herpes virus (KSHV), nucleosome core particle, chromatin; 2.90A {Xenopus laevis}
Probab=23.85 E-value=27 Score=17.38 Aligned_cols=12 Identities=50% Similarity=0.750 Sum_probs=9.7
Q ss_pred CCcEeeccccCC
Q 037333 127 PGMKLGWDFKTG 138 (158)
Q Consensus 127 pgq~l~~~~~~g 138 (158)
|||+|..+..||
T Consensus 4 pgmrlrsgrstg 15 (26)
T 1zla_K 4 PGMRLRSGRSTG 15 (26)
T ss_pred CcceeecCcccC
Confidence 788888877777
No 42
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=23.18 E-value=2.2e+02 Score=24.79 Aligned_cols=66 Identities=11% Similarity=0.197 Sum_probs=39.5
Q ss_pred CCCcEEEEcCCCCCCCC-----CCc-eEEEecCCCEEEecC-CCceEEeecCCCCCCcceEEEeccCCCEEEec
Q 037333 38 PVKTVVWVANRINPIND-----SSG-LLVVNETGNLVLTSQ-NKSVVWSANLSKEVQTPVVLQLLDSGNLVLRG 104 (158)
Q Consensus 38 ~~~~vvW~an~~~p~~~-----~~~-~l~l~~dG~Lvl~d~-~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~ 104 (158)
....++|......|... .+. .+.-+.||.|..+|. .|+++|+..........-+ ....+|..++.-
T Consensus 463 ~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~-ty~~~G~qyv~~ 535 (689)
T 1yiq_A 463 VKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPV-TYSVDGEQYVTF 535 (689)
T ss_dssp TTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE-EEEETTEEEEEE
T ss_pred CCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCce-EEEECCEEEEEE
Confidence 45678998765444321 122 222345788988886 5889999987543322223 446788776653
No 43
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=21.05 E-value=2.6e+02 Score=23.78 Aligned_cols=66 Identities=15% Similarity=0.258 Sum_probs=37.7
Q ss_pred CCcEEEEcCCCCCCCC-----CCce-EEEecCCCEEEecC-CCceEEeecCCCCCCcceEEEeccCCCEEEecC
Q 037333 39 VKTVVWVANRINPIND-----SSGL-LVVNETGNLVLTSQ-NKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGE 105 (158)
Q Consensus 39 ~~~vvW~an~~~p~~~-----~~~~-l~l~~dG~Lvl~d~-~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~ 105 (158)
...++|......|... .+.. +.-+.||.|..+|. .|+++|+..........-+ ....+|.++|.-.
T Consensus 475 tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~-~y~~~G~qYv~~~ 547 (582)
T 1flg_A 475 SGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPI-TWEQDGEQYLGVT 547 (582)
T ss_dssp TCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE-EEEETTEEEEEEE
T ss_pred CCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCce-EEEECCEEEEEEE
Confidence 4577887654333321 1222 22334688888886 6889999887543322223 4456887776644
No 44
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=20.08 E-value=2.6e+02 Score=24.16 Aligned_cols=67 Identities=9% Similarity=0.081 Sum_probs=38.9
Q ss_pred CCCcEEEEcCCCCCCCC-----CCce-EEEecCCCEEEecC-CCceEEeecCCCCCCcceEEEeccCCCEEEecC
Q 037333 38 PVKTVVWVANRINPIND-----SSGL-LVVNETGNLVLTSQ-NKSVVWSANLSKEVQTPVVLQLLDSGNLVLRGE 105 (158)
Q Consensus 38 ~~~~vvW~an~~~p~~~-----~~~~-l~l~~dG~Lvl~d~-~g~~iWss~~~~~~~~~~~~~L~d~GNLVl~~~ 105 (158)
....++|......|... .+.. +.-+.||.|..+|. .|+++|+..........-+ ...-+|..+|.-.
T Consensus 461 ~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~-~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 461 ITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPM-TYTHKGTQYVAIY 534 (599)
T ss_dssp TTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE-EEEETTEEEEEEE
T ss_pred CCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccE-EEEeCCEEEEEEE
Confidence 35678998753333221 1222 33345788888886 6889999987543322223 4456887665533
Done!