Query 037334
Match_columns 263
No_of_seqs 180 out of 1402
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 19:04:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037334.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037334hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.2E-43 1.4E-47 322.4 21.2 234 5-251 11-251 (454)
2 2c1x_A UDP-glucose flavonoid 3 100.0 2.8E-33 9.4E-38 258.0 21.0 241 1-251 1-249 (456)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.6E-33 5.5E-38 261.3 18.7 238 1-250 1-260 (482)
4 2acv_A Triterpene UDP-glucosyl 100.0 1E-32 3.4E-37 254.8 20.1 232 5-251 7-250 (463)
5 2vch_A Hydroquinone glucosyltr 100.0 1.2E-30 4.2E-35 241.8 24.2 235 1-251 1-245 (480)
6 2iya_A OLEI, oleandomycin glyc 99.7 1.4E-17 4.6E-22 151.1 10.7 128 7-148 12-141 (424)
7 4amg_A Snogd; transferase, pol 99.6 2.1E-15 7.2E-20 135.1 6.8 134 5-148 20-160 (400)
8 1iir_A Glycosyltransferase GTF 99.5 8E-14 2.8E-18 126.1 12.4 122 8-147 1-127 (415)
9 2iyf_A OLED, oleandomycin glyc 99.5 2.6E-13 9E-18 122.9 10.9 134 1-148 1-136 (430)
10 3ia7_A CALG4; glycosysltransfe 99.4 6.6E-13 2.3E-17 118.6 10.5 125 8-146 5-133 (402)
11 3rsc_A CALG2; TDP, enediyne, s 99.4 2.7E-12 9.3E-17 115.5 11.0 126 7-147 20-150 (415)
12 1rrv_A Glycosyltransferase GTF 99.3 3.4E-12 1.2E-16 115.3 10.7 123 8-147 1-128 (416)
13 2p6p_A Glycosyl transferase; X 99.2 8.4E-11 2.9E-15 104.7 9.8 126 8-147 1-138 (384)
14 3oti_A CALG3; calicheamicin, T 99.1 5.8E-10 2E-14 99.9 12.5 125 7-146 20-160 (398)
15 2yjn_A ERYCIII, glycosyltransf 99.1 4.6E-10 1.6E-14 102.1 10.3 133 7-148 20-176 (441)
16 3h4t_A Glycosyltransferase GTF 99.1 7.8E-10 2.7E-14 99.6 11.3 124 8-148 1-127 (404)
17 3tsa_A SPNG, NDP-rhamnosyltran 99.0 9.3E-10 3.2E-14 98.1 9.2 131 7-147 1-145 (391)
18 4fzr_A SSFS6; structural genom 99.0 4.2E-10 1.4E-14 100.7 6.5 134 5-147 13-154 (398)
19 3otg_A CALG1; calicheamicin, T 98.8 1.5E-08 5E-13 90.7 10.3 131 5-147 18-161 (412)
20 3s2u_A UDP-N-acetylglucosamine 98.3 4.8E-06 1.6E-10 73.9 11.9 117 8-143 3-121 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 97.5 0.0012 4.2E-08 57.3 12.3 119 8-145 7-127 (364)
22 3c48_A Predicted glycosyltrans 94.1 0.45 1.5E-05 41.9 11.1 123 6-147 19-155 (438)
23 2r60_A Glycosyl transferase, g 93.8 0.35 1.2E-05 43.7 10.2 125 6-146 6-152 (499)
24 3fro_A GLGA glycogen synthase; 93.6 1.1 3.6E-05 39.2 12.7 40 6-46 1-45 (439)
25 2jjm_A Glycosyl transferase, g 92.6 1.2 4E-05 38.6 11.3 114 7-146 15-134 (394)
26 3okp_A GDP-mannose-dependent a 92.6 0.91 3.1E-05 39.0 10.5 110 6-146 3-118 (394)
27 1v4v_A UDP-N-acetylglucosamine 89.9 3.1 0.0001 35.7 11.1 113 8-144 6-122 (376)
28 2gek_A Phosphatidylinositol ma 89.3 1.2 4E-05 38.5 8.0 115 6-146 19-139 (406)
29 1vgv_A UDP-N-acetylglucosamine 84.6 5 0.00017 34.3 9.3 112 9-145 2-118 (384)
30 3s28_A Sucrose synthase 1; gly 78.8 7.4 0.00025 37.8 8.8 109 26-144 318-437 (816)
31 2wqk_A 5'-nucleotidase SURE; S 78.0 5.3 0.00018 33.0 6.6 99 24-146 17-128 (251)
32 3hbm_A UDP-sugar hydrolase; PS 74.2 6.3 0.00021 33.1 6.2 88 15-146 12-102 (282)
33 4hwg_A UDP-N-acetylglucosamine 73.2 5.7 0.00019 34.8 5.9 43 102-145 81-125 (385)
34 3beo_A UDP-N-acetylglucosamine 72.3 17 0.0006 30.6 8.8 115 7-145 8-127 (375)
35 2iw1_A Lipopolysaccharide core 67.7 4.5 0.00015 34.3 4.0 36 9-45 2-40 (374)
36 2iuy_A Avigt4, glycosyltransfe 66.3 7.2 0.00025 32.7 5.0 28 18-46 30-57 (342)
37 2x0d_A WSAF; GT4 family, trans 63.7 4.3 0.00015 35.8 3.1 41 5-46 44-89 (413)
38 2x6q_A Trehalose-synthase TRET 62.8 12 0.00041 32.3 5.9 41 6-47 39-81 (416)
39 3vue_A GBSS-I, granule-bound s 61.6 9.8 0.00033 34.9 5.2 44 1-45 1-52 (536)
40 2phj_A 5'-nucleotidase SURE; S 57.2 27 0.00093 28.7 6.6 26 24-51 17-42 (251)
41 3dzc_A UDP-N-acetylglucosamine 56.4 15 0.0005 32.1 5.2 41 103-144 99-142 (396)
42 1y80_A Predicted cobalamin bin 55.6 18 0.0006 28.6 5.2 47 6-53 87-133 (210)
43 2i2x_B MTAC, methyltransferase 54.5 19 0.00065 29.6 5.3 46 6-52 122-167 (258)
44 2yxb_A Coenzyme B12-dependent 51.4 18 0.0006 27.5 4.3 47 5-52 16-62 (161)
45 1ccw_A Protein (glutamate muta 51.1 25 0.00086 25.7 5.1 46 6-52 2-47 (137)
46 1psw_A ADP-heptose LPS heptosy 50.9 1E+02 0.0034 25.6 9.6 42 9-50 2-44 (348)
47 1id1_A Putative potassium chan 50.9 16 0.00056 26.8 4.1 33 7-45 3-35 (153)
48 1rzu_A Glycogen synthase 1; gl 50.6 17 0.00059 32.0 4.8 37 9-46 2-44 (485)
49 3vot_A L-amino acid ligase, BL 50.2 76 0.0026 27.6 9.0 35 105-140 65-101 (425)
50 3ezx_A MMCP 1, monomethylamine 48.4 25 0.00087 28.0 5.0 47 5-52 90-136 (215)
51 2q5c_A NTRC family transcripti 46.9 28 0.00097 27.2 5.0 41 104-149 132-172 (196)
52 3ot5_A UDP-N-acetylglucosamine 46.7 26 0.00091 30.6 5.3 41 103-144 102-145 (403)
53 2qzs_A Glycogen synthase; glyc 46.3 21 0.00073 31.5 4.7 37 9-46 2-44 (485)
54 3to5_A CHEY homolog; alpha(5)b 45.2 37 0.0013 24.7 5.1 33 116-148 57-98 (134)
55 2lpm_A Two-component response 44.6 24 0.00083 25.4 4.0 31 111-142 49-84 (123)
56 3zqu_A Probable aromatic acid 44.4 37 0.0012 27.1 5.3 43 6-50 3-45 (209)
57 2hy7_A Glucuronosyltransferase 44.4 16 0.00055 31.9 3.5 36 7-45 14-52 (406)
58 3gl9_A Response regulator; bet 43.6 50 0.0017 22.6 5.6 37 111-148 42-87 (122)
59 2r8r_A Sensor protein; KDPD, P 42.8 40 0.0014 27.2 5.4 41 5-46 4-44 (228)
60 1lss_A TRK system potassium up 42.1 31 0.0011 24.3 4.3 33 6-44 3-35 (140)
61 1mvl_A PPC decarboxylase athal 40.9 35 0.0012 27.2 4.7 39 7-48 19-57 (209)
62 3lyu_A Putative hydrogenase; t 39.5 24 0.00083 25.9 3.4 36 8-47 19-54 (142)
63 2pju_A Propionate catabolism o 39.5 26 0.00089 28.2 3.8 38 105-145 141-180 (225)
64 3t6k_A Response regulator rece 35.0 86 0.0029 21.8 5.8 37 111-148 44-89 (136)
65 3m6m_D Sensory/regulatory prot 34.0 61 0.0021 22.9 4.8 37 111-148 54-101 (143)
66 3f6p_A Transcriptional regulat 33.3 95 0.0032 20.9 5.7 38 111-149 42-85 (120)
67 2iya_A OLEI, oleandomycin glyc 32.3 20 0.00069 31.1 2.2 32 214-250 209-240 (424)
68 4g6h_A Rotenone-insensitive NA 30.9 23 0.00079 32.1 2.3 35 5-45 40-74 (502)
69 3lrx_A Putative hydrogenase; a 30.5 26 0.0009 26.2 2.3 37 8-48 24-60 (158)
70 3qjg_A Epidermin biosynthesis 29.7 68 0.0023 24.7 4.6 42 8-51 6-47 (175)
71 2vqe_B 30S ribosomal protein S 29.0 2.4E+02 0.0081 23.1 9.3 33 115-147 157-191 (256)
72 3mc3_A DSRE/DSRF-like family p 29.0 84 0.0029 22.7 4.8 38 8-46 16-56 (134)
73 3tov_A Glycosyl transferase fa 28.6 2.6E+02 0.0089 23.4 9.0 45 7-51 8-53 (349)
74 3pdi_B Nitrogenase MOFE cofact 28.1 53 0.0018 29.4 4.2 31 107-141 367-397 (458)
75 3bul_A Methionine synthase; tr 27.8 79 0.0027 29.3 5.3 47 6-53 97-143 (579)
76 1pq4_A Periplasmic binding pro 27.0 1.1E+02 0.0037 25.4 5.8 48 106-154 228-277 (291)
77 3cg0_A Response regulator rece 26.3 1.1E+02 0.0039 20.9 5.2 33 116-148 54-93 (140)
78 2qs7_A Uncharacterized protein 26.3 74 0.0025 23.4 4.1 37 10-47 11-47 (144)
79 3p0j_A Tyrosyl-tRNA synthetase 26.3 78 0.0027 30.0 5.1 42 5-46 380-425 (690)
80 3kkj_A Amine oxidase, flavin-c 25.6 37 0.0013 26.1 2.5 19 24-43 14-32 (336)
81 3p9x_A Phosphoribosylglycinami 25.2 72 0.0024 25.4 4.0 31 116-146 31-61 (211)
82 3c3m_A Response regulator rece 25.2 1.6E+02 0.0054 20.3 5.8 36 111-147 43-87 (138)
83 1l7b_A DNA ligase; BRCT, autos 24.9 66 0.0023 21.8 3.3 39 104-142 23-70 (92)
84 1dbw_A Transcriptional regulat 24.4 1.5E+02 0.0052 19.9 5.4 37 111-148 43-86 (126)
85 3gt7_A Sensor protein; structu 23.8 1.5E+02 0.0051 21.0 5.5 38 110-148 46-92 (154)
86 3qxc_A Dethiobiotin synthetase 23.6 1E+02 0.0034 24.9 4.8 34 9-43 22-57 (242)
87 4b4o_A Epimerase family protei 23.6 46 0.0016 27.2 2.7 27 16-45 7-33 (298)
88 3h1g_A Chemotaxis protein CHEY 23.5 1.8E+02 0.006 19.7 5.9 33 116-148 51-92 (129)
89 2ebu_A Replication factor C su 23.3 1.4E+02 0.0049 21.0 5.0 38 104-141 39-86 (112)
90 2g1u_A Hypothetical protein TM 23.1 70 0.0024 23.3 3.5 33 7-45 19-51 (155)
91 2rjn_A Response regulator rece 23.1 1.5E+02 0.0052 20.8 5.4 38 110-148 46-90 (154)
92 3lqk_A Dipicolinate synthase s 23.0 93 0.0032 24.4 4.3 38 8-47 8-46 (201)
93 2qzj_A Two-component response 22.8 1.8E+02 0.0061 20.0 5.6 33 116-148 48-86 (136)
94 2k6g_A Replication factor C su 22.2 1.4E+02 0.005 20.8 4.8 38 104-141 49-96 (109)
95 3mcu_A Dipicolinate synthase, 22.2 88 0.003 24.8 4.0 39 8-48 6-45 (207)
96 4hn9_A Iron complex transport 22.1 99 0.0034 25.9 4.6 40 106-147 108-147 (335)
97 2qxy_A Response regulator; reg 21.9 1.7E+02 0.0057 20.1 5.3 37 110-148 43-86 (142)
98 1mio_B Nitrogenase molybdenum 21.7 98 0.0033 27.5 4.7 32 107-142 377-408 (458)
99 3pdi_A Nitrogenase MOFE cofact 21.5 78 0.0027 28.5 4.0 35 106-144 392-426 (483)
100 1zgz_A Torcad operon transcrip 21.2 1.9E+02 0.0064 19.1 5.6 38 110-148 41-84 (122)
101 2d8m_A DNA-repair protein XRCC 21.1 1.6E+02 0.0054 20.9 5.0 39 104-142 38-85 (129)
102 2a9o_A Response regulator; ess 20.8 1.9E+02 0.0063 19.0 5.4 33 116-148 45-83 (120)
103 2etv_A Iron(III) ABC transport 20.5 1.2E+02 0.0041 25.5 4.9 39 105-145 87-126 (346)
104 1g5t_A COB(I)alamin adenosyltr 20.5 1.2E+02 0.0043 23.6 4.5 40 6-46 27-66 (196)
105 3fwz_A Inner membrane protein 20.3 54 0.0019 23.5 2.3 34 6-45 6-39 (140)
106 3rqi_A Response regulator prot 20.1 1.6E+02 0.0054 21.7 5.1 37 111-148 47-90 (184)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.2e-43 Score=322.45 Aligned_cols=234 Identities=18% Similarity=0.270 Sum_probs=182.7
Q ss_pred CCCCeEEEecCCCCCChHHHHHHHHHHHcCCC--ceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCC
Q 037334 5 SSDHHVVLFPFMSKGHIIPILNLAQLLLRRPR--VTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVE 82 (263)
Q Consensus 5 ~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G--~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~ 82 (263)
.++.|||++|||+|||+|||++|||+|+++ | ++|||++|+.++.++.+..... .++|+|+.+| +++|++.+
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~-g~~~~vT~~~t~~~~~~~~~~~~~~-~~~i~~~~ip-----dglp~~~~ 83 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATE-APKVTFSFFCTTTTNDTLFSRSNEF-LPNIKYYNVH-----DGLPKGYV 83 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHHH-CTTSEEEEEECHHHHHHSCSSSSCC-CTTEEEEECC-----CCCCTTCC
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHhC-CCCEEEEEEeCHHHHHhhhcccccC-CCCceEEecC-----CCCCCCcc
Confidence 357899999999999999999999999999 9 9999999987776654322111 2579999987 68888765
Q ss_pred CCCCCCCccchhHHHHHH-HhcHHHHHHHHhhC-CCCcEEEEcCcchhhHHHHHHhCCCeEEEecccHHHHHHHHHHhcc
Q 037334 83 STDKLPSMSLYVPFTRAT-KLMQPHFERALESL-PRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYAMSVSRSVGQN 160 (263)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~~ 160 (263)
...+ + ...+..+.++. ..+++.+++++++. .+++|||+|+|++|+.++|+++|||+++|||++|++++++++.+..
T Consensus 84 ~~~~-~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 84 SSGN-P-REPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CCSC-T-THHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccCC-h-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 5433 1 13344455554 45677777776553 4899999999999999999999999999999999999999887643
Q ss_pred ccccC--CCCCCCccc-CCCCCCCccccCCCCCCCCCCCCCCchHHHHHHHHHHcccccEEEEcchhhhhHHHHHHHhhc
Q 037334 161 RLLSG--VQSDDELLT-LPEFPWIKITKKDFDPPITDPEPKGPHFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNLV 237 (263)
Q Consensus 161 ~~~~~--~~~~~~~~~-vPg~p~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~ 237 (263)
....+ ....++.+. +||+|+ ++.+|||+++.. +..+.+.+++.+..+++.++++||+|||+|||++++++++..
T Consensus 162 ~~~~~~~~~~~~~~~~~iPg~p~--~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~ 238 (454)
T 3hbf_A 162 REKTGSKEVHDVKSIDVLPGFPE--LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK 238 (454)
T ss_dssp HHTCCHHHHTTSSCBCCSTTSCC--BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT
T ss_pred HhhcCCCccccccccccCCCCCC--cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc
Confidence 11100 011123444 999986 999999998874 335557888889999999999999999999999999999986
Q ss_pred CCCceEEeCccCCC
Q 037334 238 GKPKSWCVGPLCLA 251 (263)
Q Consensus 238 ~~~~v~~VGPl~~~ 251 (263)
. +++|+|||+++.
T Consensus 239 ~-~~v~~vGPl~~~ 251 (454)
T 3hbf_A 239 F-KLLLNVGPFNLT 251 (454)
T ss_dssp S-SCEEECCCHHHH
T ss_pred C-CCEEEECCcccc
Confidence 4 689999999753
No 2
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.8e-33 Score=258.04 Aligned_cols=241 Identities=20% Similarity=0.301 Sum_probs=163.5
Q ss_pred CCCCCCCCeEEEecCCCCCChHHHHHHHHHHHcC-CCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCC
Q 037334 1 MGSISSDHHVVLFPFMSKGHIIPILNLAQLLLRR-PRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPA 79 (263)
Q Consensus 1 m~~~~~~~hvv~vp~p~~GHi~P~l~Lak~La~~-~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~ 79 (263)
|....++.||+++|+|++||++||++|||+|++| +|+.|||++|+.+..++.+.......++|+++.++ +++|+
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~-----~glp~ 75 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS-----DGVPE 75 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECC-----CCCCT
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC-----CCCCC
Confidence 6665567899999999999999999999999998 24678999987655444332111001479999886 46776
Q ss_pred CCCCCCCCCCccchhHHHHHH-HhcHHHHHHHHhhC-CCCcEEEEcCcchhhHHHHHHhCCCeEEEecccHHHHHHHHHH
Q 037334 80 GVESTDKLPSMSLYVPFTRAT-KLMQPHFERALESL-PRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYAMSVSRSV 157 (263)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~ 157 (263)
+.+.... + ...+..+.... ..++..+++++++. .++||||+|.++.|+.++|+++|||++.||+++++.++.+++.
T Consensus 76 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 153 (456)
T 2c1x_A 76 GYVFAGR-P-QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYI 153 (456)
T ss_dssp TCCCCCC-T-THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTH
T ss_pred cccccCC-h-HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhh
Confidence 5432211 1 12333344443 34555666655432 4899999999999999999999999999999999888877654
Q ss_pred hcc---ccccCC-CCCCCcc-cCCCCCCCccccCCCCCCCCCCCCCCchHHHHHHHHHHcccccEEEEcchhhhhHHHHH
Q 037334 158 GQN---RLLSGV-QSDDELL-TLPEFPWIKITKKDFDPPITDPEPKGPHFELFIDQIVSTSNSYGMIVNSFYELEPLFAD 232 (263)
Q Consensus 158 ~~~---~~~~~~-~~~~~~~-~vPg~p~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~ 232 (263)
+.. ....+. ....+.+ .+||++. ++.+|+|..+........+.+++.+..+.+++++++|+|||+|||..+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~--~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 154 DEIREKIGVSGIQGREDELLNFIPGMSK--VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHHHHCSSCCTTCTTCBCTTSTTCTT--CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHHHhccCCcccccccccccccCCCCCc--ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 321 111000 1011222 4899986 88899998664332233345566666677789999999999999999999
Q ss_pred HHhhcCCCceEEeCccCCC
Q 037334 233 HCNLVGKPKSWCVGPLCLA 251 (263)
Q Consensus 233 ~l~~~~~~~v~~VGPl~~~ 251 (263)
+++... ++++.|||++..
T Consensus 232 ~~~~~~-~~~~~vGpl~~~ 249 (456)
T 2c1x_A 232 DLKSKL-KTYLNIGPFNLI 249 (456)
T ss_dssp HHHHHS-SCEEECCCHHHH
T ss_pred HHHhcC-CCEEEecCcccC
Confidence 999865 689999999753
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.6e-33 Score=261.30 Aligned_cols=238 Identities=21% Similarity=0.314 Sum_probs=165.9
Q ss_pred CCCC-CCCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhcc--CC-CCCceEEecCCCCCCCC
Q 037334 1 MGSI-SSDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSN--SS-TAACCIIDIPYPENVPE 76 (263)
Q Consensus 1 m~~~-~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~--~~-~~~i~~~~lp~~~~~~~ 76 (263)
||.. .++.||+++|+|++||+|||++|||+|++| ||+|||++|..+..++.+.... .. .++++|+.+| ++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~r-G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~ 74 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLR-GFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DG 74 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEEEHHHHHHHC------------CEEEEEEC-----CC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhC-CCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CC
Confidence 6665 456899999999999999999999999999 9999999999877665443111 00 1379999887 35
Q ss_pred CCCCCCCCCCCCCccchhHHHHHH-HhcHHHHHHHHhhC------CCCcEEEEcCcchhhHHHHHHhCCCeEEEecccHH
Q 037334 77 IPAGVESTDKLPSMSLYVPFTRAT-KLMQPHFERALESL------PRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNY 149 (263)
Q Consensus 77 ~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~------~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~ 149 (263)
+|+...+.. .. ..+..+.... ..+.+.++++++++ .++||||+|+++.|+.++|+++|||++.||+++++
T Consensus 75 lp~~~~~~~-~~--~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~ 151 (482)
T 2pq6_A 75 LTPMEGDGD-VS--QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSAC 151 (482)
T ss_dssp CC------------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHH
T ss_pred CCCcccccC-cc--hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHH
Confidence 665210011 11 1233444444 56778888887743 27999999999999999999999999999999998
Q ss_pred HHHHHHHHhc-----cccccCCC--CC---CCcc-cCCCCCCCccccCCCCCCCCCCCCCCchHHHHHHHHHHcccccEE
Q 037334 150 AMSVSRSVGQ-----NRLLSGVQ--SD---DELL-TLPEFPWIKITKKDFDPPITDPEPKGPHFELFIDQIVSTSNSYGM 218 (263)
Q Consensus 150 ~~~~~~~~~~-----~~~~~~~~--~~---~~~~-~vPg~p~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~v 218 (263)
.++.+++++. ..|..... .. +..+ .+||++. ++.+++|.++........+.+++.+..+..++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 229 (482)
T 2pq6_A 152 SLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN--FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTI 229 (482)
T ss_dssp HHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS--CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCE
T ss_pred HHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC--CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEE
Confidence 8877755442 12221000 00 1122 3788886 788899987754322344556666667778899999
Q ss_pred EEcchhhhhHHHHHHHhhcCCCceEEeCccCC
Q 037334 219 IVNSFYELEPLFADHCNLVGKPKSWCVGPLCL 250 (263)
Q Consensus 219 lvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~ 250 (263)
|+|||++||++++++++... +++++|||+++
T Consensus 230 l~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~ 260 (482)
T 2pq6_A 230 LLNTFNELESDVINALSSTI-PSIYPIGPLPS 260 (482)
T ss_dssp EESSCGGGGHHHHHHHHTTC-TTEEECCCHHH
T ss_pred EEcChHHHhHHHHHHHHHhC-CcEEEEcCCcc
Confidence 99999999999999999876 78999999975
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1e-32 Score=254.77 Aligned_cols=232 Identities=22% Similarity=0.334 Sum_probs=169.1
Q ss_pred CCCCeEEEecCCCCCChHHHHHHHHHHHcCC-CceEEEEeCCCCchh-hhhhhcc--CCCCCceEEecCCCCCCCCCCCC
Q 037334 5 SSDHHVVLFPFMSKGHIIPILNLAQLLLRRP-RVTVTVFTTPANRPF-TSKFLSN--SSTAACCIIDIPYPENVPEIPAG 80 (263)
Q Consensus 5 ~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~-G~~VT~~~t~~~~~~-~~~~~~~--~~~~~i~~~~lp~~~~~~~~p~~ 80 (263)
+++.||+++|+|++||++||++|||+|++++ ||+|||++|..+... +.+.+.+ ...++++|+.+|.. .+|+.
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~~ 82 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPPQ 82 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCCG
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCcc
Confidence 3568999999999999999999999999874 899999999976421 2221111 11157999988732 23321
Q ss_pred CCCCCCCCCccchhHHHHHHHhcHHHHHHHHhhC--CCCcEEEEcCcchhhHHHHHHhCCCeEEEecccHHHHHHHHHHh
Q 037334 81 VESTDKLPSMSLYVPFTRATKLMQPHFERALESL--PRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYAMSVSRSVG 158 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~ 158 (263)
+... ..... +......+.+.++++++++ .++||||+|.++.|+.++|+++|||+++||+++++.++++++++
T Consensus 83 -~~~~---~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 156 (463)
T 2acv_A 83 -ELLK---SPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLK 156 (463)
T ss_dssp -GGGG---SHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGG
T ss_pred -cccC---CccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHH
Confidence 1011 11111 4444566677888888762 38999999999999999999999999999999999999888876
Q ss_pred ccccccCCCCCCC---cccCCCC-CCCccccCCCCCCCCCCCCCCchHHHHHHHHHHcccccEEEEcchhhhhHHHHHHH
Q 037334 159 QNRLLSGVQSDDE---LLTLPEF-PWIKITKKDFDPPITDPEPKGPHFELFIDQIVSTSNSYGMIVNSFYELEPLFADHC 234 (263)
Q Consensus 159 ~~~~~~~~~~~~~---~~~vPg~-p~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l 234 (263)
.......-...++ ...+||+ ++ ++.+|+|..+.+. . ..++.+.+..+.+++++++++|||+|||+++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pg~~~~--~~~~~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l 231 (463)
T 2acv_A 157 NRQIEEVFDDSDRDHQLLNIPGISNQ--VPSNVLPDACFNK--D-GGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDAL 231 (463)
T ss_dssp GSCTTCCCCCSSGGGCEECCTTCSSC--EEGGGSCHHHHCT--T-THHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHH
T ss_pred hhcccCCCCCccccCceeECCCCCCC--CChHHCchhhcCC--c-hHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHH
Confidence 5421000000111 3468999 65 8888998655443 2 25667777788889999999999999999999999
Q ss_pred hhcC--CCceEEeCccCCC
Q 037334 235 NLVG--KPKSWCVGPLCLA 251 (263)
Q Consensus 235 ~~~~--~~~v~~VGPl~~~ 251 (263)
++.. .+++++|||+++.
T Consensus 232 ~~~~~p~~~v~~vGpl~~~ 250 (463)
T 2acv_A 232 YDHDEKIPPIYAVGPLLDL 250 (463)
T ss_dssp HHHCTTSCCEEECCCCCCS
T ss_pred HhccccCCcEEEeCCCccc
Confidence 8754 4689999999864
No 5
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.97 E-value=1.2e-30 Score=241.80 Aligned_cols=235 Identities=23% Similarity=0.333 Sum_probs=165.1
Q ss_pred CCCCCCCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCC--chhhhhhhccCCCCCceEEecCCCCCCCCCC
Q 037334 1 MGSISSDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPAN--RPFTSKFLSNSSTAACCIIDIPYPENVPEIP 78 (263)
Q Consensus 1 m~~~~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~--~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p 78 (263)
|+. +++.||+++|+|++||++||++||++|++|+||+|||+++..+ ...+.+.... ...+++|+.+|.. ..+
T Consensus 1 M~~-~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~-~~~~i~~~~l~~~----~~~ 74 (480)
T 2vch_A 1 MEE-SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDS-LPSSISSVFLPPV----DLT 74 (480)
T ss_dssp ------CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC--CCTTEEEEECCCC----CCT
T ss_pred CCC-CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccc-cCCCceEEEcCCC----CCC
Confidence 543 4568999999999999999999999999832999999999874 3333321111 0157999988742 122
Q ss_pred CCCCCCCCCCCccchhHHHHHHHhcHHHHHHHHhhC---CCC-cEEEEcCcchhhHHHHHHhCCCeEEEecccHHHHHHH
Q 037334 79 AGVESTDKLPSMSLYVPFTRATKLMQPHFERALESL---PRV-SFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYAMSVS 154 (263)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~-~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~ 154 (263)
+. . .. ......+......+.+.++++++++ .++ ||||+|+++.|+.++|+++|||+++||+++++.++++
T Consensus 75 ~~-~---~~--~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 148 (480)
T 2vch_A 75 DL-S---SS--TRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFF 148 (480)
T ss_dssp TS-C---TT--CCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHH
T ss_pred CC-C---Cc--hhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHH
Confidence 11 1 10 1223334444456677788887663 378 9999999999999999999999999999999998888
Q ss_pred HHHhcccc-ccCCCC-CCCcccCCCCCCCccccCCCCCCCCCCCCCCchHHHHHHHHHHcccccEEEEcchhhhhHHHHH
Q 037334 155 RSVGQNRL-LSGVQS-DDELLTLPEFPWIKITKKDFDPPITDPEPKGPHFELFIDQIVSTSNSYGMIVNSFYELEPLFAD 232 (263)
Q Consensus 155 ~~~~~~~~-~~~~~~-~~~~~~vPg~p~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~ 232 (263)
++++.... ...... ..+...+||+++ ++.+++|..+.+. ....++.+.+..+.+++++|+++|||+|||+.++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~Pg~~p--~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~ 224 (480)
T 2vch_A 149 LHLPKLDETVSCEFRELTEPLMLPGCVP--VAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIK 224 (480)
T ss_dssp HHHHHHHHHCCSCGGGCSSCBCCTTCCC--BCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHH
T ss_pred HHHHHHHhcCCCcccccCCcccCCCCCC--CChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHH
Confidence 87764211 100000 022356789886 8888999876543 22356666677788889999999999999999999
Q ss_pred HHhhcC--CCceEEeCccCCC
Q 037334 233 HCNLVG--KPKSWCVGPLCLA 251 (263)
Q Consensus 233 ~l~~~~--~~~v~~VGPl~~~ 251 (263)
++++.. .++++.|||++..
T Consensus 225 ~l~~~~~~~~~v~~vGpl~~~ 245 (480)
T 2vch_A 225 ALQEPGLDKPPVYPVGPLVNI 245 (480)
T ss_dssp HHHSCCTTCCCEEECCCCCCC
T ss_pred HHHhcccCCCcEEEEeccccc
Confidence 998621 2589999999764
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.72 E-value=1.4e-17 Score=151.12 Aligned_cols=128 Identities=20% Similarity=0.210 Sum_probs=93.1
Q ss_pred CCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCCCCCC
Q 037334 7 DHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVESTDK 86 (263)
Q Consensus 7 ~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~~~~~ 86 (263)
..||++++++++||++|++.||++|+++ ||+|||+++..+.+.+.+ .+++++.++. +++.+......
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~-Gh~V~~~~~~~~~~~~~~-------~g~~~~~~~~-----~~~~~~~~~~~ 78 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVAR-GHRVSYAITDEFAAQVKA-------AGATPVVYDS-----ILPKESNPEES 78 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHH-------HTCEEEECCC-----CSCCTTCTTCC
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHC-CCeEEEEeCHHHHHHHHh-------CCCEEEecCc-----cccccccchhh
Confidence 4699999999999999999999999999 999999999876554443 3678887762 34432211011
Q ss_pred CCC-c-cchhHHHHHHHhcHHHHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEecccH
Q 037334 87 LPS-M-SLYVPFTRATKLMQPHFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNN 148 (263)
Q Consensus 87 ~~~-~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a 148 (263)
.+. . ..+..+......+...+.+++++. ++||||+|.++.|+..+|+++|||++.+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 79 WPEDQESAMGLFLDEAVRVLPQLEDAYADD-RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHTTTS-CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence 110 0 112222333334556677777775 999999999999999999999999999998875
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.57 E-value=2.1e-15 Score=135.11 Aligned_cols=134 Identities=19% Similarity=0.164 Sum_probs=84.5
Q ss_pred CCCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCC--CCCCCCCC
Q 037334 5 SSDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENV--PEIPAGVE 82 (263)
Q Consensus 5 ~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~--~~~p~~~~ 82 (263)
.++++|+++|+|++||++|++.||++|+++ ||+|||++++....... .++.++.+...... ...+....
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~r-Gh~Vt~~t~~~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRAL-GHEVRYATGGDIRAVAE--------AGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECSSTHHHHT--------TTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHC-CCEEEEEeCcchhhHHh--------cCCeeEecCCchhHhhhccccccc
Confidence 456899999999999999999999999999 99999999986554322 24455544311000 00000000
Q ss_pred CCCCCCCc----cchhH-HHHHHHhcHHHHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEecccH
Q 037334 83 STDKLPSM----SLYVP-FTRATKLMQPHFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNN 148 (263)
Q Consensus 83 ~~~~~~~~----~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a 148 (263)
........ ..... +..........+.+++++. +|||||+|.+..|+..+|+++|||++.++....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~ 160 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW-RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPA 160 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHH-CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTT
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEECcchHHHHHHHHHcCCCceeeccccc
Confidence 00000000 01111 1111223334555666665 899999999999999999999999999877654
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.51 E-value=8e-14 Score=126.09 Aligned_cols=122 Identities=16% Similarity=0.179 Sum_probs=83.8
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCCCCCCC
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVESTDKL 87 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~~~~~~ 87 (263)
+||++++++++||++|++.||++|+++ ||+|||+++....+.+.+ .+++++.++.. ..+..+...+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~-Gh~V~~~~~~~~~~~v~~-------~g~~~~~i~~~-----~~~~~~~~~~- 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL-GADVRMCAPPDCAERLAE-------VGVPHVPVGPS-----ARAPIQRAKP- 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHH-------TTCCEEECCC------------CCSC-
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC-CCeEEEEcCHHHHHHHHH-------cCCeeeeCCCC-----HHHHhhcccc-
Confidence 489999999999999999999999999 999999999875443332 47888888632 1111111010
Q ss_pred CCccchhHHHHHHH-hcHHHHHHHHh-hCCCCcEEEEcC-cchh--hHHHHHHhCCCeEEEeccc
Q 037334 88 PSMSLYVPFTRATK-LMQPHFERALE-SLPRVSFMVSDG-FLWW--TLDSANKFGFPRFVFYGMN 147 (263)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~l~~~l~-~~~~~~~vI~D~-~~~~--~~~vA~~lgiP~v~f~~~~ 147 (263)
.....+..... .....++++.+ + .++||||+|. +..| +..+|+++|||++.+++++
T Consensus 67 ---~~~~~~~~~~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~ 127 (415)
T 1iir_A 67 ---LTAEDVRRFTTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP 127 (415)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence 11011111111 22344555553 3 3899999998 7788 9999999999999999876
No 9
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.45 E-value=2.6e-13 Score=122.86 Aligned_cols=134 Identities=16% Similarity=0.183 Sum_probs=89.0
Q ss_pred CCCCCCCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCC
Q 037334 1 MGSISSDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAG 80 (263)
Q Consensus 1 m~~~~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~ 80 (263)
|....+..||+++++++.||++|++.||++|+++ ||+||++++....+.+.+ .+++++.++. .++.+
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~-G~~V~~~~~~~~~~~~~~-------~g~~~~~~~~-----~~~~~ 67 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVAR-GHRVTYAIPPVFADKVAA-------TGPRPVLYHS-----TLPGP 67 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHHHHT-------TSCEEEECCC-----CSCCT
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHC-CCeEEEEeCHHHHHHHHh-------CCCEEEEcCC-----cCccc
Confidence 4443334699999999999999999999999999 999999998865433322 4688887752 22222
Q ss_pred CCCCCCCC-Cc-cchhHHHHHHHhcHHHHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEecccH
Q 037334 81 VESTDKLP-SM-SLYVPFTRATKLMQPHFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNN 148 (263)
Q Consensus 81 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a 148 (263)
.......+ .. ..+..+......+...+.+++++. ++||||+|.+..|+..+|+++|||++.+++...
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~ 136 (430)
T 2iyf_A 68 DADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD-IPDLVLHDITSYPARVLARRWGVPAVSLSPNLV 136 (430)
T ss_dssp TSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS-CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCC
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEECCccHHHHHHHHHcCCCEEEEecccc
Confidence 11100000 00 111112222234456677777775 999999999888999999999999999997653
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.41 E-value=6.6e-13 Score=118.62 Aligned_cols=125 Identities=18% Similarity=0.115 Sum_probs=86.2
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCCCCCCC
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVESTDKL 87 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~~~~~~ 87 (263)
.||+++++++.||++|++.||++|.++ ||+|||+++....+.+.. .+++++.++.. ++.........
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~~~~~~~~~-------~G~~~~~~~~~-----~~~~~~~~~~~ 71 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPLFADEVKA-------AGAEVVLYKSE-----FDTFHVPEVVK 71 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHH-------TTCEEEECCCG-----GGTSSSSSSSC
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCHHHHHHHHH-------cCCEEEecccc-----ccccccccccc
Confidence 499999999999999999999999999 999999998654444332 46888877632 12110000000
Q ss_pred CC--ccchhH-HHHHHHhcHHHHHHHHhhCCCCcEEEEc-CcchhhHHHHHHhCCCeEEEecc
Q 037334 88 PS--MSLYVP-FTRATKLMQPHFERALESLPRVSFMVSD-GFLWWTLDSANKFGFPRFVFYGM 146 (263)
Q Consensus 88 ~~--~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~vI~D-~~~~~~~~vA~~lgiP~v~f~~~ 146 (263)
.. ...+.. +......+...+.+++++. +||+||+| .+..|+..+|+++|||++.+++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~ 133 (402)
T 3ia7_A 72 QEDAETQLHLVYVRENVAILRAAEEALGDN-PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGG 133 (402)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCSEEEEESTTHHHHHHHHHHHTCCEEEEESS
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEECchHHHHHHHHHHhhCCCEEEEecc
Confidence 00 011111 2222233446677777775 99999999 88889999999999999998744
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.36 E-value=2.7e-12 Score=115.51 Aligned_cols=126 Identities=15% Similarity=0.052 Sum_probs=88.6
Q ss_pred CCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCC---C
Q 037334 7 DHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVE---S 83 (263)
Q Consensus 7 ~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~---~ 83 (263)
..||+++++++.||++|++.||++|.++ ||+|+|+++....+.+.+ .+++++.++.+ ++.... .
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~-Gh~V~v~~~~~~~~~~~~-------~G~~~~~~~~~-----~~~~~~~~~~ 86 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRR-GHRVSYVTAGGFAEPVRA-------AGATVVPYQSE-----IIDADAAEVF 86 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHHHHH-------TTCEEEECCCS-----TTTCCHHHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHC-CCEEEEEeCHHHHHHHHh-------cCCEEEecccc-----ccccccchhh
Confidence 4699999999999999999999999999 999999998765555442 46888877632 221100 0
Q ss_pred CCCCCCccchhH-HHHHHHhcHHHHHHHHhhCCCCcEEEEc-CcchhhHHHHHHhCCCeEEEeccc
Q 037334 84 TDKLPSMSLYVP-FTRATKLMQPHFERALESLPRVSFMVSD-GFLWWTLDSANKFGFPRFVFYGMN 147 (263)
Q Consensus 84 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~vI~D-~~~~~~~~vA~~lgiP~v~f~~~~ 147 (263)
....+ ...+.. +......+...+.+++++. +||+||+| .+..|+..+|+++|||++.+.+..
T Consensus 87 ~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~ 150 (415)
T 3rsc_A 87 GSDDL-GVRPHLMYLRENVSVLRATAEALDGD-VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAF 150 (415)
T ss_dssp HSSSS-CHHHHHHHHHHHHHHHHHHHHHHSSS-CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccccH-HHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEECchhhhHHHHHHHHhCCCEEEEEecc
Confidence 00000 111222 2322334446677777775 99999999 788889999999999999988443
No 12
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.35 E-value=3.4e-12 Score=115.30 Aligned_cols=123 Identities=16% Similarity=0.143 Sum_probs=80.7
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCCCCCCC
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVESTDKL 87 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~~~~~~ 87 (263)
+||++++++++||++|++.||++|+++ ||+|||+++....+.+.+ .+++++.++.. ........ .
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~-Gh~V~~~~~~~~~~~v~~-------~g~~~~~~~~~-----~~~~~~~~--~ 65 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL-GVQTRMCAPPAAEERLAE-------VGVPHVPVGLP-----QHMMLQEG--M 65 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHH-------HTCCEEECSCC-----GGGCCCTT--S
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHHHHHHHH-------cCCeeeecCCC-----HHHHHhhc--c
Confidence 489999999999999999999999999 999999999764444332 36888887632 11111000 0
Q ss_pred CCccchhHHHHHHH-hcHHHHHHHHh-hCCCCcEEEEcC-cchh--hHHHHHHhCCCeEEEeccc
Q 037334 88 PSMSLYVPFTRATK-LMQPHFERALE-SLPRVSFMVSDG-FLWW--TLDSANKFGFPRFVFYGMN 147 (263)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~l~~~l~-~~~~~~~vI~D~-~~~~--~~~vA~~lgiP~v~f~~~~ 147 (263)
.. .....+..... .....++.+.+ . .++||||+|. +..| +..+|+++|||++.+++++
T Consensus 66 ~~-~~~~~~~~~~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~ 128 (416)
T 1rrv_A 66 PP-PPPEEEQRLAAMTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP 128 (416)
T ss_dssp CC-CCHHHHHHHHHHHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred cc-chhHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 00 11001111111 11233333332 3 3899999997 4556 8899999999999998775
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.17 E-value=8.4e-11 Score=104.74 Aligned_cols=126 Identities=11% Similarity=0.037 Sum_probs=82.6
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCC-------CCCCC
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVP-------EIPAG 80 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~-------~~p~~ 80 (263)
+||++++.++.||++|++.||++|+++ ||+|||+++....+.+.. .+++++.++...... +.|..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA-GHQVVMAANQDMGPVVTG-------VGLPAVATTDLPIRHFITTDREGRPEA 72 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHH-------TTCCEEESCSSCHHHHHHBCTTSCBCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC-CCEEEEEeCHHHHHHHHh-------CCCEEEEeCCcchHHHHhhhcccCccc
Confidence 489999999999999999999999999 999999998754333322 367787775210000 01100
Q ss_pred CCCCCCCCCccchhHH----H-HHHHhcHHHHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEeccc
Q 037334 81 VESTDKLPSMSLYVPF----T-RATKLMQPHFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMN 147 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~~----~-~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 147 (263)
. . +.......+ . .........+.+++++. +||+||+|.+..|+..+|+++|||++.++...
T Consensus 73 ~---~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~ 138 (384)
T 2p6p_A 73 I---P--SDPVAQARFTGRWFARMAASSLPRMLDFSRAW-RPDLIVGGTMSYVAPLLALHLGVPHARQTWDA 138 (384)
T ss_dssp C---C--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred c---C--cchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-CCcEEEECcchhhHHHHHHhcCCCEEEeccCC
Confidence 0 0 000111111 1 11122334555666664 89999999988889999999999999887653
No 14
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.11 E-value=5.8e-10 Score=99.91 Aligned_cols=125 Identities=12% Similarity=0.088 Sum_probs=86.9
Q ss_pred CCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCC-----
Q 037334 7 DHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGV----- 81 (263)
Q Consensus 7 ~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~----- 81 (263)
.++|+++..++.||++|++.||+.|.++ ||+|+|+++ ...+.+.. .++.++.++... .+....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~-~~~~~~~~-------~G~~~~~~~~~~---~~~~~~~~~~~ 87 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTA-GHDVLIAVA-EHADRAAA-------AGLEVVDVAPDY---SAVKVFEQVAK 87 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEES-SCHHHHHT-------TTCEEEESSTTC---CHHHHHHHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHC-CCEEEEecc-chHHHHHh-------CCCeeEecCCcc---CHHHHhhhccc
Confidence 4799999999999999999999999999 999999998 54433332 468888776210 000000
Q ss_pred --C--------CCCCCCCccchhH-HHHHHHhcHHHHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEecc
Q 037334 82 --E--------STDKLPSMSLYVP-FTRATKLMQPHFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFYGM 146 (263)
Q Consensus 82 --~--------~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 146 (263)
. ... ........ +......+...+.+++++. +||+||+|....++..+|+++|||++.....
T Consensus 88 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 88 DNPRFAETVATRPA--IDLEEWGVQIAAVNRPLVDGTMALVDDY-RPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HCHHHHHTGGGSCC--CSGGGGHHHHHHHHGGGHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred CCccccccccCChh--hhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 0 000 00111222 2333345667788888886 9999999988888888999999999987654
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.07 E-value=4.6e-10 Score=102.08 Aligned_cols=133 Identities=13% Similarity=0.090 Sum_probs=83.6
Q ss_pred CCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCC-CC-
Q 037334 7 DHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVE-ST- 84 (263)
Q Consensus 7 ~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~-~~- 84 (263)
.+||++++.++.||++|++.||++|.++ ||+|||+++....+.+.. .+++++.++.....+++..... ..
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~-GheV~~~~~~~~~~~v~~-------~G~~~~~i~~~~~~~~~~~~~~~~~~ 91 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAA-GHEVRVVASPALTEDITA-------AGLTAVPVGTDVDLVDFMTHAGHDII 91 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHT-TCEEEEEECGGGHHHHHT-------TTCCEEECSCCCCHHHHHHHTTHHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHC-CCeEEEEeCchhHHHHHh-------CCCceeecCCccchHHHhhhhhcccc
Confidence 3689999999999999999999999999 999999998764433322 4788888763100000000000 00
Q ss_pred -----CCC----CCccchhHH---HHHH----H-----h-cHHHHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEE
Q 037334 85 -----DKL----PSMSLYVPF---TRAT----K-----L-MQPHFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFV 142 (263)
Q Consensus 85 -----~~~----~~~~~~~~~---~~~~----~-----~-~~~~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~ 142 (263)
.+. +....+..+ .... . . ....+.+++++. ++|+||+|.+..|+..+|+++|||++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~pDlVv~d~~~~~~~~aA~~lgiP~v~ 170 (441)
T 2yjn_A 92 DYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW-RPDLVIWEPLTFAAPIAAAVTGTPHAR 170 (441)
T ss_dssp HHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH-CCSEEEECTTCTHHHHHHHHHTCCEEE
T ss_pred cccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc-CCCEEEecCcchhHHHHHHHcCCCEEE
Confidence 000 000001111 1111 1 1 223444455554 899999999888899999999999999
Q ss_pred EecccH
Q 037334 143 FYGMNN 148 (263)
Q Consensus 143 f~~~~a 148 (263)
+.....
T Consensus 171 ~~~~~~ 176 (441)
T 2yjn_A 171 LLWGPD 176 (441)
T ss_dssp ECSSCC
T ss_pred EecCCC
Confidence 876543
No 16
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.06 E-value=7.8e-10 Score=99.60 Aligned_cols=124 Identities=15% Similarity=0.057 Sum_probs=80.2
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCCCCCCC
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVESTDKL 87 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~~~~~~ 87 (263)
++|+++..+..||++|++.||+.|.++ ||+|+|+++....+.+.+ .++.++.++... +.. .+. .....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~-Gh~V~v~~~~~~~~~v~~-------~g~~~~~l~~~~--~~~-~~~-~~~~~ 68 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL-GADARMCLPPDYVERCAE-------VGVPMVPVGRAV--RAG-ARE-PGELP 68 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT-TCCEEEEECGGGHHHHHH-------TTCCEEECSSCS--SGG-GSC-TTCCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC-CCeEEEEeCHHHHHHHHH-------cCCceeecCCCH--HHH-hcc-ccCCH
Confidence 478999999999999999999999999 999999998754444332 467888776321 101 000 00000
Q ss_pred CCccchhHHHHHHHhcHHHHHHHHhhCCCCcEEEEcCcchhh---HHHHHHhCCCeEEEecccH
Q 037334 88 PSMSLYVPFTRATKLMQPHFERALESLPRVSFMVSDGFLWWT---LDSANKFGFPRFVFYGMNN 148 (263)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~~~---~~vA~~lgiP~v~f~~~~a 148 (263)
......+..........+.+++ .++|+||+|....++ ..+|+++|||++..+.+..
T Consensus 69 --~~~~~~~~~~~~~~~~~l~~~~---~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 69 --PGAAEVVTEVVAEWFDKVPAAI---EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp --TTCGGGHHHHHHHHHHHHHHHH---TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred --HHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 1222223333333333444433 279999999665544 7889999999998777654
No 17
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.00 E-value=9.3e-10 Score=98.07 Aligned_cols=131 Identities=12% Similarity=0.084 Sum_probs=81.1
Q ss_pred CCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEec-CCCCCC-----CCCCCC
Q 037334 7 DHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDI-PYPENV-----PEIPAG 80 (263)
Q Consensus 7 ~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~l-p~~~~~-----~~~p~~ 80 (263)
+++|+++..++.||++|++.|++.|.++ ||+|+++++....+.+.. .+++++.+ +.+... +..+..
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~-GheV~v~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS-GHEVLIAAPPELQATAHG-------AGLTTAGIRGNDRTGDTGGTTQLRFP 72 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT-TCEEEEEECHHHHHHHHH-------BTCEEEEC--------------CCSC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC-CCEEEEecChhhHHHHHh-------CCCceeeecCCccchhhhhhhccccc
Confidence 3689999999999999999999999999 999999987543333322 35677766 311000 000000
Q ss_pred CCCCCCCCCccchhH-HHHHHHhc-------HHHHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEeccc
Q 037334 81 VESTDKLPSMSLYVP-FTRATKLM-------QPHFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMN 147 (263)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~~~~~~~-------~~~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 147 (263)
........ ...... +......+ ...+.+++++. +||+||+|.+..++..+|+++|||++.+....
T Consensus 73 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 73 NPAFGQRD-TEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW-RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp CGGGGCTT-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred cccccccc-chhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc-CCCEEEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 00000000 001111 11111233 45667777775 99999999877778888999999999886544
No 18
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.99 E-value=4.2e-10 Score=100.75 Aligned_cols=134 Identities=15% Similarity=0.133 Sum_probs=83.5
Q ss_pred CCCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCC--CC
Q 037334 5 SSDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAG--VE 82 (263)
Q Consensus 5 ~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~--~~ 82 (263)
...++|+++..++.||++|++.|++.|.++ ||+|+++++....+.+.. .++.++.++.......+... ..
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~-GheV~v~~~~~~~~~~~~-------~G~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAA-GHEVLVAASENMGPTVTG-------AGLPFAPTCPSLDMPEVLSWDREG 84 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEEEGGGHHHHHH-------TTCCEEEEESSCCHHHHHSBCTTS
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHC-CCEEEEEcCHHHHHHHHh-------CCCeeEecCCccchHhhhhhhccC
Confidence 346799999999999999999999999999 999999998654433332 35666666421000000000 00
Q ss_pred CCCCCCC-c-cchhH----HHHHHHhcHHHHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEeccc
Q 037334 83 STDKLPS-M-SLYVP----FTRATKLMQPHFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMN 147 (263)
Q Consensus 83 ~~~~~~~-~-~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 147 (263)
.....+. . ..... +......+...+.+++++. +||+||+|....++..+|+.+|||++.+....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~ 154 (398)
T 4fzr_A 85 NRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW-KPDLVLTETYSLTGPLVAATLGIPWIEQSIRL 154 (398)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECccccHHHHHHHhhCCCEEEeccCC
Confidence 0000000 0 00111 1111223345666677775 99999999877788889999999999877654
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.82 E-value=1.5e-08 Score=90.71 Aligned_cols=131 Identities=17% Similarity=0.090 Sum_probs=83.5
Q ss_pred CCCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCC------------C
Q 037334 5 SSDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYP------------E 72 (263)
Q Consensus 5 ~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~------------~ 72 (263)
..+++|+++..++.||++|++.||+.|.++ ||+|+++++....+.+.. .++.++.++.. .
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEGFAGTLRK-------LGFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGGGHHHHHH-------TTCEEEECCCCHHHHHHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHHHHHHHHh-------cCCceeecCcccccchhhhhhhhh
Confidence 346799999999999999999999999999 999999998743222221 36788777520 0
Q ss_pred CCCCCCCCCCCCCCCCCccchhHHHHH-HHhcHHHHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEeccc
Q 037334 73 NVPEIPAGVESTDKLPSMSLYVPFTRA-TKLMQPHFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMN 147 (263)
Q Consensus 73 ~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 147 (263)
.....+.. ....... .....+... ...+...+.+++++. +||+||+|....++..+|+++|||++......
T Consensus 90 ~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 90 DTDSPEGL-TPEQLSE--LPQIVFGRVIPQRVFDELQPVIERL-RPDLVVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp SCSCCTTC-CHHHHTT--SHHHHHHTHHHHHHHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred cccCCccC-ChhHhhH--HHHHHHhccchHHHHHHHHHHHHhc-CCCEEEECchhhHHHHHHHHcCCCEEEecccc
Confidence 00001100 0000000 111111111 122335666777775 99999999777777888999999998875543
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.32 E-value=4.8e-06 Score=73.85 Aligned_cols=117 Identities=17% Similarity=0.113 Sum_probs=67.6
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCCCCCCC
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVESTDKL 87 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~~~~~~ 87 (263)
.+|++..-.--||++|.+.||++|.++ ||+|+|+++....+ +.+-.. .++.++.++. .+++.. .....+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~~~g~e---~~~v~~--~g~~~~~i~~----~~~~~~-~~~~~~ 71 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGTPRGIE---NDLVPK--AGLPLHLIQV----SGLRGK-GLKSLV 71 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECSSSTH---HHHTGG--GTCCEEECC------------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEECCchHh---hchhhh--cCCcEEEEEC----CCcCCC-CHHHHH
Confidence 467765543349999999999999999 99999999865322 111011 3677887763 233221 000000
Q ss_pred CCccchhHHHHHHHhcHHHHHHHHhhCCCCcEEEEcCcch-h-hHHHHHHhCCCeEEE
Q 037334 88 PSMSLYVPFTRATKLMQPHFERALESLPRVSFMVSDGFLW-W-TLDSANKFGFPRFVF 143 (263)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~-~-~~~vA~~lgiP~v~f 143 (263)
.....+..+. ....+++++. +||+||++.... + +.-.|+.+|||.++.
T Consensus 72 ---~~~~~~~~~~----~~~~~~l~~~-~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 72 ---KAPLELLKSL----FQALRVIRQL-RPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp ----CHHHHHHHH----HHHHHHHHHH-CCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred ---HHHHHHHHHH----HHHHHHHHhc-CCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 1111222221 2234566665 999999996443 3 344578899999875
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.49 E-value=0.0012 Score=57.33 Aligned_cols=119 Identities=13% Similarity=0.060 Sum_probs=72.9
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCCCCCCC
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVESTDKL 87 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~~~~~~ 87 (263)
.+|+++....-||..+++.||+.|.++ ||+|++++....... ... .. .++.++.++.. .++.. .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~--~~~-~~--~g~~~~~~~~~----~~~~~----~-- 70 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRMEA--DLV-PK--HGIEIDFIRIS----GLRGK----G-- 70 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTSTHH--HHG-GG--GTCEEEECCCC----CCTTC----C--
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc-CCEEEEEecCCcchh--hhc-cc--cCCceEEecCC----ccCcC----c--
Confidence 689999876669999999999999999 999999988653211 111 11 36777776532 12110 0
Q ss_pred CCccchhHHHHHHHhcHHHHHHHHhhCCCCcEEEEcCcc--hhhHHHHHHhCCCeEEEec
Q 037334 88 PSMSLYVPFTRATKLMQPHFERALESLPRVSFMVSDGFL--WWTLDSANKFGFPRFVFYG 145 (263)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~--~~~~~vA~~lgiP~v~f~~ 145 (263)
. ...+....... .....+.+++++. ++|+|+++... .++..+|+.+|+|+++...
T Consensus 71 ~-~~~~~~~~~~~-~~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 71 I-KALIAAPLRIF-NAWRQARAIMKAY-KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp H-HHHHTCHHHHH-HHHHHHHHHHHHH-CCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred c-HHHHHHHHHHH-HHHHHHHHHHHhc-CCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 0 00000011111 1123455666664 89999998643 2345667888999986544
No 22
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=94.06 E-value=0.45 Score=41.91 Aligned_cols=123 Identities=14% Similarity=0.093 Sum_probs=67.3
Q ss_pred CCCeEEEecC---C--------CCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCC
Q 037334 6 SDHHVVLFPF---M--------SKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENV 74 (263)
Q Consensus 6 ~~~hvv~vp~---p--------~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~ 74 (263)
+.++|+++.. | .-|+-..+.+||+.|.++ ||+|++++.......-.. .... .+++++.++...
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~-~~~~--~~v~v~~~~~~~-- 92 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ-GIEVDIYTRATRPSQGEI-VRVA--ENLRVINIAAGP-- 92 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT-TCEEEEEEECCCGGGCSE-EEEE--TTEEEEEECCSC--
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhc-CCEEEEEecCCCCCCccc-cccc--CCeEEEEecCCC--
Confidence 4568999884 3 258889999999999999 999999987643211100 0001 467777765311
Q ss_pred CCCCCCCCCCCCCCCccchhHHHHHHHhcHHHHHHH-HhhCCCCcEEEEcCcch-h-hHHHHHHhCCCeEEEeccc
Q 037334 75 PEIPAGVESTDKLPSMSLYVPFTRATKLMQPHFERA-LESLPRVSFMVSDGFLW-W-TLDSANKFGFPRFVFYGMN 147 (263)
Q Consensus 75 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~vI~D~~~~-~-~~~vA~~lgiP~v~f~~~~ 147 (263)
. ... ........+. .+...+.+. ++...++|+|++..... + +..+++.+|+|.++..-..
T Consensus 93 --~-~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~ 155 (438)
T 3c48_A 93 --Y-EGL------SKEELPTQLA----AFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTL 155 (438)
T ss_dssp --S-SSC------CGGGGGGGHH----HHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred --c-ccc------chhHHHHHHH----HHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCC
Confidence 0 000 0001111111 111122222 43332499998765332 2 3446778899988655443
No 23
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=93.83 E-value=0.35 Score=43.67 Aligned_cols=125 Identities=12% Similarity=0.009 Sum_probs=68.5
Q ss_pred CCCeEEEecC---C------------CCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhh---hhccC-CCCCceEE
Q 037334 6 SDHHVVLFPF---M------------SKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSK---FLSNS-STAACCII 66 (263)
Q Consensus 6 ~~~hvv~vp~---p------------~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~---~~~~~-~~~~i~~~ 66 (263)
++++|+++.. | .-|.-.-+.+|++.|+++ ||+|++++.......... ..... ...+++++
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 84 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEM-GVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIV 84 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHT-TCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEE
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhc-CCeEEEEeCCCCcccccchhhhHHhccCCCCeEEE
Confidence 4578888874 2 257778899999999999 999999987543211010 01000 01478888
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCccchhHHHHHHHhcHHHHHHHHhhC-CCCcEEEEcCcc-hh-hHHHHHHhCCCeEEE
Q 037334 67 DIPYPENVPEIPAGVESTDKLPSMSLYVPFTRATKLMQPHFERALESL-PRVSFMVSDGFL-WW-TLDSANKFGFPRFVF 143 (263)
Q Consensus 67 ~lp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~vI~D~~~-~~-~~~vA~~lgiP~v~f 143 (263)
.++.. +...... ......+. .....+.+++++. .++|+|.+-... .+ +..+++.+|+|.++.
T Consensus 85 ~~~~~------~~~~~~~-----~~~~~~~~----~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~ 149 (499)
T 2r60_A 85 RIPFG------GDKFLPK-----EELWPYLH----EYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFT 149 (499)
T ss_dssp EECCS------CSSCCCG-----GGCGGGHH----HHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEE
T ss_pred EecCC------CcCCcCH-----HHHHHHHH----HHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEE
Confidence 77632 1100000 01111111 1122344555541 279988776432 22 344677889998765
Q ss_pred ecc
Q 037334 144 YGM 146 (263)
Q Consensus 144 ~~~ 146 (263)
.-.
T Consensus 150 ~H~ 152 (499)
T 2r60_A 150 GHS 152 (499)
T ss_dssp CSS
T ss_pred ccC
Confidence 443
No 24
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=93.60 E-value=1.1 Score=39.17 Aligned_cols=40 Identities=23% Similarity=0.257 Sum_probs=31.0
Q ss_pred CCCeEEEecC---C--CCCChHHHHHHHHHHHcCCCceEEEEeCCC
Q 037334 6 SDHHVVLFPF---M--SKGHIIPILNLAQLLLRRPRVTVTVFTTPA 46 (263)
Q Consensus 6 ~~~hvv~vp~---p--~~GHi~P~l~Lak~La~~~G~~VT~~~t~~ 46 (263)
++++|+++.. | .-|--.-+.+||+.|+++ ||+|+++++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~ 45 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASL-GHEVLVFTPSH 45 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHT-TCEEEEEEECT
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 3578888773 2 345556689999999999 99999999654
No 25
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=92.60 E-value=1.2 Score=38.60 Aligned_cols=114 Identities=8% Similarity=-0.025 Sum_probs=63.6
Q ss_pred CCeEEEecCCCC-CChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCCCCC
Q 037334 7 DHHVVLFPFMSK-GHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVESTD 85 (263)
Q Consensus 7 ~~hvv~vp~p~~-GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~~~~ 85 (263)
++.+....+|.. |.-.-..+||+.|+++ ||+|++++...... ... .. +++.++.++.+ .++. ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~-~~~---~~--~~i~~~~~~~~----~~~~----~~ 79 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAER-GHEIHFITSGLPFR-LNK---VY--PNIYFHEVTVN----QYSV----FQ 79 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHT-TCEEEEECSSCC-----C---CC--TTEEEECCCCC------------CC
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhC-CCEEEEEeCCCCCc-ccc---cC--CceEEEecccc----cccc----cc
Confidence 456777778764 6778888999999999 99999998754321 110 11 46777665432 1111 00
Q ss_pred CCCCccchhHHHHHHHhcHHHHHHHHhhCCCCcEEEEcCcch--hhHHHHHHh---CCCeEEEecc
Q 037334 86 KLPSMSLYVPFTRATKLMQPHFERALESLPRVSFMVSDGFLW--WTLDSANKF---GFPRFVFYGM 146 (263)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~--~~~~vA~~l---giP~v~f~~~ 146 (263)
. ... .. .....+.+++++. ++|+|++..... +...+++++ ++|.++..-.
T Consensus 80 ~----~~~--~~----~~~~~l~~~l~~~-~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 134 (394)
T 2jjm_A 80 Y----PPY--DL----ALASKMAEVAQRE-NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHG 134 (394)
T ss_dssp S----CCH--HH----HHHHHHHHHHHHH-TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCH
T ss_pred c----ccc--cH----HHHHHHHHHHHHc-CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEec
Confidence 0 001 11 1123355556664 899998864332 344455554 5898765443
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=92.56 E-value=0.91 Score=39.01 Aligned_cols=110 Identities=9% Similarity=0.075 Sum_probs=67.6
Q ss_pred CCCeEEEecC--C--CCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCC
Q 037334 6 SDHHVVLFPF--M--SKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGV 81 (263)
Q Consensus 6 ~~~hvv~vp~--p--~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~ 81 (263)
++++|+++.. + .-|+-.-+.+|++.| + ||+|++++........... ... .++.++.++.. .
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~-g~~v~v~~~~~~~~~~~~~-~~~--~~~~~~~~~~~-------~-- 67 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D-PESIVVFASTQNAEEAHAY-DKT--LDYEVIRWPRS-------V-- 67 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C-GGGEEEEEECSSHHHHHHH-HTT--CSSEEEEESSS-------S--
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--c-CCeEEEEECCCCccchhhh-ccc--cceEEEEcccc-------c--
Confidence 3467777753 3 468888999999999 7 9999999987654321111 111 45777766521 0
Q ss_pred CCCCCCCCccchhHHHHHHHhcHHHHHHHHhhCCCCcEEEEcCcc--hhhHHHHHHhCCCeEEEecc
Q 037334 82 ESTDKLPSMSLYVPFTRATKLMQPHFERALESLPRVSFMVSDGFL--WWTLDSANKFGFPRFVFYGM 146 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~--~~~~~vA~~lgiP~v~f~~~ 146 (263)
..+ .. .....+.+++++. ++|+|++.... .+....++++|+|.+++..-
T Consensus 68 ----~~~---~~--------~~~~~l~~~~~~~-~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h 118 (394)
T 3okp_A 68 ----MLP---TP--------TTAHAMAEIIRER-EIDNVWFGAAAPLALMAGTAKQAGASKVIASTH 118 (394)
T ss_dssp ----CCS---CH--------HHHHHHHHHHHHT-TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECC
T ss_pred ----ccc---ch--------hhHHHHHHHHHhc-CCCEEEECCcchHHHHHHHHHhcCCCcEEEEec
Confidence 001 01 1223466667775 89999875433 35677789999996554433
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=89.86 E-value=3.1 Score=35.65 Aligned_cols=113 Identities=18% Similarity=0.077 Sum_probs=58.1
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceE-EecCCCCCCCCCCCCCCCCCC
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCI-IDIPYPENVPEIPAGVESTDK 86 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~-~~lp~~~~~~~~p~~~~~~~~ 86 (263)
.+|+++.-- .+....+..|++.|.+++||+|.++.+............ . -++.+ ..++. .. . .
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-------~~--~---~ 69 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-L--FGIQEDRNLDV-------MQ--E---R 69 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-T--TTCCCSEECCC-------CS--S---C
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH-H--cCCCccccccc-------CC--C---C
Confidence 577777632 222344567888888753699888776543322221111 1 12222 12221 00 0 0
Q ss_pred CCCccchhHHHHHHHhcHHHHHHHHhhCCCCcEEEE--cCcchhh-HHHHHHhCCCeEEEe
Q 037334 87 LPSMSLYVPFTRATKLMQPHFERALESLPRVSFMVS--DGFLWWT-LDSANKFGFPRFVFY 144 (263)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~--D~~~~~~-~~vA~~lgiP~v~f~ 144 (263)
. .....+. .....+.+++++. +||+|++ +....|. ..+|+.+|||.+...
T Consensus 70 -~--~~~~~~~----~~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 122 (376)
T 1v4v_A 70 -Q--ALPDLAA----RILPQAARALKEM-GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE 122 (376)
T ss_dssp -C--CHHHHHH----HHHHHHHHHHHHT-TCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred -c--cHHHHHH----HHHHHHHHHHHHc-CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence 0 1111111 1224466677775 9999988 4344454 556788999987654
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=89.32 E-value=1.2 Score=38.54 Aligned_cols=115 Identities=13% Similarity=0.091 Sum_probs=61.6
Q ss_pred CCCeEEEecC---CC-CCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCC
Q 037334 6 SDHHVVLFPF---MS-KGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGV 81 (263)
Q Consensus 6 ~~~hvv~vp~---p~-~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~ 81 (263)
+.++|+++.. +. -|+-.-+.+|++.|.++ ||+|++++............ .. .+ +++.++.. .
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~-~~--~~-~~~~~~~~-------~-- 84 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYV-VS--GG-KAVPIPYN-------G-- 84 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTE-EE--CC-CCC---------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCccccCCccc-cc--CC-cEEecccc-------C--
Confidence 4567888763 22 46668899999999999 99999998875432111100 00 01 22222110 0
Q ss_pred CCCCCCCCccchhHHHHHHHhcHHHHHHHHhhCCCCcEEEEcCcch--hhHHHHHHhCCCeEEEecc
Q 037334 82 ESTDKLPSMSLYVPFTRATKLMQPHFERALESLPRVSFMVSDGFLW--WTLDSANKFGFPRFVFYGM 146 (263)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~--~~~~vA~~lgiP~v~f~~~ 146 (263)
..... ... ......+.+++++. ++|+|++..... ++..+++.+|+|.++..-.
T Consensus 85 -~~~~~---~~~-------~~~~~~l~~~l~~~-~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 139 (406)
T 2gek_A 85 -SVARL---RFG-------PATHRKVKKWIAEG-DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHT 139 (406)
T ss_dssp ----------CC-------HHHHHHHHHHHHHH-CCSEEEEECCCSSSHHHHHHHHEESSEEEEECC
T ss_pred -Ccccc---ccc-------HHHHHHHHHHHHhc-CCCEEEECCccchHHHHHHHHhcCCCEEEEEcC
Confidence 00000 000 01123455666664 899998776543 3455667779998876544
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=84.62 E-value=5 Score=34.29 Aligned_cols=112 Identities=12% Similarity=0.003 Sum_probs=58.5
Q ss_pred eEEEecCCCCCChHHHHHHHHHHHcCCC-ceEEEEeCCCCchhhhhhhccCCCCCceE-EecCCCCCCCCCCCCCCCCCC
Q 037334 9 HVVLFPFMSKGHIIPILNLAQLLLRRPR-VTVTVFTTPANRPFTSKFLSNSSTAACCI-IDIPYPENVPEIPAGVESTDK 86 (263)
Q Consensus 9 hvv~vp~p~~GHi~P~l~Lak~La~~~G-~~VT~~~t~~~~~~~~~~~~~~~~~~i~~-~~lp~~~~~~~~p~~~~~~~~ 86 (263)
+|+++... .++...+..|++.|.++ | +.+.++.+............. -++.+ ..++. ... .
T Consensus 2 kIl~v~~~-~~~~~~~~~l~~~L~~~-g~~~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~-------~~~----~- 64 (384)
T 1vgv_A 2 KVLTVFGT-RPEAIKMAPLVHALAKD-PFFEAKVCVTAQHREMLDQVLKL---FSIVPDYDLNI-------MQP----G- 64 (384)
T ss_dssp EEEEEECS-HHHHHHHHHHHHHHHHS-TTCEEEEEECCSSGGGGHHHHHH---HTCCCSEECCC-------CST----T-
T ss_pred eEEEEecc-cHHHHHHHHHHHHHHhC-CCCceEEEEcCCCHHHHHHHHHH---cCCCCCcceec-------CCC----C-
Confidence 56666432 46677788999999999 8 488776554322211111110 12222 22221 000 0
Q ss_pred CCCccchhHHHHHHHhcHHHHHHHHhhCCCCcEEEEc--Ccchhh-HHHHHHhCCCeEEEec
Q 037334 87 LPSMSLYVPFTRATKLMQPHFERALESLPRVSFMVSD--GFLWWT-LDSANKFGFPRFVFYG 145 (263)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~D--~~~~~~-~~vA~~lgiP~v~f~~ 145 (263)
. ....... .....+.+++++. +||+|++- ....|. .-+|+.+|+|.+....
T Consensus 65 -~--~~~~~~~----~~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 118 (384)
T 1vgv_A 65 -Q--GLTEITC----RILEGLKPILAEF-KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA 118 (384)
T ss_dssp -S--CHHHHHH----HHHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred -c--cHHHHHH----HHHHHHHHHHHHh-CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 0 1111111 1234466677775 89999873 244454 4456778999876544
No 30
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=78.77 E-value=7.4 Score=37.85 Aligned_cols=109 Identities=11% Similarity=0.122 Sum_probs=53.4
Q ss_pred HHHHHHHcCCCceEE----EEeCCCCchhhhhh---hcc-CCCCCceEEecCCCCCCCCCCCCCCCCCCCCCccchhHHH
Q 037334 26 NLAQLLLRRPRVTVT----VFTTPANRPFTSKF---LSN-SSTAACCIIDIPYPENVPEIPAGVESTDKLPSMSLYVPFT 97 (263)
Q Consensus 26 ~Lak~La~~~G~~VT----~~~t~~~~~~~~~~---~~~-~~~~~i~~~~lp~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 97 (263)
+||++|+.+ ||.|| ++|-......-... ... ....+++++.+|+... +++-...-... ..+..+.
T Consensus 318 ela~~L~~~-G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~-~g~l~~~l~k~-----~L~~~L~ 390 (816)
T 3s28_A 318 EMLQRIKQQ-GLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTE-KGIVRKWISRF-----EVWPYLE 390 (816)
T ss_dssp HHHHHHHHT-TCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEET-TEEECSCCCTT-----TCGGGHH
T ss_pred HHHHHHHHC-CCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCc-cccccccccHH-----HHHHHHH
Confidence 588888999 99887 77654322110000 001 1114788888875310 11000011111 1222111
Q ss_pred HHHHhcHHHHHHHHhhC-CCCcEEEEcCcc-hh-hHHHHHHhCCCeEEEe
Q 037334 98 RATKLMQPHFERALESL-PRVSFMVSDGFL-WW-TLDSANKFGFPRFVFY 144 (263)
Q Consensus 98 ~~~~~~~~~l~~~l~~~-~~~~~vI~D~~~-~~-~~~vA~~lgiP~v~f~ 144 (263)
.. ....+..+++.. .+||+|.+-... ++ +..+|+++|+|.+.-.
T Consensus 391 ~F---~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~ 437 (816)
T 3s28_A 391 TY---TEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIA 437 (816)
T ss_dssp HH---HHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HH---HHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEE
Confidence 11 113344444443 379999775422 23 4567888999987643
No 31
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=78.05 E-value=5.3 Score=33.03 Aligned_cols=99 Identities=18% Similarity=0.153 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCCCCCCCCCccchhHHHHHHHhc
Q 037334 24 ILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVESTDKLPSMSLYVPFTRATKLM 103 (263)
Q Consensus 24 ~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (263)
+..|++.|.+. | +|+++.+..+.+-....+.-. ..+++..+.. ... . ..++-| . ...
T Consensus 17 i~~L~~~l~~~-g-~V~VvAP~~~~Sg~g~siT~~--~pl~~~~~~~----~~~---~-~v~GTP------a-----DCV 73 (251)
T 2wqk_A 17 INALREALKSL-G-RVVVVAPDRNLSGVGHSLTFT--EPLKMRKIDT----DFY---T-VIDGTP------A-----DCV 73 (251)
T ss_dssp HHHHHHHHTTT-S-EEEEEEESSCCTTSCCSCCCS--SCEEEEEEET----TEE---E-ETTCCH------H-----HHH
T ss_pred HHHHHHHHHhC-C-CEEEEeeCCCCcccccCcCCC--CCceeEEeec----cce---e-ecCCCh------H-----HHH
Confidence 45688888888 8 699988876654433222101 1244433321 000 0 001111 0 011
Q ss_pred HHHHHHHHhhCCCCcEEEE----------cCcchhhHHH---HHHhCCCeEEEecc
Q 037334 104 QPHFERALESLPRVSFMVS----------DGFLWWTLDS---ANKFGFPRFVFYGM 146 (263)
Q Consensus 104 ~~~l~~~l~~~~~~~~vI~----------D~~~~~~~~v---A~~lgiP~v~f~~~ 146 (263)
.-.+..++.+. +||+||+ |.+.+.+... |.-+|||.+.|+-.
T Consensus 74 ~lal~~~l~~~-~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 74 HLGYRVILEEK-KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp HHHHHTTTTTC-CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hhhhhhhcCCC-CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 12233444443 8999999 5555555444 45579999998853
No 32
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=74.23 E-value=6.3 Score=33.10 Aligned_cols=88 Identities=14% Similarity=0.119 Sum_probs=51.9
Q ss_pred CCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhhhhccCCCCCceEEecCCCCCCCCCCCCCCCCCCCCCccchh
Q 037334 15 FMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSKFLSNSSTAACCIIDIPYPENVPEIPAGVESTDKLPSMSLYV 94 (263)
Q Consensus 15 ~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~p~~~~~~~~~~~~~~~~ 94 (263)
--|.||+.=.+.||++|. +|+|++.......+.. -++....++ . . + .
T Consensus 12 ~IG~GHvmRcl~LA~~l~-----~v~F~~~~~~~~~~~~-------~g~~v~~l~---------~-----~-----d-~- 58 (282)
T 3hbm_A 12 QIGFGHIKRDLVLAKQYS-----DVSFACLPLEGSLIDE-------IPYPVYELS---------S-----E-----S-I- 58 (282)
T ss_dssp TTBSHHHHHHHHHHTTCS-----SEEEEECCCTTCCGGG-------CCSCEEECS---------S-----S-----C-H-
T ss_pred CccccHHHHHHHHHHHHH-----hCEEEEecCcHhHHHH-------CCCeEEEcC---------c-----c-----C-H-
Confidence 347899999999999987 5888876532211111 123333221 1 0 0 1
Q ss_pred HHHHHHHhcHHHHHHHHhhCCCCcEEEEcCcch---hhHHHHHHhCCCeEEEecc
Q 037334 95 PFTRATKLMQPHFERALESLPRVSFMVSDGFLW---WTLDSANKFGFPRFVFYGM 146 (263)
Q Consensus 95 ~~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~~~---~~~~vA~~lgiP~v~f~~~ 146 (263)
..+.+++++. ++|+||.|.+.. |-..+.+..|++.+++--.
T Consensus 59 ----------~~~~~~l~~~-~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~ 102 (282)
T 3hbm_A 59 ----------YELINLIKEE-KFELLIIDHYGISVDDEKLIKLETGVKILSFDDE 102 (282)
T ss_dssp ----------HHHHHHHHHH-TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSS
T ss_pred ----------HHHHHHHHhC-CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecC
Confidence 1234445554 899999998753 4444555568888776554
No 33
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=73.15 E-value=5.7 Score=34.82 Aligned_cols=43 Identities=16% Similarity=0.143 Sum_probs=31.3
Q ss_pred hcHHHHHHHHhhCCCCcEEEE--cCcchhhHHHHHHhCCCeEEEec
Q 037334 102 LMQPHFERALESLPRVSFMVS--DGFLWWTLDSANKFGFPRFVFYG 145 (263)
Q Consensus 102 ~~~~~l~~~l~~~~~~~~vI~--D~~~~~~~~vA~~lgiP~v~f~~ 145 (263)
.+...+++++++. +||+||. |....|+...|+++|||.+.+..
T Consensus 81 ~~~~~l~~~l~~~-kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea 125 (385)
T 4hwg_A 81 LVIEKVDEVLEKE-KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA 125 (385)
T ss_dssp HHHHHHHHHHHHH-CCSEEEEESCSGGGGGHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHHHhc-CCcEEEEECCchHHHHHHHHHHhCCCEEEEeC
Confidence 3446677777776 9998765 55666777788999999876653
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=72.28 E-value=17 Score=30.58 Aligned_cols=115 Identities=14% Similarity=0.056 Sum_probs=60.0
Q ss_pred CCeEEEecCCCCCChHHHHHHHHHHHcCCC-ceEEEEeCCCCchhhhhhhccCCCCCceE-EecCCCCCCCCCCCCCCCC
Q 037334 7 DHHVVLFPFMSKGHIIPILNLAQLLLRRPR-VTVTVFTTPANRPFTSKFLSNSSTAACCI-IDIPYPENVPEIPAGVEST 84 (263)
Q Consensus 7 ~~hvv~vp~p~~GHi~P~l~Lak~La~~~G-~~VT~~~t~~~~~~~~~~~~~~~~~~i~~-~~lp~~~~~~~~p~~~~~~ 84 (263)
+++|+++. ...++......+++.|.+++| ++|+++++.............. ++.. ..++. ..+ +
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~-~---- 73 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIF---GITPDFDLNI-----MKD-R---- 73 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHH---TCCCSEECCC-----CCT-T----
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHc---CCCCcccccc-----CCC-c----
Confidence 46788885 335677788899999987623 8888777764332221111000 1211 11111 000 0
Q ss_pred CCCCCccchhHHHHHHHhcHHHHHHHHhhCCCCcEEEEcCc--chh-hHHHHHHhCCCeEEEec
Q 037334 85 DKLPSMSLYVPFTRATKLMQPHFERALESLPRVSFMVSDGF--LWW-TLDSANKFGFPRFVFYG 145 (263)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vI~D~~--~~~-~~~vA~~lgiP~v~f~~ 145 (263)
........ .....+.+++++. +||+|++... ..+ +...|+..|+|.+....
T Consensus 74 -----~~~~~~~~----~~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~ 127 (375)
T 3beo_A 74 -----QTLIDITT----RGLEGLDKVMKEA-KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEA 127 (375)
T ss_dssp -----CCHHHHHH----HHHHHHHHHHHHH-CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESC
T ss_pred -----ccHHHHHH----HHHHHHHHHHHHh-CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 01111111 1223456666665 8999988432 222 23567888999986543
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=67.67 E-value=4.5 Score=34.27 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=28.8
Q ss_pred eEEEec---CCCCCChHHHHHHHHHHHcCCCceEEEEeCC
Q 037334 9 HVVLFP---FMSKGHIIPILNLAQLLLRRPRVTVTVFTTP 45 (263)
Q Consensus 9 hvv~vp---~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~ 45 (263)
+|+++. .|.-|.-.-+.+|++.|+++ ||+|++++..
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~ 40 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAAR-GHHVRVYTQS 40 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHT-TCCEEEEESE
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhC-CCeEEEEecC
Confidence 455552 24567888899999999999 9999999875
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=66.31 E-value=7.2 Score=32.74 Aligned_cols=28 Identities=25% Similarity=0.228 Sum_probs=24.6
Q ss_pred CCChHHHHHHHHHHHcCCCceEEEEeCCC
Q 037334 18 KGHIIPILNLAQLLLRRPRVTVTVFTTPA 46 (263)
Q Consensus 18 ~GHi~P~l~Lak~La~~~G~~VT~~~t~~ 46 (263)
-|.-.-..+|++.|.++ ||+|++++...
T Consensus 30 gG~~~~~~~l~~~L~~~-G~~v~v~~~~~ 57 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLEL-GHEVFLLGAPG 57 (342)
T ss_dssp CHHHHHHHHHHHHHHHT-TCEEEEESCTT
T ss_pred ChHHHHHHHHHHHHHHc-CCeEEEEecCC
Confidence 56778899999999999 99999998764
No 37
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=63.66 E-value=4.3 Score=35.84 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=30.0
Q ss_pred CCCCeEEEecCCC-C----CChHHHHHHHHHHHcCCCceEEEEeCCC
Q 037334 5 SSDHHVVLFPFMS-K----GHIIPILNLAQLLLRRPRVTVTVFTTPA 46 (263)
Q Consensus 5 ~~~~hvv~vp~p~-~----GHi~P~l~Lak~La~~~G~~VT~~~t~~ 46 (263)
.++++|+++.... . |=.+-+.+||+.|+.+ ||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~-GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNK-KFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTT-TCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHc-CCceEEEEecC
Confidence 3456777665332 2 3335689999999999 99999999864
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=62.81 E-value=12 Score=32.29 Aligned_cols=41 Identities=15% Similarity=0.073 Sum_probs=32.2
Q ss_pred CCCeEEEecC-C-CCCChHHHHHHHHHHHcCCCceEEEEeCCCC
Q 037334 6 SDHHVVLFPF-M-SKGHIIPILNLAQLLLRRPRVTVTVFTTPAN 47 (263)
Q Consensus 6 ~~~hvv~vp~-p-~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~ 47 (263)
++++|+++.. + .-|+-.-+.+|++.|.++ ||+|++++....
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~-G~~v~v~~~~~~ 81 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSI-GIEARWFVIEGP 81 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHT-TCEEEEEECCCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhC-CCeEEEEEccCC
Confidence 3467776644 3 358889999999999999 999999987654
No 39
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=61.61 E-value=9.8 Score=34.91 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=28.6
Q ss_pred CCCC--CCCCeEEEecC---CC--CCCh-HHHHHHHHHHHcCCCceEEEEeCC
Q 037334 1 MGSI--SSDHHVVLFPF---MS--KGHI-IPILNLAQLLLRRPRVTVTVFTTP 45 (263)
Q Consensus 1 m~~~--~~~~hvv~vp~---p~--~GHi-~P~l~Lak~La~~~G~~VT~~~t~ 45 (263)
|+.. ..++||+++.+ |. .|=+ .=+-.|+|.|+.+ ||+|+++++.
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~-G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAAN-GHRVMVISPR 52 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTT-TCEEEEEEEC
T ss_pred CCcccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHc-CCeEEEEecC
Confidence 5555 34689999964 32 2322 3355799999999 9999999854
No 40
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=57.18 E-value=27 Score=28.72 Aligned_cols=26 Identities=23% Similarity=0.079 Sum_probs=20.8
Q ss_pred HHHHHHHHHcCCCceEEEEeCCCCchhh
Q 037334 24 ILNLAQLLLRRPRVTVTVFTTPANRPFT 51 (263)
Q Consensus 24 ~l~Lak~La~~~G~~VT~~~t~~~~~~~ 51 (263)
+..|++.|.+. | +|+++.+..+.+-.
T Consensus 17 i~aL~~~l~~~-g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 17 INALREALKSL-G-RVVVVAPDRNLSGV 42 (251)
T ss_dssp HHHHHHHHTTT-S-EEEEEEESSCCTTS
T ss_pred HHHHHHHHHhc-C-CEEEEecCCCccCC
Confidence 56789999888 8 99999988766543
No 41
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=56.43 E-value=15 Score=32.13 Aligned_cols=41 Identities=12% Similarity=-0.028 Sum_probs=28.9
Q ss_pred cHHHHHHHHhhCCCCcEEEE--cCcchhh-HHHHHHhCCCeEEEe
Q 037334 103 MQPHFERALESLPRVSFMVS--DGFLWWT-LDSANKFGFPRFVFY 144 (263)
Q Consensus 103 ~~~~l~~~l~~~~~~~~vI~--D~~~~~~-~~vA~~lgiP~v~f~ 144 (263)
....+++++++. +||+|++ |....|+ ...|+++|||.+.+.
T Consensus 99 ~~~~l~~~l~~~-kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 99 ILLGMQQVLSSE-QPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp HHHHHHHHHHHH-CCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred HHHHHHHHHHhc-CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 345677777776 9998866 4444455 567788999988764
No 42
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=55.58 E-value=18 Score=28.57 Aligned_cols=47 Identities=19% Similarity=-0.033 Sum_probs=39.8
Q ss_pred CCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhh
Q 037334 6 SDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSK 53 (263)
Q Consensus 6 ~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~ 53 (263)
++.+|++.+.++-.|-....-++..|..+ |++|.++......+.+..
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~-G~~v~~LG~~vp~~~l~~ 133 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESG-GFTVYNLGVDIEPGKFVE 133 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHT-TCEEEECCSSBCHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHC-CCEEEECCCCCCHHHHHH
Confidence 45689999999999999999999999999 999999987655555443
No 43
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=54.46 E-value=19 Score=29.56 Aligned_cols=46 Identities=15% Similarity=-0.052 Sum_probs=39.3
Q ss_pred CCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhh
Q 037334 6 SDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTS 52 (263)
Q Consensus 6 ~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~ 52 (263)
++.+|++...++-+|-....-++..|..+ |++|.++......+.+.
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~-G~~Vi~LG~~vp~e~l~ 167 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRAN-GYNVVDLGRDVPAEEVL 167 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHT-TCEEEEEEEECCSHHHH
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCCCCHHHHH
Confidence 46789999999999999999999999999 99999997665444443
No 44
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=51.42 E-value=18 Score=27.46 Aligned_cols=47 Identities=13% Similarity=-0.022 Sum_probs=39.4
Q ss_pred CCCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhh
Q 037334 5 SSDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTS 52 (263)
Q Consensus 5 ~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~ 52 (263)
.++++|++...++-+|-....-++..|..+ |++|.++......+.+.
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~-G~eVi~lG~~~p~e~lv 62 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDA-GFEVVYTGLRQTPEQVA 62 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHT-TCEEECCCSBCCHHHHH
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHC-CCEEEECCCCCCHHHHH
Confidence 356899999999999999999999999999 99999987665444443
No 45
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=51.13 E-value=25 Score=25.73 Aligned_cols=46 Identities=13% Similarity=0.027 Sum_probs=38.1
Q ss_pred CCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhh
Q 037334 6 SDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTS 52 (263)
Q Consensus 6 ~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~ 52 (263)
++.+|++...++-+|-....-++..|..+ |++|.++......+.+.
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~-G~~Vi~lG~~~p~e~~v 47 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNA-GFNVVNIGVLSPQELFI 47 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHT-TCEEEEEEEEECHHHHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHC-CCEEEECCCCCCHHHHH
Confidence 35789999999999999999999999999 99999887754444443
No 46
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=50.95 E-value=1e+02 Score=25.64 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=32.1
Q ss_pred eEEEecCCCCCChHHHHHHHHHHHcC-CCceEEEEeCCCCchh
Q 037334 9 HVVLFPFMSKGHIIPILNLAQLLLRR-PRVTVTVFTTPANRPF 50 (263)
Q Consensus 9 hvv~vp~p~~GHi~P~l~Lak~La~~-~G~~VT~~~t~~~~~~ 50 (263)
+|+++-.-+.|-+.=...+.+.|.++ ++.+|++++.+.+.+.
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l 44 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPL 44 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHH
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHH
Confidence 68888887778877777777777664 5899999998755443
No 47
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=50.94 E-value=16 Score=26.83 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=26.6
Q ss_pred CCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCC
Q 037334 7 DHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTP 45 (263)
Q Consensus 7 ~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~ 45 (263)
+.|++++ |.|++- ..+++.|..+ |++|+++...
T Consensus 3 ~~~vlI~---G~G~vG--~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVC---GHSILA--INTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CSCEEEE---CCSHHH--HHHHHHHHHT-TCCEEEEECC
T ss_pred CCcEEEE---CCCHHH--HHHHHHHHHC-CCCEEEEECC
Confidence 4688888 457665 6889999999 9999999764
No 48
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=50.61 E-value=17 Score=32.04 Aligned_cols=37 Identities=14% Similarity=-0.008 Sum_probs=27.6
Q ss_pred eEEEecC---C---CCCChHHHHHHHHHHHcCCCceEEEEeCCC
Q 037334 9 HVVLFPF---M---SKGHIIPILNLAQLLLRRPRVTVTVFTTPA 46 (263)
Q Consensus 9 hvv~vp~---p---~~GHi~P~l~Lak~La~~~G~~VT~~~t~~ 46 (263)
+|+++.. | .-|=-.-+.+|++.|+++ ||+|++++...
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~-G~~V~vi~~~~ 44 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAH-GVRTRTLIPGY 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTT-TCEEEEEEECC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHc-CCeEEEEeccc
Confidence 5666653 2 234456778999999999 99999998753
No 49
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=50.15 E-value=76 Score=27.57 Aligned_cols=35 Identities=11% Similarity=0.189 Sum_probs=24.6
Q ss_pred HHHHHHHhhCCCCcEEEE--cCcchhhHHHHHHhCCCe
Q 037334 105 PHFERALESLPRVSFMVS--DGFLWWTLDSANKFGFPR 140 (263)
Q Consensus 105 ~~l~~~l~~~~~~~~vI~--D~~~~~~~~vA~~lgiP~ 140 (263)
+.++++.++. ++|.|+. |.....+..+|++||+|.
T Consensus 65 ~~~~~~~~~~-~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 DVVRQTFVEF-PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHHS-CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHHhhhhc-CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 3355555564 8998874 555566778899999983
No 50
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=48.41 E-value=25 Score=27.99 Aligned_cols=47 Identities=9% Similarity=-0.068 Sum_probs=39.8
Q ss_pred CCCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhh
Q 037334 5 SSDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTS 52 (263)
Q Consensus 5 ~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~ 52 (263)
.++.+|++...++-.|-+...-++..|..+ |++|.++......+.+.
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~-G~~Vi~LG~~vp~e~iv 136 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGAN-GFQIVDLGVDVLNENVV 136 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHT-SCEEEECCSSCCHHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHC-CCeEEEcCCCCCHHHHH
Confidence 346799999999999999999999999999 99999998776655553
No 51
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=46.90 E-value=28 Score=27.23 Aligned_cols=41 Identities=15% Similarity=0.074 Sum_probs=29.7
Q ss_pred HHHHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEecccHH
Q 037334 104 QPHFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNY 149 (263)
Q Consensus 104 ~~~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~ 149 (263)
...++++.+ .++++||-|.. +.+.|+++|+|.+...++-.+
T Consensus 132 ~~~i~~l~~--~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 132 TTLISKVKT--ENIKIVVSGKT---VTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp HHHHHHHHH--TTCCEEEECHH---HHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHH--CCCeEEECCHH---HHHHHHHcCCcEEEEecCHHH
Confidence 344444444 48999999864 689999999999877764443
No 52
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=46.70 E-value=26 Score=30.57 Aligned_cols=41 Identities=2% Similarity=-0.224 Sum_probs=28.8
Q ss_pred cHHHHHHHHhhCCCCcEEEE--cCcchhh-HHHHHHhCCCeEEEe
Q 037334 103 MQPHFERALESLPRVSFMVS--DGFLWWT-LDSANKFGFPRFVFY 144 (263)
Q Consensus 103 ~~~~l~~~l~~~~~~~~vI~--D~~~~~~-~~vA~~lgiP~v~f~ 144 (263)
....+++++++. +||+|++ |....|+ ...|+++|||.+.+.
T Consensus 102 ~~~~l~~~l~~~-kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 102 VMNGINEVIAAE-NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp HHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHHc-CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 345577777776 9998865 3344554 667889999987665
No 53
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=46.26 E-value=21 Score=31.47 Aligned_cols=37 Identities=16% Similarity=0.008 Sum_probs=27.1
Q ss_pred eEEEecC---C--C-CCChHHHHHHHHHHHcCCCceEEEEeCCC
Q 037334 9 HVVLFPF---M--S-KGHIIPILNLAQLLLRRPRVTVTVFTTPA 46 (263)
Q Consensus 9 hvv~vp~---p--~-~GHi~P~l~Lak~La~~~G~~VT~~~t~~ 46 (263)
+|+++.. | . -|=-.=+.+|++.|+++ ||+|+++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~-G~~V~vi~~~~ 44 (485)
T 2qzs_A 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIAD-GVDARVLLPAF 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHHT-TCEEEEEEECC
T ss_pred eEEEEeeeccccccCCcHHHHHHHHHHHHHHc-CCEEEEEecCc
Confidence 5666653 2 1 23345677899999999 99999998753
No 54
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=45.24 E-value=37 Score=24.69 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=24.6
Q ss_pred CCcEEEEcCcchh--hHHHHHHh-------CCCeEEEecccH
Q 037334 116 RVSFMVSDGFLWW--TLDSANKF-------GFPRFVFYGMNN 148 (263)
Q Consensus 116 ~~~~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~a 148 (263)
+||+||.|..++. +.++++++ ++|.+.+...+.
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~ 98 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAK 98 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCC
Confidence 8999999999974 57777655 478776665554
No 55
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=44.63 E-value=24 Score=25.36 Aligned_cols=31 Identities=13% Similarity=-0.032 Sum_probs=21.6
Q ss_pred HhhCCCCcEEEEcCcchh--hHHHHHH---hCCCeEE
Q 037334 111 LESLPRVSFMVSDGFLWW--TLDSANK---FGFPRFV 142 (263)
Q Consensus 111 l~~~~~~~~vI~D~~~~~--~~~vA~~---lgiP~v~ 142 (263)
+++. +||+||.|..++. +.+++++ .++|.+.
T Consensus 49 ~~~~-~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~ 84 (123)
T 2lpm_A 49 ARKG-QFDIAIIDVNLDGEPSYPVADILAERNVPFIF 84 (123)
T ss_dssp HHHC-CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCC
T ss_pred HHhC-CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEE
Confidence 4443 8999999999874 4566654 4777553
No 56
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=44.44 E-value=37 Score=27.07 Aligned_cols=43 Identities=16% Similarity=0.131 Sum_probs=34.6
Q ss_pred CCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchh
Q 037334 6 SDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPF 50 (263)
Q Consensus 6 ~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~ 50 (263)
++.+|++--..+.|-+- ..+|.++|.++ |++|.++.|..-...
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~-g~eV~vv~T~~A~~f 45 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQE-EREVHFLISKAAQLV 45 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHT-TCEEEEEECHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHC-CCEEEEEECccHHHH
Confidence 44688887777777777 89999999999 999999999754333
No 57
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=44.39 E-value=16 Score=31.85 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=25.2
Q ss_pred CCeEEEec---CCCCCChHHHHHHHHHHHcCCCceEEEEeCC
Q 037334 7 DHHVVLFP---FMSKGHIIPILNLAQLLLRRPRVTVTVFTTP 45 (263)
Q Consensus 7 ~~hvv~vp---~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~ 45 (263)
+++|+++. || .|.-.-...+++.|+++ | +||+++..
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~-G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALR-G-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHH-S-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhC-C-ceEEEEec
Confidence 46888887 55 33322345688899999 9 99999543
No 58
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=43.63 E-value=50 Score=22.57 Aligned_cols=37 Identities=14% Similarity=0.166 Sum_probs=25.1
Q ss_pred HhhCCCCcEEEEcCcchh--hHHHHHHh-------CCCeEEEecccH
Q 037334 111 LESLPRVSFMVSDGFLWW--TLDSANKF-------GFPRFVFYGMNN 148 (263)
Q Consensus 111 l~~~~~~~~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~a 148 (263)
+++. +||+||.|..++. +.++.+++ ++|.+++.....
T Consensus 42 l~~~-~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 42 LSEF-TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp HTTB-CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred HHhc-CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 3443 8999999998763 45666554 478777666543
No 59
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=42.81 E-value=40 Score=27.23 Aligned_cols=41 Identities=22% Similarity=0.152 Sum_probs=36.2
Q ss_pred CCCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCC
Q 037334 5 SSDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPA 46 (263)
Q Consensus 5 ~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~ 46 (263)
.++..|++.--||.|=..-++++|.+|+.+ |++|.++....
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~-G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQ-GVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 346788999999999999999999999999 99998887764
No 60
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=42.13 E-value=31 Score=24.32 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeC
Q 037334 6 SDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTT 44 (263)
Q Consensus 6 ~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t 44 (263)
+..+|+++ |.|.+-- .+|+.|..+ |++|+++..
T Consensus 3 ~~m~i~Ii---G~G~iG~--~~a~~L~~~-g~~v~~~d~ 35 (140)
T 1lss_A 3 HGMYIIIA---GIGRVGY--TLAKSLSEK-GHDIVLIDI 35 (140)
T ss_dssp --CEEEEE---CCSHHHH--HHHHHHHHT-TCEEEEEES
T ss_pred CCCEEEEE---CCCHHHH--HHHHHHHhC-CCeEEEEEC
Confidence 34688888 4577754 579999999 999998865
No 61
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=40.90 E-value=35 Score=27.15 Aligned_cols=39 Identities=21% Similarity=0.100 Sum_probs=32.5
Q ss_pred CCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCc
Q 037334 7 DHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANR 48 (263)
Q Consensus 7 ~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~ 48 (263)
+.+|++.-..+.|-+- ..+|.++|.++ | +|.++.|..-.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~-g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEW-A-EVRAVVTKSSL 57 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTT-S-EEEEEECTGGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcC-C-CEEEEEcchHH
Confidence 4688888888887766 89999999998 9 99999998544
No 62
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=39.52 E-value=24 Score=25.87 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=27.0
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCC
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPAN 47 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~ 47 (263)
.+++++.- |.| +.|++.+++.|.++ |.+|+++ ...+
T Consensus 19 ~~~llIaG-G~G-iaPl~sm~~~l~~~-~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIGA-YTG-IVEVYPIAKAWQEI-GNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEEE-TTH-HHHHHHHHHHHHHT-TCEEEEE-EEEE
T ss_pred CeEEEEEC-cCc-HHHHHHHHHHHHhc-CCcEEEE-EeCC
Confidence 45655543 334 89999999999999 9999998 5433
No 63
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=39.47 E-value=26 Score=28.25 Aligned_cols=38 Identities=18% Similarity=0.308 Sum_probs=28.1
Q ss_pred HHHHHHHhhC--CCCcEEEEcCcchhhHHHHHHhCCCeEEEec
Q 037334 105 PHFERALESL--PRVSFMVSDGFLWWTLDSANKFGFPRFVFYG 145 (263)
Q Consensus 105 ~~l~~~l~~~--~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~ 145 (263)
+.+++.++++ .++++||-|.. +.+.|+++|+|.+...+
T Consensus 141 ee~~~~i~~l~~~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 141 EDARGQINELKANGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHCCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 3444444333 48999999864 68999999999988774
No 64
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=35.01 E-value=86 Score=21.77 Aligned_cols=37 Identities=8% Similarity=0.080 Sum_probs=24.2
Q ss_pred HhhCCCCcEEEEcCcchh--hHHHHHHh-------CCCeEEEecccH
Q 037334 111 LESLPRVSFMVSDGFLWW--TLDSANKF-------GFPRFVFYGMNN 148 (263)
Q Consensus 111 l~~~~~~~~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~a 148 (263)
+++. ++|+||.|..++. +.++.+++ ++|.+++.....
T Consensus 44 ~~~~-~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 89 (136)
T 3t6k_A 44 IYKN-LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGD 89 (136)
T ss_dssp HHHS-CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTC
T ss_pred HHhC-CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCC
Confidence 3443 8999999998763 35555443 577777666543
No 65
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=33.97 E-value=61 Score=22.91 Aligned_cols=37 Identities=14% Similarity=0.028 Sum_probs=24.3
Q ss_pred HhhCCCCcEEEEcCcchh--hHHHHHHh---------CCCeEEEecccH
Q 037334 111 LESLPRVSFMVSDGFLWW--TLDSANKF---------GFPRFVFYGMNN 148 (263)
Q Consensus 111 l~~~~~~~~vI~D~~~~~--~~~vA~~l---------giP~v~f~~~~a 148 (263)
+++. ++|+||.|..++. +.++.+++ .+|.+++.....
T Consensus 54 ~~~~-~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~ 101 (143)
T 3m6m_D 54 MAEE-DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVT 101 (143)
T ss_dssp HHHS-CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCCC
T ss_pred HhcC-CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCCC
Confidence 3443 8999999998764 45665554 267777665443
No 66
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=33.29 E-value=95 Score=20.91 Aligned_cols=38 Identities=13% Similarity=0.263 Sum_probs=24.7
Q ss_pred HhhCCCCcEEEEcCcchh--hHHHHHH----hCCCeEEEecccHH
Q 037334 111 LESLPRVSFMVSDGFLWW--TLDSANK----FGFPRFVFYGMNNY 149 (263)
Q Consensus 111 l~~~~~~~~vI~D~~~~~--~~~vA~~----lgiP~v~f~~~~a~ 149 (263)
+++. +||+||.|..++. +.++.++ .++|.+++......
T Consensus 42 ~~~~-~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~~ 85 (120)
T 3f6p_A 42 VEEL-QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSE 85 (120)
T ss_dssp HHTT-CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSCH
T ss_pred HhhC-CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCCh
Confidence 4443 8999999998764 3445443 36787776655443
No 67
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=32.30 E-value=20 Score=31.08 Aligned_cols=32 Identities=16% Similarity=-0.134 Sum_probs=25.0
Q ss_pred cccEEEEcchhhhhHHHHHHHhhcCCCceEEeCccCC
Q 037334 214 NSYGMIVNSFYELEPLFADHCNLVGKPKSWCVGPLCL 250 (263)
Q Consensus 214 ~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~ 250 (263)
.++++|+|++.++|... ....++++.|||++.
T Consensus 209 ~~~~~l~~~~~~l~~~~-----~~~~~~~~~vGp~~~ 240 (424)
T 2iya_A 209 APNRCIVALPRTFQIKG-----DTVGDNYTFVGPTYG 240 (424)
T ss_dssp CCSSEEESSCTTTSTTG-----GGCCTTEEECCCCCC
T ss_pred CCCcEEEEcchhhCCCc-----cCCCCCEEEeCCCCC
Confidence 57899999999999753 224567999999764
No 68
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=30.92 E-value=23 Score=32.06 Aligned_cols=35 Identities=9% Similarity=0.180 Sum_probs=27.1
Q ss_pred CCCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCC
Q 037334 5 SSDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTP 45 (263)
Q Consensus 5 ~~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~ 45 (263)
+.|+|||++=-..-| +.+|++|..+ |++||++...
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~-~~~VtLId~~ 74 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTK-KYNVSIISPR 74 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTT-TCEEEEEESS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhC-CCcEEEECCC
Confidence 457899998653333 6789999988 9999999764
No 69
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=30.46 E-value=26 Score=26.19 Aligned_cols=37 Identities=14% Similarity=0.154 Sum_probs=27.9
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCc
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANR 48 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~ 48 (263)
.+++++. .|.| +.|++.+++.|.++ |.+|+++ ...+.
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~-~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEI-GNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHH-TCEEEEE-EECBG
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhc-CCcEEEE-EeCCH
Confidence 3555554 3455 89999999999998 8899999 65443
No 70
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=29.72 E-value=68 Score=24.66 Aligned_cols=42 Identities=21% Similarity=0.184 Sum_probs=31.9
Q ss_pred CeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhh
Q 037334 8 HHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFT 51 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~ 51 (263)
.||++.-..+.|=+ =..+|.++|.++ |++|.++.|+.-.+.+
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~-g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSK-FDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTT-CSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHC-CCEEEEEECcCHHHHh
Confidence 47776666665555 489999999999 9999999998644433
No 71
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=29.05 E-value=2.4e+02 Score=23.10 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=24.2
Q ss_pred CCCcE-EEEcCcc-hhhHHHHHHhCCCeEEEeccc
Q 037334 115 PRVSF-MVSDGFL-WWTLDSANKFGFPRFVFYGMN 147 (263)
Q Consensus 115 ~~~~~-vI~D~~~-~~~~~vA~~lgiP~v~f~~~~ 147 (263)
.-||+ ||.|.-- .-+..-|.++|||.+.+.-+.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 35775 4788755 357888999999999876543
No 72
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=29.02 E-value=84 Score=22.65 Aligned_cols=38 Identities=11% Similarity=0.030 Sum_probs=28.0
Q ss_pred CeEEEecC-C--CCCChHHHHHHHHHHHcCCCceEEEEeCCC
Q 037334 8 HHVVLFPF-M--SKGHIIPILNLAQLLLRRPRVTVTVFTTPA 46 (263)
Q Consensus 8 ~hvv~vp~-p--~~GHi~P~l~Lak~La~~~G~~VT~~~t~~ 46 (263)
.+++++-. + ........+.||...++. |++|+++-+..
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~-g~eV~vFf~~d 56 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASM-EYETSVFFMIX 56 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEeC
Confidence 34444444 3 356778888999999999 99999887764
No 73
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=28.65 E-value=2.6e+02 Score=23.44 Aligned_cols=45 Identities=16% Similarity=0.222 Sum_probs=37.0
Q ss_pred CCeEEEecCCCCCChHHHHHHHHHHHcC-CCceEEEEeCCCCchhh
Q 037334 7 DHHVVLFPFMSKGHIIPILNLAQLLLRR-PRVTVTVFTTPANRPFT 51 (263)
Q Consensus 7 ~~hvv~vp~p~~GHi~P~l~Lak~La~~-~G~~VT~~~t~~~~~~~ 51 (263)
..+|+++-.-+.|-+.=...+.+.|..+ ++.+||+++.+.+.+.+
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~ 53 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVM 53 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGT
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHH
Confidence 3589999999999988888888888775 58999999988665444
No 74
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=28.13 E-value=53 Score=29.40 Aligned_cols=31 Identities=23% Similarity=0.465 Sum_probs=17.9
Q ss_pred HHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeE
Q 037334 107 FERALESLPRVSFMVSDGFLWWTLDSANKFGFPRF 141 (263)
Q Consensus 107 l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v 141 (263)
+++++++. ++|++|... +...+|+++|||.+
T Consensus 367 le~~i~~~-~pDllig~~---~~~~~a~k~gip~~ 397 (458)
T 3pdi_B 367 LEHAARAG-QAQLVIGNS---HALASARRLGVPLL 397 (458)
T ss_dssp HHHHHHHH-TCSEEEECT---THHHHHHHTTCCEE
T ss_pred HHHHHHhc-CCCEEEECh---hHHHHHHHcCCCEE
Confidence 44445443 666666653 34556666777665
No 75
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=27.76 E-value=79 Score=29.34 Aligned_cols=47 Identities=9% Similarity=-0.017 Sum_probs=40.4
Q ss_pred CCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCCchhhhh
Q 037334 6 SDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPANRPFTSK 53 (263)
Q Consensus 6 ~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~~~~~~~ 53 (263)
++.+||+...++-+|-+...-++..|..+ |++|..+......+.+..
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~-G~eVi~LG~~vP~e~iv~ 143 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCN-NYEIVDLGVMVPAEKILR 143 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTT-TCEEEECCSSBCHHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHC-CCEEEECCCCCCHHHHHH
Confidence 46799999999999999999999999999 999999987765555443
No 76
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=27.02 E-value=1.1e+02 Score=25.36 Aligned_cols=48 Identities=6% Similarity=-0.073 Sum_probs=34.6
Q ss_pred HHHHHHhhCCCCcEEEEcCcch--hhHHHHHHhCCCeEEEecccHHHHHHH
Q 037334 106 HFERALESLPRVSFMVSDGFLW--WTLDSANKFGFPRFVFYGMNNYAMSVS 154 (263)
Q Consensus 106 ~l~~~l~~~~~~~~vI~D~~~~--~~~~vA~~lgiP~v~f~~~~a~~~~~~ 154 (263)
.+.+.+++. ++.||+++.... -+..+|++.|++.+.+-+.+...+.++
T Consensus 228 ~l~~~ik~~-~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~~m 277 (291)
T 1pq4_A 228 QLIDTAKEN-NLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSSNL 277 (291)
T ss_dssp HHHHHHHTT-TCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHHHH
T ss_pred HHHHHHHHc-CCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHHHH
Confidence 344445553 899999998775 467799999999998887766433333
No 77
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=26.33 E-value=1.1e+02 Score=20.88 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=22.5
Q ss_pred CCcEEEEcCcch---hhHHHHHHh----CCCeEEEecccH
Q 037334 116 RVSFMVSDGFLW---WTLDSANKF----GFPRFVFYGMNN 148 (263)
Q Consensus 116 ~~~~vI~D~~~~---~~~~vA~~l----giP~v~f~~~~a 148 (263)
++|+||.|..+. .+.++.+++ ++|.+++.....
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 799999998764 234454443 788887766554
No 78
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=26.32 E-value=74 Score=23.37 Aligned_cols=37 Identities=14% Similarity=0.046 Sum_probs=28.3
Q ss_pred EEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCCC
Q 037334 10 VVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPAN 47 (263)
Q Consensus 10 vv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~~ 47 (263)
++++.....-...+.+.+|...++. |++|+++-|..-
T Consensus 11 ~II~~sg~~d~~~~a~~lA~~Aaa~-g~eV~iF~t~~g 47 (144)
T 2qs7_A 11 SIIVFSGTIDKLMPVGILTSGAAAS-GYEVNLFFTFWG 47 (144)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHHT-TCEEEEEECHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHc-CCcEEEEEehHH
Confidence 3444444467788899999999999 999999988643
No 79
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=26.29 E-value=78 Score=30.04 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=33.4
Q ss_pred CCCCeEEEecCCCC---CChHHHHH-HHHHHHcCCCceEEEEeCCC
Q 037334 5 SSDHHVVLFPFMSK---GHIIPILN-LAQLLLRRPRVTVTVFTTPA 46 (263)
Q Consensus 5 ~~~~hvv~vp~p~~---GHi~P~l~-Lak~La~~~G~~VT~~~t~~ 46 (263)
.+..||+..|..+. ||..|++. |.+.+....||.|+|+.+..
T Consensus 380 ~~~l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~ 425 (690)
T 3p0j_A 380 AKPHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDW 425 (690)
T ss_dssp SSCEEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTT
T ss_pred CCcceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 34568999997774 99999998 88877664489999998874
No 80
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=25.62 E-value=37 Score=26.12 Aligned_cols=19 Identities=32% Similarity=0.238 Sum_probs=16.6
Q ss_pred HHHHHHHHHcCCCceEEEEe
Q 037334 24 ILNLAQLLLRRPRVTVTVFT 43 (263)
Q Consensus 24 ~l~Lak~La~~~G~~VT~~~ 43 (263)
=+-+|..|+.+ |++||++=
T Consensus 14 GL~aA~~La~~-G~~V~v~E 32 (336)
T 3kkj_A 14 GLSAAQALTAA-GHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHHT-TCCEEEEC
T ss_pred HHHHHHHHHHC-CCCEEEEE
Confidence 37789999999 99999994
No 81
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=25.22 E-value=72 Score=25.37 Aligned_cols=31 Identities=10% Similarity=0.081 Sum_probs=24.3
Q ss_pred CCcEEEEcCcchhhHHHHHHhCCCeEEEecc
Q 037334 116 RVSFMVSDGFLWWTLDSANKFGFPRFVFYGM 146 (263)
Q Consensus 116 ~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 146 (263)
.+.+||+|---..+.+.|+++|||.+++-+.
T Consensus 31 eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 31 EVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp EEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred EEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 4678999854445778999999999987654
No 82
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=25.16 E-value=1.6e+02 Score=20.25 Aligned_cols=36 Identities=8% Similarity=0.146 Sum_probs=22.8
Q ss_pred HhhCCCCcEEEEcCcchh--hHHHHHHh-------CCCeEEEeccc
Q 037334 111 LESLPRVSFMVSDGFLWW--TLDSANKF-------GFPRFVFYGMN 147 (263)
Q Consensus 111 l~~~~~~~~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 147 (263)
++.. ++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 43 l~~~-~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 87 (138)
T 3c3m_A 43 LNAT-PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKP 87 (138)
T ss_dssp HHHS-CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSC
T ss_pred Hhcc-CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCC
Confidence 3443 7999999988753 34555443 46777665543
No 83
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=24.86 E-value=66 Score=21.82 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=27.6
Q ss_pred HHHHHHHHhhC---------CCCcEEEEcCcchhhHHHHHHhCCCeEE
Q 037334 104 QPHFERALESL---------PRVSFMVSDGFLWWTLDSANKFGFPRFV 142 (263)
Q Consensus 104 ~~~l~~~l~~~---------~~~~~vI~D~~~~~~~~vA~~lgiP~v~ 142 (263)
+..+++++++. .+.|++|+.--.+.=..=|+++|||.+.
T Consensus 23 R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~~gsK~~kA~~lgI~Ii~ 70 (92)
T 1l7b_A 23 REEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLT 70 (92)
T ss_dssp HHHHHHHHHHTTCEEESCCSSSCCCBEECSSSSTTHHHHHCSSSCCEE
T ss_pred HHHHHHHHHHcCCEEeCcccCCeeEEEeCCCCChHHHHHHHcCCcEEe
Confidence 45566666554 3678998886655446779999999873
No 84
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=24.43 E-value=1.5e+02 Score=19.87 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=23.6
Q ss_pred HhhCCCCcEEEEcCcchh--hHHHHHHh-----CCCeEEEecccH
Q 037334 111 LESLPRVSFMVSDGFLWW--TLDSANKF-----GFPRFVFYGMNN 148 (263)
Q Consensus 111 l~~~~~~~~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~a 148 (263)
+.+. ++|+||.|..++. +.++.+++ ++|.+++.....
T Consensus 43 ~~~~-~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 43 APDV-RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp GGGC-CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred HhcC-CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 3443 7999999987753 34555443 577776665543
No 85
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=23.84 E-value=1.5e+02 Score=20.98 Aligned_cols=38 Identities=13% Similarity=0.081 Sum_probs=23.6
Q ss_pred HHhhCCCCcEEEEcCcchh--hHHHHHH-------hCCCeEEEecccH
Q 037334 110 ALESLPRVSFMVSDGFLWW--TLDSANK-------FGFPRFVFYGMNN 148 (263)
Q Consensus 110 ~l~~~~~~~~vI~D~~~~~--~~~vA~~-------lgiP~v~f~~~~a 148 (263)
.+++. ++|+||.|..+.. +.+++++ -++|.+++.....
T Consensus 46 ~l~~~-~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~ 92 (154)
T 3gt7_A 46 FLSLT-RPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSD 92 (154)
T ss_dssp HHTTC-CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCS
T ss_pred HHHhC-CCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCC
Confidence 34443 8999999987653 3444433 2577777665443
No 86
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=23.62 E-value=1e+02 Score=24.92 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=27.4
Q ss_pred eEEEec-C-CCCCChHHHHHHHHHHHcCCCceEEEEe
Q 037334 9 HVVLFP-F-MSKGHIIPILNLAQLLLRRPRVTVTVFT 43 (263)
Q Consensus 9 hvv~vp-~-p~~GHi~P~l~Lak~La~~~G~~VT~~~ 43 (263)
+.++|. . .+.|=..=.+.|++.|.++ |.+|.++=
T Consensus 22 k~i~ItgT~t~vGKT~vs~gL~~~L~~~-G~~V~~fK 57 (242)
T 3qxc_A 22 HMLFISATNTNAGKTTCARLLAQYCNAC-GVKTILLK 57 (242)
T ss_dssp EEEEEEESSTTSSHHHHHHHHHHHHHHT-TCCEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHhC-CCceEEEe
Confidence 444443 3 6678999999999999999 99999984
No 87
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=23.59 E-value=46 Score=27.18 Aligned_cols=27 Identities=33% Similarity=0.288 Sum_probs=20.7
Q ss_pred CCCCChHHHHHHHHHHHcCCCceEEEEeCC
Q 037334 16 MSKGHIIPILNLAQLLLRRPRVTVTVFTTP 45 (263)
Q Consensus 16 p~~GHi~P~l~Lak~La~~~G~~VT~~~t~ 45 (263)
.|.|.+- -+|+++|.++ ||+|+.++-.
T Consensus 7 GatGfIG--~~L~~~L~~~-G~~V~~l~R~ 33 (298)
T 4b4o_A 7 GGTGFIG--TALTQLLNAR-GHEVTLVSRK 33 (298)
T ss_dssp TTTSHHH--HHHHHHHHHT-TCEEEEEESS
T ss_pred CCCCHHH--HHHHHHHHHC-CCEEEEEECC
Confidence 3455554 4689999999 9999998754
No 88
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=23.55 E-value=1.8e+02 Score=19.71 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=22.2
Q ss_pred CCcEEEEcCcchh--hHHHHHHh-------CCCeEEEecccH
Q 037334 116 RVSFMVSDGFLWW--TLDSANKF-------GFPRFVFYGMNN 148 (263)
Q Consensus 116 ~~~~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~a 148 (263)
++|+||.|..++. +.++++++ ++|.+++.....
T Consensus 51 ~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~ 92 (129)
T 3h1g_A 51 DTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGG 92 (129)
T ss_dssp TCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCCS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCCC
Confidence 7999999998763 45555443 467776665543
No 89
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.27 E-value=1.4e+02 Score=20.99 Aligned_cols=38 Identities=13% Similarity=0.124 Sum_probs=26.7
Q ss_pred HHHHHHHHhhC---------CCCcEEEEcCcchhh-HHHHHHhCCCeE
Q 037334 104 QPHFERALESL---------PRVSFMVSDGFLWWT-LDSANKFGFPRF 141 (263)
Q Consensus 104 ~~~l~~~l~~~---------~~~~~vI~D~~~~~~-~~vA~~lgiP~v 141 (263)
+..+++++++. .+-|+||+.--.... ..=|+++|||.+
T Consensus 39 R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~g~sKl~KA~~lgI~Ii 86 (112)
T 2ebu_A 39 RDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKII 86 (112)
T ss_dssp HHHHHHHHHHTTCEECSSCCSSCCEEEECSSCCSHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHcCCEEeccccCCeeEEEecCCCChHHHHHHHHcCCeEE
Confidence 56667766654 367899998655423 566899999876
No 90
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=23.14 E-value=70 Score=23.32 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=24.9
Q ss_pred CCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCC
Q 037334 7 DHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTP 45 (263)
Q Consensus 7 ~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~ 45 (263)
..+|+++- .|.+- ..+++.|..+ |++|+++...
T Consensus 19 ~~~v~IiG---~G~iG--~~la~~L~~~-g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFG---CGRLG--SLIANLASSS-GHSVVVVDKN 51 (155)
T ss_dssp CCEEEEEC---CSHHH--HHHHHHHHHT-TCEEEEEESC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHhC-CCeEEEEECC
Confidence 46888884 46654 4578999999 9999988654
No 91
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=23.05 E-value=1.5e+02 Score=20.80 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=23.6
Q ss_pred HHhhCCCCcEEEEcCcchh--hHHHHHHh-----CCCeEEEecccH
Q 037334 110 ALESLPRVSFMVSDGFLWW--TLDSANKF-----GFPRFVFYGMNN 148 (263)
Q Consensus 110 ~l~~~~~~~~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~a 148 (263)
.+++. ++|+||.|..+.. +.++.+++ ++|.+++.....
T Consensus 46 ~l~~~-~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 46 ALKGT-SVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp HHTTS-CCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred HHhcC-CCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 34443 7999999987652 34444433 577776665544
No 92
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=23.01 E-value=93 Score=24.45 Aligned_cols=38 Identities=24% Similarity=0.096 Sum_probs=29.5
Q ss_pred CeEEEecCCCCCChH-HHHHHHHHHHcCCCceEEEEeCCCC
Q 037334 8 HHVVLFPFMSKGHII-PILNLAQLLLRRPRVTVTVFTTPAN 47 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~-P~l~Lak~La~~~G~~VT~~~t~~~ 47 (263)
.+|++--..+ +... =.++|.++|.++ |++|.++.|..-
T Consensus 8 k~I~lgiTGs-~aa~~k~~~ll~~L~~~-g~eV~vv~T~~A 46 (201)
T 3lqk_A 8 KHVGFGLTGS-HCTYHEVLPQMERLVEL-GAKVTPFVTHTV 46 (201)
T ss_dssp CEEEEECCSC-GGGGGGTHHHHHHHHHT-TCEEEEECSSCS
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHhhC-CCEEEEEEChhH
Confidence 4666555544 5555 789999999999 999999998754
No 93
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=22.83 E-value=1.8e+02 Score=19.99 Aligned_cols=33 Identities=12% Similarity=0.064 Sum_probs=22.5
Q ss_pred CCcEEEEcCcchh--hHHHHHHh----CCCeEEEecccH
Q 037334 116 RVSFMVSDGFLWW--TLDSANKF----GFPRFVFYGMNN 148 (263)
Q Consensus 116 ~~~~vI~D~~~~~--~~~vA~~l----giP~v~f~~~~a 148 (263)
++|+||.|..++. +.++.+++ .+|.+++.....
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~ 86 (136)
T 2qzj_A 48 KYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINE 86 (136)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCC
Confidence 8999999998753 45555544 577777665543
No 94
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=22.22 E-value=1.4e+02 Score=20.78 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=26.3
Q ss_pred HHHHHHHHhhC---------CCCcEEEEcCcch-hhHHHHHHhCCCeE
Q 037334 104 QPHFERALESL---------PRVSFMVSDGFLW-WTLDSANKFGFPRF 141 (263)
Q Consensus 104 ~~~l~~~l~~~---------~~~~~vI~D~~~~-~~~~vA~~lgiP~v 141 (263)
+..+++++++. .+-|+||+.--.+ .=..=|+++|||.+
T Consensus 49 R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~g~sK~~kA~~lgI~Ii 96 (109)
T 2k6g_A 49 RDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKII 96 (109)
T ss_dssp HHHHHHHHHHTTCEEESSCCTTCCEEEECBCCCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHcCCEeeCcccCCceEEEECCCCChHHHHHHHHcCCeEE
Confidence 56667776654 3678999886544 22556899999876
No 95
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=22.15 E-value=88 Score=24.76 Aligned_cols=39 Identities=8% Similarity=-0.058 Sum_probs=27.7
Q ss_pred CeEEEecCCCCCChHH-HHHHHHHHHcCCCceEEEEeCCCCc
Q 037334 8 HHVVLFPFMSKGHIIP-ILNLAQLLLRRPRVTVTVFTTPANR 48 (263)
Q Consensus 8 ~hvv~vp~p~~GHi~P-~l~Lak~La~~~G~~VT~~~t~~~~ 48 (263)
.+|++--..+ +...- ..+|.++|.++ |++|.++.|..-.
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~-g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAE-GAEVRPVVSYTVQ 45 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHT-TCEEEEEECC---
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhC-CCEEEEEEehHHH
Confidence 4666555544 55554 78999999999 9999999998543
No 96
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=22.12 E-value=99 Score=25.89 Aligned_cols=40 Identities=15% Similarity=0.082 Sum_probs=25.8
Q ss_pred HHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEeccc
Q 037334 106 HFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFYGMN 147 (263)
Q Consensus 106 ~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 147 (263)
.+|.+++- +||+||......-..+--++.|||++++...+
T Consensus 108 n~E~i~al--~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~~ 147 (335)
T 4hn9_A 108 NTEACVAA--TPDVVFLPMKLKKTADTLESLGIKAVVVNPED 147 (335)
T ss_dssp CHHHHHHT--CCSEEEEEGGGHHHHHHHHHTTCCEEEECCCS
T ss_pred CHHHHHhc--CCCEEEEeCcchhHHHHHHHcCCCEEEEcCCC
Confidence 46666553 89999986542222333466799999986543
No 97
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=21.88 E-value=1.7e+02 Score=20.12 Aligned_cols=37 Identities=11% Similarity=0.081 Sum_probs=22.8
Q ss_pred HHhhCCCCcEEEEcCcchh--hHHHHHHh-----CCCeEEEecccH
Q 037334 110 ALESLPRVSFMVSDGFLWW--TLDSANKF-----GFPRFVFYGMNN 148 (263)
Q Consensus 110 ~l~~~~~~~~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~a 148 (263)
.+++. ++|+||.|. +.. +.++.+++ ++|++++.....
T Consensus 43 ~l~~~-~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (142)
T 2qxy_A 43 FLRRE-KIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVD 86 (142)
T ss_dssp HHTTS-CCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCC
T ss_pred HHhcc-CCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCC
Confidence 34443 899999998 653 33444333 578777766543
No 98
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=21.72 E-value=98 Score=27.53 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=20.6
Q ss_pred HHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEE
Q 037334 107 FERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFV 142 (263)
Q Consensus 107 l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~ 142 (263)
+++++++. ++|++|.+. +...+|+++|||.+.
T Consensus 377 l~~~i~~~-~pDl~ig~~---~~~~~a~k~gip~~~ 408 (458)
T 1mio_B 377 VHQWIKNE-GVDLLISNT---YGKFIAREENIPFVR 408 (458)
T ss_dssp HHHHHHHS-CCSEEEESG---GGHHHHHHHTCCEEE
T ss_pred HHHHHHhc-CCCEEEeCc---chHHHHHHcCCCEEE
Confidence 45555554 777777664 346667777777764
No 99
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=21.51 E-value=78 Score=28.50 Aligned_cols=35 Identities=11% Similarity=0.211 Sum_probs=26.5
Q ss_pred HHHHHHhhCCCCcEEEEcCcchhhHHHHHHhCCCeEEEe
Q 037334 106 HFERALESLPRVSFMVSDGFLWWTLDSANKFGFPRFVFY 144 (263)
Q Consensus 106 ~l~~~l~~~~~~~~vI~D~~~~~~~~vA~~lgiP~v~f~ 144 (263)
.+++++++. +||++|... ....+|+++|||.+-+.
T Consensus 392 el~~~i~~~-~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 392 VLLKTVDEY-QADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp HHHHHHHHT-TCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred HHHHHHHhc-CCCEEEECC---chhHHHHHcCCCEEEec
Confidence 456666665 999999854 46788999999987543
No 100
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=21.16 E-value=1.9e+02 Score=19.13 Aligned_cols=38 Identities=13% Similarity=0.056 Sum_probs=23.9
Q ss_pred HHhhCCCCcEEEEcCcchh--hHHHHHHh----CCCeEEEecccH
Q 037334 110 ALESLPRVSFMVSDGFLWW--TLDSANKF----GFPRFVFYGMNN 148 (263)
Q Consensus 110 ~l~~~~~~~~vI~D~~~~~--~~~vA~~l----giP~v~f~~~~a 148 (263)
.+++. ++|+||.|.-++. +.++++++ ++|.+++.....
T Consensus 41 ~~~~~-~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 84 (122)
T 1zgz_A 41 IMQNQ-SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSD 84 (122)
T ss_dssp HHHHS-CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred HHhcC-CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCC
Confidence 34443 7999999987753 45555544 467666655443
No 101
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.14 E-value=1.6e+02 Score=20.95 Aligned_cols=39 Identities=5% Similarity=-0.124 Sum_probs=25.9
Q ss_pred HHHHHHHHhhC---------CCCcEEEEcCcchhhHHHHHHhCCCeEE
Q 037334 104 QPHFERALESL---------PRVSFMVSDGFLWWTLDSANKFGFPRFV 142 (263)
Q Consensus 104 ~~~l~~~l~~~---------~~~~~vI~D~~~~~~~~vA~~lgiP~v~ 142 (263)
+..+++++..+ ...+.||++....-=..-|.++|||+|.
T Consensus 38 r~~l~~~i~~~Gg~v~~~~s~~~ThLI~~~~~~~K~~~A~~~gi~IV~ 85 (129)
T 2d8m_A 38 RSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVR 85 (129)
T ss_dssp HHHHHHHHHHTTEEEESSCCTTCCEEEESSSSCHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCEEeCCcCCCCeEEEecCCCChHHHHHHHCCCcEec
Confidence 34455555544 3678999986544335678889999875
No 102
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=20.81 E-value=1.9e+02 Score=18.97 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=22.4
Q ss_pred CCcEEEEcCcchh--hHHHHHH----hCCCeEEEecccH
Q 037334 116 RVSFMVSDGFLWW--TLDSANK----FGFPRFVFYGMNN 148 (263)
Q Consensus 116 ~~~~vI~D~~~~~--~~~vA~~----lgiP~v~f~~~~a 148 (263)
++|+||.|..++. +.+++++ -++|.+++.....
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 7999999987752 3444443 3688777766554
No 103
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=20.52 E-value=1.2e+02 Score=25.54 Aligned_cols=39 Identities=15% Similarity=0.119 Sum_probs=26.1
Q ss_pred HHHHHHHhhCCCCcEEEEcCcch-hhHHHHHHhCCCeEEEec
Q 037334 105 PHFERALESLPRVSFMVSDGFLW-WTLDSANKFGFPRFVFYG 145 (263)
Q Consensus 105 ~~l~~~l~~~~~~~~vI~D~~~~-~~~~vA~~lgiP~v~f~~ 145 (263)
..+|++++- +||+||...... -..+..+++|||++++..
T Consensus 87 ~n~E~Ilal--~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 87 PDLESLITL--QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCHHHHHHH--CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCHHHHhcC--CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 356666654 799999765422 123456778999998854
No 104
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=20.51 E-value=1.2e+02 Score=23.64 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=35.9
Q ss_pred CCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCCC
Q 037334 6 SDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTPA 46 (263)
Q Consensus 6 ~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~~ 46 (263)
.+.-|+++.-+|.|=..-.+.+|.+.+.+ |.+|-|+....
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~-G~rV~~vQF~K 66 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGH-GKNVGVVQFIK 66 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHC-CCeEEEEEeeC
Confidence 45689999999999999999999999999 99999996554
No 105
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=20.30 E-value=54 Score=23.53 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=26.0
Q ss_pred CCCeEEEecCCCCCChHHHHHHHHHHHcCCCceEEEEeCC
Q 037334 6 SDHHVVLFPFMSKGHIIPILNLAQLLLRRPRVTVTVFTTP 45 (263)
Q Consensus 6 ~~~hvv~vp~p~~GHi~P~l~Lak~La~~~G~~VT~~~t~ 45 (263)
-+.||+++-+ |.+ -..+|+.|..+ |++|+++...
T Consensus 6 ~~~~viIiG~---G~~--G~~la~~L~~~-g~~v~vid~~ 39 (140)
T 3fwz_A 6 ICNHALLVGY---GRV--GSLLGEKLLAS-DIPLVVIETS 39 (140)
T ss_dssp CCSCEEEECC---SHH--HHHHHHHHHHT-TCCEEEEESC
T ss_pred CCCCEEEECc---CHH--HHHHHHHHHHC-CCCEEEEECC
Confidence 3568888865 443 34789999999 9999999765
No 106
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=20.09 E-value=1.6e+02 Score=21.74 Aligned_cols=37 Identities=14% Similarity=0.081 Sum_probs=24.0
Q ss_pred HhhCCCCcEEEEcCcchh--hHHHHHHh-----CCCeEEEecccH
Q 037334 111 LESLPRVSFMVSDGFLWW--TLDSANKF-----GFPRFVFYGMNN 148 (263)
Q Consensus 111 l~~~~~~~~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~a 148 (263)
+++. +||+||.|..++. +.++++++ ++|.+++.....
T Consensus 47 ~~~~-~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~ 90 (184)
T 3rqi_A 47 AGAE-KFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYAS 90 (184)
T ss_dssp HTTS-CCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCC
T ss_pred HhhC-CCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 4443 8999999998763 35555433 577776665543
Done!