Query 037345
Match_columns 357
No_of_seqs 135 out of 1550
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 19:20:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.2 5.2E-09 1.8E-13 93.3 25.3 193 117-333 69-283 (315)
2 3ii7_A Kelch-like protein 7; p 99.2 4.2E-09 1.4E-13 93.4 21.5 208 100-333 51-278 (306)
3 2woz_A Kelch repeat and BTB do 99.2 2E-08 6.8E-13 89.6 24.6 210 99-333 51-293 (318)
4 1zgk_A Kelch-like ECH-associat 99.1 1.7E-08 5.7E-13 89.7 23.9 207 101-334 67-294 (308)
5 2vpj_A Kelch-like protein 12; 99.1 2.4E-08 8.1E-13 88.2 24.1 207 100-333 58-284 (301)
6 2xn4_A Kelch-like protein 2; s 99.1 2E-08 6.9E-13 88.8 23.5 207 101-334 58-283 (302)
7 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 4.1E-11 1.4E-15 76.7 3.7 42 2-43 7-48 (53)
8 2e31_A FBS1, F-box only protei 99.1 3.8E-11 1.3E-15 104.2 4.5 51 1-51 48-99 (297)
9 3ii7_A Kelch-like protein 7; p 99.0 6.1E-08 2.1E-12 85.8 22.1 191 115-333 24-231 (306)
10 2vpj_A Kelch-like protein 12; 99.0 1.3E-07 4.3E-12 83.5 22.9 193 115-334 31-238 (301)
11 2uvk_A YJHT; unknown function, 99.0 3.1E-08 1.1E-12 89.7 18.6 214 101-334 16-301 (357)
12 4asc_A Kelch repeat and BTB do 99.0 2.1E-07 7.3E-12 82.7 22.8 199 116-334 14-228 (315)
13 1zgk_A Kelch-like ECH-associat 98.9 3.8E-08 1.3E-12 87.3 16.8 196 115-334 39-247 (308)
14 2xn4_A Kelch-like protein 2; s 98.9 1.9E-07 6.5E-12 82.4 21.1 192 116-334 31-236 (302)
15 2zwa_A Leucine carboxyl methyl 98.8 3.8E-07 1.3E-11 90.1 21.5 216 103-336 396-644 (695)
16 2woz_A Kelch repeat and BTB do 98.8 2.7E-07 9.4E-12 82.1 18.7 143 182-334 81-238 (318)
17 2uvk_A YJHT; unknown function, 98.7 1.6E-06 5.4E-11 78.4 20.8 147 178-333 169-348 (357)
18 2ovr_B FBW7, F-BOX/WD repeat p 98.7 1.5E-05 5E-10 74.1 27.5 49 1-49 16-64 (445)
19 3v7d_B Cell division control p 98.6 4.1E-05 1.4E-09 71.3 27.9 43 4-46 15-58 (464)
20 1p22_A F-BOX/WD-repeat protein 98.5 4.7E-06 1.6E-10 77.3 18.7 43 4-46 11-57 (435)
21 1k3i_A Galactose oxidase precu 98.1 3.6E-05 1.2E-09 75.5 15.0 206 104-334 197-448 (656)
22 1k3i_A Galactose oxidase precu 98.1 7.1E-05 2.4E-09 73.4 15.2 218 99-334 248-504 (656)
23 2zwa_A Leucine carboxyl methyl 97.9 0.00011 3.7E-09 72.6 13.5 151 177-334 412-590 (695)
24 3l2o_B F-box only protein 4; s 97.7 1.7E-05 5.8E-10 68.2 3.6 48 4-51 5-52 (312)
25 2ast_B S-phase kinase-associat 97.6 2.6E-05 9E-10 69.6 2.8 41 2-42 7-47 (336)
26 2p1m_B Transport inhibitor res 97.0 0.00021 7.1E-09 69.0 2.1 36 2-37 4-40 (594)
27 2z2n_A Virginiamycin B lyase; 96.7 0.25 8.5E-06 42.0 20.7 193 99-331 104-299 (299)
28 3ogk_B Coronatine-insensitive 96.5 0.00076 2.6E-08 65.0 2.1 34 4-37 13-47 (592)
29 1q7f_A NHL, brain tumor CG1071 95.5 0.97 3.3E-05 38.2 19.0 207 99-335 35-246 (286)
30 3jrp_A Fusion protein of prote 93.4 3.6 0.00012 35.8 19.2 66 262-329 171-242 (379)
31 1q7f_A NHL, brain tumor CG1071 93.4 3.1 0.00011 35.0 22.3 190 102-327 86-280 (286)
32 3jro_A Fusion protein of prote 93.2 4.4 0.00015 39.9 17.7 66 262-329 169-240 (753)
33 3mbr_X Glutamine cyclotransfer 92.9 2.7 9.2E-05 35.1 13.3 112 214-335 28-142 (243)
34 2qc5_A Streptogramin B lactona 92.9 3.7 0.00013 34.4 20.8 196 98-334 24-224 (300)
35 2z2n_A Virginiamycin B lyase; 92.2 4.6 0.00016 33.8 21.4 198 99-336 62-263 (299)
36 3e5z_A Putative gluconolactona 91.5 5.7 0.0002 33.5 18.0 206 99-332 74-291 (296)
37 3dsm_A Uncharacterized protein 91.0 7.2 0.00025 33.8 17.7 139 182-335 67-221 (328)
38 2qc5_A Streptogramin B lactona 89.8 7.9 0.00027 32.3 20.9 197 99-335 67-267 (300)
39 1rwi_B Serine/threonine-protei 89.7 7.6 0.00026 32.0 18.0 189 99-330 72-267 (270)
40 3q7m_A Lipoprotein YFGL, BAMB; 88.4 8.5 0.00029 33.8 13.2 111 210-332 47-167 (376)
41 3nol_A Glutamine cyclotransfer 88.1 5.8 0.0002 33.5 11.1 111 215-335 51-164 (262)
42 4gga_A P55CDC, cell division c 87.6 15 0.00051 32.8 21.1 196 102-333 114-316 (420)
43 2iwa_A Glutamine cyclotransfer 87.5 11 0.00037 31.9 12.5 109 217-334 32-143 (266)
44 3u4y_A Uncharacterized protein 87.4 13 0.00043 31.7 17.7 190 104-330 9-210 (331)
45 3q7m_A Lipoprotein YFGL, BAMB; 87.3 13 0.00044 32.6 13.7 112 210-333 97-213 (376)
46 3hfq_A Uncharacterized protein 87.0 6.8 0.00023 33.8 11.6 103 230-333 18-124 (347)
47 3e5z_A Putative gluconolactona 86.2 14 0.00048 31.0 22.0 197 107-336 42-255 (296)
48 3scy_A Hypothetical bacterial 85.7 17 0.00058 31.5 15.5 114 215-334 220-346 (361)
49 3dsm_A Uncharacterized protein 85.5 17 0.00058 31.3 21.9 195 103-331 52-257 (328)
50 3hfq_A Uncharacterized protein 84.7 18 0.00062 31.0 21.2 72 261-334 249-326 (347)
51 4e54_B DNA damage-binding prot 83.8 24 0.00081 31.6 19.5 59 274-332 377-435 (435)
52 3nok_A Glutaminyl cyclase; bet 83.4 12 0.00043 31.5 10.8 105 215-332 63-169 (268)
53 1k8k_C P40, ARP2/3 complex 41 83.3 13 0.00044 32.1 11.7 97 230-329 30-129 (372)
54 4e54_B DNA damage-binding prot 81.0 31 0.001 30.9 15.4 196 104-331 131-331 (435)
55 3dwl_C Actin-related protein 2 80.9 27 0.00091 30.2 14.9 96 230-330 122-239 (377)
56 1kv9_A Type II quinohemoprotei 79.8 20 0.00068 34.7 12.4 115 210-333 60-193 (668)
57 2ad6_A Methanol dehydrogenase 79.4 19 0.00066 34.1 11.9 111 210-332 56-190 (571)
58 2dg1_A DRP35, lactonase; beta 78.4 23 0.00078 30.1 11.4 113 215-333 54-177 (333)
59 1rwi_B Serine/threonine-protei 77.7 27 0.00093 28.4 20.1 195 99-333 29-228 (270)
60 1l0q_A Surface layer protein; 77.7 35 0.0012 29.6 22.8 185 106-333 3-195 (391)
61 3hrp_A Uncharacterized protein 77.5 24 0.00083 31.6 11.6 109 215-333 140-255 (409)
62 1l0q_A Surface layer protein; 76.6 37 0.0013 29.4 20.6 195 99-333 37-239 (391)
63 1ri6_A Putative isomerase YBHE 76.2 34 0.0012 28.8 13.1 110 216-332 48-166 (343)
64 1yiq_A Quinohemoprotein alcoho 75.3 25 0.00084 34.2 11.6 113 210-332 64-197 (689)
65 3bws_A Protein LP49; two-domai 75.2 43 0.0015 29.5 14.5 111 216-333 133-249 (433)
66 1kb0_A Quinohemoprotein alcoho 74.8 18 0.00063 35.0 10.6 113 210-332 71-204 (677)
67 3fm0_A Protein CIAO1; WDR39,SG 74.0 42 0.0014 28.8 13.8 98 230-331 83-185 (345)
68 3ei3_B DNA damage-binding prot 73.7 44 0.0015 28.9 18.8 184 115-330 96-285 (383)
69 1npe_A Nidogen, entactin; glyc 73.7 36 0.0012 27.9 22.2 197 100-335 43-247 (267)
70 2dg1_A DRP35, lactonase; beta 73.4 41 0.0014 28.5 20.1 207 102-336 53-272 (333)
71 4gqb_B Methylosome protein 50; 73.2 45 0.0015 28.8 20.4 98 230-333 192-295 (344)
72 2ojh_A Uncharacterized protein 72.3 38 0.0013 27.6 18.6 200 100-333 48-264 (297)
73 3v65_B Low-density lipoprotein 72.1 53 0.0018 29.1 18.6 108 215-333 169-283 (386)
74 3m0c_C LDL receptor, low-densi 71.1 85 0.0029 31.1 21.1 156 147-330 473-635 (791)
75 1n7d_A LDL receptor, low-densi 70.9 54 0.0018 31.9 12.8 110 216-333 507-620 (699)
76 2hqs_A Protein TOLB; TOLB, PAL 70.3 59 0.002 28.9 22.5 196 115-345 203-405 (415)
77 4aez_A CDC20, WD repeat-contai 69.9 57 0.002 28.6 22.5 181 115-333 113-299 (401)
78 3vgz_A Uncharacterized protein 69.8 50 0.0017 27.9 25.8 202 104-333 100-309 (353)
79 4a11_B DNA excision repair pro 68.8 57 0.0019 28.2 18.0 32 301-332 338-370 (408)
80 3fm0_A Protein CIAO1; WDR39,SG 68.7 56 0.0019 28.0 21.5 62 262-325 161-223 (345)
81 3hrp_A Uncharacterized protein 67.7 68 0.0023 28.6 21.5 201 98-333 135-360 (409)
82 3g4e_A Regucalcin; six bladed 67.6 54 0.0018 27.4 21.8 206 101-345 21-248 (297)
83 3mmy_A MRNA export factor; mRN 67.4 57 0.0019 27.6 20.2 61 273-333 236-310 (368)
84 3fvz_A Peptidyl-glycine alpha- 66.7 60 0.0021 27.6 18.5 203 101-327 98-322 (329)
85 3sjl_D Methylamine dehydrogena 66.6 71 0.0024 28.5 14.3 112 215-332 236-368 (386)
86 3bg1_A Protein SEC13 homolog; 66.5 58 0.002 27.4 16.5 55 273-327 187-247 (316)
87 3mmy_A MRNA export factor; mRN 65.7 61 0.0021 27.4 13.8 69 263-333 54-123 (368)
88 1flg_A Protein (quinoprotein e 65.2 59 0.002 30.8 11.6 115 210-333 62-199 (582)
89 2pm9_A Protein WEB1, protein t 64.8 70 0.0024 27.8 15.6 65 262-330 274-340 (416)
90 2p4o_A Hypothetical protein; p 64.7 63 0.0022 27.2 11.7 105 215-329 41-149 (306)
91 3no2_A Uncharacterized protein 64.6 61 0.0021 27.0 18.3 110 212-330 83-198 (276)
92 2aq5_A Coronin-1A; WD40 repeat 64.1 74 0.0025 27.8 20.8 203 104-333 93-307 (402)
93 2mad_H Methylamine dehydrogena 63.8 77 0.0026 27.9 13.3 113 216-333 224-356 (373)
94 4ggc_A P55CDC, cell division c 63.7 62 0.0021 26.8 12.6 60 274-333 44-104 (318)
95 4gga_A P55CDC, cell division c 63.4 79 0.0027 27.9 13.6 89 242-333 94-184 (420)
96 4g56_B MGC81050 protein; prote 63.1 74 0.0025 27.5 16.5 195 102-333 103-307 (357)
97 3dwl_C Actin-related protein 2 62.8 15 0.00052 31.8 6.6 96 230-329 33-133 (377)
98 2ghs_A AGR_C_1268P; regucalcin 62.8 72 0.0025 27.2 13.0 106 216-333 60-174 (326)
99 3i2n_A WD repeat-containing pr 62.1 71 0.0024 26.9 18.8 66 262-329 270-355 (357)
100 3v65_B Low-density lipoprotein 62.1 84 0.0029 27.7 20.7 194 101-334 124-326 (386)
101 3vl1_A 26S proteasome regulato 61.8 81 0.0028 27.5 18.5 94 230-327 313-419 (420)
102 3nol_A Glutamine cyclotransfer 60.7 74 0.0025 26.6 16.2 132 181-333 67-207 (262)
103 1gxr_A ESG1, transducin-like e 60.1 74 0.0025 26.5 22.3 193 101-333 105-302 (337)
104 3g4e_A Regucalcin; six bladed 59.1 78 0.0027 26.4 14.1 101 216-327 24-139 (297)
105 1pjx_A Dfpase, DIISOPROPYLFLUO 58.8 77 0.0026 26.2 21.6 205 103-336 27-266 (314)
106 1pby_B Quinohemoprotein amine 58.6 79 0.0027 26.3 16.3 94 231-332 220-315 (337)
107 3v64_C Agrin; beta propeller, 58.0 93 0.0032 27.0 18.4 109 215-333 126-240 (349)
108 3iuj_A Prolyl endopeptidase; h 58.0 1.4E+02 0.0046 28.8 16.7 113 215-333 290-411 (693)
109 3f3f_A Nucleoporin SEH1; struc 57.2 82 0.0028 26.1 14.0 66 263-330 71-146 (351)
110 3tc9_A Hypothetical hydrolase; 56.4 95 0.0032 27.9 10.9 110 216-333 149-263 (430)
111 1w6s_A Methanol dehydrogenase 56.2 90 0.0031 29.7 11.1 112 210-333 56-197 (599)
112 3bws_A Protein LP49; two-domai 55.7 1.1E+02 0.0036 26.9 22.1 194 102-333 178-396 (433)
113 3f3f_A Nucleoporin SEH1; struc 55.4 89 0.003 25.9 12.3 66 262-329 22-92 (351)
114 1gxr_A ESG1, transducin-like e 54.7 91 0.0031 25.8 23.9 197 100-333 58-261 (337)
115 2fp8_A Strictosidine synthase; 54.3 98 0.0034 26.1 17.9 112 216-336 137-278 (322)
116 1n7d_A LDL receptor, low-densi 53.0 1.6E+02 0.0054 28.5 12.4 56 211-270 543-602 (699)
117 1nir_A Nitrite reductase; hemo 52.9 1.5E+02 0.005 27.6 18.4 196 102-333 146-361 (543)
118 3vgz_A Uncharacterized protein 52.8 1E+02 0.0035 25.9 20.0 112 216-333 151-268 (353)
119 3jro_A Fusion protein of prote 52.6 1.7E+02 0.0059 28.4 16.0 96 230-329 31-134 (753)
120 3mkq_A Coatomer beta'-subunit; 52.3 1.7E+02 0.0058 28.3 24.6 194 100-333 62-265 (814)
121 3fvz_A Peptidyl-glycine alpha- 51.7 1.1E+02 0.0038 25.9 20.9 114 216-333 154-283 (329)
122 4hw6_A Hypothetical protein, I 51.4 96 0.0033 28.0 10.1 112 211-330 142-262 (433)
123 1ijq_A LDL receptor, low-densi 50.6 1.2E+02 0.004 25.8 21.0 196 100-333 37-245 (316)
124 3lrv_A PRE-mRNA-splicing facto 50.2 1.2E+02 0.004 25.8 11.9 97 230-330 149-247 (343)
125 3k26_A Polycomb protein EED; W 50.0 67 0.0023 27.2 8.6 93 230-330 95-195 (366)
126 1r5m_A SIR4-interacting protei 49.8 1.3E+02 0.0043 26.0 18.0 92 230-326 310-424 (425)
127 2bkl_A Prolyl endopeptidase; m 49.8 1.8E+02 0.0062 27.8 21.0 189 116-333 203-403 (695)
128 3dr2_A Exported gluconolactona 49.6 59 0.002 27.3 8.0 108 216-333 55-184 (305)
129 3jrp_A Fusion protein of prote 49.3 1.2E+02 0.0041 25.6 17.3 96 230-329 33-136 (379)
130 2hz6_A Endoplasmic reticulum t 49.2 3.9 0.00013 36.3 0.3 29 210-242 3-31 (369)
131 1jmx_B Amine dehydrogenase; ox 48.8 1.2E+02 0.004 25.4 11.5 109 215-330 9-137 (349)
132 3k26_A Polycomb protein EED; W 48.1 1.2E+02 0.0042 25.4 21.5 63 263-327 299-366 (366)
133 4aow_A Guanine nucleotide-bind 48.1 1.2E+02 0.0041 25.2 18.7 93 230-329 237-339 (340)
134 3v9f_A Two-component system se 47.9 2E+02 0.007 27.9 19.4 107 217-333 374-484 (781)
135 2hqs_A Protein TOLB; TOLB, PAL 47.7 1.5E+02 0.0051 26.2 19.6 184 115-333 159-350 (415)
136 3ow8_A WD repeat-containing pr 47.1 1.3E+02 0.0044 25.4 11.4 68 263-332 48-116 (321)
137 4ggc_A P55CDC, cell division c 46.7 1.2E+02 0.0041 24.9 21.8 27 102-130 34-60 (318)
138 3v9f_A Two-component system se 46.5 2.1E+02 0.0073 27.7 21.8 198 103-333 322-530 (781)
139 2pm7_B Protein transport prote 46.2 1.3E+02 0.0043 24.9 19.6 64 263-328 170-239 (297)
140 3m0c_C LDL receptor, low-densi 46.1 2.3E+02 0.0079 28.0 16.7 52 215-270 568-620 (791)
141 1nir_A Nitrite reductase; hemo 45.6 1.9E+02 0.0065 26.8 18.1 114 215-331 333-462 (543)
142 2ovr_B FBW7, F-BOX/WD repeat p 45.5 1.6E+02 0.0055 26.0 22.2 111 212-328 324-443 (445)
143 3i2n_A WD repeat-containing pr 45.4 1.3E+02 0.0046 25.1 18.7 95 230-329 139-245 (357)
144 2p4o_A Hypothetical protein; p 45.3 1.3E+02 0.0046 25.1 20.7 195 103-333 41-247 (306)
145 2ojh_A Uncharacterized protein 45.3 1.2E+02 0.004 24.4 15.3 138 181-333 24-168 (297)
146 3frx_A Guanine nucleotide-bind 45.1 1.4E+02 0.0047 25.1 10.5 69 262-332 29-101 (319)
147 4aez_A CDC20, WD repeat-contai 44.0 1.6E+02 0.0055 25.6 22.9 100 230-333 284-386 (401)
148 4ery_A WD repeat-containing pr 43.8 1.4E+02 0.0047 24.7 20.5 98 230-333 171-274 (312)
149 1ri6_A Putative isomerase YBHE 43.6 1.4E+02 0.0048 24.8 23.4 112 216-333 188-316 (343)
150 3dr2_A Exported gluconolactona 43.2 1.4E+02 0.0049 24.8 18.6 102 230-336 169-276 (305)
151 1yfq_A Cell cycle arrest prote 43.1 1.4E+02 0.0049 24.8 12.4 71 262-335 22-97 (342)
152 1k8k_C P40, ARP2/3 complex 41 42.5 1.5E+02 0.0053 24.9 23.3 197 103-333 18-239 (372)
153 1ddw_A GLGF-domain protein hom 42.3 35 0.0012 24.8 4.5 39 116-165 12-51 (120)
154 1npe_A Nidogen, entactin; glyc 41.6 1.4E+02 0.0048 24.2 12.5 111 216-333 90-204 (267)
155 3scy_A Hypothetical bacterial 41.3 1.6E+02 0.0056 24.9 13.4 95 229-327 28-129 (361)
156 2hes_X YDR267CP; beta-propelle 40.9 1.6E+02 0.0055 24.7 9.8 70 262-333 118-190 (330)
157 3hxj_A Pyrrolo-quinoline quino 40.8 1.6E+02 0.0053 24.5 9.4 29 216-248 147-175 (330)
158 3mkq_A Coatomer beta'-subunit; 40.2 2.6E+02 0.0089 26.9 20.0 98 230-332 119-222 (814)
159 3sov_A LRP-6, low-density lipo 39.6 1.8E+02 0.0061 24.8 11.8 108 215-333 89-203 (318)
160 2pm7_B Protein transport prote 39.0 1.6E+02 0.0056 24.2 11.1 64 263-328 67-133 (297)
161 2dk7_A Transcription elongatio 38.1 29 0.00098 22.7 3.0 20 312-331 24-43 (73)
162 3no2_A Uncharacterized protein 37.0 1.8E+02 0.0061 24.0 13.1 140 181-336 17-164 (276)
163 1ijq_A LDL receptor, low-densi 37.0 1.9E+02 0.0065 24.4 19.5 108 215-333 87-201 (316)
164 3v64_C Agrin; beta propeller, 36.9 2E+02 0.0069 24.7 23.2 195 101-334 81-283 (349)
165 1egx_A VAsp, vasodilator-stimu 36.8 50 0.0017 23.7 4.5 44 116-167 12-55 (115)
166 4gqb_B Methylosome protein 50; 36.7 2E+02 0.0068 24.6 12.5 61 273-333 101-164 (344)
167 3sov_A LRP-6, low-density lipo 36.6 2E+02 0.0068 24.5 20.7 108 216-333 133-245 (318)
168 3vl1_A 26S proteasome regulato 36.4 2.1E+02 0.0071 24.7 22.6 68 262-333 258-330 (420)
169 1evh_A WH1 domain, protein (ME 35.8 57 0.002 23.3 4.7 41 116-165 12-52 (112)
170 3gre_A Serine/threonine-protei 35.6 2.2E+02 0.0076 24.8 10.2 99 230-333 192-298 (437)
171 2kwv_A RAD30 homolog B, DNA po 35.5 18 0.00061 21.1 1.5 16 5-20 22-37 (48)
172 3ei3_B DNA damage-binding prot 35.1 2.1E+02 0.0072 24.4 18.8 93 230-327 141-236 (383)
173 4a2l_A BT_4663, two-component 34.6 3.3E+02 0.011 26.5 20.7 143 182-333 238-392 (795)
174 2fp8_A Strictosidine synthase; 34.4 2E+02 0.007 24.0 14.3 53 230-284 260-313 (322)
175 3amr_A 3-phytase; beta-propell 34.3 2.4E+02 0.0082 24.7 14.8 164 106-294 88-274 (355)
176 1i2h_A PSD-ZIP45(homer-1C/VESL 34.1 55 0.0019 25.3 4.6 39 116-165 17-56 (168)
177 3c75_H MADH, methylamine dehyd 33.8 2.6E+02 0.009 25.1 12.0 103 230-333 286-408 (426)
178 3mbr_X Glutamine cyclotransfer 32.7 2.1E+02 0.0071 23.6 19.7 135 178-333 44-185 (243)
179 3s94_A LRP-6, low-density lipo 32.7 3.3E+02 0.011 25.8 21.2 195 100-333 356-557 (619)
180 3azo_A Aminopeptidase; POP fam 32.6 3.1E+02 0.011 25.6 20.0 111 215-333 251-375 (662)
181 2pbi_B Guanine nucleotide-bind 32.5 2.3E+02 0.008 24.1 19.4 89 230-324 262-354 (354)
182 3p5b_L Low density lipoprotein 32.4 2.6E+02 0.0089 24.6 22.9 211 101-348 120-343 (400)
183 4a2l_A BT_4663, two-component 32.2 3.6E+02 0.012 26.2 23.5 139 183-330 381-529 (795)
184 3nok_A Glutaminyl cyclase; bet 32.1 2.3E+02 0.0077 23.8 14.9 108 213-333 102-216 (268)
185 2ynn_A Coatomer subunit beta'; 31.3 2.2E+02 0.0076 23.5 10.5 67 262-332 24-91 (304)
186 3v7d_B Cell division control p 31.2 2.7E+02 0.0093 24.4 22.4 95 230-333 332-427 (464)
187 3zwl_B Eukaryotic translation 31.1 2.3E+02 0.0079 23.6 23.0 68 262-333 186-255 (369)
188 1r5m_A SIR4-interacting protei 30.3 2.6E+02 0.0088 23.9 23.5 97 230-333 227-325 (425)
189 2iwa_A Glutamine cyclotransfer 30.2 2.4E+02 0.0081 23.5 17.6 133 181-333 46-187 (266)
190 4h5i_A Guanine nucleotide-exch 30.2 2.6E+02 0.0089 23.9 14.0 101 231-332 198-305 (365)
191 3u4y_A Uncharacterized protein 30.1 2.3E+02 0.008 23.3 20.5 110 215-333 185-310 (331)
192 3gre_A Serine/threonine-protei 30.1 2.7E+02 0.0094 24.2 10.3 69 262-332 181-250 (437)
193 3bg1_A Protein SEC13 homolog; 29.9 2.4E+02 0.0082 23.4 9.6 68 262-331 24-94 (316)
194 2z3z_A Dipeptidyl aminopeptida 29.4 3.7E+02 0.013 25.4 18.2 191 115-331 235-439 (706)
195 1qks_A Cytochrome CD1 nitrite 28.9 3.6E+02 0.012 25.2 20.1 194 104-333 166-379 (567)
196 1got_B GT-beta; complex (GTP-b 28.7 2.6E+02 0.0089 23.5 20.0 95 230-332 206-306 (340)
197 1jmx_B Amine dehydrogenase; ox 28.0 2.6E+02 0.0088 23.1 10.0 68 262-332 10-79 (349)
198 1yfq_A Cell cycle arrest prote 27.6 2.6E+02 0.0089 23.1 20.5 100 230-333 170-288 (342)
199 2oiz_A Aromatic amine dehydrog 27.1 3E+02 0.01 23.6 12.7 55 277-333 286-340 (361)
200 3c5m_A Oligogalacturonate lyas 27.1 2.9E+02 0.0098 23.4 11.6 140 180-333 169-335 (396)
201 2ghs_A AGR_C_1268P; regucalcin 26.6 2.9E+02 0.0098 23.2 21.1 210 101-345 57-278 (326)
202 3p5b_L Low density lipoprotein 26.5 3.3E+02 0.011 23.9 16.4 51 216-270 257-308 (400)
203 3s94_A LRP-6, low-density lipo 26.1 4.2E+02 0.014 25.0 20.4 109 215-333 402-516 (619)
204 4ery_A WD repeat-containing pr 25.7 2.8E+02 0.0094 22.7 20.9 97 230-333 129-229 (312)
205 2xzm_R RACK1; ribosome, transl 24.8 3.1E+02 0.011 23.0 11.2 68 262-331 38-111 (343)
206 1erj_A Transcriptional repress 24.5 3.4E+02 0.012 23.4 24.2 197 100-332 130-346 (393)
207 3ow8_A WD repeat-containing pr 24.1 3.1E+02 0.011 22.8 22.3 97 230-333 186-285 (321)
208 4h5i_A Guanine nucleotide-exch 23.3 3.5E+02 0.012 23.1 9.2 67 262-331 144-210 (365)
209 1k32_A Tricorn protease; prote 23.1 5.9E+02 0.02 25.6 16.0 36 301-336 611-648 (1045)
210 2ysi_A Transcription elongatio 22.8 65 0.0022 18.1 2.4 17 315-331 17-33 (40)
211 1got_B GT-beta; complex (GTP-b 22.5 3.4E+02 0.012 22.7 20.9 95 230-331 164-261 (340)
212 2jp2_A Spred-2, sprouty-relate 22.2 75 0.0026 23.2 3.3 40 116-165 21-65 (126)
213 4g56_B MGC81050 protein; prote 22.0 3.7E+02 0.013 22.8 18.9 91 230-328 249-344 (357)
214 3dm0_A Maltose-binding peripla 21.8 5.1E+02 0.017 24.4 20.5 200 98-332 435-637 (694)
215 2be1_A Serine/threonine-protei 20.7 4.1E+02 0.014 23.0 8.9 27 307-333 110-136 (339)
216 1e0n_A Hypothetical protein; Y 20.4 89 0.003 15.8 2.4 17 315-331 7-23 (27)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.24 E-value=5.2e-09 Score=93.27 Aligned_cols=193 Identities=9% Similarity=-0.015 Sum_probs=124.7
Q ss_pred EEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCceeeccc
Q 037345 117 ISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDSWRYLKA 196 (357)
Q Consensus 117 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~~ 196 (357)
++++||.|++|..+|+.|..+.. ...... .+ +++.+..............++ +|+..+++|+.++.
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~--------~~~~~~--~~--~lyv~GG~~~~~~~~~~~~~~--~~d~~~~~W~~~~~ 134 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCL--------FGLGEA--LN--SIYVVGGREIKDGERCLDSVM--CYDRLSFKWGESDP 134 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEES--------CEEEEE--TT--EEEEECCEESSTTCCBCCCEE--EEETTTTEEEECCC
T ss_pred eEEecCCCCeEEECCCCCcchhc--------eeEEEE--CC--EEEEEeCCcCCCCCcccceEE--EECCCCCcEeECCC
Confidence 78999999999999987753221 111111 11 344443322101112334566 99999999999875
Q ss_pred CCcccccccCCCCCcceEECceEEEEEccCC---CcCEEEEEECCCcceeEec-CCCCCCCCCCeEEEECCeEEEEEecC
Q 037345 197 NELSDYSFLGGQQSENTYLDRICYWIAWRYN---NCQEILSFHMRDEAFHVIK-CPDNSYFPNPILGVYDNSLHFLDFDR 272 (357)
Q Consensus 197 ~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~---~~~~i~~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~l~~~~~ 272 (357)
.+. +... ...+.++|.+|.+.+... ....+..||+.+++|+.++ +|.. ......+..+|+|+++....
T Consensus 135 ~p~-~r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~ 206 (315)
T 4asc_A 135 LPY-VVYG-----HTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTA--RSLFGATVHDGRIIVAAGVT 206 (315)
T ss_dssp CSS-CCBS-----CEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSC--CBSCEEEEETTEEEEEEEEC
T ss_pred CCC-cccc-----eeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCc--hhceEEEEECCEEEEEeccC
Confidence 433 2111 567789999999987521 2357999999999999875 4433 23346778899999998754
Q ss_pred CC-CeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEeeC---------------CeEEEEECCCCcEEEe
Q 037345 273 SE-SCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESNT---------------NQLLLYDPNTRALRDV 333 (357)
Q Consensus 273 ~~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~---------------~~~~~yd~~t~~~~~v 333 (357)
.. ..-.+|.++- .+|.....++. .......+..++.++++... ..+..||+++++|+++
T Consensus 207 ~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 207 DTGLTSSAEVYSITDNKWAPFEAFPQ--ERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp SSSEEEEEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred CCCccceEEEEECCCCeEEECCCCCC--cccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 32 3446788776 89998754432 12222223346677776431 3588999999999999
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.18 E-value=4.2e-09 Score=93.37 Aligned_cols=208 Identities=8% Similarity=-0.034 Sum_probs=132.0
Q ss_pred EecccceEEEeecC----CCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCC
Q 037345 100 LGNCNGLFCLHDKN----SNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKD 175 (357)
Q Consensus 100 ~~s~~GLll~~~~~----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~ 175 (357)
....+|.|.+..+. ...+.++||.|++|..+|+.+.....+ ....++ + +++.+...... ...
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-------~~~~~~---~--~iyv~GG~~~~--~~~ 116 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-------AACAAE---G--KIYTSGGSEVG--NSA 116 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-------EEEEET---T--EEEEECCBBTT--BSC
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-------eEEEEC---C--EEEEECCCCCC--CcE
Confidence 33456766655432 246799999999999998877543221 111222 1 34444322211 112
Q ss_pred CcceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCCC------cCEEEEEECCCcceeEec-CC
Q 037345 176 SVSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNN------CQEILSFHMRDEAFHVIK-CP 248 (357)
Q Consensus 176 ~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~------~~~i~~fD~~~e~~~~i~-lP 248 (357)
...++ +|+..+++|+.++..+. +... ...+.++|.+|.+.+.... ...+..||+.+++|+.++ +|
T Consensus 117 ~~~~~--~~d~~~~~W~~~~~~p~-~r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p 188 (306)
T 3ii7_A 117 LYLFE--CYDTRTESWHTKPSMLT-QRCS-----HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMI 188 (306)
T ss_dssp CCCEE--EEETTTTEEEEECCCSS-CCBS-----CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCS
T ss_pred eeeEE--EEeCCCCceEeCCCCcC-Ccce-----eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCcc
Confidence 34566 99999999999865433 2211 5667889999999864321 457899999999999885 44
Q ss_pred CCCCCCCCeEEEECCeEEEEEecCCC-CeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee------CCe
Q 037345 249 DNSYFPNPILGVYDNSLHFLDFDRSE-SCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN------TNQ 319 (357)
Q Consensus 249 ~~~~~~~~~l~~~~g~L~l~~~~~~~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~------~~~ 319 (357)
.. .....++..+|+|+++...... ..-.+|.++- .+|.....++. .......+..++.||++.. ...
T Consensus 189 ~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 264 (306)
T 3ii7_A 189 EA--RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW--KGVTVKCAAVGSIVYVLAGFQGVGRLGH 264 (306)
T ss_dssp SC--CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC--CBSCCEEEEETTEEEEEECBCSSSBCCE
T ss_pred ch--hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC--CccceeEEEECCEEEEEeCcCCCeeeee
Confidence 33 2335677889999998764221 2235666665 89998754432 1222222333677887753 257
Q ss_pred EEEEECCCCcEEEe
Q 037345 320 LLLYDPNTRALRDV 333 (357)
Q Consensus 320 ~~~yd~~t~~~~~v 333 (357)
+..||+++++|+.+
T Consensus 265 ~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 265 ILEYNTETDKWVAN 278 (306)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEcCCCCeEEeC
Confidence 99999999999998
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.15 E-value=2e-08 Score=89.56 Aligned_cols=210 Identities=7% Similarity=0.028 Sum_probs=131.6
Q ss_pred EEecccceEEEeecC-----------CCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEe
Q 037345 99 LLGNCNGLFCLHDKN-----------SNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNL 167 (357)
Q Consensus 99 ~~~s~~GLll~~~~~-----------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~ 167 (357)
.+...+|.|.+..+. ...++++||.|++|..+|+.+.....+ +.... .+ +++.+...
T Consensus 51 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~--------~~~~~--~~--~iyv~GG~ 118 (318)
T 2woz_A 51 SIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF--------GLGEV--DD--KIYVVAGK 118 (318)
T ss_dssp EEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC--------EEEEE--TT--EEEEEEEE
T ss_pred EEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc--------ceEEE--CC--EEEEEcCc
Confidence 345566766655431 112789999999999998877643221 12111 12 34444332
Q ss_pred cCCCCCCCCcceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCC---CcCEEEEEECCCcceeE
Q 037345 168 TDDNTRKDSVSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYN---NCQEILSFHMRDEAFHV 244 (357)
Q Consensus 168 ~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~---~~~~i~~fD~~~e~~~~ 244 (357)
.... ......++ +|+..+++|+.++..+. +... ...+.++|.+|.+.+... ....+..||+.+++|+.
T Consensus 119 ~~~~-~~~~~~~~--~yd~~~~~W~~~~~~p~-~r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~ 189 (318)
T 2woz_A 119 DLQT-EASLDSVL--CYDPVAAKWSEVKNLPI-KVYG-----HNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKD 189 (318)
T ss_dssp BTTT-CCEEEEEE--EEETTTTEEEEECCCSS-CEES-----CEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEE
T ss_pred cCCC-CcccceEE--EEeCCCCCEeECCCCCC-cccc-----cEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEE
Confidence 2110 01123455 99999999999875433 2211 556779999999876421 23469999999999998
Q ss_pred ec-CCCCCCCCCCeEEEECCeEEEEEecCCC-CeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee----
Q 037345 245 IK-CPDNSYFPNPILGVYDNSLHFLDFDRSE-SCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN---- 316 (357)
Q Consensus 245 i~-lP~~~~~~~~~l~~~~g~L~l~~~~~~~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~---- 316 (357)
++ +|... .....+..+|+|+++...... ..-.+|.++- .+|.+...++.. ......+..++.||++..
T Consensus 190 ~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~ 265 (318)
T 2woz_A 190 LAPMKTPR--SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQE--RSSISLVSLAGSLYAIGGFAMI 265 (318)
T ss_dssp ECCCSSCC--BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSC--CBSCEEEEETTEEEEECCBCCB
T ss_pred CCCCCCCc--ccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCc--ccceEEEEECCEEEEECCeecc
Confidence 85 44332 234667889999999864322 2346777775 889987554322 122222334677877632
Q ss_pred -----------CCeEEEEECCCCcEEEe
Q 037345 317 -----------TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 317 -----------~~~~~~yd~~t~~~~~v 333 (357)
...+..||+++++|+++
T Consensus 266 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 266 QLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp C----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCCceeccceeeeEEEEeCCCCEehhh
Confidence 24689999999999999
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.15 E-value=1.7e-08 Score=89.65 Aligned_cols=207 Identities=13% Similarity=0.043 Sum_probs=130.9
Q ss_pred ecccceEEEeecC---------CCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCC
Q 037345 101 GNCNGLFCLHDKN---------SNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDN 171 (357)
Q Consensus 101 ~s~~GLll~~~~~---------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~ 171 (357)
...+|.|.+..+. ...+.++||.|++|..+|+.+...... ....++ + +++.+......
T Consensus 67 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-------~~~~~~---~--~iyv~GG~~~~- 133 (308)
T 1zgk_A 67 CVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI-------GVGVID---G--HIYAVGGSHGC- 133 (308)
T ss_dssp EEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC-------EEEEET---T--EEEEECCEETT-
T ss_pred EEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc-------EEEEEC---C--EEEEEcCCCCC-
Confidence 3446666655332 235799999999999999877543221 111222 1 34444222211
Q ss_pred CCCCCcceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCC--CcCEEEEEECCCcceeEec-CC
Q 037345 172 TRKDSVSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYN--NCQEILSFHMRDEAFHVIK-CP 248 (357)
Q Consensus 172 ~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~i~~fD~~~e~~~~i~-lP 248 (357)
.....++ +|+..+++|+.++..+. +... ...+.++|.+|.+.+... ....+..||+.+++|+.++ +|
T Consensus 134 --~~~~~~~--~yd~~~~~W~~~~~~p~-~r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 203 (308)
T 1zgk_A 134 --IHHNSVE--RYEPERDEWHLVAPMLT-RRIG-----VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMN 203 (308)
T ss_dssp --EECCCEE--EEETTTTEEEECCCCSS-CCBS-----CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCS
T ss_pred --cccccEE--EECCCCCeEeECCCCCc-cccc-----eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCC
Confidence 1123566 99999999999875432 1111 566788999999976532 1357999999999999875 34
Q ss_pred CCCCCCCCeEEEECCeEEEEEecCC-CCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee------CCe
Q 037345 249 DNSYFPNPILGVYDNSLHFLDFDRS-ESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN------TNQ 319 (357)
Q Consensus 249 ~~~~~~~~~l~~~~g~L~l~~~~~~-~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~------~~~ 319 (357)
.. ......+..+|+|+++..... ...-++|.++- .+|.+...++.. ......+..++.||++.. ...
T Consensus 204 ~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~ 279 (308)
T 1zgk_A 204 TI--RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR--RSALGITVHQGRIYVLGGYDGHTFLDS 279 (308)
T ss_dssp SC--CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC--CBSCEEEEETTEEEEECCBCSSCBCCE
T ss_pred Cc--cccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC--ccceEEEEECCEEEEEcCcCCCcccce
Confidence 33 223466778999999886432 22345666664 899987644321 222222334678888743 357
Q ss_pred EEEEECCCCcEEEee
Q 037345 320 LLLYDPNTRALRDVG 334 (357)
Q Consensus 320 ~~~yd~~t~~~~~v~ 334 (357)
+..||+++++|+++.
T Consensus 280 v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 280 VECYDPDTDTWSEVT 294 (308)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEeecC
Confidence 999999999999993
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.13 E-value=2.4e-08 Score=88.23 Aligned_cols=207 Identities=9% Similarity=0.029 Sum_probs=130.8
Q ss_pred EecccceEEEeecC-----CCeEEEEeccccc---hhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCC
Q 037345 100 LGNCNGLFCLHDKN-----SNRISIWNLATRE---FRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDN 171 (357)
Q Consensus 100 ~~s~~GLll~~~~~-----~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~ 171 (357)
....+|.+.+..+. ...++++||.|++ |..+++.+.....+ ....++ + +++.+......
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-------~~~~~~---~--~lyv~GG~~~~- 124 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA-------GATTLG---D--MIYVSGGFDGS- 124 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC-------EEEEET---T--EEEEECCBCSS-
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce-------eEEEEC---C--EEEEEcccCCC-
Confidence 33456666555431 2468999999999 99998877543221 111222 1 34444322221
Q ss_pred CCCCCcceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCC--CcCEEEEEECCCcceeEec-CC
Q 037345 172 TRKDSVSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYN--NCQEILSFHMRDEAFHVIK-CP 248 (357)
Q Consensus 172 ~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~i~~fD~~~e~~~~i~-lP 248 (357)
.....++ +|+..+++|+.++..+. +... ...+.++|.+|.+.+... ....+..||+.+++|+.++ +|
T Consensus 125 --~~~~~~~--~~d~~~~~W~~~~~~p~-~r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p 194 (301)
T 2vpj_A 125 --RRHTSME--RYDPNIDQWSMLGDMQT-AREG-----AGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMA 194 (301)
T ss_dssp --CBCCEEE--EEETTTTEEEEEEECSS-CCBS-----CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCS
T ss_pred --cccceEE--EEcCCCCeEEECCCCCC-Cccc-----ceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCC
Confidence 1233556 99999999999865432 1111 556788999999976532 2357999999999999884 44
Q ss_pred CCCCCCCCeEEEECCeEEEEEecCCC-CeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee-C-----Ce
Q 037345 249 DNSYFPNPILGVYDNSLHFLDFDRSE-SCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN-T-----NQ 319 (357)
Q Consensus 249 ~~~~~~~~~l~~~~g~L~l~~~~~~~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-~-----~~ 319 (357)
.. .....++..+|+|+++...... ..-++|.++- .+|.+...++.. ......+..++.||+... + ..
T Consensus 195 ~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~ 270 (301)
T 2vpj_A 195 TK--RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP--RCYVGATVLRGRLYAIAGYDGNSLLSS 270 (301)
T ss_dssp SC--CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCBCSSSBEEE
T ss_pred cc--cccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc--ccceeEEEECCEEEEEcCcCCCccccc
Confidence 33 2334677889999998865322 1334666654 899987544322 122222334677887753 1 46
Q ss_pred EEEEECCCCcEEEe
Q 037345 320 LLLYDPNTRALRDV 333 (357)
Q Consensus 320 ~~~yd~~t~~~~~v 333 (357)
+..||+++++|+.+
T Consensus 271 v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 271 IECYDPIIDSWEVV 284 (301)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEcCCCCeEEEc
Confidence 89999999999998
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.13 E-value=2e-08 Score=88.75 Aligned_cols=207 Identities=11% Similarity=0.091 Sum_probs=131.2
Q ss_pred ecccceEEEeecC-----CCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCC
Q 037345 101 GNCNGLFCLHDKN-----SNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKD 175 (357)
Q Consensus 101 ~s~~GLll~~~~~-----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~ 175 (357)
...+|.|.+..+. ...+.++||.|++|..+|+.+.....+ ....++ + +++.+...... ..
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-------~~~~~~---~--~iyv~GG~~~~---~~ 122 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL-------GAAVLN---G--LLYAVGGFDGS---TG 122 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-------EEEEET---T--EEEEEEEECSS---CE
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce-------EEEEEC---C--EEEEEcCCCCC---cc
Confidence 3446666655431 246799999999999999877543221 111122 2 33443332221 11
Q ss_pred CcceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCCC----cCEEEEEECCCcceeEec-CCCC
Q 037345 176 SVSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNN----CQEILSFHMRDEAFHVIK-CPDN 250 (357)
Q Consensus 176 ~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~----~~~i~~fD~~~e~~~~i~-lP~~ 250 (357)
...++ +|+..+++|+.++..+. +... ...+.++|.+|.+.+.... ...+..||+.+++|+.++ +|..
T Consensus 123 ~~~~~--~~d~~~~~W~~~~~~p~-~r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 194 (302)
T 2xn4_A 123 LSSVE--AYNIKSNEWFHVAPMNT-RRSS-----VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR 194 (302)
T ss_dssp EEEEE--EEETTTTEEEEECCCSS-CCBS-----CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC
T ss_pred CceEE--EEeCCCCeEeecCCCCC-cccC-----ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc
Confidence 23455 99999999999875432 2111 4567889999998764321 346899999999999884 4433
Q ss_pred CCCCCCeEEEECCeEEEEEecCCC-CeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee------CCeEE
Q 037345 251 SYFPNPILGVYDNSLHFLDFDRSE-SCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN------TNQLL 321 (357)
Q Consensus 251 ~~~~~~~l~~~~g~L~l~~~~~~~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~------~~~~~ 321 (357)
. ....++..+|+|+++...... ..-++|.++- ..|.....++.. ......+..++.||++.. ...+.
T Consensus 195 r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~v~ 270 (302)
T 2xn4_A 195 R--SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC--RRNAGVCAVNGLLYVVGGDDGSCNLASVE 270 (302)
T ss_dssp C--BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCBCSSSBCCCEE
T ss_pred c--ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc--cccCeEEEECCEEEEECCcCCCcccccEE
Confidence 2 234677889999999865322 2235677765 899987644322 122222334678888753 24599
Q ss_pred EEECCCCcEEEee
Q 037345 322 LYDPNTRALRDVG 334 (357)
Q Consensus 322 ~yd~~t~~~~~v~ 334 (357)
.||+++++|+.+.
T Consensus 271 ~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 271 YYNPTTDKWTVVS 283 (302)
T ss_dssp EEETTTTEEEECS
T ss_pred EEcCCCCeEEECC
Confidence 9999999999984
No 7
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.11 E-value=4.1e-11 Score=76.69 Aligned_cols=42 Identities=29% Similarity=0.523 Sum_probs=38.2
Q ss_pred CCCCCCcHHHHHHHHhcCCccccchhhcchHhHHhhcCChHH
Q 037345 2 TSNDDFSEDLLIEILSRLPVKSLMRYKFVCRFWCALIKSPRF 43 (357)
Q Consensus 2 ~~~~~LP~Dll~~IL~rLP~~sl~r~r~VcK~W~~li~~p~F 43 (357)
..+..||+|++.+||++||++++.++++|||+|+.++.++.|
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 356799999999999999999999999999999999998876
No 8
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.11 E-value=3.8e-11 Score=104.20 Aligned_cols=51 Identities=22% Similarity=0.421 Sum_probs=47.6
Q ss_pred CCCCCCCcHHHHHHHHhcCCccccc-hhhcchHhHHhhcCChHHHHHHhhcC
Q 037345 1 MTSNDDFSEDLLIEILSRLPVKSLM-RYKFVCRFWCALIKSPRFVSRHIINY 51 (357)
Q Consensus 1 m~~~~~LP~Dll~~IL~rLP~~sl~-r~r~VcK~W~~li~~p~F~~~~~~~~ 51 (357)
|+.+..||+||+.+||+|||+++|+ ||++|||+|++++++|.|.+.++.+.
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 4567899999999999999999999 99999999999999999999988765
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.03 E-value=6.1e-08 Score=85.83 Aligned_cols=191 Identities=9% Similarity=-0.035 Sum_probs=123.4
Q ss_pred CeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCceeec
Q 037345 115 NRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDSWRYL 194 (357)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 194 (357)
..+.++||.|++|..+++.+.....+ ....++ + +++.+..... .....++ +|+..+++|+.+
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~-------~~~~~~---~--~lyv~GG~~~----~~~~~~~--~~d~~~~~W~~~ 85 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDA-------ACVFWD---N--VVYILGGSQL----FPIKRMD--CYNVVKDSWYSK 85 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSC-------EEEEET---T--EEEEECCBSS----SBCCEEE--EEETTTTEEEEE
T ss_pred ceEEEecCCCCCEecCCCCCccccee-------EEEEEC---C--EEEEEeCCCC----CCcceEE--EEeCCCCeEEEC
Confidence 46799999999999998877543221 111122 1 2333322221 1233555 999999999988
Q ss_pred ccCCcccccccCCCCCcceEECceEEEEEccC-C--CcCEEEEEECCCcceeEec-CCCCCCCCCCeEEEECCeEEEEEe
Q 037345 195 KANELSDYSFLGGQQSENTYLDRICYWIAWRY-N--NCQEILSFHMRDEAFHVIK-CPDNSYFPNPILGVYDNSLHFLDF 270 (357)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~-~--~~~~i~~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~l~~~ 270 (357)
+..+. +... ...+.++|.+|.+.+.. . ....+..||+.+.+|+.++ +|... .....+..+|+|+++..
T Consensus 86 ~~~p~-~r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG 157 (306)
T 3ii7_A 86 LGPPT-PRDS-----LAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR--CSHGMVEANGLIYVCGG 157 (306)
T ss_dssp ECCSS-CCBS-----CEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECC
T ss_pred CCCCc-cccc-----eeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc--ceeEEEEECCEEEEECC
Confidence 65432 2211 55678899999998653 1 2357999999999999884 44332 33466788999999876
Q ss_pred cCCC-C----eEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee------CCeEEEEECCCCcEEEe
Q 037345 271 DRSE-S----CFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN------TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 271 ~~~~-~----~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~v 333 (357)
.... . .-.+|.++- .+|.+...++. .......+..++.||++.. ...+..||+++++|+++
T Consensus 158 ~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 231 (306)
T 3ii7_A 158 SLGNNVSGRVLNSCEVYDPATETWTELCPMIE--ARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV 231 (306)
T ss_dssp EESCTTTCEECCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEEC
T ss_pred CCCCCCcccccceEEEeCCCCCeEEECCCccc--hhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC
Confidence 4211 1 345666665 89998764432 2222333334677887743 25699999999999999
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.00 E-value=1.3e-07 Score=83.52 Aligned_cols=193 Identities=13% Similarity=0.112 Sum_probs=123.9
Q ss_pred CeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCc---e
Q 037345 115 NRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDS---W 191 (357)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~---W 191 (357)
..++++||.|++|..+|+.+.....+ .....+ + +++.+...... .....++ +|+..+++ |
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~-------~~~~~~---~--~l~v~GG~~~~---~~~~~~~--~~d~~~~~~~~W 93 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYV-------ASVSLH---D--RIYVIGGYDGR---SRLSSVE--CLDYTADEDGVW 93 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-------EEEEET---T--EEEEECCBCSS---CBCCCEE--EEETTCCTTCCC
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccc-------cEEEEC---C--EEEEEcCCCCC---ccCceEE--EEECCCCCCCee
Confidence 36799999999999999776532211 111222 1 34443322211 1233555 99999999 9
Q ss_pred eecccCCcccccccCCCCCcceEECceEEEEEccCC--CcCEEEEEECCCcceeEec-CCCCCCCCCCeEEEECCeEEEE
Q 037345 192 RYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYN--NCQEILSFHMRDEAFHVIK-CPDNSYFPNPILGVYDNSLHFL 268 (357)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~i~~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~l~ 268 (357)
+.++..+. +... ...+.++|.+|.+.+... ....+..||+.+.+|+.++ +|... .....+..+|+|+++
T Consensus 94 ~~~~~~p~-~r~~-----~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~ 165 (301)
T 2vpj_A 94 YSVAPMNV-RRGL-----AGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR--EGAGLVVASGVIYCL 165 (301)
T ss_dssp EEECCCSS-CCBS-----CEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC--BSCEEEEETTEEEEE
T ss_pred EECCCCCC-Cccc-----eeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc--ccceEEEECCEEEEE
Confidence 99865432 2211 556778999999976542 2347999999999999874 45332 234667789999998
Q ss_pred EecCC-CCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee------CCeEEEEECCCCcEEEee
Q 037345 269 DFDRS-ESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN------TNQLLLYDPNTRALRDVG 334 (357)
Q Consensus 269 ~~~~~-~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~v~ 334 (357)
..... ...-.+|.++- .+|.+...++. .......+..++.||++.. ...+..||+++++|+++.
T Consensus 166 GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPHTGHWTNVTPMAT--KRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCCCCCcccceEEEEeCCCCcEEeCCCCCc--ccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 76432 22345666665 99998754432 2222233334678888753 246999999999999994
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.98 E-value=3.1e-08 Score=89.73 Aligned_cols=214 Identities=11% Similarity=0.060 Sum_probs=126.8
Q ss_pred ecccceEEEeec-CCCeEEEEecc--ccchhcCCCCC-CCCCCccccccceeEEeeeCCCCCeEEEEEEEe-c-CCCCCC
Q 037345 101 GNCNGLFCLHDK-NSNRISIWNLA--TREFRALPKWK-GEIPRHKWVYQLNFGFELDSSSNDYKIIFILNL-T-DDNTRK 174 (357)
Q Consensus 101 ~s~~GLll~~~~-~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~-~-~~~~~~ 174 (357)
...+|.|.+..+ ....++++||. +++|..+|+.| ..+..+ ....++ + +++.+... . ......
T Consensus 16 ~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~-------~~~~~~---~--~lyv~GG~~~~~~~~~~ 83 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA-------TSAFID---G--NLYVFGGIGKNSEGLTQ 83 (357)
T ss_dssp EEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC-------EEEEET---T--EEEEECCEEECTTSCEE
T ss_pred EEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc-------eEEEEC---C--EEEEEcCCCCCCCccce
Confidence 334677766543 23468999998 49999998877 332211 112222 2 33333222 1 000011
Q ss_pred CCcceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCCC--------------------------
Q 037345 175 DSVSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNN-------------------------- 228 (357)
Q Consensus 175 ~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~-------------------------- 228 (357)
....++ +|+..+++|+.++..++ .+. . ...++..+|.+|.+.+....
T Consensus 84 ~~~~v~--~yd~~~~~W~~~~~~~p--~~r--~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 84 VFNDVH--KYNPKTNSWVKLMSHAP--MGM--A-GHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp ECCCEE--EEETTTTEEEECSCCCS--SCC--S-SEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eeccEE--EEeCCCCcEEECCCCCC--ccc--c-cceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 233556 99999999999875431 111 1 13456799999999865311
Q ss_pred ----------cCEEEEEECCCcceeEec-CCCCCCCCCCeEEEECCeEEEEEecCC--CCeEEEEEEc---C-CeeEEEE
Q 037345 229 ----------CQEILSFHMRDEAFHVIK-CPDNSYFPNPILGVYDNSLHFLDFDRS--ESCFEKWVMK---E-GSWTKQL 291 (357)
Q Consensus 229 ----------~~~i~~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~l~~~~~~--~~~~~iW~l~---~-~~W~~~~ 291 (357)
...+..||+.+++|+.+. +|... .....++..+|+|+++..... ...-++|.++ + ..|.+..
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~ 235 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYG-TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA 235 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCC-CBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECC
T ss_pred ccccccccCCcccEEEEeCCCCcEEECCCCCCCC-cccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecC
Confidence 258999999999999874 55432 122467788999999875321 1234566664 2 8999876
Q ss_pred EEccCCceeEEEEEeeCCcEEEEeeC-----------------------CeEEEEECCCCcEEEee
Q 037345 292 SVGPILGVLRALEFWKNGSFFIESNT-----------------------NQLLLYDPNTRALRDVG 334 (357)
Q Consensus 292 ~i~~~~~~~~~~~~~~~~~i~~~~~~-----------------------~~~~~yd~~t~~~~~v~ 334 (357)
.++..........+..++.||++... ..+..||+++++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 236 PVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp CSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred CCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 55322222233334456788887531 25789999999999993
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.96 E-value=2.1e-07 Score=82.72 Aligned_cols=199 Identities=9% Similarity=0.044 Sum_probs=121.2
Q ss_pred eEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCceeecc
Q 037345 116 RISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDSWRYLK 195 (357)
Q Consensus 116 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 195 (357)
.+.++||.|++|.. ++.+....+. ...... ..+...|+.-....... ........+.+|+..+++|+.++
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~r~------~~~~~~--~~~~iyv~GG~~~~~~~-~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVPKN------HVSLVT--KENQVFVAGGLFYNEDN-KEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSCSS------EEEEEC--TTCCEEEEEEEEECSSC-SSSCEEEEEEEEETTTTEEEECC
T ss_pred ceEEECCCCCeEec-CCCCCCCCcc------ceEEEE--ECCEEEEEcCcccCCCC-CccccccceEEecCCCCeEEECC
Confidence 57999999999986 3332211111 122221 22333333322111110 01122222449999999999886
Q ss_pred cCCcccccccCCCCCcceEECceEEEEEccC-----CCcCEEEEEECCCcceeEec-CCCCCCCCCCeEEEECCeEEEEE
Q 037345 196 ANELSDYSFLGGQQSENTYLDRICYWIAWRY-----NNCQEILSFHMRDEAFHVIK-CPDNSYFPNPILGVYDNSLHFLD 269 (357)
Q Consensus 196 ~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~-----~~~~~i~~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~l~~ 269 (357)
..+. +... ...+.++|.+|.+.+.. .....+..||+.+.+|+.++ +|... .....+..+|+|+++.
T Consensus 84 ~~p~-~r~~-----~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~G 155 (315)
T 4asc_A 84 PLPS-PRCL-----FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV--YGHTVLSHMDLVYVIG 155 (315)
T ss_dssp CBSS-CEES-----CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEEC
T ss_pred CCCc-chhc-----eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc--cceeEEEECCEEEEEe
Confidence 5432 2211 56678899999998732 13457899999999999874 44432 3346778899999998
Q ss_pred ecC--CCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee------CCeEEEEECCCCcEEEee
Q 037345 270 FDR--SESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN------TNQLLLYDPNTRALRDVG 334 (357)
Q Consensus 270 ~~~--~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~v~ 334 (357)
... ....-++|.++- .+|.+...++. ......++..++.||+... ...+..||+++++|+++.
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFEWKELAPMQT--ARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred CCCCCCcccceEEEEeCCCCeEEECCCCCC--chhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 752 223345777765 89998754432 2222333334678888753 126899999999999993
No 13
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.93 E-value=3.8e-08 Score=87.32 Aligned_cols=196 Identities=10% Similarity=0.041 Sum_probs=121.8
Q ss_pred CeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecC-CCCCCCCcceEEEEEEcCCCceee
Q 037345 115 NRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTD-DNTRKDSVSTEVILHTLSTDSWRY 193 (357)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~-~~~~~~~~~~~~~vyss~t~~W~~ 193 (357)
..+.++||.|++|..+++.|.....+ ..... .+ +++.+..... .........++ +|+..+++|+.
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~--------~~~~~--~~--~lyv~GG~~~~~~~~~~~~~~~--~~d~~~~~W~~ 104 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGL--------AGCVV--GG--LLYAVGGRNNSPDGNTDSSALD--CYNPMTNQWSP 104 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC--------EEEEE--TT--EEEEECCEEEETTEEEECCCEE--EEETTTTEEEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccc--------eEEEE--CC--EEEEECCCcCCCCCCeecceEE--EECCCCCeEeE
Confidence 45799999999999998776543221 11111 11 2333322100 00001123555 99999999999
Q ss_pred cccCCcccccccCCCCCcceEECceEEEEEccCC--CcCEEEEEECCCcceeEec-CCCCCCCCCCeEEEECCeEEEEEe
Q 037345 194 LKANELSDYSFLGGQQSENTYLDRICYWIAWRYN--NCQEILSFHMRDEAFHVIK-CPDNSYFPNPILGVYDNSLHFLDF 270 (357)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~i~~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~l~~~ 270 (357)
++..+. +... ...+.++|.+|.+.+... ....+..||+.+++|+.++ +|... .....+..+|+|+++..
T Consensus 105 ~~~~p~-~r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG 176 (308)
T 1zgk_A 105 CAPMSV-PRNR-----IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRR--IGVGVAVLNRLLYAVGG 176 (308)
T ss_dssp CCCCSS-CCBT-----CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEECC
T ss_pred CCCCCc-Cccc-----cEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccc--cceEEEEECCEEEEEeC
Confidence 875432 2111 456778999999876432 1346899999999999874 44332 23466778999999886
Q ss_pred cCCC-CeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee------CCeEEEEECCCCcEEEee
Q 037345 271 DRSE-SCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN------TNQLLLYDPNTRALRDVG 334 (357)
Q Consensus 271 ~~~~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~v~ 334 (357)
.... ..-.+|.++- .+|.+...++.. ......+..++.||++.. ...+..||+++++|+++.
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMNTI--RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCSSC--CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCCCc--cccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 5322 2334666664 899987544321 222222334678888753 257999999999999983
No 14
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.92 E-value=1.9e-07 Score=82.42 Aligned_cols=192 Identities=11% Similarity=0.101 Sum_probs=122.3
Q ss_pred eEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCceeecc
Q 037345 116 RISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDSWRYLK 195 (357)
Q Consensus 116 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 195 (357)
.+.++||.+++|..+++.|.....+ . ...++ + +++.+...... .....++ +|+..+++|+.++
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~------~-~~~~~---~--~lyv~GG~~~~---~~~~~~~--~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRA------G-MVYMA---G--LVFAVGGFNGS---LRVRTVD--SYDPVKDQWTSVA 93 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSC------E-EEEET---T--EEEEESCBCSS---SBCCCEE--EEETTTTEEEEEC
T ss_pred cEEEEcCcCCcEeEcccCCcccccc------e-EEEEC---C--EEEEEeCcCCC---ccccceE--EECCCCCceeeCC
Confidence 5689999999999998776533211 1 11111 1 23333222111 1223555 9999999999987
Q ss_pred cCCcccccccCCCCCcceEECceEEEEEccCC--CcCEEEEEECCCcceeEec-CCCCCCCCCCeEEEECCeEEEEEecC
Q 037345 196 ANELSDYSFLGGQQSENTYLDRICYWIAWRYN--NCQEILSFHMRDEAFHVIK-CPDNSYFPNPILGVYDNSLHFLDFDR 272 (357)
Q Consensus 196 ~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~i~~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~l~~~~~ 272 (357)
..+. +... ...+.++|.+|.+.+... ....+..||+.+++|+.++ +|.. ......+..+|+|+++....
T Consensus 94 ~~p~-~r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~ 165 (302)
T 2xn4_A 94 NMRD-RRST-----LGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR--RSSVGVGVVGGLLYAVGGYD 165 (302)
T ss_dssp CCSS-CCBS-----CEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCEE
T ss_pred CCCc-cccc-----eEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc--ccCceEEEECCEEEEEeCCC
Confidence 5432 2111 556778999999986542 1246889999999999885 4433 23346678899999987642
Q ss_pred CCC---eEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee------CCeEEEEECCCCcEEEee
Q 037345 273 SES---CFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN------TNQLLLYDPNTRALRDVG 334 (357)
Q Consensus 273 ~~~---~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~v~ 334 (357)
... .-.+|.++- .+|.+...++. .......+..++.||++.. ...+..||+++++|+++.
T Consensus 166 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 166 VASRQCLSTVECYNATTNEWTYIAEMST--RRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp TTTTEECCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCCCccccEEEEEeCCCCcEEECCCCcc--ccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 211 234666665 89998754432 2222233334678888753 246999999999999993
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.83 E-value=3.8e-07 Score=90.08 Aligned_cols=216 Identities=12% Similarity=0.078 Sum_probs=124.7
Q ss_pred ccceEEEeecC----CCeEEEEeccccchhcCC-CCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCc
Q 037345 103 CNGLFCLHDKN----SNRISIWNLATREFRALP-KWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSV 177 (357)
Q Consensus 103 ~~GLll~~~~~----~~~~~V~NP~T~~~~~LP-~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~ 177 (357)
.+|.|.+..+. ...++++||.|++|..++ +.+....... +...........+ +++.+....... ....
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~---R~~hs~~~~~~~~--~lyv~GG~~~~~--~~~~ 468 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVA---RMCHTFTTISRNN--QLLLIGGRKAPH--QGLS 468 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCC---CBSCEEEEETTTT--EEEEECCBSSTT--CBCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcc---ccceEEEEEccCC--EEEEEcCCCCCC--Cccc
Confidence 56666655431 245799999999999998 5221000000 0011222211011 234433222110 1233
Q ss_pred ceEEEEEEcCCCceeecccCCcccccccCCCCCcceEE-CceEEEEEccCCCcCEEEEEECCCcceeEecC----CCCCC
Q 037345 178 STEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL-DRICYWIAWRYNNCQEILSFHMRDEAFHVIKC----PDNSY 252 (357)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~l----P~~~~ 252 (357)
.++ +|+..+++|+.++..+. +... ..++.+ +|.+|.+.+..... .+..||+.+++|+.++. |...
T Consensus 469 dv~--~yd~~t~~W~~~~~~p~-~R~~-----h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r- 538 (695)
T 2zwa_A 469 DNW--IFDMKTREWSMIKSLSH-TRFR-----HSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNS- 538 (695)
T ss_dssp CCE--EEETTTTEEEECCCCSB-CCBS-----CEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSC-
T ss_pred cEE--EEeCCCCcEEECCCCCC-Cccc-----ceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCcc-
Confidence 566 99999999999865432 1111 445554 99999998765323 79999999999998863 3332
Q ss_pred CCCCeEEEEC---CeEEEEEecCC-----CCeEEEEEEcCCe------eEEEEEEccCCceeEEEEEeeCCcEEEEee--
Q 037345 253 FPNPILGVYD---NSLHFLDFDRS-----ESCFEKWVMKEGS------WTKQLSVGPILGVLRALEFWKNGSFFIESN-- 316 (357)
Q Consensus 253 ~~~~~l~~~~---g~L~l~~~~~~-----~~~~~iW~l~~~~------W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-- 316 (357)
.....+.++ |+|++++.... ...+.++-++... |.+....++.........+.+++.||++..
T Consensus 539 -~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 539 -LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp -CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBC
T ss_pred -cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCcc
Confidence 222334445 88999886521 1334444444566 887766432222222333344478888753
Q ss_pred -------CCeEEEEECCCCcEEEeeec
Q 037345 317 -------TNQLLLYDPNTRALRDVGLG 336 (357)
Q Consensus 317 -------~~~~~~yd~~t~~~~~v~~~ 336 (357)
...+..||+++++|+.+.++
T Consensus 618 ~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp SSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred CCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 24699999999999977553
No 16
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.83 E-value=2.7e-07 Score=82.10 Aligned_cols=143 Identities=10% Similarity=0.069 Sum_probs=96.6
Q ss_pred EEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCC----CcCEEEEEECCCcceeEec-CCCCCCCCCC
Q 037345 182 ILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYN----NCQEILSFHMRDEAFHVIK-CPDNSYFPNP 256 (357)
Q Consensus 182 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~----~~~~i~~fD~~~e~~~~i~-lP~~~~~~~~ 256 (357)
.+|+..+++|+.++..+. +... ...+.++|.+|.+.+... ....+..||+.+.+|+.+. +|... ...
T Consensus 81 ~~~d~~~~~W~~~~~~p~-~r~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~ 152 (318)
T 2woz_A 81 FQLDNVSSEWVGLPPLPS-ARCL-----FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV--YGH 152 (318)
T ss_dssp EEEETTTTEEEECSCBSS-CBCS-----CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE--ESC
T ss_pred EEEeCCCCcEEECCCCCc-cccc-----cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc--ccc
Confidence 399999999998865432 1111 556788999999986531 2246899999999999884 45443 224
Q ss_pred eEEEECCeEEEEEecC--CCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee------CCeEEEEECC
Q 037345 257 ILGVYDNSLHFLDFDR--SESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN------TNQLLLYDPN 326 (357)
Q Consensus 257 ~l~~~~g~L~l~~~~~--~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~ 326 (357)
..+..+|+|+++.... ....-.+|.++- .+|.+...++. .......+..++.||+... ...+..||++
T Consensus 153 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 230 (318)
T 2woz_A 153 NVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKT--PRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLK 230 (318)
T ss_dssp EEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETT
T ss_pred EEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCC--CcccceEEEECCEEEEEcCcCCCCccceEEEEECC
Confidence 5677899999987642 122335677775 89998754432 1222222334678888753 1368899999
Q ss_pred CCcEEEee
Q 037345 327 TRALRDVG 334 (357)
Q Consensus 327 t~~~~~v~ 334 (357)
+++|+++.
T Consensus 231 ~~~W~~~~ 238 (318)
T 2woz_A 231 TNKWEVMT 238 (318)
T ss_dssp TCCEEECC
T ss_pred CCeEEECC
Confidence 99999993
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.73 E-value=1.6e-06 Score=78.40 Aligned_cols=147 Identities=12% Similarity=0.119 Sum_probs=90.4
Q ss_pred ceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCC---CcCEEEEEEC--CCcceeEec-CCCCC
Q 037345 178 STEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYN---NCQEILSFHM--RDEAFHVIK-CPDNS 251 (357)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~---~~~~i~~fD~--~~e~~~~i~-lP~~~ 251 (357)
.++ +|+..+++|+.++..+. + .......+.++|.+|.+.+... ....+..||+ ++.+|+.+. +|...
T Consensus 169 ~v~--~yd~~~~~W~~~~~~p~---~--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~ 241 (357)
T 2uvk_A 169 FLL--SFDPSTQQWSYAGESPW---Y--GTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPD 241 (357)
T ss_dssp EEE--EEETTTTEEEEEEECSS---C--CCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTT
T ss_pred cEE--EEeCCCCcEEECCCCCC---C--CcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCc
Confidence 555 99999999999864332 1 1111456788999999875421 1346777876 899999874 44332
Q ss_pred CCCCCeEEEECCeEEEEEecCC------------------CCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcE
Q 037345 252 YFPNPILGVYDNSLHFLDFDRS------------------ESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSF 311 (357)
Q Consensus 252 ~~~~~~l~~~~g~L~l~~~~~~------------------~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i 311 (357)
.......+..+|+|+++..... ...-.+|+++- .+|.++..++.. .....++..++.|
T Consensus 242 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~i 319 (357)
T 2uvk_A 242 GVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG--RAYGVSLPWNNSL 319 (357)
T ss_dssp CCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC--CBSSEEEEETTEE
T ss_pred ccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC--cccceeEEeCCEE
Confidence 2333457888999999876321 11234555554 899998765432 2223334456788
Q ss_pred EEEee---C----CeEEEEECCCCcEEEe
Q 037345 312 FIESN---T----NQLLLYDPNTRALRDV 333 (357)
Q Consensus 312 ~~~~~---~----~~~~~yd~~t~~~~~v 333 (357)
+++.. + ..+..++++++++.+.
T Consensus 320 ~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 320 LIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred EEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 88754 1 3588899999999776
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.72 E-value=1.5e-05 Score=74.08 Aligned_cols=49 Identities=20% Similarity=0.303 Sum_probs=43.6
Q ss_pred CCCCCCCcHHHHHHHHhcCCccccchhhcchHhHHhhcCChHHHHHHhh
Q 037345 1 MTSNDDFSEDLLIEILSRLPVKSLMRYKFVCRFWCALIKSPRFVSRHII 49 (357)
Q Consensus 1 m~~~~~LP~Dll~~IL~rLP~~sl~r~r~VcK~W~~li~~p~F~~~~~~ 49 (357)
++.+..||+|++.+||+.|++++|.|+++|||+|+.++.++.+-+....
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~ 64 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCK 64 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHT
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhhee
Confidence 3567899999999999999999999999999999999999877666554
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.63 E-value=4.1e-05 Score=71.31 Aligned_cols=43 Identities=12% Similarity=0.283 Sum_probs=38.1
Q ss_pred CCCCcHHHHHHHHhcCCccccchhhcchHhHHhhcCC-hHHHHH
Q 037345 4 NDDFSEDLLIEILSRLPVKSLMRYKFVCRFWCALIKS-PRFVSR 46 (357)
Q Consensus 4 ~~~LP~Dll~~IL~rLP~~sl~r~r~VcK~W~~li~~-p~F~~~ 46 (357)
+..||+|++.+||+.||+++|+|++.|||+|+.++.+ +..-+.
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~ 58 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKK 58 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHH
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 4579999999999999999999999999999999998 554443
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.55 E-value=4.7e-06 Score=77.28 Aligned_cols=43 Identities=23% Similarity=0.366 Sum_probs=37.7
Q ss_pred CCCCcHH----HHHHHHhcCCccccchhhcchHhHHhhcCChHHHHH
Q 037345 4 NDDFSED----LLIEILSRLPVKSLMRYKFVCRFWCALIKSPRFVSR 46 (357)
Q Consensus 4 ~~~LP~D----ll~~IL~rLP~~sl~r~r~VcK~W~~li~~p~F~~~ 46 (357)
++.||+| ++.+||+.|++++|.|+++|||+|+.++.++.+=+.
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~ 57 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKK 57 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHH
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 4569999 999999999999999999999999999987664443
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.14 E-value=3.6e-05 Score=75.51 Aligned_cols=206 Identities=12% Similarity=0.075 Sum_probs=115.2
Q ss_pred cceEEEeecC-----------CCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCC
Q 037345 104 NGLFCLHDKN-----------SNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNT 172 (357)
Q Consensus 104 ~GLll~~~~~-----------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~ 172 (357)
+|.|++..+. ...+.++||.|++|..++..+...... ..+..+.. .+ +++.+.....
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~------~~~~~~~~-~g--~lyv~GG~~~--- 264 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF------CPGISMDG-NG--QIVVTGGNDA--- 264 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS------SCEEEECT-TS--CEEEECSSST---
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc------cccccCCC-CC--CEEEeCCCCC---
Confidence 7777766421 125789999999999998765432211 11222111 11 2333322111
Q ss_pred CCCCcceEEEEEEcCCCceeecccCCcccccccCCCCCcceEE-CceEEEEEccCC---CcCEEEEEECCCcceeEecC-
Q 037345 173 RKDSVSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL-DRICYWIAWRYN---NCQEILSFHMRDEAFHVIKC- 247 (357)
Q Consensus 173 ~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~-~G~lyw~~~~~~---~~~~i~~fD~~~e~~~~i~l- 247 (357)
..++ +|+..+++|..++..+. .+.. ...+.+ +|.+|.+.+... ....+..||+.+++|+.++.
T Consensus 265 ----~~v~--~yd~~t~~W~~~~~~~~-----~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~ 332 (656)
T 1k3i_A 265 ----KKTS--LYDSSSDSWIPGPDMQV-----ARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNA 332 (656)
T ss_dssp ----TCEE--EEEGGGTEEEECCCCSS-----CCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTS
T ss_pred ----CceE--EecCcCCceeECCCCCc-----cccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCc
Confidence 2566 99999999998864322 1111 344566 999999987321 23578999999999998741
Q ss_pred ---CCCCCCCCCeEEEECCeEEEEEecC-------CCCeEEEEEEcCCeeEEEEEEccC------CceeEEEEE--eeCC
Q 037345 248 ---PDNSYFPNPILGVYDNSLHFLDFDR-------SESCFEKWVMKEGSWTKQLSVGPI------LGVLRALEF--WKNG 309 (357)
Q Consensus 248 ---P~~~~~~~~~l~~~~g~L~l~~~~~-------~~~~~~iW~l~~~~W~~~~~i~~~------~~~~~~~~~--~~~~ 309 (357)
|...... ..++..+++++++.... ....++.|-.+...|......... ........+ ..++
T Consensus 333 ~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~ 411 (656)
T 1k3i_A 333 KVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG 411 (656)
T ss_dssp CSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTT
T ss_pred cccccccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCC
Confidence 2111111 12233456666655321 234556665555777654322211 011111111 2367
Q ss_pred cEEEEeeC---------C---eEEEEECCCCcEEEee
Q 037345 310 SFFIESNT---------N---QLLLYDPNTRALRDVG 334 (357)
Q Consensus 310 ~i~~~~~~---------~---~~~~yd~~t~~~~~v~ 334 (357)
+||++... . .+..||+++++|+++.
T Consensus 412 ~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 412 KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 88887531 1 6889999999999873
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.06 E-value=7.1e-05 Score=73.42 Aligned_cols=218 Identities=9% Similarity=0.031 Sum_probs=122.4
Q ss_pred EEecccceEEEeec-CCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCc
Q 037345 99 LLGNCNGLFCLHDK-NSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSV 177 (357)
Q Consensus 99 ~~~s~~GLll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~ 177 (357)
.....+|.|++..+ ....+.++||.|++|..+++++..+..+ ....+ + .+ |++.+.....+ .....
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~-------s~~~~-~-dg--~iyv~GG~~~~--~~~~~ 314 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQ-------SSATM-S-DG--RVFTIGGSWSG--GVFEK 314 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSC-------EEEEC-T-TS--CEEEECCCCCS--SSCCC
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccccc-------ceEEe-c-CC--eEEEEeCcccC--Ccccc
Confidence 33446788877765 3346899999999999998876543221 11122 1 12 23333221111 11234
Q ss_pred ceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCC------CcCEEEEEECCCcceeEec-CCCC
Q 037345 178 STEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYN------NCQEILSFHMRDEAFHVIK-CPDN 250 (357)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~------~~~~i~~fD~~~e~~~~i~-lP~~ 250 (357)
.+| +|+..+++|+.++.....+++.... ...+..+|.+|.+.+.+. ....+..||+.++.|.... .+..
T Consensus 315 ~~e--~yd~~t~~W~~~~~~~~~p~~~~~~--~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~ 390 (656)
T 1k3i_A 315 NGE--VYSPSSKTWTSLPNAKVNPMLTADK--QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 390 (656)
T ss_dssp CEE--EEETTTTEEEEETTSCSGGGCCCCT--TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEE
T ss_pred cce--EeCCCCCcceeCCCccccccccccc--cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccc
Confidence 667 9999999999875432112222111 234446777777764321 2357899999999986432 1111
Q ss_pred -----CCCCCCeEE---EECCeEEEEEecC-------CCCeEEEEEEcC--CeeEEEE--EEccCCceeEEEEEeeCCcE
Q 037345 251 -----SYFPNPILG---VYDNSLHFLDFDR-------SESCFEKWVMKE--GSWTKQL--SVGPILGVLRALEFWKNGSF 311 (357)
Q Consensus 251 -----~~~~~~~l~---~~~g~L~l~~~~~-------~~~~~~iW~l~~--~~W~~~~--~i~~~~~~~~~~~~~~~~~i 311 (357)
........+ ..+|+|+++.... ......|++.+- ..|.+.. .++.. ....-..+..+|+|
T Consensus 391 ~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~-R~~~~~~~l~~g~i 469 (656)
T 1k3i_A 391 NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA-RTFHTSVVLPDGST 469 (656)
T ss_dssp TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC-CBSCEEEECTTSCE
T ss_pred ccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC-cccCCeEECCCCCE
Confidence 001111222 2489999887632 112224555554 7898765 33211 11222233347888
Q ss_pred EEEee-C-----------CeEEEEECCCCcEEEee
Q 037345 312 FIESN-T-----------NQLLLYDPNTRALRDVG 334 (357)
Q Consensus 312 ~~~~~-~-----------~~~~~yd~~t~~~~~v~ 334 (357)
|++.. + ..+..||+++++|+.+.
T Consensus 470 ~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 470 FITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp EEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred EEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 88753 1 46899999999999983
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.91 E-value=0.00011 Score=72.56 Aligned_cols=151 Identities=11% Similarity=0.030 Sum_probs=97.0
Q ss_pred cceEEEEEEcCCCceeecc-cCCcccccccCCCCCcceEE--CceEEEEEccCC---CcCEEEEEECCCcceeEec-CCC
Q 037345 177 VSTEVILHTLSTDSWRYLK-ANELSDYSFLGGQQSENTYL--DRICYWIAWRYN---NCQEILSFHMRDEAFHVIK-CPD 249 (357)
Q Consensus 177 ~~~~~~vyss~t~~W~~~~-~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~---~~~~i~~fD~~~e~~~~i~-lP~ 249 (357)
..+. +|+..+++|+.+. ..+...++..+.. ...+.+ +|.+|.+.+... ....+..||+.+.+|+.+. +|.
T Consensus 412 ~~v~--~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~ 488 (695)
T 2zwa_A 412 NEIL--QLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH 488 (695)
T ss_dssp CCEE--EEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB
T ss_pred CcEE--EEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC
Confidence 3555 9999999999987 3221112221111 566778 999999987542 1246899999999999874 443
Q ss_pred CCCCCCCeEEEE-CCeEEEEEecCCCCeEEEEEEcC--CeeEEEEEEccC-CceeEE--EEEeeC-CcEEEEee------
Q 037345 250 NSYFPNPILGVY-DNSLHFLDFDRSESCFEKWVMKE--GSWTKQLSVGPI-LGVLRA--LEFWKN-GSFFIESN------ 316 (357)
Q Consensus 250 ~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~-~~~~~~--~~~~~~-~~i~~~~~------ 316 (357)
.. .....+.. +|+|++++...... .+|+++- ..|......+.. ...... +.+..+ +.||+...
T Consensus 489 ~R--~~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~ 564 (695)
T 2zwa_A 489 TR--FRHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT 564 (695)
T ss_dssp CC--BSCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS
T ss_pred Cc--ccceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC
Confidence 32 23455664 99999998764333 7777776 899987653211 111122 222223 66887753
Q ss_pred --CCeEEEEECCCCc------EEEee
Q 037345 317 --TNQLLLYDPNTRA------LRDVG 334 (357)
Q Consensus 317 --~~~~~~yd~~t~~------~~~v~ 334 (357)
...+..||+++++ |+++.
T Consensus 565 ~~~~~v~~yd~~~~~w~~~~~W~~~~ 590 (695)
T 2zwa_A 565 TVSDKAIIFKYDAENATEPITVIKKL 590 (695)
T ss_dssp CBCCEEEEEEECTTCSSCCEEEEEEE
T ss_pred eeeCcEEEEEccCCccccceEEEEcC
Confidence 1469999999999 88873
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.72 E-value=1.7e-05 Score=68.15 Aligned_cols=48 Identities=17% Similarity=0.277 Sum_probs=43.5
Q ss_pred CCCCcHHHHHHHHhcCCccccchhhcchHhHHhhcCChHHHHHHhhcC
Q 037345 4 NDDFSEDLLIEILSRLPVKSLMRYKFVCRFWCALIKSPRFVSRHIINY 51 (357)
Q Consensus 4 ~~~LP~Dll~~IL~rLP~~sl~r~r~VcK~W~~li~~p~F~~~~~~~~ 51 (357)
+..||+|++..||+.|++++|+|+.+|||+|+.+..++..=+.+..+.
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 468999999999999999999999999999999999998777766654
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.57 E-value=2.6e-05 Score=69.61 Aligned_cols=41 Identities=29% Similarity=0.519 Sum_probs=37.7
Q ss_pred CCCCCCcHHHHHHHHhcCCccccchhhcchHhHHhhcCChH
Q 037345 2 TSNDDFSEDLLIEILSRLPVKSLMRYKFVCRFWCALIKSPR 42 (357)
Q Consensus 2 ~~~~~LP~Dll~~IL~rLP~~sl~r~r~VcK~W~~li~~p~ 42 (357)
..+..||+|++.+||.+|+.+++.+++.|||+|+.++.+|.
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 45789999999999999999999999999999999987654
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.01 E-value=0.00021 Score=68.96 Aligned_cols=36 Identities=22% Similarity=0.433 Sum_probs=29.4
Q ss_pred CCCCCCcHHHHHHHHhcCC-ccccchhhcchHhHHhh
Q 037345 2 TSNDDFSEDLLIEILSRLP-VKSLMRYKFVCRFWCAL 37 (357)
Q Consensus 2 ~~~~~LP~Dll~~IL~rLP-~~sl~r~r~VcK~W~~l 37 (357)
+.++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4568999999999999999 89999999999999988
No 27
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.67 E-value=0.25 Score=42.02 Aligned_cols=193 Identities=10% Similarity=0.048 Sum_probs=97.8
Q ss_pred EEecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcc
Q 037345 99 LLGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVS 178 (357)
Q Consensus 99 ~~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~ 178 (357)
+....+|.+.+.......++++|| +++...+..+.. ... ..++..|+.. . +. +..... ..
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~--~~~------~~~i~~~~~g-~--l~-v~~~~~-------~~ 163 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK--GSY------PSFITLGSDN-A--LW-FTENQN-------NA 163 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST--TCC------EEEEEECTTS-C--EE-EEETTT-------TE
T ss_pred eEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC--CCC------CceEEEcCCC-C--EE-EEeCCC-------CE
Confidence 334457777776654457889999 766554432211 111 4566677543 2 11 111111 13
Q ss_pred eEEEEEEcCCCceeecccCCcccccccCCCCCcceEE--CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCC
Q 037345 179 TEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL--DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNP 256 (357)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~ 256 (357)
+.+|+. ++.......... ... -.++.+ +|.+|+.... ...|..+|. +.++..+.+|...... .
T Consensus 164 --i~~~~~-~g~~~~~~~~~~--~~~-----~~~i~~~~~g~l~v~~~~---~~~i~~~~~-~g~~~~~~~~~~~~~~-~ 228 (299)
T 2z2n_A 164 --IGRITE-SGDITEFKIPTP--ASG-----PVGITKGNDDALWFVEII---GNKIGRITT-SGEITEFKIPTPNARP-H 228 (299)
T ss_dssp --EEEECT-TCCEEEEECSST--TCC-----EEEEEECTTSSEEEEETT---TTEEEEECT-TCCEEEEECSSTTCCE-E
T ss_pred --EEEEcC-CCcEEEeeCCCC--CCc-----ceeEEECCCCCEEEEccC---CceEEEECC-CCcEEEEECCCCCCCc-e
Confidence 337777 666554321111 100 122333 5787665533 248999999 7777777666332111 1
Q ss_pred eEEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcEE
Q 037345 257 ILGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESNTNQLLLYDPNTRALR 331 (357)
Q Consensus 257 ~l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~ 331 (357)
.+.. .+|.|++... ....+.++-.+ .. ...+.+.........+.+ .+|.+++....+.++.||+++++++
T Consensus 229 ~i~~~~~g~l~v~~~--~~~~i~~~d~~-g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 229 AITAGAGIDLWFTEW--GANKIGRLTSN-NI-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp EEEECSTTCEEEEET--TTTEEEEEETT-TE-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred eEEECCCCCEEEecc--CCceEEEECCC-Cc-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 2333 3678877664 24555555442 32 122222211122334445 6788888766789999999998764
No 28
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.54 E-value=0.00076 Score=64.96 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=31.8
Q ss_pred CCCCcHHHHHHHHhcC-CccccchhhcchHhHHhh
Q 037345 4 NDDFSEDLLIEILSRL-PVKSLMRYKFVCRFWCAL 37 (357)
Q Consensus 4 ~~~LP~Dll~~IL~rL-P~~sl~r~r~VcK~W~~l 37 (357)
...||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3579999999999999 899999999999999987
No 29
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.50 E-value=0.97 Score=38.21 Aligned_cols=207 Identities=13% Similarity=0.138 Sum_probs=104.2
Q ss_pred EEecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcc
Q 037345 99 LLGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVS 178 (357)
Q Consensus 99 ~~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~ 178 (357)
+.-+.+|-+.+......++.++||..+....++......... ....++.+++..+..-|. .... ...
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~----~~p~~i~~~~~~g~l~v~---~~~~------~~~ 101 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQL----LYPNRVAVVRNSGDIIVT---ERSP------THQ 101 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCB----SSEEEEEEETTTTEEEEE---ECGG------GCE
T ss_pred EEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccc----cCceEEEEEcCCCeEEEE---cCCC------CCE
Confidence 333456776666544457889998865555554322111000 114566665443332221 1110 113
Q ss_pred eEEEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeE
Q 037345 179 TEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPIL 258 (357)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l 258 (357)
+++|+..+..-+.+..... ..+. .-.+.-+|.+|..... ...|..||...+....+..+...... ..+
T Consensus 102 --i~~~d~~g~~~~~~~~~~~-~~~~-----~i~~~~~g~l~v~~~~---~~~i~~~~~~g~~~~~~~~~~~~~~p-~~i 169 (286)
T 1q7f_A 102 --IQIYNQYGQFVRKFGATIL-QHPR-----GVTVDNKGRIIVVECK---VMRVIIFDQNGNVLHKFGCSKHLEFP-NGV 169 (286)
T ss_dssp --EEEECTTSCEEEEECTTTC-SCEE-----EEEECTTSCEEEEETT---TTEEEEECTTSCEEEEEECTTTCSSE-EEE
T ss_pred --EEEECCCCcEEEEecCccC-CCce-----EEEEeCCCCEEEEECC---CCEEEEEcCCCCEEEEeCCCCccCCc-EEE
Confidence 3378744333222321110 0110 1112236887765543 25899999887776666543222111 123
Q ss_pred EE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCce--eEEEEEeeCCcEEEEee-CC-eEEEEECCCCcEEEe
Q 037345 259 GV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGV--LRALEFWKNGSFFIESN-TN-QLLLYDPNTRALRDV 333 (357)
Q Consensus 259 ~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~--~~~~~~~~~~~i~~~~~-~~-~~~~yd~~t~~~~~v 333 (357)
+. .+|+|+++.. ....+.+|-.+. .. ...+...... ..-+++..+|.+++... ++ .+..||.+.+.++.+
T Consensus 170 ~~~~~g~l~v~~~--~~~~i~~~~~~g-~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 170 VVNDKQEIFISDN--RAHCVKVFNYEG-QY--LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISAL 244 (286)
T ss_dssp EECSSSEEEEEEG--GGTEEEEEETTC-CE--EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEE
T ss_pred EECCCCCEEEEEC--CCCEEEEEcCCC-CE--EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEE
Confidence 33 3578877665 356777776543 22 2233322112 23345556688888765 43 899999988777777
Q ss_pred ee
Q 037345 334 GL 335 (357)
Q Consensus 334 ~~ 335 (357)
..
T Consensus 245 ~~ 246 (286)
T 1q7f_A 245 ES 246 (286)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 30
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.44 E-value=3.6 Score=35.80 Aligned_cols=66 Identities=5% Similarity=0.172 Sum_probs=44.3
Q ss_pred CCeEEEEEecCCCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeC---CcEEEEe-eCCeEEEEECCCCc
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKN---GSFFIES-NTNQLLLYDPNTRA 329 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~i~~~~-~~~~~~~yd~~t~~ 329 (357)
+|.+.+++. .+..+.||-+.. ..+.....+........-+.+..+ +.+++.. .++.+..||++++.
T Consensus 171 ~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 171 ESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp TTCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCEEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 466655555 467899999987 667777766543333445555566 5665554 47889999999863
No 31
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.42 E-value=3.1 Score=34.98 Aligned_cols=190 Identities=13% Similarity=0.191 Sum_probs=96.9
Q ss_pred cccceEEEeecC-CCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceE
Q 037345 102 NCNGLFCLHDKN-SNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTE 180 (357)
Q Consensus 102 s~~GLll~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (357)
..+|.+.+.... ...+.++|+..+....+..... .. ..++.+|+.. .. +. ..... ..
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~---~~------~~~i~~~~~g-~l--~v-~~~~~-------~~-- 143 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL---QH------PRGVTVDNKG-RI--IV-VECKV-------MR-- 143 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC---SC------EEEEEECTTS-CE--EE-EETTT-------TE--
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC---CC------ceEEEEeCCC-CE--EE-EECCC-------CE--
Confidence 467777776632 3478889965444433432211 11 4567777643 22 21 11111 13
Q ss_pred EEEEEcCCCceeecccCCcccccccCCCCCcceE--ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeE
Q 037345 181 VILHTLSTDSWRYLKANELSDYSFLGGQQSENTY--LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPIL 258 (357)
Q Consensus 181 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l 258 (357)
+.+|+..+..-+.+.... .... -.++. -+|.+|..... ...|..||...+....+..+...... ..+
T Consensus 144 i~~~~~~g~~~~~~~~~~--~~~~-----p~~i~~~~~g~l~v~~~~---~~~i~~~~~~g~~~~~~~~~g~~~~p-~~i 212 (286)
T 1q7f_A 144 VIIFDQNGNVLHKFGCSK--HLEF-----PNGVVVNDKQEIFISDNR---AHCVKVFNYEGQYLRQIGGEGITNYP-IGV 212 (286)
T ss_dssp EEEECTTSCEEEEEECTT--TCSS-----EEEEEECSSSEEEEEEGG---GTEEEEEETTCCEEEEESCTTTSCSE-EEE
T ss_pred EEEEcCCCCEEEEeCCCC--ccCC-----cEEEEECCCCCEEEEECC---CCEEEEEcCCCCEEEEEccCCccCCC-cEE
Confidence 337776544333332111 1110 12333 35787765543 35899999988766666543221111 123
Q ss_pred EE-ECCeEEEEEecCCCC-eEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEeeCCeEEEEECCC
Q 037345 259 GV-YDNSLHFLDFDRSES-CFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESNTNQLLLYDPNT 327 (357)
Q Consensus 259 ~~-~~g~L~l~~~~~~~~-~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t 327 (357)
.. .+|.|+++... .. .+.+|-.+ ..-..............-+++..+|.+++...++.+..|++..
T Consensus 213 ~~d~~G~l~v~~~~--~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 213 GINSNGEILIADNH--NNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EECTTCCEEEEECS--SSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EECCCCCEEEEeCC--CCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 33 36888877653 33 77777533 2222222222111112345556678888876677888888754
No 32
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.19 E-value=4.4 Score=39.91 Aligned_cols=66 Identities=5% Similarity=0.172 Sum_probs=43.6
Q ss_pred CCeEEEEEecCCCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeC---CcEEEEe-eCCeEEEEECCCCc
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKN---GSFFIES-NTNQLLLYDPNTRA 329 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~i~~~~-~~~~~~~yd~~t~~ 329 (357)
+|.+.+++. .+..+.||-+.. ..+.....+........-+.+..+ +.+++.. .++.+..||+++++
T Consensus 169 d~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 169 ESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp GGCCEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred CCCEEEEEE--CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 355555555 467899999987 666766666543333444555555 6666554 47889999998863
No 33
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.91 E-value=2.7 Score=35.14 Aligned_cols=112 Identities=13% Similarity=0.133 Sum_probs=70.3
Q ss_pred EECceEEEEEccCCCcCEEEEEECCCcce-eEecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEE
Q 037345 214 YLDRICYWIAWRYNNCQEILSFHMRDEAF-HVIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLS 292 (357)
Q Consensus 214 ~~~G~lyw~~~~~~~~~~i~~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~ 292 (357)
+.+|.+|--++.. +...|..+|+++.+. ..+++|... +...+...+++|+++... +. .+|+.+-.+-.++.+
T Consensus 28 ~~~~~LyestG~~-g~S~v~~vD~~tgkv~~~~~l~~~~--fgeGi~~~~~~ly~ltw~--~~--~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 28 YLRGHLYESTGET-GRSSVRKVDLETGRILQRAEVPPPY--FGAGIVAWRDRLIQLTWR--NH--EGFVYDLATLTPRAR 100 (243)
T ss_dssp EETTEEEEEECCT-TSCEEEEEETTTCCEEEEEECCTTC--CEEEEEEETTEEEEEESS--SS--EEEEEETTTTEEEEE
T ss_pred EECCEEEEECCCC-CCceEEEEECCCCCEEEEEeCCCCc--ceeEEEEeCCEEEEEEee--CC--EEEEEECCcCcEEEE
Confidence 3456777655442 356899999998877 457887654 222456678999998752 33 355555433345555
Q ss_pred EccCCceeEEEEEeeCCc-EEEEeeCCeEEEEECCCCcE-EEeee
Q 037345 293 VGPILGVLRALEFWKNGS-FFIESNTNQLLLYDPNTRAL-RDVGL 335 (357)
Q Consensus 293 i~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~yd~~t~~~-~~v~~ 335 (357)
|... ..+.++..+++ +++-..+..+..+|++|.+. +++.+
T Consensus 101 i~~~---~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 101 FRYP---GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EECS---SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EeCC---CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 5532 13456655555 55555577899999999766 44433
No 34
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=92.89 E-value=3.7 Score=34.43 Aligned_cols=196 Identities=10% Similarity=0.089 Sum_probs=100.0
Q ss_pred eEEecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCc
Q 037345 98 ELLGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSV 177 (357)
Q Consensus 98 ~~~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~ 177 (357)
.+....+|-+.+.......+.++||. ++...++.+.. ... ..++..|+.. ..-+ ..... .
T Consensus 24 ~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~--~~~------~~~i~~~~~g-~l~v---~~~~~-------~ 83 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP--DAK------VMCLIVSSLG-DIWF---TENGA-------N 83 (300)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST--TCC------EEEEEECTTS-CEEE---EETTT-------T
T ss_pred eeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC--CCc------ceeEEECCCC-CEEE---EecCC-------C
Confidence 34445577777776555578899998 66555433211 111 4566666543 2221 11111 1
Q ss_pred ceEEEEEEcCCCceeecccCCcccccccCCCCCcceE--ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCC
Q 037345 178 STEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTY--LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPN 255 (357)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~ 255 (357)
... +|+.. +..+....... ... -.++. -+|.+|+.... ...|..+|.+ .+...+.+|......
T Consensus 84 ~v~--~~d~~-g~~~~~~~~~~--~~~-----~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-g~~~~~~~~~~~~~~- 148 (300)
T 2qc5_A 84 KIG--KLSKK-GGFTEYPLPQP--DSG-----PYGITEGLNGDIWFTQLN---GDRIGKLTAD-GTIYEYDLPNKGSYP- 148 (300)
T ss_dssp EEE--EECTT-SCEEEEECSST--TCC-----EEEEEECSTTCEEEEETT---TTEEEEECTT-SCEEEEECSSTTCCE-
T ss_pred eEE--EECCC-CCeEEecCCCC--CCC-----CccceECCCCCEEEEccC---CCeEEEECCC-CCEEEccCCCCCCCc-
Confidence 333 77766 65554332111 000 12232 26887766542 2489999998 677666666432111
Q ss_pred CeEEE-ECCeEEEEEecCCCCeEEEEEEcC-CeeEEEEEEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCCcEEE
Q 037345 256 PILGV-YDNSLHFLDFDRSESCFEKWVMKE-GSWTKQLSVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTRALRD 332 (357)
Q Consensus 256 ~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~ 332 (357)
..+.. .+|+|++.... ... |+.++. .+... ...........-+.+..+|.+++... .+.+..||+ ++++..
T Consensus 149 ~~i~~d~~g~l~v~~~~--~~~--i~~~~~~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~ 222 (300)
T 2qc5_A 149 AFITLGSDNALWFTENQ--NNS--IGRITNTGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE 222 (300)
T ss_dssp EEEEECTTSSEEEEETT--TTE--EEEECTTCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE
T ss_pred eeEEECCCCCEEEEecC--CCe--EEEECCCCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE
Confidence 22333 35777776642 333 444443 33332 22211111123344445677887764 457999999 566665
Q ss_pred ee
Q 037345 333 VG 334 (357)
Q Consensus 333 v~ 334 (357)
+.
T Consensus 223 ~~ 224 (300)
T 2qc5_A 223 YD 224 (300)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 35
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.15 E-value=4.6 Score=33.79 Aligned_cols=198 Identities=11% Similarity=0.090 Sum_probs=99.8
Q ss_pred EEecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcc
Q 037345 99 LLGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVS 178 (357)
Q Consensus 99 ~~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~ 178 (357)
+....+|.+.+.......++++||. ++...+..+.. ... ..++.+|+.. .. .+..... ..
T Consensus 62 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~--~~~------~~~i~~~~~g-~l---~v~~~~~-------~~ 121 (299)
T 2z2n_A 62 LTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNP--DSA------PYGITEGPNG-DI---WFTEMNG-------NR 121 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST--TCC------EEEEEECTTS-CE---EEEETTT-------TE
T ss_pred EEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCc--CCC------ceeeEECCCC-CE---EEEecCC-------ce
Confidence 4444577777776544578899986 44433332111 111 4567777543 21 1211111 13
Q ss_pred eEEEEEEcCCCceeecccCCcccccccCCCCCcceE--ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCC
Q 037345 179 TEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTY--LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNP 256 (357)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~ 256 (357)
.. +|+. ++.......... ... -.++. -+|.+|..... ...|..+|. +.++..+.+|...... .
T Consensus 122 i~--~~d~-~g~~~~~~~~~~--~~~-----~~~i~~~~~g~l~v~~~~---~~~i~~~~~-~g~~~~~~~~~~~~~~-~ 186 (299)
T 2z2n_A 122 IG--RITD-DGKIREYELPNK--GSY-----PSFITLGSDNALWFTENQ---NNAIGRITE-SGDITEFKIPTPASGP-V 186 (299)
T ss_dssp EE--EECT-TCCEEEEECSST--TCC-----EEEEEECTTSCEEEEETT---TTEEEEECT-TCCEEEEECSSTTCCE-E
T ss_pred EE--EECC-CCCEEEecCCCC--CCC-----CceEEEcCCCCEEEEeCC---CCEEEEEcC-CCcEEEeeCCCCCCcc-e
Confidence 33 6666 554443321110 000 12222 25777765533 248999999 7777776665432111 1
Q ss_pred eEEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEe-eCCeEEEEECCCCcEEEee
Q 037345 257 ILGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIES-NTNQLLLYDPNTRALRDVG 334 (357)
Q Consensus 257 ~l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~v~ 334 (357)
.+.. .+|.|++... ....+.++-. +..... ...........-+.+..+|.+++.. ..+.+..||+ +++++.+.
T Consensus 187 ~i~~~~~g~l~v~~~--~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~ 261 (299)
T 2z2n_A 187 GITKGNDDALWFVEI--IGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYP 261 (299)
T ss_dssp EEEECTTSSEEEEET--TTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEE
T ss_pred eEEECCCCCEEEEcc--CCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEe
Confidence 2333 3577877664 2445555544 333222 2222111122334445567877765 3578999999 56777765
Q ss_pred ec
Q 037345 335 LG 336 (357)
Q Consensus 335 ~~ 336 (357)
++
T Consensus 262 ~~ 263 (299)
T 2z2n_A 262 IQ 263 (299)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 36
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.51 E-value=5.7 Score=33.53 Aligned_cols=206 Identities=7% Similarity=-0.112 Sum_probs=96.1
Q ss_pred EEecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEE-EecC---C-CCC
Q 037345 99 LLGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFIL-NLTD---D-NTR 173 (357)
Q Consensus 99 ~~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~-~~~~---~-~~~ 173 (357)
+.-+.+|.+++.......++++||.|++...+......... .....+.+|+.. .+-+.-.. .... . ...
T Consensus 74 l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~-----~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 74 HCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKL-----NSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp EEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEEC-----CCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCC
T ss_pred eeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCC-----CCCCCEEECCCC-CEEEECCcccccccccccccc
Confidence 44456787777665545789999999887766432211000 012346666643 32221000 0000 0 000
Q ss_pred CCCcceEEEEEEcCCCceeecccCCcccccccCCCCCcceE--ECceEEEEEccCCCcCEEEEEECC-Ccce-eEec-CC
Q 037345 174 KDSVSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTY--LDRICYWIAWRYNNCQEILSFHMR-DEAF-HVIK-CP 248 (357)
Q Consensus 174 ~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~i~~fD~~-~e~~-~~i~-lP 248 (357)
.......+..|+.. ++-+.+... ... ..++. -+|.+++.... ...|..||+. +.++ .... +.
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~~~~----~~~-----~~gi~~s~dg~~lv~~~~---~~~i~~~~~~~~g~~~~~~~~~~ 214 (296)
T 3e5z_A 148 MELPGRWVFRLAPD-GTLSAPIRD----RVK-----PNGLAFLPSGNLLVSDTG---DNATHRYCLNARGETEYQGVHFT 214 (296)
T ss_dssp CCSSSCEEEEECTT-SCEEEEECC----CSS-----EEEEEECTTSCEEEEETT---TTEEEEEEECSSSCEEEEEEEEC
T ss_pred ccCCCcEEEEECCC-CCEEEeecC----CCC-----CccEEECCCCCEEEEeCC---CCeEEEEEECCCCcCcCCCeEee
Confidence 00012232244433 333332211 111 22333 35776644332 3588889986 4555 2111 11
Q ss_pred CCCCCCCCeEE-EECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEe-eCCcEEEEeeCCeEEEEECC
Q 037345 249 DNSYFPNPILG-VYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFW-KNGSFFIESNTNQLLLYDPN 326 (357)
Q Consensus 249 ~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~yd~~ 326 (357)
...... ..+. ..+|+|++.. ...+.+|-.+ +.-......+ .. ..-+.+. .+++.+++.....++.++++
T Consensus 215 ~~~~~p-~~i~~d~~G~l~v~~----~~~v~~~~~~-g~~~~~~~~~--~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~ 285 (296)
T 3e5z_A 215 VEPGKT-DGLRVDAGGLIWASA----GDGVHVLTPD-GDELGRVLTP--QT-TSNLCFGGPEGRTLYMTVSTEFWSIETN 285 (296)
T ss_dssp CSSSCC-CSEEEBTTSCEEEEE----TTEEEEECTT-SCEEEEEECS--SC-CCEEEEESTTSCEEEEEETTEEEEEECS
T ss_pred CCCCCC-CeEEECCCCCEEEEc----CCeEEEECCC-CCEEEEEECC--CC-ceeEEEECCCCCEEEEEcCCeEEEEEcc
Confidence 111111 1233 3478888766 3455555443 3322222222 22 2233342 45565555667899999999
Q ss_pred CCcEEE
Q 037345 327 TRALRD 332 (357)
Q Consensus 327 t~~~~~ 332 (357)
++++++
T Consensus 286 ~~~~~~ 291 (296)
T 3e5z_A 286 VRGLEH 291 (296)
T ss_dssp CCBCCC
T ss_pred cccccc
Confidence 999875
No 37
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=90.99 E-value=7.2 Score=33.76 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=79.5
Q ss_pred EEEEcCCCce-eecccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCccee-EecCCCCC--CCCCCe
Q 037345 182 ILHTLSTDSW-RYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAFH-VIKCPDNS--YFPNPI 257 (357)
Q Consensus 182 ~vyss~t~~W-~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~-~i~lP~~~--~~~~~~ 257 (357)
.+++..|++- +.++.. ..+. .-.+.-+|.+|..... ...|..+|+.+.+.. .++.+... ...-..
T Consensus 67 ~viD~~t~~~~~~i~~~---~~p~-----~i~~~~~g~lyv~~~~---~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~ 135 (328)
T 3dsm_A 67 FAIDINTFKEVGRITGF---TSPR-----YIHFLSDEKAYVTQIW---DYRIFIINPKTYEITGYIECPDMDMESGSTEQ 135 (328)
T ss_dssp EEEETTTCCEEEEEECC---SSEE-----EEEEEETTEEEEEEBS---CSEEEEEETTTTEEEEEEECTTCCTTTCBCCC
T ss_pred EEEECcccEEEEEcCCC---CCCc-----EEEEeCCCeEEEEECC---CCeEEEEECCCCeEEEEEEcCCccccCCCcce
Confidence 3899888765 223211 1111 1122358888887732 248999999998775 56665521 001123
Q ss_pred EEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEeeC-----------CeEEEEECC
Q 037345 258 LGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESNT-----------NQLLLYDPN 326 (357)
Q Consensus 258 l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~yd~~ 326 (357)
++..+|+|++.... ....+.++-++..+..+...... ...-+.+..+|.+++.... ..+..+|++
T Consensus 136 i~~~~~~lyv~~~~-~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 136 MVQYGKYVYVNCWS-YQNRILKIDTETDKVVDELTIGI---QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp EEEETTEEEEEECT-TCCEEEEEETTTTEEEEEEECSS---CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred EEEECCEEEEEcCC-CCCEEEEEECCCCeEEEEEEcCC---CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 44578888887642 14555555555444333322221 1223445567888777543 579999999
Q ss_pred CCcEEE-eee
Q 037345 327 TRALRD-VGL 335 (357)
Q Consensus 327 t~~~~~-v~~ 335 (357)
++++.+ +.+
T Consensus 212 t~~v~~~~~~ 221 (328)
T 3dsm_A 212 TFTVEKQFKF 221 (328)
T ss_dssp TTEEEEEEEC
T ss_pred CCeEEEEEec
Confidence 998864 454
No 38
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=89.79 E-value=7.9 Score=32.30 Aligned_cols=197 Identities=13% Similarity=0.111 Sum_probs=98.3
Q ss_pred EEecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcc
Q 037345 99 LLGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVS 178 (357)
Q Consensus 99 ~~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~ 178 (357)
+....+|-+.+.......++++||. ++...++.+... .. ..++.+|+.. ..- +..... ..
T Consensus 67 i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~--~~------~~~i~~~~~g-~l~---v~~~~~-------~~ 126 (300)
T 2qc5_A 67 LIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPD--SG------PYGITEGLNG-DIW---FTQLNG-------DR 126 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT--CC------EEEEEECSTT-CEE---EEETTT-------TE
T ss_pred EEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCC--CC------CccceECCCC-CEE---EEccCC-------Ce
Confidence 4444667777766544578899988 665544322111 11 4566777533 222 111111 13
Q ss_pred eEEEEEEcCCCceeecccCCcccccccCCCCCcceE--ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCC
Q 037345 179 TEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTY--LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNP 256 (357)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~ 256 (357)
.. .|+.. +.......... ... -.++. -+|.+|+.... ...|..+|. +.++..+.+|...... .
T Consensus 127 i~--~~~~~-g~~~~~~~~~~--~~~-----~~~i~~d~~g~l~v~~~~---~~~i~~~~~-~g~~~~~~~~~~~~~~-~ 191 (300)
T 2qc5_A 127 IG--KLTAD-GTIYEYDLPNK--GSY-----PAFITLGSDNALWFTENQ---NNSIGRITN-TGKLEEYPLPTNAAAP-V 191 (300)
T ss_dssp EE--EECTT-SCEEEEECSST--TCC-----EEEEEECTTSSEEEEETT---TTEEEEECT-TCCEEEEECSSTTCCE-E
T ss_pred EE--EECCC-CCEEEccCCCC--CCC-----ceeEEECCCCCEEEEecC---CCeEEEECC-CCcEEEeeCCCCCCCc-c
Confidence 22 66655 44433221100 100 12222 36787766543 247999999 6667666665433111 2
Q ss_pred eEEEE-CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCCcEEEee
Q 037345 257 ILGVY-DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTRALRDVG 334 (357)
Q Consensus 257 ~l~~~-~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~v~ 334 (357)
.+... +|.|++.... ...+.++-. ++.... ..+........-+.+..+|.+++... .+.+..||+ ++++..+.
T Consensus 192 ~i~~d~~g~l~v~~~~--~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~ 266 (300)
T 2qc5_A 192 GITSGNDGALWFVEIM--GNKIGRITT-TGEISE-YDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQ 266 (300)
T ss_dssp EEEECTTSSEEEEETT--TTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEE
T ss_pred eEEECCCCCEEEEccC--CCEEEEEcC-CCcEEE-EECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEE
Confidence 33333 6778876642 344444433 233332 22221111123344445677777654 578999999 56666664
Q ss_pred e
Q 037345 335 L 335 (357)
Q Consensus 335 ~ 335 (357)
+
T Consensus 267 ~ 267 (300)
T 2qc5_A 267 L 267 (300)
T ss_dssp C
T ss_pred C
Confidence 4
No 39
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=89.73 E-value=7.6 Score=31.99 Aligned_cols=189 Identities=10% Similarity=0.098 Sum_probs=95.8
Q ss_pred EEecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcc
Q 037345 99 LLGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVS 178 (357)
Q Consensus 99 ~~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~ 178 (357)
+.-..+|-+.+... ..+++++||.++....++.... .. ..++.+|+.. . + .+.....+ .
T Consensus 72 i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~---~~------p~~i~~~~~g-~--l-~v~~~~~~-------~ 130 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGL---NY------PEGLAVDTQG-A--V-YVADRGNN-------R 130 (270)
T ss_dssp EEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSC---SS------EEEEEECTTC-C--E-EEEEGGGT-------E
T ss_pred eEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCc---CC------CcceEECCCC-C--E-EEEECCCC-------E
Confidence 43344677766665 4578999998877655543221 11 4567777743 2 2 22222111 3
Q ss_pred eEEEEEEcCCCceeecccCCcccccccCCCCCcceEE--CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCC
Q 037345 179 TEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL--DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNP 256 (357)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~ 256 (357)
+.+|+.++......... .... -.++.+ +|.+|+.... ...|..||..+........... . .-.
T Consensus 131 --i~~~~~~~~~~~~~~~~---~~~~-----p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~-~-~p~ 195 (270)
T 1rwi_B 131 --VVKLAAGSKTQTVLPFT---GLND-----PDGVAVDNSGNVYVTDTD---NNRVVKLEAESNNQVVLPFTDI-T-APW 195 (270)
T ss_dssp --EEEECTTCCSCEECCCC---SCCS-----CCCEEECTTCCEEEEEGG---GTEEEEECTTTCCEEECCCSSC-C-SEE
T ss_pred --EEEEECCCceeEeeccc---cCCC-----ceeEEEeCCCCEEEEECC---CCEEEEEecCCCceEeecccCC-C-Cce
Confidence 33665555443222110 1110 223333 6887776643 2589999998876554322211 1 111
Q ss_pred eEEEE-CCeEEEEEecCCCCeEEEEEEcC-CeeEEEEEEccCCceeEE--EEEeeCCcEEEEee-CCeEEEEECCCCcE
Q 037345 257 ILGVY-DNSLHFLDFDRSESCFEKWVMKE-GSWTKQLSVGPILGVLRA--LEFWKNGSFFIESN-TNQLLLYDPNTRAL 330 (357)
Q Consensus 257 ~l~~~-~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~--~~~~~~~~i~~~~~-~~~~~~yd~~t~~~ 330 (357)
.+... +|.|++... ....+.+|-.+. .... +. ......| +.+..+|.+++... ++.+..|++..++.
T Consensus 196 ~i~~d~~g~l~v~~~--~~~~v~~~~~~~~~~~~----~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEH--NTNQVVKLLAGSTTSTV----LP-FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEECTTCCEEEEET--TTSCEEEECTTCSCCEE----CC-CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred EEEECCCCCEEEEEC--CCCcEEEEcCCCCccee----ec-cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 23332 567777665 244555554443 2111 11 1122233 44445677777654 67888888876553
No 40
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=88.36 E-value=8.5 Score=33.83 Aligned_cols=111 Identities=11% Similarity=0.093 Sum_probs=63.3
Q ss_pred CcceEECceEEEEEccCCCcCEEEEEECCCccee-EecCCCCC-------CCCCCeEEEECCeEEEEEecCCCCeEEEEE
Q 037345 210 SENTYLDRICYWIAWRYNNCQEILSFHMRDEAFH-VIKCPDNS-------YFPNPILGVYDNSLHFLDFDRSESCFEKWV 281 (357)
Q Consensus 210 ~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~-~i~lP~~~-------~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~ 281 (357)
..++..+|.+|.....+ .|.+||.++.+.. ..+++... ..........+|.+++... ...+..+-
T Consensus 47 ~~p~v~~~~v~~~~~~g----~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a~d 119 (376)
T 3q7m_A 47 LHPALADNVVYAADRAG----LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---KAQVYALN 119 (376)
T ss_dssp CCCEEETTEEEEECTTS----EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---TSEEEEEE
T ss_pred eccEEECCEEEEEcCCC----eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---CCEEEEEE
Confidence 47888999999876554 8999999765443 23443221 0111234566777777553 23343333
Q ss_pred EcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcEEE
Q 037345 282 MKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESNTNQLLLYDPNTRALRD 332 (357)
Q Consensus 282 l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~ 332 (357)
.+. ..|... ... .....|.. .++.+++...++.++.+|.+|++...
T Consensus 120 ~~tG~~~W~~~--~~~-~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 120 TSDGTVAWQTK--VAG-EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKW 167 (376)
T ss_dssp TTTCCEEEEEE--CSS-CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEe--CCC-ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 333 456442 221 11122222 35667776667889999999887654
No 41
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=88.10 E-value=5.8 Score=33.47 Aligned_cols=111 Identities=11% Similarity=0.062 Sum_probs=66.9
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcce-eEecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAF-HVIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSV 293 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i 293 (357)
.+|.+|--++.. +...|..+|+++.+. ..+++|... +..-+...+++|+++... +.. +|+.+-.+-.++.+|
T Consensus 51 ~~~~LyestG~~-g~S~v~~vD~~Tgkv~~~~~l~~~~--FgeGit~~g~~ly~ltw~--~~~--v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 51 RNGYFYESTGLN-GRSSIRKVDIESGKTLQQIELGKRY--FGEGISDWKDKIVGLTWK--NGL--GFVWNIRNLRQVRSF 123 (262)
T ss_dssp ETTEEEEEEEET-TEEEEEEECTTTCCEEEEEECCTTC--CEEEEEEETTEEEEEESS--SSE--EEEEETTTCCEEEEE
T ss_pred ECCEEEEECCCC-CCceEEEEECCCCcEEEEEecCCcc--ceeEEEEeCCEEEEEEee--CCE--EEEEECccCcEEEEE
Confidence 467777665542 345899999998876 456777543 222356678889988752 343 455554333444455
Q ss_pred ccCCceeEEEEEeeCCc-EEEEeeCCeEEEEECCCCcE-EEeee
Q 037345 294 GPILGVLRALEFWKNGS-FFIESNTNQLLLYDPNTRAL-RDVGL 335 (357)
Q Consensus 294 ~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~yd~~t~~~-~~v~~ 335 (357)
... ....++..+++ +++...+..+..+|++|.+. +.|.+
T Consensus 124 ~~~---~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 124 NYD---GEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp ECS---SCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred ECC---CCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 432 13345555555 45544467899999998665 44433
No 42
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=87.62 E-value=15 Score=32.79 Aligned_cols=196 Identities=10% Similarity=0.107 Sum_probs=97.0
Q ss_pred cccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEE
Q 037345 102 NCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEV 181 (357)
Q Consensus 102 s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 181 (357)
|.+++|.+... ..++|||..|++...+-...... .. ...+.+.+. +.|-+.+ ..+ ..+.
T Consensus 114 S~~n~lAvgld--~tV~lWd~~tg~~~~~~~~~~~~-~~------V~sv~fspd-g~~lasg---s~D-------g~v~- 172 (420)
T 4gga_A 114 SSGNVLAVALD--NSVYLWSASSGDILQLLQMEQPG-EY------ISSVAWIKE-GNYLAVG---TSS-------AEVQ- 172 (420)
T ss_dssp CTTSEEEEEET--TEEEEEETTTCCEEEEEECCSTT-CC------EEEEEECTT-SSEEEEE---ETT-------SCEE-
T ss_pred CCCCEEEEEeC--CEEEEEECCCCCEEEEEEecCCC-Cc------EEEEEECCC-CCEEEEE---ECC-------CeEE-
Confidence 45667665543 37899999999876654332211 11 456777663 3443332 222 2444
Q ss_pred EEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEE-E
Q 037345 182 ILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILG-V 260 (357)
Q Consensus 182 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~ 260 (357)
+++..+++-...-.. .-. ...++..+|.+-..... ...+..+|..........+....... ..+. .
T Consensus 173 -iWd~~~~~~~~~~~~---h~~-----~v~~~s~~~~~l~sgs~---d~~i~~~d~~~~~~~~~~~~~h~~~~-~~~~~~ 239 (420)
T 4gga_A 173 -LWDVQQQKRLRNMTS---HSA-----RVGSLSWNSYILSSGSR---SGHIHHHDVRVAEHHVATLSGHSQEV-CGLRWA 239 (420)
T ss_dssp -EEETTTTEEEEEECC---CSS-----CEEEEEEETTEEEEEET---TSEEEEEETTSSSCEEEEEECCSSCE-EEEEEC
T ss_pred -EEEcCCCcEEEEEeC---CCC-----ceEEEeeCCCEEEEEeC---CCceeEeeecccceeeEEecccccce-eeeeec
Confidence 999887643211110 000 02334455544333322 24677777776544433332221111 1121 2
Q ss_pred ECCeEEEEEecCCCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEee-CCcEEEEe---eCCeEEEEECCCCcEEEe
Q 037345 261 YDNSLHFLDFDRSESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWK-NGSFFIES---NTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 261 ~~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~-~~~i~~~~---~~~~~~~yd~~t~~~~~v 333 (357)
.+|+..+... .+..+.||-... ..+...............+.+.. ++.++... .|+.+..||+++++....
T Consensus 240 ~~g~~l~s~~--~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 240 PDGRHLASGG--NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 316 (420)
T ss_dssp TTSSEEEEEE--TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE
T ss_pred CCCCeeeeee--ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee
Confidence 2455554444 467888998876 22222222222222223333333 34454442 267899999998877554
No 43
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=87.48 E-value=11 Score=31.93 Aligned_cols=109 Identities=11% Similarity=0.132 Sum_probs=65.7
Q ss_pred ceEEEEEccCCCcCEEEEEECCCcce-eEecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEcc
Q 037345 217 RICYWIAWRYNNCQEILSFHMRDEAF-HVIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGP 295 (357)
Q Consensus 217 G~lyw~~~~~~~~~~i~~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~ 295 (357)
|.+|.-.+.. ....|..+|+.+.+. ..+++|..... ..+...+++|+++.. .+.. +++.+-.+-..+.+|..
T Consensus 32 g~Lyvstg~~-~~s~v~~iD~~tg~v~~~i~l~~~~fg--eGi~~~g~~lyv~t~--~~~~--v~viD~~t~~v~~~i~~ 104 (266)
T 2iwa_A 32 DTLFESTGLY-GRSSVRQVALQTGKVENIHKMDDSYFG--EGLTLLNEKLYQVVW--LKNI--GFIYDRRTLSNIKNFTH 104 (266)
T ss_dssp TEEEEEECST-TTCEEEEEETTTCCEEEEEECCTTCCE--EEEEEETTEEEEEET--TCSE--EEEEETTTTEEEEEEEC
T ss_pred CeEEEECCCC-CCCEEEEEECCCCCEEEEEecCCCcce--EEEEEeCCEEEEEEe--cCCE--EEEEECCCCcEEEEEEC
Confidence 6777766431 246899999998776 45677654311 234555778888875 2344 55555433344555643
Q ss_pred CCceeEEEEEeeCCc-EEEEeeCCeEEEEECCCCcE-EEee
Q 037345 296 ILGVLRALEFWKNGS-FFIESNTNQLLLYDPNTRAL-RDVG 334 (357)
Q Consensus 296 ~~~~~~~~~~~~~~~-i~~~~~~~~~~~yd~~t~~~-~~v~ 334 (357)
. .....++..+|+ +|+...++.+..+|++|.+. +.+.
T Consensus 105 g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 105 Q--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp C--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred C--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence 2 112344555544 66655567899999999775 4443
No 44
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=87.39 E-value=13 Score=31.68 Aligned_cols=190 Identities=12% Similarity=0.082 Sum_probs=96.1
Q ss_pred cceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEE
Q 037345 104 NGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVIL 183 (357)
Q Consensus 104 ~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 183 (357)
.+.+++.......+.++|+.|++....-..+. . .. ++.+++..+ + ++... ... .. +.+
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~----~-----~~-~~~~s~dg~-~-l~~~~-~~~-------~~--i~~ 66 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGY----D-----FV-DTAITSDCS-N-VVVTS-DFC-------QT--LVQ 66 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCC----C-----EE-EEEECSSSC-E-EEEEE-STT-------CE--EEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccC----C-----cc-eEEEcCCCC-E-EEEEe-CCC-------Ce--EEE
Confidence 44555555444578999999988754322221 1 13 667766543 2 22221 111 13 448
Q ss_pred EEcCCCce--eecccCCcccccccCCCCC-cceEECceEEEEEccCCCcCEEEEEECCCcceeE-ecCCCCCCCCCCeEE
Q 037345 184 HTLSTDSW--RYLKANELSDYSFLGGQQS-ENTYLDRICYWIAWRYNNCQEILSFHMRDEAFHV-IKCPDNSYFPNPILG 259 (357)
Q Consensus 184 yss~t~~W--~~~~~~~~~~~~~~~~~~~-~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~-i~lP~~~~~~~~~l~ 259 (357)
++..++.- +.+.... .+. . -.+.-+|..-+..........|..+|+.+.+... ++..... ..+.
T Consensus 67 ~d~~~~~~~~~~~~~~~---~~~-----~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~----~~~~ 134 (331)
T 3u4y_A 67 IETQLEPPKVVAIQEGQ---SSM-----ADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDA----VGIA 134 (331)
T ss_dssp EECSSSSCEEEEEEECS---SCC-----CCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTE----EEEE
T ss_pred EECCCCceeEEecccCC---CCc-----cceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCc----cceE
Confidence 88887764 1111110 010 1 1222345433333222112289999998876533 3332211 1233
Q ss_pred -EECCe-EEEEEecCCCCe-EEEEEEcC-CeeEE--EEEEccCCceeEEEEEeeCCc-EEEEee-CCeEEEEECCCCcE
Q 037345 260 -VYDNS-LHFLDFDRSESC-FEKWVMKE-GSWTK--QLSVGPILGVLRALEFWKNGS-FFIESN-TNQLLLYDPNTRAL 330 (357)
Q Consensus 260 -~~~g~-L~l~~~~~~~~~-~~iW~l~~-~~W~~--~~~i~~~~~~~~~~~~~~~~~-i~~~~~-~~~~~~yd~~t~~~ 330 (357)
.-+|+ |++... .... +.+|.++. +.-.. ...+.. .....-+.+..+|+ +++... ++.+..||+++++.
T Consensus 135 ~spdg~~l~~~~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 135 ISPNGNGLILIDR--SSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp ECTTSSCEEEEEE--TTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred ECCCCCEEEEEec--CCCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 23666 665555 3345 99999987 32211 122222 12234556667777 555443 67899999998885
No 45
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=87.31 E-value=13 Score=32.64 Aligned_cols=112 Identities=10% Similarity=0.042 Sum_probs=59.8
Q ss_pred CcceEECceEEEEEccCCCcCEEEEEECCCccee-EecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcC--Ce
Q 037345 210 SENTYLDRICYWIAWRYNNCQEILSFHMRDEAFH-VIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKE--GS 286 (357)
Q Consensus 210 ~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~-~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~--~~ 286 (357)
..++..+|.+|.-...+ .|.++|.++.+.. ..+++.... ......+|.+++... ...+..+-.++ ..
T Consensus 97 ~~~~~~~~~v~v~~~~g----~l~a~d~~tG~~~W~~~~~~~~~---~~p~~~~~~v~v~~~---~g~l~~~d~~tG~~~ 166 (376)
T 3q7m_A 97 GGVTVSGGHVYIGSEKA----QVYALNTSDGTVAWQTKVAGEAL---SRPVVSDGLVLIHTS---NGQLQALNEADGAVK 166 (376)
T ss_dssp EEEEEETTEEEEEETTS----EEEEEETTTCCEEEEEECSSCCC---SCCEEETTEEEEECT---TSEEEEEETTTCCEE
T ss_pred cCceEeCCEEEEEcCCC----EEEEEECCCCCEEEEEeCCCceE---cCCEEECCEEEEEcC---CCeEEEEECCCCcEE
Confidence 34567788888876554 8999999865543 234443321 123445666665432 23333322222 34
Q ss_pred eEEEEEEccC--CceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcEEEe
Q 037345 287 WTKQLSVGPI--LGVLRALEFWKNGSFFIESNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 287 W~~~~~i~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v 333 (357)
|.....-... .....|.. .++.+++-..++.++.+|+++++...-
T Consensus 167 W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 167 WTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp EEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEE
T ss_pred EEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEE
Confidence 6543211110 00112222 246666655578899999998887543
No 46
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=86.96 E-value=6.8 Score=33.83 Aligned_cols=103 Identities=10% Similarity=-0.017 Sum_probs=59.0
Q ss_pred CEEEEEECCCcceeEecCCCCCCCCCCeEE-EECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeC
Q 037345 230 QEILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKN 308 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~ 308 (357)
..+..+|.++.++..+......... ..++ .-+|+|+++........+.+|-++.+++.....+.....-..-+++..+
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p-~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd 96 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNP-TYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA 96 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCC-CCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCc-ceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC
Confidence 4678888888888765432221111 1233 3478866655422356888898876666665553321122334566677
Q ss_pred CcEEEE-e-eCCeEEEEECC-CCcEEEe
Q 037345 309 GSFFIE-S-NTNQLLLYDPN-TRALRDV 333 (357)
Q Consensus 309 ~~i~~~-~-~~~~~~~yd~~-t~~~~~v 333 (357)
|+.++. . .++.+..||+. +++.+.+
T Consensus 97 g~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 97 RQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp TTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 775444 3 35678899984 4455544
No 47
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=86.23 E-value=14 Score=31.02 Aligned_cols=197 Identities=11% Similarity=0.064 Sum_probs=102.8
Q ss_pred EEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEc
Q 037345 107 FCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTL 186 (357)
Q Consensus 107 ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss 186 (357)
++.......+++++||.++ ...+..+.. . ..++.+|+... . + +..... .... +|+.
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~~----~------~~~l~~~~dg~-l--~-v~~~~~-------~~i~--~~d~ 97 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPSH----H------QNGHCLNKQGH-L--I-ACSHGL-------RRLE--RQRE 97 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSCS----S------EEEEEECTTCC-E--E-EEETTT-------TEEE--EECS
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCCC----C------cceeeECCCCc-E--E-EEecCC-------CeEE--EEcC
Confidence 4444433347899999988 444433211 1 45677777442 2 2 221111 2434 8888
Q ss_pred CCCceeecccCCcccccccCCCCCcceEECceEEEEEcc--------------CCCcCEEEEEECCCcceeEecCCCCCC
Q 037345 187 STDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWR--------------YNNCQEILSFHMRDEAFHVIKCPDNSY 252 (357)
Q Consensus 187 ~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~--------------~~~~~~i~~fD~~~e~~~~i~lP~~~~ 252 (357)
.+++.+.+..... ..+.... ..-.+.-+|.+|..... ......|..+|.. .+...+.-....
T Consensus 98 ~~g~~~~~~~~~~-~~~~~~~-~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~- 173 (296)
T 3e5z_A 98 PGGEWESIADSFE-GKKLNSP-NDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK- 173 (296)
T ss_dssp TTCCEEEEECEET-TEECCCC-CCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS-
T ss_pred CCCcEEEEeeccC-CCCCCCC-CCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC-
Confidence 7887765432111 1110000 01122336887764310 0012478999988 555544211111
Q ss_pred CCCCeEEE-ECCeEEEEEecCCCCeEEEEEEcC-Cee-EEEEEEccCCceeEEEEEeeCCcEEEEeeCCeEEEEECCCCc
Q 037345 253 FPNPILGV-YDNSLHFLDFDRSESCFEKWVMKE-GSW-TKQLSVGPILGVLRALEFWKNGSFFIESNTNQLLLYDPNTRA 329 (357)
Q Consensus 253 ~~~~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~-~~W-~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~ 329 (357)
. ..++. -+|++.++.. ....+.+|-++. +.. .....+........-+.+..+|.+++.. ++.+..||++.+.
T Consensus 174 -~-~gi~~s~dg~~lv~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~ 248 (296)
T 3e5z_A 174 -P-NGLAFLPSGNLLVSDT--GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDE 248 (296)
T ss_dssp -E-EEEEECTTSCEEEEET--TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCE
T ss_pred -C-ccEEECCCCCEEEEeC--CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCE
Confidence 0 12332 3677553333 456788888874 554 3333332111223345666778888877 8899999999888
Q ss_pred EEEeeec
Q 037345 330 LRDVGLG 336 (357)
Q Consensus 330 ~~~v~~~ 336 (357)
++.+..+
T Consensus 249 ~~~~~~~ 255 (296)
T 3e5z_A 249 LGRVLTP 255 (296)
T ss_dssp EEEEECS
T ss_pred EEEEECC
Confidence 8877654
No 48
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=85.71 E-value=17 Score=31.49 Aligned_cols=114 Identities=18% Similarity=0.123 Sum_probs=65.5
Q ss_pred ECce-EEEEEccCCCcCEEEEEECCCcceeEec----CCCCCCCCCCeEE-EECCeEEEEEecCC-CCeEEEEEEcC--C
Q 037345 215 LDRI-CYWIAWRYNNCQEILSFHMRDEAFHVIK----CPDNSYFPNPILG-VYDNSLHFLDFDRS-ESCFEKWVMKE--G 285 (357)
Q Consensus 215 ~~G~-lyw~~~~~~~~~~i~~fD~~~e~~~~i~----lP~~~~~~~~~l~-~~~g~L~l~~~~~~-~~~~~iW~l~~--~ 285 (357)
-+|. +|..... ...|..||+.+.++..+. .|...... ..+. .-+|+..++... . ...+.||.++. +
T Consensus 220 pdg~~l~v~~~~---~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~-~~i~~spdg~~l~v~~~-~~~~~i~v~~~~~~~g 294 (361)
T 3scy_A 220 SDGKFAYLINEI---GGTVIAFRYADGMLDEIQTVAADTVNAQGS-GDIHLSPDGKYLYASNR-LKADGVAIFKVDETNG 294 (361)
T ss_dssp TTSSEEEEEETT---TCEEEEEEEETTEEEEEEEEESCSSCCCCE-EEEEECTTSSEEEEEEC-SSSCEEEEEEECTTTC
T ss_pred CCCCEEEEEcCC---CCeEEEEEecCCceEEeEEEecCCCCCCCc-ccEEECCCCCEEEEECC-CCCCEEEEEEEcCCCC
Confidence 3665 5554432 247888888877765432 22221111 1233 236774333332 3 57899999973 6
Q ss_pred eeEEEEEEccCCceeEEEEEeeCCcEEEEee--CCeEEE--EECCCCcEEEee
Q 037345 286 SWTKQLSVGPILGVLRALEFWKNGSFFIESN--TNQLLL--YDPNTRALRDVG 334 (357)
Q Consensus 286 ~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~--yd~~t~~~~~v~ 334 (357)
.+.....+.. .....-+.+..+|+.++... ++.+.. +|+++++++.+.
T Consensus 295 ~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 295 TLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp CEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred cEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 6666666654 22334566777787555443 455555 688899998883
No 49
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=85.52 E-value=17 Score=31.33 Aligned_cols=195 Identities=11% Similarity=0.051 Sum_probs=99.8
Q ss_pred ccceEEEeecCCCeEEEEeccccch-hcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEE
Q 037345 103 CNGLFCLHDKNSNRISIWNLATREF-RALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEV 181 (357)
Q Consensus 103 ~~GLll~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 181 (357)
.++.+.+.......+.|+|+.|++. ..+|... . ..++.+++. . +++.... .. ..+.
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~-----~------p~~i~~~~~--g-~lyv~~~-~~-------~~v~- 108 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFT-----S------PRYIHFLSD--E-KAYVTQI-WD-------YRIF- 108 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCS-----S------EEEEEEEET--T-EEEEEEB-SC-------SEEE-
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCC-----C------CcEEEEeCC--C-eEEEEEC-CC-------CeEE-
Confidence 3566655555445789999999886 4464321 1 344555433 2 3333221 11 2444
Q ss_pred EEEEcCCCcee-ecccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCccee-EecCCCCCCCCCCeEE
Q 037345 182 ILHTLSTDSWR-YLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAFH-VIKCPDNSYFPNPILG 259 (357)
Q Consensus 182 ~vyss~t~~W~-~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~-~i~lP~~~~~~~~~l~ 259 (357)
+++..+++-. .++.... .-.. ..+..-+.-+|.+|...... ...|..+|+.+.+.. .++...... ....
T Consensus 109 -~iD~~t~~~~~~i~~g~~-~~~~--~~p~~i~~~~~~lyv~~~~~--~~~v~viD~~t~~~~~~i~~g~~p~---~i~~ 179 (328)
T 3dsm_A 109 -IINPKTYEITGYIECPDM-DMES--GSTEQMVQYGKYVYVNCWSY--QNRILKIDTETDKVVDELTIGIQPT---SLVM 179 (328)
T ss_dssp -EEETTTTEEEEEEECTTC-CTTT--CBCCCEEEETTEEEEEECTT--CCEEEEEETTTTEEEEEEECSSCBC---CCEE
T ss_pred -EEECCCCeEEEEEEcCCc-cccC--CCcceEEEECCEEEEEcCCC--CCEEEEEECCCCeEEEEEEcCCCcc---ceEE
Confidence 8888887532 2222110 0000 00122233677888776421 248999999987764 455432211 1122
Q ss_pred EECCeEEEEEecC-C-------CCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcEE
Q 037345 260 VYDNSLHFLDFDR-S-------ESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESNTNQLLLYDPNTRALR 331 (357)
Q Consensus 260 ~~~g~L~l~~~~~-~-------~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~ 331 (357)
..+|++++++... . ...+.++-.+..+-.+...++.. ....-+++..+++.++..+. .++.+|++++++.
T Consensus 180 ~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g-~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 180 DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG-DWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVP 257 (328)
T ss_dssp CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT-CCCEEEEECTTSCEEEEESS-SEEEEETTCSSCC
T ss_pred cCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC-CCceeEEEecCCCEEEEEcc-EEEEEECCCCcee
Confidence 3468888776531 0 13344433333443333333211 12345566655665544434 8999999998874
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=84.71 E-value=18 Score=31.01 Aligned_cols=72 Identities=15% Similarity=0.164 Sum_probs=46.7
Q ss_pred ECCe-EEEEEecCCCCeEEEEEEcC-CeeEEEEEEccCCceeEEEEEeeCCcEEEEe-e-CCeEEEE--ECCCCcEEEee
Q 037345 261 YDNS-LHFLDFDRSESCFEKWVMKE-GSWTKQLSVGPILGVLRALEFWKNGSFFIES-N-TNQLLLY--DPNTRALRDVG 334 (357)
Q Consensus 261 ~~g~-L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~-~~~~~~y--d~~t~~~~~v~ 334 (357)
-+|+ |++... ....+.||-++. +.......+........-+.+..+|+.++.. . ++.+..| |.++++++.++
T Consensus 249 pdG~~l~v~~~--~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 249 HDGHFLYVSNR--GYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp TTSCEEEEEEE--TTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred CCCCEEEEEeC--CCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 3676 555554 467899999986 5555555554322223456677778754443 3 3667777 88899999884
No 51
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=83.82 E-value=24 Score=31.64 Aligned_cols=59 Identities=15% Similarity=0.135 Sum_probs=32.4
Q ss_pred CCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcEEE
Q 037345 274 ESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESNTNQLLLYDPNTRALRD 332 (357)
Q Consensus 274 ~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~ 332 (357)
...+.||-...+.-.....-.....+.....+..+|.++....++.+..||+++++.+|
T Consensus 377 ~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 377 LRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred CCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 35688887665322221111122234444556677888777778899999999998775
No 52
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=83.44 E-value=12 Score=31.54 Aligned_cols=105 Identities=9% Similarity=-0.059 Sum_probs=63.9
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCccee-EecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFH-VIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSV 293 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~-~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i 293 (357)
.+|.||.-++.. ..|..+|+++.+.. .+ +|... +.--+...+++|+++... +. .+|+.+-.+=.++.+|
T Consensus 63 ~~~~Ly~stG~~---g~v~~iD~~Tgkv~~~~-l~~~~--FgeGit~~g~~Ly~ltw~--~~--~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 63 HQGHFFESTGHQ---GTLRQLSLESAQPVWME-RLGNI--FAEGLASDGERLYQLTWT--EG--LLFTWSGMPPQRERTT 132 (268)
T ss_dssp ETTEEEEEETTT---TEEEECCSSCSSCSEEE-ECTTC--CEEEEEECSSCEEEEESS--SC--EEEEEETTTTEEEEEE
T ss_pred ECCEEEEEcCCC---CEEEEEECCCCcEEeEE-CCCCc--ceeEEEEeCCEEEEEEcc--CC--EEEEEECCcCcEEEEE
Confidence 456777666553 35999999988774 45 66543 212356668889988652 33 3555554333444555
Q ss_pred ccCCceeEEEEEeeCCc-EEEEeeCCeEEEEECCCCcEEE
Q 037345 294 GPILGVLRALEFWKNGS-FFIESNTNQLLLYDPNTRALRD 332 (357)
Q Consensus 294 ~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~yd~~t~~~~~ 332 (357)
... ....++..+++ +|+...+..+..+|++|.+..+
T Consensus 133 ~~~---~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 133 RYS---GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVG 169 (268)
T ss_dssp ECS---SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEE
T ss_pred eCC---CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEE
Confidence 432 12345555555 4554447789999999976643
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=83.32 E-value=13 Score=32.07 Aligned_cols=97 Identities=11% Similarity=0.118 Sum_probs=57.6
Q ss_pred CEEEEEECCCcceeEec-CCCCCCCCCCeEE-EECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEee
Q 037345 230 QEILSFHMRDEAFHVIK-CPDNSYFPNPILG-VYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWK 307 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~-lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 307 (357)
..|..+|+.+.++..+. ++.....- ..+. ..+|++.+++. .+..+.||-++...+.....+........-+.+..
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 106 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQV-TGVDWAPDSNRIVTCG--TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP 106 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCE-EEEEEETTTTEEEEEE--TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcc-cEEEEeCCCCEEEEEc--CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC
Confidence 47888888887654332 22111110 1222 22566555554 46789999998877776665543333344555556
Q ss_pred CCcEEEE-eeCCeEEEEECCCCc
Q 037345 308 NGSFFIE-SNTNQLLLYDPNTRA 329 (357)
Q Consensus 308 ~~~i~~~-~~~~~~~~yd~~t~~ 329 (357)
++..++. ..++.+..||+++++
T Consensus 107 ~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 107 NEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp TSSEEEEEETTSSEEEEEEETTT
T ss_pred CCCEEEEEeCCCEEEEEEecCCC
Confidence 6666555 447788899988876
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=80.97 E-value=31 Score=30.90 Aligned_cols=196 Identities=9% Similarity=0.084 Sum_probs=90.3
Q ss_pred cceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEE
Q 037345 104 NGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVIL 183 (357)
Q Consensus 104 ~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 183 (357)
++-++........+.|||..+++...+-.... +. .....+.+.|..+.+-+.+ ..+ ..+. +
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~g-H~------~~V~~l~f~p~~~~~l~s~---s~D-------~~v~--i 191 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIG-AG------GSITGLKFNPLNTNQFYAS---SME-------GTTR--L 191 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCS-SS------CCCCEEEECSSCTTEEEEE---CSS-------SCEE--E
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccC-CC------CCEEEEEEeCCCCCEEEEE---eCC-------CEEE--E
Confidence 44333333333468999998887543322211 11 1155677777655543222 122 2444 8
Q ss_pred EEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEE--
Q 037345 184 HTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVY-- 261 (357)
Q Consensus 184 yss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~-- 261 (357)
++.+++.-+.+.......... . .-...-+|.+...... ...|..+|+.++....+.. +.....-+..
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~l~~g~~---dg~i~~wd~~~~~~~~~~~----h~~~v~~v~~~p 260 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWF-C---SLDVSASSRMVVTGDN---VGNVILLNMDGKELWNLRM----HKKKVTHVALNP 260 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCC-C---CEEEETTTTEEEEECS---SSBEEEEESSSCBCCCSBC----CSSCEEEEEECT
T ss_pred eeccCCceeEEeccCCCCccE-E---EEEECCCCCEEEEEeC---CCcEeeeccCcceeEEEec----ccceEEeeeecC
Confidence 888776554433211100100 0 1111224444433332 2478888887654332211 1111222222
Q ss_pred CCe-EEEEEecCCCCeEEEEEEcCCeeEEEEEE-ccCCceeEEEEEeeCCcEEEE-eeCCeEEEEECCCCcEE
Q 037345 262 DNS-LHFLDFDRSESCFEKWVMKEGSWTKQLSV-GPILGVLRALEFWKNGSFFIE-SNTNQLLLYDPNTRALR 331 (357)
Q Consensus 262 ~g~-L~l~~~~~~~~~~~iW~l~~~~W~~~~~i-~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~ 331 (357)
+|. +.+.+. .+..+.||-+....-...... .....-..-+.+..+|..++. ..++.+..||+++.+..
T Consensus 261 ~~~~~~~s~s--~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 261 CCDWFLATAS--VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp TCSSEEEEEE--TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred CCceEEEEec--CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence 344 443343 467889998775110100000 000111223334456666554 44788999999876543
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=80.93 E-value=27 Score=30.22 Aligned_cols=96 Identities=15% Similarity=0.006 Sum_probs=47.2
Q ss_pred CEEEEEECCCcc----eeEecCCCCCCCCCCeEEE-ECCeEEEEEecCCCCeEEEEEEcC---------Ce-------eE
Q 037345 230 QEILSFHMRDEA----FHVIKCPDNSYFPNPILGV-YDNSLHFLDFDRSESCFEKWVMKE---------GS-------WT 288 (357)
Q Consensus 230 ~~i~~fD~~~e~----~~~i~lP~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~---------~~-------W~ 288 (357)
..|..+|+.+.+ ...+..|... .-..+.. -+|++.+++. .+..+.||-++. .. -.
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3dwl_C 122 RVISVCYFEQENDWWVSKHLKRPLRS--TILSLDWHPNNVLLAAGC--ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNT 197 (377)
T ss_dssp SCEEECCC-----CCCCEEECSSCCS--CEEEEEECTTSSEEEEEE--SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEE
T ss_pred CeEEEEEECCcccceeeeEeecccCC--CeEEEEEcCCCCEEEEEe--CCCEEEEEEEEecccCCCccccccccccchhh
Confidence 367777877664 2333332111 1012222 2566555544 357899999863 11 12
Q ss_pred EEEEEccCCceeEEEEEeeCCcEEEE-eeCCeEEEEECCCCcE
Q 037345 289 KQLSVGPILGVLRALEFWKNGSFFIE-SNTNQLLLYDPNTRAL 330 (357)
Q Consensus 289 ~~~~i~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~ 330 (357)
....+. ......-+.+..++..++. ..++.+..||+++++.
T Consensus 198 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 198 VCAEYP-SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEECCC-CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred hhhccc-CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 222221 1122344555566665554 4578899999998875
No 56
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=79.83 E-value=20 Score=34.72 Aligned_cols=115 Identities=10% Similarity=0.095 Sum_probs=62.8
Q ss_pred CcceEECceEEEEEccCCCcCEEEEEECCCc--ceeEe-cCCCCC------CCCCCeEEEECCeEEEEEecCCCCeEEEE
Q 037345 210 SENTYLDRICYWIAWRYNNCQEILSFHMRDE--AFHVI-KCPDNS------YFPNPILGVYDNSLHFLDFDRSESCFEKW 280 (357)
Q Consensus 210 ~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e--~~~~i-~lP~~~------~~~~~~l~~~~g~L~l~~~~~~~~~~~iW 280 (357)
..++..+|.+|.....+ .+.++|..+. .|+.- ..+... ......+...+|++++.+. ...+..+
T Consensus 60 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~l~al 132 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS----RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL---DGRLIAL 132 (668)
T ss_dssp CCCEEETTEEEEEEGGG----EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT---TSEEEEE
T ss_pred cCCEEECCEEEEECCCC----eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC---CCEEEEE
Confidence 67888999999988655 8999998754 45532 122110 0011234556777766543 2333333
Q ss_pred EEcC--CeeEEEEEEccC-Cce-eEEEEEeeCCcEEEEee------CCeEEEEECCCCcEEEe
Q 037345 281 VMKE--GSWTKQLSVGPI-LGV-LRALEFWKNGSFFIESN------TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 281 ~l~~--~~W~~~~~i~~~-~~~-~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~v 333 (357)
-.+. ..|.....-... ..+ ..|+. .++.+|+-.. ++.++.||.+|++...-
T Consensus 133 D~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 133 DAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp ETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 2223 457654211000 011 23332 3456666433 36899999999987543
No 57
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=79.35 E-value=19 Score=34.08 Aligned_cols=111 Identities=6% Similarity=0.038 Sum_probs=62.5
Q ss_pred CcceEECceEEEEEc-cCCCcCEEEEEEC-CC--cceeEecCCCCC--------CCCCCeEEEECCeEEEEEecCCCCeE
Q 037345 210 SENTYLDRICYWIAW-RYNNCQEILSFHM-RD--EAFHVIKCPDNS--------YFPNPILGVYDNSLHFLDFDRSESCF 277 (357)
Q Consensus 210 ~~~v~~~G~lyw~~~-~~~~~~~i~~fD~-~~--e~~~~i~lP~~~--------~~~~~~l~~~~g~L~l~~~~~~~~~~ 277 (357)
..++..+|.+|.... .+ .+.++|. .+ +.|+. +++... ......++..+|++++... ...
T Consensus 56 ~~P~v~~g~vyv~~~~~~----~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~- 126 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPN----NTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA---NGH- 126 (571)
T ss_dssp SCCEEETTEEEEECSTTT----CEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSE-
T ss_pred cccEEECCEEEEEeCCCC----EEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC---CCE-
Confidence 667889999998876 43 7999998 54 34553 332210 0111234566777776543 223
Q ss_pred EEEEEcC----CeeEEEEEEcc-CCce-eEEEEEeeCCcEEEEee------CCeEEEEECCCCcEEE
Q 037345 278 EKWVMKE----GSWTKQLSVGP-ILGV-LRALEFWKNGSFFIESN------TNQLLLYDPNTRALRD 332 (357)
Q Consensus 278 ~iW~l~~----~~W~~~~~i~~-~~~~-~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~ 332 (357)
+..++- ..|.....-.. ...+ ..|+. .++.+|+... ++.++.||.+|++...
T Consensus 127 -l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 127 -LLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp -EEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred -EEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 344442 45665321100 0011 23332 2566666544 5789999999988764
No 58
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=78.45 E-value=23 Score=30.13 Aligned_cols=113 Identities=10% Similarity=0.104 Sum_probs=59.9
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEE-ECCeEEEEEecCCCCeEEEEEEcC-CeeEEEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGV-YDNSLHFLDFDRSESCFEKWVMKE-GSWTKQLS 292 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~ 292 (357)
-+|.+||..... ..|..+|+++.++..+..+... .-..+.. .+|+|.+.........-.|+.++. ..... ..
T Consensus 54 ~~g~l~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~--~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-~~ 127 (333)
T 2dg1_A 54 RQGQLFLLDVFE---GNIFKINPETKEIKRPFVSHKA--NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-DI 127 (333)
T ss_dssp TTSCEEEEETTT---CEEEEECTTTCCEEEEEECSSS--SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-EE
T ss_pred CCCCEEEEECCC---CEEEEEeCCCCcEEEEeeCCCC--CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-EE
Confidence 468888876443 4899999998888765321111 1012333 367787766531111123444443 11111 11
Q ss_pred Ec-c-CCceeEEEEEeeCCcEEEEeeC-------CeEEEEECCCCcEEEe
Q 037345 293 VG-P-ILGVLRALEFWKNGSFFIESNT-------NQLLLYDPNTRALRDV 333 (357)
Q Consensus 293 i~-~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~yd~~t~~~~~v 333 (357)
+. . ......-+.+..+|.+++.... ..++.+|+++++++.+
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 21 1 1112233455566778776542 5788999988777665
No 59
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=77.72 E-value=27 Score=28.45 Aligned_cols=195 Identities=11% Similarity=0.122 Sum_probs=94.6
Q ss_pred EEecccceEEE-eecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCc
Q 037345 99 LLGNCNGLFCL-HDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSV 177 (357)
Q Consensus 99 ~~~s~~GLll~-~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~ 177 (357)
+..+.+|-+.+ ......++.++|+.++....++..... . ..++.+|+.. .. + +... .+
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~------p~~i~~~~~g-~l--~-v~~~-~~------- 87 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY---Q------PQGLAVDGAG-TV--Y-VTDF-NN------- 87 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCC---S------CCCEEECTTC-CE--E-EEET-TT-------
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcC---C------cceeEECCCC-CE--E-EEcC-CC-------
Confidence 44445677666 544445788999988776655432211 1 3456677643 22 2 2211 21
Q ss_pred ceEEEEEEcCCCceeecccCCcccccccCCCCCcceE--ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCC
Q 037345 178 STEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTY--LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPN 255 (357)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~ 255 (357)
. +.+|+..++.-..+.... ... -.++. -+|.+|+.... ...|..+|..+......... .....
T Consensus 88 ~--i~~~d~~~~~~~~~~~~~---~~~-----p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~~~~-~~~~p- 152 (270)
T 1rwi_B 88 R--VVTLAAGSNNQTVLPFDG---LNY-----PEGLAVDTQGAVYVADRG---NNRVVKLAAGSKTQTVLPFT-GLNDP- 152 (270)
T ss_dssp E--EEEECTTCSCCEECCCCS---CSS-----EEEEEECTTCCEEEEEGG---GTEEEEECTTCCSCEECCCC-SCCSC-
T ss_pred E--EEEEeCCCceEeeeecCC---cCC-----CcceEECCCCCEEEEECC---CCEEEEEECCCceeEeeccc-cCCCc-
Confidence 3 337777665443332110 110 11222 26787776543 24788888776654433211 11111
Q ss_pred CeEEEE-CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 256 PILGVY-DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 256 ~~l~~~-~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
..+... +|+|++.... ...+.+|-.+... ......... ....-+.+..+|.+++... ++.+..||++++....+
T Consensus 153 ~~i~~~~~g~l~v~~~~--~~~i~~~~~~~~~-~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~ 228 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTD--NNRVVKLEAESNN-QVVLPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL 228 (270)
T ss_dssp CCEEECTTCCEEEEEGG--GTEEEEECTTTCC-EEECCCSSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEEC
T ss_pred eeEEEeCCCCEEEEECC--CCEEEEEecCCCc-eEeecccCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceee
Confidence 234433 6888776652 4456555544321 111111111 1123344445677777654 56899999988776554
No 60
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=77.65 E-value=35 Score=29.64 Aligned_cols=185 Identities=12% Similarity=0.111 Sum_probs=94.7
Q ss_pred eEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEE
Q 037345 106 LFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHT 185 (357)
Q Consensus 106 Lll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 185 (357)
.+++.......+.|+|..|++....-.... . ...+.+.+..+ +-++. .... .. +++++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~----~------~~~~~~s~dg~-~l~~~--~~~d-------~~--i~v~d 60 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS----N------PMGAVISPDGT-KVYVA--NAHS-------ND--VSIID 60 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS----S------EEEEEECTTSS-EEEEE--EGGG-------TE--EEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC----C------cceEEECCCCC-EEEEE--CCCC-------Ce--EEEEE
Confidence 445555444578999999887654322111 1 34556655432 22121 1112 14 44898
Q ss_pred cCCCceeecccCCcccccccCCCCCcce--EECce-EEEEEccCCCcCEEEEEECCCcceeE-ecCCCCCCCCCCeEEE-
Q 037345 186 LSTDSWRYLKANELSDYSFLGGQQSENT--YLDRI-CYWIAWRYNNCQEILSFHMRDEAFHV-IKCPDNSYFPNPILGV- 260 (357)
Q Consensus 186 s~t~~W~~~~~~~~~~~~~~~~~~~~~v--~~~G~-lyw~~~~~~~~~~i~~fD~~~e~~~~-i~lP~~~~~~~~~l~~- 260 (357)
..+++-...-.... . -.++ .-+|. ++..... ...|..+|+.+.+... +...... ..+..
T Consensus 61 ~~~~~~~~~~~~~~---~------v~~~~~spdg~~l~~~~~~---~~~v~v~d~~~~~~~~~~~~~~~~----~~~~~s 124 (391)
T 1l0q_A 61 TATNNVIATVPAGS---S------PQGVAVSPDGKQVYVTNMA---SSTLSVIDTTSNTVAGTVKTGKSP----LGLALS 124 (391)
T ss_dssp TTTTEEEEEEECSS---S------EEEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEECSSSE----EEEEEC
T ss_pred CCCCeEEEEEECCC---C------ccceEECCCCCEEEEEECC---CCEEEEEECCCCeEEEEEeCCCCc----ceEEEC
Confidence 88775432111000 0 1122 22454 4433322 2589999999876543 3322111 12222
Q ss_pred ECCe-EEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEE-EEe-eCCeEEEEECCCCcEEEe
Q 037345 261 YDNS-LHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFF-IES-NTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 261 ~~g~-L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~-~~~-~~~~~~~yd~~t~~~~~v 333 (357)
.+|+ |++... ....+.+|-++........... .. ...+.+..++..+ +.. .++.+..||+++++....
T Consensus 125 ~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~--~~-~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 125 PDGKKLYVTNN--GDKTVSVINTVTKAVINTVSVG--RS-PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT 195 (391)
T ss_dssp TTSSEEEEEET--TTTEEEEEETTTTEEEEEEECC--SS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEeC--CCCEEEEEECCCCcEEEEEecC--CC-cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 2566 444443 4678999987765443333222 12 2445556666654 433 367899999999877554
No 61
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=77.49 E-value=24 Score=31.64 Aligned_cols=109 Identities=7% Similarity=0.137 Sum_probs=61.5
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEE-EECCe-EEEEEecCCCCeEEEEEEcC-CeeE--E
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNS-LHFLDFDRSESCFEKWVMKE-GSWT--K 289 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~-L~l~~~~~~~~~~~iW~l~~-~~W~--~ 289 (357)
-+|.+||.... ...|..+|+++.....+...... .. ++ ..+|+ |++.... .. ..||.++. ..|. .
T Consensus 140 ~~g~lyv~d~~---~~~I~~id~~~g~~~~~~~~~~~--~~--ia~~~~g~~l~~~d~~--~~-~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 140 GNNTVLAYQRD---DPRVRLISVDDNKVTTVHPGFKG--GK--PAVTKDKQRVYSIGWE--GT-HTVYVYMKASGWAPTR 209 (409)
T ss_dssp STTEEEEEETT---TTEEEEEETTTTEEEEEEETCCB--CB--CEECTTSSEEEEEBSS--TT-CEEEEEEGGGTTCEEE
T ss_pred CCCCEEEEecC---CCcEEEEECCCCEEEEeeccCCC--Cc--eeEecCCCcEEEEecC--CC-ceEEEEEcCCCceeEE
Confidence 47899998764 35899999998877765332111 11 22 23444 4443332 22 15677665 4443 2
Q ss_pred EEEEcc-CCceeEEEEEee-CCcEEEEeeCCeEEEEECCCCcEEEe
Q 037345 290 QLSVGP-ILGVLRALEFWK-NGSFFIESNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 290 ~~~i~~-~~~~~~~~~~~~-~~~i~~~~~~~~~~~yd~~t~~~~~v 333 (357)
...+.. ......-+++.. ++.+|+...++.++.||+++++...+
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 212211 111223345555 57777755567799999998876665
No 62
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=76.59 E-value=37 Score=29.44 Aligned_cols=195 Identities=10% Similarity=0.008 Sum_probs=96.7
Q ss_pred EEecccce-EEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCc
Q 037345 99 LLGNCNGL-FCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSV 177 (357)
Q Consensus 99 ~~~s~~GL-ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~ 177 (357)
+.-+.+|- +++.......+.++|+.|++....-.... . ...+.+++..+ +-++. .... .
T Consensus 37 ~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~----~------v~~~~~spdg~-~l~~~--~~~~-------~ 96 (391)
T 1l0q_A 37 AVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS----S------PQGVAVSPDGK-QVYVT--NMAS-------S 96 (391)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS----S------EEEEEECTTSS-EEEEE--ETTT-------T
T ss_pred EEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC----C------ccceEECCCCC-EEEEE--ECCC-------C
Confidence 33444553 43444334478999999887654322211 1 45666666433 22222 1111 2
Q ss_pred ceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECce-EEEEEccCCCcCEEEEEECCCcceeE-ecCCCCCCCCC
Q 037345 178 STEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRI-CYWIAWRYNNCQEILSFHMRDEAFHV-IKCPDNSYFPN 255 (357)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~i~~fD~~~e~~~~-i~lP~~~~~~~ 255 (357)
.+. +|+..++.-...-.... ... .-.+.-+|. +|..... ...|..+|+.+.+... +......
T Consensus 97 ~v~--v~d~~~~~~~~~~~~~~--~~~-----~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~~~~~~~~~~~---- 160 (391)
T 1l0q_A 97 TLS--VIDTTSNTVAGTVKTGK--SPL-----GLALSPDGKKLYVTNNG---DKTVSVINTVTKAVINTVSVGRSP---- 160 (391)
T ss_dssp EEE--EEETTTTEEEEEEECSS--SEE-----EEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEECCSSE----
T ss_pred EEE--EEECCCCeEEEEEeCCC--Ccc-----eEEECCCCCEEEEEeCC---CCEEEEEECCCCcEEEEEecCCCc----
Confidence 444 99988875432211100 000 111223454 4444332 3589999998876643 2221111
Q ss_pred CeEE-EECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEE-e---eCCeEEEEECCCCcE
Q 037345 256 PILG-VYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIE-S---NTNQLLLYDPNTRAL 330 (357)
Q Consensus 256 ~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~-~---~~~~~~~yd~~t~~~ 330 (357)
..+. ..+|+..++... ....+.+|-++...- ...+... ....-+.+..+|..++. . .++.+..||+++++.
T Consensus 161 ~~~~~~~dg~~l~~~~~-~~~~v~~~d~~~~~~--~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVANF-DSMSISVIDTVTNSV--IDTVKVE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp EEEEECTTSSEEEEEET-TTTEEEEEETTTTEE--EEEEECS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred ceEEECCCCCEEEEEeC-CCCEEEEEECCCCeE--EEEEecC-CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE
Confidence 1222 224653333332 467888998776432 2233222 22233455556665444 3 367899999998876
Q ss_pred EEe
Q 037345 331 RDV 333 (357)
Q Consensus 331 ~~v 333 (357)
...
T Consensus 237 ~~~ 239 (391)
T 1l0q_A 237 TAR 239 (391)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 63
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=76.20 E-value=34 Score=28.80 Aligned_cols=110 Identities=9% Similarity=0.077 Sum_probs=58.0
Q ss_pred Cce-EEEEEccCCCcCEEEEEECC--CcceeEec-CCCCCCCCCCeEEE-ECCeEEEEEecCCCCeEEEEEEcC-CeeEE
Q 037345 216 DRI-CYWIAWRYNNCQEILSFHMR--DEAFHVIK-CPDNSYFPNPILGV-YDNSLHFLDFDRSESCFEKWVMKE-GSWTK 289 (357)
Q Consensus 216 ~G~-lyw~~~~~~~~~~i~~fD~~--~e~~~~i~-lP~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~ 289 (357)
+|. +|...... ..|..||+. ++++..+. ++... .-..+.. .+|+..++... ....+.+|-+++ .....
T Consensus 48 dg~~l~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~-~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 48 DKRYLYVGVRPE---FRVLAYRIAPDDGALTFAAESALPG--SLTHISTDHQGQFVFVGSY-NAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp TSSEEEEEETTT---TEEEEEEECTTTCCEEEEEEEECSS--CCSEEEECTTSSEEEEEET-TTTEEEEEEEETTEEEEE
T ss_pred CCCEEEEeecCC---CeEEEEEecCCCCceeeccccccCC--CCcEEEEcCCCCEEEEEec-CCCeEEEEECCCCccccc
Confidence 554 55555431 477777776 66665432 22111 1122333 35663333332 467899998854 23333
Q ss_pred EEEEccCCceeEEEEEeeCCcE-EEEe-eCCeEEEEECCC-CcEEE
Q 037345 290 QLSVGPILGVLRALEFWKNGSF-FIES-NTNQLLLYDPNT-RALRD 332 (357)
Q Consensus 290 ~~~i~~~~~~~~~~~~~~~~~i-~~~~-~~~~~~~yd~~t-~~~~~ 332 (357)
...+..... ...+.+..+|+. ++.. .++.+..||+++ ++++.
T Consensus 122 ~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 122 VDVVEGLDG-CHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp EEEECCCTT-BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred cccccCCCC-ceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 344432222 233445566664 4444 477899999988 76653
No 64
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=75.35 E-value=25 Score=34.22 Aligned_cols=113 Identities=13% Similarity=0.103 Sum_probs=63.4
Q ss_pred CcceEECceEEEEEccCCCcCEEEEEECCCc--ceeEecCCCCC--------CCCCCeEEEECCeEEEEEecCCCCeEEE
Q 037345 210 SENTYLDRICYWIAWRYNNCQEILSFHMRDE--AFHVIKCPDNS--------YFPNPILGVYDNSLHFLDFDRSESCFEK 279 (357)
Q Consensus 210 ~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e--~~~~i~lP~~~--------~~~~~~l~~~~g~L~l~~~~~~~~~~~i 279 (357)
..++..+|.+|...... .|.++|..+. .|+. ..+... ......++..+|++++.+. ...+..
T Consensus 64 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~---dg~l~A 135 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFS----VVYALDARDGRLIWKY-DPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL---DGRLEA 135 (689)
T ss_dssp CCCEEETTEEEEECGGG----CEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSEEEE
T ss_pred ecCEEECCEEEEEcCCC----eEEEEECCCCceeEEE-cCCCCccccccccccCCCCccEEECCEEEEEcc---CCEEEE
Confidence 66788999999987654 7999998754 5553 222110 1111234566777776543 234433
Q ss_pred EEEcC--CeeEEEEEEccCC--ce-eEEEEEeeCCcEEEEee------CCeEEEEECCCCcEEE
Q 037345 280 WVMKE--GSWTKQLSVGPIL--GV-LRALEFWKNGSFFIESN------TNQLLLYDPNTRALRD 332 (357)
Q Consensus 280 W~l~~--~~W~~~~~i~~~~--~~-~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~ 332 (357)
+-.+. ..|......+... .+ ..|+. .++.+|+-.. ++.++.||.+|++...
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 136 IDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp EETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 33333 4576543212110 11 23332 2566666432 4689999999998753
No 65
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=75.16 E-value=43 Score=29.51 Aligned_cols=111 Identities=7% Similarity=-0.036 Sum_probs=62.6
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCC--CCCCCeEEE--ECCeEEEEEecCCCCeEEEEEEcCCeeEEEE
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNS--YFPNPILGV--YDNSLHFLDFDRSESCFEKWVMKEGSWTKQL 291 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~--~~~~~~l~~--~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~ 291 (357)
+|.++.....+ ..|..+|+.+.+......+... +......+. .+|++.+.+. ....+.+|-++...-..
T Consensus 133 ~~~~~~~~~~~---~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~--~d~~v~~~d~~~~~~~~-- 205 (433)
T 3bws_A 133 NTRLAIPLLED---EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM--QANAVHVFDLKTLAYKA-- 205 (433)
T ss_dssp SSEEEEEBTTS---SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG--GGTEEEEEETTTCCEEE--
T ss_pred CCeEEEEeCCC---CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC--CCCEEEEEECCCceEEE--
Confidence 56666555432 4689999998776543222111 111112222 2677766665 46789999887733222
Q ss_pred EEccCCceeEEEEEeeCCcEEE-Ee-eCCeEEEEECCCCcEEEe
Q 037345 292 SVGPILGVLRALEFWKNGSFFI-ES-NTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 292 ~i~~~~~~~~~~~~~~~~~i~~-~~-~~~~~~~yd~~t~~~~~v 333 (357)
.+........-+.+..++..++ .. .++.+..||+++++....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 206 TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE
Confidence 2222222234455666666554 44 367899999998877544
No 66
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=74.80 E-value=18 Score=35.03 Aligned_cols=113 Identities=12% Similarity=0.103 Sum_probs=63.1
Q ss_pred CcceEECceEEEEEccCCCcCEEEEEECCCc--ceeEecCCCCC--------CCCCCeEEEECCeEEEEEecCCCCeEEE
Q 037345 210 SENTYLDRICYWIAWRYNNCQEILSFHMRDE--AFHVIKCPDNS--------YFPNPILGVYDNSLHFLDFDRSESCFEK 279 (357)
Q Consensus 210 ~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e--~~~~i~lP~~~--------~~~~~~l~~~~g~L~l~~~~~~~~~~~i 279 (357)
..++..+|.+|.....+ .|.++|..+. .|+. +.+... ......++..+|+|++... ...+..
T Consensus 71 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~---dg~l~a 142 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS----VVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW---DGRLIA 142 (677)
T ss_dssp CCCEEETTEEEEECGGG----CEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT---TSEEEE
T ss_pred eCCEEECCEEEEECCCC----eEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEcC---CCEEEE
Confidence 56788999999887654 8999998765 4543 222110 0111234556777776543 234333
Q ss_pred EEEcC--CeeEEEEEEccC--Cce-eEEEEEeeCCcEEEEee------CCeEEEEECCCCcEEE
Q 037345 280 WVMKE--GSWTKQLSVGPI--LGV-LRALEFWKNGSFFIESN------TNQLLLYDPNTRALRD 332 (357)
Q Consensus 280 W~l~~--~~W~~~~~i~~~--~~~-~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~ 332 (357)
+-.+. ..|......+.. ..+ ..|+. .++.+|+... ++.++.||.+|++...
T Consensus 143 lD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 143 LDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp EETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 33333 456653210100 111 22332 3466666543 4789999999998764
No 67
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=74.02 E-value=42 Score=28.83 Aligned_cols=98 Identities=7% Similarity=0.093 Sum_probs=54.2
Q ss_pred CEEEEEECCCcceeEe-cCCCCCCCCCCe-EEE-ECCeEEEEEecCCCCeEEEEEEcC-CeeEEEEEEccCCceeEEEEE
Q 037345 230 QEILSFHMRDEAFHVI-KCPDNSYFPNPI-LGV-YDNSLHFLDFDRSESCFEKWVMKE-GSWTKQLSVGPILGVLRALEF 305 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i-~lP~~~~~~~~~-l~~-~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~ 305 (357)
..+..+|..++.+..+ .+.... .... +.. -+|++.+.+. .+..+.||-++. ..+.....+........-+.+
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h~--~~v~~v~~sp~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGHE--NEVKSVAWAPSGNLLATCS--RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCCS--SCEEEEEECTTSSEEEEEE--TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred CcEEEEEccCCCeEEEEEccCCC--CCceEEEEeCCCCEEEEEE--CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 3566677777665433 222221 1112 222 2566555554 467899999987 555555555432223344555
Q ss_pred eeCCcEEEE-eeCCeEEEEECCCCcEE
Q 037345 306 WKNGSFFIE-SNTNQLLLYDPNTRALR 331 (357)
Q Consensus 306 ~~~~~i~~~-~~~~~~~~yd~~t~~~~ 331 (357)
..++.+++. ..++.+..||.+++++.
T Consensus 159 ~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 159 HPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp CSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred CCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 556665554 34677888888777654
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=73.72 E-value=44 Score=28.92 Aligned_cols=184 Identities=10% Similarity=0.092 Sum_probs=91.7
Q ss_pred CeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCceeec
Q 037345 115 NRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDSWRYL 194 (357)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 194 (357)
..+.|||..+++....-.... .. . ....+.+.+..+.+-+.+ ..+ ..+. +++..++..+.+
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~-h~-~-----~v~~~~~~~~~~~~l~s~---~~d-------~~i~--iwd~~~~~~~~~ 156 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMG-PG-D-----AITGMKFNQFNTNQLFVS---SIR-------GATT--LRDFSGSVIQVF 156 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCS-TT-C-----BEEEEEEETTEEEEEEEE---ETT-------TEEE--EEETTSCEEEEE
T ss_pred CeEEEEeCCCcccceeeecCC-cC-C-----ceeEEEeCCCCCCEEEEE---eCC-------CEEE--EEECCCCceEEE
Confidence 367899998877654433211 11 1 145566665333332222 111 2444 888887665544
Q ss_pred ccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEE-EECCe-EEEEEecC
Q 037345 195 KANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNS-LHFLDFDR 272 (357)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~-L~l~~~~~ 272 (357)
.......... . .-...-+|........ ...|..+|+..+....+...... -..+. .-+|+ +.+.+.
T Consensus 157 ~~~~~~~~~v-~---~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~h~~~---v~~~~~~~~~~~~l~s~~-- 224 (383)
T 3ei3_B 157 AKTDSWDYWY-C---CVDVSVSRQMLATGDS---TGRLLLLGLDGHEIFKEKLHKAK---VTHAEFNPRCDWLMATSS-- 224 (383)
T ss_dssp ECCCCSSCCE-E---EEEEETTTTEEEEEET---TSEEEEEETTSCEEEEEECSSSC---EEEEEECSSCTTEEEEEE--
T ss_pred eccCCCCCCe-E---EEEECCCCCEEEEECC---CCCEEEEECCCCEEEEeccCCCc---EEEEEECCCCCCEEEEEe--
Confidence 3221100000 0 0111223443333322 25888899876655544432111 01122 22455 555554
Q ss_pred CCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEee-CCcEEEE-eeCCeEEEEECCCCcE
Q 037345 273 SESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWK-NGSFFIE-SNTNQLLLYDPNTRAL 330 (357)
Q Consensus 273 ~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~-~~~i~~~-~~~~~~~~yd~~t~~~ 330 (357)
.+..+.||-+.. ..-.....+... ....-+.+.. ++..++. ..++.+..||+++++.
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 225 VDATVKLWDLRNIKDKNSYIAEMPHE-KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp TTSEEEEEEGGGCCSTTCEEEEEECS-SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred CCCEEEEEeCCCCCcccceEEEecCC-CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 467999999986 112233333322 2234455556 6776665 4478999999987654
No 69
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=73.71 E-value=36 Score=27.94 Aligned_cols=197 Identities=12% Similarity=0.084 Sum_probs=97.7
Q ss_pred EecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcce
Q 037345 100 LGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVST 179 (357)
Q Consensus 100 ~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 179 (357)
++..+|.|.+.+....++.++++.++....+-.... .. ..++.+|+..+...+. ... ....
T Consensus 43 ~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~---~~------p~~ia~d~~~~~lyv~---d~~-------~~~I 103 (267)
T 1npe_A 43 FDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL---GS------PEGIALDHLGRTIFWT---DSQ-------LDRI 103 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC---CC------EEEEEEETTTTEEEEE---ETT-------TTEE
T ss_pred EecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC---CC------ccEEEEEecCCeEEEE---ECC-------CCEE
Confidence 344567777777655678888887765433321111 11 4577788765432221 111 1243
Q ss_pred EEEEEEcCCCceeecccCCcccccccCCCCCcceEE---CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCC
Q 037345 180 EVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL---DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNP 256 (357)
Q Consensus 180 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~ 256 (357)
. +++..+..-+.+... .+. . -.++.+ +|.+||..... ....|..++++......+... ... .-.
T Consensus 104 ~--~~~~~g~~~~~~~~~---~~~----~-P~~i~vd~~~g~lyv~~~~~-~~~~I~~~~~dg~~~~~~~~~-~~~-~P~ 170 (267)
T 1npe_A 104 E--VAKMDGTQRRVLFDT---GLV----N-PRGIVTDPVRGNLYWTDWNR-DNPKIETSHMDGTNRRILAQD-NLG-LPN 170 (267)
T ss_dssp E--EEETTSCSCEEEECS---SCS----S-EEEEEEETTTTEEEEEECCS-SSCEEEEEETTSCCCEEEECT-TCS-CEE
T ss_pred E--EEEcCCCCEEEEEEC---CCC----C-ccEEEEeeCCCEEEEEECCC-CCcEEEEEecCCCCcEEEEEC-CCC-CCc
Confidence 3 777764332222110 110 0 123333 68999987541 135788899887655443211 111 111
Q ss_pred eEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEee-CCcEEEEee-CCeEEEEECCCCcE-E
Q 037345 257 ILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWK-NGSFFIESN-TNQLLLYDPNTRAL-R 331 (357)
Q Consensus 257 ~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~yd~~t~~~-~ 331 (357)
.++.. ++.|+++... ..++ ++++-..=.....+. ....|.++.. ++.+|+... .+++..+|+++++. +
T Consensus 171 gia~d~~~~~lyv~d~~--~~~I--~~~~~~g~~~~~~~~---~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 171 GLTFDAFSSQLCWVDAG--THRA--ECLNPAQPGRRKVLE---GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMD 243 (267)
T ss_dssp EEEEETTTTEEEEEETT--TTEE--EEEETTEEEEEEEEE---CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEcCCCCEEEEEECC--CCEE--EEEecCCCceEEEec---CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceE
Confidence 23332 4568877653 3444 444431111111122 1233445443 455666553 57899999998775 4
Q ss_pred Eeee
Q 037345 332 DVGL 335 (357)
Q Consensus 332 ~v~~ 335 (357)
.+..
T Consensus 244 ~i~~ 247 (267)
T 1npe_A 244 TFHP 247 (267)
T ss_dssp EECC
T ss_pred EEcc
Confidence 4443
No 70
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=73.44 E-value=41 Score=28.46 Aligned_cols=207 Identities=9% Similarity=0.024 Sum_probs=102.9
Q ss_pred cccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEE
Q 037345 102 NCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEV 181 (357)
Q Consensus 102 s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 181 (357)
+.+|-+++.......++++||.+++...+..... .. ..++.+|+.. .. +.. ..... ..... +
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~------~~~i~~~~dg-~l--~v~-~~~~~---~~~~~--i 114 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK---AN------PAAIKIHKDG-RL--FVC-YLGDF---KSTGG--I 114 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS---SS------EEEEEECTTS-CE--EEE-ECTTS---SSCCE--E
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC---CC------cceEEECCCC-cE--EEE-eCCCC---CCCce--E
Confidence 4567766655444578999999988766532111 11 4567777653 22 211 11110 00113 3
Q ss_pred EEEEcCCCceeec-ccCCcccccccCCCCCcceEECceEEEEEccC---CCcCEEEEEECCCcceeEecCCCCCCCCCCe
Q 037345 182 ILHTLSTDSWRYL-KANELSDYSFLGGQQSENTYLDRICYWIAWRY---NNCQEILSFHMRDEAFHVIKCPDNSYFPNPI 257 (357)
Q Consensus 182 ~vyss~t~~W~~~-~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~---~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~ 257 (357)
.+|+..++.-+.+ ........+. .-.+.-+|.+|...... .....|..+|.++.++..+.-. .... ..
T Consensus 115 ~~~d~~~~~~~~~~~~~~~~~~~~-----~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~-~~ 186 (333)
T 2dg1_A 115 FAATENGDNLQDIIEDLSTAYCID-----DMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVA-NG 186 (333)
T ss_dssp EEECTTSCSCEEEECSSSSCCCEE-----EEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSE-EE
T ss_pred EEEeCCCCEEEEEEccCccCCccc-----ceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcc-cc
Confidence 4788777665422 2111100000 11122367776654321 0134789999887766544210 0000 12
Q ss_pred EEE-ECCe-EEEEEecCCCCeEEEEEEcC--CeeEEE---EEEccC-CceeEEEEEeeCCcEEEEee-CCeEEEEECCCC
Q 037345 258 LGV-YDNS-LHFLDFDRSESCFEKWVMKE--GSWTKQ---LSVGPI-LGVLRALEFWKNGSFFIESN-TNQLLLYDPNTR 328 (357)
Q Consensus 258 l~~-~~g~-L~l~~~~~~~~~~~iW~l~~--~~W~~~---~~i~~~-~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~ 328 (357)
+.. .+|+ |++... ....+.+|-++. ...... ...... .....-+.+..+|.+++... ++.+..||++++
T Consensus 187 i~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 187 IALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp EEECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSC
T ss_pred eEECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCC
Confidence 222 3565 666543 345777777753 222111 111111 11233455556788887764 578999999877
Q ss_pred cEEEeeec
Q 037345 329 ALRDVGLG 336 (357)
Q Consensus 329 ~~~~v~~~ 336 (357)
.++.+..+
T Consensus 265 ~~~~~~~~ 272 (333)
T 2dg1_A 265 PIGQILIP 272 (333)
T ss_dssp EEEEEECT
T ss_pred EEEEEEcC
Confidence 77777544
No 71
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=73.24 E-value=45 Score=28.84 Aligned_cols=98 Identities=17% Similarity=0.112 Sum_probs=51.7
Q ss_pred CEEEEEECCCcceeE-ecCCCCCCCCCC-eEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEE
Q 037345 230 QEILSFHMRDEAFHV-IKCPDNSYFPNP-ILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEF 305 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~-i~lP~~~~~~~~-~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 305 (357)
..|..+|+.+.+-.. +..+.. .... .+... ++++.+.+. ....+.||-++.. ....++.....-..-+.+
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~l~sg~--~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~f 265 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCSAP--GYLPTSLAWHPQQSEVFVFGD--ENGTVSLVDTKST--SCVLSSAVHSQCVTGLVF 265 (344)
T ss_dssp SCEEEEETTSSSCEEECC------CCCEEEEEECSSCTTEEEEEE--TTSEEEEEESCC----CCEEEECCSSCEEEEEE
T ss_pred cccccccccccceeeeeeccee--eccceeeeecCCCCcceEEec--cCCcEEEEECCCC--cEEEEEcCCCCCEEEEEE
Confidence 467888988765432 322221 1111 12222 345555444 4678999987762 122233222222344555
Q ss_pred eeCCc-EEEE-eeCCeEEEEECCCCcEEEe
Q 037345 306 WKNGS-FFIE-SNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 306 ~~~~~-i~~~-~~~~~~~~yd~~t~~~~~v 333 (357)
..++. ++.. ..|+.+..||.+++++.++
T Consensus 266 sp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 266 SPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred ccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 55554 4443 4578899999999987665
No 72
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=72.33 E-value=38 Score=27.55 Aligned_cols=200 Identities=11% Similarity=0.010 Sum_probs=94.0
Q ss_pred EecccceEEEeecCCCeEEEEeccc-cchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcc
Q 037345 100 LGNCNGLFCLHDKNSNRISIWNLAT-REFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVS 178 (357)
Q Consensus 100 ~~s~~GLll~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~ 178 (357)
.-+-+|-.++...+ ..++++|..+ ++...+....... . ...+.+.+.. .+-++. ..... ..
T Consensus 48 ~~spdg~~l~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~--~------~~~~~~spdg-~~l~~~-~~~~~-------~~ 109 (297)
T 2ojh_A 48 NWSPDGKYLLLNSE-GLLYRLSLAGDPSPEKVDTGFATI--C------NNDHGISPDG-ALYAIS-DKVEF-------GK 109 (297)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCCSCEECCCTTCCC--B------CSCCEECTTS-SEEEEE-ECTTT-------SS
T ss_pred EECCCCCEEEEEcC-CeEEEEeCCCCCCceEeccccccc--c------ccceEECCCC-CEEEEE-EeCCC-------Cc
Confidence 33445554444433 3789999999 8777665433111 0 2234444432 322222 11111 12
Q ss_pred eEEEEEEcCCCceeecccCCcccccccCCCCCcceEECce-EEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCe
Q 037345 179 TEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRI-CYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPI 257 (357)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~ 257 (357)
..+.+++..++.-+.+..... .. .....-+|. +++....+ ....|..+|+.+.....+...... . ..
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~~-~~-------~~~~spdg~~l~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~--~-~~ 177 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRLMTKNLP-SY-------WHGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGVETRLTHGEGR--N-DG 177 (297)
T ss_dssp CEEEEEETTCCCCEECCSSSS-EE-------EEEECTTSSEEEEEEEET-TEEEEEEEETTTCCEEECCCSSSC--E-EE
T ss_pred ceEEEEECCCCceEEeecCCC-cc-------ceEECCCCCEEEEEECCC-CceEEEEEECCCCcceEcccCCCc--c-cc
Confidence 333366666665444432211 00 011112443 33333222 234677777777666543321111 0 12
Q ss_pred EE-EECCeEEEEEecCCCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEE-EEeeC-----------CeEEE
Q 037345 258 LG-VYDNSLHFLDFDRSESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFF-IESNT-----------NQLLL 322 (357)
Q Consensus 258 l~-~~~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~-~~~~~-----------~~~~~ 322 (357)
+. .-+|+..++... ....+.||.++. ... ..+.........+.+..+|+.+ +...+ ..++.
T Consensus 178 ~~~s~dg~~l~~~~~-~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 178 PDYSPDGRWIYFNSS-RTGQMQIWRVRVDGSSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp EEECTTSSEEEEEEC-TTSSCEEEEEETTSSCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred ceECCCCCEEEEEec-CCCCccEEEECCCCCCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence 22 235664443332 356788999974 221 2232222223344555667654 44332 46999
Q ss_pred EECCCCcEEEe
Q 037345 323 YDPNTRALRDV 333 (357)
Q Consensus 323 yd~~t~~~~~v 333 (357)
||+++++.+.+
T Consensus 254 ~d~~~~~~~~~ 264 (297)
T 2ojh_A 254 MDMDGGNVETL 264 (297)
T ss_dssp EETTSCSCEEE
T ss_pred EecCCCCceee
Confidence 99999887766
No 73
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=72.06 E-value=53 Score=29.08 Aligned_cols=108 Identities=9% Similarity=0.079 Sum_probs=53.7
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcC-CeeEEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKE-GSWTKQL 291 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~ 291 (357)
.+|.|||..... ..|..+|++...-..+-. ...... ..+++. +|.|+.+... . .-.|+..+- ++-.+.
T Consensus 169 ~~g~lY~~d~~~---~~I~~~~~dg~~~~~l~~-~~l~~P-~giavdp~~g~ly~td~~--~-~~~I~r~~~dG~~~~~- 239 (386)
T 3v65_B 169 VHDKLYWTDSGT---SRIEVANLDGAHRKVLLW-QSLEKP-RAIALHPMEGTIYWTDWG--N-TPRIEASSMDGSGRRI- 239 (386)
T ss_dssp TTTEEEEEETTT---TEEEECBTTSCSCEEEEC-SSCSCE-EEEEEETTTTEEEEEECS--S-SCEEEEEETTSCSCEE-
T ss_pred CCCeEEEEcCCC---CeEEEEeCCCCceEEeec-CCCCCC-cEEEEEcCCCeEEEeccC--C-CCEEEEEeCCCCCcEE-
Confidence 368999988653 588999988765443321 111111 234443 5778776642 2 223444443 221111
Q ss_pred EEccCCceeEE--EEEe-eCCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 292 SVGPILGVLRA--LEFW-KNGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 292 ~i~~~~~~~~~--~~~~-~~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
.+. ..+..| +++. .++.||+... ...|..+|++....+.+
T Consensus 240 ~~~--~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 240 IAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp EEC--SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEE
T ss_pred EEE--CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEE
Confidence 111 112233 3343 2455666543 45677777776554444
No 74
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=71.13 E-value=85 Score=31.08 Aligned_cols=156 Identities=9% Similarity=0.049 Sum_probs=79.2
Q ss_pred eeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCceeecccCCcccccccCCCCCcceEE---CceEEEEE
Q 037345 147 NFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL---DRICYWIA 223 (357)
Q Consensus 147 ~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~ 223 (357)
..|+++|...+.- +.. ... ....+ +++..+..-+.+... .+.. -.++.+ +|.|||..
T Consensus 473 P~GLAvD~~~~~L--Y~t-D~~-------~~~I~--v~~ldG~~~~~l~~~---~l~~-----P~gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 473 PDGLAVDWIHSNI--YWT-DSV-------LGTVS--VADTKGVKRKTLFRE---NGSK-----PRAIVVDPVHGFMYWTD 532 (791)
T ss_dssp CCEEEEETTTTEE--EEE-ETT-------TTEEE--EEETTSSSEEEEEEC---TTCC-----EEEEEEETTTTEEEEEE
T ss_pred cceeeeeecCCcE--EEE-ecC-------CCeEE--EEeCCCCeEEEEEeC---CCCC-----cceEEEecCCCCEEEec
Confidence 4578888765432 221 111 12444 787776554443221 1110 234444 58999998
Q ss_pred ccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeE
Q 037345 224 WRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLR 301 (357)
Q Consensus 224 ~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~ 301 (357)
... ...|..++++...-..+-. .... .-..|++- +|+|+++.. ....|+.--++. +-.+.. +.....+..
T Consensus 533 ~g~--~~~I~~~~~dG~~~~~lv~-~~l~-~P~GLavD~~~~~LYwaD~--~~~~I~~~d~dG-~~~~~v-~~~~~~l~~ 604 (791)
T 3m0c_C 533 WGT--PAKIKKGGLNGVDIYSLVT-ENIQ-WPNGITLDLLSGRLYWVDS--KLHSISSIDVNG-GNRKTI-LEDEKRLAH 604 (791)
T ss_dssp CSS--SCEEEEEETTSCCEEEEEC-SSCS-CEEEEEEETTTTEEEEEET--TTTEEEEEETTS-CSCEEE-EECTTTTSS
T ss_pred CCC--CCeEEEEecCCCceEEEEe-CCCC-CceEEEEecCCCeEEEEeC--CCCcEEEEecCC-CceEEE-ecCCCccCC
Confidence 543 3589999998766544321 1111 11234433 688988865 344444333333 211111 111122345
Q ss_pred EEEEee-CCcEEEEee-CCeEEEEECCCCcE
Q 037345 302 ALEFWK-NGSFFIESN-TNQLLLYDPNTRAL 330 (357)
Q Consensus 302 ~~~~~~-~~~i~~~~~-~~~~~~yd~~t~~~ 330 (357)
|+++.. ++.||+... ...|...|..+++-
T Consensus 605 P~glav~~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 605 PFSLAVFEDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEEETTTCCC
T ss_pred CCEEEEeCCEEEEEECCCCEEEEEeCCCCcc
Confidence 666653 345666654 46788899776644
No 75
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=70.92 E-value=54 Score=31.90 Aligned_cols=110 Identities=11% Similarity=0.132 Sum_probs=55.8
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEE
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSV 293 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i 293 (357)
+|.|||..... ...|..++++...-..+-.. ..... ..|+.- +|+|+++.. ....|.+.-++... .+ ..+
T Consensus 507 ~g~ly~td~~~--~~~I~~~~~dG~~~~~l~~~-~l~~P-nGlavd~~~~~LY~aD~--~~~~I~~~d~dG~~-~~-~~~ 578 (699)
T 1n7d_A 507 HGFMYWTDWGT--PAKIKKGGLNGVDIYSLVTE-NIQWP-NGITLDLLSGRLYWVDS--KLHSISSIDVNGGN-RK-TIL 578 (699)
T ss_dssp SSCCEECCCSS--SCCEEBCCSSSCCCCEESCS-SCSSC-CCEEECTTTCCEEEEET--TTTEEEEECSSSSC-CE-EEC
T ss_pred CCcEEEcccCC--CCeEEEEeCCCCCeeEEEeC-CCCCc-cEEEEeccCCEEEEEec--CCCeEEEEccCCCc-eE-EEE
Confidence 68999976432 24788888876544433211 11111 124443 577888775 34444443333211 11 111
Q ss_pred ccCCceeEEEEEee-CCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 294 GPILGVLRALEFWK-NGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 294 ~~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
.....+..|.++.- .+.+|+... .+.|..+|..+++..++
T Consensus 579 ~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 579 EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNL 620 (699)
T ss_dssp CCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEEC
T ss_pred ecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEE
Confidence 11112334444442 345666543 56899999987776554
No 76
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=70.30 E-value=59 Score=28.93 Aligned_cols=196 Identities=12% Similarity=0.121 Sum_probs=98.0
Q ss_pred CeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCceeec
Q 037345 115 NRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDSWRYL 194 (357)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 194 (357)
..++++|..|++...+...+. . ...+.+.|.. ++-++.. ...+ ...+++++..++..+.+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~----~------~~~~~~spdg-~~la~~~--~~~g-------~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR----H------NGAPAFSPDG-SKLAFAL--SKTG-------SLNLYVMDLASGQIRQV 262 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS----C------EEEEEECTTS-SEEEEEE--CTTS-------SCEEEEEETTTCCEEEC
T ss_pred cEEEEEECCCCcEEEeecCCC----c------ccCEEEcCCC-CEEEEEE--ecCC-------CceEEEEECCCCCEEeC
Confidence 478999999988776543321 1 3455665543 3322221 1111 22344888888776555
Q ss_pred ccCCcccccccCCCCCcceEECce-EEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEE-EECCe-EEEEEec
Q 037345 195 KANELSDYSFLGGQQSENTYLDRI-CYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNS-LHFLDFD 271 (357)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~-L~l~~~~ 271 (357)
..... ... .....-+|. +++....+ +...|..+|+.+.+...+..... ....+. .-+|+ |+.....
T Consensus 263 ~~~~~-~~~------~~~~spdg~~l~~~s~~~-g~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 263 TDGRS-NNT------EPTWFPDSQNLAFTSDQA-GRPQVYKVNINGGAPQRITWEGS---QNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp CCCSS-CEE------EEEECTTSSEEEEEECTT-SSCEEEEEETTSSCCEECCCSSS---EEEEEEECTTSSEEEEEEEC
T ss_pred cCCCC-ccc------ceEECCCCCEEEEEECCC-CCcEEEEEECCCCCEEEEecCCC---cccCeEECCCCCEEEEEECc
Confidence 43211 000 111112554 44444322 34578889998877554332211 101222 23666 4433332
Q ss_pred CCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEE-EeeCC---eEEEEECCCCcEEEeeecCCcEEEEEe
Q 037345 272 RSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFI-ESNTN---QLLLYDPNTRALRDVGLGTDGLFLHRY 345 (357)
Q Consensus 272 ~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~-~~~~~---~~~~yd~~t~~~~~v~~~~~~~~~~~y 345 (357)
.....+.+|-++..... .+.... ......+..+|..++ ...+. .++.+|++++..+.+.-..+......+
T Consensus 332 ~g~~~i~~~d~~~~~~~---~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~ 405 (415)
T 2hqs_A 332 GGQQHIAKQDLATGGVQ---VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAW 405 (415)
T ss_dssp SSCEEEEEEETTTCCEE---ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEE
T ss_pred CCceEEEEEECCCCCEE---EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCcc
Confidence 22345666666553332 222212 234445566777544 44333 799999999998888443233333333
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=69.86 E-value=57 Score=28.59 Aligned_cols=181 Identities=10% Similarity=0.091 Sum_probs=91.8
Q ss_pred CeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCceeec
Q 037345 115 NRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDSWRYL 194 (357)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 194 (357)
..+.|||..|++...+-..... . ....+.+.+. +.+-+++ ...+ . +++|+..++.-...
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~--~------~v~~v~~s~~-~~~l~~~---~~dg-------~--i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDES--T------YVASVKWSHD-GSFLSVG---LGNG-------L--VDIYDVESQTKLRT 171 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTT--C------CEEEEEECTT-SSEEEEE---ETTS-------C--EEEEETTTCCEEEE
T ss_pred CeEEEeeCCCCcEeEeeecCCC--C------CEEEEEECCC-CCEEEEE---CCCC-------e--EEEEECcCCeEEEE
Confidence 3689999999887655433211 1 1456677663 3443322 1122 4 44998887643221
Q ss_pred ccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCe-EEEE-CCeEEEEEecC
Q 037345 195 KANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPI-LGVY-DNSLHFLDFDR 272 (357)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~-l~~~-~g~L~l~~~~~ 272 (357)
-... -. ...++..+|.+...... ...|..+|+....-....+... ..... +... +|.+.+++.
T Consensus 172 ~~~~---~~-----~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~-- 236 (401)
T 4aez_A 172 MAGH---QA-----RVGCLSWNRHVLSSGSR---SGAIHHHDVRIANHQIGTLQGH--SSEVCGLAWRSDGLQLASGG-- 236 (401)
T ss_dssp ECCC---SS-----CEEEEEEETTEEEEEET---TSEEEEEETTSSSCEEEEEECC--SSCEEEEEECTTSSEEEEEE--
T ss_pred ecCC---CC-----ceEEEEECCCEEEEEcC---CCCEEEEecccCcceeeEEcCC--CCCeeEEEEcCCCCEEEEEe--
Confidence 1100 00 02344446654444433 2588889988433222222111 11112 2222 566555554
Q ss_pred CCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCC-cEEEEee---CCeEEEEECCCCcEEEe
Q 037345 273 SESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNG-SFFIESN---TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 273 ~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~i~~~~~---~~~~~~yd~~t~~~~~v 333 (357)
.+..+.||-++.. .....+........-+.+..++ .++.... ++.+..||+++++....
T Consensus 237 ~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~ 299 (401)
T 4aez_A 237 NDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNT 299 (401)
T ss_dssp TTSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEE
T ss_pred CCCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEE
Confidence 4678999988862 1222333222223445555544 4555543 78899999988776443
No 78
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=69.81 E-value=50 Score=27.93 Aligned_cols=202 Identities=7% Similarity=0.003 Sum_probs=99.6
Q ss_pred cceEEEeecCCCeEEEEeccccchhc-CCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEE
Q 037345 104 NGLFCLHDKNSNRISIWNLATREFRA-LPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVI 182 (357)
Q Consensus 104 ~GLll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 182 (357)
++.+.+.......+.++|+.|++... ++.......... ......++.+++..+. ++. ..... .....
T Consensus 100 g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~--l~~-~~~~~------~~~i~-- 167 (353)
T 3vgz_A 100 TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEV-RPLQPRELVADDATNT--VYI-SGIGK------ESVIW-- 167 (353)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSC-CCCEEEEEEEETTTTE--EEE-EEESS------SCEEE--
T ss_pred CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcccccc-CCCCCceEEECCCCCE--EEE-EecCC------CceEE--
Confidence 34466665555588999999988533 333221110000 0011345777765442 111 11111 12334
Q ss_pred EEEcCCCceee-cccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCccee-EecCCCCCCCCC-CeEE
Q 037345 183 LHTLSTDSWRY-LKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAFH-VIKCPDNSYFPN-PILG 259 (357)
Q Consensus 183 vyss~t~~W~~-~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~-~i~lP~~~~~~~-~~l~ 259 (357)
+++..++.=.. ++... ..+. .-.+.-+|...+.... ...|..+|+.+.+.. .++.+....... ..+.
T Consensus 168 ~~d~~~~~~~~~~~~~~--~~~~-----~~~~s~dg~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTG--KMST-----GLALDSEGKRLYTTNA---DGELITIDTADNKILSRKKLLDDGKEHFFINIS 237 (353)
T ss_dssp EEETTTTEEEEEECCCC--TTCC-----CCEEETTTTEEEEECT---TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEE
T ss_pred EEcCCCCceEEEecCCC--Cccc-----eEEECCCCCEEEEEcC---CCeEEEEECCCCeEEEEEEcCCCCCCcccceEE
Confidence 88887664221 11000 0010 1223335543333332 248889999987664 345533211111 1233
Q ss_pred E-ECCe-EEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCc-EEEEe-eCCeEEEEECCCCcEEEe
Q 037345 260 V-YDNS-LHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGS-FFIES-NTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 260 ~-~~g~-L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-i~~~~-~~~~~~~yd~~t~~~~~v 333 (357)
. -+|+ |++... ....+.+|-++..+-......+. . ..+.+..+|+ +++.. .++.+..||+++++....
T Consensus 238 ~s~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~--~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 238 LDTARQRAFITDS--KAAEVLVVDTRNGNILAKVAAPE--S--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp EETTTTEEEEEES--SSSEEEEEETTTCCEEEEEECSS--C--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEeC--CCCEEEEEECCCCcEEEEEEcCC--C--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEE
Confidence 3 3565 555443 45778888776643333333322 1 2355566776 55544 367899999999887544
No 79
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=68.83 E-value=57 Score=28.16 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=19.2
Q ss_pred EEEEEeeCCcEEEEe-eCCeEEEEECCCCcEEE
Q 037345 301 RALEFWKNGSFFIES-NTNQLLLYDPNTRALRD 332 (357)
Q Consensus 301 ~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~ 332 (357)
.-+.+..++..++.. .++.+..||+++.+...
T Consensus 338 ~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 338 DCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred EEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 345555667766654 47889999999876543
No 80
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=68.68 E-value=56 Score=28.02 Aligned_cols=62 Identities=10% Similarity=0.145 Sum_probs=40.5
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEe-eCCeEEEEEC
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIES-NTNQLLLYDP 325 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~ 325 (357)
+|.+.+.+. .+..+.||-++...|.....+........-+.+..+|..++.. .|+.+..||.
T Consensus 161 ~~~~l~s~s--~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASAS--YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSSCEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEe--CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 466544444 4678999999888888777775433334455666667665553 4677888875
No 81
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=67.70 E-value=68 Score=28.62 Aligned_cols=201 Identities=12% Similarity=0.067 Sum_probs=101.5
Q ss_pred eEEecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCc
Q 037345 98 ELLGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSV 177 (357)
Q Consensus 98 ~~~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~ 177 (357)
.+.-..+|-|.+.+....++.++|+.+++...+..... . .. +.+++..+ .++... ... ..
T Consensus 135 ~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~----~------~~-ia~~~~g~--~l~~~d-~~~------~~ 194 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK----G------GK-PAVTKDKQ--RVYSIG-WEG------TH 194 (409)
T ss_dssp EEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC----B------CB-CEECTTSS--EEEEEB-SST------TC
T ss_pred EEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC----C------Cc-eeEecCCC--cEEEEe-cCC------Cc
Confidence 34444678877777665688999999988776644311 1 12 55555433 122211 111 01
Q ss_pred ceEEEEEEcCCCc-eeecccCCcccccccCCCCCcceEE-CceEEEEEccCCCcCEEEEEECCCcceeEec-CCCC-CCC
Q 037345 178 STEVILHTLSTDS-WRYLKANELSDYSFLGGQQSENTYL-DRICYWIAWRYNNCQEILSFHMRDEAFHVIK-CPDN-SYF 253 (357)
Q Consensus 178 ~~~~~vyss~t~~-W~~~~~~~~~~~~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~-lP~~-~~~ 253 (357)
. +.+++..++. .+.+............ .-.+.- +|.+|+... ...|..+|+++.....+. .+.. ...
T Consensus 195 ~--I~~~d~~~~~~~~~~g~~~~~~~~~p~---~iav~p~~g~lyv~d~----~~~I~~~d~~~~~~~~~~~~~~~g~~~ 265 (409)
T 3hrp_A 195 T--VYVYMKASGWAPTRIGQLGSTFSGKIG---AVALDETEEWLYFVDS----NKNFGRFNVKTQEVTLIKQLELSGSLG 265 (409)
T ss_dssp E--EEEEEGGGTTCEEEEEECCTTSCSCCC---BCEECTTSSEEEEECT----TCEEEEEETTTCCEEEEEECCCCSCCC
T ss_pred e--EEEEEcCCCceeEEeeeccchhcCCcE---EEEEeCCCCeEEEEEC----CCcEEEEECCCCCEEEEecccccCCCC
Confidence 2 3366655432 2233110000010000 112222 789999332 248999999987766552 1111 111
Q ss_pred CC-C-eEEEE--CCeEEEEEecCCCCeEEEEEEcC-CeeEEEEEEccC------------CceeEEEE--EeeCCcEEEE
Q 037345 254 PN-P-ILGVY--DNSLHFLDFDRSESCFEKWVMKE-GSWTKQLSVGPI------------LGVLRALE--FWKNGSFFIE 314 (357)
Q Consensus 254 ~~-~-~l~~~--~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~------------~~~~~~~~--~~~~~~i~~~ 314 (357)
.. . .++.. +|.|+++.. ...+ |+.++. ..-.. ..+.. ..+..|.+ +..+|.+|+.
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~--~~~~--I~~~~~~g~~~~--~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQ--NLSS--VYKITPDGECEW--FCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEET--TTTE--EEEECTTCCEEE--EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred CCccccEEEeCCCCEEEEEeC--CCCE--EEEEecCCCEEE--EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 22 2 45554 477887664 3444 444443 22111 11111 01223444 4456788887
Q ss_pred ee--CCeEEEEECCCCcEEEe
Q 037345 315 SN--TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 315 ~~--~~~~~~yd~~t~~~~~v 333 (357)
.. ..++..+|+.++++..+
T Consensus 340 d~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp ETTTTCEEEEEETTTTEEEEE
T ss_pred eCCCCCEEEEEECCCCEEEEE
Confidence 64 46899999888888776
No 82
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=67.59 E-value=54 Score=27.44 Aligned_cols=206 Identities=11% Similarity=0.093 Sum_probs=105.6
Q ss_pred ecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceE
Q 037345 101 GNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTE 180 (357)
Q Consensus 101 ~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (357)
+..+|-|++.+....+++.+||.|++...+..+. . ..++..++..+ + +++. . ..
T Consensus 21 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----~------~~~i~~~~dG~-l-~v~~----~-------~~-- 74 (297)
T 3g4e_A 21 EEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-----P------VSSVALRQSGG-Y-VATI----G-------TK-- 74 (297)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEECSS-----C------EEEEEEBTTSS-E-EEEE----T-------TE--
T ss_pred ECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC-----c------eEEEEECCCCC-E-EEEE----C-------Ce--
Confidence 3345666666655557899999998765443221 1 44667776544 2 2221 1 14
Q ss_pred EEEEEcCCCceeecccCCcccccccCCCCCcce--EECceEEEEEccC--------CCcCEEEEEECCCcceeEe---cC
Q 037345 181 VILHTLSTDSWRYLKANELSDYSFLGGQQSENT--YLDRICYWIAWRY--------NNCQEILSFHMRDEAFHVI---KC 247 (357)
Q Consensus 181 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v--~~~G~lyw~~~~~--------~~~~~i~~fD~~~e~~~~i---~l 247 (357)
+.+|+..++..+.+..... ..+... .+.+ .-+|.+|+-.... .....|..+|.....-... ..
T Consensus 75 l~~~d~~~g~~~~~~~~~~-~~~~~~---~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~ 150 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDN-DKKNNR---FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDI 150 (297)
T ss_dssp EEEEETTTTEEEEEEECCT-TCSSEE---EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESB
T ss_pred EEEEECCCCcEEEEEecCC-CCCCCC---CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecccc
Confidence 3489988888876543221 111100 1222 2368866644221 1234788888764322211 11
Q ss_pred CCCCCCCCCeEEE-ECCe-EEEEEecCCCCeEEEEEEc-C-CeeEEEEE---EccCCceeEEEEEeeCCcEEEEee-CCe
Q 037345 248 PDNSYFPNPILGV-YDNS-LHFLDFDRSESCFEKWVMK-E-GSWTKQLS---VGPILGVLRALEFWKNGSFFIESN-TNQ 319 (357)
Q Consensus 248 P~~~~~~~~~l~~-~~g~-L~l~~~~~~~~~~~iW~l~-~-~~W~~~~~---i~~~~~~~~~~~~~~~~~i~~~~~-~~~ 319 (357)
|. .++. -+|+ |+++.. ....+.+|-++ + ........ +........-+.+..+|.+++... ++.
T Consensus 151 pn-------gi~~spdg~~lyv~~~--~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~ 221 (297)
T 3g4e_A 151 SN-------GLDWSLDHKIFYYIDS--LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR 221 (297)
T ss_dssp EE-------EEEECTTSCEEEEEEG--GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE
T ss_pred cc-------ceEEcCCCCEEEEecC--CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE
Confidence 11 1222 2565 665554 34566666664 2 43322221 221112233445556788888765 567
Q ss_pred EEEEECCCCcE-EEeeecCCcEEEEEe
Q 037345 320 LLLYDPNTRAL-RDVGLGTDGLFLHRY 345 (357)
Q Consensus 320 ~~~yd~~t~~~-~~v~~~~~~~~~~~y 345 (357)
+..||++|+++ ..+.++......+.|
T Consensus 222 v~~~d~~tG~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp EEEECTTTCCEEEEEECSSSBEEEEEE
T ss_pred EEEEcCCCceEEEEEECCCCCceEEEE
Confidence 99999996664 566665334444444
No 83
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=67.35 E-value=57 Score=27.60 Aligned_cols=61 Identities=7% Similarity=0.096 Sum_probs=34.8
Q ss_pred CCCeEEEEEEcC-CeeEEEEEEccCCc------------eeEEEEEeeCCcEEEE-eeCCeEEEEECCCCcEEEe
Q 037345 273 SESCFEKWVMKE-GSWTKQLSVGPILG------------VLRALEFWKNGSFFIE-SNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 273 ~~~~~~iW~l~~-~~W~~~~~i~~~~~------------~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~~v 333 (357)
....+.||-++. ..-.....+..... -..-+.+..++..++. ..++.+..||+++++....
T Consensus 236 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~ 310 (368)
T 3mmy_A 236 IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310 (368)
T ss_dssp TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEE
Confidence 468999999987 21011112211100 1333455556665555 4578899999998766443
No 84
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=66.68 E-value=60 Score=27.64 Aligned_cols=203 Identities=10% Similarity=0.011 Sum_probs=93.9
Q ss_pred ecccceEEEeecCCCeEEEEecccc--chhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcc
Q 037345 101 GNCNGLFCLHDKNSNRISIWNLATR--EFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVS 178 (357)
Q Consensus 101 ~s~~GLll~~~~~~~~~~V~NP~T~--~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~ 178 (357)
-+.+|-+.+.+....++.++|+.++ ....+......... ........++.+|+..+...|.- ... ...
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~-~~~~~~P~~ia~~~~~g~lyv~d---~~~------~~~ 167 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSD-QNHFCQPTDVAVEPSTGAVFVSD---GYC------NSR 167 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCS-TTCCSSEEEEEECTTTCCEEEEE---CSS------CCE
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCC-ccccCCCcEEEEeCCCCeEEEEe---CCC------CCe
Confidence 3356766666655557888888665 23333221110000 00011256788888555433322 101 124
Q ss_pred eEEEEEEcCCCceeecccCCc------ccccccCCCCCcceEE--C-ceEEEEEccCCCcCEEEEEECCCcce-eEecCC
Q 037345 179 TEVILHTLSTDSWRYLKANEL------SDYSFLGGQQSENTYL--D-RICYWIAWRYNNCQEILSFHMRDEAF-HVIKCP 248 (357)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~------~~~~~~~~~~~~~v~~--~-G~lyw~~~~~~~~~~i~~fD~~~e~~-~~i~lP 248 (357)
+++|+.....-+.+..... ..+.. -.++.+ + |.+|+..... ..|..||+++.++ ..+..+
T Consensus 168 --I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~-----p~gia~d~~~g~l~v~d~~~---~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 168 --IVQFSPSGKFVTQWGEESSGSSPRPGQFSV-----PHSLALVPHLDQLCVADREN---GRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp --EEEECTTSCEEEEECEECCSSSCCTTEESC-----EEEEEEETTTTEEEEEETTT---TEEEEEETTTCCEEEEECCT
T ss_pred --EEEEcCCCCEEEEeccCCCCCCCCCcccCC-----CcEEEEECCCCEEEEEECCC---CEEEEEECCCCcEEEEEecc
Confidence 3377744332222221100 01111 234444 4 8888876543 6899999985544 555554
Q ss_pred CCCCCCC------CeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccC-CceeEE--EEEeeCCcEEEEee-CC
Q 037345 249 DNSYFPN------PILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPI-LGVLRA--LEFWKNGSFFIESN-TN 318 (357)
Q Consensus 249 ~~~~~~~------~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~-~~~~~~--~~~~~~~~i~~~~~-~~ 318 (357)
....... ..+...+|.+++... ....+.+|-+++.+.. ..+... .....| +++..+|.+|+... ++
T Consensus 238 ~~~~~~~~~~~~pg~~~~~~g~~~v~~~--~~~~v~~~~~~~g~~~--~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 238 SFGRNVFAISYIPGFLFAVNGKPYFGDQ--EPVQGFVMNFSSGEII--DVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp TTTTCEEEEEEETTEEEEEECCCCTTCS--CCCCEEEEETTTCCEE--EEECCSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred ccCCCcceeeecCCEEEEeCCCEEeccC--CCcEEEEEEcCCCeEE--EEEcCCCCccCCeeEEEECCCCCEEEEECCCC
Confidence 3321100 122222333332221 3446777766654322 233321 122233 44445666666543 45
Q ss_pred eEEEEECCC
Q 037345 319 QLLLYDPNT 327 (357)
Q Consensus 319 ~~~~yd~~t 327 (357)
++..|+++.
T Consensus 314 ~I~~~~~~~ 322 (329)
T 3fvz_A 314 TVWKFTLTE 322 (329)
T ss_dssp CEEEEEEEE
T ss_pred EEEEEeCCc
Confidence 677776654
No 85
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=66.62 E-value=71 Score=28.48 Aligned_cols=112 Identities=6% Similarity=-0.026 Sum_probs=68.3
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEec---C-------CCCC-CCCCCeEEEE--CCeEEEEEecC-----CCCe
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVIK---C-------PDNS-YFPNPILGVY--DNSLHFLDFDR-----SESC 276 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~---l-------P~~~-~~~~~~l~~~--~g~L~l~~~~~-----~~~~ 276 (357)
.+|.++|....+ .+.++|+.++.-..+. + +.-. .+.. .++.. +++|+++.... ....
T Consensus 236 ~dG~~~~vs~~g----~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q-~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 236 KAGRLVWPTYTG----KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ-QVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TTTEEEEEBTTS----EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS-CEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCCcEEEEeCCC----EEEEEECCCCcceeecceeccccccccccccCCCcc-eeeECCCCCeEEEEeccccccccCCCC
Confidence 488899987755 8999999887644321 1 1100 1121 23332 35577765421 2345
Q ss_pred EEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCc-EEEEe-e-CCeEEEEECCCCcEEE
Q 037345 277 FEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGS-FFIES-N-TNQLLLYDPNTRALRD 332 (357)
Q Consensus 277 ~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-i~~~~-~-~~~~~~yd~~t~~~~~ 332 (357)
=+||+++-.++..+.+|.... -..-+.+..+++ .++.. . ++.+.+||.+|++..+
T Consensus 311 ~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 789999986677777775431 122456666765 54443 3 6789999999988744
No 86
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=66.51 E-value=58 Score=27.45 Aligned_cols=55 Identities=13% Similarity=0.325 Sum_probs=34.6
Q ss_pred CCCeEEEEEEcC-CeeEEEEEEccCCceeEEEEEeeCC----cEEEE-eeCCeEEEEECCC
Q 037345 273 SESCFEKWVMKE-GSWTKQLSVGPILGVLRALEFWKNG----SFFIE-SNTNQLLLYDPNT 327 (357)
Q Consensus 273 ~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~----~i~~~-~~~~~~~~yd~~t 327 (357)
.+..+.||-++. ..|.....+........-+.+..++ ..+.. ..|+.+..||+++
T Consensus 187 ~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 187 CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 467899999986 6777666554322223444444443 44443 4478899999876
No 87
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=65.71 E-value=61 Score=27.39 Aligned_cols=69 Identities=10% Similarity=0.099 Sum_probs=43.4
Q ss_pred CeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEE-eeCCeEEEEECCCCcEEEe
Q 037345 263 NSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIE-SNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 263 g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~~v 333 (357)
|++.+++. .+..+.||-++.........+.....-..-+.+..++..++. ..++.+..||+++++...+
T Consensus 54 g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGS--WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEE--TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEEEC--CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee
Confidence 46555544 467899999987223332333322223344555566766555 4478899999999988776
No 88
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=65.18 E-value=59 Score=30.78 Aligned_cols=115 Identities=16% Similarity=0.188 Sum_probs=61.9
Q ss_pred CcceEECceEEEEEccCCCcCEEEEEECCCc--ceeEe-cCCCCCC----CCCCeEEEECCeEEEEEecCCCCeEEEEEE
Q 037345 210 SENTYLDRICYWIAWRYNNCQEILSFHMRDE--AFHVI-KCPDNSY----FPNPILGVYDNSLHFLDFDRSESCFEKWVM 282 (357)
Q Consensus 210 ~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e--~~~~i-~lP~~~~----~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l 282 (357)
..++..+|.+|...... .+.++|..+. .|+.- ..|.... .....++..+|++++.+.+ .. |..+
T Consensus 62 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d---g~--l~Al 132 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS----RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD---AS--VVAL 132 (582)
T ss_dssp CCCEEETTEEEEEETTT----EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT---TE--EEEE
T ss_pred eccEEECCEEEEEcCCC----CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC---CE--EEEE
Confidence 56788999999987644 5999998654 56542 2222110 0112345567777765532 22 3444
Q ss_pred cC----CeeEEEEEEcc-CCce-eEEEEEee--CC--cEEEEee------CCeEEEEECCCCcEEEe
Q 037345 283 KE----GSWTKQLSVGP-ILGV-LRALEFWK--NG--SFFIESN------TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 283 ~~----~~W~~~~~i~~-~~~~-~~~~~~~~--~~--~i~~~~~------~~~~~~yd~~t~~~~~v 333 (357)
+- ..|.....-.. ...+ ..|+...+ +| .||+-.. ++.++.||.+|++....
T Consensus 133 D~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 133 NKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp ESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred ECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 42 45665321100 0011 23443322 12 3443221 57899999999987654
No 89
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=64.75 E-value=70 Score=27.76 Aligned_cols=65 Identities=11% Similarity=0.020 Sum_probs=39.4
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCC-cEEEE-eeCCeEEEEECCCCcE
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNG-SFFIE-SNTNQLLLYDPNTRAL 330 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~i~~~-~~~~~~~~yd~~t~~~ 330 (357)
+|.+.+.+. .+..+.||-++.. .....+........-+.+..++ .+++. ..++.+..||+++.+.
T Consensus 274 ~~~~l~s~~--~dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 274 DEHLLLSSG--RDNTVLLWNPESA--EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp CSSCEEEEE--SSSEEEEECSSSC--CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred CCCeEEEEe--CCCCEEEeeCCCC--ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 566555554 4678999988763 2333343222223345555666 56555 4478899999987764
No 90
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=64.67 E-value=63 Score=27.19 Aligned_cols=105 Identities=10% Similarity=0.090 Sum_probs=59.0
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEE-ECCeEEEEEecCCCCeEEEEEEcC--CeeEEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGV-YDNSLHFLDFDRSESCFEKWVMKE--GSWTKQL 291 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~ 291 (357)
-+|.+||..... ..|..+|.+++.-..+..+... ..++. .+|+|+++... .....|+.++. .+.....
T Consensus 41 ~~g~lyv~d~~~---~~I~~~d~~g~~~~~~~~~~~p----~gia~~~dG~l~vad~~--~~~~~v~~~d~~~g~~~~~~ 111 (306)
T 2p4o_A 41 PDGTIFVTNHEV---GEIVSITPDGNQQIHATVEGKV----SGLAFTSNGDLVATGWN--ADSIPVVSLVKSDGTVETLL 111 (306)
T ss_dssp TTSCEEEEETTT---TEEEEECTTCCEEEEEECSSEE----EEEEECTTSCEEEEEEC--TTSCEEEEEECTTSCEEEEE
T ss_pred CCCCEEEEeCCC---CeEEEECCCCceEEEEeCCCCc----eeEEEcCCCcEEEEecc--CCcceEEEEcCCCCeEEEEE
Confidence 378899987442 5899999988654545554321 12333 36888776653 22345566543 4444444
Q ss_pred EEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCCc
Q 037345 292 SVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTRA 329 (357)
Q Consensus 292 ~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~ 329 (357)
.+... ....-...+.++.+|+... .+.++.+|+.+++
T Consensus 112 ~~~~~-~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 112 TLPDA-IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp ECTTC-SCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred eCCCc-cccCcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence 33211 1222233344555666553 6789999998753
No 91
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=64.59 E-value=61 Score=27.00 Aligned_cols=110 Identities=10% Similarity=0.019 Sum_probs=56.8
Q ss_pred ceEECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCC----CCCCeEEEECCeEEEEEecCCCCeEEEEEEcC-Ce
Q 037345 212 NTYLDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSY----FPNPILGVYDNSLHFLDFDRSESCFEKWVMKE-GS 286 (357)
Q Consensus 212 ~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~----~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~ 286 (357)
.+..+|.++...... ...+++||.+.+....+.+..... .........+|.+.++.. ....+.+|-.+. ..
T Consensus 83 ~~~~dG~~lv~~~~~--~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~--~~~~v~~~d~~G~~~ 158 (276)
T 3no2_A 83 RILPDGNALVAWCGH--PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF--ATSEVREIAPNGQLL 158 (276)
T ss_dssp EECTTSCEEEEEEST--TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET--TTTEEEEECTTSCEE
T ss_pred EECCCCCEEEEecCC--CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec--CCCEEEEECCCCCEE
Confidence 345577766654331 247888998776555555432210 111111233566555443 344555555443 33
Q ss_pred eEEEEEEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCCcE
Q 037345 287 WTKQLSVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTRAL 330 (357)
Q Consensus 287 W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~ 330 (357)
|... ... .... .....+|.+++... +.+++.+|++|+++
T Consensus 159 w~~~--~~~--~~~~-~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 159 NSVK--LSG--TPFS-SAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp EEEE--CSS--CCCE-EEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred EEEE--CCC--Cccc-eeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 4332 221 1111 22335677777655 45799999996665
No 92
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=64.10 E-value=74 Score=27.77 Aligned_cols=203 Identities=9% Similarity=-0.015 Sum_probs=99.1
Q ss_pred cceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEE
Q 037345 104 NGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVIL 183 (357)
Q Consensus 104 ~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 183 (357)
+|-+++.......+.|||..+++...-...+......+ ......+.+.+....+-+.+ ..+ ..+. +
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~~l~s~---~~d-------g~i~--i 158 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH--TKRVGIVAWHPTAQNVLLSA---GCD-------NVIL--V 158 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC--SSCEEEEEECSSBTTEEEEE---ETT-------SCEE--E
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC--CCeEEEEEECcCCCCEEEEE---cCC-------CEEE--E
Confidence 56555555444578999998875432111111000000 01145566666543332222 112 2444 9
Q ss_pred EEcCCCceeecc--cCCcccccccCCCCCcceEE--CceEEEEEccCCCcCEEEEEECCCcceeE-ecCCCCCCCCCCeE
Q 037345 184 HTLSTDSWRYLK--ANELSDYSFLGGQQSENTYL--DRICYWIAWRYNNCQEILSFHMRDEAFHV-IKCPDNSYFPNPIL 258 (357)
Q Consensus 184 yss~t~~W~~~~--~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~i~~fD~~~e~~~~-i~lP~~~~~~~~~l 258 (357)
++.+++.....- .... -. ..++.+ +|........ ...|..+|+.+.+... +..... ...-..+
T Consensus 159 wd~~~~~~~~~~~~~~~~--~~------v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~ 226 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHP--DT------IYSVDWSRDGALICTSCR---DKRVRVIEPRKGTVVAEKDRPHE-GTRPVHA 226 (402)
T ss_dssp EETTTTEEEEEECTTTCC--SC------EEEEEECTTSSCEEEEET---TSEEEEEETTTTEEEEEEECSSC-SSSCCEE
T ss_pred EECCCCCccEEEecCCCC--Cc------eEEEEECCCCCEEEEEec---CCcEEEEeCCCCceeeeeccCCC-CCcceEE
Confidence 998877543211 1000 00 112222 4543333332 2488899998766533 212211 1111223
Q ss_pred E-EECCeEEEEEec-CCCCeEEEEEEcC-CeeEEEEEEccCCceeEEEEEeeCCcEEEE-e-eCCeEEEEECCCCc--EE
Q 037345 259 G-VYDNSLHFLDFD-RSESCFEKWVMKE-GSWTKQLSVGPILGVLRALEFWKNGSFFIE-S-NTNQLLLYDPNTRA--LR 331 (357)
Q Consensus 259 ~-~~~g~L~l~~~~-~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~-~-~~~~~~~yd~~t~~--~~ 331 (357)
. ..+|++.+++.. .....+.||-++. ..=.....++....+ .-+.+..++..+++ . .++.+..||+++++ ++
T Consensus 227 ~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~ 305 (402)
T 2aq5_A 227 VFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV-LLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLH 305 (402)
T ss_dssp EECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC-EEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEE
T ss_pred EEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce-eEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceE
Confidence 3 336776555531 2568999999887 321223333332222 33455566776654 4 37889999999988 55
Q ss_pred Ee
Q 037345 332 DV 333 (357)
Q Consensus 332 ~v 333 (357)
.+
T Consensus 306 ~l 307 (402)
T 2aq5_A 306 YL 307 (402)
T ss_dssp EE
T ss_pred ee
Confidence 55
No 93
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=63.81 E-value=77 Score=27.87 Aligned_cols=113 Identities=11% Similarity=0.039 Sum_probs=62.8
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEe---cCCCC------CCCCCCe-EE-EEC-CeEEEEEecCC-----CCeEE
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVI---KCPDN------SYFPNPI-LG-VYD-NSLHFLDFDRS-----ESCFE 278 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i---~lP~~------~~~~~~~-l~-~~~-g~L~l~~~~~~-----~~~~~ 278 (357)
+|.+||....+ .+.++|+.+.....+ ++... ....... +. .-+ ++|++...... ...=+
T Consensus 224 ~~~~~~~~~~~----~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~ 299 (373)
T 2mad_H 224 SGRIVWPVYSG----KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKE 299 (373)
T ss_pred CCEEEEEcCCc----eEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCe
Confidence 45666666433 788888876543322 21110 0001111 12 223 44666553211 12236
Q ss_pred EEEEcCCeeEEEEEEccCCceeEEEEEeeCCc-EEEEee--CCeEEEEECCCCcEEEe
Q 037345 279 KWVMKEGSWTKQLSVGPILGVLRALEFWKNGS-FFIESN--TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 279 iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-i~~~~~--~~~~~~yd~~t~~~~~v 333 (357)
||+.+-.+...+.+|... .....+.+..+|+ +++..+ ++.+..+|.+|++..+.
T Consensus 300 V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 300 VTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 888887667777777532 2244556667777 555543 68899999999888654
No 94
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=63.70 E-value=62 Score=26.76 Aligned_cols=60 Identities=12% Similarity=0.253 Sum_probs=40.0
Q ss_pred CCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEe-eCCeEEEEECCCCcEEEe
Q 037345 274 ESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIES-NTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 274 ~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~v 333 (357)
+.++.||-++.++-.+............-+.+..++..++.. .++.+..||+++++....
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 578999988775545544443222234455666677776654 478899999999887544
No 95
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=63.37 E-value=79 Score=27.87 Aligned_cols=89 Identities=10% Similarity=0.170 Sum_probs=56.1
Q ss_pred eeEecCCCCCCCCCCeEEEE-CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEe-eCCe
Q 037345 242 FHVIKCPDNSYFPNPILGVY-DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIES-NTNQ 319 (357)
Q Consensus 242 ~~~i~lP~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~~~~ 319 (357)
++.++.|...+.+-..++.. .+.+..++. +.++.||-.+.++-.+............-+.+..+|..++.. .++.
T Consensus 94 ~~~l~ap~~~~d~y~~~l~wS~~n~lAvgl---d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~ 170 (420)
T 4gga_A 94 DRILDAPEIRNDYYLNLVDWSSGNVLAVAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE 170 (420)
T ss_dssp SEEEECTTCCCCTTCBCEEECTTSEEEEEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred ceEEECCCCcccccceeEEECCCCEEEEEe---CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCe
Confidence 34557777764444566654 333333343 579999988876555555554322334556666778776654 4788
Q ss_pred EEEEECCCCcEEEe
Q 037345 320 LLLYDPNTRALRDV 333 (357)
Q Consensus 320 ~~~yd~~t~~~~~v 333 (357)
+..||+++++....
T Consensus 171 v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 171 VQLWDVQQQKRLRN 184 (420)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEEcCCCcEEEE
Confidence 99999999876544
No 96
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=63.14 E-value=74 Score=27.46 Aligned_cols=195 Identities=10% Similarity=0.034 Sum_probs=84.1
Q ss_pred cccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEE
Q 037345 102 NCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEV 181 (357)
Q Consensus 102 s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 181 (357)
+.+|.++....+ ..+.|||..+++.............. ....+.+.+.. .+-+.+ ... ..+.
T Consensus 103 s~d~~~l~~s~d-g~v~lWd~~~~~~~~~~~~~~~~h~~-----~V~~v~~spdg-~~l~sg---s~d-------g~v~- 164 (357)
T 4g56_B 103 VSEKGILVASDS-GAVELWEILEKESLLVNKFAKYEHDD-----IVKTLSVFSDG-TQAVSG---GKD-------FSVK- 164 (357)
T ss_dssp ETTTEEEEEETT-SCEEEC--------CCCCEEECCCSS-----CEEEEEECSSS-SEEEEE---ETT-------SCEE-
T ss_pred cCCCCEEEEECC-CEEEEeeccccceeEEEeeccCCCCC-----CEEEEEECCCC-CEEEEE---eCC-------CeEE-
Confidence 445655554444 36789999998765544322211111 14556665532 332221 222 2434
Q ss_pred EEEEcCCCceee-cccCCcccccccCCCCCcceEE--Cce-EEEEEccCCCcCEEEEEECCCcceeE-ecCCCCCCCCCC
Q 037345 182 ILHTLSTDSWRY-LKANELSDYSFLGGQQSENTYL--DRI-CYWIAWRYNNCQEILSFHMRDEAFHV-IKCPDNSYFPNP 256 (357)
Q Consensus 182 ~vyss~t~~W~~-~~~~~~~~~~~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~i~~fD~~~e~~~~-i~lP~~~~~~~~ 256 (357)
+++..++.-.. +..... . ..++.+ +|. +...... ...|..+|+.+.+-.. +.... .....
T Consensus 165 -iwd~~~~~~~~~~~~h~~-~--------v~~v~~s~~~~~~~~s~~~---dg~v~~wd~~~~~~~~~~~~~~--~~~~v 229 (357)
T 4g56_B 165 -VWDLSQKAVLKSYNAHSS-E--------VNCVAACPGKDTIFLSCGE---DGRILLWDTRKPKPATRIDFCA--SDTIP 229 (357)
T ss_dssp -EEETTTTEEEEEECCCSS-C--------EEEEEECTTCSSCEEEEET---TSCEEECCTTSSSCBCBCCCTT--CCSCE
T ss_pred -EEECCCCcEEEEEcCCCC-C--------EEEEEEccCCCceeeeecc---CCceEEEECCCCceeeeeeecc--ccccc
Confidence 88887764322 111000 0 111211 221 2222222 2367778887654321 11111 11111
Q ss_pred eEEEE---CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCC-cEEEE-eeCCeEEEEECCCCcEE
Q 037345 257 ILGVY---DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNG-SFFIE-SNTNQLLLYDPNTRALR 331 (357)
Q Consensus 257 ~l~~~---~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~i~~~-~~~~~~~~yd~~t~~~~ 331 (357)
.-+.. ++.+.++.. ....+.||-++... ....+.....-..-+.+..++ .++.. ..++.+..||+++++..
T Consensus 230 ~~v~~sp~~~~~la~g~--~d~~i~~wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 230 TSVTWHPEKDDTFACGD--ETGNVSLVNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp EEEEECTTSTTEEEEEE--SSSCEEEEESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred cchhhhhcccceEEEee--cccceeEEECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 22222 345544444 46789999887621 112232222223344555554 44443 44788999999998875
Q ss_pred Ee
Q 037345 332 DV 333 (357)
Q Consensus 332 ~v 333 (357)
+.
T Consensus 306 ~~ 307 (357)
T 4g56_B 306 RD 307 (357)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 97
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=62.85 E-value=15 Score=31.85 Aligned_cols=96 Identities=7% Similarity=0.048 Sum_probs=48.5
Q ss_pred CEEEEEECCCcceeEec-CCCCCCCCCCe-EEE-ECCeEEEEEecCCCCeEEEEEEcC-CeeEEEEEEccCCceeEEEEE
Q 037345 230 QEILSFHMRDEAFHVIK-CPDNSYFPNPI-LGV-YDNSLHFLDFDRSESCFEKWVMKE-GSWTKQLSVGPILGVLRALEF 305 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~-lP~~~~~~~~~-l~~-~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~ 305 (357)
..|..+|+.+..+..+. +... ..... +.. .+|++.+.+. .+..+.||-++. ..|.....+........-+.+
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s--~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 108 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDH--DKIVTCVDWAPKSNRIVTCS--QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW 108 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCC--SSCEEEEEECTTTCCEEEEE--TTSSEEEC------CCCCEEECCCCSSCEEEEEC
T ss_pred CEEEEEEccCCceEEEEEEecC--CceEEEEEEeCCCCEEEEEe--CCCeEEEEEcCCCCceeeeeEecccCCceEEEEE
Confidence 46777777777655432 2211 11112 222 2466555444 467899999998 436666655433333344455
Q ss_pred eeCCcEEEE-eeCCeEEEEECCCCc
Q 037345 306 WKNGSFFIE-SNTNQLLLYDPNTRA 329 (357)
Q Consensus 306 ~~~~~i~~~-~~~~~~~~yd~~t~~ 329 (357)
..++..++. ..++.+..||+++++
T Consensus 109 ~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 109 SPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp CTTSSCCEEEESSSCEEECCC----
T ss_pred CCCCCEEEEEecCCeEEEEEECCcc
Confidence 556665444 457889999999886
No 98
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=62.79 E-value=72 Score=27.18 Aligned_cols=106 Identities=10% Similarity=0.099 Sum_probs=57.9
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEcc
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGP 295 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~ 295 (357)
+|.+||..... ..|..+|..+.+...+..|.... .....-+|++.+... ..+.+|-.+.++.........
T Consensus 60 ~~~l~~~d~~~---~~i~~~d~~~~~~~~~~~~~~v~---~i~~~~dg~l~v~~~----~gl~~~d~~~g~~~~~~~~~~ 129 (326)
T 2ghs_A 60 SGTAWWFNILE---RELHELHLASGRKTVHALPFMGS---ALAKISDSKQLIASD----DGLFLRDTATGVLTLHAELES 129 (326)
T ss_dssp TTEEEEEEGGG---TEEEEEETTTTEEEEEECSSCEE---EEEEEETTEEEEEET----TEEEEEETTTCCEEEEECSST
T ss_pred CCEEEEEECCC---CEEEEEECCCCcEEEEECCCcce---EEEEeCCCeEEEEEC----CCEEEEECCCCcEEEEeeCCC
Confidence 37899987543 58999999998887776653221 112245788776542 233333332344433322211
Q ss_pred CC--ceeEEEEEeeCCcEEEEee-------CCeEEEEECCCCcEEEe
Q 037345 296 IL--GVLRALEFWKNGSFFIESN-------TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 296 ~~--~~~~~~~~~~~~~i~~~~~-------~~~~~~yd~~t~~~~~v 333 (357)
.. ....-+.+..+|.+++... ...++.+| +++++.+
T Consensus 130 ~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 130 DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 11 1123344555677776543 24688888 5666654
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=62.13 E-value=71 Score=26.90 Aligned_cols=66 Identities=12% Similarity=0.060 Sum_probs=40.2
Q ss_pred CCe-EEEEEecCCCCeEEEEEEcC-----------------CeeEEEEEEccCCceeEEEEEeeCCcEEE--EeeCCeEE
Q 037345 262 DNS-LHFLDFDRSESCFEKWVMKE-----------------GSWTKQLSVGPILGVLRALEFWKNGSFFI--ESNTNQLL 321 (357)
Q Consensus 262 ~g~-L~l~~~~~~~~~~~iW~l~~-----------------~~W~~~~~i~~~~~~~~~~~~~~~~~i~~--~~~~~~~~ 321 (357)
+|+ +.+.+. .+..+.||-++. +++.....+........-+.+..++..++ ...++.+.
T Consensus 270 ~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 270 QNRELFLTAG--GAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp TEEEEEEEEE--TTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred CCCcEEEEEe--CCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence 455 444443 467999999985 14455555543333344556666777655 34488999
Q ss_pred EEECCCCc
Q 037345 322 LYDPNTRA 329 (357)
Q Consensus 322 ~yd~~t~~ 329 (357)
.||+++.+
T Consensus 348 iw~~~~~~ 355 (357)
T 3i2n_A 348 VLIVTKLN 355 (357)
T ss_dssp EEEECC--
T ss_pred EEECCCcc
Confidence 99998653
No 100
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=62.09 E-value=84 Score=27.73 Aligned_cols=194 Identities=13% Similarity=0.109 Sum_probs=96.7
Q ss_pred ecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceE
Q 037345 101 GNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTE 180 (357)
Q Consensus 101 ~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (357)
+..+|.|...+....+++.+++.++....+-...... ..++.+|+..+...+.- .. ....+
T Consensus 124 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~---------p~glavd~~~g~lY~~d----~~------~~~I~ 184 (386)
T 3v65_B 124 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES---------PGGLAVDWVHDKLYWTD----SG------TSRIE 184 (386)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSC---------CCCEEEETTTTEEEEEE----TT------TTEEE
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCC---------ccEEEEEeCCCeEEEEc----CC------CCeEE
Confidence 3456777777765567788888776544432222111 34677776555322211 11 11333
Q ss_pred EEEEEcCCCceeecccCCcccccccCCCCCcceE---ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCe
Q 037345 181 VILHTLSTDSWRYLKANELSDYSFLGGQQSENTY---LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPI 257 (357)
Q Consensus 181 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~ 257 (357)
+++..+..-+.+... .+.. -.++. .+|.|||..... ...|..+|++...-..+--. ... .-..
T Consensus 185 --~~~~dg~~~~~l~~~---~l~~-----P~giavdp~~g~ly~td~~~--~~~I~r~~~dG~~~~~~~~~-~~~-~PnG 250 (386)
T 3v65_B 185 --VANLDGAHRKVLLWQ---SLEK-----PRAIALHPMEGTIYWTDWGN--TPRIEASSMDGSGRRIIADT-HLF-WPNG 250 (386)
T ss_dssp --ECBTTSCSCEEEECS---SCSC-----EEEEEEETTTTEEEEEECSS--SCEEEEEETTSCSCEEEECS-SCS-CEEE
T ss_pred --EEeCCCCceEEeecC---CCCC-----CcEEEEEcCCCeEEEeccCC--CCEEEEEeCCCCCcEEEEEC-CCC-Ceee
Confidence 666554332222110 1110 12333 368999987543 36899999987654443211 111 0113
Q ss_pred EEE--ECCeEEEEEecCCCCeEEEEEEcC-CeeEEEEEEccCCceeEEEEEe-eCCcEEEEee-CCeEEEEEC-CCCcEE
Q 037345 258 LGV--YDNSLHFLDFDRSESCFEKWVMKE-GSWTKQLSVGPILGVLRALEFW-KNGSFFIESN-TNQLLLYDP-NTRALR 331 (357)
Q Consensus 258 l~~--~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~-~~~~i~~~~~-~~~~~~yd~-~t~~~~ 331 (357)
|+. .+|+|+++... ... |+..+- ++=.+. .+.. .+..|.++. .++.+|+... ...+..+|. ..+..+
T Consensus 251 lavd~~~~~lY~aD~~--~~~--I~~~d~dG~~~~~-~~~~--~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~ 323 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAK--HHV--IERANLDGSHRKA-VISQ--GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQE 323 (386)
T ss_dssp EEEEGGGTEEEEEETT--TTE--EEEECTTSCSCEE-EECS--SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred EEEeCCCCEEEEEECC--CCE--EEEEeCCCCeeEE-EEEC--CCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceE
Confidence 444 36788887753 344 444443 211111 1211 133455554 3456666654 568999994 444455
Q ss_pred Eee
Q 037345 332 DVG 334 (357)
Q Consensus 332 ~v~ 334 (357)
.+.
T Consensus 324 ~i~ 326 (386)
T 3v65_B 324 IIR 326 (386)
T ss_dssp EEE
T ss_pred EEc
Confidence 553
No 101
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=61.81 E-value=81 Score=27.47 Aligned_cols=94 Identities=7% Similarity=0.047 Sum_probs=50.3
Q ss_pred CEEEEEECCCcc--eeEecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcC-CeeEEEEE------EccCCcee
Q 037345 230 QEILSFHMRDEA--FHVIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKE-GSWTKQLS------VGPILGVL 300 (357)
Q Consensus 230 ~~i~~fD~~~e~--~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~------i~~~~~~~ 300 (357)
..|..+|+.+.. ...+..... ..-..+...+|++.+.+. .+..+.||-+.+ ..=..... +.......
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~l~s~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v 388 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEG--TPINNVYFAAGALFVSSG--FDTSIKLDIISDPESERPAIEFETPTFLVSNDDAV 388 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTT--SCEEEEEEETTEEEEEET--TTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCC
T ss_pred CeEEEEEcCCCcCchhhhhccCC--CCceEEEeCCCCEEEEec--CCccEEEEeccCCCCCccceeccCccEEccCCcce
Confidence 488889998754 233332111 111223445677554443 568999999987 11111111 11111223
Q ss_pred EEEEEeeCCc----EEEEeeCCeEEEEECCC
Q 037345 301 RALEFWKNGS----FFIESNTNQLLLYDPNT 327 (357)
Q Consensus 301 ~~~~~~~~~~----i~~~~~~~~~~~yd~~t 327 (357)
.-+++..++. ++....++.+..|+++.
T Consensus 389 ~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 389 SQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 3344444544 77777788899999875
No 102
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=60.69 E-value=74 Score=26.65 Aligned_cols=132 Identities=14% Similarity=0.137 Sum_probs=75.5
Q ss_pred EEEEEcCCCceee-cccCCcccccccCCCCCcc-eEECceEEEEEccCCCcCEEEEEECCCcce-eEecCCCCCCCCCCe
Q 037345 181 VILHTLSTDSWRY-LKANELSDYSFLGGQQSEN-TYLDRICYWIAWRYNNCQEILSFHMRDEAF-HVIKCPDNSYFPNPI 257 (357)
Q Consensus 181 ~~vyss~t~~W~~-~~~~~~~~~~~~~~~~~~~-v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~-~~i~lP~~~~~~~~~ 257 (357)
+++++..|++=.. +...+. .+ ..+ ...++.+|.+.+.. ..+.+||.++.+- ..|+.|.. + ..
T Consensus 67 v~~vD~~Tgkv~~~~~l~~~-~F-------geGit~~g~~ly~ltw~~---~~v~v~D~~t~~~~~ti~~~~e--G--~g 131 (262)
T 3nol_A 67 IRKVDIESGKTLQQIELGKR-YF-------GEGISDWKDKIVGLTWKN---GLGFVWNIRNLRQVRSFNYDGE--G--WG 131 (262)
T ss_dssp EEEECTTTCCEEEEEECCTT-CC-------EEEEEEETTEEEEEESSS---SEEEEEETTTCCEEEEEECSSC--C--CC
T ss_pred EEEEECCCCcEEEEEecCCc-cc-------eeEEEEeCCEEEEEEeeC---CEEEEEECccCcEEEEEECCCC--c--eE
Confidence 4489988875422 221110 11 222 34577999998764 6899999987554 56777642 2 24
Q ss_pred EEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccC---Cce--eEEEEEeeCCcEEEEee-CCeEEEEECCCCcEE
Q 037345 258 LGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPI---LGV--LRALEFWKNGSFFIESN-TNQLLLYDPNTRALR 331 (357)
Q Consensus 258 l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~---~~~--~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~ 331 (357)
|..-+++|++... .. .||.++-.+=....+|... ..+ ..-+.+ .+|.+|.... ++.+...|++|+++.
T Consensus 132 lt~dg~~L~~SdG---s~--~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~-~~G~lyan~w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 132 LTHNDQYLIMSDG---TP--VLRFLDPESLTPVRTITVTAHGEELPELNELEW-VDGEIFANVWQTNKIVRIDPETGKVT 205 (262)
T ss_dssp EEECSSCEEECCS---SS--EEEEECTTTCSEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTSSEEEEECTTTCBEE
T ss_pred EecCCCEEEEECC---CC--eEEEEcCCCCeEEEEEEeccCCccccccceeEE-ECCEEEEEEccCCeEEEEECCCCcEE
Confidence 5554555666442 22 3777776222233333321 111 112333 3678776543 778999999999985
Q ss_pred Ee
Q 037345 332 DV 333 (357)
Q Consensus 332 ~v 333 (357)
..
T Consensus 206 ~~ 207 (262)
T 3nol_A 206 GI 207 (262)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 103
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=60.09 E-value=74 Score=26.45 Aligned_cols=193 Identities=12% Similarity=0.107 Sum_probs=93.9
Q ss_pred ecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceE
Q 037345 101 GNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTE 180 (357)
Q Consensus 101 ~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (357)
-+.+|-.++.......+.++|..+++.......... . . ....+.+.+. +.+-++. ... ..
T Consensus 105 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~-~-----~i~~~~~~~~-~~~l~~~---~~d-------g~-- 164 (337)
T 1gxr_A 105 LLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS-A-P-----ACYALAISPD-SKVCFSC---CSD-------GN-- 164 (337)
T ss_dssp ECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECS-S-S-----CEEEEEECTT-SSEEEEE---ETT-------SC--
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccC-C-C-----ceEEEEECCC-CCEEEEE---eCC-------Cc--
Confidence 344554444443344788999888763322211110 0 1 1345666553 2332221 111 14
Q ss_pred EEEEEcCCCceeecccCCcccccccCCCCCcceEE--CceEEEEEccCCCcCEEEEEECCCcceeE-ecCCCCCCCCCCe
Q 037345 181 VILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL--DRICYWIAWRYNNCQEILSFHMRDEAFHV-IKCPDNSYFPNPI 257 (357)
Q Consensus 181 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~i~~fD~~~e~~~~-i~lP~~~~~~~~~ 257 (357)
+++|+.+++.-...-.... .. ..++.+ +|........ ...|..+|+.+.+-.. +..+... ..
T Consensus 165 v~~~d~~~~~~~~~~~~~~--~~------i~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~~~~v----~~ 229 (337)
T 1gxr_A 165 IAVWDLHNQTLVRQFQGHT--DG------ASCIDISNDGTKLWTGGL---DNTVRSWDLREGRQLQQHDFTSQI----FS 229 (337)
T ss_dssp EEEEETTTTEEEEEECCCS--SC------EEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEECSSCE----EE
T ss_pred EEEEeCCCCceeeeeeccc--Cc------eEEEEECCCCCEEEEEec---CCcEEEEECCCCceEeeecCCCce----EE
Confidence 3488888765322111000 00 111222 4544444332 2478889988765432 3322211 12
Q ss_pred EEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEE-eeCCeEEEEECCCCcEEEe
Q 037345 258 LGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIE-SNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 258 l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~~v 333 (357)
+.. .+|++.++.. ....+.+|-++... ...+........-+.+..++..++. ..++.+..||+++++....
T Consensus 230 ~~~s~~~~~l~~~~--~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~ 302 (337)
T 1gxr_A 230 LGYCPTGEWLAVGM--ESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ 302 (337)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEECCCCCEEEEEc--CCCcEEEEECCCCC---eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE
Confidence 222 2566555554 36789999888721 1222222223344555666776555 4478899999999887644
No 104
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=59.08 E-value=78 Score=26.39 Aligned_cols=101 Identities=9% Similarity=-0.010 Sum_probs=56.2
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEc
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVG 294 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~ 294 (357)
+|.+||..... ..|..+|+.+.+...+..|.... .++. .+|+|.+.. ...+.++-.+.+.........
T Consensus 24 ~~~l~~~d~~~---~~i~~~d~~~~~~~~~~~~~~~~----~i~~~~dG~l~v~~----~~~l~~~d~~~g~~~~~~~~~ 92 (297)
T 3g4e_A 24 SNSLLFVDIPA---KKVCRWDSFTKQVQRVTMDAPVS----SVALRQSGGYVATI----GTKFCALNWKEQSAVVLATVD 92 (297)
T ss_dssp TTEEEEEETTT---TEEEEEETTTCCEEEEECSSCEE----EEEEBTTSSEEEEE----TTEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEECCC---CEEEEEECCCCcEEEEeCCCceE----EEEECCCCCEEEEE----CCeEEEEECCCCcEEEEEecC
Confidence 47999987653 58999999998887776654321 2232 367755443 234444444335544443332
Q ss_pred cCCcee--EEEEEeeCCcEEEEee------------CCeEEEEECCC
Q 037345 295 PILGVL--RALEFWKNGSFFIESN------------TNQLLLYDPNT 327 (357)
Q Consensus 295 ~~~~~~--~~~~~~~~~~i~~~~~------------~~~~~~yd~~t 327 (357)
...... .-+.+..+|.+++... .+.++.+|.+.
T Consensus 93 ~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 93 NDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp TTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 211222 2344455677776542 13677777763
No 105
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=58.78 E-value=77 Score=26.25 Aligned_cols=205 Identities=12% Similarity=0.125 Sum_probs=98.6
Q ss_pred ccceEEEe-------ecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCC
Q 037345 103 CNGLFCLH-------DKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKD 175 (357)
Q Consensus 103 ~~GLll~~-------~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~ 175 (357)
.+|-+.+. ......++++||.+++...+..+...... ....++.+|+..+..-|. .. .
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~-----~~~~~i~~~~~~g~l~v~---~~-~------ 91 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYG-----GIPAGCQCDRDANQLFVA---DM-R------ 91 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEE-----CCEEEEEECSSSSEEEEE---ET-T------
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCC-----CCCceEEEecCCCcEEEE---EC-C------
Confidence 45666555 22234688999999887655431110000 114567777653332111 11 1
Q ss_pred CcceEEEEEEcCCCceeec-ccCCcccccccCCCCCcceE--ECceEEEEEccCC------------CcCEEEEEECCCc
Q 037345 176 SVSTEVILHTLSTDSWRYL-KANELSDYSFLGGQQSENTY--LDRICYWIAWRYN------------NCQEILSFHMRDE 240 (357)
Q Consensus 176 ~~~~~~~vyss~t~~W~~~-~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~------------~~~~i~~fD~~~e 240 (357)
.. +.+|+.. +..+.+ ..... ..+.. .-..+. -+|.+|+...... ....|..+|.. .
T Consensus 92 -~~--l~~~d~~-g~~~~~~~~~~~-~~~~~---~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (314)
T 1pjx_A 92 -LG--LLVVQTD-GTFEEIAKKDSE-GRRMQ---GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G 162 (314)
T ss_dssp -TE--EEEEETT-SCEEECCSBCTT-SCBCB---CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S
T ss_pred -CC--EEEEeCC-CCEEEEEeccCC-Ccccc---CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C
Confidence 13 3378877 665544 22111 11100 022333 3677776553210 01478899987 5
Q ss_pred ceeEecCCCCCCCCCCeEE-E----ECCe-EEEEEecCCCCeEEEEEEc-CCeeEEEEEEccCC----ceeEEEEEeeCC
Q 037345 241 AFHVIKCPDNSYFPNPILG-V----YDNS-LHFLDFDRSESCFEKWVMK-EGSWTKQLSVGPIL----GVLRALEFWKNG 309 (357)
Q Consensus 241 ~~~~i~lP~~~~~~~~~l~-~----~~g~-L~l~~~~~~~~~~~iW~l~-~~~W~~~~~i~~~~----~~~~~~~~~~~~ 309 (357)
++..+.-... .. ..+. . .+|+ |++... ....+.+|-++ ++.......+.... ....-+.+..+|
T Consensus 163 ~~~~~~~~~~--~~-~~i~~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 163 QMIQVDTAFQ--FP-NGIAVRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN 237 (314)
T ss_dssp CEEEEEEEES--SE-EEEEEEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC
T ss_pred CEEEeccCCC--Cc-ceEEEecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC
Confidence 5543311000 00 1222 2 3453 555543 35677777765 34433322221111 223334555668
Q ss_pred cEEEEee-CCeEEEEECCCCc-EEEeeec
Q 037345 310 SFFIESN-TNQLLLYDPNTRA-LRDVGLG 336 (357)
Q Consensus 310 ~i~~~~~-~~~~~~yd~~t~~-~~~v~~~ 336 (357)
.+++... ++.+..||+++++ .+.+..+
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~~~~~~~~~ 266 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQPKMRIRCP 266 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBSCSEEEECS
T ss_pred CEEEEEcCCCEEEEEcCCCCcEeEEEeCC
Confidence 8888754 6789999999554 4555444
No 106
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=58.62 E-value=79 Score=26.31 Aligned_cols=94 Identities=12% Similarity=0.109 Sum_probs=50.6
Q ss_pred EEEEEECCCcceeEecCCCCCCCCCCeEE-EECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCC
Q 037345 231 EILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNG 309 (357)
Q Consensus 231 ~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~ 309 (357)
.|..+|+.+.+...+..+...... ..+. .-+|+..++. ...+.+|-++..+ ....+.... ...-+.+..+|
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~----~~~v~~~d~~~~~--~~~~~~~~~-~~~~~~~s~dg 291 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFY-FSTAVNPAKTRAFGA----YNVLESFDLEKNA--SIKRVPLPH-SYYSVNVSTDG 291 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCE-EEEEECTTSSEEEEE----ESEEEEEETTTTE--EEEEEECSS-CCCEEEECTTS
T ss_pred ceEEEeCCCCCceEeecCCCCCce-eeEEECCCCCEEEEe----CCeEEEEECCCCc--CcceecCCC-ceeeEEECCCC
Confidence 588999998877644443221100 1122 2245543333 2567777666532 222332211 12334556667
Q ss_pred cE-EEEeeCCeEEEEECCCCcEEE
Q 037345 310 SF-FIESNTNQLLLYDPNTRALRD 332 (357)
Q Consensus 310 ~i-~~~~~~~~~~~yd~~t~~~~~ 332 (357)
+. ++...++.+..||+++++...
T Consensus 292 ~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 292 STVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp CEEEEESBSSEEEEEETTTCCEEE
T ss_pred CEEEEEcCCCcEEEEECcCCcEEE
Confidence 64 444457889999999887643
No 107
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=58.00 E-value=93 Score=26.95 Aligned_cols=109 Identities=9% Similarity=0.098 Sum_probs=55.0
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLS 292 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~ 292 (357)
.+|.+||..... ..|..+|++...-..+-. ...... ..+++. +|.|+..... ....+...-++. +-.+ .
T Consensus 126 ~~g~ly~~d~~~---~~I~~~~~dG~~~~~l~~-~~l~~P-~~iavdp~~g~ly~td~~-~~~~I~r~~~dG-~~~~--~ 196 (349)
T 3v64_C 126 VHDKLYWTDSGT---SRIEVANLDGAHRKVLLW-QSLEKP-RAIALHPMEGTIYWTDWG-NTPRIEASSMDG-SGRR--I 196 (349)
T ss_dssp TTTEEEEEETTT---TEEEEEETTSCSCEEEEC-TTCSCE-EEEEEETTTTEEEEEECS-SSCEEEEEETTS-CSCE--E
T ss_pred CCCeEEEEcCCC---CeEEEEcCCCCceEEEEe-CCCCCc-ceEEEecCcCeEEEeccC-CCCEEEEEeCCC-CCcE--E
Confidence 378999998653 589999998765443321 111111 234443 6778876652 113443333332 1111 1
Q ss_pred EccCCceeEEE--EEe-eCCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 293 VGPILGVLRAL--EFW-KNGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 293 i~~~~~~~~~~--~~~-~~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
+-. ..+..|. ++. .++.+|+... ...+..+|++....+.+
T Consensus 197 ~~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 197 IAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 240 (349)
T ss_dssp SCC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred EEE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEE
Confidence 111 1223343 343 2455666543 45677788776554444
No 108
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=57.96 E-value=1.4e+02 Score=28.79 Aligned_cols=113 Identities=9% Similarity=0.131 Sum_probs=59.8
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCc---ceeEecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcC-CeeEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDE---AFHVIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKE-GSWTKQ 290 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e---~~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~ 290 (357)
-++.+|+.+..+.....|+..|+++. .|+.+ .|..... ......++.|.+.... ...-.|++++- +.+.+.
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~--~~~s~~g~~lv~~~~~--~g~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL-IPERQQV--LTVHSGSGYLFAEYMV--DATARVEQFDYEGKRVRE 364 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE-ECCCSSC--EEEEEETTEEEEEEEE--TTEEEEEEECTTSCEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE-ecCCCCE--EEEEEECCEEEEEEEE--CCeeEEEEEECCCCeeEE
Confidence 35688888765434578999999874 35643 2322211 1233334556655554 33334555543 444333
Q ss_pred EEEccCCceeEEEEEe-eCCcEEEEeeC----CeEEEEECCCCcEEEe
Q 037345 291 LSVGPILGVLRALEFW-KNGSFFIESNT----NQLLLYDPNTRALRDV 333 (357)
Q Consensus 291 ~~i~~~~~~~~~~~~~-~~~~i~~~~~~----~~~~~yd~~t~~~~~v 333 (357)
..++. ......+... +++.+++...+ ..++.||+++++.+.+
T Consensus 365 l~~p~-~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l 411 (693)
T 3iuj_A 365 VALPG-LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLY 411 (693)
T ss_dssp ECCSS-SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEE
T ss_pred eecCC-CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEE
Confidence 22221 1111122222 23456665443 7899999999988776
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=57.25 E-value=82 Score=26.10 Aligned_cols=66 Identities=18% Similarity=0.225 Sum_probs=44.0
Q ss_pred CeEEEEEecCCCCeEEEEEEcC-------CeeEEEEEEccCCceeEEEEEeeC--CcEEEE-eeCCeEEEEECCCCcE
Q 037345 263 NSLHFLDFDRSESCFEKWVMKE-------GSWTKQLSVGPILGVLRALEFWKN--GSFFIE-SNTNQLLLYDPNTRAL 330 (357)
Q Consensus 263 g~L~l~~~~~~~~~~~iW~l~~-------~~W~~~~~i~~~~~~~~~~~~~~~--~~i~~~-~~~~~~~~yd~~t~~~ 330 (357)
|.+.+++. .+..+.||-++. ..|.....+........-+.+..+ +..++. ..++.+..||+++++.
T Consensus 71 ~~~l~s~~--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 146 (351)
T 3f3f_A 71 GRIIASAS--YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSD 146 (351)
T ss_dssp CSEEEEEE--TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTC
T ss_pred CCEEEEEc--CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHH
Confidence 66655555 467899999986 456666666543333445555555 665554 4578999999987763
No 110
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=56.40 E-value=95 Score=27.92 Aligned_cols=110 Identities=10% Similarity=0.062 Sum_probs=61.8
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEE-ECCe-EEEEEecCCC-CeEEEEEEcCCeeEEEEE
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGV-YDNS-LHFLDFDRSE-SCFEKWVMKEGSWTKQLS 292 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~-L~l~~~~~~~-~~~~iW~l~~~~W~~~~~ 292 (357)
+|.||+.... ..|..||+++.....+-.+.. .. ..+.. .+|+ |+++...... ....+|...+..+.....
T Consensus 149 ~g~Lyv~d~~----~~I~~id~~~~~v~~~~~~~~--~P-~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~ 221 (430)
T 3tc9_A 149 HNHLYLVGEQ----HPTRLIDFEKEYVSTVYSGLS--KV-RTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITE 221 (430)
T ss_dssp EEEEEEEEBT----EEEEEEETTTTEEEEEECCCS--CE-EEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEE
T ss_pred CCeEEEEeCC----CcEEEEECCCCEEEEEecCCC--Cc-ceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeee
Confidence 4899988754 489999999988776532111 11 12332 3566 7777653222 334555555544442222
Q ss_pred EccCCceeEEEEEee-CCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 293 VGPILGVLRALEFWK-NGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 293 i~~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
+.... ...-+++.. +|.+|+... .+++..||+++++...+
T Consensus 222 l~~~~-~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 222 LTKGQ-NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp EEECS-SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eccCC-CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 22111 122334555 577777654 56889999988876443
No 111
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=56.24 E-value=90 Score=29.68 Aligned_cols=112 Identities=13% Similarity=0.056 Sum_probs=59.6
Q ss_pred CcceEECceEEEEEc-cCCCcCEEEEEEC-CC--cceeEecCCCCC--------CCCCCeEEE--ECCe----EEEEEec
Q 037345 210 SENTYLDRICYWIAW-RYNNCQEILSFHM-RD--EAFHVIKCPDNS--------YFPNPILGV--YDNS----LHFLDFD 271 (357)
Q Consensus 210 ~~~v~~~G~lyw~~~-~~~~~~~i~~fD~-~~--e~~~~i~lP~~~--------~~~~~~l~~--~~g~----L~l~~~~ 271 (357)
..++..+|.+|.... .. .+.++|. .+ +.|+. +++... +.....++. .+|+ +++...
T Consensus 56 ~tP~v~~g~vyv~~~~~~----~v~AlD~~~tG~~lW~~-~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN----NTFALGLDDPGTILWQD-KPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp SCCEEETTEEEEECSTTT----CEEEEETTCTTSEEEEE-CCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred eccEEECCEEEEEeCCCC----EEEEEeCCCCCcEEEEE-CCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 668889999998875 44 7999999 54 45554 222110 011122344 4565 655432
Q ss_pred CCCCeEEEEEEcC----CeeEEEEEE-ccCCce-eEEEEEeeCCcEEEEee------CCeEEEEECCCCcEEEe
Q 037345 272 RSESCFEKWVMKE----GSWTKQLSV-GPILGV-LRALEFWKNGSFFIESN------TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 272 ~~~~~~~iW~l~~----~~W~~~~~i-~~~~~~-~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~v 333 (357)
.. .+..++. ..|.....- .....+ ..|+. .++.||+-.. ++.++.||.+|++...-
T Consensus 130 --dg--~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v--~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 130 --DG--NVAALNAETGETVWKVENSDIKVGSTLTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp --TS--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred --CC--EEEEEECCCCCEEEeecCCCCCccceeecCCEE--ECCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 12 2344442 446543210 000011 23332 2456665442 57899999999987643
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=55.69 E-value=1.1e+02 Score=26.87 Aligned_cols=194 Identities=13% Similarity=0.069 Sum_probs=96.4
Q ss_pred cccceEEEeecCCCeEEEEeccccchhc-CCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceE
Q 037345 102 NCNGLFCLHDKNSNRISIWNLATREFRA-LPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTE 180 (357)
Q Consensus 102 s~~GLll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (357)
+.+|-+++.......+.++|+.+++... ++.... . ...+.+++..+ +-++. .... ..
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~----~------~~~~~~~~~~~-~l~~~--~~~~-------~~-- 235 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGK----W------SKILLYDPIRD-LVYCS--NWIS-------ED-- 235 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSS----S------EEEEEEETTTT-EEEEE--ETTT-------TE--
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCC----C------eeEEEEcCCCC-EEEEE--ecCC-------Cc--
Confidence 4566666665554578899988765432 321110 1 44566666433 22111 1111 14
Q ss_pred EEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCC-----CcCEEEEEECCCcceeE-ecCCCCCCCC
Q 037345 181 VILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYN-----NCQEILSFHMRDEAFHV-IKCPDNSYFP 254 (357)
Q Consensus 181 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~-----~~~~i~~fD~~~e~~~~-i~lP~~~~~~ 254 (357)
+++|+..++.....-.... .+. .-.+.-+|...+...... ....|..+|+.+.+... +..+...
T Consensus 236 i~~~d~~~~~~~~~~~~~~--~~~-----~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~--- 305 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDKIG--LPR-----GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNK--- 305 (433)
T ss_dssp EEEEETTTTEEEEECCCCS--EEE-----EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECE---
T ss_pred EEEEECCCCcEEEEecCCC--Cce-----EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCc---
Confidence 4488888775432111100 000 111122454444433210 12478899998775533 2222111
Q ss_pred CCeEE-EECCe-EEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEee----------------
Q 037345 255 NPILG-VYDNS-LHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESN---------------- 316 (357)
Q Consensus 255 ~~~l~-~~~g~-L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~---------------- 316 (357)
..+. ..+|+ |++... ....+.+|-++..+ ....+... .-..-+.+..+|..++...
T Consensus 306 -~~~~~~~~g~~l~~~~~--~~~~v~v~d~~~~~--~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~ 379 (433)
T 3bws_A 306 -RHIVSGNTENKIYVSDM--CCSKIEVYDLKEKK--VQKSIPVF-DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLV 379 (433)
T ss_dssp -EEEEECSSTTEEEEEET--TTTEEEEEETTTTE--EEEEEECS-SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSS
T ss_pred -ceEEECCCCCEEEEEec--CCCEEEEEECCCCc--EEEEecCC-CCCCeEEEcCCCCEEEEEecCCCcccccccccccc
Confidence 1122 22454 555444 46789999887632 22333322 2234455666676544433
Q ss_pred CCeEEEEECCCCcEEEe
Q 037345 317 TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 317 ~~~~~~yd~~t~~~~~v 333 (357)
++.+..||+++++....
T Consensus 380 dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 380 LGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp CCEEEEEETTTTEEEEE
T ss_pred ceEEEEEECCCCcEEEE
Confidence 24899999999887554
No 113
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=55.39 E-value=89 Score=25.89 Aligned_cols=66 Identities=11% Similarity=0.127 Sum_probs=42.4
Q ss_pred CCeEEEEEecCCCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEee--CCcEEEE-eeCCeEEEEECCCCc
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWK--NGSFFIE-SNTNQLLLYDPNTRA 329 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~--~~~i~~~-~~~~~~~~yd~~t~~ 329 (357)
+|++.+++. .+..+.||-++. ..+.....+.....-..-+.+.. ++.+++. ..++.+..||+++++
T Consensus 22 ~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 22 YGRHVATCS--SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp SSSEEEEEE--TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTS
T ss_pred CCCEEEEee--CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCc
Confidence 566544444 467999999996 66666666653333334445544 3666555 447889999998863
No 114
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=54.70 E-value=91 Score=25.85 Aligned_cols=197 Identities=7% Similarity=0.048 Sum_probs=95.5
Q ss_pred EecccceEEEeecCCCeEEEEeccccchhcC-CCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcc
Q 037345 100 LGNCNGLFCLHDKNSNRISIWNLATREFRAL-PKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVS 178 (357)
Q Consensus 100 ~~s~~GLll~~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~ 178 (357)
.-+.+|-+++... ...+.|||..+++.... ......... .....+.+.+.. .+-++. ... ..
T Consensus 58 ~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~-~~l~~~---~~d-------~~ 120 (337)
T 1gxr_A 58 TISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRD-----NYIRSCKLLPDG-CTLIVG---GEA-------ST 120 (337)
T ss_dssp EECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTT-----SBEEEEEECTTS-SEEEEE---ESS-------SE
T ss_pred EEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCC-----CcEEEEEEcCCC-CEEEEE---cCC-------Cc
Confidence 3344565555544 45789999887653221 111100011 114556666632 332222 111 24
Q ss_pred eEEEEEEcCCCceeecccCCcccccccCCCCCcceE--ECceEEEEEccCCCcCEEEEEECCCcceeE-ecCCCCCCCCC
Q 037345 179 TEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTY--LDRICYWIAWRYNNCQEILSFHMRDEAFHV-IKCPDNSYFPN 255 (357)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~-i~lP~~~~~~~ 255 (357)
+++|+..++.......... .... ...+. -+|........+ ..|..+|+.+.+... +.... ..
T Consensus 121 --i~~~d~~~~~~~~~~~~~~-~~~~-----i~~~~~~~~~~~l~~~~~d---g~v~~~d~~~~~~~~~~~~~~----~~ 185 (337)
T 1gxr_A 121 --LSIWDLAAPTPRIKAELTS-SAPA-----CYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHT----DG 185 (337)
T ss_dssp --EEEEECCCC--EEEEEEEC-SSSC-----EEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCS----SC
T ss_pred --EEEEECCCCCcceeeeccc-CCCc-----eEEEEECCCCCEEEEEeCC---CcEEEEeCCCCceeeeeeccc----Cc
Confidence 4499988876533221100 0000 11111 144443333322 478889988765432 22211 11
Q ss_pred C-eEEEE-CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEe-eCCeEEEEECCCCcEEE
Q 037345 256 P-ILGVY-DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIES-NTNQLLLYDPNTRALRD 332 (357)
Q Consensus 256 ~-~l~~~-~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~ 332 (357)
. .+... +|+..+++. ....+.+|-++...-. ..+..... ..-+.+..++..++.. .++.+..||+++++...
T Consensus 186 i~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~--~~~~~~~~-v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~ 260 (337)
T 1gxr_A 186 ASCIDISNDGTKLWTGG--LDNTVRSWDLREGRQL--QQHDFTSQ-IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ 260 (337)
T ss_dssp EEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEE--EEEECSSC-EEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE
T ss_pred eEEEEECCCCCEEEEEe--cCCcEEEEECCCCceE--eeecCCCc-eEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE
Confidence 1 22222 566555554 4678999988873222 22222222 3445555667766654 47889999999988766
Q ss_pred e
Q 037345 333 V 333 (357)
Q Consensus 333 v 333 (357)
+
T Consensus 261 ~ 261 (337)
T 1gxr_A 261 L 261 (337)
T ss_dssp E
T ss_pred E
Confidence 5
No 115
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=54.28 E-value=98 Score=26.09 Aligned_cols=112 Identities=14% Similarity=0.190 Sum_probs=60.5
Q ss_pred CceEEEEEccC--------------CCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEE-CCe-EEEEEecCCCCeEEE
Q 037345 216 DRICYWIAWRY--------------NNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVY-DNS-LHFLDFDRSESCFEK 279 (357)
Q Consensus 216 ~G~lyw~~~~~--------------~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~-~g~-L~l~~~~~~~~~~~i 279 (357)
+|.+|+..... .....|..+|..+.+...+.-... .. -.++.. +|+ |+++... ..++.+
T Consensus 137 ~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~--~p-~gia~~~dg~~lyv~d~~--~~~I~~ 211 (322)
T 2fp8_A 137 TGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH--VP-GGAEVSADSSFVLVAEFL--SHQIVK 211 (322)
T ss_dssp TCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES--CC-CEEEECTTSSEEEEEEGG--GTEEEE
T ss_pred CCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc--cC-cceEECCCCCEEEEEeCC--CCeEEE
Confidence 67888765331 112479999998877654321000 00 123332 455 6665542 345555
Q ss_pred EEEcC---CeeEEEEEEccCCceeEEEEEeeCCcEEEEeeC-----------CeEEEEECCCCcEEEeeec
Q 037345 280 WVMKE---GSWTKQLSVGPILGVLRALEFWKNGSFFIESNT-----------NQLLLYDPNTRALRDVGLG 336 (357)
Q Consensus 280 W~l~~---~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~yd~~t~~~~~v~~~ 336 (357)
+-++. ........ ... ..-+.+..+|.+++.... ..++.||++.+.++.+..+
T Consensus 212 ~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 212 YWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp EESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred EECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECC
Confidence 44443 23332222 112 333445556788876543 5699999988777777554
No 116
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=52.97 E-value=1.6e+02 Score=28.54 Aligned_cols=56 Identities=16% Similarity=0.266 Sum_probs=33.4
Q ss_pred cceEE---CceEEEEEccCCCcCEEEEEECCCcceeEe-cCCCCCCCCCCeEEEECCeEEEEEe
Q 037345 211 ENTYL---DRICYWIAWRYNNCQEILSFHMRDEAFHVI-KCPDNSYFPNPILGVYDNSLHFLDF 270 (357)
Q Consensus 211 ~~v~~---~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~l~~~ 270 (357)
+++.+ +|.|||.... ...|.++|+....-..+ ..+.... .-..|...++.|+++..
T Consensus 543 nGlavd~~~~~LY~aD~~---~~~I~~~d~dG~~~~~~~~~~~~~~-~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSK---LHSISSIDVNGGNRKTILEDEKRLA-HPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp CCEEECTTTCCEEEEETT---TTEEEEECSSSSCCEEECCCSSSCS-SCCCCEEETTEEEEECS
T ss_pred cEEEEeccCCEEEEEecC---CCeEEEEccCCCceEEEEecCCcCC-CceEeEEECCEEEEEeC
Confidence 45555 4899998854 36899999986544443 2222221 11245556777777664
No 117
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=52.87 E-value=1.5e+02 Score=27.63 Aligned_cols=196 Identities=9% Similarity=0.071 Sum_probs=98.9
Q ss_pred cccceEEEeecCCCeEEEEeccccchhc-CCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceE
Q 037345 102 NCNGLFCLHDKNSNRISIWNLATREFRA-LPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTE 180 (357)
Q Consensus 102 s~~GLll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (357)
+-+|.+++.......+.|+|+.|++... ++... . ..++.+++.. +|-.+. . .. + .+.
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-----~------~~~v~~spdg-~~l~v~-~-~d-~-------~V~ 203 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-----A------VHISRMSASG-RYLLVI-G-RD-A-------RID 203 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST-----T------EEEEEECTTS-CEEEEE-E-TT-S-------EEE
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc-----c------cceEEECCCC-CEEEEE-C-CC-C-------eEE
Confidence 3467887777665678999999987543 33211 0 2355666543 332222 1 11 1 444
Q ss_pred EEEEEc--CCCceeecccCCcccccccCCCCCcceEE----Cce-EEEEEccCCCcCEEEEEECCCcce-eEecCCCCC-
Q 037345 181 VILHTL--STDSWRYLKANELSDYSFLGGQQSENTYL----DRI-CYWIAWRYNNCQEILSFHMRDEAF-HVIKCPDNS- 251 (357)
Q Consensus 181 ~~vyss--~t~~W~~~~~~~~~~~~~~~~~~~~~v~~----~G~-lyw~~~~~~~~~~i~~fD~~~e~~-~~i~lP~~~- 251 (357)
+|+. .+++- +...+....+. .-.+.- +|. +|.-... ...|..+|..+.+. ..++.+...
T Consensus 204 --v~D~~~~t~~~--~~~i~~g~~p~-----~va~sp~~~~dg~~l~v~~~~---~~~v~v~D~~t~~~~~~i~~~g~~~ 271 (543)
T 1nir_A 204 --MIDLWAKEPTK--VAEIKIGIEAR-----SVESSKFKGYEDRYTIAGAYW---PPQFAIMDGETLEPKQIVSTRGMTV 271 (543)
T ss_dssp --EEETTSSSCEE--EEEEECCSEEE-----EEEECCSTTCTTTEEEEEEEE---SSEEEEEETTTCCEEEEEECCEECS
T ss_pred --EEECcCCCCcE--EEEEecCCCcc-----eEEeCCCcCCCCCEEEEEEcc---CCeEEEEeccccccceeecccCccc
Confidence 8888 55432 11111000010 111222 564 4433322 24788899887654 445553211
Q ss_pred C------CCC-CeEEEE-CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEee--CCeEE
Q 037345 252 Y------FPN-PILGVY-DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESN--TNQLL 321 (357)
Q Consensus 252 ~------~~~-~~l~~~-~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~--~~~~~ 321 (357)
. ... ..+... +|...++... ....+.+|-.++..-.+...++. .....-+++..+|..++... ++.+.
T Consensus 272 ~~~~~~~~~~v~~i~~s~~~~~~~vs~~-~~g~i~vvd~~~~~~l~~~~i~~-~~~~~~~~~spdg~~l~va~~~~~~v~ 349 (543)
T 1nir_A 272 DTQTYHPEPRVAAIIASHEHPEFIVNVK-ETGKVLLVNYKDIDNLTVTSIGA-APFLHDGGWDSSHRYFMTAANNSNKVA 349 (543)
T ss_dssp SSCCEESCCCEEEEEECSSSSEEEEEET-TTTEEEEEECTTSSSCEEEEEEC-CSSCCCEEECTTSCEEEEEEGGGTEEE
T ss_pred CccccccCCceEEEEECCCCCEEEEEEC-CCCeEEEEEecCCCcceeEEecc-CcCccCceECCCCCEEEEEecCCCeEE
Confidence 1 101 122222 3454444443 45677777766521122234432 12234566777788655433 67899
Q ss_pred EEECCCCcEEEe
Q 037345 322 LYDPNTRALRDV 333 (357)
Q Consensus 322 ~yd~~t~~~~~v 333 (357)
.+|.+++++...
T Consensus 350 v~D~~tg~l~~~ 361 (543)
T 1nir_A 350 VIDSKDRRLSAL 361 (543)
T ss_dssp EEETTTTEEEEE
T ss_pred EEECCCCeEEEe
Confidence 999999988664
No 118
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=52.84 E-value=1e+02 Score=25.87 Aligned_cols=112 Identities=6% Similarity=-0.031 Sum_probs=57.1
Q ss_pred Cce-EEEEEccCCCcCEEEEEECCCccee-EecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEE
Q 037345 216 DRI-CYWIAWRYNNCQEILSFHMRDEAFH-VIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSV 293 (357)
Q Consensus 216 ~G~-lyw~~~~~~~~~~i~~fD~~~e~~~-~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i 293 (357)
+|. +|...... ...|..+|+.+.+.. .++..... .......-+|+..++.. ....+.+|-++...=......
T Consensus 151 dg~~l~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~--~~~~i~~~d~~~~~~~~~~~~ 224 (353)
T 3vgz_A 151 ATNTVYISGIGK--ESVIWVVDGGNIKLKTAIQNTGKM--STGLALDSEGKRLYTTN--ADGELITIDTADNKILSRKKL 224 (353)
T ss_dssp TTTEEEEEEESS--SCEEEEEETTTTEEEEEECCCCTT--CCCCEEETTTTEEEEEC--TTSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEecCC--CceEEEEcCCCCceEEEecCCCCc--cceEEECCCCCEEEEEc--CCCeEEEEECCCCeEEEEEEc
Confidence 554 55544222 357999999877654 34422221 11122333566333333 245666766655322222222
Q ss_pred ccC--CceeEEEEEeeCCcE-EEEee-CCeEEEEECCCCcEEEe
Q 037345 294 GPI--LGVLRALEFWKNGSF-FIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 294 ~~~--~~~~~~~~~~~~~~i-~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
... .....-+.+..+|+. ++... ++.+..||+++++..+.
T Consensus 225 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAK 268 (353)
T ss_dssp CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred CCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 111 122334566666764 44443 47899999998887543
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=52.65 E-value=1.7e+02 Score=28.38 Aligned_cols=96 Identities=9% Similarity=0.148 Sum_probs=58.5
Q ss_pred CEEEEEECCCcceeEec-CCCCCCCCCCeEEEE--C--CeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEE
Q 037345 230 QEILSFHMRDEAFHVIK-CPDNSYFPNPILGVY--D--NSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALE 304 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~-lP~~~~~~~~~l~~~--~--g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~ 304 (357)
..|..+|+.++....+. +... .....-+.. + |.+.+.+. .+..+.||-++.+.|.....+........-+.
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h--~~~V~~l~~s~~~~~~~l~s~s--~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~ 106 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQ 106 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCC--SSCEEEEEECCTTSCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CcEEEEecCCCCCccceeccCC--cCceEEEEecCCCCCCEEEEEe--CCCeEEEEECCCCcccccccccCCCCCeEEEE
Confidence 46777787766555432 2211 111222222 2 66555555 46789999999887877777654333344555
Q ss_pred EeeC--CcEEEE-eeCCeEEEEECCCCc
Q 037345 305 FWKN--GSFFIE-SNTNQLLLYDPNTRA 329 (357)
Q Consensus 305 ~~~~--~~i~~~-~~~~~~~~yd~~t~~ 329 (357)
+..+ +..++. ..++.+..||++++.
T Consensus 107 ~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 107 WAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp ECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred ECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 5555 666555 457899999999873
No 120
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=52.32 E-value=1.7e+02 Score=28.25 Aligned_cols=194 Identities=9% Similarity=0.051 Sum_probs=96.1
Q ss_pred EecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcce
Q 037345 100 LGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVST 179 (357)
Q Consensus 100 ~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 179 (357)
.-+.+|-.++.......+.|||..|++....-.... .. ...+.+.+.. .+ ++ .. ..+ ...
T Consensus 62 ~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~---~~------v~~~~~s~~~-~~-l~-~~-~~d-------g~i 121 (814)
T 3mkq_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP---DY------IRSIAVHPTK-PY-VL-SG-SDD-------LTV 121 (814)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS---SC------EEEEEECSSS-SE-EE-EE-ETT-------SEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCC---CC------EEEEEEeCCC-CE-EE-EE-cCC-------CEE
Confidence 334456544444444578999998887543221111 11 4456665543 23 22 11 122 244
Q ss_pred EEEEEEcCCC-ceeecccCCcccccccCCCCCcceEE---CceEEEEEccCCCcCEEEEEECCCcceeE-ecCCCCCCCC
Q 037345 180 EVILHTLSTD-SWRYLKANELSDYSFLGGQQSENTYL---DRICYWIAWRYNNCQEILSFHMRDEAFHV-IKCPDNSYFP 254 (357)
Q Consensus 180 ~~~vyss~t~-~W~~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~i~~fD~~~e~~~~-i~lP~~~~~~ 254 (357)
. +|+..++ .....-.... .. ..++.. +|........+ ..|..+|+.+..-.. +..... .
T Consensus 122 ~--vw~~~~~~~~~~~~~~~~--~~------v~~~~~~p~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~---~ 185 (814)
T 3mkq_A 122 K--LWNWENNWALEQTFEGHE--HF------VMCVAFNPKDPSTFASGCLD---RTVKVWSLGQSTPNFTLTTGQE---R 185 (814)
T ss_dssp E--EEEGGGTSEEEEEEECCS--SC------EEEEEEETTEEEEEEEEETT---SEEEEEETTCSSCSEEEECCCT---T
T ss_pred E--EEECCCCceEEEEEcCCC--Cc------EEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCcceeEEecCCC---C
Confidence 4 8887765 2211110000 00 122222 34444443332 478889987654432 222211 1
Q ss_pred CCeEEEE----CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCCc
Q 037345 255 NPILGVY----DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTRA 329 (357)
Q Consensus 255 ~~~l~~~----~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~ 329 (357)
....+.. +|.+.+++. ....+.+|-++... ....+.....-..-+.+..++.+++... ++.+..||+.+++
T Consensus 186 ~v~~~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 186 GVNYVDYYPLPDKPYMITAS--DDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp CCCEEEECCSTTCCEEEEEC--TTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CEEEEEEEECCCCCEEEEEe--CCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 1222222 566555554 46789999887633 2233332222234455666777666544 7889999999876
Q ss_pred EEEe
Q 037345 330 LRDV 333 (357)
Q Consensus 330 ~~~v 333 (357)
....
T Consensus 262 ~~~~ 265 (814)
T 3mkq_A 262 VEKT 265 (814)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6443
No 121
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=51.67 E-value=1.1e+02 Score=25.89 Aligned_cols=114 Identities=10% Similarity=0.079 Sum_probs=59.1
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCC------C-CCCCeEEEE-C-CeEEEEEecCCCCeEEEEEEcCCe
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNS------Y-FPNPILGVY-D-NSLHFLDFDRSESCFEKWVMKEGS 286 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~------~-~~~~~l~~~-~-g~L~l~~~~~~~~~~~iW~l~~~~ 286 (357)
+|.+|+..... ...|..||...+....+..+... . ..-..++.. + |.|+++.. ...++.+|-.+.++
T Consensus 154 ~g~lyv~d~~~--~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~--~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 154 TGAVFVSDGYC--NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR--ENGRIQCFKTDTKE 229 (329)
T ss_dssp TCCEEEEECSS--CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET--TTTEEEEEETTTCC
T ss_pred CCeEEEEeCCC--CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC--CCCEEEEEECCCCc
Confidence 68899887421 35899999777666655422211 0 001233333 4 78887776 46788888877443
Q ss_pred eEEEEEEccCCceeEEEEEee------CCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 287 WTKQLSVGPILGVLRALEFWK------NGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 287 W~~~~~i~~~~~~~~~~~~~~------~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
............-...+.+.. +|.+++... ...+..+|+.++++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 230 FVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp EEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred EEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 333222221111111222222 222222211 34788888887776554
No 122
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=51.41 E-value=96 Score=27.96 Aligned_cols=112 Identities=14% Similarity=0.194 Sum_probs=56.7
Q ss_pred cceEEC-----ceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEE-EECCeEEEEEecCC-CCeEEEEEEc
Q 037345 211 ENTYLD-----RICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNSLHFLDFDRS-ESCFEKWVMK 283 (357)
Q Consensus 211 ~~v~~~-----G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~-~~~~~iW~l~ 283 (357)
.++.++ |.|||.... ..|..+|+.+.+...+..+... . ..++ ..+|.|+++..... ...-.++...
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~----~~I~~id~~~g~v~~~~~~~~~--P-~giavd~dG~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR----DAFRHVDFVNQYVDIKTTNIGQ--C-ADVNFTLNGDMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT----SCEEEEETTTTEEEEECCCCSC--E-EEEEECTTCCEEEEECCSCTTSEEEEEECG
T ss_pred ceEEEccccCCCEEEEEeCC----CCEEEEECCCCEEEEeecCCCC--c-cEEEECCCCCEEEEcCCCCcccceEEEEEC
Confidence 456665 899998653 4899999988888766432111 1 1222 33677777664211 1222333333
Q ss_pred CCeeEEEEEEccCCceeEEEEEee-CCcEEEEee-CCeEEEEECCCCcE
Q 037345 284 EGSWTKQLSVGPILGVLRALEFWK-NGSFFIESN-TNQLLLYDPNTRAL 330 (357)
Q Consensus 284 ~~~W~~~~~i~~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~yd~~t~~~ 330 (357)
+..+.....+... ....-+++.. +|.+|+... .+++..||++++++
T Consensus 215 ~~~~~~~~~~~~~-~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 215 ASGFTERLSLCNA-RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp GGTTCCEEEEEEC-SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred CCCeecccccccc-CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 3223211111111 0112233444 566666543 45677777776665
No 123
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=50.60 E-value=1.2e+02 Score=25.81 Aligned_cols=196 Identities=9% Similarity=0.029 Sum_probs=95.6
Q ss_pred EecccceEEEeecCCCeEEEEeccc----cchhc-CCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCC
Q 037345 100 LGNCNGLFCLHDKNSNRISIWNLAT----REFRA-LPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRK 174 (357)
Q Consensus 100 ~~s~~GLll~~~~~~~~~~V~NP~T----~~~~~-LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~ 174 (357)
.+..+|.|...+....+++..++.+ ..... ++. .. .. ..++.+|...+...+.- ..
T Consensus 37 ~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~-~~---~~------p~glavd~~~~~ly~~d---~~------ 97 (316)
T 1ijq_A 37 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DI---QA------PDGLAVDWIHSNIYWTD---SV------ 97 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC--------CEEEECS-SC---SC------CCEEEEETTTTEEEEEE---TT------
T ss_pred EEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC-CC---CC------cCEEEEeecCCeEEEEE---CC------
Confidence 3445677777776666788888876 22222 221 11 11 35677776554322211 11
Q ss_pred CCcceEEEEEEcCCCceeecccCCcccccccCCCCCcceE---ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCC
Q 037345 175 DSVSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTY---LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNS 251 (357)
Q Consensus 175 ~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~ 251 (357)
....+ +++..+..=+.+... .+.. -.++. .+|.+||..... ...|..+|++...-..+-.. ..
T Consensus 98 -~~~I~--~~~~~g~~~~~~~~~---~~~~-----P~~iavdp~~g~ly~~d~~~--~~~I~~~~~dG~~~~~~~~~-~~ 163 (316)
T 1ijq_A 98 -LGTVS--VADTKGVKRKTLFRE---NGSK-----PRAIVVDPVHGFMYWTDWGT--PAKIKKGGLNGVDIYSLVTE-NI 163 (316)
T ss_dssp -TTEEE--EEETTSSSEEEEEEC---TTCC-----EEEEEEETTTTEEEEEECSS--SCEEEEEETTSCCEEEEECS-SC
T ss_pred -CCEEE--EEeCCCCceEEEEEC---CCCC-----cceEEeCCCCCEEEEEccCC--CCeEEEEcCCCCCeEEEEEC-CC
Confidence 12444 777665432222110 0110 12333 378999987542 35899999987655443211 11
Q ss_pred CCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEe-eCCcEEEEee-CCeEEEEECCC
Q 037345 252 YFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFW-KNGSFFIESN-TNQLLLYDPNT 327 (357)
Q Consensus 252 ~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~~~i~~~~~-~~~~~~yd~~t 327 (357)
. .-..|+.. +|+|+++.. ...++...-++. +-.+.. +.....+..|.++. .++.+|+... .+++..+|..+
T Consensus 164 ~-~P~gla~d~~~~~lY~~D~--~~~~I~~~d~dg-~~~~~~-~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 164 Q-WPNGITLDLLSGRLYWVDS--KLHSISSIDVNG-GNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp S-CEEEEEEETTTTEEEEEET--TTTEEEEEETTS-CSCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred C-CceEEEEeccCCEEEEEEC--CCCeEEEEecCC-CceEEE-eecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCC
Confidence 1 11134443 577887765 344554444443 111111 11111223455544 2466766654 56899999876
Q ss_pred Cc-EEEe
Q 037345 328 RA-LRDV 333 (357)
Q Consensus 328 ~~-~~~v 333 (357)
++ .+.+
T Consensus 239 g~~~~~i 245 (316)
T 1ijq_A 239 GSDVNLL 245 (316)
T ss_dssp CCCCEEE
T ss_pred CcceEEE
Confidence 65 4444
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=50.22 E-value=1.2e+02 Score=25.76 Aligned_cols=97 Identities=9% Similarity=0.061 Sum_probs=55.9
Q ss_pred CEEEEEECCCcceeEecCCCCCCCCCCeEEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEcc-CCceeEEEEEee
Q 037345 230 QEILSFHMRDEAFHVIKCPDNSYFPNPILGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGP-ILGVLRALEFWK 307 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~-~~~~~~~~~~~~ 307 (357)
..|..+|+.+.+...+......... ..+.. -+|.+.+++. .+..+.||-++...-. ...+.. ...-..-+.+..
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~i-~~~~~~pdg~~lasg~--~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~ 224 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVEY-SSGVLHKDSLLLALYS--PDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFAD 224 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCCC-CEEEECTTSCEEEEEC--TTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECT
T ss_pred CcEEEEECCCCcEEEEEecCCCCce-EEEEECCCCCEEEEEc--CCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeC
Confidence 4788899888776433221111111 12222 2566655554 4689999998872211 012222 122344556667
Q ss_pred CCcEEEEeeCCeEEEEECCCCcE
Q 037345 308 NGSFFIESNTNQLLLYDPNTRAL 330 (357)
Q Consensus 308 ~~~i~~~~~~~~~~~yd~~t~~~ 330 (357)
+|..++...++.+..||+++.+.
T Consensus 225 ~g~~l~s~~~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 225 NGYWMVVECDQTVVCFDLRKDVG 247 (343)
T ss_dssp TSSEEEEEESSBEEEEETTSSTT
T ss_pred CCCEEEEEeCCeEEEEEcCCCCc
Confidence 77777776677999999988754
No 125
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=50.03 E-value=67 Score=27.15 Aligned_cols=93 Identities=9% Similarity=-0.013 Sum_probs=52.3
Q ss_pred CEEEEEECCCcceeE-ecCCCCCCCCCCeEEEE---CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEE---ccCCceeEE
Q 037345 230 QEILSFHMRDEAFHV-IKCPDNSYFPNPILGVY---DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSV---GPILGVLRA 302 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~-i~lP~~~~~~~~~l~~~---~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i---~~~~~~~~~ 302 (357)
..|..+|+.+.+... +.. . .....-+.. +|.+.+++. .+..+.||-++..+ ....+ ........-
T Consensus 95 g~i~v~d~~~~~~~~~~~~--~--~~~i~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~--~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVG--H--GNAINELKFHPRDPNLLLSVS--KDHALRLWNIQTDT--LVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp CEEEEECTTTCCEEEEEES--C--CSCEEEEEECSSCTTEEEEEE--TTSCEEEEETTTTE--EEEEECSTTSCSSCEEE
T ss_pred CEEEEEEchhceEeeeecC--C--CCcEEEEEECCCCCCEEEEEe--CCCeEEEEEeecCe--EEEEecccccccCceeE
Confidence 478888887655432 221 1 111122222 456555555 46789999988743 22333 222223344
Q ss_pred EEEeeCCcEEEEe-eCCeEEEEECCCCcE
Q 037345 303 LEFWKNGSFFIES-NTNQLLLYDPNTRAL 330 (357)
Q Consensus 303 ~~~~~~~~i~~~~-~~~~~~~yd~~t~~~ 330 (357)
+.+..++..++.. .++.+..||+++++.
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 195 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRM 195 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHH
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCcc
Confidence 5555667666554 478999999998754
No 126
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=49.84 E-value=1.3e+02 Score=25.99 Aligned_cols=92 Identities=7% Similarity=-0.038 Sum_probs=50.0
Q ss_pred CEEEEEECCCcceeE-ecCCCCCCCCCCeEEE-ECCeEEEEEecCCCCeEEEEEEcC-C-----------------eeEE
Q 037345 230 QEILSFHMRDEAFHV-IKCPDNSYFPNPILGV-YDNSLHFLDFDRSESCFEKWVMKE-G-----------------SWTK 289 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~-~-----------------~W~~ 289 (357)
..|..+|+.+.+... +...... . ..+.. .+|++.+++. ....+.||-++. . ....
T Consensus 310 ~~i~i~d~~~~~~~~~~~~~~~~--i-~~~~~s~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (425)
T 1r5m_A 310 GSVRLWSLKQNTLLALSIVDGVP--I-FAGRISQDGQKYAVAF--MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPL 384 (425)
T ss_dssp SEEEEEETTTTEEEEEEECTTCC--E-EEEEECTTSSEEEEEE--TTSCEEEEECHHHHC--------------CEECCE
T ss_pred CcEEEEECCCCcEeEecccCCcc--E-EEEEEcCCCCEEEEEE--CCCeEEEEECCCCccceeeeecccccccCcccchh
Confidence 588999998765432 2221111 0 11222 2466555554 367899999886 2 0113
Q ss_pred EEEEccCCc--eeEEEEEeeCCcEEEE-eeCCeEEEEECC
Q 037345 290 QLSVGPILG--VLRALEFWKNGSFFIE-SNTNQLLLYDPN 326 (357)
Q Consensus 290 ~~~i~~~~~--~~~~~~~~~~~~i~~~-~~~~~~~~yd~~ 326 (357)
...+..... ...-+.+..++..++. ..++.+..||++
T Consensus 385 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 385 YASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred hhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 344433211 3444555566765544 457789999986
No 127
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=49.78 E-value=1.8e+02 Score=27.80 Aligned_cols=189 Identities=15% Similarity=0.089 Sum_probs=93.7
Q ss_pred eEEEEeccccchh--cCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCceee
Q 037345 116 RISIWNLATREFR--ALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDSWRY 193 (357)
Q Consensus 116 ~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 193 (357)
++++++.-|++.. .+-..+.. . . ...+..+.+. ++|-++...... ...++.+.+..++.|+.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~-~-~-----~~~~~~~SpD-G~~l~~~~~~~~--------~~~~l~~~~~~~~~~~~ 266 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGD-P-T-----TFLQSDLSRD-GKYLFVYILRGW--------SENDVYWKRPGEKDFRL 266 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCC-T-T-----CEEEEEECTT-SCCEEEEEEETT--------TEEEEEEECTTCSSCEE
T ss_pred EEEEEECCCCchhceEEEecCCC-C-E-----EEEEEEECCC-CCEEEEEEeCCC--------CceEEEEEcCCCCceEE
Confidence 4788888877632 22221110 0 0 1334455443 355544432210 23454466655677777
Q ss_pred cccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCcc---eeEecCCCCCCCCCCeEEEECCeEEEEEe
Q 037345 194 LKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEA---FHVIKCPDNSYFPNPILGVYDNSLHFLDF 270 (357)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~---~~~i~lP~~~~~~~~~l~~~~g~L~l~~~ 270 (357)
+..... .. ...+..+|.+|.....+.....|+.+|+++.. |..+-.+...... ..+...+|.|.+...
T Consensus 267 l~~~~~---~~-----~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l-~~~~~~~~~lv~~~~ 337 (695)
T 2bkl_A 267 LVKGVG---AK-----YEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASL-LSVSIVGGHLSLEYL 337 (695)
T ss_dssp EEECSS---CC-----EEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEE-EEEEEETTEEEEEEE
T ss_pred eecCCC---ce-----EEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeE-EEEEEECCEEEEEEE
Confidence 653221 00 22334566666665433235789999997654 6654332211000 112334777776665
Q ss_pred cCCCCeEEEEEEcC-CeeEEEEEEccC-CceeEEEEEeeCC-cEEEEee----CCeEEEEECCCCcEEEe
Q 037345 271 DRSESCFEKWVMKE-GSWTKQLSVGPI-LGVLRALEFWKNG-SFFIESN----TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 271 ~~~~~~~~iW~l~~-~~W~~~~~i~~~-~~~~~~~~~~~~~-~i~~~~~----~~~~~~yd~~t~~~~~v 333 (357)
. ....+||.++- +. ....+... ......+.+..++ .+++... ...++.||+++++.+.+
T Consensus 338 ~--dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 338 K--DATSEVRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELW 403 (695)
T ss_dssp E--TTEEEEEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred E--CCEEEEEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 3 56778888873 22 22333211 1111112222344 3544432 35799999999887666
No 128
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=49.61 E-value=59 Score=27.26 Aligned_cols=108 Identities=8% Similarity=0.065 Sum_probs=56.9
Q ss_pred Cc-eEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEE-EECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEE
Q 037345 216 DR-ICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSV 293 (357)
Q Consensus 216 ~G-~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i 293 (357)
+| .+||..... ..|..+|.. .+.+.+..|.... ..+. ..+|+|.+... ....+.++-.+ ++.......
T Consensus 55 ~g~~l~~~d~~~---~~i~~~~~~-g~~~~~~~~~~~~---~gl~~d~dG~l~v~~~--~~~~v~~~~~~-g~~~~~~~~ 124 (305)
T 3dr2_A 55 AQRTLVWSDLVG---RRVLGWRED-GTVDVLLDATAFT---NGNAVDAQQRLVHCEH--GRRAITRSDAD-GQAHLLVGR 124 (305)
T ss_dssp GGTEEEEEETTT---TEEEEEETT-SCEEEEEESCSCE---EEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECE
T ss_pred CCCEEEEEECCC---CEEEEEeCC-CCEEEEeCCCCcc---ceeeECCCCCEEEEEC--CCCEEEEECCC-CCEEEEEec
Confidence 45 488887543 578889985 4455555443321 1222 23677765543 23444444333 332222111
Q ss_pred ccCCce--eEEEEEeeCCcEEEEe------------------eCCeEEEEECCCCcEEEe
Q 037345 294 GPILGV--LRALEFWKNGSFFIES------------------NTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 294 ~~~~~~--~~~~~~~~~~~i~~~~------------------~~~~~~~yd~~t~~~~~v 333 (357)
...... ..-+.+..+|.+++.. ....++.||+++++++.+
T Consensus 125 ~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~ 184 (305)
T 3dr2_A 125 YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM 184 (305)
T ss_dssp ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE
T ss_pred cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE
Confidence 111011 1235555678888842 125799999988888765
No 129
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=49.27 E-value=1.2e+02 Score=25.62 Aligned_cols=96 Identities=9% Similarity=0.148 Sum_probs=58.0
Q ss_pred CEEEEEECCCcceeEec-CCCCCCCCCCeEEEE--C--CeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEE
Q 037345 230 QEILSFHMRDEAFHVIK-CPDNSYFPNPILGVY--D--NSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALE 304 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~-lP~~~~~~~~~l~~~--~--g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~ 304 (357)
..|..+|+.++....+. +... .....-+.. + |.+.+.+. .+..+.||-++...|.....+........-+.
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 108 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQ 108 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CcEEEEecCCCcceeeeEecCC--CCcEEEEEeCCCCCCCEEEEec--cCCEEEEEEcCCCceeEeeeecCCCcceEEEE
Confidence 36777777655554432 2211 111222222 2 66555555 46789999999988877777754333345555
Q ss_pred EeeC--CcEEEE-eeCCeEEEEECCCCc
Q 037345 305 FWKN--GSFFIE-SNTNQLLLYDPNTRA 329 (357)
Q Consensus 305 ~~~~--~~i~~~-~~~~~~~~yd~~t~~ 329 (357)
+..+ +..++. ..++.+..||++++.
T Consensus 109 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 109 WAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp ECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred eCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 5555 555554 458899999999873
No 130
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=49.19 E-value=3.9 Score=36.34 Aligned_cols=29 Identities=10% Similarity=0.082 Sum_probs=18.5
Q ss_pred CcceEECceEEEEEccCCCcCEEEEEECCCcce
Q 037345 210 SENTYLDRICYWIAWRYNNCQEILSFHMRDEAF 242 (357)
Q Consensus 210 ~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~ 242 (357)
+.++..+|.+|.-...+ .|.++|..+.+.
T Consensus 3 ssP~v~~~~v~~gs~dg----~v~a~d~~tG~~ 31 (369)
T 2hz6_A 3 STVTLPETLLFVSTLDG----SLHAVSKRTGSI 31 (369)
T ss_dssp -----CTTEEEEEETTS----EEEEEETTTCCE
T ss_pred CCCeeeCCEEEEEcCCC----EEEEEECCCCCE
Confidence 45667888998877655 899999876543
No 131
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=48.77 E-value=1.2e+02 Score=25.38 Aligned_cols=109 Identities=9% Similarity=0.001 Sum_probs=58.1
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCccee-EecCCCCCCCCCCeEEE-ECCe-EEEEEecCCCCeEEEEEEcCCeeEEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFH-VIKCPDNSYFPNPILGV-YDNS-LHFLDFDRSESCFEKWVMKEGSWTKQL 291 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~-~i~lP~~~~~~~~~l~~-~~g~-L~l~~~~~~~~~~~iW~l~~~~W~~~~ 291 (357)
.+|.+|..... ...|..+|+.+.+.. .++.+.... . ..+.. .+|+ +++... ....+.+|-++..+-....
T Consensus 9 ~~~~~~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~-~-~~~~~s~dg~~~~v~~~--~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 9 AGHEYMIVTNY---PNNLHVVDVASDTVYKSCVMPDKFG-P-GTAMMAPDNRTAYVLNN--HYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp TTCEEEEEEET---TTEEEEEETTTTEEEEEEECSSCCS-S-CEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCC---CCeEEEEECCCCcEEEEEecCCCCC-C-ceeEECCCCCEEEEEeC--CCCcEEEEeCCCCcEEEEE
Confidence 45566555443 358999999887663 456654211 1 12333 3566 444442 4567777776654333222
Q ss_pred EEccC----CceeEEEEEeeCCcEEEE-ee------------CCeEEEEECCCCcE
Q 037345 292 SVGPI----LGVLRALEFWKNGSFFIE-SN------------TNQLLLYDPNTRAL 330 (357)
Q Consensus 292 ~i~~~----~~~~~~~~~~~~~~i~~~-~~------------~~~~~~yd~~t~~~ 330 (357)
..... ......+.+..+|+.++. .. ...+..||+++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc
Confidence 22211 001233455566665444 32 37899999988543
No 132
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=48.14 E-value=1.2e+02 Score=25.40 Aligned_cols=63 Identities=13% Similarity=0.156 Sum_probs=37.7
Q ss_pred CeEEEEEecCCCCeEEEEEEcC-C-eeEEEEEEccC--CceeEEEEEeeCCcEEEEe-eCCeEEEEECCC
Q 037345 263 NSLHFLDFDRSESCFEKWVMKE-G-SWTKQLSVGPI--LGVLRALEFWKNGSFFIES-NTNQLLLYDPNT 327 (357)
Q Consensus 263 g~L~l~~~~~~~~~~~iW~l~~-~-~W~~~~~i~~~--~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t 327 (357)
|++.+++. ....+.||-++. . .-.....+... .....-+.+..++..++.. .++.+..||+.+
T Consensus 299 ~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGN--QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEEC--TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEe--cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 66555554 467899999987 2 11233344332 2334455666677766654 478999999864
No 133
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=48.09 E-value=1.2e+02 Score=25.23 Aligned_cols=93 Identities=8% Similarity=0.096 Sum_probs=46.1
Q ss_pred CEEEEEECCCcceeE-ecCCCCCCCCCCeEEEE-CCeEEEEEecCCCCeEEEEEEcCCeeEEEEE-------EccCCcee
Q 037345 230 QEILSFHMRDEAFHV-IKCPDNSYFPNPILGVY-DNSLHFLDFDRSESCFEKWVMKEGSWTKQLS-------VGPILGVL 300 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~-i~lP~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~-------i~~~~~~~ 300 (357)
..|..+|+.+.+-.. +...... ..+... ++.+. +.. .+..+.||-++...-..... ........
T Consensus 237 g~i~iwd~~~~~~~~~~~~~~~v----~~~~~~~~~~~~-~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYTLDGGDII----NALCFSPNRYWL-CAA--TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQC 309 (340)
T ss_dssp CEEEEEETTTTEEEEEEECSSCE----EEEEECSSSSEE-EEE--ETTEEEEEETTTTEEEEEECCC-------CCCCCE
T ss_pred CeEEEEEeccCceeeeecCCceE----EeeecCCCCcee-ecc--CCCEEEEEECCCCeEEEeccccceeeeccCCCCCE
Confidence 477788887765422 2221111 112222 33333 333 25788999877621111110 00011123
Q ss_pred EEEEEeeCCcEEEEe-eCCeEEEEECCCCc
Q 037345 301 RALEFWKNGSFFIES-NTNQLLLYDPNTRA 329 (357)
Q Consensus 301 ~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~ 329 (357)
.-+.+..+|..++.. .|+.+..||++|++
T Consensus 310 ~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 310 TSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 345556677776654 47889999999875
No 134
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=47.87 E-value=2e+02 Score=27.89 Aligned_cols=107 Identities=11% Similarity=-0.048 Sum_probs=53.1
Q ss_pred ceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCC-CeEEEE-CCeEEEEEecCCCCeEEEEEEcC--CeeEEEEE
Q 037345 217 RICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPN-PILGVY-DNSLHFLDFDRSESCFEKWVMKE--GSWTKQLS 292 (357)
Q Consensus 217 G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~-~~l~~~-~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~ 292 (357)
|.++ +.... ..|..||..+.++..+..|....... ..+... +|.|.+.+. .. .|..++. +.+.....
T Consensus 374 g~lW-igt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~---~~--Gl~~~~~~~~~~~~~~~ 444 (781)
T 3v9f_A 374 GKLW-IGTDG---GGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTY---LG--NISYYNTRLKKFQIIEL 444 (781)
T ss_dssp SCEE-EEEBS---SCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEET---TE--EEEEECSSSCEEEECCS
T ss_pred CCEE-EEeCC---CcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEec---cC--CEEEEcCCCCcEEEecc
Confidence 5554 44321 26899999988887653222221111 122332 577776543 12 2444544 43332110
Q ss_pred EccCCceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcEEEe
Q 037345 293 VGPILGVLRALEFWKNGSFFIESNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 293 i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v 333 (357)
..........+....+|.+++... ..++.||+++++++.+
T Consensus 445 ~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 445 EKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHH 484 (781)
T ss_dssp TTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEE
T ss_pred CCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEec
Confidence 000111122333334566776654 7899999999888665
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=47.72 E-value=1.5e+02 Score=26.22 Aligned_cols=184 Identities=7% Similarity=0.030 Sum_probs=90.3
Q ss_pred CeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCCceeec
Q 037345 115 NRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTDSWRYL 194 (357)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 194 (357)
.++.++|..+++...|..... . ...+.+.|.. ++ ++.... ..+ ... +++++..+++-+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~----~------v~~~~~Spdg-~~-la~~s~-~~~-----~~~--i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ----P------LMSPAWSPDG-SK-LAYVTF-ESG-----RSA--LVIQTLANGAVRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS----C------EEEEEECTTS-SE-EEEEEC-TTS-----SCE--EEEEETTTCCEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCC----c------ceeeEEcCCC-CE-EEEEEe-cCC-----CcE--EEEEECCCCcEEEe
Confidence 478999987665554433211 1 3445555543 22 222221 111 124 44999988876654
Q ss_pred ccCCcccccccCCCCCcceEECce-EEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEE-EECCeEEEEEecC
Q 037345 195 KANELSDYSFLGGQQSENTYLDRI-CYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNSLHFLDFDR 272 (357)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~ 272 (357)
..... ... .....-+|. +.+....+ +...|..+|+.+.+...+.. .. .....+. .-+|+..++...
T Consensus 219 ~~~~~-~~~------~~~~spdg~~la~~~~~~-g~~~i~~~d~~~~~~~~l~~--~~-~~~~~~~~spdg~~l~~~s~- 286 (415)
T 2hqs_A 219 ASFPR-HNG------APAFSPDGSKLAFALSKT-GSLNLYVMDLASGQIRQVTD--GR-SNNTEPTWFPDSQNLAFTSD- 286 (415)
T ss_dssp ECCSS-CEE------EEEECTTSSEEEEEECTT-SSCEEEEEETTTCCEEECCC--CS-SCEEEEEECTTSSEEEEEEC-
T ss_pred ecCCC-ccc------CEEEcCCCCEEEEEEecC-CCceEEEEECCCCCEEeCcC--CC-CcccceEECCCCCEEEEEEC-
Confidence 43211 000 111222564 44444322 24579999999877654322 11 1101222 226764333332
Q ss_pred CCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEE-EeeC---CeEEEEECCCCcEEEe
Q 037345 273 SESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFI-ESNT---NQLLLYDPNTRALRDV 333 (357)
Q Consensus 273 ~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~-~~~~---~~~~~yd~~t~~~~~v 333 (357)
......||.++- +. ...+........-..+..+|+.++ ...+ ..+..+|+++++.+.+
T Consensus 287 ~~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 287 QAGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp TTSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred CCCCcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 234456676664 22 112221112223345556776544 3332 4799999999998776
No 136
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=47.07 E-value=1.3e+02 Score=25.36 Aligned_cols=68 Identities=9% Similarity=0.024 Sum_probs=40.1
Q ss_pred CeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEe-eCCeEEEEECCCCcEEE
Q 037345 263 NSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIES-NTNQLLLYDPNTRALRD 332 (357)
Q Consensus 263 g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~ 332 (357)
+.+.+.+. .+..+.||-+++........+.....-..-+.+..++.++... .++.+..||+++++..+
T Consensus 48 ~~~l~tgs--~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~ 116 (321)
T 3ow8_A 48 SETVVTGS--LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIK 116 (321)
T ss_dssp -CEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCEEEEEc--CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEE
Confidence 44444444 4678999998875444444443222223334445556665543 47889999998876543
No 137
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=46.70 E-value=1.2e+02 Score=24.88 Aligned_cols=27 Identities=11% Similarity=0.417 Sum_probs=19.2
Q ss_pred cccceEEEeecCCCeEEEEeccccchhcC
Q 037345 102 NCNGLFCLHDKNSNRISIWNLATREFRAL 130 (357)
Q Consensus 102 s~~GLll~~~~~~~~~~V~NP~T~~~~~L 130 (357)
|.+|+|.+.. + ..+.|||..|++...+
T Consensus 34 S~~~~lAvg~-D-~tV~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 34 SSGNVLAVAL-D-NSVYLWSASSGDILQL 60 (318)
T ss_dssp CTTSEEEEEE-T-TEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEe-C-CEEEEEECCCCCEEEE
Confidence 5677665544 3 3689999999987654
No 138
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=46.52 E-value=2.1e+02 Score=27.74 Aligned_cols=198 Identities=10% Similarity=0.074 Sum_probs=97.9
Q ss_pred ccceEEEeecCCCeEEEEeccccchhcCCCCCC----CCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcc
Q 037345 103 CNGLFCLHDKNSNRISIWNLATREFRALPKWKG----EIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVS 178 (357)
Q Consensus 103 ~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~----~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~ 178 (357)
.+|-|-+..... .+..++|.++....+...+. ..... .....+..|.... +.+..... .
T Consensus 322 ~~g~lWigt~~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~v~~i~~d~~g~----lWigt~~~--------G 384 (781)
T 3v9f_A 322 SFNNIWIGTWGG-GINFISNAPPTFHTWSYSPTQMNESSLSN----KVVSSVCDDGQGK----LWIGTDGG--------G 384 (781)
T ss_dssp SSCCEEEEEBSS-CEEEECSSCCSCEEEC----CCCSSCCSS----SCEEEEEECTTSC----EEEEEBSS--------C
T ss_pred CCCCEEEEecCC-eEEEeCCCCCcceeeccCccccccCCCCC----cceEEEEEcCCCC----EEEEeCCC--------c
Confidence 456665555332 46888888877666543211 11111 1134455554321 33332222 2
Q ss_pred eEEEEEEcCCCceeecccCCcccccccCCCCCcceEE--CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCC-
Q 037345 179 TEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL--DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPN- 255 (357)
Q Consensus 179 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~- 255 (357)
+..|+..++.++.... +. .++. ....+++. +|.+ |+.... ..+..||..++++..+..+ ......
T Consensus 385 --l~~~~~~~~~~~~~~~-~~-~~~~---~~v~~i~~d~~g~l-Wigt~~---~Gl~~~~~~~~~~~~~~~~-~~~~~~v 452 (781)
T 3v9f_A 385 --INVFENGKRVAIYNKE-NR-ELLS---NSVLCSLKDSEGNL-WFGTYL---GNISYYNTRLKKFQIIELE-KNELLDV 452 (781)
T ss_dssp --EEEEETTEEEEECC-------CCC---SBEEEEEECTTSCE-EEEETT---EEEEEECSSSCEEEECCST-TTCCCCE
T ss_pred --EEEEECCCCeEEEccC-CC-CCCC---cceEEEEECCCCCE-EEEecc---CCEEEEcCCCCcEEEeccC-CCCCCeE
Confidence 3377777666654421 10 1110 00223333 4555 444321 3799999999999877654 111111
Q ss_pred CeEEEE-CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccC---CceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcEE
Q 037345 256 PILGVY-DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPI---LGVLRALEFWKNGSFFIESNTNQLLLYDPNTRALR 331 (357)
Q Consensus 256 ~~l~~~-~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~ 331 (357)
..+.+. +|.|.+.+. ..+.++-.+...|......... .....-+....+|.+++-..+..++.||+++++++
T Consensus 453 ~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~ 528 (781)
T 3v9f_A 453 RVFYEDKNKKIWIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVR 528 (781)
T ss_dssp EEEEECTTSEEEEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEE
T ss_pred EEEEECCCCCEEEEEC----CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEE
Confidence 223333 577777553 2333333233556554332210 11223334445677888776677999999999988
Q ss_pred Ee
Q 037345 332 DV 333 (357)
Q Consensus 332 ~v 333 (357)
.+
T Consensus 529 ~~ 530 (781)
T 3v9f_A 529 KF 530 (781)
T ss_dssp EE
T ss_pred Ec
Confidence 77
No 139
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=46.16 E-value=1.3e+02 Score=24.95 Aligned_cols=64 Identities=6% Similarity=0.167 Sum_probs=39.5
Q ss_pred CeEEEEEecCCCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCC---cEEEE-eeCCeEEEEECCCC
Q 037345 263 NSLHFLDFDRSESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNG---SFFIE-SNTNQLLLYDPNTR 328 (357)
Q Consensus 263 g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~---~i~~~-~~~~~~~~yd~~t~ 328 (357)
+++.+.+. .+..+.||-++. ..|.....+........-+.+..++ ..+.. ..|+.+..||+++.
T Consensus 170 ~~~l~sgs--~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 170 SRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cceEEEEc--CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 34444444 467899999987 5677766665333334445555543 44443 34788999998764
No 140
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=46.09 E-value=2.3e+02 Score=27.96 Aligned_cols=52 Identities=17% Similarity=0.294 Sum_probs=33.2
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEe-cCCCCCCCCCCeEEEECCeEEEEEe
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVI-KCPDNSYFPNPILGVYDNSLHFLDF 270 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~l~~~ 270 (357)
.+|.|||.... ...|.++|++...-..+ ..+.... .-..|...+++|+++..
T Consensus 568 ~~~~LYwaD~~---~~~I~~~d~dG~~~~~v~~~~~~l~-~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 568 LSGRLYWVDSK---LHSISSIDVNGGNRKTILEDEKRLA-HPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp TTTEEEEEETT---TTEEEEEETTSCSCEEEEECTTTTS-SEEEEEEETTEEEEEET
T ss_pred CCCeEEEEeCC---CCcEEEEecCCCceEEEecCCCccC-CCCEEEEeCCEEEEEEC
Confidence 35899999754 36899999987655444 2221111 11356677888888765
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=45.61 E-value=1.9e+02 Score=26.84 Aligned_cols=114 Identities=6% Similarity=0.020 Sum_probs=66.5
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeE-ecCCCCCC-CCCCeEEEEC-CeEEEEEecCCCCeEEEEEEcC-----Ce
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHV-IKCPDNSY-FPNPILGVYD-NSLHFLDFDRSESCFEKWVMKE-----GS 286 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~-i~lP~~~~-~~~~~l~~~~-g~L~l~~~~~~~~~~~iW~l~~-----~~ 286 (357)
-+|...+.+... ...|..+|+.+.+... ++.....+ .....+..-+ |.+++.... ...++.||-.+. ..
T Consensus 333 pdg~~l~va~~~--~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~-~d~~V~v~d~~~~~~~~~~ 409 (543)
T 1nir_A 333 SSHRYFMTAANN--SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHL-GDGSISLIGTDPKNHPQYA 409 (543)
T ss_dssp TTSCEEEEEEGG--GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBS-SSSEEEEEECCTTTCTTTB
T ss_pred CCCCEEEEEecC--CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccC-CCceEEEEEeCCCCCchhc
Confidence 356644444322 3478889999887643 44321111 1112222233 556554432 457899999886 24
Q ss_pred eEEEEEEccCCceeEEEEEeeCCcEEEEee--------CCeEEEEECCCCcEE
Q 037345 287 WTKQLSVGPILGVLRALEFWKNGSFFIESN--------TNQLLLYDPNTRALR 331 (357)
Q Consensus 287 W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~yd~~t~~~~ 331 (357)
|..+.++.....-...+.+..++..+.... +..+..||.+|.+..
T Consensus 410 ~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 410 WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 988888864322223355566777666543 458999999988764
No 142
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=45.54 E-value=1.6e+02 Score=25.97 Aligned_cols=111 Identities=10% Similarity=0.130 Sum_probs=60.2
Q ss_pred ceEECceEEEEEccCCCcCEEEEEECCCcce-eEecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEE
Q 037345 212 NTYLDRICYWIAWRYNNCQEILSFHMRDEAF-HVIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQ 290 (357)
Q Consensus 212 ~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~ 290 (357)
++..+|........ ...|..+|+.+.+. ..+..+... .....-+..+|.+.+++. .+..+.||-++.++-...
T Consensus 324 ~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~ 397 (445)
T 2ovr_B 324 GMELKDNILVSGNA---DSTVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFNKNFVITSS--DDGTVKLWDLKTGEFIRN 397 (445)
T ss_dssp EEEEETTEEEEEET---TSCEEEEETTTCCEEEEECSTTSC-SSCEEEEEECSSEEEEEE--TTSEEEEEETTTCCEEEE
T ss_pred EEEEeCCEEEEEeC---CCeEEEEECCCCcEEEEEccCCCC-CCCEEEEEECCCEEEEEe--CCCeEEEEECCCCceeee
Confidence 34455554444332 24788999976554 344443322 122333445677555554 468999999887543433
Q ss_pred EEEc---cCCceeEEEEEeeCCcEEEEee-CC----eEEEEECCCC
Q 037345 291 LSVG---PILGVLRALEFWKNGSFFIESN-TN----QLLLYDPNTR 328 (357)
Q Consensus 291 ~~i~---~~~~~~~~~~~~~~~~i~~~~~-~~----~~~~yd~~t~ 328 (357)
.... .......-+.+..++.++.... ++ .+..||++..
T Consensus 398 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 398 LVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 3211 1122334455555666655543 44 4899998754
No 143
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=45.37 E-value=1.3e+02 Score=25.06 Aligned_cols=95 Identities=7% Similarity=0.071 Sum_probs=50.5
Q ss_pred CEEEEEECCCcc--eeEecCCCCCCCCCCeEEE------ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeE
Q 037345 230 QEILSFHMRDEA--FHVIKCPDNSYFPNPILGV------YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLR 301 (357)
Q Consensus 230 ~~i~~fD~~~e~--~~~i~lP~~~~~~~~~l~~------~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~ 301 (357)
..|..+|+.+.. ...+............-+. .+|.+.+++. ....+.+|-++...= ....... ....
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~--~~~~~~~-~~v~ 213 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY--DNGDIKLFDLRNMAL--RWETNIK-NGVC 213 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE--TTSEEEEEETTTTEE--EEEEECS-SCEE
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc--cCCeEEEEECccCce--eeecCCC-CceE
Confidence 478889988765 4444443322111111122 3666655555 467899999887321 1122221 2233
Q ss_pred EEEEee---CCcEEEE-eeCCeEEEEECCCCc
Q 037345 302 ALEFWK---NGSFFIE-SNTNQLLLYDPNTRA 329 (357)
Q Consensus 302 ~~~~~~---~~~i~~~-~~~~~~~~yd~~t~~ 329 (357)
-+.+.. ++..++. ..++.+..||+++++
T Consensus 214 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 214 SLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred EEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 444444 5555444 447788888887644
No 144
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=45.29 E-value=1.3e+02 Score=25.05 Aligned_cols=195 Identities=10% Similarity=0.005 Sum_probs=93.5
Q ss_pred ccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEE
Q 037345 103 CNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVI 182 (357)
Q Consensus 103 ~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 182 (357)
.+|-|.+.+....+++++||.++....++... . ..++.+++..+ ..| + ..... ...+.
T Consensus 41 ~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~-----~------p~gia~~~dG~-l~v-a--d~~~~-------~~~v~ 98 (306)
T 2p4o_A 41 PDGTIFVTNHEVGEIVSITPDGNQQIHATVEG-----K------VSGLAFTSNGD-LVA-T--GWNAD-------SIPVV 98 (306)
T ss_dssp TTSCEEEEETTTTEEEEECTTCCEEEEEECSS-----E------EEEEEECTTSC-EEE-E--EECTT-------SCEEE
T ss_pred CCCCEEEEeCCCCeEEEECCCCceEEEEeCCC-----C------ceeEEEcCCCc-EEE-E--eccCC-------cceEE
Confidence 46777776655557889999876433332211 1 45677776543 322 1 11111 11222
Q ss_pred EEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCcceeEe---c-----CCCCCCCC
Q 037345 183 LHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAFHVI---K-----CPDNSYFP 254 (357)
Q Consensus 183 vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i---~-----lP~~~~~~ 254 (357)
.|+..+++.+.+...+...++. ...+..+|.+|..... ...|..+|..+...+.. . .+.. ...
T Consensus 99 ~~d~~~g~~~~~~~~~~~~~~~-----g~~~~~~~~~~v~d~~---~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~-~~~ 169 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDAIFLN-----GITPLSDTQYLTADSY---RGAIWLIDVVQPSGSIWLEHPMLARSNSES-VFP 169 (306)
T ss_dssp EEECTTSCEEEEEECTTCSCEE-----EEEESSSSEEEEEETT---TTEEEEEETTTTEEEEEEECGGGSCSSTTC-CSC
T ss_pred EEcCCCCeEEEEEeCCCccccC-----cccccCCCcEEEEECC---CCeEEEEeCCCCcEeEEEECCccccccccC-CCC
Confidence 6666777765543322101110 1122334556654432 34899999886432221 1 1111 001
Q ss_pred C-CeEEEECC-eEEEEEecCCCCeEEEEEEcC-CeeEEEEEEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCCcE
Q 037345 255 N-PILGVYDN-SLHFLDFDRSESCFEKWVMKE-GSWTKQLSVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTRAL 330 (357)
Q Consensus 255 ~-~~l~~~~g-~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~ 330 (357)
. -.+ ..+| .|+++.. ...++.++-++. ..-.....+... ....-+++..+|.+|+... .+++..||++ +++
T Consensus 170 ~pngi-s~dg~~lyv~d~--~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 170 AANGL-KRFGNFLYVSNT--EKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp SEEEE-EEETTEEEEEET--TTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred cCCCc-CcCCCEEEEEeC--CCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 1 123 3344 5777665 345665555543 211111111100 1123456666788877654 5689999997 444
Q ss_pred EEe
Q 037345 331 RDV 333 (357)
Q Consensus 331 ~~v 333 (357)
..+
T Consensus 245 ~~~ 247 (306)
T 2p4o_A 245 TII 247 (306)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=45.25 E-value=1.2e+02 Score=24.37 Aligned_cols=138 Identities=9% Similarity=-0.009 Sum_probs=66.9
Q ss_pred EEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCC-cceeEecCCCCCCCCCCeEE
Q 037345 181 VILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRD-EAFHVIKCPDNSYFPNPILG 259 (357)
Q Consensus 181 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~-e~~~~i~lP~~~~~~~~~l~ 259 (357)
+++++..++.-+.+..... ... .....-+|........ ..|..+|+.+ .+...+..............
T Consensus 24 i~~~d~~~~~~~~~~~~~~-~v~------~~~~spdg~~l~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 24 IEIFNIRTRKMRVVWQTPE-LFE------APNWSPDGKYLLLNSE----GLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp EEEEETTTTEEEEEEEESS-CCE------EEEECTTSSEEEEEET----TEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred EEEEeCCCCceeeeccCCc-ceE------eeEECCCCCEEEEEcC----CeEEEEeCCCCCCceEeccccccccccceEE
Confidence 4478877776654332111 010 1111224543333333 3889999988 76654432111111111122
Q ss_pred EECCeEEEEEecCCCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEE-Ee-eCC--eEEEEECCCCcEEEe
Q 037345 260 VYDNSLHFLDFDRSESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFI-ES-NTN--QLLLYDPNTRALRDV 333 (357)
Q Consensus 260 ~~~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~-~~-~~~--~~~~yd~~t~~~~~v 333 (357)
.-+|+..++..........||.++. .. ...+..... ..-+.+..+|..++ .. .++ .++.+|+++++.+.+
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~-~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGT---PRLMTKNLP-SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCC---CEECCSSSS-EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCc---eEEeecCCC-ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc
Confidence 3367655555432345678888875 22 122222222 23334555666443 33 345 566777888887776
No 146
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=45.15 E-value=1.4e+02 Score=25.08 Aligned_cols=69 Identities=12% Similarity=0.149 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCeEEEEEEcC---CeeEEEEEEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCCcEEE
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKE---GSWTKQLSVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTRALRD 332 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~---~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~ 332 (357)
++.+.+.+. .+..+.+|-+.. ..-.....+........-+.+..++..++... |+.+..||+++++...
T Consensus 29 ~~~~l~s~s--~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~ 101 (319)
T 3frx_A 29 QPNLLLSAS--RDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ 101 (319)
T ss_dssp CTTEEEEEE--TTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CccEEEEec--CCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeE
No 147
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=44.04 E-value=1.6e+02 Score=25.56 Aligned_cols=100 Identities=9% Similarity=0.052 Sum_probs=56.7
Q ss_pred CEEEEEECCCccee-EecCCCCCCCCCCeEE-EECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEee
Q 037345 230 QEILSFHMRDEAFH-VIKCPDNSYFPNPILG-VYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWK 307 (357)
Q Consensus 230 ~~i~~fD~~~e~~~-~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 307 (357)
..|..+|+.+.+.. .+..+... ..+. ..+|+..++........+.||-++.....+...+........-+.+..
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~~v----~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 359 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGSQV----TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSP 359 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSSCE----EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECT
T ss_pred CEEEEEECCCCCEEEEEeCCCcE----EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECC
Confidence 47888888766543 23322111 1222 225665555432256899999999866666666543333334456666
Q ss_pred CCcEEEEe-eCCeEEEEECCCCcEEEe
Q 037345 308 NGSFFIES-NTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 308 ~~~i~~~~-~~~~~~~yd~~t~~~~~v 333 (357)
++..++.. .++.+..||+.+++..+.
T Consensus 360 dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 360 DGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp TSSEEEEECTTSEEEEEECCC------
T ss_pred CCCEEEEEeCCCcEEEEECCCCccccc
Confidence 77766654 478899999998876443
No 148
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=43.76 E-value=1.4e+02 Score=24.71 Aligned_cols=98 Identities=9% Similarity=0.057 Sum_probs=50.4
Q ss_pred CEEEEEECCCcceeEecCCCCCCCCCCeEE--EECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccC-Cce--eEEEE
Q 037345 230 QEILSFHMRDEAFHVIKCPDNSYFPNPILG--VYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPI-LGV--LRALE 304 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~--~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~-~~~--~~~~~ 304 (357)
..|..+|+.+.+....-.... ......+ ..+|+..+++. ....+.||-+....-. ..+... ... .....
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDDD--NPPVSFVKFSPNGKYILAAT--LDNTLKLWDYSKGKCL--KTYTGHKNEKYCIFANF 244 (312)
T ss_dssp SCEEEEETTTCCEEEEECCSS--CCCEEEEEECTTSSEEEEEE--TTTEEEEEETTTTEEE--EEECSSCCSSSCCCEEE
T ss_pred CcEEEEECCCCceeeEEeccC--CCceEEEEECCCCCEEEEEc--CCCeEEEEECCCCcEE--EEEEecCCceEEEEEEE
Confidence 478889988765432211111 1111222 22566554444 4678999988773222 222211 111 11111
Q ss_pred EeeCCcEEEE-eeCCeEEEEECCCCcEEEe
Q 037345 305 FWKNGSFFIE-SNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 305 ~~~~~~i~~~-~~~~~~~~yd~~t~~~~~v 333 (357)
...++..++. ..++.+..||+++++..+.
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 274 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 274 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTTCCEEEE
T ss_pred EeCCCcEEEEECCCCEEEEEECCCchhhhh
Confidence 2234555554 3478899999999876543
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=43.57 E-value=1.4e+02 Score=24.76 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=62.9
Q ss_pred Cce-EEEEEccCCCcCEEEEEECC--Cccee---Eec-CCCCCCC-CCC-eEEE-ECCe-EEEEEecCCCCeEEEEEEcC
Q 037345 216 DRI-CYWIAWRYNNCQEILSFHMR--DEAFH---VIK-CPDNSYF-PNP-ILGV-YDNS-LHFLDFDRSESCFEKWVMKE 284 (357)
Q Consensus 216 ~G~-lyw~~~~~~~~~~i~~fD~~--~e~~~---~i~-lP~~~~~-~~~-~l~~-~~g~-L~l~~~~~~~~~~~iW~l~~ 284 (357)
+|. +|..... ...|..+|+. +.++. .+. +|..... ... .+.. -+|+ |++... ....+.+|-++.
T Consensus 188 dg~~l~~~~~~---~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~--~~~~i~v~d~~~ 262 (343)
T 1ri6_A 188 NEQYAYCVNEL---NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR--TASLITVFSVSE 262 (343)
T ss_dssp TSSEEEEEETT---TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET--TTTEEEEEEECT
T ss_pred CCCEEEEEeCC---CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec--CCCEEEEEEEcC
Confidence 554 5544422 2478888884 34443 232 4433211 111 2332 2465 444332 467899999985
Q ss_pred --CeeEEEEEEccCCceeEEEEEeeCCcEEEEee--CCeEEEE--ECCCCcEEEe
Q 037345 285 --GSWTKQLSVGPILGVLRALEFWKNGSFFIESN--TNQLLLY--DPNTRALRDV 333 (357)
Q Consensus 285 --~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~y--d~~t~~~~~v 333 (357)
+.......+..... ..-+.+..+|..++... ++.+..| |.++++++.+
T Consensus 263 ~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 263 DGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEK 316 (343)
T ss_dssp TSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEE
T ss_pred CCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEc
Confidence 56666666654322 34456666777555443 5667777 7788888877
No 150
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=43.15 E-value=1.4e+02 Score=24.76 Aligned_cols=102 Identities=10% Similarity=0.135 Sum_probs=55.7
Q ss_pred CEEEEEECCCcceeEecCCCCCCCCCCeEE-EECCe-EEEEEecC---CCCeEEEEEEcCCeeEEEEEE-ccCCceeEEE
Q 037345 230 QEILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNS-LHFLDFDR---SESCFEKWVMKEGSWTKQLSV-GPILGVLRAL 303 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~-L~l~~~~~---~~~~~~iW~l~~~~W~~~~~i-~~~~~~~~~~ 303 (357)
..|..+|..+.++..+. .... . ..+. .-+|+ |+++.... ....+.++-++.........+ ........-+
T Consensus 169 ~~v~~~d~~~g~~~~~~-~~~~--p-~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi 244 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-DLDH--P-NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGF 244 (305)
T ss_dssp EEEEEECSSSCCCEEEE-EESS--E-EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSE
T ss_pred CeEEEEcCCCCcEEEEe-cCCC--C-cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeE
Confidence 57999999888777654 1111 1 1223 23565 66554421 024555555554332222222 1111222334
Q ss_pred EEeeCCcEEEEeeCCeEEEEECCCCcEEEeeec
Q 037345 304 EFWKNGSFFIESNTNQLLLYDPNTRALRDVGLG 336 (357)
Q Consensus 304 ~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v~~~ 336 (357)
.+..+|.+++.. ...+..||++.+.+.++..+
T Consensus 245 ~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 245 CVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp EECTTSCEEECC-SSEEEEECTTSCEEEEEECS
T ss_pred EECCCCCEEEec-CCcEEEECCCCCEEEEEECC
Confidence 555678877655 56799999998888888665
No 151
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=43.12 E-value=1.4e+02 Score=24.76 Aligned_cols=71 Identities=11% Similarity=0.061 Sum_probs=43.6
Q ss_pred CCeEEEEEecCCCCeEEEEEEcC-CeeE-EEEEEccCCceeEEEEEeeCCc-EEEE-eeCCeEEEEEC-CCCcEEEeee
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKE-GSWT-KQLSVGPILGVLRALEFWKNGS-FFIE-SNTNQLLLYDP-NTRALRDVGL 335 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~-~~W~-~~~~i~~~~~~~~~~~~~~~~~-i~~~-~~~~~~~~yd~-~t~~~~~v~~ 335 (357)
+|.+.+++. ....+.||-++. ..-. ........ ....-+.+..++. .++. ..++.+..||+ ++++...+.-
T Consensus 22 ~~~~l~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 22 SKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYK-HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp GGTEEEEEE--TTSEEEEEEEETTTTEEEEEEEEECS-SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS
T ss_pred CCCEEEEEc--CCCeEEEEEeCCCCccccceeeeecC-CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc
Confidence 566555544 468999999988 3111 22222222 2234455556677 5554 45889999999 9998877643
No 152
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=42.49 E-value=1.5e+02 Score=24.91 Aligned_cols=197 Identities=12% Similarity=0.048 Sum_probs=91.4
Q ss_pred ccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEE
Q 037345 103 CNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVI 182 (357)
Q Consensus 103 ~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 182 (357)
.+|-+++.......+.|||..++++..+-.... .. . ....+.+.+. +++-+.+ ..++ . ++
T Consensus 18 ~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~-~-----~v~~~~~~~~-~~~l~~~---~~dg-------~--i~ 77 (372)
T 1k8k_C 18 KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HN-G-----QVTGVDWAPD-SNRIVTC---GTDR-------N--AY 77 (372)
T ss_dssp TTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CS-S-----CEEEEEEETT-TTEEEEE---ETTS-------C--EE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CC-C-----cccEEEEeCC-CCEEEEE---cCCC-------e--EE
Confidence 345444444334477899998885322211111 11 1 1456667663 3333222 1222 4 44
Q ss_pred EEEcCCCceeecccCCcccccccCCCCCcceE--ECceEEEEEccCCCcCEEEEEECCCcc-e---eEecCCCCCCCCCC
Q 037345 183 LHTLSTDSWRYLKANELSDYSFLGGQQSENTY--LDRICYWIAWRYNNCQEILSFHMRDEA-F---HVIKCPDNSYFPNP 256 (357)
Q Consensus 183 vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~i~~fD~~~e~-~---~~i~lP~~~~~~~~ 256 (357)
+|+..++.+............ ...+. -+|........+ ..|..+|+.+.. + ..+..+.. ...
T Consensus 78 vwd~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~~l~~~~~d---~~v~i~d~~~~~~~~~~~~~~~~~~---~~i 145 (372)
T 1k8k_C 78 VWTLKGRTWKPTLVILRINRA------ARCVRWAPNEKKFAVGSGS---RVISICYFEQENDWWVCKHIKKPIR---STV 145 (372)
T ss_dssp EEEEETTEEEEEEECCCCSSC------EEEEEECTTSSEEEEEETT---SSEEEEEEETTTTEEEEEEECTTCC---SCE
T ss_pred EEECCCCeeeeeEEeecCCCc------eeEEEECCCCCEEEEEeCC---CEEEEEEecCCCcceeeeeeecccC---CCe
Confidence 999888876543211100000 11111 134333333222 356666666544 1 22222211 111
Q ss_pred -eEEEE-CCeEEEEEecCCCCeEEEEEEcC---------C-------eeEEEEEEccCCceeEEEEEeeCCcEEEE-eeC
Q 037345 257 -ILGVY-DNSLHFLDFDRSESCFEKWVMKE---------G-------SWTKQLSVGPILGVLRALEFWKNGSFFIE-SNT 317 (357)
Q Consensus 257 -~l~~~-~g~L~l~~~~~~~~~~~iW~l~~---------~-------~W~~~~~i~~~~~~~~~~~~~~~~~i~~~-~~~ 317 (357)
.+... +|++.+++. ....+.+|-+.. . .-.....+........-+.+..++..++. ..+
T Consensus 146 ~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 223 (372)
T 1k8k_C 146 LSLDWHPNSVLLAAGS--CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD 223 (372)
T ss_dssp EEEEECTTSSEEEEEE--TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred eEEEEcCCCCEEEEEc--CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC
Confidence 22222 566555544 467899998641 0 11223333222222344555566665554 457
Q ss_pred CeEEEEECCCCcEEEe
Q 037345 318 NQLLLYDPNTRALRDV 333 (357)
Q Consensus 318 ~~~~~yd~~t~~~~~v 333 (357)
+.+..||+++++....
T Consensus 224 ~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 224 STVCLADADKKMAVAT 239 (372)
T ss_dssp TEEEEEEGGGTTEEEE
T ss_pred CEEEEEECCCCceeEE
Confidence 8899999987775433
No 153
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=42.32 E-value=35 Score=24.79 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=28.1
Q ss_pred eEEEEecccc-chhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEE
Q 037345 116 RISIWNLATR-EFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFIL 165 (357)
Q Consensus 116 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~ 165 (357)
.+++.||.|+ .|+..-... . ...+-+|+..+.|+|+.+.
T Consensus 12 ~V~~~D~~tk~~W~p~g~~~-----~------~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 12 HVFQIDPNTKKNWVPTSKHA-----V------TVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEECTTTSCSEEESCSSC-----E------EEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCCceEeCCCCc-----e------EEEEEEcCCCCEEEEEEcc
Confidence 6799999996 896433221 1 5567888888899999854
No 154
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=41.59 E-value=1.4e+02 Score=24.19 Aligned_cols=111 Identities=18% Similarity=0.192 Sum_probs=57.5
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEE
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSV 293 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i 293 (357)
+|.+||..... ..|..+|++...-..+- +...... ..++.. +|.|+++........+....++. +-.+.. .
T Consensus 90 ~~~lyv~d~~~---~~I~~~~~~g~~~~~~~-~~~~~~P-~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~-~ 162 (267)
T 1npe_A 90 GRTIFWTDSQL---DRIEVAKMDGTQRRVLF-DTGLVNP-RGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRIL-A 162 (267)
T ss_dssp TTEEEEEETTT---TEEEEEETTSCSCEEEE-CSSCSSE-EEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEE-E
T ss_pred CCeEEEEECCC---CEEEEEEcCCCCEEEEE-ECCCCCc-cEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEE-E
Confidence 57999987643 58999999865444331 2111111 233433 57788876531123444444433 111111 1
Q ss_pred ccCCceeEEEEEeeC-CcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 294 GPILGVLRALEFWKN-GSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 294 ~~~~~~~~~~~~~~~-~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
.........+++..+ +.+|+... .+.+..+|++++..+.+
T Consensus 163 ~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 163 QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 111112334444444 45666554 46899999987665554
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=41.27 E-value=1.6e+02 Score=24.90 Aligned_cols=95 Identities=9% Similarity=0.043 Sum_probs=51.7
Q ss_pred cCEEEEEECCCcceeEecCCCCCCCCCCeEE-EECCe-EEEEEecC-CCCeEEEEEEcC--CeeEEEEEEccCCceeEEE
Q 037345 229 CQEILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNS-LHFLDFDR-SESCFEKWVMKE--GSWTKQLSVGPILGVLRAL 303 (357)
Q Consensus 229 ~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~-L~l~~~~~-~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~ 303 (357)
...+..+|.++.++..+... ..... ..+. .-+|+ |+++.... ....+.+|.++. +.......+.........+
T Consensus 28 ~i~~~~~d~~~g~~~~~~~~-~~~~p-~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~ 105 (361)
T 3scy_A 28 GIYTFRFNEETGESLPLSDA-EVANP-SYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYL 105 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEE-ECSCC-CSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEE
T ss_pred CEEEEEEeCCCCCEEEeecc-cCCCC-ceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEE
Confidence 34667778888887765432 11111 1233 34576 44443321 246899999987 5666665554221112223
Q ss_pred EEeeCCcEEEEee--CCeEEEEECCC
Q 037345 304 EFWKNGSFFIESN--TNQLLLYDPNT 327 (357)
Q Consensus 304 ~~~~~~~i~~~~~--~~~~~~yd~~t 327 (357)
.+ +++.++... ++.+..||+++
T Consensus 106 ~~--dg~~l~~~~~~~~~v~~~~~~~ 129 (361)
T 3scy_A 106 TT--NGKNIVTANYSGGSITVFPIGQ 129 (361)
T ss_dssp EE--CSSEEEEEETTTTEEEEEEBCT
T ss_pred EE--CCCEEEEEECCCCEEEEEEeCC
Confidence 33 555444433 56789999874
No 156
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=40.94 E-value=1.6e+02 Score=24.74 Aligned_cols=70 Identities=7% Similarity=0.053 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
+|++.+.+. .+..+.||-+++ ..+.....+........-+.+..++.+++... ++.+..||..++..+.+
T Consensus 118 ~g~~las~s--~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 118 DGYYLATCS--RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECV 190 (330)
T ss_dssp TSCEEEEEE--TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEe--CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEE
No 157
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=40.78 E-value=1.6e+02 Score=24.49 Aligned_cols=29 Identities=10% Similarity=-0.020 Sum_probs=17.4
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEecCC
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCP 248 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP 248 (357)
+|.+|.-... ..|.+||...+......++
T Consensus 147 ~g~l~vgt~~----~~l~~~d~~g~~~~~~~~~ 175 (330)
T 3hxj_A 147 DGTIYVGSND----NYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp TSCEEEECTT----SEEEEECTTSCEEEEEECS
T ss_pred CCEEEEEcCC----CEEEEECCCCCEeEEEecC
Confidence 6776654433 3899999984443344444
No 158
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=40.17 E-value=2.6e+02 Score=26.90 Aligned_cols=98 Identities=10% Similarity=0.180 Sum_probs=48.8
Q ss_pred CEEEEEECCCc-ceeEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEe
Q 037345 230 QEILSFHMRDE-AFHVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFW 306 (357)
Q Consensus 230 ~~i~~fD~~~e-~~~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 306 (357)
..|..+|+.+. ..... +.... ..-..+... +|.+.+++. ....+.+|-++...-......... .-...+.+.
T Consensus 119 g~i~vw~~~~~~~~~~~-~~~~~-~~v~~~~~~p~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~~~~~-~~v~~~~~~ 193 (814)
T 3mkq_A 119 LTVKLWNWENNWALEQT-FEGHE-HFVMCVAFNPKDPSTFASGC--LDRTVKVWSLGQSTPNFTLTTGQE-RGVNYVDYY 193 (814)
T ss_dssp SEEEEEEGGGTSEEEEE-EECCS-SCEEEEEEETTEEEEEEEEE--TTSEEEEEETTCSSCSEEEECCCT-TCCCEEEEC
T ss_pred CEEEEEECCCCceEEEE-EcCCC-CcEEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCcceeEEecCCC-CCEEEEEEE
Confidence 47888888765 22211 11111 110122222 355444444 467899998876211111111111 112334444
Q ss_pred e--CCcEEEE-eeCCeEEEEECCCCcEEE
Q 037345 307 K--NGSFFIE-SNTNQLLLYDPNTRALRD 332 (357)
Q Consensus 307 ~--~~~i~~~-~~~~~~~~yd~~t~~~~~ 332 (357)
. ++..++. ..++.+..||+++++...
T Consensus 194 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 222 (814)
T 3mkq_A 194 PLPDKPYMITASDDLTIKIWDYQTKSCVA 222 (814)
T ss_dssp CSTTCCEEEEECTTSEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCcEEE
Confidence 3 5555554 447789999998877543
No 159
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=39.56 E-value=1.8e+02 Score=24.79 Aligned_cols=108 Identities=11% Similarity=0.087 Sum_probs=56.0
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEE--ECCeEEEEEecCCCCeEEEEEEcC-CeeEEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGV--YDNSLHFLDFDRSESCFEKWVMKE-GSWTKQL 291 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~--~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~ 291 (357)
.+|.+||..... ..|..+|++...-..+-. ...... ..+++ .+|.|+..... ... .|+..+- ++-.+..
T Consensus 89 ~~g~ly~~d~~~---~~I~~~~~dG~~~~~l~~-~~~~~P-~giavdp~~g~ly~td~~-~~~--~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 89 LGEKLYWTDSET---NRIEVSNLDGSLRKVLFW-QELDQP-RAIALDPSSGFMYWTDWG-EVP--KIERAGMDGSSRFII 160 (318)
T ss_dssp TTTEEEEEETTT---TEEEEEETTSCSCEEEEC-SSCSSE-EEEEEEGGGTEEEEEECS-SSC--EEEEEETTSCSCEEE
T ss_pred CCCeEEEEECCC---CEEEEEECCCCcEEEEEe-CCCCCc-cEEEEeCCCCEEEEEecC-CCC--EEEEEEcCCCCeEEE
Confidence 478999987543 589999998765443321 111111 23343 35778876642 123 3455443 2212111
Q ss_pred EEccCCceeEE--EEEee-CCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 292 SVGPILGVLRA--LEFWK-NGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 292 ~i~~~~~~~~~--~~~~~-~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
+. ..+..| +++.. ++.+|+... ...+..+|++.+..+.+
T Consensus 161 -~~--~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 161 -IN--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp -EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred -EE--CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 11 122334 44443 455666654 45788888876555555
No 160
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=39.04 E-value=1.6e+02 Score=24.22 Aligned_cols=64 Identities=8% Similarity=0.184 Sum_probs=40.2
Q ss_pred CeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeC--CcEEEE-eeCCeEEEEECCCC
Q 037345 263 NSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKN--GSFFIE-SNTNQLLLYDPNTR 328 (357)
Q Consensus 263 g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~--~~i~~~-~~~~~~~~yd~~t~ 328 (357)
|.+.+.+. .+..+.||-++.+.|.....+........-+.+..+ +.+++. ..++.+..||++++
T Consensus 67 g~~l~s~s--~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCS--YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEE--TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCEEEEEc--CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 66555554 468999999987666665555432222344455443 555554 44788899998865
No 161
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.12 E-value=29 Score=22.69 Aligned_cols=20 Identities=20% Similarity=0.489 Sum_probs=15.6
Q ss_pred EEEeeCCeEEEEECCCCcEE
Q 037345 312 FIESNTNQLLLYDPNTRALR 331 (357)
Q Consensus 312 ~~~~~~~~~~~yd~~t~~~~ 331 (357)
.....++++|+||..|++-.
T Consensus 24 ~v~T~dGR~fyyN~~Tk~S~ 43 (73)
T 2dk7_A 24 VVWTGDERVFFYNPTTRLSM 43 (73)
T ss_dssp EEEESSSCEEEEETTTTEEC
T ss_pred EEECCCCCEEEecCccccee
Confidence 34456899999999998753
No 162
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=37.04 E-value=1.8e+02 Score=24.05 Aligned_cols=140 Identities=12% Similarity=0.080 Sum_probs=71.4
Q ss_pred EEEEEcCCC--ceeecccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeE
Q 037345 181 VILHTLSTD--SWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPIL 258 (357)
Q Consensus 181 ~~vyss~t~--~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l 258 (357)
+++++..|+ .|+.-..... ... ...+.-+|.++. ... ..|..||.+.+....+..|....-. ..-
T Consensus 17 v~~~d~~tG~~~w~~~~~~~~--~~~-----~~~~~pdG~ilv-s~~----~~V~~~d~~G~~~W~~~~~~~~~~~-~~~ 83 (276)
T 3no2_A 17 IAIINKDTKEIVWEYPLEKGW--ECN-----SVAATKAGEILF-SYS----KGAKMITRDGRELWNIAAPAGCEMQ-TAR 83 (276)
T ss_dssp EEEEETTTTEEEEEEECCTTC--CCC-----EEEECTTSCEEE-ECB----SEEEEECTTSCEEEEEECCTTCEEE-EEE
T ss_pred EEEEECCCCeEEEEeCCCccC--CCc-----CeEECCCCCEEE-eCC----CCEEEECCCCCEEEEEcCCCCcccc-ccE
Confidence 338887676 4765332100 000 223334777776 433 3799999965555556665321000 011
Q ss_pred EEECCeEEEEEecCCCCeEEEEEEcC-CeeEEEEEEccC--Cc--eeEEEEEeeCCcEEEEee-CCeEEEEECCCCcEEE
Q 037345 259 GVYDNSLHFLDFDRSESCFEKWVMKE-GSWTKQLSVGPI--LG--VLRALEFWKNGSFFIESN-TNQLLLYDPNTRALRD 332 (357)
Q Consensus 259 ~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~--~~--~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~ 332 (357)
...+|++.++... ..-.|+.++. ++......+... .. ....+....+|.+++... ++.++.||++.+.+.+
T Consensus 84 ~~~dG~~lv~~~~---~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~ 160 (276)
T 3no2_A 84 ILPDGNALVAWCG---HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNS 160 (276)
T ss_dssp ECTTSCEEEEEES---TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEecC---CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEE
Confidence 2336776665542 1335566654 333333333211 11 112233455777776543 6789999999666666
Q ss_pred eeec
Q 037345 333 VGLG 336 (357)
Q Consensus 333 v~~~ 336 (357)
.+.+
T Consensus 161 ~~~~ 164 (276)
T 3no2_A 161 VKLS 164 (276)
T ss_dssp EECS
T ss_pred EECC
Confidence 6543
No 163
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=36.97 E-value=1.9e+02 Score=24.39 Aligned_cols=108 Identities=11% Similarity=0.091 Sum_probs=56.9
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcC-CeeEEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKE-GSWTKQL 291 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~ 291 (357)
.+|.+||..... ..|..+|++...-..+--. ..... ..+++. +|.|+++... ... .|+..+- ++-.+..
T Consensus 87 ~~~~ly~~d~~~---~~I~~~~~~g~~~~~~~~~-~~~~P-~~iavdp~~g~ly~~d~~-~~~--~I~~~~~dG~~~~~~ 158 (316)
T 1ijq_A 87 IHSNIYWTDSVL---GTVSVADTKGVKRKTLFRE-NGSKP-RAIVVDPVHGFMYWTDWG-TPA--KIKKGGLNGVDIYSL 158 (316)
T ss_dssp TTTEEEEEETTT---TEEEEEETTSSSEEEEEEC-TTCCE-EEEEEETTTTEEEEEECS-SSC--EEEEEETTSCCEEEE
T ss_pred cCCeEEEEECCC---CEEEEEeCCCCceEEEEEC-CCCCc-ceEEeCCCCCEEEEEccC-CCC--eEEEEcCCCCCeEEE
Confidence 478999987543 5899999987654433211 11111 234443 6778876642 113 3444432 2212211
Q ss_pred EEccCCceeEE--EEEee-CCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 292 SVGPILGVLRA--LEFWK-NGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 292 ~i~~~~~~~~~--~~~~~-~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
+.. .+..| +++.. ++.+|+... ...+..+|++.+..+.+
T Consensus 159 -~~~--~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 159 -VTE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp -ECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred -EEC--CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 111 22334 44443 456666654 45788889887666655
No 164
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=36.95 E-value=2e+02 Score=24.71 Aligned_cols=195 Identities=14% Similarity=0.158 Sum_probs=99.8
Q ss_pred ecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceE
Q 037345 101 GNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTE 180 (357)
Q Consensus 101 ~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (357)
+..+|.|...+....+++.+++.++....+...... . ..++.+|+..+...+.- .. ....+
T Consensus 81 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~---~------p~glavd~~~g~ly~~d----~~------~~~I~ 141 (349)
T 3v64_C 81 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE---S------PGGLAVDWVHDKLYWTD----SG------TSRIE 141 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS---C------CCEEEEETTTTEEEEEE----TT------TTEEE
T ss_pred eccccEEEEEeccCCceEEEecCCCCceEEEeCCCC---C------ccEEEEecCCCeEEEEc----CC------CCeEE
Confidence 456788877776656788888887765444322211 1 35778887655322211 11 12434
Q ss_pred EEEEEcCCCceeecccCCcccccccCCCCCcceE---ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCe
Q 037345 181 VILHTLSTDSWRYLKANELSDYSFLGGQQSENTY---LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPI 257 (357)
Q Consensus 181 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~ 257 (357)
+++..+..-+.+... .+.. -.++. .+|.+||..... ...|..+|++...-..+- ....... -.
T Consensus 142 --~~~~dG~~~~~l~~~---~l~~-----P~~iavdp~~g~ly~td~~~--~~~I~r~~~dG~~~~~~~-~~~~~~P-nG 207 (349)
T 3v64_C 142 --VANLDGAHRKVLLWQ---SLEK-----PRAIALHPMEGTIYWTDWGN--TPRIEASSMDGSGRRIIA-DTHLFWP-NG 207 (349)
T ss_dssp --EEETTSCSCEEEECT---TCSC-----EEEEEEETTTTEEEEEECSS--SCEEEEEETTSCSCEESC-CSSCSCE-EE
T ss_pred --EEcCCCCceEEEEeC---CCCC-----cceEEEecCcCeEEEeccCC--CCEEEEEeCCCCCcEEEE-ECCCCCc-ce
Confidence 777665432222111 1110 12333 368999987643 368999999876544331 1111111 13
Q ss_pred EEE--ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEe-eCCcEEEEee-CCeEEEEECCC-CcEEE
Q 037345 258 LGV--YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFW-KNGSFFIESN-TNQLLLYDPNT-RALRD 332 (357)
Q Consensus 258 l~~--~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~~~i~~~~~-~~~~~~yd~~t-~~~~~ 332 (357)
|+. .+|+|+++.. ...++...-++. +-.+. .+.. .+..|.++. .++.+|+... ...+..+|..+ +..+.
T Consensus 208 la~d~~~~~lY~aD~--~~~~I~~~~~dG-~~~~~-~~~~--~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 208 LTIDYAGRRMYWVDA--KHHVIERANLDG-SHRKA-VISQ--GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEI 281 (349)
T ss_dssp EEEETTTTEEEEEET--TTTEEEEEETTS-CSCEE-EECS--SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEEeCCCCEEEEEEC--CCCEEEEEeCCC-CceEE-EEeC--CCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEE
Confidence 444 3677888765 344554444443 11111 1211 123454443 3466776654 56899999544 44455
Q ss_pred ee
Q 037345 333 VG 334 (357)
Q Consensus 333 v~ 334 (357)
+.
T Consensus 282 i~ 283 (349)
T 3v64_C 282 IR 283 (349)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 165
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=36.78 E-value=50 Score=23.74 Aligned_cols=44 Identities=7% Similarity=0.153 Sum_probs=29.8
Q ss_pred eEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEe
Q 037345 116 RISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNL 167 (357)
Q Consensus 116 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~ 167 (357)
.+++.+|.|++|. |...... + .+...+..|...+.|.|+...-.
T Consensus 12 ~V~~~d~~~~~W~--p~~~g~~--g----vs~V~~~~d~~~~~yrI~~~~l~ 55 (115)
T 1egx_A 12 TVMLYDDGNKRWL--PAGTGPQ--A----FSRVQIYHNPTANSFRVVGRKMQ 55 (115)
T ss_dssp ECBEECTTTSSCC--BSSCSCC--C----CEEEEEEEETTTTEEEEEEEESS
T ss_pred EEEEEcCCCCcee--ECCCCCC--C----ccEEEEEEeCCCCEEEEEEEEcC
Confidence 5688999999975 4432111 1 11467888988889999887543
No 166
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=36.71 E-value=2e+02 Score=24.57 Aligned_cols=61 Identities=8% Similarity=0.165 Sum_probs=37.9
Q ss_pred CCCeEEEEEEcCC--eeEEEEEEccCCceeEEEEEeeCCcEEEEe-eCCeEEEEECCCCcEEEe
Q 037345 273 SESCFEKWVMKEG--SWTKQLSVGPILGVLRALEFWKNGSFFIES-NTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 273 ~~~~~~iW~l~~~--~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~v 333 (357)
....+.||-++.+ .-..............-+.+..+|..++.. .++.+..||+++++....
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~ 164 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSS 164 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 4678999999872 222222222112234455666677776654 477899999999877554
No 167
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=36.58 E-value=2e+02 Score=24.48 Aligned_cols=108 Identities=16% Similarity=0.239 Sum_probs=58.5
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEE
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSV 293 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i 293 (357)
+|.+||..... ...|..+|++...-..+--. ..... -.|+.. +|+|+++.. ....+...-++... .+.. +
T Consensus 133 ~g~ly~td~~~--~~~I~r~~~dG~~~~~~~~~-~l~~P-nglavd~~~~~lY~aD~--~~~~I~~~d~dG~~-~~~~-~ 204 (318)
T 3sov_A 133 SGFMYWTDWGE--VPKIERAGMDGSSRFIIINS-EIYWP-NGLTLDYEEQKLYWADA--KLNFIHKSNLDGTN-RQAV-V 204 (318)
T ss_dssp GTEEEEEECSS--SCEEEEEETTSCSCEEEECS-SCSCE-EEEEEETTTTEEEEEET--TTTEEEEEETTSCS-CEEE-E
T ss_pred CCEEEEEecCC--CCEEEEEEcCCCCeEEEEEC-CCCCc-cEEEEeccCCEEEEEEC--CCCEEEEEcCCCCc-eEEE-e
Confidence 58999987542 35899999986544333111 11111 134443 677888765 34555444444311 1111 1
Q ss_pred ccCCceeEEEEEee-CCcEEEEee-CCeEEEEECCCCcE-EEe
Q 037345 294 GPILGVLRALEFWK-NGSFFIESN-TNQLLLYDPNTRAL-RDV 333 (357)
Q Consensus 294 ~~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~yd~~t~~~-~~v 333 (357)
. .....|.++.- ++.+|+... .+.+..+|..+++. +.+
T Consensus 205 ~--~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 205 K--GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp C--SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred c--CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 1 12345666553 355666543 56899999976654 444
No 168
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=36.43 E-value=2.1e+02 Score=24.69 Aligned_cols=68 Identities=6% Similarity=0.052 Sum_probs=40.1
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEcc-CCceeEEEEEeeCCc-EEEE-eeCCeEEEEECCCCc--EEEe
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGP-ILGVLRALEFWKNGS-FFIE-SNTNQLLLYDPNTRA--LRDV 333 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~-~~~~~~~~~~~~~~~-i~~~-~~~~~~~~yd~~t~~--~~~v 333 (357)
+|++.+++. ....+.||-+.... ....+.. ......-+.+..++. +++. ..++.+..||+++++ +..+
T Consensus 258 ~~~~l~~~~--~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 330 (420)
T 3vl1_A 258 YGKYVIAGH--VSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEF 330 (420)
T ss_dssp TTEEEEEEE--TTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred CCCEEEEEc--CCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhh
Confidence 566555554 46789999887632 2222321 122234455556666 5555 447899999999864 3444
No 169
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=35.82 E-value=57 Score=23.27 Aligned_cols=41 Identities=7% Similarity=0.148 Sum_probs=28.6
Q ss_pred eEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEE
Q 037345 116 RISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFIL 165 (357)
Q Consensus 116 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~ 165 (357)
.+++.+|.|++|. |..... + .+...+..|...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~--p~~~~~---g----~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 12 AVMVYDDANKKWV--PAGGST---G----FSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEETTTTEEE--EGGGCC---S----CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCceE--ECCCCC---C----ceEEEEEEECCCCEEEEEEEE
Confidence 6789999999875 333211 1 114678889888899999875
No 170
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=35.65 E-value=2.2e+02 Score=24.79 Aligned_cols=99 Identities=11% Similarity=0.154 Sum_probs=53.3
Q ss_pred CEEEEEECCCcce-eEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEe
Q 037345 230 QEILSFHMRDEAF-HVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFW 306 (357)
Q Consensus 230 ~~i~~fD~~~e~~-~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 306 (357)
..|..+|+.+.+. ..+..|.... ...-+.. +|++.+++. ....+.||-++...-.....+..... ..-+.+.
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~-v~~~~~~ 266 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHG--AVSSICIDEECCVLILGT--TRGIIDIWDIRFNVLIRSWSFGDHAP-ITHVEVC 266 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGC--CEEEEEECTTSCEEEEEE--TTSCEEEEETTTTEEEEEEBCTTCEE-EEEEEEC
T ss_pred CeEEEEeCCCCeeeEEEccCCCCC--ceEEEEECCCCCEEEEEc--CCCeEEEEEcCCccEEEEEecCCCCc-eEEEEec
Confidence 5899999987654 3344432211 1122222 566555555 46789999988743333322222111 1222221
Q ss_pred ----eCCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 307 ----KNGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 307 ----~~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
.++.+++... ++.+..||+++++....
T Consensus 267 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 267 QFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp TTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred cccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 2344555443 67799999998876554
No 171
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=35.52 E-value=18 Score=21.14 Aligned_cols=16 Identities=31% Similarity=0.378 Sum_probs=10.9
Q ss_pred CCCcHHHHHHHHhcCC
Q 037345 5 DDFSEDLLIEILSRLP 20 (357)
Q Consensus 5 ~~LP~Dll~~IL~rLP 20 (357)
..||.||.+|||+.-.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 3677888888776543
No 172
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=35.13 E-value=2.1e+02 Score=24.37 Aligned_cols=93 Identities=9% Similarity=-0.039 Sum_probs=53.9
Q ss_pred CEEEEEECCCcceeEecCCCCCCCCCCeEE-EECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeC
Q 037345 230 QEILSFHMRDEAFHVIKCPDNSYFPNPILG-VYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKN 308 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~ 308 (357)
..|..+|+.++....+.........-..+. ..+|+..+++. ....+.+|-++.. ....+........-+.+..+
T Consensus 141 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~---~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 141 GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD--STGRLLLLGLDGH---EIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE--TTSEEEEEETTSC---EEEEEECSSSCEEEEEECSS
T ss_pred CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC--CCCCEEEEECCCC---EEEEeccCCCcEEEEEECCC
Confidence 588999999877776654433211111222 23566555554 4679999998542 22233222223344555566
Q ss_pred Cc-EEEE-eeCCeEEEEECCC
Q 037345 309 GS-FFIE-SNTNQLLLYDPNT 327 (357)
Q Consensus 309 ~~-i~~~-~~~~~~~~yd~~t 327 (357)
+. +++. ..++.+..||+++
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCEEEEEeCCC
Confidence 66 5554 4478899999987
No 173
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=34.60 E-value=3.3e+02 Score=26.45 Aligned_cols=143 Identities=11% Similarity=0.106 Sum_probs=70.8
Q ss_pred EEEEcCCCceeecccCCcccccccCCCCCcceEE--CceEEEEEccCCCcCEEEEEECCCcceeEecCCCC----CCCCC
Q 037345 182 ILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL--DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDN----SYFPN 255 (357)
Q Consensus 182 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~----~~~~~ 255 (357)
..|+..++.++........+... ....-.+++. +|. .|+.... .|..+|..+.+|..+..... .....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~i~~i~~d~~g~-lWigt~~----Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~ 311 (795)
T 4a2l_A 238 FLINPKTKEIKNYLHSPSNPKSI-SSNYIRSLAMDSQNR-LWIGTFN----DLNIYHEGTDSFASYSSNPVENGSLSQRS 311 (795)
T ss_dssp EEEETTTTEEEEECCCTTCTTSC-SCSBEEEEEECTTSC-EEEEESS----CEEEEETTTTEEEEECCCTTSTTSCSSSC
T ss_pred EEEeCCCCeEEEeecCCCCcccc-CCCeEEEEEEcCCCC-EEEEeCC----hhheEcCCCCeEEEEecCCCCCCCCCCCc
Confidence 37888887776654321000110 0000222333 454 4554432 68899999999987753221 11111
Q ss_pred -CeEEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCC----ceeEEEEEeeCCcEEEEeeCCeEEEEECCCCc
Q 037345 256 -PILGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPIL----GVLRALEFWKNGSFFIESNTNQLLLYDPNTRA 329 (357)
Q Consensus 256 -~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~ 329 (357)
..+.+ .+|.|.+.+.. ..+..+-.+...+.......... ....-+....+|.+.+-..++.+..||.++++
T Consensus 312 i~~i~~D~~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~ 388 (795)
T 4a2l_A 312 VRSIFMDSQGGMWLGTYF---GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQR 388 (795)
T ss_dssp EEEEEECTTSCEEEEESS---SCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCC
T ss_pred EEEEEEeCCcCEEEEECC---CCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCc
Confidence 12222 24667765532 23333322223232221111111 11233333445778887767789999999998
Q ss_pred EEEe
Q 037345 330 LRDV 333 (357)
Q Consensus 330 ~~~v 333 (357)
++..
T Consensus 389 ~~~~ 392 (795)
T 4a2l_A 389 FTSY 392 (795)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8776
No 174
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=34.45 E-value=2e+02 Score=24.00 Aligned_cols=53 Identities=13% Similarity=-0.005 Sum_probs=33.9
Q ss_pred CEEEEEECCCcceeEecCCCCC-CCCCCeEEEECCeEEEEEecCCCCeEEEEEEcC
Q 037345 230 QEILSFHMRDEAFHVIKCPDNS-YFPNPILGVYDNSLHFLDFDRSESCFEKWVMKE 284 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~lP~~~-~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~ 284 (357)
..|..||...+....+..|... ...-..+...+|.|++... ....+.+..++.
T Consensus 260 ~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~--~~~~i~~~~~~~ 313 (322)
T 2fp8_A 260 PKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTL--FHGSVGILVYDK 313 (322)
T ss_dssp EEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECS--SCSEEEEEEC--
T ss_pred cEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeec--CCCceEEEeccc
Confidence 4799999998888888887643 1112334556888888765 355666655543
No 175
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=34.31 E-value=2.4e+02 Score=24.75 Aligned_cols=164 Identities=12% Similarity=0.085 Sum_probs=0.0
Q ss_pred eEEEeecC--CCeEEEE--eccccchhcCCCC--CCCCC-CccccccceeEEee--eCCCCCeEEEEEEEecCCCCCCCC
Q 037345 106 LFCLHDKN--SNRISIW--NLATREFRALPKW--KGEIP-RHKWVYQLNFGFEL--DSSSNDYKIIFILNLTDDNTRKDS 176 (357)
Q Consensus 106 Lll~~~~~--~~~~~V~--NP~T~~~~~LP~~--~~~~~-~~~~~~~~~~~lg~--d~~~~~ykvv~~~~~~~~~~~~~~ 176 (357)
++...... ..++.|+ ||.|++...+... |.... .. .+|+++ ++.++.+.++....... .
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~------pyGlcly~~~~~g~~yafV~~k~G~------~ 155 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINE------VYGFTLYHSQKTGKYYAMVTGKEGE------F 155 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSS------CCCEEEEECTTTCCEEEEEECSSSE------E
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCC------eeEEEEEecCCCCcEEEEEECCCCe------E
Q ss_pred cceEEEEEEcCCCceeecccCCcccccccCCCCCcceEEC---ceEEEEEccCCCcCEEEEEECC------CcceeEecC
Q 037345 177 VSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLD---RICYWIAWRYNNCQEILSFHMR------DEAFHVIKC 247 (357)
Q Consensus 177 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~---G~lyw~~~~~~~~~~i~~fD~~------~e~~~~i~l 247 (357)
..++ +...+.+...... ...+..+.+..++.++ |.||.--+.. .|..||.+ ......+..
T Consensus 156 ~q~~--l~~~~~g~~~~~l-----VR~f~lgsq~EgcvvDd~~g~Lyv~eEd~----GIw~~da~p~~~~~~~~v~~~~~ 224 (355)
T 3amr_A 156 EQYE--LKADKNGYISGKK-----VRAFKMNSQTEGMAADDEYGRLYIAEEDE----AIWKFSAEPDGGSNGTVIDRADG 224 (355)
T ss_dssp EEEE--EEECTTSCEEEEE-----EEEEECSSCEEEEEEETTTTEEEEEETTT----EEEEEECSTTSCSCCEEEEEBSS
T ss_pred EEEE--EEeCCCCcccceE-----EEEecCCCCcceEEEcCCCCeEEEecccc----eEEEEeCCcCCCCCceEEEEecC
Q ss_pred CCCC-CCCCCeEEEEC---CeEEEEEecCCCCeEEEEEEcC-CeeEEEEEEc
Q 037345 248 PDNS-YFPNPILGVYD---NSLHFLDFDRSESCFEKWVMKE-GSWTKQLSVG 294 (357)
Q Consensus 248 P~~~-~~~~~~l~~~~---g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~ 294 (357)
+... +-..+.|.... |.|.+.++ ...++.|+-++. ..=.-.++|.
T Consensus 225 g~l~aDvEGLai~~~~~g~gyLivSsQ--G~~s~~Vydr~~~~~~vg~f~Ig 274 (355)
T 3amr_A 225 RHLTRDIEGLTIYYAADGKGYLMASSQ--GNSSYAIYDRQGKNKYVADFRIT 274 (355)
T ss_dssp SSBCSCEEEEEEEECGGGCEEEEEEEG--GGTEEEEEESSTTCCEEEEEEEC
T ss_pred CccccCcceEEEEecCCCCEEEEEEcC--CCCEEEEEECCCCCcEEEEEEec
No 176
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=34.09 E-value=55 Score=25.34 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=27.6
Q ss_pred eEEEEecccc-chhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEE
Q 037345 116 RISIWNLATR-EFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFIL 165 (357)
Q Consensus 116 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~ 165 (357)
.+++.||.|+ +|+..-... . ...+-+|...+.|+|+.+.
T Consensus 17 ~Vm~~D~~tk~~WvP~g~~~-----~------~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HVFQIDPNTKKNWVPTSKHA-----V------TVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEECTTSSCCSEESCSSC-----E------EEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCCceeecCCCC-----e------EEEEEEcCCCCEEEEEEcc
Confidence 6799999997 896432221 1 4556688888899999864
No 177
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=33.84 E-value=2.6e+02 Score=25.10 Aligned_cols=103 Identities=10% Similarity=-0.017 Sum_probs=59.1
Q ss_pred CEEEEEECCCcceeEecC-C----CC----C--CCCCCeEEEEC-CeEEEEEecCC-----CCeEEEEEEcCCeeEEEEE
Q 037345 230 QEILSFHMRDEAFHVIKC-P----DN----S--YFPNPILGVYD-NSLHFLDFDRS-----ESCFEKWVMKEGSWTKQLS 292 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~l-P----~~----~--~~~~~~l~~~~-g~L~l~~~~~~-----~~~~~iW~l~~~~W~~~~~ 292 (357)
..+.++|+.++....+.. + .. . .........-+ ++|++...... ...=+||+.+-.++..+.+
T Consensus 286 g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~ 365 (426)
T 3c75_H 286 GKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINK 365 (426)
T ss_dssp SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE
T ss_pred CcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEE
Confidence 378899998766554321 1 00 0 11111122223 55777764311 1245789998877777777
Q ss_pred EccCCceeEEEEEeeCCc-EEEEee--CCeEEEEECCCCcEEEe
Q 037345 293 VGPILGVLRALEFWKNGS-FFIESN--TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 293 i~~~~~~~~~~~~~~~~~-i~~~~~--~~~~~~yd~~t~~~~~v 333 (357)
|... ....-+.+..+|+ .++..+ ++.+.++|.+|.+..+-
T Consensus 366 I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 366 IELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp EEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 7532 1223345556777 555544 78999999999998543
No 178
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=32.75 E-value=2.1e+02 Score=23.55 Aligned_cols=135 Identities=16% Similarity=0.124 Sum_probs=77.5
Q ss_pred ceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccCCCcCEEEEEECCCcce-eEecCCCCCCCCCC
Q 037345 178 STEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRYNNCQEILSFHMRDEAF-HVIKCPDNSYFPNP 256 (357)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~-~~i~lP~~~~~~~~ 256 (357)
... +++..|++=...-..+...+. ..-...++.+|-+.+.. ..+..||..+.+. ..|+.|.. + .
T Consensus 44 ~v~--~vD~~tgkv~~~~~l~~~~fg------eGi~~~~~~ly~ltw~~---~~v~v~D~~tl~~~~ti~~~~~--G--w 108 (243)
T 3mbr_X 44 SVR--KVDLETGRILQRAEVPPPYFG------AGIVAWRDRLIQLTWRN---HEGFVYDLATLTPRARFRYPGE--G--W 108 (243)
T ss_dssp EEE--EEETTTCCEEEEEECCTTCCE------EEEEEETTEEEEEESSS---SEEEEEETTTTEEEEEEECSSC--C--C
T ss_pred eEE--EEECCCCCEEEEEeCCCCcce------eEEEEeCCEEEEEEeeC---CEEEEEECCcCcEEEEEeCCCC--c--e
Confidence 544 899988754321111110111 22345678999998764 6999999987554 56777642 2 3
Q ss_pred eEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccC---Cce--eEEEEEeeCCcEEEEe-eCCeEEEEECCCCcE
Q 037345 257 ILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPI---LGV--LRALEFWKNGSFFIES-NTNQLLLYDPNTRAL 330 (357)
Q Consensus 257 ~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~---~~~--~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~ 330 (357)
.|...+++|++... .. .|++++-.+=....+|... ..+ ..-+. +.+|.+|... ....+...|++|+++
T Consensus 109 glt~dg~~L~vSdg---s~--~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe-~~~G~lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 109 ALTSDDSHLYMSDG---TA--VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE-WVNGELLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp EEEECSSCEEEECS---SS--EEEEECTTTCCEEEEEECEETTEECCCEEEEE-EETTEEEEEETTTTEEEEECTTTCBE
T ss_pred EEeeCCCEEEEECC---CC--eEEEEeCCCCeEEEEEEEccCCcccccceeeE-EeCCEEEEEECCCCeEEEEECCCCCE
Confidence 55555666777543 23 3677775222233334321 111 11222 2367877654 377899999999998
Q ss_pred EEe
Q 037345 331 RDV 333 (357)
Q Consensus 331 ~~v 333 (357)
...
T Consensus 183 ~~~ 185 (243)
T 3mbr_X 183 VAW 185 (243)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 179
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=32.74 E-value=3.3e+02 Score=25.84 Aligned_cols=195 Identities=12% Similarity=0.092 Sum_probs=99.6
Q ss_pred EecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcce
Q 037345 100 LGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVST 179 (357)
Q Consensus 100 ~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 179 (357)
.++.+|.|...+....+++.+++-+.....+-..... . ..|+++|...+.-. .. +.. ....
T Consensus 356 ~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~---~------p~GlAvD~~~~~lY--~t--D~~------~~~I 416 (619)
T 3s94_A 356 YDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIA---H------PDGIAVDWVARNLY--WT--DTG------TDRI 416 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS---C------CCEEEEETTTTEEE--EE--ETT------TTEE
T ss_pred EEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCC---C------cCceEEecccCcEE--EE--eCC------CCcE
Confidence 4556788887776656778888876544333222111 1 45788887655322 21 111 2254
Q ss_pred EEEEEEcCCCceeecccCCcccccccCCCCCcceEE---CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCC
Q 037345 180 EVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL---DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNP 256 (357)
Q Consensus 180 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~ 256 (357)
+ +.++.+..-+.+... .+.. -.++.+ +|.|||..... ...|..++++...-..+- ....... -
T Consensus 417 ~--v~~~~G~~~~~l~~~---~l~~-----P~~iavdp~~G~ly~tD~g~--~~~I~r~~~dG~~~~~l~-~~~l~~P-~ 482 (619)
T 3s94_A 417 E--VTRLNGTMRKILISE---DLEE-----PRAIVLDPMVGYMYWTDWGE--IPKIERAALDGSDRVVLV-NTSLGWP-N 482 (619)
T ss_dssp E--EEETTSCSCEEEECT---TCCS-----EEEEEEETTTTEEEEEECSS--SCEEEEEETTSCSCEEEE-CSSCSCE-E
T ss_pred E--EEeCCCCeEEEEEEC---CCCC-----eeeEEEEcCCCcEEEecCCC--CCEEEEEccCCCccEEEE-eCCCCCC-e
Confidence 5 888765533333211 1110 233444 59999998643 358999998765433321 1111111 1
Q ss_pred eEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEee-CCcEEEEee-CCeEEEEECCCCcEEE
Q 037345 257 ILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWK-NGSFFIESN-TNQLLLYDPNTRALRD 332 (357)
Q Consensus 257 ~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~yd~~t~~~~~ 332 (357)
.|+.- +++|+++... ..+++.--++. +=.+.. +. ..+..|.++.- ++.||+... ...+...|..++..+.
T Consensus 483 GlalD~~~~~LY~aD~~--~~~I~~~~~dG-~~~~~~-~~--~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~~~~ 556 (619)
T 3s94_A 483 GLALDYDEGKIYWGDAK--TDKIEVMNTDG-TGRRVL-VE--DKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREV 556 (619)
T ss_dssp EEEEETTTTEEEEEETT--TTEEEEEESSS-CCCEEE-EE--CCCCSSCCEEEETTEEEEECTTSSCEEEEESSSCCEEE
T ss_pred eeEEcccCCEEEEEECC--CCEEEEEecCC-CceEEE-ec--cCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCCceEE
Confidence 24433 6788887653 44554444443 111111 11 12233444432 345666544 4578899998886554
Q ss_pred e
Q 037345 333 V 333 (357)
Q Consensus 333 v 333 (357)
+
T Consensus 557 ~ 557 (619)
T 3s94_A 557 I 557 (619)
T ss_dssp E
T ss_pred E
Confidence 4
No 180
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=32.56 E-value=3.1e+02 Score=25.61 Aligned_cols=111 Identities=7% Similarity=-0.075 Sum_probs=62.8
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEec-CCCCCC--CC---CCeEEEE-CCeEEEEEecCCCCeEEEEEEcC--C
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVIK-CPDNSY--FP---NPILGVY-DNSLHFLDFDRSESCFEKWVMKE--G 285 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~-lP~~~~--~~---~~~l~~~-~g~L~l~~~~~~~~~~~iW~l~~--~ 285 (357)
-+|.+|+....+ +...|..+|+++.++..+. ...... .+ ...+... +|++.+... . ....||.++- +
T Consensus 251 pdg~l~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~--~-~~~~l~~~d~~~~ 326 (662)
T 3azo_A 251 PDGSLIVATDRT-GWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG--K-GAAVLGILDPESG 326 (662)
T ss_dssp TTSCEEEEECTT-SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB--S-SSCEEEEEETTTT
T ss_pred CCCeEEEEECCC-CCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE--c-CccEEEEEECCCC
Confidence 378888776543 3458999999887776542 111110 11 1233333 677665554 3 6788998875 4
Q ss_pred eeEEEEEEccCCceeEEE-EEeeCCcEEEEee-C---CeEEEEECCCCcEEEe
Q 037345 286 SWTKQLSVGPILGVLRAL-EFWKNGSFFIESN-T---NQLLLYDPNTRALRDV 333 (357)
Q Consensus 286 ~W~~~~~i~~~~~~~~~~-~~~~~~~i~~~~~-~---~~~~~yd~~t~~~~~v 333 (357)
.. ..+.........+ .. ..+.+++... . ..++.+|+++++.+.+
T Consensus 327 ~~---~~l~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 327 EL---VDAAGPWTEWAATLTV-SGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp EE---EECCSSCCEEEEEEEE-ETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred cE---EEecCCCCeEEEEEec-CCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 32 2333222222333 22 3445555533 2 3688999999998887
No 181
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=32.52 E-value=2.3e+02 Score=24.08 Aligned_cols=89 Identities=11% Similarity=0.145 Sum_probs=46.6
Q ss_pred CEEEEEECCCcceeE-ecCCCCCCCCCC-eEE-EECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEe
Q 037345 230 QEILSFHMRDEAFHV-IKCPDNSYFPNP-ILG-VYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFW 306 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~-i~lP~~~~~~~~-~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 306 (357)
..|-.+|+.+.+-.. +..... .... .+. ..+|++.+++. .+..+.||-+.... ....+........-+.+.
T Consensus 262 ~~v~lwd~~~~~~~~~~~~~~~--~~~~~~~~~s~~g~~l~~g~--~d~~i~vwd~~~~~--~~~~l~~h~~~v~~l~~s 335 (354)
T 2pbi_B 262 ATCRLYDLRADREVAIYSKESI--IFGASSVDFSLSGRLLFAGY--NDYTINVWDVLKGS--RVSILFGHENRVSTLRVS 335 (354)
T ss_dssp SCEEEEETTTTEEEEEECCTTC--CSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCS--EEEEECCCSSCEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEcCCCc--ccceeEEEEeCCCCEEEEEE--CCCcEEEEECCCCc--eEEEEECCCCcEEEEEEC
Confidence 478888887764322 222111 1111 122 23577665555 46789999886621 223333222234455666
Q ss_pred eCCcEEEEe-eCCeEEEEE
Q 037345 307 KNGSFFIES-NTNQLLLYD 324 (357)
Q Consensus 307 ~~~~i~~~~-~~~~~~~yd 324 (357)
.+|..++.. .++.+..||
T Consensus 336 pdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 336 PDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTSSCEEEEETTSEEEEEC
T ss_pred CCCCEEEEEcCCCCEEecC
Confidence 677765554 366676664
No 182
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=32.39 E-value=2.6e+02 Score=24.61 Aligned_cols=211 Identities=9% Similarity=0.005 Sum_probs=98.9
Q ss_pred ecccceEEEeecCCCeEEEEeccccc----hhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCC
Q 037345 101 GNCNGLFCLHDKNSNRISIWNLATRE----FRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDS 176 (357)
Q Consensus 101 ~s~~GLll~~~~~~~~~~V~NP~T~~----~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~ 176 (357)
+..+|.|...+....+++..++..+. ...+-.... ....++.+|...+...+.- .. .
T Consensus 120 d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~---------~~p~glavD~~~~~lY~~d----~~------~ 180 (400)
T 3p5b_L 120 EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI---------QAPDGLAVDWIHSNIYWTD----SV------L 180 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC---------SCEEEEEEETTTTEEEEEE----TT------T
T ss_pred eeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC---------CCcccEEEEecCCceEEEE----CC------C
Confidence 33456666666544466666665421 111111110 1146788887655432221 11 1
Q ss_pred cceEEEEEEcCCCceeecccCCcccccccCCCCCcceEE---CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCC
Q 037345 177 VSTEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL---DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYF 253 (357)
Q Consensus 177 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~ 253 (357)
...+ +++..+..-+.+... .+.. -.++.+ +|.|||..... ...|..+|++...-..+-.. ...
T Consensus 181 ~~I~--~~~~~g~~~~~l~~~---~~~~-----P~~iavdp~~g~ly~td~~~--~~~I~~~~~dG~~~~~~~~~-~l~- 246 (400)
T 3p5b_L 181 GTVS--VADTKGVKRKTLFRE---NGSK-----PRAIVVDPVHGFMYWTDWGT--PAKIKKGGLNGVDIYSLVTE-NIQ- 246 (400)
T ss_dssp TEEE--EECTTTCSEEEEEEC---SSCC-----EEEEEEETTTTEEEEEECSS--SCCEEEEETTSCSCEEEECS-SCS-
T ss_pred CeEE--EEeCCCCceEEEEeC---CCCC-----cceEEEecccCeEEEEeCCC--CCEEEEEeCCCCccEEEEEC-CCC-
Confidence 2434 777766544333211 1110 123333 68999988543 35789999987554443211 111
Q ss_pred CCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEee-CCcEEEEee-CCeEEEEECCCC-
Q 037345 254 PNPILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWK-NGSFFIESN-TNQLLLYDPNTR- 328 (357)
Q Consensus 254 ~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~yd~~t~- 328 (357)
.-..|+.. +|+|+++.. ....+..--++. +-.+.. +.....+..|.++.- ++.+|+... ...+..+|..++
T Consensus 247 ~P~glavd~~~~~lY~aD~--~~~~I~~~d~dG-~~~~~~-~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDS--KLHSISSIDVNG-GNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp CEEEEEEETTTTEEEEEET--TTTEEEEEETTS-CCCEEE-EECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCC
T ss_pred ceEEEEEEeCCCEEEEEEC--CCCEEEEEeCCC-CccEEE-EeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCC
Confidence 11134443 677888765 234443333333 111111 111122345666653 455666654 467999996555
Q ss_pred cEEEeeecC-CcEEEEEeeec
Q 037345 329 ALRDVGLGT-DGLFLHRYKES 348 (357)
Q Consensus 329 ~~~~v~~~~-~~~~~~~y~~s 348 (357)
..+.+..+. ..+....|.+.
T Consensus 323 ~~~~i~~~~~~p~~i~v~~~~ 343 (400)
T 3p5b_L 323 DVNLLAENLLSPEDMVLFHNL 343 (400)
T ss_dssp CCEEEECSCSCEEEEEEESGG
T ss_pred ceEEEecCCCCCceEEEEeec
Confidence 445553322 22344455544
No 183
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=32.19 E-value=3.6e+02 Score=26.17 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=70.6
Q ss_pred EEEcCCCceeecccCCcccc-cccCCCCCcceEE--CceEEEEEccCCCcCEEEEEECCCcceeEecCCCC-CCCCC-Ce
Q 037345 183 LHTLSTDSWRYLKANELSDY-SFLGGQQSENTYL--DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDN-SYFPN-PI 257 (357)
Q Consensus 183 vyss~t~~W~~~~~~~~~~~-~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~-~~~~~-~~ 257 (357)
.|+..++.++.......... .. ......+++. +|.+.|+...+ ..|..||..++++..+..... ..... ..
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~v~~i~~d~~g~~lWigt~~---~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~ 456 (795)
T 4a2l_A 381 LYNPITQRFTSYTLQEDESARGI-GSNNIKAVYVDEKKSLVYIGTHA---GGLSILHRNSGQVENFNQRNSQLVNENVYA 456 (795)
T ss_dssp EECTTTCCEEEECCC------CC-SCSCEEEEEEETTTTEEEEEETT---TEEEEEETTTCCEEEECTTTSCCSCSCEEE
T ss_pred EEcCCCCcEEEEecCCCCcccCC-CCccEEEEEEcCCCCEEEEEeCc---CceeEEeCCCCcEEEeecCCCCcCCCeeEE
Confidence 77777777766542210000 00 0000223333 57756666442 379999999999988764211 11111 12
Q ss_pred EEEE-CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEc---cC-CceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcE
Q 037345 258 LGVY-DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVG---PI-LGVLRALEFWKNGSFFIESNTNQLLLYDPNTRAL 330 (357)
Q Consensus 258 l~~~-~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~---~~-~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~ 330 (357)
+.+. +|.|.+.+. ..+.++-.+.+.|....... .. .....-+....+|.+++... ..++.||++++++
T Consensus 457 i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 457 ILPDGEGNLWLGTL----SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI 529 (795)
T ss_dssp EEECSSSCEEEEES----SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE
T ss_pred EEECCCCCEEEEec----CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE
Confidence 2222 577877664 22333333335555432210 00 11123333344577877765 7799999988877
No 184
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=32.07 E-value=2.3e+02 Score=23.77 Aligned_cols=108 Identities=15% Similarity=0.100 Sum_probs=64.9
Q ss_pred eEECceEEEEEccCCCcCEEEEEECCCcce-eEecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEE
Q 037345 213 TYLDRICYWIAWRYNNCQEILSFHMRDEAF-HVIKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQL 291 (357)
Q Consensus 213 v~~~G~lyw~~~~~~~~~~i~~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~ 291 (357)
...++.+|-+.+.. ..+.+||.++.+. ..|+.+.. + ..|...+++|++... .. .|++++-.+=....
T Consensus 102 t~~g~~Ly~ltw~~---~~v~V~D~~Tl~~~~ti~~~~e--G--wGLt~Dg~~L~vSdG---s~--~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 102 ASDGERLYQLTWTE---GLLFTWSGMPPQRERTTRYSGE--G--WGLCYWNGKLVRSDG---GT--MLTFHEPDGFALVG 169 (268)
T ss_dssp EECSSCEEEEESSS---CEEEEEETTTTEEEEEEECSSC--C--CCEEEETTEEEEECS---SS--EEEEECTTTCCEEE
T ss_pred EEeCCEEEEEEccC---CEEEEEECCcCcEEEEEeCCCc--e--eEEecCCCEEEEECC---CC--EEEEEcCCCCeEEE
Confidence 34567898888764 6899999987554 56777533 2 345555666776542 22 46777752212333
Q ss_pred EEccC---Cce--eEEEEEeeCCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 292 SVGPI---LGV--LRALEFWKNGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 292 ~i~~~---~~~--~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
+|... ..+ ..-+.+ .+|.+|.-.. +..+...|++|+++...
T Consensus 170 ~I~V~~~g~~v~~lNeLe~-~dG~lyanvw~s~~I~vIDp~TG~V~~~ 216 (268)
T 3nok_A 170 AVQVKLRGQPVELINELEC-ANGVIYANIWHSSDVLEIDPATGTVVGV 216 (268)
T ss_dssp EEECEETTEECCCEEEEEE-ETTEEEEEETTCSEEEEECTTTCBEEEE
T ss_pred EEEeCCCCcccccccccEE-eCCEEEEEECCCCeEEEEeCCCCcEEEE
Confidence 33321 111 122232 3677776543 67899999999998554
No 185
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=31.30 E-value=2.2e+02 Score=23.45 Aligned_cols=67 Identities=13% Similarity=0.131 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCCcEEE
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTRALRD 332 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~ 332 (357)
+|.+.+.+. ....+.||-++... ....+.........+.+..++..++... ++.+..||+++++...
T Consensus 24 ~~~~l~s~~--~dg~v~lWd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 24 TEPWVLTTL--YSGRVELWNYETQV--EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (304)
T ss_dssp SSSEEEEEE--TTSEEEEEETTTTE--EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEc--CCCcEEEEECCCCc--eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEE
No 186
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=31.16 E-value=2.7e+02 Score=24.45 Aligned_cols=95 Identities=11% Similarity=0.175 Sum_probs=59.2
Q ss_pred CEEEEEECCCcceeE-ecCCCCCCCCCCeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeC
Q 037345 230 QEILSFHMRDEAFHV-IKCPDNSYFPNPILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKN 308 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~-i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~ 308 (357)
..|..+|+.+.+... +... ......+..+|...+.+. .+..+.||-+++.. +...... ........+..+
T Consensus 332 g~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~~~~l~s~s--~dg~v~vwd~~~~~--~~~~~~~-~~~~~~~~~~~~ 402 (464)
T 3v7d_B 332 TTIRIWDLENGELMYTLQGH----TALVGLLRLSDKFLVSAA--ADGSIRGWDANDYS--RKFSYHH-TNLSAITTFYVS 402 (464)
T ss_dssp SCEEEEETTTTEEEEEECCC----SSCEEEEEECSSEEEEEE--TTSEEEEEETTTCC--EEEEEEC-TTCCCEEEEEEC
T ss_pred CcEEEEECCCCcEEEEEeCC----CCcEEEEEEcCCEEEEEe--CCCcEEEEECCCCc--eeeeecC-CCCccEEEEEeC
Confidence 478889987765432 2221 111233445666555444 46789999998722 2222221 223455666677
Q ss_pred CcEEEEeeCCeEEEEECCCCcEEEe
Q 037345 309 GSFFIESNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 309 ~~i~~~~~~~~~~~yd~~t~~~~~v 333 (357)
+.+++...++.+..||+++++....
T Consensus 403 ~~~l~~~~dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 403 DNILVSGSENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp SSEEEEEETTEEEEEETTTCCEEES
T ss_pred CCEEEEecCCeEEEEECCCCcEEeh
Confidence 8888877799999999999988654
No 187
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=31.13 E-value=2.3e+02 Score=23.58 Aligned_cols=68 Identities=13% Similarity=0.129 Sum_probs=41.6
Q ss_pred CCeEEEEEecCCCCeEEEEEEcC-CeeEEEEEEccCCceeEEEEEeeCCcEEEE-eeCCeEEEEECCCCcEEEe
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKE-GSWTKQLSVGPILGVLRALEFWKNGSFFIE-SNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~~v 333 (357)
+|++.++.. ....+.+|-++. .. ....+.....-..-+.+..++..++. ..++.+..||+++++....
T Consensus 186 ~~~~l~~~~--~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 186 KGKYIIAGH--KDGKISKYDVSNNYE--YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp GGCEEEEEE--TTSEEEEEETTTTTE--EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEc--CCCEEEEEECCCCcE--eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 455444444 467899998886 33 22333322222344555566776555 4478999999998877554
No 188
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=30.30 E-value=2.6e+02 Score=23.88 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=52.6
Q ss_pred CEEEEEECCCcceeE-ecCCCCCCCCCCeEEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEee
Q 037345 230 QEILSFHMRDEAFHV-IKCPDNSYFPNPILGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWK 307 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 307 (357)
..|..+|+.+.+... +..... .-..+.. .+|++.+++. ....+.||-++...- ...+........-+.+..
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~ 299 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHG---PISVLEFNDTNKLLLSAS--DDGTLRIWHGGNGNS--QNCFYGHSQSIVSASWVG 299 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSS---CEEEEEEETTTTEEEEEE--TTSCEEEECSSSBSC--SEEECCCSSCEEEEEEET
T ss_pred CeEEEEEcCCCceeeeeccCCC---ceEEEEECCCCCEEEEEc--CCCEEEEEECCCCcc--ceEecCCCccEEEEEECC
Confidence 478899998764432 221111 1012222 2566554444 467899998876221 122222222234445555
Q ss_pred CCcEEEEeeCCeEEEEECCCCcEEEe
Q 037345 308 NGSFFIESNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 308 ~~~i~~~~~~~~~~~yd~~t~~~~~v 333 (357)
++.++....++.+..||+++++....
T Consensus 300 ~~~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 300 DDKVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp TTEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCcEeEe
Confidence 56333345588999999998876554
No 189
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=30.23 E-value=2.4e+02 Score=23.48 Aligned_cols=133 Identities=17% Similarity=0.095 Sum_probs=73.3
Q ss_pred EEEEEcCCCceee-cccCCcccccccCCCCCcce-EECceEEEEEccCCCcCEEEEEECCCcc-eeEecCCCCCCCCCCe
Q 037345 181 VILHTLSTDSWRY-LKANELSDYSFLGGQQSENT-YLDRICYWIAWRYNNCQEILSFHMRDEA-FHVIKCPDNSYFPNPI 257 (357)
Q Consensus 181 ~~vyss~t~~W~~-~~~~~~~~~~~~~~~~~~~v-~~~G~lyw~~~~~~~~~~i~~fD~~~e~-~~~i~lP~~~~~~~~~ 257 (357)
+.+++..|++=.. ++.. ..+. ..++ ..++.+|...+.. ..+.++|..+.+ ...|+.+ .... ..
T Consensus 46 v~~iD~~tg~v~~~i~l~---~~~f-----geGi~~~g~~lyv~t~~~---~~v~viD~~t~~v~~~i~~g-~~~g--~g 111 (266)
T 2iwa_A 46 VRQVALQTGKVENIHKMD---DSYF-----GEGLTLLNEKLYQVVWLK---NIGFIYDRRTLSNIKNFTHQ-MKDG--WG 111 (266)
T ss_dssp EEEEETTTCCEEEEEECC---TTCC-----EEEEEEETTEEEEEETTC---SEEEEEETTTTEEEEEEECC-SSSC--CE
T ss_pred EEEEECCCCCEEEEEecC---CCcc-----eEEEEEeCCEEEEEEecC---CEEEEEECCCCcEEEEEECC-CCCe--EE
Confidence 4499998876322 1111 1111 2233 3456899998764 689999998754 4567766 1122 24
Q ss_pred EEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccC---Cce--eEEEEEeeCCcEEEEee-CCeEEEEECCCCcEE
Q 037345 258 LGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPI---LGV--LRALEFWKNGSFFIESN-TNQLLLYDPNTRALR 331 (357)
Q Consensus 258 l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~---~~~--~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~ 331 (357)
+...+++|++.. ... .|++++-.+-....+|... ..+ ..-+.+. +|.+|.-.. ++.+...|++|+++.
T Consensus 112 lt~Dg~~l~vs~---gs~--~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~ 185 (266)
T 2iwa_A 112 LATDGKILYGSD---GTS--ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLL 185 (266)
T ss_dssp EEECSSSEEEEC---SSS--EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEE
T ss_pred EEECCCEEEEEC---CCC--eEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEE
Confidence 444345576543 233 5677776333334444321 111 1222333 677776543 678999999999874
Q ss_pred Ee
Q 037345 332 DV 333 (357)
Q Consensus 332 ~v 333 (357)
..
T Consensus 186 ~~ 187 (266)
T 2iwa_A 186 GW 187 (266)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 190
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=30.22 E-value=2.6e+02 Score=23.94 Aligned_cols=101 Identities=10% Similarity=0.048 Sum_probs=51.9
Q ss_pred EEEEEECCCcceeEecCCCCCCCCCC-eE-EEECCeEEEEEecCCCC--eEEEEEEcCCeeEE--EEEEccCCceeEEEE
Q 037345 231 EILSFHMRDEAFHVIKCPDNSYFPNP-IL-GVYDNSLHFLDFDRSES--CFEKWVMKEGSWTK--QLSVGPILGVLRALE 304 (357)
Q Consensus 231 ~i~~fD~~~e~~~~i~lP~~~~~~~~-~l-~~~~g~L~l~~~~~~~~--~~~iW~l~~~~W~~--~~~i~~~~~~~~~~~ 304 (357)
.+..++..+............ .... .+ ..-+|+..++....... .+.+|-+....... ...+.....-..-+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~ 276 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFDK-NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMD 276 (365)
T ss_dssp CEEEEETTTCCEEEEECCCCT-TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEE
T ss_pred eEEEEEeccCcceeeeecCCC-CCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEE
Confidence 566666666554332221111 1111 12 23467765555433333 45666666533222 233332222234456
Q ss_pred EeeCCcEEEEe-eCCeEEEEECCCCcEEE
Q 037345 305 FWKNGSFFIES-NTNQLLLYDPNTRALRD 332 (357)
Q Consensus 305 ~~~~~~i~~~~-~~~~~~~yd~~t~~~~~ 332 (357)
+..+|.++... .|+.+..||+++++..+
T Consensus 277 ~Spdg~~lasgs~D~~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 277 VDMKGELAVLASNDNSIALVKLKDLSMSK 305 (365)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred ECCCCCceEEEcCCCEEEEEECCCCcEEE
Confidence 66778877654 47889999999987543
No 191
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=30.13 E-value=2.3e+02 Score=23.35 Aligned_cols=110 Identities=12% Similarity=0.052 Sum_probs=61.1
Q ss_pred ECce-EEEEEccCCCcCEEEEEECCCcce----eEecCCCCCCCCCCeEE-EECCe-EEEEEecCCCCeEEEEEEcCCee
Q 037345 215 LDRI-CYWIAWRYNNCQEILSFHMRDEAF----HVIKCPDNSYFPNPILG-VYDNS-LHFLDFDRSESCFEKWVMKEGSW 287 (357)
Q Consensus 215 ~~G~-lyw~~~~~~~~~~i~~fD~~~e~~----~~i~lP~~~~~~~~~l~-~~~g~-L~l~~~~~~~~~~~iW~l~~~~W 287 (357)
-+|. +|..... ...|..+|+.+.+. ..++..... ..+. .-+|+ |++... ....+.+|-++..+.
T Consensus 185 pdg~~l~v~~~~---~~~v~v~d~~~~~~~~~~~~~~~~~~~----~~~~~spdg~~l~v~~~--~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 185 PDGNFAFVANLI---GNSIGILETQNPENITLLNAVGTNNLP----GTIVVSRDGSTVYVLTE--STVDVFNFNQLSGTL 255 (331)
T ss_dssp TTSSEEEEEETT---TTEEEEEECSSTTSCEEEEEEECSSCC----CCEEECTTSSEEEEECS--SEEEEEEEETTTTEE
T ss_pred CCCCEEEEEeCC---CCeEEEEECCCCcccceeeeccCCCCC----ceEEECCCCCEEEEEEc--CCCEEEEEECCCCce
Confidence 3665 5544433 35799999987664 334332111 1233 34677 444433 345677776665444
Q ss_pred EEEEEEccC----Cc-e--eEEEEEeeCCcEEEE-ee-CCeEEEEECCCCcEEEe
Q 037345 288 TKQLSVGPI----LG-V--LRALEFWKNGSFFIE-SN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 288 ~~~~~i~~~----~~-~--~~~~~~~~~~~i~~~-~~-~~~~~~yd~~t~~~~~v 333 (357)
.....+... .. . ...+.+..+|+.+++ .. ++.+..||++++....+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 256 SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 333333311 10 1 123567777775544 33 56899999999998877
No 192
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=30.10 E-value=2.7e+02 Score=24.16 Aligned_cols=69 Identities=12% Similarity=0.060 Sum_probs=41.1
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEe-eCCeEEEEECCCCcEEE
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIES-NTNQLLLYDPNTRALRD 332 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~ 332 (357)
+|.+.+++. ....+.||-++...-.....-........-+.+..++..++.. .++.+..||+++++...
T Consensus 181 ~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALT--NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEE--TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEe--CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEE
Confidence 355555554 4678999988873222222221112234445556667766654 47789999999877644
No 193
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=29.86 E-value=2.4e+02 Score=23.42 Aligned_cols=68 Identities=7% Similarity=0.091 Sum_probs=40.3
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEee--CCcEEEE-eeCCeEEEEECCCCcEE
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWK--NGSFFIE-SNTNQLLLYDPNTRALR 331 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~--~~~i~~~-~~~~~~~~yd~~t~~~~ 331 (357)
+|++.+.+. .+..+.||-++.........+.....-..-+.+.. ++.+++. ..|+.+..||+++++++
T Consensus 24 ~g~~lasgs--~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 24 YGTRLATCS--SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE 94 (316)
T ss_dssp GGCEEEEEE--TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC
T ss_pred CCCEEEEEe--CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce
Confidence 566554444 46899999998754444444432222233344432 3555554 44788999999987543
No 194
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=29.41 E-value=3.7e+02 Score=25.39 Aligned_cols=191 Identities=12% Similarity=0.051 Sum_probs=92.0
Q ss_pred CeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEEEEEcCCC-ceee
Q 037345 115 NRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVILHTLSTD-SWRY 193 (357)
Q Consensus 115 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~-~W~~ 193 (357)
.+++++|..|++...+...... .. ....+.+.|.. ++-++.. ..... ....+.+++..++ ..+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~--~~-----~~~~~~~spdg-~~l~~~~-~~~~~------~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK--EK-----FLTNLSWSPDE-NILYVAE-VNRAQ------NECKVNAYDAETGRFVRT 299 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT--TC-----EEEEEEECTTS-SEEEEEE-ECTTS------CEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceEeeccCCCC--ce-----eEeeEEEECCC-CEEEEEE-eCCCC------CeeEEEEEECCCCceeeE
Confidence 4689999999886655432111 01 13345555433 3322221 11111 1233448888887 6665
Q ss_pred cccCCcccccccCCCCCcceEE--CceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCC-e-EEE-ECCe-EEE
Q 037345 194 LKANELSDYSFLGGQQSENTYL--DRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNP-I-LGV-YDNS-LHF 267 (357)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~-~-l~~-~~g~-L~l 267 (357)
+............. .....- +|.+.+....+ +...|..+|..++....+... .... . +.. -+|+ |++
T Consensus 300 ~~~~~~~~~~~~~~--~~~~sp~~dg~~l~~~~~~-g~~~l~~~~~~~~~~~~l~~~----~~~v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 300 LFVETDKHYVEPLH--PLTFLPGSNNQFIWQSRRD-GWNHLYLYDTTGRLIRQVTKG----EWEVTNFAGFDPKGTRLYF 372 (706)
T ss_dssp EEEEECSSCCCCCS--CCEECTTCSSEEEEEECTT-SSCEEEEEETTSCEEEECCCS----SSCEEEEEEECTTSSEEEE
T ss_pred EEEccCCCeECccC--CceeecCCCCEEEEEEccC-CccEEEEEECCCCEEEecCCC----CeEEEeeeEEcCCCCEEEE
Confidence 43211100000000 112222 78766665433 456888888777766654321 1111 1 222 2455 555
Q ss_pred EEecCCCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEE-eeC----CeEEEEECCCCcEE
Q 037345 268 LDFDRSESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIE-SNT----NQLLLYDPNTRALR 331 (357)
Q Consensus 268 ~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~-~~~----~~~~~yd~~t~~~~ 331 (357)
...........||..+- +.. ..+..... ..-+.+..+|+.++. ..+ ..+..+|+++++.+
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~ 439 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGKT---KDLTPESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHT 439 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCCC---EESCCSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEEE
T ss_pred EecCCCCceEEEEEEEcCCCCc---eeccCCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeEe
Confidence 55432223567787764 321 22322222 234555666765443 232 46999999988743
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=28.93 E-value=3.6e+02 Score=25.18 Aligned_cols=194 Identities=11% Similarity=0.062 Sum_probs=96.3
Q ss_pred cceEEEeecCCCeEEEEeccccchhc-CCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceEEE
Q 037345 104 NGLFCLHDKNSNRISIWNLATREFRA-LPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTEVI 182 (357)
Q Consensus 104 ~GLll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 182 (357)
++++.+......++.|+|+.|++... +|.... ..++.+.+.. +|-.+. . .. -.+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~-----------p~~v~~SpDG-r~lyv~--~-~d-------g~V~-- 221 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-----------VHISRLSASG-RYLFVI--G-RD-------GKVN-- 221 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSC-----------EEEEEECTTS-CEEEEE--E-TT-------SEEE--
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC-----------ccceEECCCC-CEEEEE--c-CC-------CeEE--
Confidence 45777777666688999999987653 443221 2356666543 342222 1 11 1444
Q ss_pred EEEcCCCceeecccCCcccccccCCCCCcceE----ECce-EEEEEccCCCcCEEEEEECCCcce-eEecCCCCC-CC--
Q 037345 183 LHTLSTDSWRYLKANELSDYSFLGGQQSENTY----LDRI-CYWIAWRYNNCQEILSFHMRDEAF-HVIKCPDNS-YF-- 253 (357)
Q Consensus 183 vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~----~~G~-lyw~~~~~~~~~~i~~fD~~~e~~-~~i~lP~~~-~~-- 253 (357)
+|+..+.+-+.+...+....+. .-.+. -+|. +|..... ...+..+|..+.+- ..|+..... +.
T Consensus 222 viD~~~~t~~~v~~i~~G~~P~-----~ia~s~~~~pDGk~l~v~n~~---~~~v~ViD~~t~~~~~~i~~~~~~~~~~~ 293 (567)
T 1qks_A 222 MIDLWMKEPTTVAEIKIGSEAR-----SIETSKMEGWEDKYAIAGAYW---PPQYVIMDGETLEPKKIQSTRGMTYDEQE 293 (567)
T ss_dssp EEETTSSSCCEEEEEECCSEEE-----EEEECCSTTCTTTEEEEEEEE---TTEEEEEETTTCCEEEEEECCEECTTTCC
T ss_pred EEECCCCCCcEeEEEecCCCCc-----eeEEccccCCCCCEEEEEEcc---CCeEEEEECCCCcEEEEEecccccccccc
Confidence 8887522212222111101110 11222 1564 4444433 35788899877544 345543221 11
Q ss_pred C--C---CeEEEE-CCeEEEEEecCCCCeEEEEEEcC--CeeEEEEEEccCCceeEEEEEeeCCcEEEEee--CCeEEEE
Q 037345 254 P--N---PILGVY-DNSLHFLDFDRSESCFEKWVMKE--GSWTKQLSVGPILGVLRALEFWKNGSFFIESN--TNQLLLY 323 (357)
Q Consensus 254 ~--~---~~l~~~-~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~y 323 (357)
+ + ..+... ++...++... ... .||+.+- ....+.-.|+.. ......++..+|..++... ++.+.++
T Consensus 294 ~~p~~rva~i~~s~~~~~~vv~~~-~~g--~v~~vd~~~~~~~~v~~i~~~-~~~~d~~~~pdgr~~~va~~~sn~V~Vi 369 (567)
T 1qks_A 294 YHPEPRVAAILASHYRPEFIVNVK-ETG--KILLVDYTDLNNLKTTEISAE-RFLHDGGLDGSHRYFITAANARNKLVVI 369 (567)
T ss_dssp EESCCCEEEEEECSSSSEEEEEET-TTT--EEEEEETTCSSEEEEEEEECC-SSEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred ccCCCceEEEEEcCCCCEEEEEec-CCC--eEEEEecCCCccceeeeeecc-ccccCceECCCCCEEEEEeCCCCeEEEE
Confidence 0 1 112211 2334444432 223 3444443 333444445432 2345566777788766543 6789999
Q ss_pred ECCCCcEEEe
Q 037345 324 DPNTRALRDV 333 (357)
Q Consensus 324 d~~t~~~~~v 333 (357)
|.+++++...
T Consensus 370 D~~t~kl~~~ 379 (567)
T 1qks_A 370 DTKEGKLVAI 379 (567)
T ss_dssp ETTTTEEEEE
T ss_pred ECCCCcEEEE
Confidence 9999987544
No 196
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=28.69 E-value=2.6e+02 Score=23.46 Aligned_cols=95 Identities=5% Similarity=0.030 Sum_probs=53.1
Q ss_pred CEEEEEECCCcceeE-ecCCCCCCCCCCe-EEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCC--ceeEEEE
Q 037345 230 QEILSFHMRDEAFHV-IKCPDNSYFPNPI-LGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPIL--GVLRALE 304 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~-i~lP~~~~~~~~~-l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~--~~~~~~~ 304 (357)
..|..+|+.+..... +.. . ..... +.. -+|++.+.+. .+..+.||-++...-. ..+.... .-..-+.
T Consensus 206 ~~v~~wd~~~~~~~~~~~~--h--~~~v~~v~~~p~~~~l~s~s--~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~ 277 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFTG--H--ESDINAICFFPNGNAFATGS--DDATCRLFDLRADQEL--MTYSHDNIICGITSVS 277 (340)
T ss_dssp SCEEEEETTTCSEEEEECC--C--SSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEE--EEECCTTCCSCEEEEE
T ss_pred CcEEEEECCCCeeEEEEcC--C--cCCEEEEEEcCCCCEEEEEc--CCCcEEEEECCCCcEE--EEEccCCcccceEEEE
Confidence 477788887765432 221 1 11111 222 2566555554 4678999988863222 2222211 1234455
Q ss_pred EeeCCcEEEEee-CCeEEEEECCCCcEEE
Q 037345 305 FWKNGSFFIESN-TNQLLLYDPNTRALRD 332 (357)
Q Consensus 305 ~~~~~~i~~~~~-~~~~~~yd~~t~~~~~ 332 (357)
+..+|.+++... ++.+..||..+++...
T Consensus 278 ~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 306 (340)
T 1got_B 278 FSKSGRLLLAGYDDFNCNVWDALKADRAG 306 (340)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ECCCCCEEEEECCCCeEEEEEcccCcEee
Confidence 667777776644 7789999998876543
No 197
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=28.05 E-value=2.6e+02 Score=23.15 Aligned_cols=68 Identities=6% Similarity=-0.117 Sum_probs=39.7
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcE-EEEee-CCeEEEEECCCCcEEE
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSF-FIESN-TNQLLLYDPNTRALRD 332 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i-~~~~~-~~~~~~yd~~t~~~~~ 332 (357)
+++++++.. ....+.+|-++...-.+....+.. .-..-+.+..+|+. ++... ++.+..||+++++...
T Consensus 10 ~~~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTN--YPNNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEE--TTTEEEEEETTTTEEEEEEECSSC-CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCEEEEEeC--CCCeEEEEECCCCcEEEEEecCCC-CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 455666555 357788887766443333333220 01234555666764 44433 6789999999987653
No 198
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=27.60 E-value=2.6e+02 Score=23.06 Aligned_cols=100 Identities=8% Similarity=0.000 Sum_probs=54.7
Q ss_pred CEEEEEECCC-cc--eeEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCC--e--eEEEEEEccCC---
Q 037345 230 QEILSFHMRD-EA--FHVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKEG--S--WTKQLSVGPIL--- 297 (357)
Q Consensus 230 ~~i~~fD~~~-e~--~~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~--~--W~~~~~i~~~~--- 297 (357)
..|..+|+.+ .. ......+... .-..+... +|++.+++. ....+.||.++.. . ......+....
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~--~i~~i~~~~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKY--QIRDVALLPKEQEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSS--CEEEEEECSGGGCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred CeEEEEECCccccccceeeecCCCC--ceeEEEECCCCCCEEEEEe--cCCcEEEEEEcCCCcccccccceeeecccccc
Confidence 4888999987 33 3333332221 10122232 466555555 4678999998752 1 12223332211
Q ss_pred ------ceeEEEEEeeCCcEEEE-eeCCeEEEEECCCCcEEEe
Q 037345 298 ------GVLRALEFWKNGSFFIE-SNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 298 ------~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~~v 333 (357)
....-+.+..++..++. ..++.+..||+++++....
T Consensus 246 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288 (342)
T ss_dssp TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred cccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhh
Confidence 12344555566665554 4478899999998876443
No 199
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=27.12 E-value=3e+02 Score=23.61 Aligned_cols=55 Identities=11% Similarity=0.154 Sum_probs=35.7
Q ss_pred EEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcEEEe
Q 037345 277 FEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 277 ~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v 333 (357)
-.||+.+-.+...+.++.... ..-+.+..+|+.++..+.+.+..||.+|++++.+
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLL 340 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEE
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceee
Confidence 356665553345566665433 5556667777766655558899999999955555
No 200
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.09 E-value=2.9e+02 Score=23.41 Aligned_cols=140 Identities=9% Similarity=0.057 Sum_probs=68.4
Q ss_pred EEEEEEcCCCceeecccCCcccccccCCCCCcceE-E-Cce-EEEEEccCC--CcCEEEEEECCCcceeEecCCCCCCCC
Q 037345 180 EVILHTLSTDSWRYLKANELSDYSFLGGQQSENTY-L-DRI-CYWIAWRYN--NCQEILSFHMRDEAFHVIKCPDNSYFP 254 (357)
Q Consensus 180 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~-~-~G~-lyw~~~~~~--~~~~i~~fD~~~e~~~~i~lP~~~~~~ 254 (357)
.+.+++..++..+.+..... .. ..... - +|. +++...... ....|..+|+.+.....+...... ..
T Consensus 169 ~l~~~d~~~g~~~~~~~~~~---~~-----~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~-~~ 239 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQDTA---WL-----GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEG-ES 239 (396)
T ss_dssp EEEEEETTTCCEEEEEEESS---CE-----EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTT-EE
T ss_pred eEEEEECCCCcEEeeccCCc---cc-----ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCC-cc
Confidence 44577877777655432111 00 11112 2 354 666553220 114788899988776544321100 00
Q ss_pred CCeEE-EECCe-EEEEEecCCCCe--EEEEEEcCCeeEEEEEEccCCceeEEEEEee-CCcEEEEe--------------
Q 037345 255 NPILG-VYDNS-LHFLDFDRSESC--FEKWVMKEGSWTKQLSVGPILGVLRALEFWK-NGSFFIES-------------- 315 (357)
Q Consensus 255 ~~~l~-~~~g~-L~l~~~~~~~~~--~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~i~~~~-------------- 315 (357)
-..+. .-+|+ |+++........ +.+|-++.+.-......+ .. . ..+.. +|.+++..
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~~-~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---PC-S-HLMSNFDGSLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---SE-E-EEEECSSSSEEEEEECCC----------
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---CC-C-CCccCCCCceEEEecCCcceeecccccc
Confidence 01122 22566 555554323333 555544444333332222 12 2 44445 67766542
Q ss_pred ---eCCeEEEEECCCCcEEEe
Q 037345 316 ---NTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 316 ---~~~~~~~yd~~t~~~~~v 333 (357)
.+..++.+|+++++.+.+
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp CCCCCCEEEEEETTTTBCCEE
T ss_pred ccCCCCcEEEEecccCceEEc
Confidence 236799999999988776
No 201
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=26.61 E-value=2.9e+02 Score=23.22 Aligned_cols=210 Identities=11% Similarity=0.014 Sum_probs=100.6
Q ss_pred ecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcceE
Q 037345 101 GNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVSTE 180 (357)
Q Consensus 101 ~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 180 (357)
+..+|.++..+....+++++||.+++...+..+. . ..++.+++.. .+- +. . .. .
T Consensus 57 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----~------v~~i~~~~dg-~l~-v~-~---~~-------g-- 110 (326)
T 2ghs_A 57 DPASGTAWWFNILERELHELHLASGRKTVHALPF-----M------GSALAKISDS-KQL-IA-S---DD-------G-- 110 (326)
T ss_dssp ETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSS-----C------EEEEEEEETT-EEE-EE-E---TT-------E--
T ss_pred eCCCCEEEEEECCCCEEEEEECCCCcEEEEECCC-----c------ceEEEEeCCC-eEE-EE-E---CC-------C--
Confidence 3334656555544457899999988765543211 1 3455566542 222 22 1 11 2
Q ss_pred EEEEEcCCCceeecccCCcccccccCCCCCcceEECceEEEEEccC---CCcCEEEEEECCCcceeEecCCCCCCCCCCe
Q 037345 181 VILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRICYWIAWRY---NNCQEILSFHMRDEAFHVIKCPDNSYFPNPI 257 (357)
Q Consensus 181 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~---~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~ 257 (357)
+.+|+..+++.+.+..... ..+.... ..-.+.-+|.+|.-.... .....|..+| +.+...+.- ..... ..
T Consensus 111 l~~~d~~~g~~~~~~~~~~-~~~~~~~-~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~-~~ 183 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELES-DLPGNRS-NDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIP-NS 183 (326)
T ss_dssp EEEEETTTCCEEEEECSST-TCTTEEE-EEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSE-EE
T ss_pred EEEEECCCCcEEEEeeCCC-CCCCCCC-CCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCccc-CC
Confidence 3488888888765532211 0110000 011122367765543211 0134788888 455544321 00000 12
Q ss_pred EEE-ECCe-EEEEEecCCCCeEEEEEEc--CC-eeE--EE-EEEccCCceeEEEEEeeCCcEEEEee-CCeEEEEECCCC
Q 037345 258 LGV-YDNS-LHFLDFDRSESCFEKWVMK--EG-SWT--KQ-LSVGPILGVLRALEFWKNGSFFIESN-TNQLLLYDPNTR 328 (357)
Q Consensus 258 l~~-~~g~-L~l~~~~~~~~~~~iW~l~--~~-~W~--~~-~~i~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~ 328 (357)
+.. .+|+ |+++.. ....+.+|-++ ++ .-. +. ..+........-+.+..+|.+++... ++.+..||++++
T Consensus 184 i~~s~dg~~lyv~~~--~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDT--KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp EEECTTSCEEEEEET--TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCC
T ss_pred eEEcCCCCEEEEEEC--CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCC
Confidence 222 2564 555443 34556666554 23 221 11 12221112233344445677877654 578999999877
Q ss_pred cEEEeeecCCcEEEEEe
Q 037345 329 ALRDVGLGTDGLFLHRY 345 (357)
Q Consensus 329 ~~~~v~~~~~~~~~~~y 345 (357)
.++.+.++........+
T Consensus 262 ~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 262 HIARYEVPGKQTTCPAF 278 (326)
T ss_dssp EEEEEECSCSBEEEEEE
T ss_pred EEEEEECCCCCcEEEEE
Confidence 77777665333433333
No 202
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=26.50 E-value=3.3e+02 Score=23.92 Aligned_cols=51 Identities=16% Similarity=0.273 Sum_probs=32.8
Q ss_pred CceEEEEEccCCCcCEEEEEECCCcceeEe-cCCCCCCCCCCeEEEECCeEEEEEe
Q 037345 216 DRICYWIAWRYNNCQEILSFHMRDEAFHVI-KCPDNSYFPNPILGVYDNSLHFLDF 270 (357)
Q Consensus 216 ~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~l~~~ 270 (357)
+|.|||.... ...|.++|++...-..+ ..+.... .-..+.+.++.|+.+..
T Consensus 257 ~~~lY~aD~~---~~~I~~~d~dG~~~~~~~~~~~~l~-~P~gl~v~~~~lywtd~ 308 (400)
T 3p5b_L 257 SGRLYWVDSK---LHSISSIDVNGGNRKTILEDEKRLA-HPFSLAVFEDKVFWTDI 308 (400)
T ss_dssp TTEEEEEETT---TTEEEEEETTSCCCEEEEECSSTTS-SEEEEEEETTEEEEEES
T ss_pred CCEEEEEECC---CCEEEEEeCCCCccEEEEeCCCCCC-CCEEEEEeCCEEEEecC
Confidence 5899999754 36899999987655443 3222221 11356667888888774
No 203
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=26.13 E-value=4.2e+02 Score=25.04 Aligned_cols=109 Identities=9% Similarity=0.103 Sum_probs=58.1
Q ss_pred ECceEEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCCCCeEEEE--CCeEEEEEecCCCCeEEEEEEcCCeeEEEEE
Q 037345 215 LDRICYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFPNPILGVY--DNSLHFLDFDRSESCFEKWVMKEGSWTKQLS 292 (357)
Q Consensus 215 ~~G~lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~ 292 (357)
.+|.|||.... ...|.++++++..-..+--. ..... ..+++. +|.|+..... ....++.--|+... .. .
T Consensus 402 ~~~~lY~tD~~---~~~I~v~~~~G~~~~~l~~~-~l~~P-~~iavdp~~G~ly~tD~g-~~~~I~r~~~dG~~-~~--~ 472 (619)
T 3s94_A 402 VARNLYWTDTG---TDRIEVTRLNGTMRKILISE-DLEEP-RAIVLDPMVGYMYWTDWG-EIPKIERAALDGSD-RV--V 472 (619)
T ss_dssp TTTEEEEEETT---TTEEEEEETTSCSCEEEECT-TCCSE-EEEEEETTTTEEEEEECS-SSCEEEEEETTSCS-CE--E
T ss_pred ccCcEEEEeCC---CCcEEEEeCCCCeEEEEEEC-CCCCe-eeEEEEcCCCcEEEecCC-CCCEEEEEccCCCc-cE--E
Confidence 46899998754 36899999987654433211 11111 234444 5888887753 22344444444311 11 1
Q ss_pred EccCCceeEEEEEe--e-CCcEEEEee-CCeEEEEECCCCcEEEe
Q 037345 293 VGPILGVLRALEFW--K-NGSFFIESN-TNQLLLYDPNTRALRDV 333 (357)
Q Consensus 293 i~~~~~~~~~~~~~--~-~~~i~~~~~-~~~~~~yd~~t~~~~~v 333 (357)
+. ...+..|.++. . ++.||+... .+++..+|++....+.+
T Consensus 473 l~-~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~ 516 (619)
T 3s94_A 473 LV-NTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVL 516 (619)
T ss_dssp EE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE
T ss_pred EE-eCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 11 11234555543 2 456666654 35688888876665555
No 204
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=25.66 E-value=2.8e+02 Score=22.72 Aligned_cols=97 Identities=15% Similarity=0.195 Sum_probs=54.1
Q ss_pred CEEEEEECCCccee-EecCCCCCCCCCCe-EEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEe
Q 037345 230 QEILSFHMRDEAFH-VIKCPDNSYFPNPI-LGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFW 306 (357)
Q Consensus 230 ~~i~~fD~~~e~~~-~i~lP~~~~~~~~~-l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 306 (357)
..|..+|+.+.+.. .+.. .. .... +.. .+|++.+++. ....+.+|-+....-.... ..........+.+.
T Consensus 129 ~~i~iwd~~~~~~~~~~~~--~~--~~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~ 201 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKTLPA--HS--DPVSAVHFNRDGSLIVSSS--YDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFS 201 (312)
T ss_dssp SCEEEEETTTCCEEEEECC--CS--SCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEE-CCSSCCCEEEEEEC
T ss_pred CcEEEEECCCCEEEEEecC--CC--CcEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCceeeEE-eccCCCceEEEEEC
Confidence 47888888876543 2221 11 1111 222 2566555554 4678999988763222211 11112223445666
Q ss_pred eCCcEEEEe-eCCeEEEEECCCCcEEEe
Q 037345 307 KNGSFFIES-NTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 307 ~~~~i~~~~-~~~~~~~yd~~t~~~~~v 333 (357)
.++..++.. .++.+..||+++++....
T Consensus 202 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 229 (312)
T 4ery_A 202 PNGKYILAATLDNTLKLWDYSKGKCLKT 229 (312)
T ss_dssp TTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 677766654 478899999998876543
No 205
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=24.80 E-value=3.1e+02 Score=22.99 Aligned_cols=68 Identities=16% Similarity=0.190 Sum_probs=39.7
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCe----e-EEEEEEccCCceeEEEEEeeCCcEEEEe-eCCeEEEEECCCCcEE
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKEGS----W-TKQLSVGPILGVLRALEFWKNGSFFIES-NTNQLLLYDPNTRALR 331 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~~~----W-~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 331 (357)
+|.+.+.+. .+..+.||-+...+ - .....+........-+.+..++.+++.. .++.+..||+++++..
T Consensus 38 d~~~l~sgs--~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~ 111 (343)
T 2xzm_R 38 DSPVLISGS--RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY 111 (343)
T ss_dssp CCCEEEEEE--TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE
T ss_pred CCCEEEEEc--CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 455554444 46789999987511 1 1222332222223445555667766654 4788999999987654
No 206
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=24.46 E-value=3.4e+02 Score=23.36 Aligned_cols=197 Identities=10% Similarity=0.089 Sum_probs=93.0
Q ss_pred EecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCcce
Q 037345 100 LGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSVST 179 (357)
Q Consensus 100 ~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 179 (357)
.-+.+|-.++.......+.|||..+++....-.... . ....+.+.+.. .+ ++. ...+ ..+
T Consensus 130 ~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~----~-----~v~~~~~~p~~-~~-l~s--~s~d-------~~v 189 (393)
T 1erj_A 130 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHE----Q-----DIYSLDYFPSG-DK-LVS--GSGD-------RTV 189 (393)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS----S-----CEEEEEECTTS-SE-EEE--EETT-------SEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCC----C-----CEEEEEEcCCC-CE-EEE--ecCC-------CcE
Confidence 344567666555444578999998887543221111 1 14556666543 22 221 1222 244
Q ss_pred EEEEEEcCCCceeecccCCcccccccCCCCCcceEE---CceEEEEEccCCCcCEEEEEECCCccee-EecCCCCC---C
Q 037345 180 EVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYL---DRICYWIAWRYNNCQEILSFHMRDEAFH-VIKCPDNS---Y 252 (357)
Q Consensus 180 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~i~~fD~~~e~~~-~i~lP~~~---~ 252 (357)
. +++.+++.-...-.... . ...+.+ +|.+...... ...|..+|+.+.... .+..+... +
T Consensus 190 ~--iwd~~~~~~~~~~~~~~-~--------v~~~~~~~~~~~~l~~~s~---d~~v~iwd~~~~~~~~~~~~~~~~~~~h 255 (393)
T 1erj_A 190 R--IWDLRTGQCSLTLSIED-G--------VTTVAVSPGDGKYIAAGSL---DRAVRVWDSETGFLVERLDSENESGTGH 255 (393)
T ss_dssp E--EEETTTTEEEEEEECSS-C--------EEEEEECSTTCCEEEEEET---TSCEEEEETTTCCEEEEEC------CCC
T ss_pred E--EEECCCCeeEEEEEcCC-C--------cEEEEEECCCCCEEEEEcC---CCcEEEEECCCCcEEEeecccccCCCCC
Confidence 4 88888765432111000 0 111111 4444333332 247888898876543 23322211 1
Q ss_pred CCCCe-EEE-ECCeEEEEEecCCCCeEEEEEEcC-Ce---------eEEEEEEccCCceeEEEEEeeCCcEEEEe-eCCe
Q 037345 253 FPNPI-LGV-YDNSLHFLDFDRSESCFEKWVMKE-GS---------WTKQLSVGPILGVLRALEFWKNGSFFIES-NTNQ 319 (357)
Q Consensus 253 ~~~~~-l~~-~~g~L~l~~~~~~~~~~~iW~l~~-~~---------W~~~~~i~~~~~~~~~~~~~~~~~i~~~~-~~~~ 319 (357)
..... +.. -+|++.+.+. .+..+.||-++. .. -.....+........-+.+..++..++.. .++.
T Consensus 256 ~~~v~~v~~~~~g~~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~ 333 (393)
T 1erj_A 256 KDSVYSVVFTRDGQSVVSGS--LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 333 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEE--TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE
T ss_pred CCCEEEEEECCCCCEEEEEe--CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe
Confidence 11112 222 2566555444 468999999876 10 01111111111122334455566665543 4788
Q ss_pred EEEEECCCCcEEE
Q 037345 320 LLLYDPNTRALRD 332 (357)
Q Consensus 320 ~~~yd~~t~~~~~ 332 (357)
+..||+++++...
T Consensus 334 v~iwd~~~~~~~~ 346 (393)
T 1erj_A 334 VLFWDKKSGNPLL 346 (393)
T ss_dssp EEEEETTTCCEEE
T ss_pred EEEEECCCCeEEE
Confidence 9999999887644
No 207
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=24.12 E-value=3.1e+02 Score=22.83 Aligned_cols=97 Identities=12% Similarity=0.175 Sum_probs=54.8
Q ss_pred CEEEEEECCCcceeE-ecCCCCCCCCCCeEEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEee
Q 037345 230 QEILSFHMRDEAFHV-IKCPDNSYFPNPILGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWK 307 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 307 (357)
..|..+|+.+.+... +.. .. ..-..+.. -+|++.+.+. .+..+.||-++... ....+........-+.+..
T Consensus 186 g~i~iwd~~~~~~~~~~~~--h~-~~v~~l~~spd~~~l~s~s--~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~sp 258 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEG--HA-MPIRSLTFSPDSQLLVTAS--DDGYIKIYDVQHAN--LAGTLSGHASWVLNVAFCP 258 (321)
T ss_dssp SCEEEEETTTTEEEEEECC--CS-SCCCEEEECTTSCEEEEEC--TTSCEEEEETTTCC--EEEEECCCSSCEEEEEECT
T ss_pred CeEEEEECCCCcEEEEEcc--cC-CceeEEEEcCCCCEEEEEc--CCCeEEEEECCCcc--eeEEEcCCCCceEEEEECC
Confidence 478888988765432 221 11 11012332 2566554444 46789999887632 2233332222234455566
Q ss_pred CCcEEEE-eeCCeEEEEECCCCcEEEe
Q 037345 308 NGSFFIE-SNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 308 ~~~i~~~-~~~~~~~~yd~~t~~~~~v 333 (357)
++..++. ..++.+..||+++++....
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~~ 285 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVHT 285 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEE
Confidence 6776555 4478899999998876543
No 208
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=23.32 E-value=3.5e+02 Score=23.09 Aligned_cols=67 Identities=7% Similarity=0.068 Sum_probs=40.2
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcEE
Q 037345 262 DNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESNTNQLLLYDPNTRALR 331 (357)
Q Consensus 262 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~ 331 (357)
+|++.++........+.||-++... .+..+..... ..-+.+..+|.++....++.+..++..+++..
T Consensus 144 Dg~~la~as~~~d~~i~iwd~~~~~--~~~~~~~~~~-V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 144 EGTVAAIASSKVPAIMRIIDPSDLT--EKFEIETRGE-VKDLHFSTDGKVVAYITGSSLEVISTVTGSCI 210 (365)
T ss_dssp TSSCEEEEESCSSCEEEEEETTTTE--EEEEEECSSC-CCEEEECTTSSEEEEECSSCEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCCEEEEeECCCCc--EEEEeCCCCc-eEEEEEccCCceEEeccceeEEEEEeccCcce
Confidence 6775444433356789999888743 2333443222 33456667788777666666777777666543
No 209
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=23.12 E-value=5.9e+02 Score=25.64 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=26.6
Q ss_pred EEEEEeeCCcEEEEeeCCeEEEEECCCCc--EEEeeec
Q 037345 301 RALEFWKNGSFFIESNTNQLLLYDPNTRA--LRDVGLG 336 (357)
Q Consensus 301 ~~~~~~~~~~i~~~~~~~~~~~yd~~t~~--~~~v~~~ 336 (357)
..+.+..+|+.++...++.+..+|+++++ .+++.+.
T Consensus 611 ~~~~~S~DG~~l~~~~~~~i~~~d~~~~~~~~~~~~~~ 648 (1045)
T 1k32_A 611 TDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETD 648 (1045)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCCC
T ss_pred ceEEECCCCCEEEEEcCCcEEEEeCccCcccCCccccc
Confidence 34566778887776666789999999988 6666663
No 210
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=22.85 E-value=65 Score=18.07 Aligned_cols=17 Identities=18% Similarity=0.382 Sum_probs=13.7
Q ss_pred eeCCeEEEEECCCCcEE
Q 037345 315 SNTNQLLLYDPNTRALR 331 (357)
Q Consensus 315 ~~~~~~~~yd~~t~~~~ 331 (357)
..+++.++||..|++-.
T Consensus 17 ~~~G~~YYyN~~T~eS~ 33 (40)
T 2ysi_A 17 TPDGKVYYYNARTRESA 33 (40)
T ss_dssp CTTSCEEEEETTTCCEE
T ss_pred CCCCCEEEEECCCCCEE
Confidence 34788999999998754
No 211
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=22.50 E-value=3.4e+02 Score=22.69 Aligned_cols=95 Identities=14% Similarity=0.180 Sum_probs=53.8
Q ss_pred CEEEEEECCCcceeEecCCCCCCCCCC-eEEE-ECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEee
Q 037345 230 QEILSFHMRDEAFHVIKCPDNSYFPNP-ILGV-YDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWK 307 (357)
Q Consensus 230 ~~i~~fD~~~e~~~~i~lP~~~~~~~~-~l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 307 (357)
..|..+|+.+.+.... +... .... .+.. .+|++.+.+. .+..+.||-++... ....+........-+.+..
T Consensus 164 ~~i~~wd~~~~~~~~~-~~~h--~~~v~~~~~~~~~~~l~sg~--~d~~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~p 236 (340)
T 1got_B 164 TTCALWDIETGQQTTT-FTGH--TGDVMSLSLAPDTRLFVSGA--CDASAKLWDVREGM--CRQTFTGHESDINAICFFP 236 (340)
T ss_dssp SCEEEEETTTTEEEEE-ECCC--SSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCS--EEEEECCCSSCEEEEEECT
T ss_pred CcEEEEECCCCcEEEE-EcCC--CCceEEEEECCCCCEEEEEe--CCCcEEEEECCCCe--eEEEEcCCcCCEEEEEEcC
Confidence 4788889887654322 1111 1111 2222 2566655555 46789999887632 2233332222344556666
Q ss_pred CCcEEEEe-eCCeEEEEECCCCcEE
Q 037345 308 NGSFFIES-NTNQLLLYDPNTRALR 331 (357)
Q Consensus 308 ~~~i~~~~-~~~~~~~yd~~t~~~~ 331 (357)
++..++.. .++.+..||+++++..
T Consensus 237 ~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 237 NGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 77766654 4778999999887643
No 212
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=22.18 E-value=75 Score=23.23 Aligned_cols=40 Identities=8% Similarity=-0.042 Sum_probs=24.9
Q ss_pred eEEEEeccccchhcCCCCCCCCCCccccccceeEEe--e---eCCCCCeEEEEEE
Q 037345 116 RISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFE--L---DSSSNDYKIIFIL 165 (357)
Q Consensus 116 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg--~---d~~~~~ykvv~~~ 165 (357)
.+++.||.|+.|...-... . +...+. + |...+.|+|+...
T Consensus 21 ~Vm~~D~~~~~W~p~~~g~--l--------s~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 21 VVMTRDDSSGGWFPQEGGG--I--------SRVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEECTTSSSSEECSCCS--C--------EEEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEeeEcCCCCCEeeCCCCC--c--------ccEEEEEecCCCCCCCCEEEEEEEE
Confidence 6789999999886443321 1 022333 3 5566789988865
No 213
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=21.97 E-value=3.7e+02 Score=22.83 Aligned_cols=91 Identities=7% Similarity=-0.037 Sum_probs=46.5
Q ss_pred CEEEEEECCCccee-EecCCCCCCCCCCeEEE-ECCe-EEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEe
Q 037345 230 QEILSFHMRDEAFH-VIKCPDNSYFPNPILGV-YDNS-LHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFW 306 (357)
Q Consensus 230 ~~i~~fD~~~e~~~-~i~lP~~~~~~~~~l~~-~~g~-L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 306 (357)
..|..+|+.+.+-. .+..... .-..+.. .+|. +.+.+. .+..+.||-++..+ ....+.... ...-+++.
T Consensus 249 ~~i~~wd~~~~~~~~~~~~~~~---~v~~l~~sp~~~~~lasgs--~D~~i~iwd~~~~~--~~~~~~H~~-~V~~vafs 320 (357)
T 4g56_B 249 GNVSLVNIKNPDSAQTSAVHSQ---NITGLAYSYHSSPFLASIS--EDCTVAVLDADFSE--VFRDLSHRD-FVTGVAWS 320 (357)
T ss_dssp SCEEEEESSCGGGCEEECCCSS---CEEEEEECSSSSCCEEEEE--TTSCEEEECTTSCE--EEEECCCSS-CEEEEEEC
T ss_pred cceeEEECCCCcEeEEEeccce---eEEEEEEcCCCCCEEEEEe--CCCEEEEEECCCCc--EeEECCCCC-CEEEEEEe
Confidence 46788888776532 2222111 1012222 2453 433333 46789999766532 222333222 23445555
Q ss_pred e-CCcEEEE-eeCCeEEEEECCCC
Q 037345 307 K-NGSFFIE-SNTNQLLLYDPNTR 328 (357)
Q Consensus 307 ~-~~~i~~~-~~~~~~~~yd~~t~ 328 (357)
. ++.+++. ..|+.+..||+.++
T Consensus 321 P~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 321 PLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCCCEEEEEcCCCeEEEEECCCC
Confidence 3 5666654 45889999998654
No 214
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=21.76 E-value=5.1e+02 Score=24.42 Aligned_cols=200 Identities=10% Similarity=0.140 Sum_probs=0.0
Q ss_pred eEEecccceEEEeecCCCeEEEEeccccchhcCCCCCCCCCCccccccceeEEeeeCCCCCeEEEEEEEecCCCCCCCCc
Q 037345 98 ELLGNCNGLFCLHDKNSNRISIWNLATREFRALPKWKGEIPRHKWVYQLNFGFELDSSSNDYKIIFILNLTDDNTRKDSV 177 (357)
Q Consensus 98 ~~~~s~~GLll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~lg~d~~~~~ykvv~~~~~~~~~~~~~~~ 177 (357)
.+.-+.+|-+++.......+.|||..+++....-...... ...+.+.+..+.. +....++
T Consensus 435 ~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~---------v~~~~~s~~~~~l----~s~s~D~------- 494 (694)
T 3dm0_A 435 DVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD---------VLSVAFSLDNRQI----VSASRDR------- 494 (694)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC---------EEEEEECTTSSCE----EEEETTS-------
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC---------EEEEEEeCCCCEE----EEEeCCC-------
Q ss_pred ceEEEEEEcCCCceeecccCCcccccccCCCCCcceEECce---EEEEEccCCCcCEEEEEECCCcceeEecCCCCCCCC
Q 037345 178 STEVILHTLSTDSWRYLKANELSDYSFLGGQQSENTYLDRI---CYWIAWRYNNCQEILSFHMRDEAFHVIKCPDNSYFP 254 (357)
Q Consensus 178 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~~v~~~G~---lyw~~~~~~~~~~i~~fD~~~e~~~~i~lP~~~~~~ 254 (357)
.+. +++..+..=..+......+... ..++..... -+...... ...|..+|+.+.+....-.... ..-
T Consensus 495 ~i~--iwd~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~~l~s~s~--d~~v~vwd~~~~~~~~~~~~h~-~~v 564 (694)
T 3dm0_A 495 TIK--LWNTLGECKYTISEGGEGHRDW-----VSCVRFSPNTLQPTIVSASW--DKTVKVWNLSNCKLRSTLAGHT-GYV 564 (694)
T ss_dssp CEE--EECTTSCEEEEECSSTTSCSSC-----EEEEEECSCSSSCEEEEEET--TSCEEEEETTTCCEEEEECCCS-SCE
T ss_pred EEE--EEECCCCcceeeccCCCCCCCc-----EEEEEEeCCCCcceEEEEeC--CCeEEEEECCCCcEEEEEcCCC-CCE
Q ss_pred CCeEEEECCeEEEEEecCCCCeEEEEEEcCCeeEEEEEEccCCceeEEEEEeeCCcEEEEeeCCeEEEEECCCCcEEE
Q 037345 255 NPILGVYDNSLHFLDFDRSESCFEKWVMKEGSWTKQLSVGPILGVLRALEFWKNGSFFIESNTNQLLLYDPNTRALRD 332 (357)
Q Consensus 255 ~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~ 332 (357)
......-+|++.+.+. .+..+.||-+....-......... ..-+.+..++.++....+..+..||+++++...
T Consensus 565 ~~v~~spdg~~l~sg~--~Dg~i~iwd~~~~~~~~~~~~~~~---v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 565 STVAVSPDGSLCASGG--KDGVVLLWDLAEGKKLYSLEANSV---IHALCFSPNRYWLCAATEHGIKIWDLESKSIVE 637 (694)
T ss_dssp EEEEECTTSSEEEEEE--TTSBCEEEETTTTEEEECCBCSSC---EEEEEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCEEEEEe--CCCeEEEEECCCCceEEEecCCCc---EEEEEEcCCCcEEEEEcCCCEEEEECCCCCChh
No 215
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=20.72 E-value=4.1e+02 Score=22.96 Aligned_cols=27 Identities=4% Similarity=0.039 Sum_probs=21.7
Q ss_pred eCCcEEEEeeCCeEEEEECCCCcEEEe
Q 037345 307 KNGSFFIESNTNQLLLYDPNTRALRDV 333 (357)
Q Consensus 307 ~~~~i~~~~~~~~~~~yd~~t~~~~~v 333 (357)
.+|.+|+-..+++++..|++|++...-
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 355667767789999999999998776
No 216
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=20.35 E-value=89 Score=15.78 Aligned_cols=17 Identities=12% Similarity=0.296 Sum_probs=13.1
Q ss_pred eeCCeEEEEECCCCcEE
Q 037345 315 SNTNQLLLYDPNTRALR 331 (357)
Q Consensus 315 ~~~~~~~~yd~~t~~~~ 331 (357)
...++.++||..|++-.
T Consensus 7 ~~~g~~YYyN~~T~~s~ 23 (27)
T 1e0n_A 7 HENGRPLYYNAEQKTKL 23 (27)
T ss_dssp ESSSSEEEEETTTTEEE
T ss_pred CCCCCeEEEECCCCCEe
Confidence 44678999999998743
Done!