Query 037346
Match_columns 1156
No_of_seqs 649 out of 4786
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 11:19:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037346.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037346hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 4E-217 8E-222 2011.8 119.8 1136 3-1154 123-1378(1381)
2 PLN03130 ABC transporter C fam 100.0 8E-176 2E-180 1738.1 132.5 1130 2-1153 226-1476(1622)
3 PLN03232 ABC transporter C fam 100.0 2E-172 3E-177 1709.9 132.9 1128 2-1154 226-1474(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 8E-170 2E-174 1685.9 133.5 1141 2-1151 201-1520(1522)
5 TIGR01271 CFTR_protein cystic 100.0 2E-165 5E-170 1638.1 129.8 1138 2-1154 3-1455(1490)
6 PTZ00243 ABC transporter; Prov 100.0 2E-157 4E-162 1561.6 129.2 1140 2-1153 59-1548(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 9E-143 2E-147 1307.7 90.1 1006 125-1152 89-1226(1228)
8 PTZ00265 multidrug resistance 100.0 1E-124 3E-129 1236.5 113.9 1072 71-1151 50-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 6.3E-78 1.4E-82 700.3 45.4 434 712-1154 215-707 (716)
10 KOG0058 Peptide exporter, ABC 100.0 6.9E-76 1.5E-80 683.3 55.4 508 72-581 138-705 (716)
11 COG2274 SunT ABC-type bacterio 100.0 1.8E-69 3.8E-74 659.0 63.3 527 49-579 112-707 (709)
12 PRK11174 cysteine/glutathione 100.0 3.7E-69 8.1E-74 668.1 64.8 507 69-580 10-584 (588)
13 COG2274 SunT ABC-type bacterio 100.0 5.1E-70 1.1E-74 663.7 50.3 476 666-1151 157-708 (709)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7.3E-67 1.6E-71 657.3 65.3 504 70-578 125-683 (686)
15 KOG0055 Multidrug/pheromone ex 100.0 3E-67 6.6E-72 643.7 59.6 503 75-580 658-1225(1228)
16 TIGR00958 3a01208 Conjugate Tr 100.0 5.4E-67 1.2E-71 657.5 62.7 501 74-576 154-710 (711)
17 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.4E-66 9.5E-71 653.3 64.5 506 70-577 143-709 (710)
18 TIGR01193 bacteriocin_ABC ABC- 100.0 8.5E-66 1.8E-70 649.9 64.9 504 71-577 146-706 (708)
19 TIGR03375 type_I_sec_LssB type 100.0 1.1E-65 2.4E-70 647.4 65.0 498 69-569 135-689 (694)
20 PRK11176 lipid transporter ATP 100.0 1.1E-64 2.5E-69 627.7 63.8 505 72-579 16-578 (582)
21 COG1132 MdlB ABC-type multidru 100.0 1.8E-65 3.9E-70 631.5 50.8 431 712-1153 79-566 (567)
22 PRK10790 putative multidrug tr 100.0 1.5E-63 3.2E-68 618.1 67.5 503 72-581 14-576 (592)
23 TIGR02203 MsbA_lipidA lipid A 100.0 1.8E-63 4E-68 616.4 64.6 504 72-578 5-566 (571)
24 PRK13657 cyclic beta-1,2-gluca 100.0 3E-63 6.6E-68 614.3 65.1 505 74-580 12-570 (588)
25 PRK11160 cysteine/glutathione 100.0 4E-63 8.7E-68 609.2 63.7 501 74-578 9-572 (574)
26 COG4988 CydD ABC-type transpor 100.0 4.2E-63 9.2E-68 567.2 59.0 492 85-581 4-556 (559)
27 COG1132 MdlB ABC-type multidru 100.0 3.7E-63 8.1E-68 610.9 63.3 501 74-580 9-564 (567)
28 PRK11174 cysteine/glutathione 100.0 2.2E-64 4.9E-69 625.4 51.2 432 712-1153 90-586 (588)
29 TIGR01846 type_I_sec_HlyB type 100.0 1.2E-62 2.6E-67 619.2 65.6 508 69-579 127-691 (694)
30 TIGR02204 MsbA_rel ABC transpo 100.0 9.9E-63 2.1E-67 610.1 63.8 509 70-578 7-573 (576)
31 KOG0056 Heavy metal exporter H 100.0 9.7E-65 2.1E-69 553.9 35.8 430 714-1152 288-775 (790)
32 TIGR02868 CydC thiol reductant 100.0 1.7E-62 3.6E-67 601.1 60.1 466 73-540 5-529 (529)
33 TIGR01192 chvA glucan exporter 100.0 7.5E-62 1.6E-66 598.6 65.9 504 74-580 12-570 (585)
34 PRK10789 putative multidrug tr 100.0 6.5E-62 1.4E-66 598.5 62.7 489 89-580 3-550 (569)
35 PTZ00265 multidrug resistance 100.0 3.7E-62 8E-67 644.7 63.8 505 75-579 819-1464(1466)
36 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 9.4E-63 2E-67 620.1 53.1 426 712-1151 203-685 (686)
37 TIGR00958 3a01208 Conjugate Tr 100.0 6.3E-63 1.4E-67 620.7 49.7 425 712-1148 228-711 (711)
38 TIGR01193 bacteriocin_ABC ABC- 100.0 1.2E-62 2.6E-67 621.2 50.5 427 712-1149 223-707 (708)
39 COG1123 ATPase components of v 100.0 4.3E-63 9.4E-68 570.7 40.1 464 357-1150 5-531 (539)
40 TIGR01842 type_I_sec_PrtD type 100.0 7.3E-61 1.6E-65 587.1 61.1 482 78-568 3-542 (544)
41 PRK10790 putative multidrug tr 100.0 8.9E-62 1.9E-66 602.2 53.0 431 712-1154 92-578 (592)
42 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.2E-62 1.4E-66 615.5 51.1 428 712-1148 221-709 (710)
43 PRK11160 cysteine/glutathione 100.0 1.7E-61 3.8E-66 594.7 51.7 428 712-1150 87-573 (574)
44 COG4988 CydD ABC-type transpor 100.0 1.7E-61 3.7E-66 554.0 46.8 430 712-1153 67-557 (559)
45 TIGR02857 CydD thiol reductant 100.0 4.3E-60 9.3E-65 579.8 58.9 470 80-552 2-529 (529)
46 PRK10261 glutathione transport 100.0 6.3E-62 1.4E-66 601.4 40.6 482 356-1149 11-565 (623)
47 KOG0057 Mitochondrial Fe/S clu 100.0 4.5E-60 9.7E-65 531.9 50.6 483 89-578 38-584 (591)
48 PRK11176 lipid transporter ATP 100.0 1.6E-60 3.4E-65 590.8 51.9 431 712-1153 92-581 (582)
49 COG4987 CydC ABC-type transpor 100.0 2.7E-59 5.8E-64 525.6 55.0 502 71-578 7-571 (573)
50 TIGR03375 type_I_sec_LssB type 100.0 1.7E-60 3.7E-65 600.3 50.8 418 712-1139 214-689 (694)
51 PRK15134 microcin C ABC transp 100.0 2E-61 4.4E-66 589.5 40.0 449 357-1141 5-518 (529)
52 COG5265 ATM1 ABC-type transpor 100.0 1.4E-61 3E-66 526.5 32.6 429 712-1149 9-496 (497)
53 TIGR00957 MRP_assoc_pro multi 100.0 9E-59 1.9E-63 620.0 66.0 509 69-579 952-1519(1522)
54 TIGR01846 type_I_sec_HlyB type 100.0 8.7E-60 1.9E-64 593.3 52.6 429 712-1151 206-692 (694)
55 PRK10762 D-ribose transporter 100.0 4E-61 8.7E-66 583.1 37.2 423 357-1137 4-483 (501)
56 PRK15439 autoinducer 2 ABC tra 100.0 3E-61 6.5E-66 584.4 35.8 436 357-1138 11-492 (510)
57 PRK13549 xylose transporter AT 100.0 3.7E-61 8E-66 584.1 36.2 430 357-1137 5-493 (506)
58 PRK09700 D-allose transporter 100.0 4.4E-61 9.5E-66 584.5 36.7 428 357-1135 5-495 (510)
59 COG4987 CydC ABC-type transpor 100.0 1.9E-59 4.1E-64 526.8 44.9 426 712-1149 85-571 (573)
60 TIGR03269 met_CoM_red_A2 methy 100.0 9.1E-61 2E-65 583.1 36.7 424 358-1138 1-517 (520)
61 PLN03130 ABC transporter C fam 100.0 7.5E-58 1.6E-62 609.4 64.8 510 69-580 901-1474(1622)
62 KOG0056 Heavy metal exporter H 100.0 9.2E-61 2E-65 522.7 29.6 497 83-581 217-775 (790)
63 TIGR02203 MsbA_lipidA lipid A 100.0 9.9E-59 2.1E-63 574.1 51.7 430 712-1152 81-569 (571)
64 PRK11288 araG L-arabinose tran 100.0 3E-60 6.4E-65 575.5 35.0 425 357-1137 4-484 (501)
65 PTZ00243 ABC transporter; Prov 100.0 2.7E-57 5.9E-62 603.5 64.4 441 139-580 1026-1546(1560)
66 PRK15064 ABC transporter ATP-b 100.0 6.6E-59 1.4E-63 567.6 44.5 450 358-1139 2-526 (530)
67 PRK13657 cyclic beta-1,2-gluca 100.0 5.1E-58 1.1E-62 567.7 52.3 426 718-1152 89-571 (588)
68 TIGR02633 xylG D-xylose ABC tr 100.0 1E-59 2.2E-64 571.6 35.3 429 358-1136 2-490 (500)
69 PLN03232 ABC transporter C fam 100.0 5.9E-57 1.3E-61 601.7 63.6 444 135-579 974-1470(1495)
70 TIGR01192 chvA glucan exporter 100.0 1.1E-57 2.4E-62 561.7 51.6 428 715-1152 86-571 (585)
71 KOG0057 Mitochondrial Fe/S clu 100.0 4.2E-58 9.1E-63 516.0 41.9 431 712-1154 101-589 (591)
72 PRK10789 putative multidrug tr 100.0 1.6E-57 3.5E-62 559.5 50.2 431 712-1153 63-552 (569)
73 TIGR02204 MsbA_rel ABC transpo 100.0 3.6E-57 7.7E-62 560.5 51.6 432 712-1151 85-575 (576)
74 PRK10938 putative molybdenum t 100.0 1.2E-58 2.5E-63 561.0 36.7 431 357-1132 3-486 (490)
75 TIGR01194 cyc_pep_trnsptr cycl 100.0 3.8E-56 8.2E-61 545.3 57.3 481 73-560 9-551 (555)
76 COG4172 ABC-type uncharacteriz 100.0 3.8E-58 8.3E-63 495.3 34.5 456 356-1147 5-525 (534)
77 PRK10982 galactose/methyl gala 100.0 1.8E-58 3.9E-63 559.1 35.9 423 360-1137 1-479 (491)
78 PRK11819 putative ABC transpor 100.0 3.6E-57 7.9E-62 553.8 46.0 198 356-568 5-250 (556)
79 TIGR02868 CydC thiol reductant 100.0 9.5E-57 2.1E-61 550.3 46.8 392 712-1110 80-529 (529)
80 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.5E-56 3.4E-61 548.4 45.1 206 357-568 4-248 (552)
81 COG4618 ArpD ABC-type protease 100.0 2E-55 4.3E-60 489.1 49.5 490 68-568 10-560 (580)
82 TIGR00956 3a01205 Pleiotropic 100.0 1.8E-56 3.8E-61 590.8 47.2 188 373-567 74-299 (1394)
83 TIGR01257 rim_protein retinal- 100.0 7E-55 1.5E-59 571.3 57.4 201 356-568 927-1149(2272)
84 PRK10636 putative ABC transpor 100.0 7E-56 1.5E-60 547.7 43.7 196 358-567 2-235 (638)
85 TIGR02857 CydD thiol reductant 100.0 2.7E-55 5.8E-60 537.5 47.3 401 712-1122 71-529 (529)
86 TIGR01271 CFTR_protein cystic 100.0 5.9E-54 1.3E-58 571.8 63.0 443 135-581 949-1453(1490)
87 PRK10522 multidrug transporter 100.0 3.8E-53 8.3E-58 518.9 57.0 477 71-560 3-530 (547)
88 PRK11147 ABC transporter ATPas 100.0 3.2E-54 6.8E-59 534.7 45.7 195 357-568 3-243 (635)
89 TIGR01842 type_I_sec_PrtD type 100.0 1.7E-53 3.6E-58 522.2 49.3 410 712-1138 73-542 (544)
90 TIGR01194 cyc_pep_trnsptr cycl 100.0 1E-52 2.2E-57 515.0 50.2 411 712-1130 80-551 (555)
91 COG5265 ATM1 ABC-type transpor 100.0 9.4E-54 2E-58 465.4 35.9 438 138-577 9-495 (497)
92 COG0488 Uup ATPase components 100.0 8.1E-53 1.8E-57 497.5 40.8 460 357-1139 3-526 (530)
93 PLN03073 ABC transporter F fam 100.0 3.4E-52 7.4E-57 515.0 45.2 173 950-1136 525-712 (718)
94 PLN03140 ABC transporter G fam 100.0 3.9E-52 8.5E-57 546.4 45.9 188 373-567 178-426 (1470)
95 TIGR00954 3a01203 Peroxysomal 100.0 1.4E-50 3E-55 502.4 51.9 467 82-554 97-653 (659)
96 PRK13409 putative ATPase RIL; 100.0 4.2E-52 9E-57 506.1 31.5 170 949-1132 354-536 (590)
97 KOG0054 Multidrug resistance-a 100.0 1.5E-49 3.2E-54 500.5 54.0 443 134-577 881-1372(1381)
98 PRK10522 multidrug transporter 100.0 1.2E-49 2.5E-54 488.1 48.3 410 712-1137 75-538 (547)
99 COG1129 MglA ABC-type sugar tr 100.0 7.8E-51 1.7E-55 466.5 33.8 423 356-1134 7-486 (500)
100 COG3845 ABC-type uncharacteriz 100.0 2.5E-48 5.4E-53 434.8 32.3 428 356-1135 3-489 (501)
101 COG4618 ArpD ABC-type protease 100.0 7.8E-46 1.7E-50 412.6 35.1 418 713-1139 91-561 (580)
102 COG1126 GlnQ ABC-type polar am 100.0 3.6E-47 7.7E-52 382.8 19.1 200 357-570 2-227 (240)
103 TIGR00954 3a01203 Peroxysomal 100.0 2.2E-43 4.8E-48 438.0 39.3 391 714-1124 168-653 (659)
104 PRK14257 phosphate ABC transpo 100.0 1.8E-44 4E-49 409.9 24.0 262 291-569 23-314 (329)
105 COG1135 AbcC ABC-type metal io 100.0 6.7E-44 1.4E-48 377.3 18.3 203 357-570 1-233 (339)
106 COG1116 TauB ABC-type nitrate/ 100.0 1.2E-43 2.6E-48 369.8 19.3 185 357-555 3-207 (248)
107 COG1125 OpuBA ABC-type proline 100.0 8.1E-44 1.7E-48 364.8 16.3 199 358-570 2-227 (309)
108 cd03289 ABCC_CFTR2 The CFTR su 100.0 1E-42 2.3E-47 385.6 24.7 220 357-578 2-235 (275)
109 COG1120 FepC ABC-type cobalami 100.0 6.6E-43 1.4E-47 372.5 19.4 199 357-569 2-229 (258)
110 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.1E-42 1.1E-46 363.4 22.0 199 356-569 3-228 (254)
111 COG1127 Ttg2A ABC-type transpo 100.0 1.1E-41 2.4E-46 348.6 22.3 205 355-573 6-240 (263)
112 COG1117 PstB ABC-type phosphat 100.0 1.5E-42 3.2E-47 347.2 15.2 204 356-569 6-238 (253)
113 KOG0927 Predicted transporter 100.0 2.7E-41 5.8E-46 378.6 24.6 172 946-1130 388-587 (614)
114 COG1118 CysA ABC-type sulfate/ 100.0 5.2E-42 1.1E-46 361.7 17.6 200 357-570 2-229 (345)
115 COG3839 MalK ABC-type sugar tr 100.0 1E-41 2.2E-46 377.3 20.4 200 357-570 3-225 (338)
116 COG3840 ThiQ ABC-type thiamine 100.0 9E-42 2E-46 332.2 17.0 196 358-569 2-220 (231)
117 COG3842 PotA ABC-type spermidi 100.0 5.6E-42 1.2E-46 381.3 17.5 201 356-570 4-228 (352)
118 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.6E-41 3.5E-46 376.0 19.7 203 948-1152 18-238 (275)
119 COG1136 SalX ABC-type antimicr 100.0 5.8E-41 1.3E-45 350.7 21.7 191 358-558 2-221 (226)
120 cd03291 ABCC_CFTR1 The CFTR su 100.0 8.6E-40 1.9E-44 363.6 28.3 236 331-574 16-253 (282)
121 cd03252 ABCC_Hemolysin The ABC 100.0 3.7E-40 8.1E-45 361.4 24.8 217 358-575 1-232 (237)
122 COG3638 ABC-type phosphate/pho 100.0 5.4E-41 1.2E-45 342.6 16.7 198 357-567 3-236 (258)
123 cd03250 ABCC_MRP_domain1 Domai 100.0 2.7E-40 5.8E-45 353.8 22.6 199 358-556 1-204 (204)
124 COG1124 DppF ABC-type dipeptid 100.0 2.7E-40 5.9E-45 340.7 20.5 202 357-569 3-232 (252)
125 COG1122 CbiO ABC-type cobalt t 100.0 2.1E-40 4.5E-45 354.5 19.5 200 357-569 3-229 (235)
126 COG2884 FtsE Predicted ATPase 100.0 2E-40 4.3E-45 326.0 17.3 191 358-561 2-219 (223)
127 KOG0062 ATPase component of AB 100.0 1.7E-39 3.7E-44 362.2 25.1 171 945-1129 360-559 (582)
128 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2E-39 4.4E-44 355.8 24.3 213 358-570 1-228 (238)
129 cd03254 ABCC_Glucan_exporter_l 100.0 2E-39 4.4E-44 353.7 24.1 210 357-568 2-226 (229)
130 cd03253 ABCC_ATM1_transporter 100.0 3.8E-39 8.2E-44 353.3 25.1 212 358-571 1-227 (236)
131 cd03251 ABCC_MsbA MsbA is an e 100.0 3.3E-39 7E-44 353.4 24.3 213 358-571 1-228 (234)
132 cd03244 ABCC_MRP_domain2 Domai 100.0 3.2E-39 6.9E-44 350.2 24.0 205 357-562 2-220 (221)
133 cd03288 ABCC_SUR2 The SUR doma 100.0 5.1E-39 1.1E-43 355.9 26.0 214 355-569 17-244 (257)
134 TIGR02314 ABC_MetN D-methionin 100.0 1.4E-39 3.1E-44 370.1 21.5 201 358-569 2-231 (343)
135 PRK11650 ugpC glycerol-3-phosp 100.0 3.7E-39 8.1E-44 370.0 22.8 201 357-570 3-226 (356)
136 cd03245 ABCC_bacteriocin_expor 100.0 1.2E-38 2.6E-43 345.5 23.9 204 357-561 2-220 (220)
137 PRK11432 fbpC ferric transport 100.0 6.1E-39 1.3E-43 367.1 22.5 201 356-570 5-228 (351)
138 cd03261 ABC_Org_Solvent_Resist 100.0 5.9E-39 1.3E-43 351.3 20.9 198 358-569 1-227 (235)
139 PRK13631 cbiO cobalt transport 100.0 1.3E-38 2.8E-43 361.1 23.2 204 356-569 20-266 (320)
140 PRK09452 potA putrescine/sperm 100.0 1.5E-38 3.3E-43 366.0 22.7 201 356-570 13-236 (375)
141 TIGR03265 PhnT2 putative 2-ami 100.0 1.1E-38 2.4E-43 365.7 21.4 200 357-570 4-226 (353)
142 PRK10851 sulfate/thiosulfate t 100.0 2.9E-38 6.3E-43 362.2 22.5 199 357-569 2-227 (353)
143 PRK13637 cbiO cobalt transport 100.0 2.8E-38 6.2E-43 354.8 21.8 203 357-568 2-234 (287)
144 TIGR03258 PhnT 2-aminoethylpho 100.0 2E-38 4.4E-43 363.8 21.0 201 356-570 4-230 (362)
145 PRK13643 cbiO cobalt transport 100.0 2.9E-38 6.3E-43 354.9 21.8 201 358-568 2-233 (288)
146 PRK13650 cbiO cobalt transport 100.0 2.6E-38 5.7E-43 353.9 21.3 202 357-569 4-230 (279)
147 TIGR01186 proV glycine betaine 100.0 1.3E-38 2.9E-43 363.9 19.2 187 372-569 5-220 (363)
148 PRK13634 cbiO cobalt transport 100.0 3.9E-38 8.5E-43 354.2 22.1 202 358-569 3-236 (290)
149 cd03296 ABC_CysA_sulfate_impor 100.0 4.6E-38 9.9E-43 345.0 22.1 198 357-568 2-226 (239)
150 cd03259 ABC_Carb_Solutes_like 100.0 3.1E-38 6.6E-43 340.4 19.5 190 358-561 1-213 (213)
151 PRK11000 maltose/maltodextrin 100.0 4.5E-38 9.8E-43 363.7 22.0 199 357-569 3-224 (369)
152 cd03219 ABC_Mj1267_LivG_branch 100.0 4E-38 8.6E-43 345.2 20.4 197 358-568 1-232 (236)
153 cd03260 ABC_PstB_phosphate_tra 100.0 3.2E-38 7E-43 343.7 19.5 196 358-565 1-226 (227)
154 PRK13647 cbiO cobalt transport 100.0 4.3E-38 9.4E-43 351.2 20.9 197 357-566 4-225 (274)
155 KOG0065 Pleiotropic drug resis 100.0 2.2E-36 4.7E-41 371.2 37.3 190 372-568 127-351 (1391)
156 PRK13537 nodulation ABC transp 100.0 5.7E-38 1.2E-42 354.7 21.8 200 356-569 6-228 (306)
157 PRK13651 cobalt transporter AT 100.0 5.6E-38 1.2E-42 353.8 21.6 203 357-569 2-255 (305)
158 cd03226 ABC_cobalt_CbiO_domain 100.0 5E-38 1.1E-42 336.5 19.6 187 359-558 1-205 (205)
159 PRK13646 cbiO cobalt transport 100.0 6.5E-38 1.4E-42 352.0 21.5 202 357-568 2-235 (286)
160 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.2E-38 1.1E-42 340.3 19.6 195 358-563 1-218 (220)
161 TIGR00960 3a0501s02 Type II (G 100.0 3.9E-38 8.5E-43 340.3 18.6 188 358-557 2-216 (216)
162 PRK11153 metN DL-methionine tr 100.0 6E-38 1.3E-42 359.9 20.9 201 358-569 2-231 (343)
163 PRK11607 potG putrescine trans 100.0 8E-38 1.7E-42 360.8 22.0 201 356-570 18-241 (377)
164 cd03290 ABCC_SUR1_N The SUR do 100.0 1.3E-37 2.9E-42 336.6 22.3 196 359-556 2-218 (218)
165 cd03248 ABCC_TAP TAP, the Tran 100.0 1.3E-37 2.8E-42 338.7 22.4 203 355-557 9-226 (226)
166 cd03265 ABC_DrrA DrrA is the A 100.0 5.6E-38 1.2E-42 340.0 19.2 195 358-566 1-219 (220)
167 PRK14250 phosphate ABC transpo 100.0 1.8E-37 3.9E-42 340.4 23.0 200 357-569 3-222 (241)
168 cd03263 ABC_subfamily_A The AB 100.0 9.8E-38 2.1E-42 338.3 20.3 197 358-566 1-219 (220)
169 TIGR02315 ABC_phnC phosphonate 100.0 1.5E-37 3.2E-42 342.3 21.8 196 358-566 2-233 (243)
170 PRK14242 phosphate transporter 100.0 1.4E-37 3.1E-42 344.3 21.7 204 356-569 5-238 (253)
171 cd03256 ABC_PhnC_transporter A 100.0 1.2E-37 2.6E-42 342.6 20.9 197 358-567 1-233 (241)
172 cd03268 ABC_BcrA_bacitracin_re 100.0 1.3E-37 2.9E-42 334.2 20.5 190 358-561 1-208 (208)
173 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 8.4E-38 1.8E-42 338.4 19.0 189 358-557 1-218 (218)
174 PRK14269 phosphate ABC transpo 100.0 1.4E-37 3E-42 342.5 21.0 202 357-568 2-230 (246)
175 PRK11629 lolD lipoprotein tran 100.0 1.5E-37 3.3E-42 339.5 21.1 195 357-562 5-228 (233)
176 PRK11247 ssuB aliphatic sulfon 100.0 2.2E-37 4.7E-42 341.1 22.4 195 356-564 11-219 (257)
177 PRK09536 btuD corrinoid ABC tr 100.0 1.2E-37 2.6E-42 360.3 21.4 199 357-569 3-229 (402)
178 TIGR00972 3a0107s01c2 phosphat 100.0 1.9E-37 4E-42 342.0 21.9 201 358-568 2-232 (247)
179 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.9E-37 4.1E-42 339.4 21.8 198 358-569 2-222 (236)
180 COG4175 ProV ABC-type proline/ 100.0 1.1E-37 2.4E-42 328.7 18.6 203 357-570 4-256 (386)
181 PRK13644 cbiO cobalt transport 100.0 2.2E-37 4.8E-42 345.5 22.3 198 358-568 2-224 (274)
182 PRK14273 phosphate ABC transpo 100.0 2.5E-37 5.5E-42 342.4 22.5 204 356-569 6-239 (254)
183 PRK13536 nodulation factor exp 100.0 1.7E-37 3.6E-42 354.1 21.6 200 355-568 39-261 (340)
184 PRK13635 cbiO cobalt transport 100.0 2.8E-37 6.1E-42 345.3 22.9 201 357-569 5-230 (279)
185 cd03369 ABCC_NFT1 Domain 2 of 100.0 4.5E-37 9.8E-42 329.6 23.5 188 356-562 5-206 (207)
186 cd03258 ABC_MetN_methionine_tr 100.0 1.8E-37 3.9E-42 339.3 20.7 200 358-568 2-230 (233)
187 cd03235 ABC_Metallic_Cations A 100.0 1.3E-37 2.9E-42 335.4 19.3 188 359-561 1-213 (213)
188 cd03224 ABC_TM1139_LivF_branch 100.0 1.9E-37 4.1E-42 336.7 20.3 196 358-567 1-220 (222)
189 cd03301 ABC_MalK_N The N-termi 100.0 1.5E-37 3.3E-42 335.0 19.4 190 358-561 1-213 (213)
190 TIGR01288 nodI ATP-binding ABC 100.0 2.5E-37 5.3E-42 350.3 22.0 199 356-568 3-224 (303)
191 COG1131 CcmA ABC-type multidru 100.0 2.5E-37 5.5E-42 345.8 21.7 199 357-568 4-226 (293)
192 cd03218 ABC_YhbG The ABC trans 100.0 2.2E-37 4.8E-42 338.4 20.4 197 358-568 1-222 (232)
193 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.4E-37 3.1E-42 346.3 19.2 197 359-569 26-251 (269)
194 PRK14257 phosphate ABC transpo 100.0 1.5E-37 3.2E-42 353.4 19.5 202 940-1141 73-316 (329)
195 PRK13636 cbiO cobalt transport 100.0 3.1E-37 6.6E-42 346.0 21.9 200 357-569 5-232 (283)
196 PRK13641 cbiO cobalt transport 100.0 3.2E-37 6.9E-42 346.6 22.0 202 357-568 2-234 (287)
197 COG4615 PvdE ABC-type sideroph 100.0 8.6E-35 1.9E-39 313.4 39.1 471 72-560 4-529 (546)
198 PRK10744 pstB phosphate transp 100.0 4.9E-37 1.1E-41 340.9 22.3 203 356-568 12-244 (260)
199 cd03266 ABC_NatA_sodium_export 100.0 2.8E-37 6.1E-42 334.3 19.6 193 358-561 2-218 (218)
200 COG4555 NatA ABC-type Na+ tran 100.0 1.1E-37 2.4E-42 309.0 14.8 199 358-569 2-223 (245)
201 cd03264 ABC_drug_resistance_li 100.0 2.8E-37 6.1E-42 332.4 19.4 189 358-561 1-211 (211)
202 PRK11831 putative ABC transpor 100.0 4.7E-37 1E-41 342.4 21.7 200 356-569 6-234 (269)
203 PRK09493 glnQ glutamine ABC tr 100.0 4.7E-37 1E-41 337.4 21.2 197 358-568 2-225 (240)
204 PRK13640 cbiO cobalt transport 100.0 5.5E-37 1.2E-41 343.8 22.1 201 356-568 4-232 (282)
205 PRK10619 histidine/lysine/argi 100.0 5E-37 1.1E-41 340.4 21.1 200 356-568 4-241 (257)
206 PRK14235 phosphate transporter 100.0 6.1E-37 1.3E-41 341.1 21.8 204 355-568 17-251 (267)
207 PRK10070 glycine betaine trans 100.0 3.9E-37 8.5E-42 355.8 20.9 185 374-569 42-255 (400)
208 TIGR02211 LolD_lipo_ex lipopro 100.0 5.1E-37 1.1E-41 333.0 20.4 190 358-558 2-220 (221)
209 PRK13632 cbiO cobalt transport 100.0 8.2E-37 1.8E-41 340.9 22.6 201 356-568 6-231 (271)
210 cd03269 ABC_putative_ATPase Th 100.0 3.7E-37 8.1E-42 331.2 19.0 190 358-561 1-210 (210)
211 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.4E-37 9.6E-42 337.9 20.0 200 358-568 1-225 (242)
212 PRK13649 cbiO cobalt transport 100.0 5.5E-37 1.2E-41 344.4 21.1 201 358-568 3-234 (280)
213 PRK13633 cobalt transporter AT 100.0 1E-36 2.3E-41 341.4 23.2 202 357-569 4-234 (280)
214 PRK14274 phosphate ABC transpo 100.0 8.6E-37 1.9E-41 339.0 22.2 204 356-569 11-244 (259)
215 TIGR03415 ABC_choXWV_ATP choli 100.0 4E-37 8.6E-42 353.1 20.0 187 372-569 36-255 (382)
216 TIGR03411 urea_trans_UrtD urea 100.0 6.8E-37 1.5E-41 336.7 21.1 198 357-568 2-231 (242)
217 PRK13642 cbiO cobalt transport 100.0 8.7E-37 1.9E-41 341.5 22.2 202 357-569 4-230 (277)
218 PRK13645 cbiO cobalt transport 100.0 7.7E-37 1.7E-41 344.4 21.8 203 356-568 5-240 (289)
219 PRK11231 fecE iron-dicitrate t 100.0 7.7E-37 1.7E-41 338.6 21.3 198 357-568 2-227 (255)
220 PRK15079 oligopeptide ABC tran 100.0 8.6E-37 1.9E-41 347.5 22.2 205 356-570 7-253 (331)
221 COG0410 LivF ABC-type branched 100.0 5.2E-37 1.1E-41 314.4 18.3 206 357-570 3-228 (237)
222 PRK10247 putative ABC transpor 100.0 7.8E-37 1.7E-41 331.8 20.9 196 356-564 6-223 (225)
223 PRK11264 putative amino-acid A 100.0 6.4E-37 1.4E-41 338.6 20.5 198 357-568 3-233 (250)
224 cd03298 ABC_ThiQ_thiamine_tran 100.0 8.4E-37 1.8E-41 328.7 20.9 188 358-561 1-211 (211)
225 PRK14245 phosphate ABC transpo 100.0 6.8E-37 1.5E-41 338.1 20.7 203 357-569 3-235 (250)
226 PRK14248 phosphate ABC transpo 100.0 9E-37 1.9E-41 340.4 21.6 204 356-569 20-253 (268)
227 PRK14237 phosphate transporter 100.0 1.2E-36 2.6E-41 338.8 22.6 203 356-568 19-251 (267)
228 PRK10575 iron-hydroxamate tran 100.0 8.8E-37 1.9E-41 339.7 21.4 199 356-568 10-237 (265)
229 PRK11124 artP arginine transpo 100.0 1.1E-36 2.3E-41 335.0 21.7 197 357-567 2-229 (242)
230 PRK14259 phosphate ABC transpo 100.0 1.4E-36 3E-41 338.5 22.7 203 356-568 12-253 (269)
231 PRK11300 livG leucine/isoleuci 100.0 9.7E-37 2.1E-41 338.2 21.4 198 357-568 5-243 (255)
232 TIGR02673 FtsE cell division A 100.0 4.4E-37 9.6E-42 331.7 18.2 186 358-556 2-214 (214)
233 TIGR03522 GldA_ABC_ATP gliding 100.0 7.9E-37 1.7E-41 345.5 21.0 197 358-568 3-221 (301)
234 PRK14268 phosphate ABC transpo 100.0 9.1E-37 2E-41 338.4 21.0 203 356-568 11-242 (258)
235 PRK13638 cbiO cobalt transport 100.0 1E-36 2.2E-41 340.4 21.4 197 358-568 2-225 (271)
236 PRK10584 putative ABC transpor 100.0 1.3E-36 2.7E-41 331.4 21.6 193 357-560 6-227 (228)
237 PRK14239 phosphate transporter 100.0 1.1E-36 2.4E-41 337.1 21.4 203 357-569 5-237 (252)
238 PRK10895 lipopolysaccharide AB 100.0 1.2E-36 2.6E-41 334.4 21.4 198 357-568 3-226 (241)
239 cd03292 ABC_FtsE_transporter F 100.0 5.7E-37 1.2E-41 330.9 18.5 187 358-557 1-214 (214)
240 PRK13648 cbiO cobalt transport 100.0 2E-36 4.4E-41 337.5 23.4 202 356-569 6-232 (269)
241 PRK11614 livF leucine/isoleuci 100.0 1.3E-36 2.9E-41 333.1 21.5 198 357-568 5-226 (237)
242 PRK14249 phosphate ABC transpo 100.0 1.6E-36 3.5E-41 335.3 22.3 202 357-568 4-235 (251)
243 TIGR03410 urea_trans_UrtE urea 100.0 8.4E-37 1.8E-41 333.3 19.7 196 358-566 1-219 (230)
244 PRK13652 cbiO cobalt transport 100.0 1.5E-36 3.3E-41 339.6 22.2 199 357-568 3-227 (277)
245 PRK13639 cbiO cobalt transport 100.0 1.1E-36 2.3E-41 340.4 20.8 198 358-568 2-226 (275)
246 cd03247 ABCC_cytochrome_bd The 100.0 1.3E-36 2.8E-41 317.7 20.0 165 358-561 1-178 (178)
247 cd03223 ABCD_peroxisomal_ALDP 100.0 1.3E-36 2.8E-41 313.3 19.7 162 358-556 1-164 (166)
248 PRK14240 phosphate transporter 100.0 1.7E-36 3.7E-41 335.1 22.1 202 357-568 3-234 (250)
249 PRK14251 phosphate ABC transpo 100.0 1.1E-36 2.4E-41 336.8 20.5 203 357-569 4-236 (251)
250 PRK13548 hmuV hemin importer A 100.0 1.9E-36 4.1E-41 335.5 22.3 198 357-568 2-230 (258)
251 PRK14247 phosphate ABC transpo 100.0 1.7E-36 3.7E-41 335.1 21.9 202 357-568 3-234 (250)
252 TIGR03005 ectoine_ehuA ectoine 100.0 1.3E-36 2.8E-41 336.4 20.8 198 358-569 1-237 (252)
253 TIGR02769 nickel_nikE nickel i 100.0 2E-36 4.3E-41 336.9 22.3 207 357-573 2-245 (265)
254 PRK10253 iron-enterobactin tra 100.0 1.7E-36 3.6E-41 337.5 21.6 199 356-568 6-233 (265)
255 PRK14270 phosphate ABC transpo 100.0 1.7E-36 3.6E-41 335.2 21.4 203 357-569 4-236 (251)
256 PRK10771 thiQ thiamine transpo 100.0 3.6E-36 7.9E-41 328.4 23.8 196 358-569 2-220 (232)
257 cd03225 ABC_cobalt_CbiO_domain 100.0 7.9E-37 1.7E-41 329.0 18.3 186 359-556 1-211 (211)
258 PRK11248 tauB taurine transpor 100.0 1.6E-36 3.5E-41 334.9 20.9 192 358-563 2-215 (255)
259 PRK14236 phosphate transporter 100.0 2.4E-36 5.1E-41 337.3 21.7 204 355-568 23-256 (272)
260 TIGR03873 F420-0_ABC_ATP propo 100.0 1.9E-36 4E-41 335.7 20.7 197 358-568 2-226 (256)
261 PRK10908 cell division protein 100.0 1.7E-36 3.7E-41 328.8 20.0 188 358-558 2-216 (222)
262 PRK14267 phosphate ABC transpo 100.0 2E-36 4.4E-41 335.1 20.9 203 357-569 4-238 (253)
263 PRK14238 phosphate transporter 100.0 2.6E-36 5.6E-41 336.6 21.9 204 356-569 23-256 (271)
264 TIGR01188 drrA daunorubicin re 100.0 1.1E-36 2.5E-41 344.7 19.0 186 372-568 5-213 (302)
265 PRK14243 phosphate transporter 100.0 2.8E-36 6.1E-41 335.2 21.8 204 356-569 9-249 (264)
266 COG1126 GlnQ ABC-type polar am 100.0 5.6E-37 1.2E-41 309.2 14.5 195 948-1142 16-229 (240)
267 PRK11308 dppF dipeptide transp 100.0 3.1E-36 6.6E-41 342.7 22.4 204 356-569 4-245 (327)
268 PRK14244 phosphate ABC transpo 100.0 1.9E-36 4.1E-41 334.8 20.0 201 358-568 6-237 (251)
269 TIGR01978 sufC FeS assembly AT 100.0 2.2E-36 4.8E-41 333.0 20.4 197 358-567 1-233 (243)
270 TIGR03740 galliderm_ABC gallid 100.0 2.1E-36 4.5E-41 328.4 19.8 194 358-565 1-210 (223)
271 cd03262 ABC_HisP_GlnQ_permease 100.0 1.4E-36 3E-41 327.7 18.3 186 358-557 1-213 (213)
272 PRK09984 phosphonate/organopho 100.0 3.8E-36 8.3E-41 334.3 22.3 196 357-566 4-240 (262)
273 PRK11144 modC molybdate transp 100.0 3.1E-36 6.7E-41 347.0 21.8 196 358-570 2-220 (352)
274 cd03257 ABC_NikE_OppD_transpor 100.0 4.3E-36 9.4E-41 327.5 21.9 194 358-561 2-228 (228)
275 PRK14262 phosphate ABC transpo 100.0 2.9E-36 6.2E-41 333.3 20.4 202 357-568 3-234 (250)
276 PRK14253 phosphate ABC transpo 100.0 3.9E-36 8.4E-41 332.0 21.3 202 357-568 3-233 (249)
277 PRK11022 dppD dipeptide transp 100.0 3.9E-36 8.5E-41 342.1 22.0 206 357-570 3-245 (326)
278 PRK09544 znuC high-affinity zi 100.0 5E-36 1.1E-40 329.7 21.9 197 357-568 4-209 (251)
279 PRK14256 phosphate ABC transpo 100.0 4.8E-36 1E-40 331.8 21.8 204 356-569 3-237 (252)
280 TIGR01277 thiQ thiamine ABC tr 100.0 4.5E-36 9.8E-41 323.2 20.8 189 358-562 1-212 (213)
281 cd03300 ABC_PotA_N PotA is an 100.0 3E-36 6.5E-41 328.9 19.4 197 358-568 1-220 (232)
282 COG1137 YhbG ABC-type (unclass 100.0 1.5E-37 3.2E-42 307.7 8.1 199 357-569 4-229 (243)
283 PRK14261 phosphate ABC transpo 100.0 5.2E-36 1.1E-40 331.7 21.4 202 357-568 6-237 (253)
284 COG4525 TauB ABC-type taurine 100.0 1.4E-36 3.1E-41 298.7 14.8 194 358-563 4-219 (259)
285 TIGR00968 3a0106s01 sulfate AB 100.0 5.3E-36 1.1E-40 327.9 20.7 197 358-568 1-220 (237)
286 PRK14254 phosphate ABC transpo 100.0 4.7E-36 1E-40 336.2 20.7 203 356-568 38-269 (285)
287 PRK14271 phosphate ABC transpo 100.0 7E-36 1.5E-40 333.5 21.9 204 356-569 20-252 (276)
288 PRK14275 phosphate ABC transpo 100.0 5E-36 1.1E-40 336.5 20.7 205 355-569 37-271 (286)
289 cd03246 ABCC_Protease_Secretio 100.0 4E-36 8.6E-41 312.4 18.2 158 358-557 1-173 (173)
290 PRK14252 phosphate ABC transpo 100.0 8.9E-36 1.9E-40 331.8 22.0 204 355-568 14-249 (265)
291 PRK14260 phosphate ABC transpo 100.0 7.4E-36 1.6E-40 331.3 21.2 202 357-568 7-243 (259)
292 PRK15112 antimicrobial peptide 100.0 9.8E-36 2.1E-40 331.5 21.7 203 357-569 4-240 (267)
293 PRK14265 phosphate ABC transpo 100.0 1.2E-35 2.6E-40 331.5 22.5 205 355-569 18-259 (274)
294 PRK14263 phosphate ABC transpo 100.0 1.2E-35 2.6E-40 329.2 22.1 204 356-569 7-246 (261)
295 PRK15093 antimicrobial peptide 100.0 8.1E-36 1.8E-40 340.8 21.2 205 357-569 3-249 (330)
296 PRK15056 manganese/iron transp 100.0 9.7E-36 2.1E-40 332.4 21.0 198 357-568 6-230 (272)
297 PRK11701 phnK phosphonate C-P 100.0 1.1E-35 2.5E-40 329.8 21.5 200 357-569 6-242 (258)
298 PRK14264 phosphate ABC transpo 100.0 1.2E-35 2.7E-40 336.1 21.8 203 356-568 44-289 (305)
299 PRK14241 phosphate transporter 100.0 1.1E-35 2.5E-40 329.8 21.0 202 357-568 4-242 (258)
300 PRK14266 phosphate ABC transpo 100.0 1E-35 2.2E-40 328.9 20.5 203 357-569 3-235 (250)
301 PRK09473 oppD oligopeptide tra 100.0 9.3E-36 2E-40 339.2 20.8 207 356-570 11-253 (330)
302 COG4598 HisP ABC-type histidin 100.0 2.1E-36 4.5E-41 293.2 13.0 200 356-569 5-242 (256)
303 PRK14255 phosphate ABC transpo 100.0 1.4E-35 2.9E-40 328.3 21.4 203 357-569 5-237 (252)
304 cd03299 ABC_ModC_like Archeal 100.0 1.1E-35 2.5E-40 324.8 20.4 196 358-568 1-219 (235)
305 PRK14272 phosphate ABC transpo 100.0 1.3E-35 2.8E-40 328.6 21.0 203 357-569 4-237 (252)
306 PRK13547 hmuV hemin importer A 100.0 1.5E-35 3.2E-40 329.4 21.3 197 358-568 2-244 (272)
307 COG4181 Predicted ABC-type tra 100.0 4.6E-36 9.9E-41 289.1 14.8 192 357-559 6-226 (228)
308 COG4178 ABC-type uncharacteriz 100.0 4.1E-33 8.8E-38 326.4 42.3 259 288-553 315-587 (604)
309 COG1125 OpuBA ABC-type proline 100.0 3.7E-36 8E-41 308.6 14.7 200 946-1145 13-232 (309)
310 PRK10418 nikD nickel transport 100.0 2.6E-35 5.6E-40 326.0 22.6 201 357-569 4-231 (254)
311 PRK14258 phosphate ABC transpo 100.0 1.9E-35 4.1E-40 328.2 21.2 204 356-569 6-246 (261)
312 cd03234 ABCG_White The White s 100.0 2.1E-35 4.5E-40 321.1 21.1 194 357-561 3-226 (226)
313 COG0411 LivG ABC-type branched 100.0 4.1E-36 8.9E-41 310.2 14.2 200 357-570 4-241 (250)
314 TIGR02142 modC_ABC molybdenum 100.0 1.8E-35 3.9E-40 341.2 20.7 192 362-569 4-222 (354)
315 PRK13546 teichoic acids export 100.0 3.3E-35 7.2E-40 324.8 21.9 209 357-576 4-240 (264)
316 PRK10419 nikE nickel transport 100.0 2.7E-35 5.9E-40 327.9 21.3 208 357-574 3-247 (268)
317 TIGR02982 heterocyst_DevA ABC 100.0 2E-35 4.3E-40 320.0 19.4 189 358-557 2-219 (220)
318 PRK14246 phosphate ABC transpo 100.0 4.7E-35 1E-39 323.7 22.1 204 356-569 9-242 (257)
319 cd03297 ABC_ModC_molybdenum_tr 100.0 2.3E-35 5.1E-40 318.1 19.3 183 362-561 5-214 (214)
320 COG1123 ATPase components of v 100.0 2.6E-35 5.7E-40 340.7 20.5 205 355-569 278-520 (539)
321 cd03230 ABC_DR_subfamily_A Thi 100.0 2.5E-35 5.4E-40 306.4 18.4 157 358-557 1-173 (173)
322 COG1135 AbcC ABC-type metal io 100.0 9.8E-36 2.1E-40 315.4 15.3 203 947-1149 19-243 (339)
323 COG4559 ABC-type hemin transpo 100.0 3.2E-35 7E-40 293.8 17.7 198 358-569 2-231 (259)
324 TIGR02323 CP_lyasePhnK phospho 100.0 7E-35 1.5E-39 322.8 21.5 199 357-568 3-238 (253)
325 cd03213 ABCG_EPDR ABCG transpo 100.0 4.5E-35 9.8E-40 310.1 19.1 172 357-561 3-194 (194)
326 COG0444 DppD ABC-type dipeptid 100.0 5.1E-35 1.1E-39 315.7 19.7 203 358-571 2-246 (316)
327 PRK13545 tagH teichoic acids e 100.0 8.3E-35 1.8E-39 338.0 22.7 203 356-569 20-233 (549)
328 cd03233 ABC_PDR_domain1 The pl 100.0 6.2E-35 1.3E-39 311.1 19.9 178 357-561 3-202 (202)
329 cd03232 ABC_PDR_domain2 The pl 100.0 5.5E-35 1.2E-39 309.1 18.9 172 357-561 3-192 (192)
330 COG4619 ABC-type uncharacteriz 100.0 1.1E-35 2.4E-40 285.5 12.1 176 372-557 15-212 (223)
331 cd03288 ABCC_SUR2 The SUR doma 100.0 8.4E-35 1.8E-39 322.3 20.9 202 949-1150 36-255 (257)
332 cd03228 ABCC_MRP_Like The MRP 100.0 7.7E-35 1.7E-39 302.1 18.4 157 358-556 1-171 (171)
333 cd03229 ABC_Class3 This class 100.0 6.2E-35 1.3E-39 304.9 17.6 158 358-556 1-178 (178)
334 TIGR03608 L_ocin_972_ABC putat 100.0 5.2E-35 1.1E-39 313.7 17.3 179 360-552 1-206 (206)
335 TIGR01184 ntrCD nitrate transp 100.0 9.5E-35 2.1E-39 316.4 18.9 180 376-566 1-202 (230)
336 CHL00131 ycf16 sulfate ABC tra 100.0 2.6E-34 5.7E-39 318.1 22.3 196 357-565 7-238 (252)
337 cd03215 ABC_Carb_Monos_II This 100.0 8.6E-35 1.9E-39 305.0 17.5 158 357-557 4-182 (182)
338 PRK13543 cytochrome c biogenes 100.0 2.9E-34 6.3E-39 309.1 21.3 185 356-554 10-212 (214)
339 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.4E-34 3E-39 313.6 18.1 190 358-561 23-224 (224)
340 cd03231 ABC_CcmA_heme_exporter 100.0 4.5E-34 9.7E-39 304.6 20.9 181 358-552 1-198 (201)
341 cd03267 ABC_NatA_like Similar 100.0 1.9E-34 4.2E-39 315.2 18.5 179 372-561 33-236 (236)
342 PRK10261 glutathione transport 100.0 2.8E-34 6E-39 355.5 22.1 203 356-569 312-554 (623)
343 COG4604 CeuD ABC-type enteroch 100.0 2.8E-35 6E-40 290.5 10.5 198 358-569 2-226 (252)
344 TIGR02770 nickel_nikD nickel i 100.0 2.7E-34 5.8E-39 313.2 19.0 187 375-569 1-216 (230)
345 PRK03695 vitamin B12-transport 100.0 4.1E-34 8.8E-39 314.9 20.5 191 359-568 2-222 (248)
346 cd03217 ABC_FeS_Assembly ABC-t 100.0 3.5E-34 7.5E-39 305.0 19.3 168 358-563 1-189 (200)
347 PRK13538 cytochrome c biogenes 100.0 4.2E-34 9.1E-39 305.7 19.8 181 358-552 2-202 (204)
348 cd03252 ABCC_Hemolysin The ABC 100.0 4.1E-34 8.8E-39 313.6 20.0 202 947-1149 15-235 (237)
349 PRK13540 cytochrome c biogenes 100.0 4.9E-34 1.1E-38 304.2 19.8 180 358-551 2-198 (200)
350 PRK09580 sufC cysteine desulfu 100.0 1E-33 2.2E-38 312.7 22.4 196 358-566 2-233 (248)
351 COG1117 PstB ABC-type phosphat 100.0 1.5E-34 3.3E-39 289.7 12.8 195 947-1141 7-240 (253)
352 TIGR01186 proV glycine betaine 100.0 3E-34 6.5E-39 328.1 16.8 198 947-1144 6-225 (363)
353 COG4161 ArtP ABC-type arginine 100.0 3.9E-34 8.4E-39 272.4 14.4 198 357-568 2-230 (242)
354 PRK13539 cytochrome c biogenes 100.0 1.5E-33 3.3E-38 301.9 20.8 183 357-554 2-200 (207)
355 COG4148 ModC ABC-type molybdat 100.0 2.7E-34 5.9E-39 297.9 14.1 181 378-569 16-219 (352)
356 cd03214 ABC_Iron-Siderophores_ 100.0 4.8E-34 1E-38 298.8 16.1 176 359-561 1-180 (180)
357 cd03216 ABC_Carb_Monos_I This 100.0 1.1E-33 2.4E-38 290.6 17.9 159 358-559 1-162 (163)
358 PRK13549 xylose transporter AT 100.0 5.3E-34 1.1E-38 346.6 18.1 201 356-566 258-492 (506)
359 COG4608 AppF ABC-type oligopep 100.0 7.3E-34 1.6E-38 300.6 16.7 187 357-570 4-201 (268)
360 COG1127 Ttg2A ABC-type transpo 100.0 7E-34 1.5E-38 291.3 16.0 204 946-1149 20-246 (263)
361 TIGR03269 met_CoM_red_A2 methy 100.0 1.2E-33 2.6E-38 344.8 21.0 207 356-568 278-517 (520)
362 cd03237 ABC_RNaseL_inhibitor_d 100.0 1.3E-33 2.8E-38 309.1 18.9 190 365-567 1-206 (246)
363 TIGR02314 ABC_MetN D-methionin 100.0 8.1E-34 1.8E-38 323.0 17.5 201 948-1148 19-241 (343)
364 PRK13541 cytochrome c biogenes 100.0 2.1E-33 4.6E-38 298.0 19.3 178 358-550 2-193 (195)
365 TIGR02324 CP_lyasePhnL phospho 100.0 1.4E-33 2.9E-38 306.7 18.2 185 358-552 2-222 (224)
366 PRK15134 microcin C ABC transp 100.0 1.4E-33 3E-38 344.8 20.4 201 356-568 274-515 (529)
367 PRK15064 ABC transporter ATP-b 100.0 3.5E-33 7.7E-38 341.3 23.4 200 356-569 318-526 (530)
368 TIGR03771 anch_rpt_ABC anchore 100.0 1.8E-33 4E-38 304.7 18.0 176 381-568 1-201 (223)
369 TIGR01189 ccmA heme ABC export 100.0 2.8E-33 6.1E-38 297.9 18.9 178 358-550 1-196 (198)
370 cd03244 ABCC_MRP_domain2 Domai 100.0 2.4E-33 5.3E-38 304.2 18.3 186 948-1133 18-221 (221)
371 COG4172 ABC-type uncharacteriz 100.0 6.5E-33 1.4E-37 300.4 20.6 205 355-570 274-518 (534)
372 cd03369 ABCC_NFT1 Domain 2 of 100.0 4E-33 8.6E-38 299.1 18.7 185 942-1133 1-207 (207)
373 COG3839 MalK ABC-type sugar tr 100.0 1.7E-33 3.6E-38 312.0 16.1 197 946-1144 14-229 (338)
374 cd03251 ABCC_MsbA MsbA is an e 100.0 4.6E-33 1E-37 304.7 19.0 199 948-1147 16-233 (234)
375 cd03261 ABC_Org_Solvent_Resist 100.0 2.2E-33 4.7E-38 307.3 16.0 192 948-1139 14-227 (235)
376 TIGR01166 cbiO cobalt transpor 100.0 3E-33 6.4E-38 295.9 16.4 160 372-542 4-189 (190)
377 PLN03211 ABC transporter G-25; 100.0 4.3E-33 9.2E-38 343.8 20.0 190 372-568 80-296 (659)
378 PRK14250 phosphate ABC transpo 100.0 7.4E-33 1.6E-37 303.9 19.5 201 948-1148 17-231 (241)
379 TIGR00955 3a01204 The Eye Pigm 100.0 5.4E-33 1.2E-37 343.7 20.4 190 372-568 37-256 (617)
380 cd03253 ABCC_ATM1_transporter 100.0 8.5E-33 1.8E-37 303.1 19.3 202 948-1150 15-235 (236)
381 PRK09700 D-allose transporter 100.0 4E-33 8.7E-38 339.5 18.3 192 356-563 264-493 (510)
382 cd03221 ABCF_EF-3 ABCF_EF-3 E 100.0 9.4E-33 2E-37 277.2 16.9 141 358-556 1-144 (144)
383 COG4152 ABC-type uncharacteriz 100.0 2.7E-33 5.9E-38 285.6 12.8 199 357-569 2-220 (300)
384 COG3840 ThiQ ABC-type thiamine 100.0 5.2E-33 1.1E-37 271.1 13.9 192 948-1141 2-222 (231)
385 cd03260 ABC_PstB_phosphate_tra 100.0 5.7E-33 1.2E-37 302.5 15.9 189 948-1136 14-227 (227)
386 TIGR02633 xylG D-xylose ABC tr 100.0 6.1E-33 1.3E-37 337.3 18.0 197 357-563 257-487 (500)
387 PRK15177 Vi polysaccharide exp 100.0 1E-32 2.2E-37 296.3 17.3 183 375-568 2-192 (213)
388 PRK13650 cbiO cobalt transport 100.0 7.4E-33 1.6E-37 309.9 16.5 192 948-1139 21-230 (279)
389 PRK11819 putative ABC transpor 100.0 3.1E-32 6.8E-37 333.9 23.4 200 356-569 323-534 (556)
390 TIGR01257 rim_protein retinal- 100.0 1.5E-32 3.2E-37 361.9 21.8 203 355-569 1935-2160(2272)
391 COG1120 FepC ABC-type cobalami 100.0 8.2E-33 1.8E-37 295.2 15.3 194 946-1139 14-229 (258)
392 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.4E-32 7.3E-37 333.7 23.0 199 356-568 321-531 (552)
393 COG1122 CbiO ABC-type cobalt t 100.0 1E-32 2.2E-37 295.3 16.1 194 947-1140 17-230 (235)
394 COG4615 PvdE ABC-type sideroph 100.0 1.1E-30 2.4E-35 281.8 31.7 405 712-1131 75-530 (546)
395 PRK11288 araG L-arabinose tran 100.0 1.3E-32 2.8E-37 334.0 19.0 194 357-567 257-484 (501)
396 PRK13631 cbiO cobalt transport 100.0 1E-32 2.3E-37 312.9 16.9 190 950-1139 42-266 (320)
397 KOG0066 eIF2-interacting prote 100.0 5.2E-32 1.1E-36 293.3 21.3 196 357-565 264-496 (807)
398 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.6E-32 5.7E-37 299.4 18.9 201 947-1148 16-235 (238)
399 PRK10636 putative ABC transpor 100.0 4E-32 8.7E-37 336.3 22.8 198 356-567 311-516 (638)
400 KOG0060 Long-chain acyl-CoA tr 100.0 7.4E-30 1.6E-34 288.9 38.8 261 291-554 342-641 (659)
401 PRK11432 fbpC ferric transport 100.0 1.1E-32 2.3E-37 315.7 15.9 195 948-1144 20-232 (351)
402 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2E-32 4.3E-37 305.0 17.5 200 947-1146 37-258 (269)
403 cd03254 ABCC_Glucan_exporter_l 100.0 2.2E-32 4.7E-37 298.4 17.4 192 948-1139 17-227 (229)
404 PRK10762 D-ribose transporter 100.0 1.6E-32 3.5E-37 333.2 18.1 193 356-566 256-482 (501)
405 PRK11153 metN DL-methionine tr 100.0 1.6E-32 3.4E-37 315.1 17.0 199 947-1145 18-237 (343)
406 PRK11650 ugpC glycerol-3-phosp 100.0 2.3E-32 5E-37 313.9 18.2 196 948-1145 18-231 (356)
407 TIGR03415 ABC_choXWV_ATP choli 100.0 1.6E-32 3.5E-37 315.1 16.7 200 946-1145 36-261 (382)
408 PRK14269 phosphate ABC transpo 100.0 3.8E-32 8.3E-37 299.3 19.0 195 947-1141 15-233 (246)
409 PRK13647 cbiO cobalt transport 100.0 1.5E-32 3.2E-37 306.7 15.8 190 948-1137 19-226 (274)
410 PLN03073 ABC transporter F fam 100.0 6.9E-32 1.5E-36 334.5 23.2 198 356-567 507-713 (718)
411 PRK13635 cbiO cobalt transport 100.0 2.4E-32 5.1E-37 305.6 17.1 192 948-1139 21-230 (279)
412 TIGR00972 3a0107s01c2 phosphat 100.0 3.9E-32 8.5E-37 299.6 18.3 197 948-1144 15-238 (247)
413 cd03219 ABC_Mj1267_LivG_branch 100.0 2.3E-32 5E-37 299.6 16.1 192 948-1139 14-233 (236)
414 PRK10070 glycine betaine trans 100.0 3.3E-32 7.1E-37 314.9 18.1 198 947-1144 41-260 (400)
415 cd03296 ABC_CysA_sulfate_impor 100.0 4.3E-32 9.4E-37 297.7 18.1 193 947-1141 15-229 (239)
416 COG1124 DppF ABC-type dipeptid 100.0 2.5E-32 5.5E-37 281.8 15.1 202 949-1150 22-243 (252)
417 cd03263 ABC_subfamily_A The AB 100.0 1.8E-32 3.9E-37 297.1 14.6 188 948-1136 16-219 (220)
418 cd03256 ABC_PhnC_transporter A 100.0 2.6E-32 5.6E-37 300.3 16.1 191 947-1137 14-233 (241)
419 TIGR01187 potA spermidine/putr 100.0 3.3E-32 7.1E-37 310.5 17.1 168 391-569 1-191 (325)
420 PRK15079 oligopeptide ABC tran 100.0 6.1E-32 1.3E-36 307.7 19.1 200 947-1146 34-259 (331)
421 cd03258 ABC_MetN_methionine_tr 100.0 2.5E-32 5.5E-37 298.6 15.3 192 948-1139 19-231 (233)
422 PRK13637 cbiO cobalt transport 100.0 3E-32 6.5E-37 306.1 16.2 192 947-1138 20-234 (287)
423 PRK10851 sulfate/thiosulfate t 100.0 4.3E-32 9.3E-37 311.3 17.8 195 948-1144 16-232 (353)
424 TIGR03265 PhnT2 putative 2-ami 100.0 3.7E-32 8.1E-37 311.8 16.9 195 948-1144 18-230 (353)
425 PRK11147 ABC transporter ATPas 100.0 1.3E-31 2.8E-36 332.8 23.0 198 356-567 318-527 (635)
426 TIGR02315 ABC_phnC phosphonate 100.0 3.6E-32 7.7E-37 299.5 15.4 190 948-1137 16-234 (243)
427 PRK10535 macrolide transporter 100.0 1E-31 2.2E-36 333.6 21.4 199 357-566 4-230 (648)
428 PRK15439 autoinducer 2 ABC tra 100.0 5E-32 1.1E-36 329.0 17.8 193 356-567 267-491 (510)
429 cd03264 ABC_drug_resistance_li 100.0 4.4E-32 9.5E-37 292.0 15.3 182 948-1131 14-211 (211)
430 COG2884 FtsE Predicted ATPase 100.0 2.5E-32 5.4E-37 269.0 12.0 188 946-1133 14-221 (223)
431 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.2E-32 1.3E-36 297.1 16.2 194 948-1141 15-228 (242)
432 cd03224 ABC_TM1139_LivF_branch 100.0 7.4E-32 1.6E-36 292.8 16.5 191 948-1138 14-221 (222)
433 PRK09452 potA putrescine/sperm 100.0 8.6E-32 1.9E-36 310.1 17.9 194 949-1144 29-240 (375)
434 PRK14273 phosphate ABC transpo 100.0 8.6E-32 1.9E-36 298.2 17.2 197 949-1145 22-245 (254)
435 PRK14244 phosphate ABC transpo 100.0 6.5E-32 1.4E-36 298.6 16.1 198 947-1144 18-243 (251)
436 PRK09536 btuD corrinoid ABC tr 100.0 9E-32 1.9E-36 311.5 17.9 200 947-1148 16-236 (402)
437 PRK13642 cbiO cobalt transport 100.0 7.8E-32 1.7E-36 301.6 16.7 192 948-1139 21-230 (277)
438 TIGR03411 urea_trans_UrtD urea 100.0 1E-31 2.2E-36 295.5 17.4 192 947-1138 15-231 (242)
439 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.2E-31 2.6E-36 293.7 17.7 191 948-1139 15-222 (236)
440 cd03222 ABC_RNaseL_inhibitor T 100.0 7.1E-32 1.5E-36 278.2 14.8 149 361-564 4-159 (177)
441 PRK13632 cbiO cobalt transport 100.0 8.7E-32 1.9E-36 300.4 16.7 192 948-1139 23-232 (271)
442 PRK13636 cbiO cobalt transport 100.0 8.2E-32 1.8E-36 302.2 16.5 192 948-1139 20-232 (283)
443 PRK11000 maltose/maltodextrin 100.0 8.8E-32 1.9E-36 311.3 17.1 195 948-1144 17-229 (369)
444 TIGR01188 drrA daunorubicin re 100.0 8.4E-32 1.8E-36 305.0 16.5 191 948-1139 7-214 (302)
445 cd03226 ABC_cobalt_CbiO_domain 100.0 8.5E-32 1.8E-36 288.3 15.7 178 948-1128 14-205 (205)
446 PRK13652 cbiO cobalt transport 100.0 9.8E-32 2.1E-36 300.8 16.8 192 948-1139 18-228 (277)
447 PRK13648 cbiO cobalt transport 100.0 9.7E-32 2.1E-36 299.9 16.7 192 948-1139 23-232 (269)
448 TIGR03005 ectoine_ehuA ectoine 100.0 1.3E-31 2.9E-36 296.3 17.5 197 948-1144 14-242 (252)
449 cd03245 ABCC_bacteriocin_expor 100.0 1.6E-31 3.5E-36 289.7 17.7 185 947-1131 17-220 (220)
450 PRK13646 cbiO cobalt transport 100.0 7.8E-32 1.7E-36 302.8 15.7 192 948-1139 21-236 (286)
451 PRK13643 cbiO cobalt transport 100.0 6.9E-32 1.5E-36 303.3 15.2 192 948-1139 20-234 (288)
452 PRK10771 thiQ thiamine transpo 100.0 1.4E-31 3E-36 292.3 17.0 186 952-1139 17-220 (232)
453 PRK10575 iron-hydroxamate tran 100.0 1E-31 2.3E-36 298.9 16.2 192 947-1138 24-237 (265)
454 PRK13409 putative ATPase RIL; 100.0 1.8E-31 3.9E-36 325.4 19.7 191 356-562 339-536 (590)
455 PRK11308 dppF dipeptide transp 100.0 2.1E-31 4.4E-36 303.2 18.8 201 948-1148 29-254 (327)
456 COG1134 TagH ABC-type polysacc 100.0 2.4E-31 5.1E-36 275.5 17.4 185 373-568 40-236 (249)
457 COG4136 ABC-type uncharacteriz 100.0 1.8E-31 3.9E-36 251.5 14.9 182 357-552 2-207 (213)
458 PRK13640 cbiO cobalt transport 100.0 1.3E-31 2.9E-36 300.3 16.9 192 948-1139 21-233 (282)
459 PRK10744 pstB phosphate transp 100.0 2.1E-31 4.6E-36 295.8 18.2 194 948-1141 27-247 (260)
460 PRK10938 putative molybdenum t 100.0 1.4E-31 3E-36 324.7 18.2 191 356-560 259-484 (490)
461 TIGR00960 3a0501s02 Type II (G 100.0 5.6E-32 1.2E-36 292.3 13.1 180 948-1127 17-216 (216)
462 PRK11629 lolD lipoprotein tran 100.0 1.3E-31 2.8E-36 292.8 16.1 186 947-1132 22-228 (233)
463 PRK11831 putative ABC transpor 100.0 1.9E-31 4.1E-36 297.3 17.7 203 947-1149 20-244 (269)
464 cd03300 ABC_PotA_N PotA is an 100.0 9.7E-32 2.1E-36 293.4 14.9 192 947-1140 13-222 (232)
465 PRK10619 histidine/lysine/argi 100.0 2.3E-31 5E-36 295.1 18.0 195 947-1141 18-244 (257)
466 cd03259 ABC_Carb_Solutes_like 100.0 1E-31 2.2E-36 289.6 14.7 182 948-1131 14-213 (213)
467 PRK14267 phosphate ABC transpo 100.0 1.8E-31 3.8E-36 295.6 17.0 198 948-1145 18-244 (253)
468 TIGR02769 nickel_nikE nickel i 100.0 2.5E-31 5.5E-36 295.9 18.1 202 947-1148 24-250 (265)
469 TIGR03258 PhnT 2-aminoethylpho 100.0 1.5E-31 3.3E-36 307.0 16.8 195 948-1144 19-234 (362)
470 COG3842 PotA ABC-type spermidi 100.0 9.2E-32 2E-36 299.7 14.5 197 947-1145 18-233 (352)
471 PRK13633 cobalt transporter AT 100.0 1.5E-31 3.2E-36 299.8 16.2 192 948-1139 24-234 (280)
472 PRK14247 phosphate ABC transpo 100.0 2.9E-31 6.3E-36 293.3 18.2 198 948-1145 17-241 (250)
473 PRK14242 phosphate transporter 100.0 1.9E-31 4.2E-36 295.3 16.8 194 948-1141 20-240 (253)
474 cd03265 ABC_DrrA DrrA is the A 100.0 2E-31 4.3E-36 288.8 16.4 188 948-1136 14-219 (220)
475 PRK14251 phosphate ABC transpo 100.0 2.1E-31 4.5E-36 294.7 16.9 198 948-1145 18-242 (251)
476 PRK13644 cbiO cobalt transport 100.0 2E-31 4.4E-36 297.5 16.8 191 949-1139 17-225 (274)
477 PRK11124 artP arginine transpo 100.0 2.2E-31 4.9E-36 292.8 16.9 192 948-1139 16-231 (242)
478 PRK14268 phosphate ABC transpo 100.0 2.3E-31 5E-36 295.2 16.9 197 948-1144 26-248 (258)
479 PRK09493 glnQ glutamine ABC tr 100.0 1.7E-31 3.8E-36 293.2 15.8 193 948-1140 15-227 (240)
480 COG1119 ModF ABC-type molybden 100.0 3.5E-31 7.5E-36 273.5 16.9 195 354-562 28-256 (257)
481 PRK11231 fecE iron-dicitrate t 100.0 2E-31 4.4E-36 295.2 16.3 192 947-1138 15-227 (255)
482 cd03268 ABC_BcrA_bacitracin_re 100.0 1.8E-31 3.8E-36 286.7 15.3 182 948-1131 14-208 (208)
483 PRK11607 potG putrescine trans 100.0 2.3E-31 5.1E-36 307.2 17.4 194 949-1144 34-245 (377)
484 PRK13537 nodulation ABC transp 100.0 1.6E-31 3.5E-36 302.2 15.7 191 948-1139 21-228 (306)
485 PRK14263 phosphate ABC transpo 100.0 4.2E-31 9.1E-36 292.8 18.7 199 947-1145 21-252 (261)
486 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.9E-31 4.1E-36 287.1 15.5 178 952-1131 16-211 (211)
487 cd03236 ABC_RNaseL_inhibitor_d 100.0 2.1E-31 4.6E-36 292.7 16.1 186 361-561 4-220 (255)
488 PRK13651 cobalt transporter AT 100.0 2E-31 4.3E-36 300.7 16.3 192 948-1139 21-255 (305)
489 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.3E-31 2.9E-36 289.9 14.2 181 947-1127 17-218 (218)
490 TIGR00968 3a0106s01 sulfate AB 100.0 3.2E-31 6.9E-36 290.2 17.1 190 948-1139 14-221 (237)
491 PRK14235 phosphate transporter 100.0 5.3E-31 1.2E-35 293.4 19.1 194 949-1142 34-255 (267)
492 cd03218 ABC_YhbG The ABC trans 100.0 2E-31 4.3E-36 291.4 15.2 192 947-1138 13-222 (232)
493 cd03266 ABC_NatA_sodium_export 100.0 1.1E-31 2.5E-36 290.4 13.0 183 948-1131 19-218 (218)
494 PRK13634 cbiO cobalt transport 100.0 2.2E-31 4.7E-36 299.6 15.7 192 948-1139 21-236 (290)
495 PRK14259 phosphate ABC transpo 100.0 5.4E-31 1.2E-35 293.5 18.7 193 949-1141 28-256 (269)
496 TIGR00956 3a01205 Pleiotropic 100.0 4.5E-31 9.9E-36 349.8 21.4 202 357-565 759-990 (1394)
497 PRK11264 putative amino-acid A 100.0 4.2E-31 9.2E-36 292.2 17.7 202 948-1149 17-245 (250)
498 COG1136 SalX ABC-type antimicr 100.0 3.9E-31 8.4E-36 276.9 16.3 182 948-1129 19-222 (226)
499 PRK10982 galactose/methyl gala 100.0 2.7E-31 5.9E-36 321.9 17.4 194 356-564 249-476 (491)
500 PRK14245 phosphate ABC transpo 100.0 3.7E-31 8E-36 292.4 16.9 195 948-1142 17-238 (250)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.6e-217 Score=2011.81 Aligned_cols=1136 Identities=46% Similarity=0.745 Sum_probs=1015.9
Q ss_pred CCCCccCh--hHHHHHHhHHHHHHhhccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHhhcccccCCccchHHHHHHHHH
Q 037346 3 TPYSNAGL--FSIRSFSWMGSLIALGNKRTLDLEDVPRLDCSDSIYGVSPVLQNKLEAVVGVANRLTALRLAKVLFFSAW 80 (1156)
Q Consensus 3 ~p~~~~~~--~s~~~f~w~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 80 (1156)
+|.+.++. +|+++|+|++|++++|+|++|+.+|+|+++++|+++.+.++|++.|+++.++ ..++|+++++++++||
T Consensus 123 ~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~--~~~~psl~~al~~~f~ 200 (1381)
T KOG0054|consen 123 NPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGR--SGKKPSLLRALLRTFG 200 (1381)
T ss_pred CcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhcc--ccCCcHHHHHHHHHHH
Confidence 56677777 9999999999999999999999999999999999999999999999998732 2267899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchhhHH-----------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 81 QEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEYEGYVL-----------CLSERHWFFQVQQFGIRFRATLFAM 149 (1156)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~~g~~l-----------~~~~~~~~~~~~~~~~~~r~~l~~~ 149 (1156)
+.+++.+++.++...+.+++|.+++.+++++++++...+.|+++ +++.++|+|...+.|+|+|.++.+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~ 280 (1381)
T KOG0054|consen 201 RTFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISA 280 (1381)
T ss_pred HHHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHH
Confidence 99999999999999999999999999999998764444444333 6678999999999999999999999
Q ss_pred HHHHHhcCCccccCCCCHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 150 IYNKGLTLSGQAKQGNTSGEIINLIAVDAER--------------------ALLILYKKLGLASIATLLATAIVMLANFP 209 (1156)
Q Consensus 150 i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~--------------------~~~ll~~~lg~~~l~~~~~~~~~~~~~~~ 209 (1156)
||+|.|+++.....+.++|+|+|+|++|+++ ++++||..+|+++++|++++++++|++.+
T Consensus 281 IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~ 360 (1381)
T KOG0054|consen 281 IYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSF 360 (1381)
T ss_pred HHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 9999999999988889999999999999999 67899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 210 LGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE---------LKKNETAWLKKSVYTEAMISFFCWGAPTFVSV 280 (1156)
Q Consensus 210 ~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e---------~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (1156)
+++++.++|++.|+.+|+|++.++|+|+|||+||+|+|| .|++|++.+++..+..++..+++++.|+++++
T Consensus 361 ~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~ 440 (1381)
T KOG0054|consen 361 LAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSV 440 (1381)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HHHHHHH-HhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCccEE
Q 037346 281 VTFGSCI-LLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSDTAIE 359 (1156)
Q Consensus 281 ~~f~~~~-~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~~~i~ 359 (1156)
++|++|. ..++.+|+..+|+++++|++++.|+..+|..+..+.++.+|++|+++||..+|.+.......+....+..++
T Consensus 441 ~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~ 520 (1381)
T KOG0054|consen 441 VTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIE 520 (1381)
T ss_pred HHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEE
Confidence 9999999 678899999999999999999999999999999999999999999999999887665433223334456799
Q ss_pred EeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCeEEEEecCCcCCCccHHH
Q 037346 360 IIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGTKAYVAQSPWIQSGKIEE 439 (1156)
Q Consensus 360 ~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~~~~v~Q~~~~~~~ti~e 439 (1156)
++|++|+|+...+.+.|+||||+|++|+++||||++||||||||.+|+||++..+|++.++|.+|||||+||++++||||
T Consensus 521 i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngTvre 600 (1381)
T KOG0054|consen 521 IKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVRE 600 (1381)
T ss_pred EeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCcHHH
Confidence 99999999875556799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHH
Q 037346 440 NILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGA 519 (1156)
Q Consensus 440 ni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~ 519 (1156)
||+||.++|++||++|+++|+|++|++.+|.||.|+|||+|.+|||||||||+||||+|+|+||||||||+||||+|+.+
T Consensus 601 NILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~ 680 (1381)
T KOG0054|consen 601 NILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGK 680 (1381)
T ss_pred hhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHHhhhhhccCCCCCCCCCccc
Q 037346 520 HLFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVGAHKQALSGLDSIDRGPVSE 597 (1156)
Q Consensus 520 ~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1156)
+||+.|+. +++||+|+|||++++++.||+|++|+||+|.+.|+|+|+++.+..+.++........+.. .+..+...
T Consensus 681 ~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~ 758 (1381)
T KOG0054|consen 681 HIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESEQEEE--ASEKDLES 758 (1381)
T ss_pred HHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchhhccc--cccccccc
Confidence 99999986 688999999999999999999999999999999999999988888877732221111110 00000000
Q ss_pred ccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 037346 598 RKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQI 677 (1156)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 677 (1156)
.......+. +. .... ....+..........+..++|+++.|.++|++|+.|+++.+++..+++++++.++.++
T Consensus 759 ~~~~~~~~~-----~~-~~~~-~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~ 831 (1381)
T KOG0054|consen 759 GESSRESES-----RS-LESL-SSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQV 831 (1381)
T ss_pred cccccchhh-----hh-hhhh-cccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 000000000 00 0000 0000000111111344566778899999999999999997777777777888899999
Q ss_pred HHhhhhhhhhhccccccccCCC-CCchhhHHHHHH------------------HHHHHHHHHHHHHHHHhcccccccccc
Q 037346 678 FQIGSNYWMAWATPVAKDVNPA-VGASTLIIVYVG------------------AGYKTATQLFNKMHVCIFRAPMYFFDS 738 (1156)
Q Consensus 678 ~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~------------------~~~~~~~~l~~~l~~~ll~~p~~ff~~ 738 (1156)
+..+.++|+++|++........ .....|+++|.. .++++++.||++|+++++|+||+|||+
T Consensus 832 ~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt 911 (1381)
T KOG0054|consen 832 LQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT 911 (1381)
T ss_pred HHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC
Confidence 9999999999998654322211 234455555543 678999999999999999999999999
Q ss_pred ccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 739 TPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYITSTRELS 818 (1156)
Q Consensus 739 ~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1156)
||+|||+|||+ +|+..+|..+|..+..++..++.+++++++++++.|+++++++|+.+++++++++|.+++|+++
T Consensus 912 TP~GRILNRFS-----kD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLk 986 (1381)
T KOG0054|consen 912 TPTGRILNRFS-----KDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELK 986 (1381)
T ss_pred CCccchhhhcc-----cchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 037346 819 RLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSITFAFSLAFLISV 898 (1156)
Q Consensus 819 ~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 898 (1156)
|+++.+|||+++|++|+++|+.|||||++|++|.+++.+++|.+.++.|....+++|++.|+++++.+++.+++.+++..
T Consensus 987 RLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~ 1066 (1381)
T KOG0054|consen 987 RLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLL 1066 (1381)
T ss_pred HhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888877776655
Q ss_pred CCCccchH-----------------------HHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEE
Q 037346 899 PNGIIHPY-----------------------KNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQV 955 (1156)
Q Consensus 899 ~~~~~~~~-----------------------~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf 955 (1156)
..+..+++ +++|+.|+|+|||.+|.++|+|++...+...|+++||.+|+|+|+|+++
T Consensus 1067 ~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~ 1146 (1381)
T KOG0054|consen 1067 PSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSL 1146 (1381)
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEE
Confidence 44322222 7899999999999999999999666555555889999999999999999
Q ss_pred EEcCCCCceee---------------CCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccc
Q 037346 956 RYAPNLPLVLR---------------GRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMF 1020 (1156)
Q Consensus 956 ~Y~~~~~~vL~---------------G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF 1020 (1156)
+|+|+.|+||+ ||||||||||+++|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||
T Consensus 1147 RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLF 1226 (1381)
T KOG0054|consen 1147 RYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLF 1226 (1381)
T ss_pred EeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCcee
Confidence 99998887665 999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhccCCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCC
Q 037346 1021 EGTTRSNLDPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASV 1082 (1156)
Q Consensus 1021 ~gTIr~Nl~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~L 1082 (1156)
+||+|.||||+++++|+|||+||++|+|+++|+++|+|||+. ||||||++||||||||||++
T Consensus 1227 sGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsV 1306 (1381)
T KOG0054|consen 1227 SGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASV 1306 (1381)
T ss_pred cCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccC
Confidence 999999999999999999999999999999999999999976 89999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHHHhcc
Q 037346 1083 DTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAEYTSS 1154 (1156)
Q Consensus 1083 D~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~~~~~ 1154 (1156)
|++||..||++||+.|++||||+||||++||.|||||+|||+|+|+|+|+|++|+++++|.|++++.+....
T Consensus 1307 D~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~~~ 1378 (1381)
T KOG0054|consen 1307 DPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAALS 1378 (1381)
T ss_pred ChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999888876543
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.3e-176 Score=1738.12 Aligned_cols=1130 Identities=34% Similarity=0.578 Sum_probs=953.7
Q ss_pred CCCCCccChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHhhcccccCCccchHHHHHHHHHH
Q 037346 2 VTPYSNAGLFSIRSFSWMGSLIALGNKRTLDLEDVPRLDCSDSIYGVSPVLQNKLEAVVGVANRLTALRLAKVLFFSAWQ 81 (1156)
Q Consensus 2 ~~p~~~~~~~s~~~f~w~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 81 (1156)
.+||+++|+|||++|+|++|++++|++++|+.+|||+++++++++.+.++|++.|+++. ++++++++++++++|++
T Consensus 226 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~----~~~~~~l~~~l~~~~~~ 301 (1622)
T PLN03130 226 ICPERHANIFSRIFFGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEEL----KKPKPWLLRALNNSLGG 301 (1622)
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHh----ccCCchHHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999875 23568999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchhhHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 82 EILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEYEGYVL-----------CLSERHWFFQVQQFGIRFRATLFAMI 150 (1156)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~~g~~l-----------~~~~~~~~~~~~~~~~~~r~~l~~~i 150 (1156)
.++.++++.++..++.+++|++++.+++++.+++. .+.++++ +++.++|.+...+++.++|..++..+
T Consensus 302 ~~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i 380 (1622)
T PLN03130 302 RFWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGEP-AWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAV 380 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999864331 1112111 22345566667899999999999999
Q ss_pred HHHHhcCCccccCCCCHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 151 YNKGLTLSGQAKQGNTSGEIINLIAVDAER--------------------ALLILYKKLGLASIATLLATAIVMLANFPL 210 (1156)
Q Consensus 151 ~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~--------------------~~~ll~~~lg~~~l~~~~~~~~~~~~~~~~ 210 (1156)
|+|.++++...+++.++|+++|+|++|+++ +++++++.+|+++++|+++++++++++..+
T Consensus 381 ~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~ 460 (1622)
T PLN03130 381 FRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFI 460 (1622)
T ss_pred HHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888889999999999999998 346678889999998888888888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 211 GRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE---------LKKNETAWLKKSVYTEAMISFFCWGAPTFVSVV 281 (1156)
Q Consensus 211 ~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e---------~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (1156)
.+...+.+++.++.+|+|.+.++|+++|||+||+|+|| .|+.|++..++..+..++..++....|.++.++
T Consensus 461 ~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 540 (1622)
T PLN03130 461 ISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVV 540 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 577788877777766666665556667777888
Q ss_pred HHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCccEEEe
Q 037346 282 TFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSDTAIEII 361 (1156)
Q Consensus 282 ~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~~~i~~~ 361 (1156)
+|++|.+.++.+|++.+|+++++++.+..|+..+|..+..+.++++|++||++|++.++...... .+.......|+++
T Consensus 541 ~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~--~~~~~~~~~I~~~ 618 (1622)
T PLN03130 541 SFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN--PPLEPGLPAISIK 618 (1622)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC--CcccCCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999998765422110 1111122469999
Q ss_pred eeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCC-cEEEEcCeEEEEecCCcCCCccHHHH
Q 037346 362 DGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKES-GIIRLCGTKAYVAQSPWIQSGKIEEN 440 (1156)
Q Consensus 362 ~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~-G~i~~~g~~~~v~Q~~~~~~~ti~en 440 (1156)
|++|+|+..+++++|+|+||+|++|++++|+||+|||||||+++|+|+++|++ |+|.+.|+++||+|+||+|++|||||
T Consensus 619 nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreN 698 (1622)
T PLN03130 619 NGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDN 698 (1622)
T ss_pred eeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHH
Confidence 99999975445689999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred hhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHH
Q 037346 441 ILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAH 520 (1156)
Q Consensus 441 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~ 520 (1156)
|+||.++++++|++++++|+|.+|++.+|+||+|.|||+|.+|||||||||+||||+|++||||||||||||||++++++
T Consensus 699 I~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~ 778 (1622)
T PLN03130 699 ILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQ 778 (1622)
T ss_pred HhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHHhhhhhccCCCCCCCCCcccc
Q 037346 521 LFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVGAHKQALSGLDSIDRGPVSER 598 (1156)
Q Consensus 521 i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1156)
+++.++. .+++|+|+|||+++.++.||+|++|++|+++++|+++++++..+.|.++...+....+.... +..+ ..
T Consensus 779 I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~-~~~~--~~ 855 (1622)
T PLN03130 779 VFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEE-NGEE--ED 855 (1622)
T ss_pred HHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhcccccccccc-cccc--cc
Confidence 9988765 47899999999999999999999999999999999999998777777776543211100000 0000 00
Q ss_pred cccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 037346 599 KSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIF 678 (1156)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 678 (1156)
................. ..................+|+++.|.+++.+|+.|+++.++...+.+++++.++.+++
T Consensus 856 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~ 930 (1622)
T PLN03130 856 DQTSSKPVANGNANNLK-----KDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVF 930 (1622)
T ss_pred ccccccccccccccccc-----ccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 00000000000000000 0000000000011223456778889999999999999876655555556666777888
Q ss_pred HhhhhhhhhhccccccccCCCCCchhhHHHHHH------------------HHHHHHHHHHHHHHHHhcccccccccccc
Q 037346 679 QIGSNYWMAWATPVAKDVNPAVGASTLIIVYVG------------------AGYKTATQLFNKMHVCIFRAPMYFFDSTP 740 (1156)
Q Consensus 679 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~l~~~l~~~ll~~p~~ff~~~~ 740 (1156)
..+.++|+++|.+...... .....++++|++ .+.+++.++|++++++++++|++||+++|
T Consensus 931 ~~~~~~wl~~w~~~~~~~~--~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~ 1008 (1622)
T PLN03130 931 RVSSSTWLSEWTDQGTPKT--HGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNP 1008 (1622)
T ss_pred HHHHHHHHHHHHhccccCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCC
Confidence 8899999998875322111 111222222221 56789999999999999999999999999
Q ss_pred ccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 741 SGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYITSTRELSRL 820 (1156)
Q Consensus 741 ~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1156)
+|+|+|||+ .|+..+|..++..+..++..++.+++.++++++++|..+++++|++++++++..+|.+..|++++.
T Consensus 1009 ~G~IlnR~s-----~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~ 1083 (1622)
T PLN03130 1009 LGRIINRFA-----KDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRL 1083 (1622)
T ss_pred chHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 999999999999999999999999999988888888777778888777788888899999999999
Q ss_pred HhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 037346 821 IGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSITFAFSLAFLISVPN 900 (1156)
Q Consensus 821 ~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 900 (1156)
+..+++|+++++.|+++|+.|||+|+.+++|.+.+.+..+...+..+.....++|++.++++++.+++.+...+.+....
T Consensus 1084 ~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~ 1163 (1622)
T PLN03130 1084 DSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNG 1163 (1622)
T ss_pred HHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999999999999999888899999998888776554433322221110
Q ss_pred C---------c------------------cchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEE
Q 037346 901 G---------I------------------IHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHL 953 (1156)
Q Consensus 901 ~---------~------------------~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~V 953 (1156)
. . ......++..+++++|+.+|.+.|+|++...+...++..||..|.|+|+||
T Consensus 1164 ~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nV 1243 (1622)
T PLN03130 1164 RAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDV 1243 (1622)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEE
Confidence 0 0 001145688999999999999988886533233344567999999999999
Q ss_pred EEEEcCCCCc---------------eeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccc
Q 037346 954 QVRYAPNLPL---------------VLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPT 1018 (1156)
Q Consensus 954 sf~Y~~~~~~---------------vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~ 1018 (1156)
+|+|+++.++ +|+||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+
T Consensus 1244 sf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~ 1323 (1622)
T PLN03130 1244 VLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPV 1323 (1622)
T ss_pred EEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCc
Confidence 9999876543 4559999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhccCCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCc
Q 037346 1019 MFEGTTRSNLDPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATA 1080 (1156)
Q Consensus 1019 LF~gTIr~Nl~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS 1080 (1156)
||+||||+||+|+++++|+|+|+||++|+++++|.++|+|||+. ||||||+|+|||||||||
T Consensus 1324 LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATS 1403 (1622)
T PLN03130 1324 LFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATA 1403 (1622)
T ss_pred cccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 99999999999999999999999999999999999999999975 899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHHHhc
Q 037346 1081 SVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAEYTS 1153 (1156)
Q Consensus 1081 ~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~~~~ 1153 (1156)
+||++||+.||++|++.+++||+|+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|+++++.
T Consensus 1404 aLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1404 AVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGA 1476 (1622)
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcCh
Confidence 9999999999999999999999999999999999999999999999999999999998778999999997664
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-172 Score=1709.94 Aligned_cols=1128 Identities=33% Similarity=0.570 Sum_probs=945.4
Q ss_pred CCCCCccChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHhhcccccCCccchHHHHHHHHHH
Q 037346 2 VTPYSNAGLFSIRSFSWMGSLIALGNKRTLDLEDVPRLDCSDSIYGVSPVLQNKLEAVVGVANRLTALRLAKVLFFSAWQ 81 (1156)
Q Consensus 2 ~~p~~~~~~~s~~~f~w~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 81 (1156)
.+||+++|+|||++|+|++|++++|++++|+.+|||+++++++++.++++|++.|+++. +.++++++++++++|++
T Consensus 226 ~~pe~~a~~~s~~~f~w~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~----~~~~~~l~~~l~~~~~~ 301 (1495)
T PLN03232 226 ICPERYASIFSRIYFSWMTPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEES----RRPKPWLLRALNNSLGG 301 (1495)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhh----ccCCchHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999865 23468999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchhhHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 82 EILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEYEGYVL-----------CLSERHWFFQVQQFGIRFRATLFAMI 150 (1156)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~~g~~l-----------~~~~~~~~~~~~~~~~~~r~~l~~~i 150 (1156)
.++.++++.++..++.+++|++++.+++++..++. .+.++.+ +++.++|.+...+++.++|..++..+
T Consensus 302 ~~~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i 380 (1495)
T PLN03232 302 RFWLGGIFKIGHDLSQFVGPVILSHLLQSMQEGDP-AWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAI 380 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999864332 1222211 33445677777899999999999999
Q ss_pred HHHHhcCCccccCCCCHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 151 YNKGLTLSGQAKQGNTSGEIINLIAVDAER--------------------ALLILYKKLGLASIATLLATAIVMLANFPL 210 (1156)
Q Consensus 151 ~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~--------------------~~~ll~~~lg~~~l~~~~~~~~~~~~~~~~ 210 (1156)
|+|.++++...+++.++|+++|++++|+++ +++++|+.+|+++++++++++++++++..+
T Consensus 381 ~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~ 460 (1495)
T PLN03232 381 FHKSLRLTHEARKNFASGKVTNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLI 460 (1495)
T ss_pred HHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888889999999999999998 345677888998888887777788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 211 GRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE---------LKKNETAWLKKSVYTEAMISFFCWGAPTFVSVV 281 (1156)
Q Consensus 211 ~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e---------~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (1156)
++...+.+++.++.+|+|.+.++|+++|||+||+|+|| .|++|.+..++.....++..++....|.++.++
T Consensus 461 ~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (1495)
T PLN03232 461 VRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLV 540 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 567777777776666555555555567777778
Q ss_pred HHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCccEEEe
Q 037346 282 TFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSDTAIEII 361 (1156)
Q Consensus 282 ~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~~~i~~~ 361 (1156)
+|++|.+.++.+|++.+|+++++++.+..|+..+|..+..+.++++|++||++|++.++...... .+.......|+++
T Consensus 541 ~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~--~~~~~~~~~I~~~ 618 (1495)
T PLN03232 541 SFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN--PPLQPGAPAISIK 618 (1495)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc--CCcCCCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999998765322110 1111122469999
Q ss_pred eeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCc-EEEEcCeEEEEecCCcCCCccHHHH
Q 037346 362 DGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESG-IIRLCGTKAYVAQSPWIQSGKIEEN 440 (1156)
Q Consensus 362 ~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G-~i~~~g~~~~v~Q~~~~~~~ti~en 440 (1156)
|++|+|+..+++++|+|+||+|++||+++|+||+|||||||+++|+|+++|++| .+.+.++++||+|+||+|++|||||
T Consensus 619 ~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreN 698 (1495)
T PLN03232 619 NGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVREN 698 (1495)
T ss_pred eeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHH
Confidence 999999854456899999999999999999999999999999999999999997 4567899999999999999999999
Q ss_pred hhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHH
Q 037346 441 ILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAH 520 (1156)
Q Consensus 441 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~ 520 (1156)
|+||.++++++|++++++|+|.+|++.+|+||+|.|||+|.+|||||||||+||||+|++||||||||||||||++++++
T Consensus 699 I~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~ 778 (1495)
T PLN03232 699 ILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQ 778 (1495)
T ss_pred hhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHHhhhhhccCCCCCCCCCcccc
Q 037346 521 LFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVGAHKQALSGLDSIDRGPVSER 598 (1156)
Q Consensus 521 i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1156)
+++.++. .+++|+|+|||+++.++.||+|++|++|+++++|+++++++.++.|.++...+....+.. . +. +. ..
T Consensus 779 I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~-~-~~-~~-~~ 854 (1495)
T PLN03232 779 VFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQ-E-VN-TN-DE 854 (1495)
T ss_pred HHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhcccccccc-c-cc-cc-cc
Confidence 9988765 478999999999999999999999999999999999999987777777765432111000 0 00 00 00
Q ss_pred cccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 037346 599 KSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIF 678 (1156)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 678 (1156)
......+. .. ... . ...................+|+++.|.+++++|+.|+++.++.+.+.+++++.++.+++
T Consensus 855 ~~~~~~~~--~~-~~~---~-~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~ 927 (1495)
T PLN03232 855 NILKLGPT--VT-IDV---S-ERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVL 927 (1495)
T ss_pred cccccccc--cc-ccc---c-ccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 00000000 00 000 0 00000000000011124456778889999999999999877655555566666677888
Q ss_pred HhhhhhhhhhccccccccCCCCCchhhHHHHHH------------------HHHHHHHHHHHHHHHHhcccccccccccc
Q 037346 679 QIGSNYWMAWATPVAKDVNPAVGASTLIIVYVG------------------AGYKTATQLFNKMHVCIFRAPMYFFDSTP 740 (1156)
Q Consensus 679 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~l~~~l~~~ll~~p~~ff~~~~ 740 (1156)
..+.++|+++|.+..... ......|+++|++ .+.+++.++|++++++++++|++||+++|
T Consensus 928 ~~~~~~wl~~w~~~~~~~--~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~ 1005 (1495)
T PLN03232 928 RVSSSTWLSIWTDQSTPK--SYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNP 1005 (1495)
T ss_pred HHHHHHHHHHHhcccCCC--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCC
Confidence 888999999887532110 1112233333322 56799999999999999999999999999
Q ss_pred ccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 741 SGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYITSTRELSRL 820 (1156)
Q Consensus 741 ~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1156)
+|+++|||+ +|+..+|..++..+..++..++.+++.+++++..++..+++++|+++++++++.+|.+..|++++.
T Consensus 1006 ~G~ilnr~s-----~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 1080 (1495)
T PLN03232 1006 TGRVINRFS-----KDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRL 1080 (1495)
T ss_pred chHHHHHhH-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 899999999999888888888888888888877777666677777777777888899999999999
Q ss_pred HhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 037346 821 IGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSITFAFSLAFLISVPN 900 (1156)
Q Consensus 821 ~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 900 (1156)
+..+++|++++++|+++|+.|||+|+.+++|.+++.+..+...+..+.......|+..++++++.+++.+...+.+....
T Consensus 1081 ~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~~~ 1160 (1495)
T PLN03232 1081 DSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLRNG 1160 (1495)
T ss_pred HHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999999999999988888889999988877665443332222111100
Q ss_pred ---------------------------CccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEE
Q 037346 901 ---------------------------GIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHL 953 (1156)
Q Consensus 901 ---------------------------~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~V 953 (1156)
.......+++..++++||+.++.+.|+|++...+...++..||..|.|+|+||
T Consensus 1161 ~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nV 1240 (1495)
T PLN03232 1161 NAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDV 1240 (1495)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEE
Confidence 00011146788899999999999988876432222234557999999999999
Q ss_pred EEEEcCCCC---------------ceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccc
Q 037346 954 QVRYAPNLP---------------LVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPT 1018 (1156)
Q Consensus 954 sf~Y~~~~~---------------~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~ 1018 (1156)
+|+|+++.+ ++|+||||||||||+++|+|+|+|++|+|.|||+||+++++++||++|++|||||+
T Consensus 1241 sf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~ 1320 (1495)
T PLN03232 1241 HLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPV 1320 (1495)
T ss_pred EEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCe
Confidence 999976543 34669999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhccCCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCc
Q 037346 1019 MFEGTTRSNLDPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATA 1080 (1156)
Q Consensus 1019 LF~gTIr~Nl~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS 1080 (1156)
||+||||+||+|+++++|+|+|+||++|+++++|.++|+|||+. ||||||+|+|||||||||
T Consensus 1321 LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATS 1400 (1495)
T PLN03232 1321 LFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATA 1400 (1495)
T ss_pred eeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcc
Confidence 99999999999999999999999999999999999999999975 899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHHHhcc
Q 037346 1081 SVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAEYTSS 1154 (1156)
Q Consensus 1081 ~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~~~~~ 1154 (1156)
+||++||+.||++|++.+++||+|+||||++|+.+||||+|||+|+|+|+|+|+||+++++|.|++|+++++..
T Consensus 1401 aLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1401 SVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 99999999999999999999999999999999999999999999999999999999998778999999987643
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=8.5e-170 Score=1685.86 Aligned_cols=1141 Identities=33% Similarity=0.567 Sum_probs=950.7
Q ss_pred CCCCCccChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHhhccc------------------
Q 037346 2 VTPYSNAGLFSIRSFSWMGSLIALGNKRTLDLEDVPRLDCSDSIYGVSPVLQNKLEAVVGVA------------------ 63 (1156)
Q Consensus 2 ~~p~~~~~~~s~~~f~w~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------ 63 (1156)
.+||+++|++||++|+|++|++++||+++|+.+|||+++++++++.+.++|++.|+++..+.
T Consensus 201 ~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (1522)
T TIGR00957 201 PCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSKPK 280 (1522)
T ss_pred CCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHHHHHHHHHHHHHHHhhccccccccccccccccccc
Confidence 37899999999999999999999999999999999999999999999999999998763100
Q ss_pred -------------------ccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchhhHH
Q 037346 64 -------------------NRLTALRLAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEYEGYVL 124 (1156)
Q Consensus 64 -------------------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~~g~~l 124 (1156)
++.++++++++++++||+.++..++++++..++.+++|++++.+++++.++......|+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~ 360 (1522)
T TIGR00957 281 GSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFY 360 (1522)
T ss_pred ccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHH
Confidence 1123578999999999999999999999999999999999999999986543222222221
Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH-------------
Q 037346 125 -----------CLSERHWFFQVQQFGIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER------------- 180 (1156)
Q Consensus 125 -----------~~~~~~~~~~~~~~~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~------------- 180 (1156)
+++.++|.+...+++.++|.+++..+|+|+++++....++.++|+++|+|++|+++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~ 440 (1522)
T TIGR00957 361 TGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIWS 440 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 44567777888999999999999999999999999888899999999999999998
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----
Q 037346 181 -------ALLILYKKLGLASIATLLATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE----- 248 (1156)
Q Consensus 181 -------~~~ll~~~lg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e----- 248 (1156)
+++++|..+|+++++++++++++++++..+++...+.++++++.+|+|.+.++|+++|||+||+|+||
T Consensus 441 ~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~ 520 (1522)
T TIGR00957 441 APLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLD 520 (1522)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 45677889999999999888899999999999999999999999999999999999999999999999
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 249 ----LKKNETAWLKKSVYTEAMISFFCWGAPTFVSVVTFGSCILL--GIPLESGMILSALTTFKILQEPIYYLPESISMM 322 (1156)
Q Consensus 249 ----~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~ 322 (1156)
.|++|++..++..+...+..+.....|.++.+++|++|.+. ++.++++.+|+++++++.+..|+..+|..+..+
T Consensus 521 ~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~ 600 (1522)
T TIGR00957 521 KVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSI 600 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788887777766666555555567888788888888776 467999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCccccccCCCC-CCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHH
Q 037346 323 IQAKVPLDRIASFLCLEGLQTDVLEKMPRG-NSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSS 401 (1156)
Q Consensus 323 ~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~-~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKST 401 (1156)
.++++|++||++|++.++.+....+..... .....++++|++|+|+.. ++++|+|+||+|++|++++|+|||||||||
T Consensus 601 ~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKST 679 (1522)
T TIGR00957 601 VQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSS 679 (1522)
T ss_pred HHHHHHHHHHHHHHcCcccccccccccccCCCCCCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHH
Confidence 999999999999998765432211111101 112369999999999742 357999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCcEEEEcCeEEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCC
Q 037346 402 CLSCILGGVPKESGIIRLCGTKAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGI 481 (1156)
Q Consensus 402 ll~~i~g~~~~~~G~i~~~g~~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~ 481 (1156)
|+++|+|+++|++|+|.++|+++||||+||++++||+|||.||.++++++|++++++|++.++++.+|+||+|.+|++|.
T Consensus 680 Ll~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~ 759 (1522)
T TIGR00957 680 LLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGV 759 (1522)
T ss_pred HHHHHhCCCccCCcEEEECCEEEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh----cCCCEEEEEccCCCccccCCEEEEEeCCeE
Q 037346 482 NLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV----SSSKTVIYATHQVEFLPAADLILVIKDGKI 557 (1156)
Q Consensus 482 ~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~----~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i 557 (1156)
+|||||||||+||||+|++|+++|||||||+||+++++++++.+.. .+++|+|+|||+++.++.||+|++|++|++
T Consensus 760 ~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i 839 (1522)
T TIGR00957 760 NLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKI 839 (1522)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeE
Confidence 9999999999999999999999999999999999999999998753 467999999999999999999999999999
Q ss_pred EEccChHHHHhcCcchHHHHHhhhhhccCCCCCCC-CC---cccccccccCC-------CCCCCcccc---hh-cccc-c
Q 037346 558 TQAGKYSDILNSGTDFMELVGAHKQALSGLDSIDR-GP---VSERKSINKEN-------DGTSTTNEI---VN-KEEN-K 621 (1156)
Q Consensus 558 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~-------~~~~~~~~~---~~-~~~~-~ 621 (1156)
+++|+++++.+..+.+.++...+..........+. .+ .........+. ......... .. .... .
T Consensus 840 ~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (1522)
T TIGR00957 840 SEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSR 919 (1522)
T ss_pred EeeCCHHHHHhcchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccc
Confidence 99999999998777777766433211100000000 00 00000000000 000000000 00 0000 0
Q ss_pred C--CC---CcccccCccCcchhHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhcccccccc
Q 037346 622 N--FQ---SDDEAALPKGQLVQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDV 696 (1156)
Q Consensus 622 ~--~~---~~~~~~~~~~~~~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 696 (1156)
. .. ...+..........+|+++.|.+++.+|+.|+++.+. ..+.+++++.++.+++..+.++|+++|.+.....
T Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~ 998 (1522)
T TIGR00957 920 HHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIGL-FITFLSIFLFVCNHVSALASNYWLSLWTDDPMVN 998 (1522)
T ss_pred cccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 0 00 0000000112334566778899999999999998753 3334444555667778888999999887532111
Q ss_pred CCCCCchhhHHHHHH------------------HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchh
Q 037346 697 NPAVGASTLIIVYVG------------------AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQS 758 (1156)
Q Consensus 697 ~~~~~~~~~~~~~~~------------------~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~ 758 (1156)
........++.+|++ .+.++++++|++++++++++|++||+++|+|+|+|||+ .|+.
T Consensus 999 ~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s-----~Di~ 1073 (1522)
T TIGR00957 999 GTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFS-----KELD 1073 (1522)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHH-----HHHH
Confidence 111111122222221 46799999999999999999999999999999999999 8999
Q ss_pred hhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccc
Q 037346 759 AADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISG 838 (1156)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~G 838 (1156)
.+|..++..+..++..++.+++.++++++.+|+++++++|+++++++++++|.+..|++++.+.++++|+++++.|+++|
T Consensus 1074 ~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~G 1153 (1522)
T TIGR00957 1074 TVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLG 1153 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCC
Confidence 99999999999999999999999999888888888888888888889999999999999999999999999999999999
Q ss_pred hhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc--------------
Q 037346 839 STTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSITFAFSLAFLISVPNGIIH-------------- 904 (1156)
Q Consensus 839 i~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------- 904 (1156)
+.|||+||++++|.+++.+..+...++.+.....++|+..++++++.+++.++..+.+.. .+.++
T Consensus 1154 i~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~g~l~~~l~~~~~~ 1232 (1522)
T TIGR00957 1154 VSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAVIS-RHSLSAGLVGLSVSYSLQV 1232 (1522)
T ss_pred cHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887665443333222211 11111
Q ss_pred ---------hHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCC-------------
Q 037346 905 ---------PYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLP------------- 962 (1156)
Q Consensus 905 ---------~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~------------- 962 (1156)
...+++..++|++|+.++.+.++|++...+...++..||..|.|+|+||+|+|+++.+
T Consensus 1233 ~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~G 1312 (1522)
T TIGR00957 1233 TFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGG 1312 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCC
Confidence 1267889999999999999888775422223344567999999999999999976543
Q ss_pred --ceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCCCCHHHHH
Q 037346 963 --LVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEEHADEQIW 1040 (1156)
Q Consensus 963 --~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~~~deei~ 1040 (1156)
++++||||||||||+++|+|+|+|++|+|.|||+||+++++++||++|++|||||+||+||||+||||+++++|+|+|
T Consensus 1313 ekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~ 1392 (1522)
T TIGR00957 1313 EKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVW 1392 (1522)
T ss_pred CEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHH
Confidence 356699999999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred HHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCce
Q 037346 1041 EALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCT 1102 (1156)
Q Consensus 1041 ~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~T 1102 (1156)
+||++|+++++|.++|+|||+. ||||||+|+|||||||||+||++||+.||++|++.+++||
T Consensus 1393 ~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~T 1472 (1522)
T TIGR00957 1393 WALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCT 1472 (1522)
T ss_pred HHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 9999999999999999999975 8999999999999999999999999999999999999999
Q ss_pred EEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHHH
Q 037346 1103 VVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAEY 1151 (1156)
Q Consensus 1103 vI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~~ 1151 (1156)
||+||||++|+.+||||+|||+|+|+|+|+|+||+++ +|.|++|+++.
T Consensus 1473 vI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1473 VLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred EEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 9999999999999999999999999999999999986 69999999875
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.1e-165 Score=1638.07 Aligned_cols=1138 Identities=28% Similarity=0.454 Sum_probs=942.1
Q ss_pred CCCCCccChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHhhcccccCCccchHHHHHHHHHH
Q 037346 2 VTPYSNAGLFSIRSFSWMGSLIALGNKRTLDLEDVPRLDCSDSIYGVSPVLQNKLEAVVGVANRLTALRLAKVLFFSAWQ 81 (1156)
Q Consensus 2 ~~p~~~~~~~s~~~f~w~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 81 (1156)
.+||+++|+|||++|+|++|++++|++++|+.+|||+|+++++++.+.++|++.|+++.. +..++++|+++++++|++
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~--~~~~~~~L~~~l~~~~~~ 80 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELA--SAKKNPKLLNALRRCFFW 80 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHh--ccCCCChHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999998642 124568899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-cchhhHH-----------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 82 EILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAF-EYEGYVL-----------CLSERHWFFQVQQFGIRFRATLFAM 149 (1156)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~-~~~g~~l-----------~~~~~~~~~~~~~~~~~~r~~l~~~ 149 (1156)
.+++.+++.++.+++.+++|++++++++++.+.... ...++.+ +++.+++.|...+++.++|.++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~ 160 (1490)
T TIGR01271 81 RFVFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSL 160 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998532211 1122211 3455667778889999999999999
Q ss_pred HHHHHhcCCccccCCCCHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 150 IYNKGLTLSGQAKQGNTSGEIINLIAVDAER--------------------ALLILYKKLGLASIATLLATAIVMLANFP 209 (1156)
Q Consensus 150 i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~--------------------~~~ll~~~lg~~~l~~~~~~~~~~~~~~~ 209 (1156)
+|+|+++++....++.++|+++|+|++|+++ +++++|+.+|+++++|+++++++++++.+
T Consensus 161 iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~ 240 (1490)
T TIGR01271 161 IYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQAC 240 (1490)
T ss_pred HHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888889999999999999998 45788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 210 LGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE---------LKKNETAWLKKSVYTEAMISFFCWGAPTFVSV 280 (1156)
Q Consensus 210 ~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e---------~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (1156)
+++.+.+.++++++.+|+|++.++|+++|||+||+|+|| .|+.|++..++..+...+...+.+..|.++.+
T Consensus 241 ~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1490)
T TIGR01271 241 LGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVF 320 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 78889888888777666666666677888888
Q ss_pred HHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCccEE
Q 037346 281 VTFGSCILLGIPLESGMILSALTTFKILQEPIY-YLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSDTAIE 359 (1156)
Q Consensus 281 ~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~-~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~~~i~ 359 (1156)
++|++|.+.++ ++++.+|+++++|++++.|+. .+|..+..+.++.+|++||++||..++.+... . ......++
T Consensus 321 ~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~--~---~~~~~~i~ 394 (1490)
T TIGR01271 321 LSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLE--Y---NLTTTEVE 394 (1490)
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc--c---cCCCCceE
Confidence 99999987755 789999999999999999985 79999999999999999999999877643211 0 01123599
Q ss_pred EeeeEEEeCCC-------------------------------CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhC
Q 037346 360 IIDGSFSWDFS-------------------------------SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILG 408 (1156)
Q Consensus 360 ~~~~~f~~~~~-------------------------------~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g 408 (1156)
++|++|.|+.. ..+++|+|+||+|++|++++|+||||||||||+++|+|
T Consensus 395 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G 474 (1490)
T TIGR01271 395 MVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMG 474 (1490)
T ss_pred EecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 99999999531 01468999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEcCeEEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 409 GVPKESGIIRLCGTKAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 409 ~~~~~~G~i~~~g~~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
+++|++|+|.++|+++||+|+||++++||+|||+||.++++++|++++++|+|.++++.+|.||+|.+|++|.+||||||
T Consensus 475 ~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqk 554 (1490)
T TIGR01271 475 ELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQR 554 (1490)
T ss_pred CCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHH
Confidence 99999999999999999999999999999999999988888999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
|||+||||+|++|++|||||||||||+++++++++.++. .+++|+|+|||+++.+..||+|++|++|++++.|+++++
T Consensus 555 qRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l 634 (1490)
T TIGR01271 555 ARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSEL 634 (1490)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999999999999999987653 468999999999999988999999999999999999999
Q ss_pred HhcCcchHHHHHhhhhhcc--------C---------CC--------C-C------CCCCcccccc--------------
Q 037346 567 LNSGTDFMELVGAHKQALS--------G---------LD--------S-I------DRGPVSERKS-------------- 600 (1156)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~--------~---------~~--------~-~------~~~~~~~~~~-------------- 600 (1156)
...+..+.+.+.......+ . .+ + . ++.+......
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1490)
T TIGR01271 635 QAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARK 714 (1490)
T ss_pred HhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8765555554421000000 0 00 0 0 0000000000
Q ss_pred ---------c----c-cC---CCC----------------CCCccc-----------c-------hhc--ccccCCC---
Q 037346 601 ---------I----N-KE---NDG----------------TSTTNE-----------I-------VNK--EENKNFQ--- 624 (1156)
Q Consensus 601 ---------~----~-~~---~~~----------------~~~~~~-----------~-------~~~--~~~~~~~--- 624 (1156)
. . .. +.. ....+. . ... .+.....
T Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1490)
T TIGR01271 715 FSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQT 794 (1490)
T ss_pred cccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccc
Confidence 0 0 00 000 000000 0 000 0000000
Q ss_pred ---------------Cc---------cc----------ccCccCcchhHHHHhcCcccHHHHHHHHHHhccchHHHHHHH
Q 037346 625 ---------------SD---------DE----------AALPKGQLVQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILL 670 (1156)
Q Consensus 625 ---------------~~---------~~----------~~~~~~~~~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~ 670 (1156)
.+ .+ ..........+|++..|.++|++|+.|+++.+++.++.++++
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~ 874 (1490)
T TIGR01271 795 SFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCL 874 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHH
Confidence 00 00 000001234456677899999999999998765555555556
Q ss_pred HHHHHHHHHhhhhhhhhhccccc------cccCC------------CCCchhhHHHHHH------------------HHH
Q 037346 671 AQIIFQIFQIGSNYWMAWATPVA------KDVNP------------AVGASTLIIVYVG------------------AGY 714 (1156)
Q Consensus 671 ~~~~~~~~~~~~~~~l~~~~~~~------~~~~~------------~~~~~~~~~~~~~------------------~~~ 714 (1156)
+.++.+++..+.++|+.+|.... ..... .....+++++|.+ .+.
T Consensus 875 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1490)
T TIGR01271 875 VIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLL 954 (1490)
T ss_pred HHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777888899999998765311 00000 0011111222211 456
Q ss_pred HHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 715 KTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLI 794 (1156)
Q Consensus 715 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 794 (1156)
+++.++|.+++++++++|++||+++|+|+++|||+ .|+..+|..++..+..++..++.+++.++++++.+|++++
T Consensus 955 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs-----~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l 1029 (1490)
T TIGR01271 955 TVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFT-----KDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFI 1029 (1490)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999 8999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037346 795 VFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAME 874 (1156)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (1156)
+++|+++++++++++|.+.+|++++.+..+++|+++++.|+++|+.|||+|++++++.+++.+..+...+..+.....++
T Consensus 1030 ~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1109 (1490)
T TIGR01271 1030 AAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLR 1109 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHc---CCC------------------ccchHHHHHHHhHHHHHHHHhhcCCCCCcccc
Q 037346 875 WLRFCIDMLSSITFAFSLAFLISV---PNG------------------IIHPYKNLERKIISVERILQCACIPSEPALVI 933 (1156)
Q Consensus 875 ~~~~~l~~~~~~~~~~~~~~~~~~---~~~------------------~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~ 933 (1156)
|+..++++++.+.+..++.+.+.. ..+ .+....+++..+.+++|+.+|.+.|+|+....
T Consensus 1110 wl~~~~~~i~~~~~~~~~~l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~ 1189 (1490)
T TIGR01271 1110 WFQMRIDIIFVFFFIAVTFIAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPS 1189 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Confidence 999998886654333222211110 000 11112577889999999999998887753211
Q ss_pred c--------------CCCCCCCCCCCCeEEEEEEEEEEcCCCCc---------------eeeCCCCCCHHHHHHHHhhcc
Q 037346 934 E--------------ATKPNNSRPSHGEVNIRHLQVRYAPNLPL---------------VLRGRTGSGKSTLIQTLFRIV 984 (1156)
Q Consensus 934 ~--------------~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~~---------------vL~G~SGsGKSTL~~lL~rl~ 984 (1156)
+ ...+++.||..|.|+|+||+|+|+++.++ +|+||||||||||+++|+|++
T Consensus 1190 ~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~ 1269 (1490)
T TIGR01271 1190 GGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLL 1269 (1490)
T ss_pred ccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhc
Confidence 1 11234569999999999999999765443 455999999999999999999
Q ss_pred cCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc--
Q 037346 985 ESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ-- 1062 (1156)
Q Consensus 985 ~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~-- 1062 (1156)
+ ++|+|+|||+||+++++++||++|++|||||+||+||||+||||+++++|+++|+||+++++++++.++|+|||+.
T Consensus 1270 ~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~ 1348 (1490)
T TIGR01271 1270 S-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLV 1348 (1490)
T ss_pred C-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccc
Confidence 8 7999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred ----------------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcE
Q 037346 1063 ----------------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGL 1126 (1156)
Q Consensus 1063 ----------------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ 1126 (1156)
||||||+|+|||||||||+||++||+.||++|++.+++||||+||||++++.+||||+|||+|+
T Consensus 1349 e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ 1428 (1490)
T TIGR01271 1349 DGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSS 1428 (1490)
T ss_pred cCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecChhHHhcCCCChHHHHHHHHhcc
Q 037346 1127 IKEYDSPTKLLENKSSSFAQLVAEYTSS 1154 (1156)
Q Consensus 1127 IvE~G~~~eLl~~~~g~f~~l~~~~~~~ 1154 (1156)
|+|+|+|++|++ ++|.|++|++++.+.
T Consensus 1429 ivE~g~p~~Ll~-~~~~f~~l~~~~~~~ 1455 (1490)
T TIGR01271 1429 VKQYDSIQKLLN-ETSLFKQAMSAADRL 1455 (1490)
T ss_pred EEEeCCHHHHHc-CCcHHHHHHHHhChh
Confidence 999999999997 589999999977643
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.8e-157 Score=1561.59 Aligned_cols=1140 Identities=29% Similarity=0.472 Sum_probs=930.8
Q ss_pred CCCCCccChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCCCCchhhHHHHHHHHHHHh----------hcc---------
Q 037346 2 VTPYSNAGLFSIRSFSWMGSLIALGNKRTLDLEDVPRLDCSDSIYGVSPVLQNKLEAV----------VGV--------- 62 (1156)
Q Consensus 2 ~~p~~~~~~~s~~~f~w~~~l~~~g~~~~l~~~dl~~l~~~~~~~~~~~~~~~~~~~~----------~~~--------- 62 (1156)
..||+++||+.++++.|++|.+.++.+..|+.+|||+...+.++..+..++-+..++. .+.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (1560)
T PTZ00243 59 PVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLDAS 138 (1560)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeecccc
Confidence 4689999999999999999999999999999999999998888877776665544331 100
Q ss_pred ----------------------------------c---------------------------------------------
Q 037346 63 ----------------------------------A--------------------------------------------- 63 (1156)
Q Consensus 63 ----------------------------------~--------------------------------------------- 63 (1156)
+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (1560)
T PTZ00243 139 SRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSSTG 218 (1560)
T ss_pred ccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeecccc
Confidence 0
Q ss_pred --------ccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchhhHH-----------
Q 037346 64 --------NRLTALRLAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEYEGYVL----------- 124 (1156)
Q Consensus 64 --------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~~g~~l----------- 124 (1156)
..++..++++++++++|+.++..++++++..++.+++|++++.++++++++......|+++
T Consensus 219 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~~ 298 (1560)
T PTZ00243 219 SVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLIQ 298 (1560)
T ss_pred cccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHH
Confidence 0134458999999999999999999999999999999999999999986543221122211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CCCHHHHHHHHHHHHHH--------------------HH
Q 037346 125 CLSERHWFFQVQQFGIRFRATLFAMIYNKGLTLSGQAKQ--GNTSGEIINLIAVDAER--------------------AL 182 (1156)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~r~~l~~~i~~k~l~l~~~~~~--~~~~g~i~nl~s~D~~~--------------------~~ 182 (1156)
+++.+++.+...+.+.++|.++...+|+|+++++..... +.++|+++|+|++|+++ ++
T Consensus 299 ~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~~~ 378 (1560)
T PTZ00243 299 SVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLLSI 378 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677788899999999999999999999999876654 56899999999999998 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---------HHHHH
Q 037346 183 LILYKKLGLASIATLLATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE---------LKKNE 253 (1156)
Q Consensus 183 ~ll~~~lg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e---------~r~~e 253 (1156)
++||..+|+++++|+++++++++++.++++...+.++++++.+|+|++.++|+++|||+||+++|| .|+.|
T Consensus 379 ~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~E 458 (1560)
T PTZ00243 379 LLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARE 458 (1560)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999999999999999999999999999999 78899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 254 TAWLKKSVYTEAMISFFCWGAPTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIA 333 (1156)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~ 333 (1156)
++.+++..+..++..++.+..|.++.+++|++|.+.|+.||++.+||++++|+.++.|+..+|..+..+.++.+|++||+
T Consensus 459 l~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~ 538 (1560)
T PTZ00243 459 LRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRIS 538 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888887777777778898888899999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCcc------cc-----------c----------------cCC-------------------------CCCCC
Q 037346 334 SFLCLEGLQTD------VL-----------E----------------KMP-------------------------RGNSD 355 (1156)
Q Consensus 334 ~fl~~~~~~~~------~~-----------~----------------~~~-------------------------~~~~~ 355 (1156)
+||+.+|.... .. . ..+ .....
T Consensus 539 ~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (1560)
T PTZ00243 539 TFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPS 618 (1560)
T ss_pred HHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccc
Confidence 99987652100 00 0 000 00001
Q ss_pred ccEEEeeeEEEeCCC-------------------------------------CCCCccccceEEeeCCeEEEEEcCCCCC
Q 037346 356 TAIEIIDGSFSWDFS-------------------------------------SPNPTLRNINLKVFHGMRVAVCGTVGSG 398 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~-------------------------------------~~~~~l~~i~l~i~~g~~~~ivG~~GsG 398 (1156)
..+.++|++|.|+.. +++++|+|+||+|++|++++|+||||||
T Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsG 698 (1560)
T PTZ00243 619 PSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSG 698 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCc
Confidence 246677777765310 1346899999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCcEEEEcCeEEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCcccccc
Q 037346 399 KSSCLSCILGGVPKESGIIRLCGTKAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGE 478 (1156)
Q Consensus 399 KSTll~~i~g~~~~~~G~i~~~g~~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~ 478 (1156)
||||+++|+|+++|++|+|.++++++||||+||++++||+|||.|+.+++.++|++++++|+++++++.+|+|++|.+|+
T Consensus 699 KSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~ 778 (1560)
T PTZ00243 699 KSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEIGE 778 (1560)
T ss_pred HHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHhcC
Confidence 99999999999999999999999999999999999999999999998888889999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeCCe
Q 037346 479 RGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKDGK 556 (1156)
Q Consensus 479 ~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~G~ 556 (1156)
+|.+|||||||||+||||+|++|++||||||||+||+++++++++.++. .+|+|+|++||+++.++.||+|++|++|+
T Consensus 779 ~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~ 858 (1560)
T PTZ00243 779 KGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGR 858 (1560)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999887643 56899999999999998999999999999
Q ss_pred EEEccChHHHHhcCcchHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcc
Q 037346 557 ITQAGKYSDILNSGTDFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQL 636 (1156)
Q Consensus 557 i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (1156)
++++|+++++++.. .+.++........+..+...... ....................... ................+
T Consensus 859 i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 935 (1560)
T PTZ00243 859 VEFSGSSADFMRTS-LYATLAAELKENKDSKEGDADAE-VAEVDAAPGGAVDHEPPVAKQEG-NAEGGDGAALDAAAGRL 935 (1560)
T ss_pred EEEecCHHHHHhCh-HHHHHHHhhcccccccccccccc-ccccccccccccccccccccccc-ccccccccccccccchh
Confidence 99999999998643 35444432111100000000000 00000000000000000000000 00000000001111234
Q ss_pred hhHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHH-----
Q 037346 637 VQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVG----- 711 (1156)
Q Consensus 637 ~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----- 711 (1156)
..+|++..|.++|.+|+.|++..++...+.+++++.++.+++..+.++|+++|........ ...++.+|++
T Consensus 936 ~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~~~----~~~~l~~y~~~~~~~ 1011 (1560)
T PTZ00243 936 MTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFKLS----AATYLYVYLGIVLLG 1011 (1560)
T ss_pred hhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC----cccHHHHHHHHHHHH
Confidence 5566777899999999999998776555545555556667788889999998875321111 1112222211
Q ss_pred -------------HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHH
Q 037346 712 -------------AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQL 778 (1156)
Q Consensus 712 -------------~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~ 778 (1156)
.+.++++++|++++++++++|+.|||++++|+|+|||+ .|+..+|..++..+..++..++.+
T Consensus 1012 ~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s-----~Di~~id~~l~~~l~~~~~~~~~~ 1086 (1560)
T PTZ00243 1012 TFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFS-----RDIDILDNTLPMSYLYLLQCLFSI 1086 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577889999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHH
Q 037346 779 LGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKL 858 (1156)
Q Consensus 779 ~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~ 858 (1156)
++.++++++.+|.++++++|++++++.+..+|.+..++++|....+++|+++++.|+++|+.|||+|+.++++.+++.+.
T Consensus 1087 i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~ 1166 (1560)
T PTZ00243 1087 CSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRR 1166 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHH
Confidence 99999988888887777888887888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCCC-----------------------ccchHHHHHHH
Q 037346 859 IDEYSRPKFHIAGAMEWLRFCIDMLSSITFAFSLAFLI---SVPNG-----------------------IIHPYKNLERK 912 (1156)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~-----------------------~~~~~~~~~~~ 912 (1156)
++.+.++.+......+|+..+++++..+...+++.+.+ ....+ ......+++..
T Consensus 1167 ~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~ 1246 (1560)
T PTZ00243 1167 LDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEAD 1246 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988776554332221111 00010 01112578899
Q ss_pred hHHHHHHHHhhc-CCCCCcccc-----------------------cCCCCC---CCCCCCCeEEEEEEEEEEcCCCCc--
Q 037346 913 IISVERILQCAC-IPSEPALVI-----------------------EATKPN---NSRPSHGEVNIRHLQVRYAPNLPL-- 963 (1156)
Q Consensus 913 ~~s~~Ri~~~~~-~~~e~~~~~-----------------------~~~~~~---~~~p~~g~I~~~~Vsf~Y~~~~~~-- 963 (1156)
+.+++|+.++.+ .|+|+.... +...++ +.||..|.|+|+||+|+|+++.++
T Consensus 1247 ~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL 1326 (1560)
T PTZ00243 1247 MNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVL 1326 (1560)
T ss_pred HHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCcee
Confidence 999999999986 343321100 001111 235567899999999999766543
Q ss_pred -------------eeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCC
Q 037346 964 -------------VLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDP 1030 (1156)
Q Consensus 964 -------------vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~ 1030 (1156)
+|+||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||+|
T Consensus 1327 ~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp 1406 (1560)
T PTZ00243 1327 RGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDP 1406 (1560)
T ss_pred ecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCc
Confidence 4559999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccC-CCEEEEecCCcCCCHHHHHHHH
Q 037346 1031 LEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKK-SKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1031 ~~~~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~-~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
+++++|+|||+||++|+++++|.++|+|||+. |||||++ |+|||||||||+||++||+.||
T Consensus 1407 ~~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq 1486 (1560)
T PTZ00243 1407 FLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQ 1486 (1560)
T ss_pred ccCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHH
Confidence 98999999999999999999999999999975 8999996 8999999999999999999999
Q ss_pred HHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHHHhc
Q 037346 1092 QTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAEYTS 1153 (1156)
Q Consensus 1092 ~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~~~~ 1153 (1156)
++|++.+++||||+||||++|+.+||+|+|||+|+|+|+|+|+||+++++|.|++|++++.+
T Consensus 1487 ~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~ 1548 (1560)
T PTZ00243 1487 ATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGR 1548 (1560)
T ss_pred HHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 99999999999999999999999999999999999999999999998778999999987654
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.1e-143 Score=1307.73 Aligned_cols=1006 Identities=22% Similarity=0.281 Sum_probs=737.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHH
Q 037346 125 CLSERHWFFQVQQFGIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALL 183 (1156)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ 183 (1156)
.+...+|.+...|+..++|..+...+.+|...| +|.+.+|++.+.++.|+++ ++.
T Consensus 89 ~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~----fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~i 164 (1228)
T KOG0055|consen 89 FIQVSCWMRTGERQTARIRSKYLKAILRQDIGW----FDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFV 164 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccce----eecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334567778889999999998888888876655 4556669999999999988 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-----HHHHHHHH
Q 037346 184 ILYKKLGLASIATLLATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK-----KNETAWLK 258 (1156)
Q Consensus 184 ll~~~lg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r-----~~e~~~~~ 258 (1156)
+-+..-...+++++.+.+++......+++.+.+...+.++...+.-++++|++.+||+|-+|+.|.+ ..+++..+
T Consensus 165 i~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~ 244 (1228)
T KOG0055|consen 165 IGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENAL 244 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHH
Confidence 1111111233444555555566666777878888888888889999999999999999999999833 22333333
Q ss_pred HHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 259 KSVYTEAMISFF------CWGAPTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRI 332 (1156)
Q Consensus 259 ~~~~~~~~~~~~------~~~~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri 332 (1156)
+.....++...+ ++........+|||..++..+..++|++++++..+......+.+..+.+..+..|++|+.+|
T Consensus 245 k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I 324 (1228)
T KOG0055|consen 245 KFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRI 324 (1228)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHH
Confidence 333333322211 12223345577888777777889999999999888888899999999999999999999999
Q ss_pred HHHhccCCC-CccccccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC
Q 037346 333 ASFLCLEGL-QTDVLEKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP 411 (1156)
Q Consensus 333 ~~fl~~~~~-~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~ 411 (1156)
++.++..+. +.............+.|+|+||+|+||.+++.++|+|+||+|++|++++|||||||||||++++|.|+|+
T Consensus 325 ~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd 404 (1228)
T KOG0055|consen 325 FETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD 404 (1228)
T ss_pred HHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC
Confidence 999987543 2222122233345678999999999999988999999999999999999999999999999999999999
Q ss_pred CCCcEEEEcC-------------eEEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccc
Q 037346 412 KESGIIRLCG-------------TKAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIG 477 (1156)
Q Consensus 412 ~~~G~i~~~g-------------~~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~ 477 (1156)
|++|+|.+|| ++|.|+|+|.+|++||+|||.||++ .+.++..++++.+...+++..+|+|++|.+|
T Consensus 405 P~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vg 484 (1228)
T KOG0055|consen 405 PTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVG 484 (1228)
T ss_pred CCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhccccc
Confidence 9999999999 3799999999999999999999985 5788899999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCe
Q 037346 478 ERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGK 556 (1156)
Q Consensus 478 ~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~ 556 (1156)
|+|.+|||||||||||||||.++|+||||||||||||+++++.+.+.+-+ .+|+|.|+|+||++++++||+|++|++|+
T Consensus 485 e~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~ 564 (1228)
T KOG0055|consen 485 ERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGK 564 (1228)
T ss_pred CCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCE
Confidence 99999999999999999999999999999999999999998877555533 68999999999999999999999999999
Q ss_pred EEEccChHHHHhcCcchHHHHHhhhhhccCCC-CCCCCCcccccccccCCCCCCCcccchhcccccCCC-CcccccCccC
Q 037346 557 ITQAGKYSDILNSGTDFMELVGAHKQALSGLD-SIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQ-SDDEAALPKG 634 (1156)
Q Consensus 557 i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 634 (1156)
|+|.|+|+||++..+.|.++++.+.......+ +.++..........+.+. ............... ...+.+....
T Consensus 565 IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~---~~~~~~~~~~~~~~~~~~~~~e~~~~ 641 (1228)
T KOG0055|consen 565 IVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSS---SSPSLSRGSNRSNLLSVKPEGEDPEE 641 (1228)
T ss_pred EEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhcccccc---ccccccCCcccccccccccccccccc
Confidence 99999999999988999999987754432111 000000000000000000 000000000000000 0000000000
Q ss_pred cchhHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHH----HHhhhhhhhhhcc-ccccccCCCCCchhhHH--
Q 037346 635 QLVQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQI----FQIGSNYWMAWAT-PVAKDVNPAVGASTLII-- 707 (1156)
Q Consensus 635 ~~~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~-- 707 (1156)
.. ..+. ...++....++.+. .+.++.+-.+++++... +.......+.... ...+........+.++.
T Consensus 642 ~~-~~~~---~~~s~~~i~k~~~p--e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~ 715 (1228)
T KOG0055|consen 642 PV-SEED---EKVSFWRIFKLNKP--EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLG 715 (1228)
T ss_pred cc-cccc---ccccHHHHHHhccc--hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Confidence 00 0111 12222222222211 11111111111111111 1111111111111 00000000000111111
Q ss_pred --------------HHHHHHHHHHHHHHHHHHHHhcccccccccc--ccccchhhhhcccccccchhhhcccchHHHHHH
Q 037346 708 --------------VYVGAGYKTATQLFNKMHVCIFRAPMYFFDS--TPSGRILNRVSENVKWADQSAADMDIPYDIGAF 771 (1156)
Q Consensus 708 --------------~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~ 771 (1156)
.+...|.+...++|.++|+++++++++|||. |. |.|.+|+. .|...+...+...+..+
T Consensus 716 l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa-----~Da~~vr~~v~~rl~~v 789 (1228)
T KOG0055|consen 716 LGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLA-----TDASNVRAAVGDRLSLV 789 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHh-----cchHHHHHHHHHHHHHH
Confidence 0111688999999999999999999999997 56 99999999 89999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHH
Q 037346 772 AFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRF 851 (1156)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~ 851 (1156)
++.+..++..+++.++++|.++++++.+.++.......+.+......+..............|++++++||++|++|++|
T Consensus 790 v~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~ 869 (1228)
T KOG0055|consen 790 VQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKF 869 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHH
Confidence 99999999999999999999987755444444333333333333333344444556778899999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHcCCCccchHH
Q 037346 852 RDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSITFAFSLAF------------------------LISVPNGIIHPYK 907 (1156)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~ 907 (1156)
.+.|.+.++...+..++............+.+..+..+++..+ .........+..+
T Consensus 870 ~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~P 949 (1228)
T KOG0055|consen 870 MELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAP 949 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 9999999988877665433222211111111111111110000 0000001122236
Q ss_pred HHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcC----------------CCCceeeCCCCC
Q 037346 908 NLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAP----------------NLPLVLRGRTGS 971 (1156)
Q Consensus 908 ~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~----------------~~~~vL~G~SGs 971 (1156)
++.++..|+.+++++++.++.-+...+ ......+.+|+|+|+||+|+||. |..++|+|||||
T Consensus 950 d~~ka~~Aa~~iF~i~dr~~~i~~~~~--~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGs 1027 (1228)
T KOG0055|consen 950 DISKAKIAAGSIFEILDRKPTIDPDST--SGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGS 1027 (1228)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCC--CCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCC
Confidence 788889999999999987664322111 11111235799999999999962 233578899999
Q ss_pred CHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCC-CCCCHHHHHHHHHHcCCCh
Q 037346 972 GKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPL-EEHADEQIWEALDKCQLGD 1050 (1156)
Q Consensus 972 GKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~-~~~~deei~~al~~~~l~~ 1050 (1156)
||||++.+|.|||+|.+|.|.|||+||+++++++||++||+|.|||.||++||||||.++ ...+++||.+|++.|++|+
T Consensus 1028 GKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~ 1107 (1228)
T KOG0055|consen 1028 GKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHN 1107 (1228)
T ss_pred CHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHH
Confidence 999999999999999999999999999999999999999999999999999999999998 4568999999999999999
Q ss_pred HHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCccc
Q 037346 1051 EVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITS 1112 (1156)
Q Consensus 1051 ~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~t 1112 (1156)
||.++|+||||. ||||+|||+|||||||||+||.++|+.||++|++...++|+|+|||||+|
T Consensus 1108 FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLST 1187 (1228)
T KOG0055|consen 1108 FISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLST 1187 (1228)
T ss_pred HHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhh
Confidence 999999999986 89999999999999999999999999999999999999999999999999
Q ss_pred ccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHHHh
Q 037346 1113 VLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAEYT 1152 (1156)
Q Consensus 1113 i~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~~~ 1152 (1156)
|++||.|.|+++|+|+|+|||++|++ ++|.|++|++.+.
T Consensus 1188 IqnaD~I~Vi~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1188 IQNADVIAVLKNGKVVEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred hhcCCEEEEEECCEEEecccHHHHHh-CCCchHHHhhhcc
Confidence 99999999999999999999999998 6899999998764
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.4e-124 Score=1236.54 Aligned_cols=1072 Identities=18% Similarity=0.207 Sum_probs=736.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-hh-hHH-----HHHHHHHHHHHHHHHHHHH
Q 037346 71 LAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY-EG-YVL-----CLSERHWFFQVQQFGIRFR 143 (1156)
Q Consensus 71 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~-~g-~~l-----~~~~~~~~~~~~~~~~~~r 143 (1156)
+++...+.+++.+++++++.++..++..+.|++++.+++.+........ .. +++ .++.....+...+++.++.
T Consensus 50 ~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 129 (1466)
T PTZ00265 50 PFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGENVNDIIFSLVLIGIFQFILSFISSFCMDVVTTKIL 129 (1466)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344567778888889999999999999999999997642211111 11 111 2222233345677888899
Q ss_pred HHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHH-HHHHHHHHHHHHHHHHH
Q 037346 144 ATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLI-LYKKLGLASIATLLATA 201 (1156)
Q Consensus 144 ~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~l-l~~~lg~~~l~~~~~~~ 201 (1156)
..++..+|+++++++...+++.+.|++++.++.|++. ++++ ++..+. .+++.+++++
T Consensus 130 ~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~-Lalv~l~~~p 208 (1466)
T PTZ00265 130 KTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNAR-LTLCITCVFP 208 (1466)
T ss_pred HHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHH
Confidence 9999999999999999999999999999999999876 0000 011110 1122222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH---HHH--HHHHH----HHHHHHHHHHHHHH
Q 037346 202 IVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK---KNE--TAWLK----KSVYTEAMISFFCW 272 (1156)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r---~~e--~~~~~----~~~~~~~~~~~~~~ 272 (1156)
+++++...+.+...+..++..+..++..+.+.|.++||++||.|+.|.+ +-+ ..... +.....++...+..
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~ 288 (1466)
T PTZ00265 209 LIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMIN 288 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445556666667777777778889999999999999999999811 111 11111 11111121111111
Q ss_pred --HHHHHHHHHHHHHHHHhCC--------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 037346 273 --GAPTFVSVVTFGSCILLGI--------PLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQ 342 (1156)
Q Consensus 273 --~~~~~~~~~~f~~~~~~~~--------~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~ 342 (1156)
.....+.++|||.+.+..+ .++++.+++++........++..+.+.+..+..+.+|++||.++++.++..
T Consensus 289 ~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~ 368 (1466)
T PTZ00265 289 GFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLV 368 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 1122345678888877653 578899888776666656666777778899999999999999999875432
Q ss_pred ccccccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEc-C
Q 037346 343 TDVLEKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLC-G 421 (1156)
Q Consensus 343 ~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~-g 421 (1156)
+......... ....|+++|++|+|+.+++.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++ |
T Consensus 369 ~~~~~~~~~~-~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g 447 (1466)
T PTZ00265 369 ENNDDGKKLK-DIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDS 447 (1466)
T ss_pred CCCCCCccCC-CCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCC
Confidence 2111111111 1236999999999985444579999999999999999999999999999999999999999999994 4
Q ss_pred -------------eEEEEecCCcCCCccHHHHhhcCCC------------------------------------------
Q 037346 422 -------------TKAYVAQSPWIQSGKIEENILFGKE------------------------------------------ 446 (1156)
Q Consensus 422 -------------~~~~v~Q~~~~~~~ti~eni~~~~~------------------------------------------ 446 (1156)
+++||+|+|.+|++||+|||.+|..
T Consensus 448 ~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (1466)
T PTZ00265 448 HNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSN 527 (1466)
T ss_pred cchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhccc
Confidence 2699999999999999999999741
Q ss_pred ----------------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCC
Q 037346 447 ----------------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPF 510 (1156)
Q Consensus 447 ----------------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~ 510 (1156)
.+++++.++++.+++++++..+|+|++|.+|++|.+|||||||||+||||++++|+||||||||
T Consensus 528 ~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpT 607 (1466)
T PTZ00265 528 TTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEAT 607 (1466)
T ss_pred ccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 2346778888899999999999999999999999999999999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHhc---CCCEEEEEccCCCccccCCEEEEEeCC--------------------------------
Q 037346 511 SPVDDHTGAHLFKFCWVS---SSKTVIYATHQVEFLPAADLILVIKDG-------------------------------- 555 (1156)
Q Consensus 511 s~lD~~~~~~i~~~~~~~---~~~tvi~vtH~~~~~~~~d~i~~l~~G-------------------------------- 555 (1156)
|+||+.+++.+.+.+... +|+|+|+|||+++.+..||+|++|++|
T Consensus 608 SaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 687 (1466)
T PTZ00265 608 SSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNN 687 (1466)
T ss_pred cccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccccccccccccccccc
Confidence 999999999988776542 489999999999999899999999986
Q ss_pred ---------------eEEEccChHHHHh-cCcchHHHHHhhhhhccCCC-C-CCCCCcccccccccCCCCC---CCcccc
Q 037346 556 ---------------KITQAGKYSDILN-SGTDFMELVGAHKQALSGLD-S-IDRGPVSERKSINKENDGT---STTNEI 614 (1156)
Q Consensus 556 ---------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~---~~~~~~ 614 (1156)
+|+|+|+|+|+++ ..+.|..++..+........ . .+................. ......
T Consensus 688 ~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (1466)
T PTZ00265 688 NNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDPDEMNGNS 767 (1466)
T ss_pred ccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccccccccccccccccccccc
Confidence 5999999999997 57889888866533211100 0 0000000000000000000 000000
Q ss_pred hhcccc-c--C-CCC--cc-cccCccCcchhHHH----HhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhh
Q 037346 615 VNKEEN-K--N-FQS--DD-EAALPKGQLVQEEE----REKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSN 683 (1156)
Q Consensus 615 ~~~~~~-~--~-~~~--~~-~~~~~~~~~~~~e~----~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1156)
...... . . ... +. ............++ .......+..+++++.......+ +.+++.++..++....+
T Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 845 (1466)
T PTZ00265 768 KHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVT--IIALSILVAGGLYPVFA 845 (1466)
T ss_pred cccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 000000 0 0 000 00 00000000000000 00011112223333332221111 11112222222222233
Q ss_pred hhhhhcccccccc---CCCCCch-h-hHHH------------HH--HHHHHHHHHHHHHHHHHhcccccccccc--cccc
Q 037346 684 YWMAWATPVAKDV---NPAVGAS-T-LIIV------------YV--GAGYKTATQLFNKMHVCIFRAPMYFFDS--TPSG 742 (1156)
Q Consensus 684 ~~l~~~~~~~~~~---~~~~~~~-~-~~~~------------~~--~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G 742 (1156)
+.++.+.+..... ......+ . ++++ |+ ..+.++..++|.++|++++++|++||++ +++|
T Consensus 846 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G 925 (1466)
T PTZ00265 846 LLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPG 925 (1466)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHH
Confidence 3322221100000 0000000 0 0000 00 1567889999999999999999999986 8899
Q ss_pred chhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Q 037346 743 RILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYITS--TRELSRL 820 (1156)
Q Consensus 743 ~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~--~~~~~~~ 820 (1156)
++++|++ .|+..+...+...+..++..++.+++.++++++++|.++++++|++++.........+. .++.++.
T Consensus 926 ~l~srl~-----~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1466)
T PTZ00265 926 LLSAHIN-----RDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKK 1000 (1466)
T ss_pred HHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999 78878877777778888888888888889999999998877666544433222111111 1111111
Q ss_pred -------------HhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 821 -------------IGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSIT 887 (1156)
Q Consensus 821 -------------~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 887 (1156)
..+..+...+.++|++.|+++||+|+.|+++.++|.+..+...+..........++......+..+.
T Consensus 1001 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1080 (1466)
T PTZ00265 1001 EINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFI 1080 (1466)
T ss_pred hccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223455788999999999999999999999999999988777665544333222222222111111
Q ss_pred HHHHHH----------------------HHH--HcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCC-CCCC
Q 037346 888 FAFSLA----------------------FLI--SVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKP-NNSR 942 (1156)
Q Consensus 888 ~~~~~~----------------------~~~--~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~-~~~~ 942 (1156)
.++++. +++ ...........++..+..+.+|+.++++.+++.+........ ....
T Consensus 1081 ~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~ 1160 (1466)
T PTZ00265 1081 NSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKN 1160 (1466)
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCC
Confidence 000000 000 001112223367788899999999998876543211011000 0011
Q ss_pred CCCCeEEEEEEEEEEcC--CCC--------------ceeeCCCCCCHHHHHHHHhhcccC--------------------
Q 037346 943 PSHGEVNIRHLQVRYAP--NLP--------------LVLRGRTGSGKSTLIQTLFRIVES-------------------- 986 (1156)
Q Consensus 943 p~~g~I~~~~Vsf~Y~~--~~~--------------~vL~G~SGsGKSTL~~lL~rl~~p-------------------- 986 (1156)
+..|.|+|+||+|+|+. +.+ ++|+|+||||||||+++|+|||+|
T Consensus 1161 ~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~ 1240 (1466)
T PTZ00265 1161 DIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQ 1240 (1466)
T ss_pred CCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccc
Confidence 23578999999999962 222 457799999999999999999999
Q ss_pred ----------------------------------CCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC
Q 037346 987 ----------------------------------TAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE 1032 (1156)
Q Consensus 987 ----------------------------------~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~ 1032 (1156)
++|+|+|||+||+++++++||++||||||||+||+|||||||.++.
T Consensus 1241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~ 1320 (1466)
T PTZ00265 1241 DYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGK 1320 (1466)
T ss_pred ccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCC
Confidence 6999999999999999999999999999999999999999999985
Q ss_pred -CCCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHHHHHHHH
Q 037346 1033 -EHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATDNQIQQT 1093 (1156)
Q Consensus 1033 -~~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~ 1093 (1156)
+++|+||++|++.|++++||.++|+||||. ||||+|+|+|||||||||+||++||+.|+++
T Consensus 1321 ~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~ 1400 (1466)
T PTZ00265 1321 EDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKT 1400 (1466)
T ss_pred CCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH
Confidence 478999999999999999999999999975 8999999999999999999999999999999
Q ss_pred HHHhc--CCceEEEeecCcccccccCEEEEEeC----cEEe-eecChhHHhcCCCChHHHHHHHH
Q 037346 1094 LRQHF--SDCTVVTIAHRITSVLDSAMVLLLNH----GLIK-EYDSPTKLLENKSSSFAQLVAEY 1151 (1156)
Q Consensus 1094 l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~----G~Iv-E~G~~~eLl~~~~g~f~~l~~~~ 1151 (1156)
|++.. +++|+|+||||++++++||+|+||++ |+++ |.|+|+||+++++|.|++||+.+
T Consensus 1401 L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1401 IVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 99884 69999999999999999999999999 9955 99999999975589999999865
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.3e-78 Score=700.29 Aligned_cols=434 Identities=24% Similarity=0.358 Sum_probs=374.7
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.++..++|..+|++++++.+.|||.+.+|+|++|++ .|...+...++..+...+-+++..++.+++|+..+|.
T Consensus 215 a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLt-----sD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~ 289 (716)
T KOG0058|consen 215 AGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLT-----SDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWR 289 (716)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHH
Confidence 67799999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
+.++.+..+++...+.++|.+..|++.+..+++-+...+...|.+.+++|||+|+.|+...++|.+.+++-.+...+...
T Consensus 290 Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 290 LTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888888888899999999999999999999999999999999999999999999999988887766554443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------------------HH-----HcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSITFAFSLAF-------------------LI-----SVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~~~~-------------------~~-----~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
....+.....+.+......++.+ ++ ....+....+.++.+...+.+|++|+++.++
T Consensus 370 a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P 449 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKP 449 (716)
T ss_pred HhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCC
Confidence 33333322222222221111111 00 0011122234788889999999999999766
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEc----------------CCCCceeeCCCCCCHHHHHHHHhhcccCCCceE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYA----------------PNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHI 991 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~----------------~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I 991 (1156)
.-+.. ....| . ...|.|+|+||+|+|+ ||+.++|+|||||||||++++|.|||+|++|+|
T Consensus 450 ~i~~~--G~~~p-~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~I 525 (716)
T KOG0058|consen 450 RIPLT--GTLAP-D-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRI 525 (716)
T ss_pred CCCCC--Ccccc-c-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 54332 11111 1 3579999999999995 445568899999999999999999999999999
Q ss_pred EEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc--------
Q 037346 992 LIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------- 1062 (1156)
Q Consensus 992 ~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~-------- 1062 (1156)
++||+||++++.+.||++||+|.|||+||+|||+|||.++. ..+||||.+|+++|+.|+||.++|+||||.
T Consensus 526 llDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qL 605 (716)
T KOG0058|consen 526 LLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQL 605 (716)
T ss_pred EECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccc
Confidence 99999999999999999999999999999999999999875 467999999999999999999999999986
Q ss_pred ----------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecC
Q 037346 1063 ----------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1063 ----------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~ 1132 (1156)
||||+|||+|||||||||+||.++|..||++|.+..+++|||+|||||+||++||+|+|+|+|+|+|.|+
T Consensus 606 SGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~ 685 (716)
T KOG0058|consen 606 SGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGT 685 (716)
T ss_pred cchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEeccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhcCCCChHHHHHHHHhcc
Q 037346 1133 PTKLLENKSSSFAQLVAEYTSS 1154 (1156)
Q Consensus 1133 ~~eLl~~~~g~f~~l~~~~~~~ 1154 (1156)
|+||+++++|.|++|++++...
T Consensus 686 h~eLl~~~~gly~~Lv~~q~~~ 707 (716)
T KOG0058|consen 686 HDELLSKPNGLYAKLVQRQLDS 707 (716)
T ss_pred HHHHhhCcccHHHHHHHHhccc
Confidence 9999999889999999987643
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.9e-76 Score=683.25 Aligned_cols=508 Identities=25% Similarity=0.306 Sum_probs=411.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCccc---chhhHH-------HHHHHHHHHHHHHHHH
Q 037346 72 AKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNG-RQAFE---YEGYVL-------CLSERHWFFQVQQFGI 140 (1156)
Q Consensus 72 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~-~~~~~---~~g~~l-------~~~~~~~~~~~~~~~~ 140 (1156)
++.+.+..|+.+..+.++.++.++.....|+++++++|.+.. .+... ....++ +++.....+.....+.
T Consensus 138 l~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~ 217 (716)
T KOG0058|consen 138 LLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGE 217 (716)
T ss_pred HHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788899999999999999999999999999998865 22211 111111 3333333334455667
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHH-HHHHHHHHHHHHHHH
Q 037346 141 RFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALL-ILYKKLGLASIATLL 198 (1156)
Q Consensus 141 ~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~-ll~~~lg~~~l~~~~ 198 (1156)
++-..++..+|+++++.....+|++.+|+++++++.|++. ++. |++..+-++ ++.++
T Consensus 218 rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Lt-lv~~i 296 (716)
T KOG0058|consen 218 RVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLT-LVTLI 296 (716)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHH-HHHHH
Confidence 7777778888888889888999999999999999999987 111 111111111 22333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-----HHHHHHHHHHHHHHHHH-HHH
Q 037346 199 ATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKKN-----ETAWLKKSVYTEAMISF-FCW 272 (1156)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~~-----e~~~~~~~~~~~~~~~~-~~~ 272 (1156)
.+.+++.+...+++..++..++.+.+..+..+..+|.+++|||||+|+.|.++. +++...+.....++... +++
T Consensus 297 ~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~ 376 (716)
T KOG0058|consen 297 VVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFG 376 (716)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHh
Confidence 444455566677888888888888888888999999999999999999993322 22222222222222111 111
Q ss_pred -----HHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccc
Q 037346 273 -----GAPTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLE 347 (1156)
Q Consensus 273 -----~~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~ 347 (1156)
.....++++++|.+++.++.+|+|.+.+++.|-..+..++..+...++.++++..|.+|++++++.++.-+....
T Consensus 377 ~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G~ 456 (716)
T KOG0058|consen 377 STNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTGT 456 (716)
T ss_pred HHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCCc
Confidence 123456778899999999999999999999999999999999999999999999999999999998654332222
Q ss_pred cCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------
Q 037346 348 KMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------ 421 (1156)
Q Consensus 348 ~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------ 421 (1156)
..|. ...+.|+|+||+|+||.+++.++|+|+||+|+|||.||+||||||||||+.++|+++|+|++|+|.+||
T Consensus 457 ~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~ 535 (716)
T KOG0058|consen 457 LAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDI 535 (716)
T ss_pred cccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhc
Confidence 2332 456789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -------eEEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 422 -------TKAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 422 -------~~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
+||+|.|||.+|++||+|||.+|.+ .++++++++.+.+.-++++..+|+|++|.|||+|.+|||||||||||
T Consensus 536 ~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAI 615 (716)
T KOG0058|consen 536 NHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAI 615 (716)
T ss_pred CHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHH
Confidence 3799999999999999999999976 57889999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcC-c
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSG-T 571 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~ 571 (1156)
||||++||.||||||+|||||++++..+-+.+-. .+++|||+|+||+++++.||+|+++++|+++|.|+|+|+++.. +
T Consensus 616 ARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~g 695 (716)
T KOG0058|consen 616 ARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPNG 695 (716)
T ss_pred HHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCccc
Confidence 9999999999999999999999998766555433 6789999999999999999999999999999999999999876 6
Q ss_pred chHHHHHhhh
Q 037346 572 DFMELVGAHK 581 (1156)
Q Consensus 572 ~~~~~~~~~~ 581 (1156)
.|.++++.+.
T Consensus 696 ly~~Lv~~q~ 705 (716)
T KOG0058|consen 696 LYAKLVQRQL 705 (716)
T ss_pred HHHHHHHHhc
Confidence 7888887654
No 11
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.8e-69 Score=658.98 Aligned_cols=527 Identities=24% Similarity=0.305 Sum_probs=425.8
Q ss_pred HHHHHHHHHHh-----hc-----ccccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 037346 49 SPVLQNKLEAV-----VG-----VANRLTALRLAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFE 118 (1156)
Q Consensus 49 ~~~~~~~~~~~-----~~-----~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~ 118 (1156)
.++|++.|... .. ...++...+.++..++.+++.+.-.++..++..++.++.|++.+.++|.+....+..
T Consensus 112 ~~e~~~~~tg~~l~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~ 191 (709)
T COG2274 112 LEEFEKLWTGIALLLAPTASRKFKDIPPFGLSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRS 191 (709)
T ss_pred HHHHHHhhheeEEEEecccccccccccccchHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchh
Confidence 46888889721 00 011222456677778888999999999999999999999999999999887544322
Q ss_pred c-----hhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH--------
Q 037346 119 Y-----EGYVL-----CLSERHWFFQVQQFGIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER-------- 180 (1156)
Q Consensus 119 ~-----~g~~l-----~~~~~~~~~~~~~~~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~-------- 180 (1156)
. .|+++ .+....-.+....++.|+...+...+|+|++++|..+++++++|++++++. |.+.
T Consensus 192 tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~ 270 (709)
T COG2274 192 TLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGS 270 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHH
Confidence 1 22222 122222234456788999999999999999999999999999999999986 4444
Q ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 037346 181 -------------ALLILYKKLGLASIATLLATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGW 247 (1156)
Q Consensus 181 -------------~~~ll~~~lg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~ 247 (1156)
.+.++++.-+.-++++++.+++.+.+..++.+.+++..++.+....++.+.+.|.++||++||..+.
T Consensus 271 ~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~ 350 (709)
T COG2274 271 ILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAA 350 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhh
Confidence 1123333334445555555666666667777788888888889999999999999999999999998
Q ss_pred HH--HHHH----HHHHHH---HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHH
Q 037346 248 EL--KKNE----TAWLKK---SVYTEA----MISFFCWGAPTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYY 314 (1156)
Q Consensus 248 e~--r~~e----~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~ 314 (1156)
|- +.+- .+..+. ...... +..++... .-+.++|||++.+..+.+|.|.++++.++...+..|+..
T Consensus 351 e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~ 428 (709)
T COG2274 351 EPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQL--SSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITR 428 (709)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHH
Confidence 81 1111 111111 111111 11111111 224578999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcC
Q 037346 315 LPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGT 394 (1156)
Q Consensus 315 l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~ 394 (1156)
+......+.+++.+.+|+.++++.|.+.+.........+..+.|+++|++|+|+.++ .++|+|+||+|++||.+||||+
T Consensus 429 L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~ 507 (709)
T COG2274 429 LSQLWTDFQQAKVALERLGDILDTPPEQEGDKTLIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGR 507 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECC
Confidence 999999999999999999999998765332211122234567899999999998643 4799999999999999999999
Q ss_pred CCCChHHHHHHHhCCCCCCCcEEEEcC-------------eEEEEecCCcCCCccHHHHhhcCCCC-CHHHHHHHHHHhC
Q 037346 395 VGSGKSSCLSCILGGVPKESGIIRLCG-------------TKAYVAQSPWIQSGKIEENILFGKEM-DRERYERVLEACS 460 (1156)
Q Consensus 395 ~GsGKSTll~~i~g~~~~~~G~i~~~g-------------~~~~v~Q~~~~~~~ti~eni~~~~~~-~~~~~~~~~~~~~ 460 (1156)
||||||||+|+|+|+|+|++|+|.+|| +++||+|++.+|+|||+|||.++.+. +.++..++++.++
T Consensus 508 SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag 587 (709)
T COG2274 508 SGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAG 587 (709)
T ss_pred CCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhC
Confidence 999999999999999999999999999 37999999999999999999999874 5588889999999
Q ss_pred CchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccC
Q 037346 461 LKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQ 539 (1156)
Q Consensus 461 l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~ 539 (1156)
.++++..+|.|++|.|||+|.+||||||||++|||||+++|+||||||||||||+++++.+.+.+.. ..|+|+|+||||
T Consensus 588 ~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHR 667 (709)
T COG2274 588 AHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHR 667 (709)
T ss_pred cHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 9999999999999999999999999999999999999999999999999999999999999998866 568999999999
Q ss_pred CCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHHh
Q 037346 540 VEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVGA 579 (1156)
Q Consensus 540 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 579 (1156)
++.++.||+|+||++|+|+++|+|+|+++.++.|..++..
T Consensus 668 l~ti~~adrIiVl~~Gkiv~~gs~~ell~~~g~y~~l~~~ 707 (709)
T COG2274 668 LSTIRSADRIIVLDQGKIVEQGSHEELLAQGGLYARLYQQ 707 (709)
T ss_pred chHhhhccEEEEccCCceeccCCHHHHHHhcChHHHHHhc
Confidence 9999999999999999999999999999988888877643
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.7e-69 Score=668.11 Aligned_cols=507 Identities=23% Similarity=0.252 Sum_probs=385.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCccc----ch-hhHH-----HHHHHHHHHHHHH
Q 037346 69 LRLAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNG-RQAFE----YE-GYVL-----CLSERHWFFQVQQ 137 (1156)
Q Consensus 69 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~-~~~~~----~~-g~~l-----~~~~~~~~~~~~~ 137 (1156)
.+.++.+.+.+++.+++.+++.++..++.++.|++++.++|.+.. ..... .. ++++ .++.....+...+
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFK 89 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566778889999999999999999999999999999997642 11111 11 1111 2222233345567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH--------------H-------HHHHHHHHHH-HHHH
Q 037346 138 FGIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER--------------A-------LLILYKKLGL-ASIA 195 (1156)
Q Consensus 138 ~~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~--------------~-------~~ll~~~lg~-~~l~ 195 (1156)
.+.++...++..+|+|.++++...+++.++|++++++++|++. + +++++ .++| .+++
T Consensus 90 ~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~l~l~ 168 (588)
T PRK11174 90 AGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVF-PINWAAGLI 168 (588)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 8889999999999999999999999999999999999999988 0 00011 1111 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHHHHHH----HHHHHH
Q 037346 196 TLLATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKKNE-----TAWLKKS----VYTEAM 266 (1156)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~~e-----~~~~~~~----~~~~~~ 266 (1156)
.++++++.+++...+.+...+..++.++..++..+.+.|.++|+++||.|++|.+..+ .+..++. ......
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK11174 169 LLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFL 248 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222222233344556667777788888889999999999999999999999911110 0111111 011111
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHhCCCccHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 267 ISFFCWGAPT--FVSVVTFGSCILLGIPLESG---------MILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASF 335 (1156)
Q Consensus 267 ~~~~~~~~~~--~~~~~~f~~~~~~~~~lt~~---------~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~f 335 (1156)
...+...... .+.++.++.+.+. +.+|.| .+++++.+...+..|+..++..+..+.+++++++||.++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~ 327 (588)
T PRK11174 249 SSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTF 327 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 1122233333333 334444 445555666778899999999999999999999999999
Q ss_pred hccCCCCccccccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCc
Q 037346 336 LCLEGLQTDVLEKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESG 415 (1156)
Q Consensus 336 l~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G 415 (1156)
++.++.+.............+.|+++|++|.|+. ++++|+|+||+|++|+++|||||||||||||+++|+|++ |++|
T Consensus 328 l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G 404 (588)
T PRK11174 328 LETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQG 404 (588)
T ss_pred HcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCc
Confidence 9876532211110111112346999999987753 457999999999999999999999999999999999999 8999
Q ss_pred EEEEcC-------------eEEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCC
Q 037346 416 IIRLCG-------------TKAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGI 481 (1156)
Q Consensus 416 ~i~~~g-------------~~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~ 481 (1156)
+|.+|| +++||||+|++|++||+|||.+|++ .++++++++++.|++++++..+|+|++|.+||+|.
T Consensus 405 ~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~ 484 (588)
T PRK11174 405 SLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAA 484 (588)
T ss_pred EEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCC
Confidence 999999 4799999999999999999999964 88999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEc
Q 037346 482 NLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQA 560 (1156)
Q Consensus 482 ~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~ 560 (1156)
+|||||||||+||||++++|+|||||||||+||+++++++.+.+.. .+++|+|+|||+++.++.||+|++|++|+++++
T Consensus 485 ~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~ 564 (588)
T PRK11174 485 GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQ 564 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeec
Confidence 9999999999999999999999999999999999999999886655 478999999999999999999999999999999
Q ss_pred cChHHHHhcCcchHHHHHhh
Q 037346 561 GKYSDILNSGTDFMELVGAH 580 (1156)
Q Consensus 561 g~~~~l~~~~~~~~~~~~~~ 580 (1156)
|+|++++++++.|.+++..+
T Consensus 565 G~~~eL~~~~~~y~~l~~~q 584 (588)
T PRK11174 565 GDYAELSQAGGLFATLLAHR 584 (588)
T ss_pred CCHHHHHhcchHHHHHHHHh
Confidence 99999998888888887554
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5.1e-70 Score=663.67 Aligned_cols=476 Identities=24% Similarity=0.358 Sum_probs=397.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhH---H-HHHH--------------HHHHHHHHHHHHHHHH
Q 037346 666 PFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLI---I-VYVG--------------AGYKTATQLFNKMHVC 727 (1156)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~-~~~~--------------~~~~~~~~l~~~l~~~ 727 (1156)
.-+++.+++.+++.++++++.++..+............... . .++. .+.+....+-.++++|
T Consensus 157 ~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~h 236 (709)
T COG2274 157 FEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRH 236 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34556677788888888888876654321111111111100 0 0000 4557777788899999
Q ss_pred hccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 728 IFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQ 807 (1156)
Q Consensus 728 ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~ 807 (1156)
+++.|++||+++++|++++|+. |...+...+...+...+..++.+++.+++|++++|+++++.+..++++..+.
T Consensus 237 ll~Lpl~~f~~r~~Ge~~sR~~------el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~ 310 (709)
T COG2274 237 LLRLPLSYFEKRSVGEIISRVR------ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLIT 310 (709)
T ss_pred HHcCcHHHccCCChhhHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999995 7888888888888888888888899999999999999998888888877777
Q ss_pred HHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 808 QYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSIT 887 (1156)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 887 (1156)
..+.+..++..+...+..+..+++..|++.|++|||+.+.|.++..+|++.++++.+..+.......+......++..+.
T Consensus 311 ~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 390 (709)
T COG2274 311 LIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLS 390 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777888888999999999999999999999999999999999999999888877777776666655444
Q ss_pred HHHHHHHH------------------------HHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCC
Q 037346 888 FAFSLAFL------------------------ISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRP 943 (1156)
Q Consensus 888 ~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p 943 (1156)
.+.++++. ..+....++.+.+++....+.+|+.++.+.|+|.+... .+...++
T Consensus 391 ~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~---~~~~~~~ 467 (709)
T COG2274 391 SVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK---TLIHLPK 467 (709)
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc---ccccccc
Confidence 33332221 11111223334788889999999999999998864321 1234456
Q ss_pred CCCeEEEEEEEEEEcCCCC---------------ceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhh
Q 037346 944 SHGEVNIRHLQVRYAPNLP---------------LVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRT 1008 (1156)
Q Consensus 944 ~~g~I~~~~Vsf~Y~~~~~---------------~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~ 1008 (1156)
..|+|+|+||+|+|+++.| ++|+|+||||||||+|+|.|+|+|++|+|++||+|+.++++++||+
T Consensus 468 ~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~ 547 (709)
T COG2274 468 LQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRR 547 (709)
T ss_pred cCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHh
Confidence 6899999999999987655 4567999999999999999999999999999999999999999999
Q ss_pred cCeeeccccccccccchhccCCCCCC-CHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccC
Q 037346 1009 RLSIIPQDPTMFEGTTRSNLDPLEEH-ADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKK 1069 (1156)
Q Consensus 1009 ~i~~VpQdp~LF~gTIr~Nl~~~~~~-~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~ 1069 (1156)
+|++||||++||+|||||||+.+++. ++||+++||+.+|+|+||.++|.||+|. ||||++|
T Consensus 548 ~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~ 627 (709)
T COG2274 548 QVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSK 627 (709)
T ss_pred heeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccC
Confidence 99999999999999999999988764 5799999999999999999999999976 8999999
Q ss_pred CCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHH
Q 037346 1070 SKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVA 1149 (1156)
Q Consensus 1070 ~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~ 1149 (1156)
|+||||||||||||++||+.|++.|.+..++||+|+||||++|+++||||+|||+|+|+|.|+|+||++. +|.|+++++
T Consensus 628 P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~ 706 (709)
T COG2274 628 PKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQ 706 (709)
T ss_pred CCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986 899999998
Q ss_pred HH
Q 037346 1150 EY 1151 (1156)
Q Consensus 1150 ~~ 1151 (1156)
++
T Consensus 707 ~q 708 (709)
T COG2274 707 QQ 708 (709)
T ss_pred cc
Confidence 65
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7.3e-67 Score=657.31 Aligned_cols=504 Identities=22% Similarity=0.268 Sum_probs=398.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-----hhhHH-----HHHHHHHHHHHHHHH
Q 037346 70 RLAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY-----EGYVL-----CLSERHWFFQVQQFG 139 (1156)
Q Consensus 70 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~-----~g~~l-----~~~~~~~~~~~~~~~ 139 (1156)
++++..++.+++.++..+++.++..++.++.|++++.++|.+........ .++++ .++.....+...+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLE 204 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444467788889999999999999999999999999998753322111 11111 112222234456788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHH
Q 037346 140 IRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLASIATLL 198 (1156)
Q Consensus 140 ~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~l~~~~ 198 (1156)
.++...++..+|+|.++++...+++.++|+++++++ |++. .++++++.-++.+++.++
T Consensus 205 ~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~ 283 (686)
T TIGR03797 205 TRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVA 283 (686)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999889999999999987 6655 011111111222223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH---HH------HHHHHHHHHHHHHHHH
Q 037346 199 ATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKK---NE------TAWLKKSVYTEAMISF 269 (1156)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~---~e------~~~~~~~~~~~~~~~~ 269 (1156)
++++.+++...+.+...+..++.++..+++.+.+.|.++|+++||.++.|.+. -+ .+...+..........
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (686)
T TIGR03797 284 LALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTV 363 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444555666777788888888899999999999999999999988111 00 0111111111111111
Q ss_pred HHHHH--HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccc
Q 037346 270 FCWGA--PTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLE 347 (1156)
Q Consensus 270 ~~~~~--~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~ 347 (1156)
+.... ...+.+++++++.+..+.+|.|.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 364 ~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-- 441 (686)
T TIGR03797 364 FNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA-- 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC--
Confidence 11111 12233556788888889999999999999999999999999999999999999999999999875432211
Q ss_pred cCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------
Q 037346 348 KMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------ 421 (1156)
Q Consensus 348 ~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------ 421 (1156)
........+.|+++|++|+|+.. ++++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||
T Consensus 442 ~~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~ 520 (686)
T TIGR03797 442 KTDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGL 520 (686)
T ss_pred cCCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcC
Confidence 11111223569999999999743 46899999999999999999999999999999999999999999999998
Q ss_pred -------eEEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 422 -------TKAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 422 -------~~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+++||||+|++|++||+|||.++++.+++++.++++.+++++++..+|+|++|.+|++|.+||||||||++||
T Consensus 521 ~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialA 600 (686)
T TIGR03797 521 DVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIA 600 (686)
T ss_pred CHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 3799999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchH
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFM 574 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 574 (1156)
||++++|+++|||||||+||+++++++.+.+... ++|+|+|||+++.++.||+|++|++|++++.|+|+++++.++.|.
T Consensus 601 RAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~-~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~~~y~ 679 (686)
T TIGR03797 601 RALVRKPRILLFDEATSALDNRTQAIVSESLERL-KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAREGLFA 679 (686)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh-CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCCcHHH
Confidence 9999999999999999999999999998876544 689999999999999999999999999999999999998888888
Q ss_pred HHHH
Q 037346 575 ELVG 578 (1156)
Q Consensus 575 ~~~~ 578 (1156)
+++.
T Consensus 680 ~l~~ 683 (686)
T TIGR03797 680 QLAR 683 (686)
T ss_pred HHHH
Confidence 7764
No 15
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-67 Score=643.74 Aligned_cols=503 Identities=23% Similarity=0.321 Sum_probs=391.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-c-c-----cchhhHH--------HHHHHHHHHHHHHHH
Q 037346 75 LFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQ-A-F-----EYEGYVL--------CLSERHWFFQVQQFG 139 (1156)
Q Consensus 75 l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~-~-~-----~~~g~~l--------~~~~~~~~~~~~~~~ 139 (1156)
+.+..|+.++++.+..++..+...+..+++.+++..+...+ + . .|..+++ +...++|+| ...|
T Consensus 658 ~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f--~~~g 735 (1228)
T KOG0055|consen 658 LNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFF--GIAG 735 (1228)
T ss_pred hccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Confidence 44556777788888888887777777788888887665322 1 1 1111111 112223333 3445
Q ss_pred HHHHHHHHHHHHHHHhcCCccccC--CCCHHHHHHHHHHHHHH--------------HH------HHHHHHHHH-HHHHH
Q 037346 140 IRFRATLFAMIYNKGLTLSGQAKQ--GNTSGEIINLIAVDAER--------------AL------LILYKKLGL-ASIAT 196 (1156)
Q Consensus 140 ~~~r~~l~~~i~~k~l~l~~~~~~--~~~~g~i~nl~s~D~~~--------------~~------~ll~~~lg~-~~l~~ 196 (1156)
.++-..++...|+++++....++| +++ |.+.+++.+|+.. ++ ..+....|| .++++
T Consensus 736 e~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~ 814 (1228)
T KOG0055|consen 736 EKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVV 814 (1228)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555666667777776665554 345 9999999999876 00 001111122 12233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHHH
Q 037346 197 LLATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE-----LKKNETAWLKKSVYTEAMISFFC 271 (1156)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e-----~r~~e~~~~~~~~~~~~~~~~~~ 271 (1156)
+++.+++....+...+.+.....+..+..++..++..|++.+||||+.|+.| .-.++++..++.....++...+.
T Consensus 815 la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~ 894 (1228)
T KOG0055|consen 815 LATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLG 894 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555556677788888888888999999999999999999999999 22233333333333333222221
Q ss_pred HH------HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CCcc
Q 037346 272 WG------APTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEG-LQTD 344 (1156)
Q Consensus 272 ~~------~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~-~~~~ 344 (1156)
++ ....+..++||.+++..+..++..+|.++..+.+-...+.+.....+.+.+|+.|+.+|++++++++ .+.+
T Consensus 895 f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~ 974 (1228)
T KOG0055|consen 895 FGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPD 974 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 11 1223446778888888899999999999998888888888999999999999999999999999875 3332
Q ss_pred ccccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--
Q 037346 345 VLEKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-- 422 (1156)
Q Consensus 345 ~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-- 422 (1156)
.......++..+.|+++||+|+||++++.++|+|+||++++|+.+||||||||||||.+.+|.++|+|++|.|.+||+
T Consensus 975 ~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~di 1054 (1228)
T KOG0055|consen 975 STSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDI 1054 (1228)
T ss_pred CCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCccc
Confidence 211111223457899999999999999999999999999999999999999999999999999999999999999993
Q ss_pred -----------EEEEecCCcCCCccHHHHhhcC-CCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 -----------KAYVAQSPWIQSGKIEENILFG-KEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 -----------~~~v~Q~~~~~~~ti~eni~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
+|.|+|+|.||++||||||++| ...+++++.++++.+..++++..+|+|+||.|||+|.+||||||||
T Consensus 1055 k~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQR 1134 (1228)
T KOG0055|consen 1055 KDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQR 1134 (1228)
T ss_pred ccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHH
Confidence 6999999999999999999999 3468899999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
||||||+++||+||||||+|||||.++++-+-+.+-+ ..|+|+|+|+||++++++||.|+|++||+|+|+|+|++|++.
T Consensus 1135 IAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~~ 1214 (1228)
T KOG0055|consen 1135 IAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLAK 1214 (1228)
T ss_pred HHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEecccHHHHHhC
Confidence 9999999999999999999999999998766544433 679999999999999999999999999999999999999999
Q ss_pred CcchHHHHHhh
Q 037346 570 GTDFMELVGAH 580 (1156)
Q Consensus 570 ~~~~~~~~~~~ 580 (1156)
.+.|.++++.+
T Consensus 1215 ~G~Y~~Lv~~q 1225 (1228)
T KOG0055|consen 1215 RGIYFRLVQLQ 1225 (1228)
T ss_pred CCchHHHhhhc
Confidence 99999988654
No 16
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.4e-67 Score=657.51 Aligned_cols=501 Identities=23% Similarity=0.268 Sum_probs=388.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc---c-h-hhHH-----HHHHHHHHHHHHHHHHHHH
Q 037346 74 VLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFE---Y-E-GYVL-----CLSERHWFFQVQQFGIRFR 143 (1156)
Q Consensus 74 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~---~-~-g~~l-----~~~~~~~~~~~~~~~~~~r 143 (1156)
.+++.+++.++..+++.++..++.++.|+++++++|.+....+.. . . .+++ .++.....+...+.+.++.
T Consensus 154 ~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 233 (711)
T TIGR00958 154 GLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARIN 233 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777888889999999999999999999999886432211 1 1 1111 1111111223355667777
Q ss_pred HHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHH
Q 037346 144 ATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLASIATLLATAI 202 (1156)
Q Consensus 144 ~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~l~~~~~~~~ 202 (1156)
..++..+|++.++.+...+++.++|+++|++++|++. ++++++..-+..+++.++.+++
T Consensus 234 ~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l 313 (711)
T TIGR00958 234 LRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPL 313 (711)
T ss_pred HHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 8888999999999999888999999999999999987 0001111101111111222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHHHH----HHHHHHHHHHHHHH-
Q 037346 203 VMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKKNE-----TAWLK----KSVYTEAMISFFCW- 272 (1156)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~~e-----~~~~~----~~~~~~~~~~~~~~- 272 (1156)
.+.+...+.+...+..++.++..++..+.+.|.++|+++||.|++|.+..+ .+... +.....+.......
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (711)
T TIGR00958 314 VFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSV 393 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444556666677777778888888999999999999999999921110 01111 11111111111111
Q ss_pred -HHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCC
Q 037346 273 -GAPTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPR 351 (1156)
Q Consensus 273 -~~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~ 351 (1156)
.....+..+.++.+.+..+.+|+|.+++++.++..+..|+..++..+..+.+++++.+||.++++.++..+......+
T Consensus 394 ~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~- 472 (711)
T TIGR00958 394 LGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTLAP- 472 (711)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCC-
Confidence 111223455677888888999999999999999999999999999999999999999999999987644322111111
Q ss_pred CCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC----------
Q 037346 352 GNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG---------- 421 (1156)
Q Consensus 352 ~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g---------- 421 (1156)
.+..+.|+++|++|+|+.++++++|+|+||+|++||.++||||||||||||+++|+|+++|++|+|.+||
T Consensus 473 ~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~ 552 (711)
T TIGR00958 473 LNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHY 552 (711)
T ss_pred CCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHH
Confidence 1234569999999999865456899999999999999999999999999999999999999999999998
Q ss_pred ---eEEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 422 ---TKAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 422 ---~~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
+++||||+|++|++||+|||.+|.+ .+++++.++++.++++++++.+|+|++|.+|++|.+||||||||++||||+
T Consensus 553 lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARAL 632 (711)
T TIGR00958 553 LHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARAL 632 (711)
T ss_pred HHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHH
Confidence 4799999999999999999999964 678899999999999999999999999999999999999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHH
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMEL 576 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 576 (1156)
+++|+|+|||||||+||+++++.+.+ ....+++|+|+||||++.+..||+|++|++|+|++.|+|+|++++++.|.++
T Consensus 633 l~~p~ILILDEpTSaLD~~te~~i~~-~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 633 VRKPRVLILDEATSALDAECEQLLQE-SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQGCYKHL 710 (711)
T ss_pred hcCCCEEEEEccccccCHHHHHHHHH-hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchHhc
Confidence 99999999999999999999999887 3335789999999999999999999999999999999999999877666553
No 17
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.4e-66 Score=653.34 Aligned_cols=506 Identities=20% Similarity=0.239 Sum_probs=398.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-----hhhHH-----HHHHHHHHHHHHHHH
Q 037346 70 RLAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY-----EGYVL-----CLSERHWFFQVQQFG 139 (1156)
Q Consensus 70 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~-----~g~~l-----~~~~~~~~~~~~~~~ 139 (1156)
+.++..++.+++.++..++..++..++.++.|++++.++|.+........ .++++ .+......+...+++
T Consensus 143 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (710)
T TIGR03796 143 RALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQ 222 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455567777788888899999999999999999999997754322111 11111 112222234457788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHH
Q 037346 140 IRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER--------------------ALLILYKKLGLASIATLLA 199 (1156)
Q Consensus 140 ~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~--------------------~~~ll~~~lg~~~l~~~~~ 199 (1156)
.++...++..+|+|.++++...+++.++|+++++++.|..- .++++++.-++.+++.++.
T Consensus 223 ~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 302 (710)
T TIGR03796 223 IKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLNDQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAF 302 (710)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999988999999999999887432 0111122112222333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH---------HHHHHHHHHHHHHHHHHHHH
Q 037346 200 TAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK---------KNETAWLKKSVYTEAMISFF 270 (1156)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r---------~~e~~~~~~~~~~~~~~~~~ 270 (1156)
+++.+.+...+.+...+..++.++..+++.+.+.|.++|+++||.+++|.+ .++.+...+..........+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (710)
T TIGR03796 303 AAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVL 382 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455566667777778888888899999999999999999999811 11111111111111111111
Q ss_pred HHH--HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccc--
Q 037346 271 CWG--APTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVL-- 346 (1156)
Q Consensus 271 ~~~--~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~-- 346 (1156)
... ....+.+++++++.+..+.+|.|.++++..++..+..|+..++..+..+.+++++++|+.++++.++......
T Consensus 383 ~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~ 462 (710)
T TIGR03796 383 PTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEE 462 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc
Confidence 111 1122345678888888999999999999999999999999999999999999999999999998764332111
Q ss_pred --c--cCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-
Q 037346 347 --E--KMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG- 421 (1156)
Q Consensus 347 --~--~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g- 421 (1156)
. ..+.....+.|+++|++|+|+.. ++++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||
T Consensus 463 ~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~ 541 (710)
T TIGR03796 463 APAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGI 541 (710)
T ss_pred ccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCE
Confidence 0 01101224579999999999843 46799999999999999999999999999999999999999999999998
Q ss_pred ------------eEEEEecCCcCCCccHHHHhhcCC-CCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 ------------TKAYVAQSPWIQSGKIEENILFGK-EMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 ------------~~~~v~Q~~~~~~~ti~eni~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
+++||||+|++|++||+|||.++. +.+++++.++++.+++++++..+|+|++|.+|++|.+||||||
T Consensus 542 ~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQr 621 (710)
T TIGR03796 542 PREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQR 621 (710)
T ss_pred eHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHH
Confidence 379999999999999999999886 4788999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHh
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||+||||++++|+|+|||||||+||+++++++++.+.. .++|+|+||||++.++.||+|++|++|++++.|+|+++++
T Consensus 622 QRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~-~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 622 QRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR-RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWA 700 (710)
T ss_pred HHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHH
Confidence 999999999999999999999999999999999887754 6899999999999999999999999999999999999998
Q ss_pred cCcchHHHH
Q 037346 569 SGTDFMELV 577 (1156)
Q Consensus 569 ~~~~~~~~~ 577 (1156)
.++.|.+++
T Consensus 701 ~~~~y~~l~ 709 (710)
T TIGR03796 701 VGGAYARLI 709 (710)
T ss_pred cCCcHHHHh
Confidence 877777654
No 18
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=8.5e-66 Score=649.92 Aligned_cols=504 Identities=22% Similarity=0.313 Sum_probs=395.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-----hhhHH-----HHHHHHHHHHHHHHHH
Q 037346 71 LAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY-----EGYVL-----CLSERHWFFQVQQFGI 140 (1156)
Q Consensus 71 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~-----~g~~l-----~~~~~~~~~~~~~~~~ 140 (1156)
.+...++.+++.++..+++.++..++.++.|++++.++|.+........ .++++ .++.....+...+.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (708)
T TIGR01193 146 KFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQ 225 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667778888888888999999999999999999997654322111 11111 1111222234567788
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHH
Q 037346 141 RFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLASIATLLA 199 (1156)
Q Consensus 141 ~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~l~~~~~ 199 (1156)
++...++..+|+|.++++...+++.++|+++++++ |++. .+.++++.-+..+++.+++
T Consensus 226 ~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 304 (708)
T TIGR01193 226 RLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLLS 304 (708)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88899999999999999999999999999999998 7765 0011111111122222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH---H---HHHH---HHHHHHHHHHHH
Q 037346 200 TAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKKNE---T---AWLK---KSVYTEAMISFF 270 (1156)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~~e---~---~~~~---~~~~~~~~~~~~ 270 (1156)
+++.+++...+.+...+..++.++..+++.+.+.|.++|+++||.+++|.+..+ . +..+ +..........+
T Consensus 305 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (708)
T TIGR01193 305 IPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAI 384 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344445566777777888888888899999999999999999999822111 0 0011 111111111111
Q ss_pred HHH--HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc
Q 037346 271 CWG--APTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEK 348 (1156)
Q Consensus 271 ~~~--~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~ 348 (1156)
... ....+.++++|++.+..+.+|+|.++++..++..+..|+..+...+..+.+++++.+|+.++++.++..+.....
T Consensus 385 ~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~ 464 (708)
T TIGR01193 385 KAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKKR 464 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc
Confidence 111 112334667888988999999999999999999999999999999999999999999999999876432211110
Q ss_pred CCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------
Q 037346 349 MPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------- 421 (1156)
Q Consensus 349 ~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------- 421 (1156)
.+.....+.|+++|++|+|+. ++++|+|+||+|++|+.++|+||||||||||+++|+|+++|++|+|.+||
T Consensus 465 ~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~ 542 (708)
T TIGR01193 465 TELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDID 542 (708)
T ss_pred cCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcC
Confidence 111223457999999999973 45799999999999999999999999999999999999999999999998
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCC--CCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGK--EMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
+++||||+|++|++||+|||.++. ..+++++.++++.+++++++..+|.|++|.+|++|.+||||||||++|
T Consensus 543 ~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRial 622 (708)
T TIGR01193 543 RHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIAL 622 (708)
T ss_pred HHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHH
Confidence 379999999999999999999983 477889999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcch
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDF 573 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 573 (1156)
|||++++|+++|||||||+||+++++++.+.+...+++|+|+||||++.+..||+|++|++|++++.|+|+++++.++.|
T Consensus 623 ARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~~~~y 702 (708)
T TIGR01193 623 ARALLTDSKVLILDESTSNLDTITEKKIVNNLLNLQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDRNGFY 702 (708)
T ss_pred HHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhcCCcH
Confidence 99999999999999999999999999998877656689999999999999999999999999999999999999887777
Q ss_pred HHHH
Q 037346 574 MELV 577 (1156)
Q Consensus 574 ~~~~ 577 (1156)
.+++
T Consensus 703 ~~l~ 706 (708)
T TIGR01193 703 ASLI 706 (708)
T ss_pred HHHh
Confidence 7765
No 19
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.1e-65 Score=647.42 Aligned_cols=498 Identities=25% Similarity=0.321 Sum_probs=395.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-----hhhHH-----HHHHHHHHHHHHHH
Q 037346 69 LRLAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY-----EGYVL-----CLSERHWFFQVQQF 138 (1156)
Q Consensus 69 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~-----~g~~l-----~~~~~~~~~~~~~~ 138 (1156)
.+.++..++.+++.+...+++.++..++.++.|++++.++|.+........ .++++ .+......+...+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (694)
T TIGR03375 135 KHWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVA 214 (694)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666778888889999999999999999999999999997753322111 11111 11222223345678
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHH
Q 037346 139 GIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLASIATL 197 (1156)
Q Consensus 139 ~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~l~~~ 197 (1156)
+.++...++..+|+|.++++... .+.++|++++++ +|++. .+.++++.-++.+++.+
T Consensus 215 ~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 292 (694)
T TIGR03375 215 GKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPL 292 (694)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 88999999999999999999876 688999999998 68876 01112222222333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH---------HHHHHHHHHHHHHHHHH
Q 037346 198 LATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKK---------NETAWLKKSVYTEAMIS 268 (1156)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~---------~e~~~~~~~~~~~~~~~ 268 (1156)
+++++.+++...+.+...+..++.++..+++.+.+.|.++|+++||.+++|.+. +..+...+.........
T Consensus 293 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (694)
T TIGR03375 293 VAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLAT 372 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555566677778888888899999999999999999999999988111 11111111111111111
Q ss_pred HHHHHH--HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 037346 269 FFCWGA--PTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVL 346 (1156)
Q Consensus 269 ~~~~~~--~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~ 346 (1156)
.+.... ...+.++++|++.+..+.+|+|.+++++.++..+..|+..++..+..+.+++++++|+.++++.++..+...
T Consensus 373 ~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 452 (694)
T TIGR03375 373 NFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGT 452 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 111111 122335678888888899999999999999999999999999999999999999999999998765322111
Q ss_pred ccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----
Q 037346 347 EKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG----- 421 (1156)
Q Consensus 347 ~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g----- 421 (1156)
...+.....+.|+++|++|+|+.. ++++|+|+||+|++||.++|+|+||||||||+++|+|+|+|++|+|.+||
T Consensus 453 ~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~ 531 (694)
T TIGR03375 453 RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQ 531 (694)
T ss_pred CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhh
Confidence 111111223569999999999742 45799999999999999999999999999999999999999999999998
Q ss_pred --------eEEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 422 --------TKAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 422 --------~~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
+++||||+|++|++||+|||.++.+ .+++++.++++.+++.++++.+|+|++|.+|++|.+||||||||++
T Consensus 532 ~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRla 611 (694)
T TIGR03375 532 IDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVA 611 (694)
T ss_pred CCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHH
Confidence 4799999999999999999999976 7899999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
||||++++|+++|||||||+||+++++++.+.+.. .+++|+|+||||++.++.||+|++|++|++++.|+|+++++.
T Consensus 612 lARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 612 LARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999887755 468999999999999999999999999999999999998753
No 20
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-64 Score=627.74 Aligned_cols=505 Identities=19% Similarity=0.238 Sum_probs=391.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc---hh--hHH-----HHHHHHHHHHHHHHHHH
Q 037346 72 AKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY---EG--YVL-----CLSERHWFFQVQQFGIR 141 (1156)
Q Consensus 72 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~---~g--~~l-----~~~~~~~~~~~~~~~~~ 141 (1156)
+..+++.+++.++..+++.++..++..+.|++++.+++.+........ .. +++ .++.....+...+++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 95 (582)
T PRK11176 16 LWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGK 95 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566677777777788888888888899999999987654322111 11 111 11111122334667788
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHH
Q 037346 142 FRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLASIATLLAT 200 (1156)
Q Consensus 142 ~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~l~~~~~~ 200 (1156)
+...++..+|+|.++++...+++.++|++++++++|++. .+.++++.-++.+++.++++
T Consensus 96 ~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~ 175 (582)
T PRK11176 96 VVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIA 175 (582)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999987 01111111112222222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---HHHHH--HHHHH----HHHHHHHHHHHHH
Q 037346 201 AIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE---LKKNE--TAWLK----KSVYTEAMISFFC 271 (1156)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e---~r~~e--~~~~~----~~~~~~~~~~~~~ 271 (1156)
++..++.....+...+..++.++..++..+...|.++|+++||.+++| .++-+ .+... +..........+.
T Consensus 176 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (582)
T PRK11176 176 PIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPII 255 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334445566667777778888888889999999999999999998 11111 01111 1111111111111
Q ss_pred HH--HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccC
Q 037346 272 WG--APTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKM 349 (1156)
Q Consensus 272 ~~--~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~ 349 (1156)
.. ....+.+++++.+.+..+.+++|.+.+++.++..+..|+..+...+..+.+++.+++|+.++++.++..+... .
T Consensus 256 ~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~--~ 333 (582)
T PRK11176 256 QLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGK--R 333 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCC--c
Confidence 11 1122334566777777889999999999999999999999999999999999999999999998664322111 1
Q ss_pred CCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------
Q 037346 350 PRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------- 422 (1156)
Q Consensus 350 ~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------- 422 (1156)
......+.|+++|++|+|+.. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.
T Consensus 334 ~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~ 412 (582)
T PRK11176 334 VIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTL 412 (582)
T ss_pred CCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCH
Confidence 111223469999999999742 468999999999999999999999999999999999999999999999983
Q ss_pred ------EEEEecCCcCCCccHHHHhhcCCC--CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 423 ------KAYVAQSPWIQSGKIEENILFGKE--MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 423 ------~~~v~Q~~~~~~~ti~eni~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
++||||+|.+|++||+|||.+|.+ .++++++++++.++++++++.+|+|++|.+|++|.+||||||||++||
T Consensus 413 ~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LA 492 (582)
T PRK11176 413 ASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIA 492 (582)
T ss_pred HHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHH
Confidence 699999999999999999999853 688999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcch
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDF 573 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 573 (1156)
||++++|+|+|||||||+||+++++.+++.+.. .+++|+|+||||++.++.||+|++|++|++++.|+|+++++.++.|
T Consensus 493 Rall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~~y 572 (582)
T PRK11176 493 RALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQNGVY 572 (582)
T ss_pred HHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCCChH
Confidence 999999999999999999999999999887765 3689999999999999999999999999999999999999888888
Q ss_pred HHHHHh
Q 037346 574 MELVGA 579 (1156)
Q Consensus 574 ~~~~~~ 579 (1156)
++++..
T Consensus 573 ~~l~~~ 578 (582)
T PRK11176 573 AQLHKM 578 (582)
T ss_pred HHHHHH
Confidence 888754
No 21
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.8e-65 Score=631.54 Aligned_cols=431 Identities=26% Similarity=0.401 Sum_probs=350.2
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+...++|.++++++++.|++||+++++|++++|++ .|...++..+......+...++.+++.+++++..+|.
T Consensus 79 ~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~l~~~~t-----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (567)
T COG1132 79 LGQKIVADLRRDLFEKLLRLPLSFFDKAKSGDLISRLT-----NDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWR 153 (567)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHhCcCCcchHHHHHH-----hhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 44788999999999999999999999999999999999 6666666655555444555677888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++...+++.+...++.++.+...+......+.+.+.+.|+++|+++||+|+.++...+++.+..+...+.......
T Consensus 154 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (567)
T COG1132 154 LALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASR 233 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98877766666666666666556777777888889999999999999999999999998888887777766665444333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---H---------------------HHcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSITFAFSLAF---L---------------------ISVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~~~~---~---------------------~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
....+.....++..+.......+ . ..+..........++....+.+|+.++.+.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 313 (567)
T COG1132 234 LEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEP 313 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 33333222222221111111110 0 00011111122566778899999999998755
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcC--------------CCCceeeCCCCCCHHHHHHHHhhcccCCCceEEE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAP--------------NLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILI 993 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~--------------~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~i 993 (1156)
+.... . ...++..|+|+|+||+|+|++ ++.++++||||||||||+++|+|+|+|++|+|+|
T Consensus 314 ~~~~~---~--~~~~~~~~~I~f~~vsf~y~~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~i 388 (567)
T COG1132 314 EVEDP---P--DPLKDTIGSIEFENVSFSYPGKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILI 388 (567)
T ss_pred cccCC---C--CCCCCCCCeEEEEEEEEEcCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEE
Confidence 42211 1 112345688999999999974 3345688999999999999999999999999999
Q ss_pred cCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc----------
Q 037346 994 DGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ---------- 1062 (1156)
Q Consensus 994 dG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~---------- 1062 (1156)
||+||++++.++||++|++|||||+||+|||+|||+++++ ++|||+++|++.++++|+|+++|+||||.
T Consensus 389 dg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSg 468 (567)
T COG1132 389 DGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSG 468 (567)
T ss_pred CCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCH
Confidence 9999999999999999999999999999999999999976 68999999999999999999999999976
Q ss_pred --------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChh
Q 037346 1063 --------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPT 1134 (1156)
Q Consensus 1063 --------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~ 1134 (1156)
|||++|+|+|||||||||+||++||+.|++++++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~ 548 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHE 548 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHH
Confidence 899999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred HHhcCCCChHHHHHHHHhc
Q 037346 1135 KLLENKSSSFAQLVAEYTS 1153 (1156)
Q Consensus 1135 eLl~~~~g~f~~l~~~~~~ 1153 (1156)
||+++ +|.|++||+.++.
T Consensus 549 eLl~~-~g~y~~l~~~~~~ 566 (567)
T COG1132 549 ELLAK-GGLYARLYQAQGG 566 (567)
T ss_pred HHHHc-CCHHHHHHHHhhc
Confidence 99986 8999999998764
No 22
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.5e-63 Score=618.13 Aligned_cols=503 Identities=20% Similarity=0.241 Sum_probs=385.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc---hhhHH---------HHHHHHHHHHHHHHH
Q 037346 72 AKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY---EGYVL---------CLSERHWFFQVQQFG 139 (1156)
Q Consensus 72 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~---~g~~l---------~~~~~~~~~~~~~~~ 139 (1156)
++.+++.+++.++..+++.++..++..+.|+++..++|.+........ .++++ .+......+...+.+
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (592)
T PRK10790 14 LLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAA 93 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334566677788888888999999999999999999997643222111 11111 111122233446677
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHH
Q 037346 140 IRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLASIATLL 198 (1156)
Q Consensus 140 ~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~l~~~~ 198 (1156)
.++...++..+|+|.++.+...+++.++|++++++++|++. .+.++++.-.+.+++.++
T Consensus 94 ~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~ 173 (592)
T PRK10790 94 VGVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIM 173 (592)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999999999999888999999999999999987 000011100111111112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH------HHHHHHHHHH---HHHHHH---
Q 037346 199 ATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK------KNETAWLKKS---VYTEAM--- 266 (1156)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r------~~e~~~~~~~---~~~~~~--- 266 (1156)
++++.+++.....+...+..++..+..++..+...|.++|+++||.|+.|.+ +...+..+.. ....+.
T Consensus 174 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (592)
T PRK10790 174 IFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLR 253 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222333344555566666667777778889999999999999999811 1101111110 011111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 037346 267 -ISFFCWGAPTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDV 345 (1156)
Q Consensus 267 -~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~ 345 (1156)
...+......++..+ ++.+ +..+.++.|.+++++.++..+..|+..++..+..+.++..+++||.++++.++.+...
T Consensus 254 ~~~~~~~~~~~~~~~~-~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~ 331 (592)
T PRK10790 254 PLLSLFSALILCGLLM-LFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN 331 (592)
T ss_pred HHHHHHHHHHHHHHHH-HHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC
Confidence 010111111111112 2223 3577899999999999999999999999999999999999999999999865432211
Q ss_pred cccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---
Q 037346 346 LEKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--- 422 (1156)
Q Consensus 346 ~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--- 422 (1156)
... ....+.|+++|++|+|+. ++++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.
T Consensus 332 -~~~--~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~ 406 (592)
T PRK10790 332 -DDR--PLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLS 406 (592)
T ss_pred -Ccc--CCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhh
Confidence 111 112346999999999973 357999999999999999999999999999999999999999999999983
Q ss_pred ----------EEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 423 ----------KAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 423 ----------~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
++||||+|++|++||+|||.++.+.++++..++++.++++++++.+|+|++|.+|++|.+||||||||++
T Consensus 407 ~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRia 486 (592)
T PRK10790 407 SLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLA 486 (592)
T ss_pred hCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHH
Confidence 7999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCc
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGT 571 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 571 (1156)
|||||+++|+|+|||||||+||+++++.+.+.+.. .+++|+|+||||++.++.||+|++|++|++++.|+|+++++.++
T Consensus 487 lARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~~ 566 (592)
T PRK10790 487 LARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQG 566 (592)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999887755 46799999999999999999999999999999999999998888
Q ss_pred chHHHHHhhh
Q 037346 572 DFMELVGAHK 581 (1156)
Q Consensus 572 ~~~~~~~~~~ 581 (1156)
.|.+++..+.
T Consensus 567 ~y~~l~~~~~ 576 (592)
T PRK10790 567 RYWQMYQLQL 576 (592)
T ss_pred HHHHHHHHHh
Confidence 8998886543
No 23
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.8e-63 Score=616.35 Aligned_cols=504 Identities=20% Similarity=0.241 Sum_probs=395.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc----h-hhHH-----HHHHHHHHHHHHHHHHH
Q 037346 72 AKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY----E-GYVL-----CLSERHWFFQVQQFGIR 141 (1156)
Q Consensus 72 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~----~-g~~l-----~~~~~~~~~~~~~~~~~ 141 (1156)
+..+++.+++.+++++++.++..++....|++++.+++.......... . ++++ .+......+...+.+.+
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 84 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNK 84 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334667778888899999999999999999999999986543221111 1 1111 11112222345677788
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHH
Q 037346 142 FRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLASIATLLAT 200 (1156)
Q Consensus 142 ~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~l~~~~~~ 200 (1156)
+...++..+|+|.++.+...+++.++|++++++++|++. .++++++.-+..+++.++++
T Consensus 85 ~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~ 164 (571)
T TIGR02203 85 VVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVML 164 (571)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 888899999999999999888899999999999999987 01111111111222222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH---HHH--HHHHH----HHHHHHHHHHHHH
Q 037346 201 AIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK---KNE--TAWLK----KSVYTEAMISFFC 271 (1156)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r---~~e--~~~~~----~~~~~~~~~~~~~ 271 (1156)
++.+.+...+.+......++..+..+++.+.+.|.++|+++||.++.|.+ +-+ .+..+ +.....+....+.
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (571)
T TIGR02203 165 PVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPIT 244 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455666777788888888999999999999999999999998811 100 01111 1111111111111
Q ss_pred HHH--HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccC
Q 037346 272 WGA--PTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKM 349 (1156)
Q Consensus 272 ~~~--~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~ 349 (1156)
... ...+..++++.+.+..+.+|+|.+++++.++..+..|+..+...+..+.+++++++|+.++++.++..+... .
T Consensus 245 ~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~--~ 322 (571)
T TIGR02203 245 QLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT--R 322 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC--C
Confidence 111 122345567777788899999999999999999999999999999999999999999999998754422111 1
Q ss_pred CCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------
Q 037346 350 PRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------- 421 (1156)
Q Consensus 350 ~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------- 421 (1156)
+.....+.|+++|++|+|+.. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 323 ~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~ 401 (571)
T TIGR02203 323 AIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTL 401 (571)
T ss_pred CCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCH
Confidence 111223469999999999743 46799999999999999999999999999999999999999999999998
Q ss_pred -----eEEEEecCCcCCCccHHHHhhcCC--CCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 422 -----TKAYVAQSPWIQSGKIEENILFGK--EMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~ti~eni~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+++||||+|++|++|++|||.++. +.++++++++++.|++++++..+|+|++|.+|++|.+||||||||++||
T Consensus 402 ~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLA 481 (571)
T TIGR02203 402 ASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIA 481 (571)
T ss_pred HHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHH
Confidence 379999999999999999999995 4889999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcch
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDF 573 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 573 (1156)
||++++|+|+|||||||+||+++++++.+.+.. .+++|+|+|||+++.+..||+|++|++|++++.|+++++++.++.|
T Consensus 482 Rall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~~~ 561 (571)
T TIGR02203 482 RALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNGLY 561 (571)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCCHH
Confidence 999999999999999999999999999887755 4689999999999999999999999999999999999999877667
Q ss_pred HHHHH
Q 037346 574 MELVG 578 (1156)
Q Consensus 574 ~~~~~ 578 (1156)
.++..
T Consensus 562 ~~~~~ 566 (571)
T TIGR02203 562 AQLHN 566 (571)
T ss_pred HHHHH
Confidence 76554
No 24
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3e-63 Score=614.32 Aligned_cols=505 Identities=20% Similarity=0.249 Sum_probs=391.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-hhhHH--HHH----HHHHHHHHHHHHHHHHHHH
Q 037346 74 VLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY-EGYVL--CLS----ERHWFFQVQQFGIRFRATL 146 (1156)
Q Consensus 74 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~-~g~~l--~~~----~~~~~~~~~~~~~~~r~~l 146 (1156)
.+++.+++.+++.+++.++..++.++.|++++.++|.+........ ...++ .+. .....+...+...+++..+
T Consensus 12 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (588)
T PRK13657 12 QYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAV 91 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677778888889999999999999999999998764321110 11111 111 1111223456677888888
Q ss_pred HHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHHH------------------HHHHH--HHHH-HHHHHHHHHHHHHHH
Q 037346 147 FAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAERA------------------LLILY--KKLG-LASIATLLATAIVML 205 (1156)
Q Consensus 147 ~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~~------------------~~ll~--~~lg-~~~l~~~~~~~~~~~ 205 (1156)
...+|+|.++++...+++.++|++++++++|++.. ++++. ..+. +.+++.++++++...
T Consensus 92 ~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~ 171 (588)
T PRK13657 92 LTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTL 171 (588)
T ss_pred HHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999998899999999999999998860 00000 0111 111222222223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH------HHHHHHHH---HHHHHHHHHHHH--HHH
Q 037346 206 ANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKK------NETAWLKK---SVYTEAMISFFC--WGA 274 (1156)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~------~e~~~~~~---~~~~~~~~~~~~--~~~ 274 (1156)
+...+.+......++.++..++..+...|.++|+++||.|+.|.+. ...+..+. ..........+. ...
T Consensus 172 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (588)
T PRK13657 172 ITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAAST 251 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445566667777778888888999999999999999999988111 11011111 001111111111 111
Q ss_pred HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCC
Q 037346 275 PTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNS 354 (1156)
Q Consensus 275 ~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~ 354 (1156)
...+.+++++++.+..+.+|+|.+++++.++..+..|+..+...+..+..++.+++|+.++++.++..+......+....
T Consensus 252 ~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 331 (588)
T PRK13657 252 ITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDLGRV 331 (588)
T ss_pred HHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCcCCC
Confidence 22344567788888889999999999999999999999999999999999999999999999865432111111111112
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------- 421 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------- 421 (1156)
.+.|+++|++|+|+. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.+||
T Consensus 332 ~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~ 409 (588)
T PRK13657 332 KGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRR 409 (588)
T ss_pred CCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHh
Confidence 346999999999973 35699999999999999999999999999999999999999999999998
Q ss_pred eEEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 422 TKAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 422 ~~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
.++||||+|++|++||+|||.++.+ .++++..++++.+++.+++..+|+|++|.+|++|.+||||||||++||||++++
T Consensus 410 ~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~ 489 (588)
T PRK13657 410 NIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKD 489 (588)
T ss_pred heEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999964 678889999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHHh
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVGA 579 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 579 (1156)
|+|+|||||||+||+++++.+++.+.. .+++|+|+||||++.++.||+|++|++|++++.|+++++++..+.|.+++..
T Consensus 490 ~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~y~~l~~~ 569 (588)
T PRK13657 490 PPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGGRFAALLRA 569 (588)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCChHHHHHHH
Confidence 999999999999999999999887755 3689999999999999999999999999999999999999888888888764
Q ss_pred h
Q 037346 580 H 580 (1156)
Q Consensus 580 ~ 580 (1156)
+
T Consensus 570 ~ 570 (588)
T PRK13657 570 Q 570 (588)
T ss_pred h
Confidence 4
No 25
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4e-63 Score=609.19 Aligned_cols=501 Identities=22% Similarity=0.274 Sum_probs=379.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCc----ccch--h--hHH-----HHHHHHHHHHHHHHH
Q 037346 74 VLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLN-GRQA----FEYE--G--YVL-----CLSERHWFFQVQQFG 139 (1156)
Q Consensus 74 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~-~~~~----~~~~--g--~~l-----~~~~~~~~~~~~~~~ 139 (1156)
.+.+.+++.+++++++.++..++.++.|++++.+++... .+.. .... . +.+ .++.....+...+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (574)
T PRK11160 9 KLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDAT 88 (574)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777888888999999999999999999999999642 2210 1110 1 111 112222234456778
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HH-HHHHHHHHHHHHHHH
Q 037346 140 IRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------AL-LILYKKLGLASIATL 197 (1156)
Q Consensus 140 ~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~-~ll~~~lg~~~l~~~ 197 (1156)
.++...++..+|+|.++++...+++.++|++++++++|++. ++ ++++....++.++.+
T Consensus 89 ~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~ 168 (574)
T PRK11160 89 FRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGG 168 (574)
T ss_pred HHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999988 00 011111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH------HHHHHHHHH---HHHHHHHHH
Q 037346 198 LATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK------KNETAWLKK---SVYTEAMIS 268 (1156)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r------~~e~~~~~~---~~~~~~~~~ 268 (1156)
++.++.+.+...+.+...+..++..+..++..+.+.|.++|+++||.|+.|.+ +...+..+. .....+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (574)
T PRK11160 169 ILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQ 248 (574)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111223345555666777788888888999999999999999999811 111111111 111111111
Q ss_pred HHHHH--HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 037346 269 FFCWG--APTFVSVVTFGSCILLGIPLESGMILSALTTFKI-LQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDV 345 (1156)
Q Consensus 269 ~~~~~--~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~-l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~ 345 (1156)
.+... ....+.+++++.+. ..+.+++|.+++++.+... ...|+..++..+..+.+++++++||.++++.++.....
T Consensus 249 ~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~ 327 (574)
T PRK11160 249 ALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFP 327 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11111 11122334556665 4677899998887766544 34688888999999999999999999999875432111
Q ss_pred cccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---
Q 037346 346 LEKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--- 422 (1156)
Q Consensus 346 ~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--- 422 (1156)
.. .......+.|+++|++|+|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.
T Consensus 328 ~~-~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~ 405 (574)
T PRK11160 328 TT-STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIA 405 (574)
T ss_pred cc-cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhh
Confidence 01 1111223569999999999742 357999999999999999999999999999999999999999999999983
Q ss_pred ----------EEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 423 ----------KAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 423 ----------~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
++||||+|++|++||+|||.++.+ .+++++.++++.++++++++. |+|++|.+|++|.+||||||||+
T Consensus 406 ~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRi 484 (574)
T PRK11160 406 DYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRL 484 (574)
T ss_pred hCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHH
Confidence 799999999999999999999875 688899999999999999999 99999999999999999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
+||||++++|+++|||||||+||+++++.+.+.+.. .+++|+|+|||+++.++.||+|++|++|++++.|+|+|+++.+
T Consensus 485 alARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 564 (574)
T PRK11160 485 GIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQQ 564 (574)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhcC
Confidence 999999999999999999999999999999887655 4689999999999999999999999999999999999999988
Q ss_pred cchHHHHH
Q 037346 571 TDFMELVG 578 (1156)
Q Consensus 571 ~~~~~~~~ 578 (1156)
+.|.++++
T Consensus 565 g~y~~l~~ 572 (574)
T PRK11160 565 GRYYQLKQ 572 (574)
T ss_pred cHHHHHHh
Confidence 88887754
No 26
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.2e-63 Score=567.23 Aligned_cols=492 Identities=25% Similarity=0.325 Sum_probs=383.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-c----hhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
Q 037346 85 FIAILALLYTLATYVGPYLIDNFVQYLNGRQAFE-Y----EGYVLCLSERHW-----FFQVQQFGIRFRATLFAMIYNKG 154 (1156)
Q Consensus 85 ~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~-~----~g~~l~~~~~~~-----~~~~~~~~~~~r~~l~~~i~~k~ 154 (1156)
...++..+..++...+.+++..+++.+-..+... . .+++++++.+.+ -....+.+.++|..++..+++|.
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l 83 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKL 83 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666677777777777777776554332111 1 112222222222 23356788999999999999999
Q ss_pred hcCCccccCCCCHHHHHHHHHHHHHH------------------HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 155 LTLSGQAKQGNTSGEIINLIAVDAER------------------ALLIL---YKKLGLASIATLLATAIVMLANFPLGRL 213 (1156)
Q Consensus 155 l~l~~~~~~~~~~g~i~nl~s~D~~~------------------~~~ll---~~~lg~~~l~~~~~~~~~~~~~~~~~~~ 213 (1156)
.++++...++.++|+..+++..-++. .+.++ ++.-..++++-++++.++.++...++..
T Consensus 84 ~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~ 163 (559)
T COG4988 84 AKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLA 163 (559)
T ss_pred HhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888889999999999988877 11111 1111123333333333333344455666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 214 REKFQDKFMETKDRRIKATSEILRNMRILKLQGWE-------------LKKNETAWLKKSVYTEAMISFFCWGAPTFVSV 280 (1156)
Q Consensus 214 ~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e-------------~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (1156)
..+..++.++....-....-+.++|+.|+|.|+.. +|+..++.+|-.....++..++... .+.+..
T Consensus 164 a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~l-siAlvA 242 (559)
T COG4988 164 AKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYL-SIALVA 242 (559)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 66777777777777778888999999999999966 4455555555444444443333222 222233
Q ss_pred HHHHHHHHhC-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc-CCCCCCCccE
Q 037346 281 VTFGSCILLG-IPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEK-MPRGNSDTAI 358 (1156)
Q Consensus 281 ~~f~~~~~~~-~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~-~~~~~~~~~i 358 (1156)
++++ .-+.+ |+++....+.++.+-.-+..|++.+...++.-+.+..+.+.+..|++.|......... .........+
T Consensus 243 v~~g-~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei 321 (559)
T COG4988 243 VYIG-FRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEI 321 (559)
T ss_pred HHHH-HHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCcee
Confidence 3333 33455 6899999999999999999999999999999999999999999999987654332221 1111223345
Q ss_pred EEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------eEEE
Q 037346 359 EIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------TKAY 425 (1156)
Q Consensus 359 ~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------~~~~ 425 (1156)
+.+|++|.|++ ++++++|+||++++|+.++|||+||||||||+++|+|+++|++|+|.+|| +++|
T Consensus 322 ~~~~l~~~y~~--g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~ 399 (559)
T COG4988 322 SLENLSFRYPD--GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISW 399 (559)
T ss_pred eecceEEecCC--CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeee
Confidence 56699999985 33899999999999999999999999999999999999999999999998 3799
Q ss_pred EecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCee
Q 037346 426 VAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIF 504 (1156)
Q Consensus 426 v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~il 504 (1156)
|+|+|.+|++||||||.++++ .+++...++++..++.+++.. |+|.||.+||+|.+|||||+||++||||++++++++
T Consensus 400 v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~ 478 (559)
T COG4988 400 VSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLL 478 (559)
T ss_pred eCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEE
Confidence 999999999999999999987 678999999999999999999 999999999999999999999999999999999999
Q ss_pred eeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHHhhh
Q 037346 505 LLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVGAHK 581 (1156)
Q Consensus 505 llDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 581 (1156)
||||||++||.++++.|.+.+.+ .+++|+|+||||++.+..||+|++|++|+++++|+|+++.++++.|.+++..+.
T Consensus 479 llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~q~ 556 (559)
T COG4988 479 LLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQQE 556 (559)
T ss_pred EecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHHHh
Confidence 99999999999999999887765 578999999999999999999999999999999999999999999999987643
No 27
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.7e-63 Score=610.91 Aligned_cols=501 Identities=27% Similarity=0.347 Sum_probs=391.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-ccc-hhhHH------HHHHHHHHHHHHHHHHHHHHH
Q 037346 74 VLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQA-FEY-EGYVL------CLSERHWFFQVQQFGIRFRAT 145 (1156)
Q Consensus 74 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~-~~~-~g~~l------~~~~~~~~~~~~~~~~~~r~~ 145 (1156)
.+++ ++ .++...++.++..++....|+++..+++.+..... ... ..+.+ .+......+...+.+.++...
T Consensus 9 ~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 86 (567)
T COG1132 9 KYLK-YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVAD 86 (567)
T ss_pred HHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 67 88888889999999999999999999997762111 111 11111 222223334456666888999
Q ss_pred HHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH--------------H------HHHHHHHHHH-HHHHHHHHHHHHH
Q 037346 146 LFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER--------------A------LLILYKKLGL-ASIATLLATAIVM 204 (1156)
Q Consensus 146 l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~--------------~------~~ll~~~lg~-~~l~~~~~~~~~~ 204 (1156)
++..+|+|.++++...+++.++|++++++++|++. + ...+...+.| .+++.++..+++.
T Consensus 87 lr~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~ 166 (567)
T COG1132 87 LRRDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLA 166 (567)
T ss_pred HHHHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987 0 0000011111 1111111122222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHH----HHHHH----HHHHHHHHHHH--HH
Q 037346 205 LANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKK-NETA----WLKKS----VYTEAMISFFC--WG 273 (1156)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~-~e~~----~~~~~----~~~~~~~~~~~--~~ 273 (1156)
.+...+.+...+..++..+..++..+.+.|.++|+++||.|+.|.+. ++.. ...+. ....+...... ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (567)
T COG1132 167 LVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444456777777778888899999999999999999999321 1110 01111 11111111111 11
Q ss_pred HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCC
Q 037346 274 APTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGN 353 (1156)
Q Consensus 274 ~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~ 353 (1156)
...++.+++++.+.+..+.++.|.+.+++.++..+..|+..+...+..+..+..+.+|+.++++.++...+.... ...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~~ 324 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--LKD 324 (567)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC--CCC
Confidence 122344556677777788899999999999999999999999999999999999999999999985532211111 122
Q ss_pred CCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------
Q 037346 354 SDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT----------- 422 (1156)
Q Consensus 354 ~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~----------- 422 (1156)
..+.|+++|++|+|+. ++++|+|+||++++||.+|||||||||||||+++|+|+++|++|+|.+||.
T Consensus 325 ~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr 402 (567)
T COG1132 325 TIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLR 402 (567)
T ss_pred CCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHH
Confidence 3456999999999973 568999999999999999999999999999999999999999999999983
Q ss_pred --EEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhcc
Q 037346 423 --KAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQ 499 (1156)
Q Consensus 423 --~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~ 499 (1156)
++||||+|++|++||+|||.+|++ .++++..++++.+++++++..+|+|++|.|||+|.+||||||||++||||+++
T Consensus 403 ~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~ 482 (567)
T COG1132 403 KRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLR 482 (567)
T ss_pred HhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhc
Confidence 699999999999999999999987 68899999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHH
Q 037346 500 DADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVG 578 (1156)
Q Consensus 500 ~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 578 (1156)
+|+|+|||||||+||+++++.+.+.+.. .++||+|+|+||++.+..||+|++|++|+|++.|+|+|+++.++.|.+++.
T Consensus 483 ~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y~~l~~ 562 (567)
T COG1132 483 NPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLYARLYQ 562 (567)
T ss_pred CCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHHHHHHH
Confidence 9999999999999999999999887753 567899999999999999999999999999999999999999889999886
Q ss_pred hh
Q 037346 579 AH 580 (1156)
Q Consensus 579 ~~ 580 (1156)
.+
T Consensus 563 ~~ 564 (567)
T COG1132 563 AQ 564 (567)
T ss_pred Hh
Confidence 54
No 28
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-64 Score=625.42 Aligned_cols=432 Identities=16% Similarity=0.240 Sum_probs=347.5
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+...++|.++++++++.|..||+++++|++++|++ .|+..++..+...+..++..++.+++.+++++.++|+
T Consensus 90 ~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~-----~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 164 (588)
T PRK11174 90 AGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVL-----EQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWA 164 (588)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999 7777777777667777777778888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++.++++.+++...+.+..++..+...+..+...+.+.|.++|+++||+|+.|+.+.+++.+..++..+.......
T Consensus 165 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 244 (588)
T PRK11174 165 AGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLR 244 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776665555555555666666666666677788899999999999999999999999999998888877766555444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HH-----------------------------HcCCCccchHHHHHHHhHHHHHH
Q 037346 872 AMEWLRFCIDMLSSITFAFSLAF---LI-----------------------------SVPNGIIHPYKNLERKIISVERI 919 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~~~~---~~-----------------------------~~~~~~~~~~~~~~~~~~s~~Ri 919 (1156)
...+......++..+...+++.+ .+ .+..........+.....+.+|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri 324 (588)
T PRK11174 245 MAFLSSAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESL 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333332222221111110000 00 00001111124567778899999
Q ss_pred HHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcC--------------CCCceeeCCCCCCHHHHHHHHhhccc
Q 037346 920 LQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAP--------------NLPLVLRGRTGSGKSTLIQTLFRIVE 985 (1156)
Q Consensus 920 ~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~--------------~~~~vL~G~SGsGKSTL~~lL~rl~~ 985 (1156)
.++.+.+++++.. .......+..+.|+|+||+|.|.+ |+.++|+|+||||||||+++|+|+|
T Consensus 325 ~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~- 400 (588)
T PRK11174 325 VTFLETPLAHPQQ---GEKELASNDPVTIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL- 400 (588)
T ss_pred HHHHcCCCcccCC---CccccCCCCCceEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-
Confidence 9998876543211 000001123457899999887643 3445677999999999999999999
Q ss_pred CCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc--
Q 037346 986 STAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-- 1062 (1156)
Q Consensus 986 p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~-- 1062 (1156)
|++|+|++||+|+++++.+++|++|+||||||+||+|||||||.+++ +++|||+++|++.|+++++|.++|+||||.
T Consensus 401 p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vg 480 (588)
T PRK11174 401 PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIG 480 (588)
T ss_pred CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccc
Confidence 99999999999999999999999999999999999999999999985 588999999999999999999999999975
Q ss_pred ----------------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcE
Q 037346 1063 ----------------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGL 1126 (1156)
Q Consensus 1063 ----------------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~ 1126 (1156)
||||+++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++.+||+|+||++|+
T Consensus 481 e~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 481 DQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQ 560 (588)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCe
Confidence 8999999999999999999999999999999999989999999999999999999999999999
Q ss_pred EeeecChhHHhcCCCChHHHHHHHHhc
Q 037346 1127 IKEYDSPTKLLENKSSSFAQLVAEYTS 1153 (1156)
Q Consensus 1127 IvE~G~~~eLl~~~~g~f~~l~~~~~~ 1153 (1156)
|+|.|+|+||+++ +|.|++|++.+.+
T Consensus 561 i~e~G~~~eL~~~-~~~y~~l~~~q~~ 586 (588)
T PRK11174 561 IVQQGDYAELSQA-GGLFATLLAHRQE 586 (588)
T ss_pred EeecCCHHHHHhc-chHHHHHHHHhhc
Confidence 9999999999975 7899999987764
No 29
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-62 Score=619.24 Aligned_cols=508 Identities=19% Similarity=0.211 Sum_probs=396.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-----hhhHH-----HHHHHHHHHHHHHH
Q 037346 69 LRLAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY-----EGYVL-----CLSERHWFFQVQQF 138 (1156)
Q Consensus 69 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~-----~g~~l-----~~~~~~~~~~~~~~ 138 (1156)
.+.++..++.+++.+...++..++..++.++.|++++.++|.+........ .++++ .++.....+...++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHL 206 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556677788888888999999999999999999999997753322111 11111 11222223345677
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHH
Q 037346 139 GIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLASIATL 197 (1156)
Q Consensus 139 ~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~l~~~ 197 (1156)
+.++...++..+|+|.++++...+++.++|++++++ +|++. .++++++.-++.+++.+
T Consensus 207 ~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 285 (694)
T TIGR01846 207 TSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVI 285 (694)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999998 58876 00011111111112222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH------HH---HHHHHHHHHHHHHHH
Q 037346 198 LATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKK------NE---TAWLKKSVYTEAMIS 268 (1156)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~------~e---~~~~~~~~~~~~~~~ 268 (1156)
+++++.+.+...+.+..++..++.++..+++.+.+.|.++|+++||.++.|.+. .- .+...+.........
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (694)
T TIGR01846 286 GSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAG 365 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222333333344555666667777778888899999999999999999987111 00 011111111111111
Q ss_pred HHHHHH--HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 037346 269 FFCWGA--PTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVL 346 (1156)
Q Consensus 269 ~~~~~~--~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~ 346 (1156)
...... ...+.++++|++.+..+.+|.|.++++..+...+..|+..+...+..+.+++++++|+.++++.++.....
T Consensus 366 ~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~- 444 (694)
T TIGR01846 366 QAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA- 444 (694)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-
Confidence 111111 12234567888888889999999999999999999999999999999999999999999999876433211
Q ss_pred ccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe----
Q 037346 347 EKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT---- 422 (1156)
Q Consensus 347 ~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~---- 422 (1156)
...+.....+.|+++|++|+|+.+ ++++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.
T Consensus 445 ~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~ 523 (694)
T TIGR01846 445 GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAI 523 (694)
T ss_pred CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhh
Confidence 111111224569999999999743 357999999999999999999999999999999999999999999999984
Q ss_pred ---------EEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 423 ---------KAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 423 ---------~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
++||||+|++|++||+|||.++.+ .++++..++++.+++.+++..+|.|++|.+|++|.+||||||||++
T Consensus 524 ~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~ 603 (694)
T TIGR01846 524 ADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIA 603 (694)
T ss_pred CCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHH
Confidence 699999999999999999999864 6788999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCc
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGT 571 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 571 (1156)
||||++++|+++|||||||+||+.+++.+.+.+.. .+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++
T Consensus 604 lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~~ 683 (694)
T TIGR01846 604 IARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQG 683 (694)
T ss_pred HHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcCC
Confidence 99999999999999999999999999999887755 46899999999999999999999999999999999999998888
Q ss_pred chHHHHHh
Q 037346 572 DFMELVGA 579 (1156)
Q Consensus 572 ~~~~~~~~ 579 (1156)
.|.+++..
T Consensus 684 ~y~~l~~~ 691 (694)
T TIGR01846 684 LYARLWQQ 691 (694)
T ss_pred hHHHHHHh
Confidence 88887653
No 30
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=9.9e-63 Score=610.09 Aligned_cols=509 Identities=23% Similarity=0.293 Sum_probs=392.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc----hh-hHH-----HHHHHHHHHHHHHHH
Q 037346 70 RLAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY----EG-YVL-----CLSERHWFFQVQQFG 139 (1156)
Q Consensus 70 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~----~g-~~l-----~~~~~~~~~~~~~~~ 139 (1156)
+.++.+++.+++.+++.+++.++..++.++.|++++.++|.+........ .. +++ .+......+...+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (576)
T TIGR02204 7 AALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLG 86 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667777888888889999999999999999999997432221111 11 111 112222334556788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHH
Q 037346 140 IRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLASIATLL 198 (1156)
Q Consensus 140 ~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~l~~~~ 198 (1156)
.++...++..+|+|.++.+...+++.+.|++++++++|++. .+.++++.-.+.+++.++
T Consensus 87 ~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 166 (576)
T TIGR02204 87 ERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLL 166 (576)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 89999999999999999998888889999999999999987 000111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH------HH---HHHHHHHHHHHHHHHHH
Q 037346 199 ATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK------KN---ETAWLKKSVYTEAMISF 269 (1156)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r------~~---e~~~~~~~~~~~~~~~~ 269 (1156)
.+++.+.+...+.+...+..++.++..++..+.+.|.++|+++||.+++|.+ +. ..+...+..........
T Consensus 167 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (576)
T TIGR02204 167 AVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTA 246 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222223334456667777788888888889999999999999999999811 10 01111111111111111
Q ss_pred HHH--HHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccc-
Q 037346 270 FCW--GAPTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVL- 346 (1156)
Q Consensus 270 ~~~--~~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~- 346 (1156)
+.. .....+..+.++++.+..+.+|+|.++++..+...+..|+..++..+..+.+++++++||.++++.++..+...
T Consensus 247 ~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 326 (576)
T TIGR02204 247 IVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAH 326 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCC
Confidence 111 11223344557778788889999999999999999999999999999999999999999999998654311110
Q ss_pred ccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----
Q 037346 347 EKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG----- 421 (1156)
Q Consensus 347 ~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g----- 421 (1156)
......+..+.|+++|++|+|+..+++++|+|+||++++||.++|+|+||||||||+++|+|+++|++|+|.+||
T Consensus 327 ~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~ 406 (576)
T TIGR02204 327 PKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQ 406 (576)
T ss_pred CccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHh
Confidence 001111123469999999999853336899999999999999999999999999999999999999999999998
Q ss_pred --------eEEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 422 --------TKAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 422 --------~~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
.++|+||+|++|++||+|||.++.+ .++++..++++.+++.++++.+|+|++|.+|++|.+||||||||++
T Consensus 407 ~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~ 486 (576)
T TIGR02204 407 LDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIA 486 (576)
T ss_pred cCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHH
Confidence 4799999999999999999999875 5788899999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCc
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGT 571 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 571 (1156)
||||++++|+++|||||||+||+++++.+++.+.. .+++|+|+|||+++.++.||+|++|++|++++.|+++++.+.++
T Consensus 487 laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 487 IARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAKGG 566 (576)
T ss_pred HHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHcCC
Confidence 99999999999999999999999999988877655 46899999999999999999999999999999999999998877
Q ss_pred chHHHHH
Q 037346 572 DFMELVG 578 (1156)
Q Consensus 572 ~~~~~~~ 578 (1156)
.|.++..
T Consensus 567 ~~~~l~~ 573 (576)
T TIGR02204 567 LYARLAR 573 (576)
T ss_pred hHHHHHh
Confidence 7777653
No 31
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-65 Score=553.87 Aligned_cols=430 Identities=18% Similarity=0.338 Sum_probs=336.3
Q ss_pred HHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 037346 714 YKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVV-MSLVAWQV 792 (1156)
Q Consensus 714 ~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l 792 (1156)
....+.+--++|+|+..+++.|.-++.+|+++.-+. .-...+. .+.....++...++.+.+.++. ....+||+
T Consensus 288 QyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmd-----rGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wF 361 (790)
T KOG0056|consen 288 QYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMD-----RGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWF 361 (790)
T ss_pred HhHHHHHHHHHHHHHHhhceeeeecccccceeehhc-----cCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHH
Confidence 456778888999999999999999999999988876 3333322 3333333344444444433333 34468888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHH
Q 037346 793 LIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGA 872 (1156)
Q Consensus 793 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 872 (1156)
.++++....++..+.........+.+|....+-....+.-.+++-+.+|+|-|++|++..++|.+.+.++++..++....
T Consensus 362 gLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~s 441 (790)
T KOG0056|consen 362 GLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLAS 441 (790)
T ss_pred HHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777766654322222222233333333334456678999999999999999999999999999999988887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---------------------HHHH--cCCCccc-hHHHHHHHhHHHHHHHHhhcCCCC
Q 037346 873 MEWLRFCIDMLSSITFAFSLA---------------------FLIS--VPNGIIH-PYKNLERKIISVERILQCACIPSE 928 (1156)
Q Consensus 873 ~~~~~~~l~~~~~~~~~~~~~---------------------~~~~--~~~~~~~-~~~~~~~~~~s~~Ri~~~~~~~~e 928 (1156)
...+...-+.+..+....... +++. .+-+.++ -+..++++....|+++++++.++|
T Consensus 442 LnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~e 521 (790)
T KOG0056|consen 442 LNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPE 521 (790)
T ss_pred HHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCch
Confidence 666554443333222211111 1111 1111111 126788899999999998875554
Q ss_pred CcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCC--------------ceeeCCCCCCHHHHHHHHhhcccCCCceEEEc
Q 037346 929 PALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLP--------------LVLRGRTGSGKSTLIQTLFRIVESTAGHILID 994 (1156)
Q Consensus 929 ~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~--------------~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~id 994 (1156)
.. +.+..++-.-.+|.|+|+||+|.|+|+.| ++|+||||+||||++++|+||||.++|.|.||
T Consensus 522 Vv---d~P~a~pl~~~~G~i~fsnvtF~Y~p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iD 598 (790)
T KOG0056|consen 522 VV---DLPGAPPLKVTQGKIEFSNVTFAYDPGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITID 598 (790)
T ss_pred hh---cCCCCCCccccCCeEEEEEeEEecCCCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEc
Confidence 32 22222222335799999999999988776 35779999999999999999999999999999
Q ss_pred CeeCCCCChHHHhhcCeeeccccccccccchhccCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc-----------
Q 037346 995 GKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ----------- 1062 (1156)
Q Consensus 995 G~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~----------- 1062 (1156)
|+||+++..++||++||+||||.+||++||..||.++++ ++|||+.+|++.|++||-|.++|+||+|.
T Consensus 599 gqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGG 678 (790)
T KOG0056|consen 599 GQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGG 678 (790)
T ss_pred CchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCc
Confidence 999999999999999999999999999999999999875 56999999999999999999999999976
Q ss_pred -------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhH
Q 037346 1063 -------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTK 1135 (1156)
Q Consensus 1063 -------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~e 1135 (1156)
||++||+|.|++||||||+||..||+.||.++.+..+++|.|+|||||+||.+||.|+|+++|+|+|.|+|+|
T Consensus 679 EKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~Hee 758 (790)
T KOG0056|consen 679 EKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEE 758 (790)
T ss_pred chhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCChHHHHHHHHh
Q 037346 1136 LLENKSSSFAQLVAEYT 1152 (1156)
Q Consensus 1136 Ll~~~~g~f~~l~~~~~ 1152 (1156)
|+++++|.|+.||+.+|
T Consensus 759 Ll~rdgG~Ya~MWq~qq 775 (790)
T KOG0056|consen 759 LLKRDGGAYADMWQAQQ 775 (790)
T ss_pred HHhccCCcHHHHHHHHH
Confidence 99988999999997655
No 32
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.7e-62 Score=601.09 Aligned_cols=466 Identities=19% Similarity=0.202 Sum_probs=350.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-cch-hhH----HH----HHHHHHHHHHHHHHHHH
Q 037346 73 KVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAF-EYE-GYV----LC----LSERHWFFQVQQFGIRF 142 (1156)
Q Consensus 73 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~-~~~-g~~----l~----~~~~~~~~~~~~~~~~~ 142 (1156)
+.+.+.+++.++..+++.++..++..+.|++++.++|........ ... .++ +. +......+...+.+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (529)
T TIGR02868 5 LPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRS 84 (529)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777788888889999999999999999999976532211 111 110 11 11111223345677888
Q ss_pred HHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH-------H--------------HHHHHHHHHHHHHHHHHHHH
Q 037346 143 RATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER-------A--------------LLILYKKLGLASIATLLATA 201 (1156)
Q Consensus 143 r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~-------~--------------~~ll~~~lg~~~l~~~~~~~ 201 (1156)
...++..+|+|.++++...+++.++|++++++++|++. . ++++++.-+..+++.++.++
T Consensus 85 ~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~ 164 (529)
T TIGR02868 85 LGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLL 164 (529)
T ss_pred HHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999988 0 00001000111111111111
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH------HHHHHHH---HHHHHHHHHHHHHH
Q 037346 202 IVMLANFPL-GRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK------KNETAWL---KKSVYTEAMISFFC 271 (1156)
Q Consensus 202 ~~~~~~~~~-~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r------~~e~~~~---~~~~~~~~~~~~~~ 271 (1156)
++.++...+ .+......++..+..++..+.+.|.++|+++||.|++|.+ +...+.. .+.....+....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (529)
T TIGR02868 165 LAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQ 244 (529)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222122 2223444556667778889999999999999999999911 1100111 11111111111111
Q ss_pred HHH--HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccc-
Q 037346 272 WGA--PTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEK- 348 (1156)
Q Consensus 272 ~~~--~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~- 348 (1156)
... ...+..++++.+.+.++.+++|.+.+++.+...+..|+..++..+..+.+++++.+|+.++++.++..+.....
T Consensus 245 ~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~ 324 (529)
T TIGR02868 245 LLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPA 324 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCC
Confidence 111 12233456777777888999999999999999999999999999999999999999999999876432111000
Q ss_pred -CCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------
Q 037346 349 -MPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------ 421 (1156)
Q Consensus 349 -~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------ 421 (1156)
.+.....+.|+++|++|+|+. ++++|+|+||+|++||+++||||||||||||+++|+|+++|++|+|.+||
T Consensus 325 ~~~~~~~~~~I~~~~vsf~Y~~--~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~ 402 (529)
T TIGR02868 325 AGALGLGKPTLELRDLSFGYPG--SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL 402 (529)
T ss_pred CcccCCCCceEEEEEEEEecCC--CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH
Confidence 001112346999999999974 34699999999999999999999999999999999999999999999999
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+++||||+|++|++||+|||.+|.+ .++++++++++.+++++++..+|+|++|.+|++|.+||||||||++||
T Consensus 403 ~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiA 482 (529)
T TIGR02868 403 QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALA 482 (529)
T ss_pred HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHH
Confidence 6899999999999999999999865 688999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCC
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQV 540 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~ 540 (1156)
||++++|+|+|||||||+||+++++.+.+.+.. .+++|+|+||||+
T Consensus 483 Rall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 483 RALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999999999888765 4789999999985
No 33
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=7.5e-62 Score=598.61 Aligned_cols=504 Identities=17% Similarity=0.222 Sum_probs=386.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-hhh-HH-----HHHHHHHHHHHHHHHHHHHHHH
Q 037346 74 VLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY-EGY-VL-----CLSERHWFFQVQQFGIRFRATL 146 (1156)
Q Consensus 74 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~-~g~-~l-----~~~~~~~~~~~~~~~~~~r~~l 146 (1156)
.+++.+++.++..+++.++..++..+.|++++.++|.+........ ..+ ++ .+......+...++..+++..+
T Consensus 12 ~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (585)
T TIGR01192 12 SYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATL 91 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888899999999999999999999999997754322111 111 11 1111112233456777888888
Q ss_pred HHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHHH---------------H-------HHHHHHHHHHHHHHHHHHHHHH
Q 037346 147 FAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAERA---------------L-------LILYKKLGLASIATLLATAIVM 204 (1156)
Q Consensus 147 ~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~~---------------~-------~ll~~~lg~~~l~~~~~~~~~~ 204 (1156)
+..+|+|.++++...+++.++|++++++++|++.. + ++++.... .+++.++++++..
T Consensus 92 r~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-l~li~l~~~~~~~ 170 (585)
T TIGR01192 92 LTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWR-LSIVLMVLGILYI 170 (585)
T ss_pred HHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 89999999999999999999999999999998760 0 00011111 1111112222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH------HHHHHHHH---HHHHHHHHHHHHH--H
Q 037346 205 LANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKK------NETAWLKK---SVYTEAMISFFCW--G 273 (1156)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~------~e~~~~~~---~~~~~~~~~~~~~--~ 273 (1156)
.+...+.+...+..++..+..++..+.+.|.++|+++||.|+.|.+. ...+..+. .....+....+.. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (585)
T TIGR01192 171 LIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMAS 250 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455556666666777777889999999999999999987111 10011000 0111111111111 1
Q ss_pred HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCC
Q 037346 274 APTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGN 353 (1156)
Q Consensus 274 ~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~ 353 (1156)
....+.++++|.+.+..+.+++|.+++++.++..+..|+..+...+..+.+++.+++|+.++++.++.........+...
T Consensus 251 ~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~ 330 (585)
T TIGR01192 251 TISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADAPELPN 330 (585)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccCCCCCC
Confidence 11223455678888888999999999999999999999999999999999999999999999986533211111011111
Q ss_pred CCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------
Q 037346 354 SDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT----------- 422 (1156)
Q Consensus 354 ~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~----------- 422 (1156)
..+.++++|++|+|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 331 ~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~ 408 (585)
T TIGR01192 331 VKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLR 408 (585)
T ss_pred CCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHH
Confidence 2346999999999973 346899999999999999999999999999999999999999999999983
Q ss_pred --EEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhcc
Q 037346 423 --KAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQ 499 (1156)
Q Consensus 423 --~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~ 499 (1156)
++||||+|++|++|++|||.++.+ .++++..++++.+++.+++..+|+|++|.+|++|.+||||||||++|||||++
T Consensus 409 ~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~ 488 (585)
T TIGR01192 409 KSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILK 488 (585)
T ss_pred hheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhc
Confidence 699999999999999999999864 56788888999999999999999999999999999999999999999999999
Q ss_pred CCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHH
Q 037346 500 DADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVG 578 (1156)
Q Consensus 500 ~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 578 (1156)
+|+++|||||||+||+++++.+.+.+.. .+++|+|+|||+++.++.||+|++|++|++++.|+++++.+.++.|.+++.
T Consensus 489 ~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~ 568 (585)
T TIGR01192 489 NAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDGRFYKLLR 568 (585)
T ss_pred CCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCChHHHHHH
Confidence 9999999999999999999999877654 468999999999999989999999999999999999999988888888775
Q ss_pred hh
Q 037346 579 AH 580 (1156)
Q Consensus 579 ~~ 580 (1156)
.+
T Consensus 569 ~~ 570 (585)
T TIGR01192 569 RS 570 (585)
T ss_pred hC
Confidence 43
No 34
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.5e-62 Score=598.48 Aligned_cols=489 Identities=22% Similarity=0.334 Sum_probs=374.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-cc-c---chhhHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037346 89 LALLYTLATYVGPYLIDNFVQYLNGRQ-AF-E---YEGYVL------CLSERHWFFQVQQFGIRFRATLFAMIYNKGLTL 157 (1156)
Q Consensus 89 ~~~~~~~~~~~~p~ll~~~i~~~~~~~-~~-~---~~g~~l------~~~~~~~~~~~~~~~~~~r~~l~~~i~~k~l~l 157 (1156)
+.++..++..+.|++++.++|.+.... .. . +.++++ .++.....+...+.+.++...++..+|+|++++
T Consensus 3 ~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~ 82 (569)
T PRK10789 3 LLIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQ 82 (569)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 345666777889999999999765321 11 1 111111 111122223445677888889999999999999
Q ss_pred CccccCCCCHHHHHHHHHHHHHHH---------------H------HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 158 SGQAKQGNTSGEIINLIAVDAERA---------------L------LILYKKLGL-ASIATLLATAIVMLANFPLGRLRE 215 (1156)
Q Consensus 158 ~~~~~~~~~~g~i~nl~s~D~~~~---------------~------~ll~~~lg~-~~l~~~~~~~~~~~~~~~~~~~~~ 215 (1156)
+...+++.++|++++++++|++.. + ++++..++| .+++.++++++.+.+...+.+...
T Consensus 83 ~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~ 162 (569)
T PRK10789 83 HPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLH 162 (569)
T ss_pred CHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888999999999999999870 0 000011111 111112222222333334455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH------HHHHHHHH---HHHHHHHHHHHHHHH--HHHHHHHHHHH
Q 037346 216 KFQDKFMETKDRRIKATSEILRNMRILKLQGWELK------KNETAWLK---KSVYTEAMISFFCWG--APTFVSVVTFG 284 (1156)
Q Consensus 216 ~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r------~~e~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~f~ 284 (1156)
+..++..+..++..+.+.|.++|+++||.|++|.+ +...+..+ +.....+....+... ....+..+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 242 (569)
T PRK10789 163 ERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGG 242 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666677778899999999999999999911 11001111 111111111111111 11223345677
Q ss_pred HHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCccEEEeeeE
Q 037346 285 SCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSDTAIEIIDGS 364 (1156)
Q Consensus 285 ~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 364 (1156)
.+.+.++.+|+|.+++++.+...+..|+..++..+..+.+++++.+||.++++.++....... +.....+.|+++|++
T Consensus 243 ~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~--~~~~~~~~I~~~~v~ 320 (569)
T PRK10789 243 SWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSE--PVPEGRGELDVNIRQ 320 (569)
T ss_pred HHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC--CCCCCCCcEEEEEEE
Confidence 788888999999999999999999999999999999999999999999999987543221111 111123469999999
Q ss_pred EEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EEEEecCCc
Q 037346 365 FSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KAYVAQSPW 431 (1156)
Q Consensus 365 f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~~v~Q~~~ 431 (1156)
|+|+.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|++|+|+
T Consensus 321 ~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~ 399 (569)
T PRK10789 321 FTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF 399 (569)
T ss_pred EECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCe
Confidence 999742 457999999999999999999999999999999999999999999999983 699999999
Q ss_pred CCCccHHHHhhcCC-CCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCC
Q 037346 432 IQSGKIEENILFGK-EMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPF 510 (1156)
Q Consensus 432 ~~~~ti~eni~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~ 510 (1156)
+|++|++|||.++. +.++++++++++.+++.+++..+|+|++|.+|++|.+||||||||++||||++++|+++||||||
T Consensus 400 lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpt 479 (569)
T PRK10789 400 LFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDAL 479 (569)
T ss_pred eccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcc
Confidence 99999999999985 46788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHHhh
Q 037346 511 SPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVGAH 580 (1156)
Q Consensus 511 s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 580 (1156)
|+||+++++.+.+.+.. .+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++.|.+++..+
T Consensus 480 s~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 480 SAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 99999999999887654 47899999999999999999999999999999999999998888888877654
No 35
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.7e-62 Score=644.71 Aligned_cols=505 Identities=22% Similarity=0.232 Sum_probs=372.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-----cchhhHH------HHHHHHHHHHHHHHHHHHH
Q 037346 75 LFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAF-----EYEGYVL------CLSERHWFFQVQQFGIRFR 143 (1156)
Q Consensus 75 l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~-----~~~g~~l------~~~~~~~~~~~~~~~~~~r 143 (1156)
.++.+++.+++++++.++..++..+.|+++..+++.+...... .+..+++ .++.....+...+.+.++.
T Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~ 898 (1466)
T PTZ00265 819 EIFSYKKDVTIIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVE 898 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666688888888899999999999999999865322110 1111111 1222223345677888999
Q ss_pred HHHHHHHHHHHhcCCccccCC--CCHHHHHHHHHHHHHH-------HHHHHH-------HH----HHHHHHHHHHHHHHH
Q 037346 144 ATLFAMIYNKGLTLSGQAKQG--NTSGEIINLIAVDAER-------ALLILY-------KK----LGLASIATLLATAIV 203 (1156)
Q Consensus 144 ~~l~~~i~~k~l~l~~~~~~~--~~~g~i~nl~s~D~~~-------~~~ll~-------~~----lg~~~l~~~~~~~~~ 203 (1156)
..++..+|+++++++...+++ +++|++++++++|++. .+..+. .. +-+...+++++++++
T Consensus 899 ~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~ 978 (1466)
T PTZ00265 899 KTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTY 978 (1466)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988875 8899999999999987 000000 00 001111111111111
Q ss_pred HHHHHHHHHHHHHH-HHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHhHHHH---HH--HHHHHHHH
Q 037346 204 MLANFPLGRLREKF-QDKFM-----------------ETKDRRIKATSEILRNMRILKLQGWELK---KN--ETAWLKKS 260 (1156)
Q Consensus 204 ~~~~~~~~~~~~~~-~~~~~-----------------~~~d~r~~~~~e~l~~i~~IK~~~~e~r---~~--e~~~~~~~ 260 (1156)
.++...+.+..... .++.. +..++....++|.++||++||.|+.|.+ +- ..+...+.
T Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~ 1058 (1466)
T PTZ00265 979 FIFMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKG 1058 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 11111122211111 11111 1123346789999999999999999911 11 11111111
Q ss_pred H----HHHHHHHHHHHHH--HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 261 V----YTEAMISFFCWGA--PTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIAS 334 (1156)
Q Consensus 261 ~----~~~~~~~~~~~~~--~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~ 334 (1156)
. ...++...+.... ...+.++++|++++..+.++.+.+++++.++.....++..+...+..+.+++++++|+.+
T Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ 1138 (1466)
T PTZ00265 1059 QKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYP 1138 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111111 123456688889888999999999998877666667788899999999999999999999
Q ss_pred HhccCCCC-ccccccCC---CCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCC
Q 037346 335 FLCLEGLQ-TDVLEKMP---RGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGV 410 (1156)
Q Consensus 335 fl~~~~~~-~~~~~~~~---~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~ 410 (1156)
+++.++.. ........ .....+.|+|+||+|+|+.+++.++|+|+||+|++|+++|||||||||||||+++|+|+|
T Consensus 1139 ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~y 1218 (1466)
T PTZ00265 1139 LIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFY 1218 (1466)
T ss_pred HHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhC
Confidence 99875321 11000010 112335799999999998655568999999999999999999999999999999999999
Q ss_pred CC------------------------------------------------------CCcEEEEcCe-------------E
Q 037346 411 PK------------------------------------------------------ESGIIRLCGT-------------K 423 (1156)
Q Consensus 411 ~~------------------------------------------------------~~G~i~~~g~-------------~ 423 (1156)
+| ++|+|.+||. +
T Consensus 1219 dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i 1298 (1466)
T PTZ00265 1219 DLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLF 1298 (1466)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhc
Confidence 98 6999999983 7
Q ss_pred EEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 424 AYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 424 ~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
+||+|+|.+|++||+|||.+|.+ .+++.++++++.+++++++..+|+|++|.||++|.+|||||||||||||||+++|+
T Consensus 1299 ~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ 1378 (1466)
T PTZ00265 1299 SIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPK 1378 (1466)
T ss_pred cEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999965 67889999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHhc---CCCEEEEEccCCCccccCCEEEEEeC----CeEE-EccChHHHHh-cCcch
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWVS---SSKTVIYATHQVEFLPAADLILVIKD----GKIT-QAGKYSDILN-SGTDF 573 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~~---~~~tvi~vtH~~~~~~~~d~i~~l~~----G~i~-~~g~~~~l~~-~~~~~ 573 (1156)
|||||||||+||+++++.|.+.+... +++|+|+||||++.++.||+|++|++ |+++ ++|+|+|+++ .++.|
T Consensus 1379 ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y 1458 (1466)
T PTZ00265 1379 ILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVY 1458 (1466)
T ss_pred EEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChH
Confidence 99999999999999999998776553 58999999999999999999999999 9954 8999999997 47888
Q ss_pred HHHHHh
Q 037346 574 MELVGA 579 (1156)
Q Consensus 574 ~~~~~~ 579 (1156)
.++++.
T Consensus 1459 ~~l~~~ 1464 (1466)
T PTZ00265 1459 KKYVKL 1464 (1466)
T ss_pred HHHHhh
Confidence 887754
No 36
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=9.4e-63 Score=620.07 Aligned_cols=426 Identities=20% Similarity=0.275 Sum_probs=345.8
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+...+++.+++++++++|+.||+++++|++++|++ |...++..+...+...+..+..+++.+++++.++|+
T Consensus 203 ~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (686)
T TIGR03797 203 LETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM------GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWK 276 (686)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688889999999999999999999999999999996 344455545455555555566666777888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++.++++++++..++.+..+...+......+...+++.|+++|+.+||+++.|+++.++|.+..++..+..+....
T Consensus 277 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 356 (686)
T TIGR03797 277 LALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQR 356 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776666555555555555555555566666677889999999999999999999999999999999988888777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HH---------------------HcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSITFAFSLAF---LI---------------------SVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~~~~---~~---------------------~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
...|.......+..+..+++..+ ++ .+.........++.....+.+|+.++++.++
T Consensus 357 ~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 436 (686)
T TIGR03797 357 IENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALP 436 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 66665555444332222211111 00 0011112223567778889999999988766
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCC---------------ceeeCCCCCCHHHHHHHHhhcccCCCceEE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLP---------------LVLRGRTGSGKSTLIQTLFRIVESTAGHIL 992 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~---------------~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~ 992 (1156)
|.+.. .. ...+..|.|+|+||+|+|+++.+ ++++|+||||||||+++|+|+|+|++|+|+
T Consensus 437 e~~~~---~~--~~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 511 (686)
T TIGR03797 437 EVDEA---KT--DPGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVF 511 (686)
T ss_pred ccccC---cC--CCCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEE
Confidence 54211 11 11123578999999999964333 456699999999999999999999999999
Q ss_pred EcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc----------
Q 037346 993 IDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ---------- 1062 (1156)
Q Consensus 993 idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~---------- 1062 (1156)
+||+|+++++.+++|++|++|||||++|+|||||||.++++.+|+++++|++.+++++++.++|+|+||.
T Consensus 512 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSG 591 (686)
T TIGR03797 512 YDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSG 591 (686)
T ss_pred ECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCH
Confidence 9999999999999999999999999999999999999987788999999999999999999999999975
Q ss_pred --------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChh
Q 037346 1063 --------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPT 1134 (1156)
Q Consensus 1063 --------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~ 1134 (1156)
||||+++|+|||||||||+||++||+.|++.|++. ++|+|+||||++++..||+|+||++|+|+|.|+|+
T Consensus 592 GQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~ 669 (686)
T TIGR03797 592 GQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYD 669 (686)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHH
Confidence 89999999999999999999999999999999987 68999999999999999999999999999999999
Q ss_pred HHhcCCCChHHHHHHHH
Q 037346 1135 KLLENKSSSFAQLVAEY 1151 (1156)
Q Consensus 1135 eLl~~~~g~f~~l~~~~ 1151 (1156)
||+++ +|.|++|++++
T Consensus 670 ~Ll~~-~~~y~~l~~~q 685 (686)
T TIGR03797 670 ELMAR-EGLFAQLARRQ 685 (686)
T ss_pred HHHhC-CcHHHHHHHhc
Confidence 99975 79999999854
No 37
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.3e-63 Score=620.70 Aligned_cols=425 Identities=21% Similarity=0.331 Sum_probs=346.4
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+...++|.+++++++++|+.||+++++|++++|++ .|+..++..+...+..++..++.+++.+++++..+|+
T Consensus 228 ~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~-----~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~ 302 (711)
T TIGR00958 228 TMARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLS-----SDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPR 302 (711)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 45678889999999999999999999999999999999 7888888777777888888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++..+++.+++...+.+..++..+...+..+...+++.|+++|+++||+|+.|+++.++|.+..++..+...+...
T Consensus 303 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 382 (711)
T TIGR00958 303 LTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKAL 382 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98877666666666777777777777777777788899999999999999999999999999999988887766544332
Q ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHH---------------------cCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 A---MEWLRFCIDMLSSITFAFSLAFLIS---------------------VPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~---~~~~~~~l~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
. ..|....+..+..+.+.......+. +.........++.+...+.+|+.++.+.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 462 (711)
T TIGR00958 383 AYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKP 462 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2 2232222222211111111111110 001111223567788899999999988765
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcC----------------CCCceeeCCCCCCHHHHHHHHhhcccCCCceE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAP----------------NLPLVLRGRTGSGKSTLIQTLFRIVESTAGHI 991 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~----------------~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I 991 (1156)
+.+.. . ....++..|.|+|+||+|+|+. |+.++|+|+||||||||+++|+|+|+|++|+|
T Consensus 463 ~~~~~--~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I 538 (711)
T TIGR00958 463 NIPLT--G--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQV 538 (711)
T ss_pred CCCCC--C--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE
Confidence 53211 1 1112344678999999999963 22346779999999999999999999999999
Q ss_pred EEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc--------
Q 037346 992 LIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------- 1062 (1156)
Q Consensus 992 ~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~-------- 1062 (1156)
++||+|+++++.+++|++|++|||||++|+|||||||.++. +.+||++++|++.+++++++.++|+|+||.
T Consensus 539 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~L 618 (711)
T TIGR00958 539 LLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQL 618 (711)
T ss_pred EECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcC
Confidence 99999999999999999999999999999999999999874 467999999999999999999999999975
Q ss_pred ----------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecC
Q 037346 1063 ----------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1063 ----------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~ 1132 (1156)
|||++++|+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+
T Consensus 619 SGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 619 SGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 899999999999999999999999999999 33457899999999999999999999999999999999
Q ss_pred hhHHhcCCCChHHHHH
Q 037346 1133 PTKLLENKSSSFAQLV 1148 (1156)
Q Consensus 1133 ~~eLl~~~~g~f~~l~ 1148 (1156)
|+||+++ +|.|++|+
T Consensus 697 ~~eL~~~-~~~y~~lv 711 (711)
T TIGR00958 697 HKQLMED-QGCYKHLV 711 (711)
T ss_pred HHHHHhC-CCchHhcC
Confidence 9999975 68999874
No 38
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.2e-62 Score=621.25 Aligned_cols=427 Identities=24% Similarity=0.342 Sum_probs=341.1
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+...+++.++++++++.|+.||+++++|++++|++ |...+...+...+..++..++.+++.++++++++|+
T Consensus 223 ~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 296 (708)
T TIGR01193 223 LGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT------DASSIIDALASTILSLFLDMWILVIVGLFLVRQNML 296 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 45678889999999999999999999999999999997 223333333333444455555666677778888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++..+++++++...+.+..++..+......+...+.+.|+++|+++||+||.|+.+.+++.+..++..+..+....
T Consensus 297 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 376 (708)
T TIGR01193 297 LFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQK 376 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877766666666666677777777777778888899999999999999999999999999999888877776665544
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHH---------------------HcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSI---TFAFSLAFLI---------------------SVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~---~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
...+......++..+ .+..+..+++ .+.........+++....+++|+.++.+.++
T Consensus 377 ~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 456 (708)
T TIGR01193 377 ADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDS 456 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 433333222222111 1111111110 1111112223567778899999999998877
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcCC--------------CCceeeCCCCCCHHHHHHHHhhcccCCCceEEE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAPN--------------LPLVLRGRTGSGKSTLIQTLFRIVESTAGHILI 993 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~--------------~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~i 993 (1156)
|.+... .....++..|.|+|+||+|+|+++ +.++|+|+||||||||+++|+|+|+|++|+|++
T Consensus 457 e~~~~~---~~~~~~~~~~~I~~~~vsf~y~~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~i 533 (708)
T TIGR01193 457 EFINKK---KRTELNNLNGDIVINDVSYSYGYGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILL 533 (708)
T ss_pred cccccc---cccCCCCCCCcEEEEEEEEEcCCCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEE
Confidence 643211 111223446789999999999643 334677999999999999999999999999999
Q ss_pred cCeeCCCCChHHHhhcCeeeccccccccccchhccCCC--CCCCHHHHHHHHHHcCCChHHHhhcCCcccc---------
Q 037346 994 DGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPL--EEHADEQIWEALDKCQLGDEVRKKKGKLDSQ--------- 1062 (1156)
Q Consensus 994 dG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~--~~~~deei~~al~~~~l~~~i~~lp~gl~s~--------- 1062 (1156)
||+|+++++.+++|++|+||||||+||+|||||||.++ ++.+|+++++|++.+++++++.++|+||||.
T Consensus 534 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LS 613 (708)
T TIGR01193 534 NGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSIS 613 (708)
T ss_pred CCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCC
Confidence 99999999999999999999999999999999999987 3578999999999999999999999999975
Q ss_pred ---------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecCh
Q 037346 1063 ---------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSP 1133 (1156)
Q Consensus 1063 ---------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~ 1133 (1156)
|||++++|+|||||||||+||++||+.|++.|++. +++|+|+||||++++..||+|+||++|+|+|.|+|
T Consensus 614 gGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~ 692 (708)
T TIGR01193 614 GGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSH 692 (708)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCH
Confidence 89999999999999999999999999999999975 78999999999999999999999999999999999
Q ss_pred hHHhcCCCChHHHHHH
Q 037346 1134 TKLLENKSSSFAQLVA 1149 (1156)
Q Consensus 1134 ~eLl~~~~g~f~~l~~ 1149 (1156)
+||+++ +|.|++|++
T Consensus 693 ~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 693 DELLDR-NGFYASLIH 707 (708)
T ss_pred HHHHhc-CCcHHHHhh
Confidence 999985 799999985
No 39
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.3e-63 Score=570.69 Aligned_cols=464 Identities=23% Similarity=0.326 Sum_probs=349.3
Q ss_pred cEEEeeeEEEeCCCCC-CCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC----CcEEEEcCe---------
Q 037346 357 AIEIIDGSFSWDFSSP-NPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE----SGIIRLCGT--------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~-~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~----~G~i~~~g~--------- 422 (1156)
.++++|++..|..... ..+++|+||++.+||++||||+|||||||+.++|+|++++. +|+|.++|+
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999976532 25999999999999999999999999999999999999987 799999883
Q ss_pred --------EEEEecCCc-CCC--ccHHHHhh----cCCC----CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCC
Q 037346 423 --------KAYVAQSPW-IQS--GKIEENIL----FGKE----MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINL 483 (1156)
Q Consensus 423 --------~~~v~Q~~~-~~~--~ti~eni~----~~~~----~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~L 483 (1156)
++|++|+|+ .+| .||.+-|. .... ...++..+.++..+|.+.... +....+|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 799999996 333 46665554 2221 123455667777888665433 2345799
Q ss_pred CHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEE
Q 037346 484 SGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQ 559 (1156)
Q Consensus 484 SgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~ 559 (1156)
|||||||+.||+||..+|++||+||||++||+.++.+|.+.+.. ..|.++|+||||+..+.+ ||+|+||++|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 99999999999999999999999999999999999999886643 568999999999999875 99999999999999
Q ss_pred ccChHHHHhcCcc-hHHHH-HhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcch
Q 037346 560 AGKYSDILNSGTD-FMELV-GAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLV 637 (1156)
Q Consensus 560 ~g~~~~l~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (1156)
.|+.++++++..+ |...+ .+.... .. ... .
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll~a~p~~-------------~~-------------------------~~~----------~ 267 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLLAAVPRL-------------GD-------------------------EKI----------I 267 (539)
T ss_pred ecCHHHHHhccCCcccHHHHhhCCCc-------------cc-------------------------ccc----------c
Confidence 9999999864321 11110 000000 00 000 0
Q ss_pred hHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHH
Q 037346 638 QEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTA 717 (1156)
Q Consensus 638 ~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1156)
... ..+.
T Consensus 268 ~~~--~~~~----------------------------------------------------------------------- 274 (539)
T COG1123 268 RLP--RRGP----------------------------------------------------------------------- 274 (539)
T ss_pred ccc--cccc-----------------------------------------------------------------------
Confidence 000 0000
Q ss_pred HHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 718 TQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFV 797 (1156)
Q Consensus 718 ~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~ 797 (1156)
.. . ..+..++.
T Consensus 275 ---------------~~--------------~-----~~ll~V~~----------------------------------- 285 (539)
T COG1123 275 ---------------LR--------------A-----EPLLSVRN----------------------------------- 285 (539)
T ss_pred ---------------cc--------------c-----CceeEeee-----------------------------------
Confidence 00 0 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 037346 798 PVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLR 877 (1156)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (1156)
T Consensus 286 -------------------------------------------------------------------------------- 285 (539)
T COG1123 286 -------------------------------------------------------------------------------- 285 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEE
Q 037346 878 FCIDMLSSITFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRY 957 (1156)
Q Consensus 878 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y 957 (1156)
+......+. .. ........-.++||||..
T Consensus 286 -----------------------------------------l~k~y~~~~---------~~-~~~~~~~~~Av~~VSf~l 314 (539)
T COG1123 286 -----------------------------------------LSKRYGSRK---------GL-FVRERGEVKAVDDVSFDL 314 (539)
T ss_pred -----------------------------------------eeeeecccc---------cc-ccccccceeeeeeeeeEe
Confidence 000000000 00 000001123789999999
Q ss_pred cCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCee--CCCCChHHHhhcCeeeccccccc---cccchhccC-CC
Q 037346 958 APNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKD--ISLIGLHDLRTRLSIIPQDPTMF---EGTTRSNLD-PL 1031 (1156)
Q Consensus 958 ~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~d--i~~i~~~~LR~~i~~VpQdp~LF---~gTIr~Nl~-~~ 1031 (1156)
.+++.++|+|+||||||||.++|+|+.+|++|+|.++|.| ++.-....+|+++-+|+|||+-. ..||+++|. |.
T Consensus 315 ~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL 394 (539)
T COG1123 315 REGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPL 394 (539)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHH
Confidence 9999999999999999999999999999999999999977 34334566888999999999743 469999984 21
Q ss_pred ---CCC--C--HHHHHHHHHHcCCCh-HHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHH
Q 037346 1032 ---EEH--A--DEQIWEALDKCQLGD-EVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQ 1096 (1156)
Q Consensus 1032 ---~~~--~--deei~~al~~~~l~~-~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~ 1096 (1156)
... . .+.+.+.++.++|.. +....|..+.-+ ||||..+|++||+|||||+||+-+.+.|.+.|.+
T Consensus 395 ~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~ 474 (539)
T COG1123 395 RIHGGGSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKD 474 (539)
T ss_pred hhhcccchHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHH
Confidence 111 1 345888899999987 677778777644 8999999999999999999999999999999987
Q ss_pred hcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHH
Q 037346 1097 HFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAE 1150 (1156)
Q Consensus 1097 ~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~ 1150 (1156)
+.+ +.|.|+|+|+++.++. ||||+||++|+|||.|+.++..+++...|.+..-+
T Consensus 475 lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 475 LQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred HHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 653 6899999999999986 99999999999999999999999988888876654
No 40
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=7.3e-61 Score=587.14 Aligned_cols=482 Identities=21% Similarity=0.258 Sum_probs=367.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc----ch-hhHH-----HHHHHHHHHHHHHHHHHHHHHHH
Q 037346 78 SAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFE----YE-GYVL-----CLSERHWFFQVQQFGIRFRATLF 147 (1156)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~----~~-g~~l-----~~~~~~~~~~~~~~~~~~r~~l~ 147 (1156)
.+++.++..+++.++..++.++.|++++.++|.+....... +. ++++ .++.....+...+.+.++...++
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888899999999999999999999764222111 11 1111 22222334456778889999999
Q ss_pred HHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH------H---------------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 148 AMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER------A---------------LLILYKKLGLASIATLLATAIVMLA 206 (1156)
Q Consensus 148 ~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~------~---------------~~ll~~~lg~~~l~~~~~~~~~~~~ 206 (1156)
..+|+|.++++... .+...+.+++|++. . +.+++..-++.+++.++.+++++++
T Consensus 83 ~~~~~~ll~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~i 157 (544)
T TIGR01842 83 QPIFAASFSATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILALGGAVVLVGL 157 (544)
T ss_pred HHHHHHHhcCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999999998632 24557777888877 0 0001100011111111111222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH------HHHHHH---HHHHHHHHHHHHHHHHH--HH
Q 037346 207 NFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK------KNETAW---LKKSVYTEAMISFFCWG--AP 275 (1156)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r------~~e~~~---~~~~~~~~~~~~~~~~~--~~ 275 (1156)
.....+..++..++.++..+++.+.+.|.++|+++||.|++|.+ +...+. ..+.....+....+... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (544)
T TIGR01842 158 ALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIV 237 (544)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344556666777888888999999999999999999998811 111111 11111111111111111 11
Q ss_pred HHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCC
Q 037346 276 TFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSD 355 (1156)
Q Consensus 276 ~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~ 355 (1156)
..+.+++++.+.+..+.+|+|.+++++.++..+..|+..++..+..+.+++++.+|+.++++.++..... . +.....
T Consensus 238 ~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-~--~~~~~~ 314 (544)
T TIGR01842 238 LQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA-M--PLPEPE 314 (544)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-C--CCCCCC
Confidence 2234556888888889999999999999999999999999999999999999999999999765432211 1 111123
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------e
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------T 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------~ 422 (1156)
+.++++|++|+|+.. ++++|+|+||++++|+.++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 315 ~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~ 393 (544)
T TIGR01842 315 GHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKH 393 (544)
T ss_pred CeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhh
Confidence 469999999999742 35799999999999999999999999999999999999999999999998 3
Q ss_pred EEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCC
Q 037346 423 KAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDA 501 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~ 501 (1156)
++||||+|++|++|++|||.++.+ .+++++.++++.++++++++.+|+|++|.+|++|.+||||||||++||||++++|
T Consensus 394 i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~ 473 (544)
T TIGR01842 394 IGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDP 473 (544)
T ss_pred eEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCC
Confidence 799999999999999999996654 7888999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeeCCCCCcCHHHHHHHHHHHHhc--CCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHh
Q 037346 502 DIFLLDDPFSPVDDHTGAHLFKFCWVS--SSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 502 ~illlDep~s~lD~~~~~~i~~~~~~~--~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
+++|||||||+||+++++.+.+.+... +++|+|++||+++.+..||+|++|++|++++.|+++++++
T Consensus 474 ~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 474 KLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999998876543 5799999999999888899999999999999999998864
No 41
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=8.9e-62 Score=602.21 Aligned_cols=431 Identities=24% Similarity=0.359 Sum_probs=343.6
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+...++|.+++++++++|.+||+++++|++++|++ .|...++..+...+..++..++.+++.++++++.+|+
T Consensus 92 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~-----~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (592)
T PRK10790 92 AAVGVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVT-----NDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWR 166 (592)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566788999999999999999999999999999999 7777777777777777778888888888888889998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++..+++.+++...+.+..+...+......+...+++.|+++|+.+||+|+.++++.+++.+..++..+.......
T Consensus 167 l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (592)
T PRK10790 167 MALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLR 246 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87655444333333444444444555555556677889999999999999999999999999999887776665544433
Q ss_pred HHHHH-HHHHHHHHHHHHHHHH-HH----------------------HHHcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWL-RFCIDMLSSITFAFSL-AF----------------------LISVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~-~~~l~~~~~~~~~~~~-~~----------------------~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
...+. .....++..+...++. .. +..+.........+++....+.+|+.++.+.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 326 (592)
T PRK10790 247 LDGFLLRPLLSLFSALILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPR 326 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 33221 1111111111100000 00 000011111223567788899999999987654
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcCC--------------CCceeeCCCCCCHHHHHHHHhhcccCCCceEEE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAPN--------------LPLVLRGRTGSGKSTLIQTLFRIVESTAGHILI 993 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~--------------~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~i 993 (1156)
++... . ..++..+.|+|+||+|+|+++ +.++|+|+||||||||+++|+|+|+|++|+|.+
T Consensus 327 ~~~~~---~---~~~~~~~~i~~~~v~f~y~~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 400 (592)
T PRK10790 327 QQYGN---D---DRPLQSGRIDIDNVSFAYRDDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRL 400 (592)
T ss_pred ccCCC---C---ccCCCCCeEEEEEEEEEeCCCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEE
Confidence 43211 1 112345689999999999643 334567999999999999999999999999999
Q ss_pred cCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc-----------
Q 037346 994 DGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ----------- 1062 (1156)
Q Consensus 994 dG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~----------- 1062 (1156)
||.|+++++.+.+|++|+||||||++|+||||+||.++++.+|+++++|++++|+++++.++|+||||.
T Consensus 401 dg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGG 480 (592)
T PRK10790 401 DGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVG 480 (592)
T ss_pred CCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHH
Confidence 999999999999999999999999999999999999988888999999999999999999999999975
Q ss_pred -------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhH
Q 037346 1063 -------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTK 1135 (1156)
Q Consensus 1063 -------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~e 1135 (1156)
||||+++|+|||||||||+||++|++.|++.|++..++||+|+||||++++..||+|+||++|+++|.|+|+|
T Consensus 481 qrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~ 560 (592)
T PRK10790 481 QKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQ 560 (592)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 8999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HhcCCCChHHHHHHHHhcc
Q 037346 1136 LLENKSSSFAQLVAEYTSS 1154 (1156)
Q Consensus 1136 Ll~~~~g~f~~l~~~~~~~ 1154 (1156)
|+++ ++.|++|++.+..+
T Consensus 561 L~~~-~~~y~~l~~~~~~~ 578 (592)
T PRK10790 561 LLAA-QGRYWQMYQLQLAG 578 (592)
T ss_pred HHhC-CCHHHHHHHHHhhh
Confidence 9986 69999999976644
No 42
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.2e-62 Score=615.50 Aligned_cols=428 Identities=21% Similarity=0.305 Sum_probs=348.0
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+....++.++++++++.|++||+++++|++++|++ .| ..+...+...+..++..++.+++.+++++.++|+
T Consensus 221 ~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~-----~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 294 (710)
T TIGR03796 221 LQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQ-----LN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPV 294 (710)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhh-----hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688889999999999999999999999999999998 44 3455555556666777777888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++.++++++++..++.+..++..+......+...+.+.|+++|+++||++|.|+.+.++|.+...+..+.......
T Consensus 295 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 374 (710)
T TIGR03796 295 LTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGV 374 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887776666666666666666666666677778899999999999999999999999999999888887777666655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HH---------------------HcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSITFAFSLAF---LI---------------------SVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~~~~---~~---------------------~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
...+.......+..+..++++.+ .+ .+.........++.....+++|+.++++.++
T Consensus 375 ~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~ 454 (710)
T TIGR03796 375 LTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPV 454 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 55555444443332222111111 00 0011111223567778889999999998776
Q ss_pred CCcccccC--C-CCCCCCCCCCeEEEEEEEEEEcCCC---------------CceeeCCCCCCHHHHHHHHhhcccCCCc
Q 037346 928 EPALVIEA--T-KPNNSRPSHGEVNIRHLQVRYAPNL---------------PLVLRGRTGSGKSTLIQTLFRIVESTAG 989 (1156)
Q Consensus 928 e~~~~~~~--~-~~~~~~p~~g~I~~~~Vsf~Y~~~~---------------~~vL~G~SGsGKSTL~~lL~rl~~p~~G 989 (1156)
|.+..... . .....++..|.|+|+||+|+|+++. .++++|+||||||||+++|+|+|+|++|
T Consensus 455 e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 534 (710)
T TIGR03796 455 DPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG 534 (710)
T ss_pred ccccccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 64321100 0 0011133467899999999997532 3456699999999999999999999999
Q ss_pred eEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc------
Q 037346 990 HILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ------ 1062 (1156)
Q Consensus 990 ~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~------ 1062 (1156)
+|.+||+|+++++.+++|++|+||||||++|+|||||||.+++ +.+|+++++|++.+++++++.++|+|+||.
T Consensus 535 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~ 614 (710)
T TIGR03796 535 EILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGA 614 (710)
T ss_pred EEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCC
Confidence 9999999999999999999999999999999999999999875 478999999999999999999999999975
Q ss_pred ------------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeee
Q 037346 1063 ------------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEY 1130 (1156)
Q Consensus 1063 ------------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~ 1130 (1156)
||||+++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++.+||||+|||+|+|+|.
T Consensus 615 ~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~ 692 (710)
T TIGR03796 615 NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQR 692 (710)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEe
Confidence 8999999999999999999999999999999987 48999999999999999999999999999999
Q ss_pred cChhHHhcCCCChHHHHH
Q 037346 1131 DSPTKLLENKSSSFAQLV 1148 (1156)
Q Consensus 1131 G~~~eLl~~~~g~f~~l~ 1148 (1156)
|+|+||+++ +|.|++|+
T Consensus 693 G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 693 GTHEELWAV-GGAYARLI 709 (710)
T ss_pred cCHHHHHHc-CCcHHHHh
Confidence 999999975 78999987
No 43
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.7e-61 Score=594.72 Aligned_cols=428 Identities=21% Similarity=0.289 Sum_probs=347.0
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.++..++|.+++++++++|+.||++.++|++++|++ .|+..++..+...+..++..++.+++.+++++.++|+
T Consensus 87 ~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~-----~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (574)
T PRK11160 87 ATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLV-----ADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLT 161 (574)
T ss_pred HHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999 7777777777777778888888888888999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHH
Q 037346 792 VLIVFVPVIATF-IWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIA 870 (1156)
Q Consensus 792 l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 870 (1156)
++++++.++++. ..+..++.+..+...+...+..+.+.+.+.|.++|+++||+|+.|+++.+++.+..++..+......
T Consensus 162 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 241 (574)
T PRK11160 162 LALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQA 241 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 987654443332 2333445555566666667778889999999999999999999999999999999888877776665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------cCCCccchHHHHHHHhHHHHHHHHhhcCC
Q 037346 871 GAMEWLRFCIDMLSSITFAFSLAFLIS------------------------VPNGIIHPYKNLERKIISVERILQCACIP 926 (1156)
Q Consensus 871 ~~~~~~~~~l~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~ 926 (1156)
....+......++..+..++++.+... +..........+.....+.+|+.++.+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~ 321 (574)
T PRK11160 242 NLTGLSQALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQK 321 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 555444444333322211111100000 00011112245667788999999998876
Q ss_pred CCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCC---------------CceeeCCCCCCHHHHHHHHhhcccCCCceE
Q 037346 927 SEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNL---------------PLVLRGRTGSGKSTLIQTLFRIVESTAGHI 991 (1156)
Q Consensus 927 ~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~---------------~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I 991 (1156)
++.... ... ...+..+.|+|+||+|+|+++. .++|+|+||||||||+++|+|+|+|++|+|
T Consensus 322 ~~~~~~--~~~--~~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I 397 (574)
T PRK11160 322 PEVTFP--TTS--TAAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEI 397 (574)
T ss_pred CCCCCC--ccc--CCCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 553211 000 1113357899999999996432 245669999999999999999999999999
Q ss_pred EEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc--------
Q 037346 992 LIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------- 1062 (1156)
Q Consensus 992 ~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~-------- 1062 (1156)
++||+|+++++.+++|++|++|||||+||+|||+|||.+++ +.+|+++++|++.+++++++.+ |+||||.
T Consensus 398 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~L 476 (574)
T PRK11160 398 LLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQL 476 (574)
T ss_pred EECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCC
Confidence 99999999999999999999999999999999999999875 4689999999999999999999 9999985
Q ss_pred ----------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecC
Q 037346 1063 ----------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1063 ----------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~ 1132 (1156)
|||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+
T Consensus 477 SgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~ 556 (574)
T PRK11160 477 SGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGT 556 (574)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCC
Confidence 8999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhHHhcCCCChHHHHHHH
Q 037346 1133 PTKLLENKSSSFAQLVAE 1150 (1156)
Q Consensus 1133 ~~eLl~~~~g~f~~l~~~ 1150 (1156)
|+||+++ +|.|++|++.
T Consensus 557 ~~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 557 HQELLAQ-QGRYYQLKQR 573 (574)
T ss_pred HHHHHhc-CcHHHHHHhh
Confidence 9999975 7999999863
No 44
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-61 Score=554.02 Aligned_cols=430 Identities=21% Similarity=0.313 Sum_probs=350.2
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
++.++...+|.++++++.+.+..|-+..|+|++.+.+++. ++.++..+...+...+.+++..+.+++.+++.+|.
T Consensus 67 aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~eg-----ve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~ 141 (559)
T COG4988 67 AAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEG-----IEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWA 141 (559)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 4556677889999999999999999999999999999944 44445555566777778888888888888899998
Q ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHH
Q 037346 792 VLI---VFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFH 868 (1156)
Q Consensus 792 l~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~ 868 (1156)
.++ +++|++++++++.. ...+...+.+-.+...+.++|.|.++|+.|+|+|++.+...++..+...+..+..+.
T Consensus 142 aalIllit~PlIPlfMilvg---~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~ 218 (559)
T COG4988 142 AALILLITAPLIPLFMILVG---LAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMS 218 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 654 45677766655432 233444445556677899999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCC-Cccch-----------------------HHHHHHHhHHHHHHHHhh
Q 037346 869 IAGAMEWLRFCIDMLSSITFAFSLAFLI-SVPN-GIIHP-----------------------YKNLERKIISVERILQCA 923 (1156)
Q Consensus 869 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~-~~~~~-----------------------~~~~~~~~~s~~Ri~~~~ 923 (1156)
.......-+..++++..+.++++++++. .+.. |.++. +........+.+.+..+.
T Consensus 219 vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l 298 (559)
T COG4988 219 VLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLL 298 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHh
Confidence 7777777777788877766655444321 1111 11111 133344466788888888
Q ss_pred cCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCC--------------CceeeCCCCCCHHHHHHHHhhcccCCCc
Q 037346 924 CIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNL--------------PLVLRGRTGSGKSTLIQTLFRIVESTAG 989 (1156)
Q Consensus 924 ~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~--------------~~vL~G~SGsGKSTL~~lL~rl~~p~~G 989 (1156)
+.|.+.....+ .....|....++.++|++|+|+.+. ..+|+|+||||||||+++|+|+.+|++|
T Consensus 299 ~~~~~~~~~~~--~~~~~~~~~~ei~~~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G 376 (559)
T COG4988 299 ESPVATPGSGE--KAEVANEPPIEISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQG 376 (559)
T ss_pred cCCCCCCCCcc--ccccccCCCceeeecceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCc
Confidence 76665432111 1112232234556669999997653 3467799999999999999999999999
Q ss_pred eEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc------
Q 037346 990 HILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ------ 1062 (1156)
Q Consensus 990 ~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~------ 1062 (1156)
+|.+||+|+++++.++||+++++|||+|+||+|||||||.++++ .+||||++|++++++.+++.. |+|+|+.
T Consensus 377 ~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~ 455 (559)
T COG4988 377 EIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGA 455 (559)
T ss_pred eEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCC
Confidence 99999999999999999999999999999999999999998876 679999999999999999999 9999965
Q ss_pred ------------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeee
Q 037346 1063 ------------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEY 1130 (1156)
Q Consensus 1063 ------------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~ 1130 (1156)
||||+++++++|||||||+||.|||+.|++.|.++++++|||+||||++.+.++|+|+|||+|+++|.
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~ 535 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQ 535 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceecc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhcCCCChHHHHHHHHhc
Q 037346 1131 DSPTKLLENKSSSFAQLVAEYTS 1153 (1156)
Q Consensus 1131 G~~~eLl~~~~g~f~~l~~~~~~ 1153 (1156)
|+|++|.++ +|.|++|+++++.
T Consensus 536 g~~~~L~~~-~~~y~~l~~~q~~ 557 (559)
T COG4988 536 GTHEELSEK-QGLYANLLKQQEG 557 (559)
T ss_pred CCHHHHhhc-CcHHHHHHHHHhc
Confidence 999999975 7999999998764
No 45
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.3e-60 Score=579.81 Aligned_cols=470 Identities=23% Similarity=0.283 Sum_probs=355.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccc----chhhH-H-----HHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 80 WQEILFIAILALLYTLATYVGPYLIDNFVQYLN-GRQAFE----YEGYV-L-----CLSERHWFFQVQQFGIRFRATLFA 148 (1156)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~-~~~~~~----~~g~~-l-----~~~~~~~~~~~~~~~~~~r~~l~~ 148 (1156)
|+.++..+++.++..++..+.|+++++++|.+. +..... ..+++ + .++.....+...+.+.++...++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556777888899999999999999999999873 322211 11111 1 122222334556778888899999
Q ss_pred HHHHHHhcCCccccCCCCHHHHHHHHHHHHHH--------------H-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 149 MIYNKGLTLSGQAKQGNTSGEIINLIAVDAER--------------A-------LLILYKKLGLASIATLLATAIVMLAN 207 (1156)
Q Consensus 149 ~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~--------------~-------~~ll~~~lg~~~l~~~~~~~~~~~~~ 207 (1156)
.+|+|.++++...+++.++|++++++++|++. . +++++..-.+.+++.++.+++...+.
T Consensus 82 ~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~ 161 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFM 161 (529)
T ss_pred HHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999889999999999999999987 0 00000000011111111111122222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH------HHHHHHHH---HHHHHHHHHHHHHHHHHH--
Q 037346 208 FPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK------KNETAWLK---KSVYTEAMISFFCWGAPT-- 276 (1156)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r------~~e~~~~~---~~~~~~~~~~~~~~~~~~-- 276 (1156)
..+.+...+..++.++..++..+.+.|.++|+++||.|++|.+ +...+..+ +..........+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (529)
T TIGR02857 162 ILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLS 241 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666777778888889999999999999999999811 11001111 011111111111111111
Q ss_pred HHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCc
Q 037346 277 FVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSDT 356 (1156)
Q Consensus 277 ~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~~ 356 (1156)
.+..+.++.+.+..+.+|.|.+++++.+...+..|+..+...+..+.+++++++|+.++++.++..... ...+ ....+
T Consensus 242 ~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~-~~~~-~~~~~ 319 (529)
T TIGR02857 242 VALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK-APVT-AAPAP 319 (529)
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-cCCC-CCCCC
Confidence 111223444555577899999999999999999999999999999999999999999999854322111 1111 11224
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.|+++|++|+|+.. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 320 ~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i 398 (529)
T TIGR02857 320 SLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQI 398 (529)
T ss_pred eEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhhe
Confidence 69999999999743 357999999999999999999999999999999999999999999999984 7
Q ss_pred EEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 424 AYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 424 ~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
+||+|+|++|++||+|||.++.+ .++++..++++.+++.++++.+|+|++|.+|++|.+||||||||++||||++++|+
T Consensus 399 ~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ 478 (529)
T TIGR02857 399 AWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAP 478 (529)
T ss_pred EEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999864 67889999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEE
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVI 552 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l 552 (1156)
++|||||||+||+++++.+++.+.. .+++|+|+||||++.++.||+|++|
T Consensus 479 ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 479 LLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred EEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999887755 4789999999999999999999985
No 46
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-62 Score=601.45 Aligned_cols=482 Identities=23% Similarity=0.325 Sum_probs=345.3
Q ss_pred ccEEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------
Q 037346 356 TAIEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------- 421 (1156)
..++++|+++.|+... +.++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 4699999999996322 34799999999999999999999999999999999999999999998765
Q ss_pred --------------eEEEEecCC--cCCC-ccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCcccc
Q 037346 422 --------------TKAYVAQSP--WIQS-GKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTII 476 (1156)
Q Consensus 422 --------------~~~~v~Q~~--~~~~-~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v 476 (1156)
.++||+|+| .++. .||.||+.++.. .+ .++..++++.++|.+. ....
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~~~~ 162 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------QTIL 162 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------hhHH
Confidence 379999998 3544 699999987521 22 2355566777777421 0112
Q ss_pred ccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEE
Q 037346 477 GERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVI 552 (1156)
Q Consensus 477 ~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l 552 (1156)
.....+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.+.. ..|+|+|+|||+++.+. .||+|++|
T Consensus 163 ~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl 242 (623)
T PRK10261 163 SRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVM 242 (623)
T ss_pred hCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEe
Confidence 345678999999999999999999999999999999999999988876543 23899999999999875 59999999
Q ss_pred eCCeEEEccChHHHHhcCc-chH-HHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCccccc
Q 037346 553 KDGKITQAGKYSDILNSGT-DFM-ELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAA 630 (1156)
Q Consensus 553 ~~G~i~~~g~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (1156)
++|++++.|+++++..... .+. .+.... +.... . .. ..
T Consensus 243 ~~G~i~~~g~~~~~~~~~~~~~~~~l~~~~-------------~~~~~---~------------------~~------~~ 282 (623)
T PRK10261 243 YQGEAVETGSVEQIFHAPQHPYTRALLAAV-------------PQLGA---M------------------KG------LD 282 (623)
T ss_pred eCCeecccCCHHHhhcCCCChhhhhhhhcc-------------Ccccc---c------------------cc------cc
Confidence 9999999999988764321 111 000000 00000 0 00 00
Q ss_pred CccCcchhHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHH
Q 037346 631 LPKGQLVQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYV 710 (1156)
Q Consensus 631 ~~~~~~~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1156)
.+ ......+. .. ...
T Consensus 283 ~~-~~~~~~~~-~~-----------------------------------------------------~~~---------- 297 (623)
T PRK10261 283 YP-RRFPLISL-EH-----------------------------------------------------PAK---------- 297 (623)
T ss_pred CC-cccccccc-cc-----------------------------------------------------ccc----------
Confidence 00 00000000 00 000
Q ss_pred HHHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 711 GAGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAW 790 (1156)
Q Consensus 711 ~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1156)
..|..+....+.++.
T Consensus 298 -------------------~~~~~~~~~~~~~~~---------------------------------------------- 312 (623)
T PRK10261 298 -------------------QEPPIEQDTVVDGEP---------------------------------------------- 312 (623)
T ss_pred -------------------cCcccccccccCCCc----------------------------------------------
Confidence 000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHH
Q 037346 791 QVLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIA 870 (1156)
Q Consensus 791 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 870 (1156)
T Consensus 313 -------------------------------------------------------------------------------- 312 (623)
T PRK10261 313 -------------------------------------------------------------------------------- 312 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCC-CC-CCCeE
Q 037346 871 GAMEWLRFCIDMLSSITFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNS-RP-SHGEV 948 (1156)
Q Consensus 871 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~-~p-~~g~I 948 (1156)
+.++.++ .......... +. ..+.-
T Consensus 313 ------------------------------------------------~L~~~~l------~~~y~~~~~~~~~~~~~~~ 338 (623)
T PRK10261 313 ------------------------------------------------ILQVRNL------VTRFPLRSGLLNRVTREVH 338 (623)
T ss_pred ------------------------------------------------eEEEeee------EEEEcCCCccccccCCceE
Confidence 0000000 0000000000 00 01124
Q ss_pred EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChH---HHhhcCeeeccccc--ccc-c
Q 037346 949 NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLH---DLRTRLSIIPQDPT--MFE-G 1022 (1156)
Q Consensus 949 ~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~LR~~i~~VpQdp~--LF~-g 1022 (1156)
.++||||...+++.++|.|+||||||||+++|+|+.+|++|+|.++|.++...+.. .+|++|+||||+|. ++. -
T Consensus 339 ~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~ 418 (623)
T PRK10261 339 AVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQ 418 (623)
T ss_pred EEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCC
Confidence 79999999999999999999999999999999999999999999999999887643 45778999999983 665 5
Q ss_pred cchhccCCC----CCCC----HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHH
Q 037346 1023 TTRSNLDPL----EEHA----DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTAT 1086 (1156)
Q Consensus 1023 TIr~Nl~~~----~~~~----deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~t 1086 (1156)
|+.+|+... +... ++++.++|+.+++. +.....|..|..+ ||||+.+|+|||||||||+||..+
T Consensus 419 tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~ 498 (623)
T PRK10261 419 TVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSI 498 (623)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 999998531 1111 25678999999996 5667777777655 899999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHHH-HHH
Q 037346 1087 DNQIQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFAQ-LVA 1149 (1156)
Q Consensus 1087 e~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~-l~~ 1149 (1156)
.+.|.+.|+++.+ +.|||+|||+++.+.. ||||+||++|+|+|.|++++++.++...|.+ ++.
T Consensus 499 ~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 499 RGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 9999999988643 7899999999998875 9999999999999999999999766655654 444
No 47
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-60 Score=531.91 Aligned_cols=483 Identities=23% Similarity=0.315 Sum_probs=365.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccc---------chhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 89 LALLYTLATYVGPYLIDNFVQYLNGRQAFE---------YEGYVL-----CLSERHWFFQVQQFGIRFRATLFAMIYNKG 154 (1156)
Q Consensus 89 ~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~---------~~g~~l-----~~~~~~~~~~~~~~~~~~r~~l~~~i~~k~ 154 (1156)
+.+..-++....|++++..++.+...+..+ ..+|++ .+..-.-.+....+..++-......+|++.
T Consensus 38 ~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~ 117 (591)
T KOG0057|consen 38 LLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHL 117 (591)
T ss_pred HHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333345677788999999999885211111 122322 111111123345666777788888999999
Q ss_pred hcCCccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 037346 155 LTLSGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLASIATLL-ATAIVMLANFPLGR 212 (1156)
Q Consensus 155 l~l~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~l~~~~-~~~~~~~~~~~~~~ 212 (1156)
+.++...+.+..+|++.+.|..-... +...+++..|.+.....+ .+.....++..+..
T Consensus 118 ~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~ 197 (591)
T KOG0057|consen 118 MSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTR 197 (591)
T ss_pred HhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehh
Confidence 99999999999999988777543332 112344555543332221 11222222334456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHHHHHHH--HHH--HHHHHHHHHHHHHHHHHHH
Q 037346 213 LREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKKNE-----TAWLKKSV--YTE--AMISFFCWGAPTFVSVVTF 283 (1156)
Q Consensus 213 ~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~~e-----~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~f 283 (1156)
+..++++++.++.++....+-+.|.|-.+||.|+-|.++.+ ++...... +.. ++..+. .-..|....++
T Consensus 198 ~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfg--Q~~iFsv~~~~ 275 (591)
T KOG0057|consen 198 WRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFG--QKAIFSVALTF 275 (591)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHH--HHHHHHHHHHH
Confidence 67788999999999999999999999999999999944332 22222111 111 111111 11112122222
Q ss_pred HHHH----HhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCccEE
Q 037346 284 GSCI----LLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSDTAIE 359 (1156)
Q Consensus 284 ~~~~----~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~~~i~ 359 (1156)
..++ ...+.+|.+...-..+++.++..|+..+...+..+.++..-++-.....+..+.... ...+....++.|+
T Consensus 276 im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~--~~~~i~~~~~~I~ 353 (591)
T KOG0057|consen 276 IMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQE--AALPIELFGGSIE 353 (591)
T ss_pred HHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhh--ccCCcccCCCcEE
Confidence 2222 345679999999999999999999999999999999988877776655443221111 0112223445699
Q ss_pred EeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EEEE
Q 037346 360 IIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KAYV 426 (1156)
Q Consensus 360 ~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~~v 426 (1156)
|+||+|+|+ +++++|+++||+|++||.+||+|+|||||||++++|+++++ .+|+|++||. ||||
T Consensus 354 F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~V 430 (591)
T KOG0057|consen 354 FDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVV 430 (591)
T ss_pred EEeeEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEe
Confidence 999999997 45679999999999999999999999999999999999999 9999999994 7999
Q ss_pred ecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeee
Q 037346 427 AQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFL 505 (1156)
Q Consensus 427 ~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ill 505 (1156)
||+..||++||.+||.+|.+ ..+++..++++..++++-+.++|+|++|.|||+|..|||||||||+||||+++||+|++
T Consensus 431 PQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 431 PQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred CCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEE
Confidence 99999999999999999986 56788888899999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHH
Q 037346 506 LDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVG 578 (1156)
Q Consensus 506 lDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 578 (1156)
+|||||+||.++++.+++.+.. ..+||+|+|.||+++++.||+|+++++|++.+.|+|+|++...+.|.+++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~ 584 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWT 584 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhc
Confidence 9999999999999999998766 789999999999999999999999999999999999999997666777654
No 48
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.6e-60 Score=590.76 Aligned_cols=431 Identities=21% Similarity=0.324 Sum_probs=353.8
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+....++.++++++++.|..+|++.+.|++++|++ .|+..+...+...+..++..++.+++.+++++.++|+
T Consensus 92 ~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~-----~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (582)
T PRK11176 92 VSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRIT-----YDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQ 166 (582)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577788999999999999999999999999999999 7777777666666777888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++..+++..++..++.+..++..+......+...+++.|.++|+++||+|+.++.+.+++.+..+...+...+...
T Consensus 167 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T PRK11176 167 LSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVS 246 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776666666556666666666666666667788899999999999999999999999999999999988887777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHcCCC-----------------------ccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSITFAFSLAF-LISVPNG-----------------------IIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~-----------------------~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
...+......++..+...+++.+ ......+ .......+.....+.+|+.++.+.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~ 326 (582)
T PRK11176 247 ASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQ 326 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 65555554444433222111111 0000111 11122566777888999999887665
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCC---------------CceeeCCCCCCHHHHHHHHhhcccCCCceEE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNL---------------PLVLRGRTGSGKSTLIQTLFRIVESTAGHIL 992 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~---------------~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~ 992 (1156)
+.+.. . ....+..+.|+|+||+|+|+++. .++|+|+||||||||+++|+|+|+|++|+|+
T Consensus 327 ~~~~~---~--~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~ 401 (582)
T PRK11176 327 EKDEG---K--RVIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEIL 401 (582)
T ss_pred cCCCC---C--cCCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEE
Confidence 53211 1 11123456799999999996532 2456799999999999999999999999999
Q ss_pred EcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC--CCCHHHHHHHHHHcCCChHHHhhcCCcccc--------
Q 037346 993 IDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE--EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------- 1062 (1156)
Q Consensus 993 idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~--~~~deei~~al~~~~l~~~i~~lp~gl~s~-------- 1062 (1156)
+||+|+++++.+++|++|+||||||++|+|||||||.+++ +++|++++++++.+++++++.++|+|+||.
T Consensus 402 i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~L 481 (582)
T PRK11176 402 LDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLL 481 (582)
T ss_pred ECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcC
Confidence 9999999999999999999999999999999999999864 368999999999999999999999999975
Q ss_pred ----------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecC
Q 037346 1063 ----------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1063 ----------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~ 1132 (1156)
||||+++|+|||||||||+||++||+.|.+.|.+..+++|+|+||||++++..||+|++|++|+|+|.|+
T Consensus 482 SGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~ 561 (582)
T PRK11176 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGT 561 (582)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCC
Confidence 8999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhHHhcCCCChHHHHHHHHhc
Q 037346 1133 PTKLLENKSSSFAQLVAEYTS 1153 (1156)
Q Consensus 1133 ~~eLl~~~~g~f~~l~~~~~~ 1153 (1156)
|++|+++ ++.|++|++++.+
T Consensus 562 ~~~l~~~-~~~y~~l~~~~~~ 581 (582)
T PRK11176 562 HAELLAQ-NGVYAQLHKMQFG 581 (582)
T ss_pred HHHHHhC-CChHHHHHHHHhc
Confidence 9999985 6899999986643
No 49
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-59 Score=525.57 Aligned_cols=502 Identities=23% Similarity=0.306 Sum_probs=360.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC--cccc-------hhhHH--HHHHHHHHHHHHHH
Q 037346 71 LAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLN-GRQ--AFEY-------EGYVL--CLSERHWFFQVQQF 138 (1156)
Q Consensus 71 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~-~~~--~~~~-------~g~~l--~~~~~~~~~~~~~~ 138 (1156)
+++.+++ .|+.+++++++.++..+....-=.+-+++|..-. .+. .+.. .++.+ +...+.-...+...
T Consensus 7 ~i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~A 85 (573)
T COG4987 7 YLRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDA 85 (573)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 3443444 6667777777766666555554445555554321 111 0000 00111 11111112233445
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHH
Q 037346 139 GIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER----------------------ALLILYKKLGLASIAT 196 (1156)
Q Consensus 139 ~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~----------------------~~~ll~~~lg~~~l~~ 196 (1156)
..++-+.++-.+|+|....++.......+|+++|++..|++. .+.+-+..++.+.+.+
T Consensus 86 tfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~ 165 (573)
T COG4987 86 TFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLG 165 (573)
T ss_pred HHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 678889999999999999998888889999999999999998 0111133444445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH------HHHHHHHHHHHHHHHHH---HH
Q 037346 197 LLATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE------LKKNETAWLKKSVYTEA---MI 267 (1156)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e------~r~~e~~~~~~~~~~~~---~~ 267 (1156)
+..+++++++.....+...+..++....+..--+...+.+.|..-.++||.+ ....|..+.+....... +.
T Consensus 166 ~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~ 245 (573)
T COG4987 166 LILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLS 245 (573)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444455555666666666666666677889999999999999988 33344444332222111 11
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHhCCCcc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 037346 268 SFFCWGAPT---FVSVVTFGSCILLGIPLE-SGMILSALTTFKILQEPIYY-LPESISMMIQAKVPLDRIASFLCLEGLQ 342 (1156)
Q Consensus 268 ~~~~~~~~~---~~~~~~f~~~~~~~~~lt-~~~~ft~l~~~~~l~~pl~~-l~~~~~~~~~a~~s~~Ri~~fl~~~~~~ 342 (1156)
.++..+... +...+|++.-.-.|+ .+ +..+...+..|..+ .++.- .|.++....+...|.+|+.+.++.++..
T Consensus 246 ~a~~~l~~g~~v~~~l~w~a~~~~~G~-~~~~~aa~~ll~~f~~~-eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~ 323 (573)
T COG4987 246 DAILLLIAGLLVIGLLLWMAAQVGAGA-LAQPGAALALLVIFAAL-EAFEPLAPGAFQHLGQVIASARRLNDILDQKPEV 323 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcCCC-cchhHHHHHHHHHHHHH-HHHhhhcchhHHHhhHHHHHHHHHhhhccCCccc
Confidence 111111111 111222222222232 33 33333333323222 33322 2366788889999999999999886543
Q ss_pred ccccccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-
Q 037346 343 TDVLEKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG- 421 (1156)
Q Consensus 343 ~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g- 421 (1156)
....+..+. .+..++++|++|+|+.+ +.++|+|+||++++||.+||+|+||||||||+++|.|.++|++|+|.++|
T Consensus 324 ~~~~~~~~~--~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~ 400 (573)
T COG4987 324 TFPDEQTAT--TGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGV 400 (573)
T ss_pred CCCccccCC--ccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCc
Confidence 322111111 11279999999999853 45899999999999999999999999999999999999999999999998
Q ss_pred ------------eEEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 ------------TKAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 ------------~~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.+++++|.+.+|++|+|||+.++++ .++|...+++++++|++.++..|+|++|.+||.|..||||||
T Consensus 401 ~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~ 480 (573)
T COG4987 401 EIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGER 480 (573)
T ss_pred ChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHH
Confidence 3688999999999999999999876 578999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDIL 567 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 567 (1156)
||++|||+|++|++++||||||.+||+.|++++++.+.. .+|||+|+|||++..++.||+|++|++|+++++|+|.+++
T Consensus 481 rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll 560 (573)
T COG4987 481 RRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELL 560 (573)
T ss_pred HHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhh
Confidence 999999999999999999999999999999999988765 6899999999999999999999999999999999999999
Q ss_pred hcCcchHHHHH
Q 037346 568 NSGTDFMELVG 578 (1156)
Q Consensus 568 ~~~~~~~~~~~ 578 (1156)
.+++.|.++++
T Consensus 561 ~~~g~~~~l~q 571 (573)
T COG4987 561 ANNGRYKRLYQ 571 (573)
T ss_pred ccccHHHHHhc
Confidence 98887877653
No 50
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.7e-60 Score=600.34 Aligned_cols=418 Identities=22% Similarity=0.297 Sum_probs=337.0
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+...+++.++++|++++|+.| +++++|++++|+. |+..+...+...+...+..++.+++.+++++.++|+
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~~------d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 286 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQLR------EFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGP 286 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHHH------HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 456788899999999999999998 7889999999983 455555555555555555666666777778888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++..+++++.+..++.+..++..+...+..+...+.+.|+++|+++||+|+.|+.+.++|.+..++..+..++...
T Consensus 287 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 366 (694)
T TIGR03375 287 LVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRF 366 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776666666666666666666777777777888899999999999999999999999999999998888777766655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHH---------------------HcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSITFAFSLA---FLI---------------------SVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~~~---~~~---------------------~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
...+.......+..+..++++. ..+ .+.........++.....+++|+.++.+.++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~ 446 (694)
T TIGR03375 367 LSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPV 446 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 5544443333322221111111 000 0111112223577888899999999998776
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcCC---------------CCceeeCCCCCCHHHHHHHHhhcccCCCceEE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAPN---------------LPLVLRGRTGSGKSTLIQTLFRIVESTAGHIL 992 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~---------------~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~ 992 (1156)
|.+.. .......+..|.|+|+||+|+|+++ +.++|+|+||||||||+++|+|+|+|++|+|.
T Consensus 447 e~~~~---~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 523 (694)
T TIGR03375 447 ERPEG---TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVL 523 (694)
T ss_pred CCCCC---CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 64321 1111112235789999999999643 23456799999999999999999999999999
Q ss_pred EcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc---------
Q 037346 993 IDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ--------- 1062 (1156)
Q Consensus 993 idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~--------- 1062 (1156)
+||+|+++++++++|++|++|||||++|+|||||||.++++ .+|+++++|++.+++++++.++|+||||.
T Consensus 524 idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LS 603 (694)
T TIGR03375 524 LDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLS 603 (694)
T ss_pred ECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCC
Confidence 99999999999999999999999999999999999998865 78999999999999999999999999975
Q ss_pred ---------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecCh
Q 037346 1063 ---------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSP 1133 (1156)
Q Consensus 1063 ---------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~ 1133 (1156)
||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+|+|.|+|
T Consensus 604 gGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~ 683 (694)
T TIGR03375 604 GGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPK 683 (694)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCH
Confidence 89999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred hHHhcC
Q 037346 1134 TKLLEN 1139 (1156)
Q Consensus 1134 ~eLl~~ 1139 (1156)
+||+++
T Consensus 684 ~eLl~~ 689 (694)
T TIGR03375 684 DQVLEA 689 (694)
T ss_pred HHHHHH
Confidence 999965
No 51
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2e-61 Score=589.53 Aligned_cols=449 Identities=20% Similarity=0.354 Sum_probs=334.0
Q ss_pred cEEEeeeEEEeCCC-CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC---------
Q 037346 357 AIEIIDGSFSWDFS-SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG--------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~-~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g--------- 421 (1156)
.++++|++++|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999631 125799999999999999999999999999999999999986 799999876
Q ss_pred --------eEEEEecCCc--CC-CccHHHHhhcCC----CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCC
Q 037346 422 --------TKAYVAQSPW--IQ-SGKIEENILFGK----EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGIN 482 (1156)
Q Consensus 422 --------~~~~v~Q~~~--~~-~~ti~eni~~~~----~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~ 482 (1156)
.++|++|+|. ++ ..|+++|+.++. ..+ .++.+++++.+++.+... ...+...+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~--------~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAK--------RLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH--------HHhhCCcc
Confidence 2799999985 33 358999986421 111 245566777777753211 11245578
Q ss_pred CCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEE
Q 037346 483 LSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKIT 558 (1156)
Q Consensus 483 LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~ 558 (1156)
|||||||||+|||||+.+|+++||||||++||+.+++++.+.+.. . .|+|+|+|||+++.+. .||+|++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999998876644 2 4899999999999886 59999999999999
Q ss_pred EccChHHHHhcCcc-hHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcch
Q 037346 559 QAGKYSDILNSGTD-FMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLV 637 (1156)
Q Consensus 559 ~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (1156)
+.|+++++...... +.+.
T Consensus 237 ~~g~~~~~~~~~~~~~~~~------------------------------------------------------------- 255 (529)
T PRK15134 237 EQNRAATLFSAPTHPYTQK------------------------------------------------------------- 255 (529)
T ss_pred EeCCHHHHhhCCCCHHHHH-------------------------------------------------------------
Confidence 99988766431100 0000
Q ss_pred hHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHH
Q 037346 638 QEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTA 717 (1156)
Q Consensus 638 ~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1156)
++... .
T Consensus 256 -----------------~~~~~--------------------------------------~------------------- 261 (529)
T PRK15134 256 -----------------LLNSE--------------------------------------P------------------- 261 (529)
T ss_pred -----------------HHHhC--------------------------------------c-------------------
Confidence 00000 0
Q ss_pred HHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 718 TQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFV 797 (1156)
Q Consensus 718 ~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~ 797 (1156)
..+ -....+.++.+ +. ..++.
T Consensus 262 ------------~~~--~~~~~~~~~~~--l~----~~~l~--------------------------------------- 282 (529)
T PRK15134 262 ------------SGD--PVPLPEPASPL--LD----VEQLQ--------------------------------------- 282 (529)
T ss_pred ------------ccc--ccccCCCCCCc--cc----ccCcE---------------------------------------
Confidence 000 00000000000 00 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 037346 798 PVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLR 877 (1156)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (1156)
T Consensus 283 -------------------------------------------------------------------------------- 282 (529)
T PRK15134 283 -------------------------------------------------------------------------------- 282 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEE
Q 037346 878 FCIDMLSSITFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRY 957 (1156)
Q Consensus 878 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y 957 (1156)
. ..+.. ...... +..+...|+|+||..
T Consensus 283 -------------------------~--------------------~~~~~------~~~~~~--~~~~~~il~~isl~i 309 (529)
T PRK15134 283 -------------------------V--------------------AFPIR------KGILKR--TVDHNVVVKNISFTL 309 (529)
T ss_pred -------------------------E--------------------EeecC------cccccc--ccccceeeecceeEE
Confidence 0 00000 000000 001234799999999
Q ss_pred cCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHH---HhhcCeeecccc--cccc-ccchhccCCC
Q 037346 958 APNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHD---LRTRLSIIPQDP--TMFE-GTTRSNLDPL 1031 (1156)
Q Consensus 958 ~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---LR~~i~~VpQdp--~LF~-gTIr~Nl~~~ 1031 (1156)
.+++.++|.|+||||||||+++|+|++ |++|+|.+||.++..++... +|++++||||++ .+|. .|+++|+.+.
T Consensus 310 ~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~ 388 (529)
T PRK15134 310 RPGETLGLVGESGSGKSTTGLALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEG 388 (529)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHH
Confidence 999999999999999999999999998 58999999999998776543 477899999998 3665 4999999642
Q ss_pred ---C--CCC----HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHH
Q 037346 1032 ---E--EHA----DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTL 1094 (1156)
Q Consensus 1032 ---~--~~~----deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l 1094 (1156)
. ... ++.+.++++..++. +.....|..|..+ ||||+.+|+||||||||++||+.+.+.+.+.|
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l 468 (529)
T PRK15134 389 LRVHQPTLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALL 468 (529)
T ss_pred HHhccccCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHH
Confidence 1 111 34678999999997 4566666666654 89999999999999999999999999999999
Q ss_pred HHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCC
Q 037346 1095 RQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKS 1141 (1156)
Q Consensus 1095 ~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~ 1141 (1156)
+++.+ ++|||+|||+++.+.. ||+|++|++|+|++.|++++++.++.
T Consensus 469 ~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 469 KSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQ 518 (529)
T ss_pred HHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCC
Confidence 98753 7899999999998865 99999999999999999999986543
No 52
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-61 Score=526.54 Aligned_cols=429 Identities=20% Similarity=0.342 Sum_probs=349.0
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVV-MSLVAW 790 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~ 790 (1156)
.+..+.+.+--+.|.|+.++.+.|.-++.+|-+...+. .-..-++..+.+.+...+..++-+....++ ...++|
T Consensus 9 v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ie-----rGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 9 VGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIE-----RGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhh-----cCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 45566677778889999999999999998887755554 333344444555566666555555444443 445788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHH
Q 037346 791 QVLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIA 870 (1156)
Q Consensus 791 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 870 (1156)
+.+++++..+++|.++........-..+|....+-+...+...+++-+-+|+|.||.|+++..+|.+.++.+.++..+..
T Consensus 84 ~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~ 163 (497)
T COG5265 84 WFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVH 163 (497)
T ss_pred HHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHH
Confidence 88888777777776665555555556677777788888999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---------------------HH---HcCCCccchHHHHHHHhHHHHHHHHhhcCC
Q 037346 871 GAMEWLRFCIDMLSSITFAFSLAF---------------------LI---SVPNGIIHPYKNLERKIISVERILQCACIP 926 (1156)
Q Consensus 871 ~~~~~~~~~l~~~~~~~~~~~~~~---------------------~~---~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~ 926 (1156)
.+..|+.+.-..+........... +. .+.+..-..+.++.+.....|++.+..+.+
T Consensus 164 ~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~ 243 (497)
T COG5265 164 VSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVE 243 (497)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccc
Confidence 888888766554443322211111 00 011111122367788888889999888766
Q ss_pred CCCcccccCCCCCCCCC-CCCeEEEEEEEEEEcCCCC--------------ceeeCCCCCCHHHHHHHHhhcccCCCceE
Q 037346 927 SEPALVIEATKPNNSRP-SHGEVNIRHLQVRYAPNLP--------------LVLRGRTGSGKSTLIQTLFRIVESTAGHI 991 (1156)
Q Consensus 927 ~e~~~~~~~~~~~~~~p-~~g~I~~~~Vsf~Y~~~~~--------------~vL~G~SGsGKSTL~~lL~rl~~p~~G~I 991 (1156)
.|.. +.+..++-|| ..|.|.|+||+|.|.|..| ++++|+||+||||+.++|+|||++++|.|
T Consensus 244 ~~v~---d~pda~~L~~~~~g~v~F~~V~F~y~~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I 320 (497)
T COG5265 244 AEVS---DAPDAPPLWPVRLGAVAFINVSFAYDPRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSI 320 (497)
T ss_pred hhhc---cCCCCccccccccceEEEEEEEeeccccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceE
Confidence 6543 2233345564 4588999999999976544 46779999999999999999999999999
Q ss_pred EEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc--------
Q 037346 992 LIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------- 1062 (1156)
Q Consensus 992 ~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~-------- 1062 (1156)
.|||.||+++..+.||+.||+||||.+||++|+..|+.++++ .+++|++.|++.+++++||+.+|+||+++
T Consensus 321 ~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglkl 400 (497)
T COG5265 321 TIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKL 400 (497)
T ss_pred EEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeec
Confidence 999999999999999999999999999999999999999875 57999999999999999999999999987
Q ss_pred ----------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecC
Q 037346 1063 ----------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1063 ----------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~ 1132 (1156)
||++||+|+||+||||||+||..||+.||.+|++..+++|.++|||||+||.+||.|+||++|+|+|.|+
T Consensus 401 Sggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~ 480 (497)
T COG5265 401 SGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGT 480 (497)
T ss_pred cCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhcCCCChHHHHHH
Q 037346 1133 PTKLLENKSSSFAQLVA 1149 (1156)
Q Consensus 1133 ~~eLl~~~~g~f~~l~~ 1149 (1156)
|+||+++ +|.|++||.
T Consensus 481 h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 481 HEELLAA-GGLYAEMWR 496 (497)
T ss_pred HHHHHHc-CChHHHHhc
Confidence 9999986 899999996
No 53
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=9e-59 Score=620.00 Aligned_cols=509 Identities=16% Similarity=0.150 Sum_probs=364.4
Q ss_pred cchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-CCc--ccchhhHH------HHHHHHHHHHHHH
Q 037346 69 LRLAKVLFFSAWQEI-LFIAILALLYTLATYVGPYLIDNFVQYLN-G-RQA--FEYEGYVL------CLSERHWFFQVQQ 137 (1156)
Q Consensus 69 ~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~p~ll~~~i~~~~-~-~~~--~~~~g~~l------~~~~~~~~~~~~~ 137 (1156)
.+.++.+++..++.. ++.+++.++..++....|+.++...+... . ... ..+.+++. .++.....+....
T Consensus 952 ~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~ 1031 (1522)
T TIGR00957 952 LSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSI 1031 (1522)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555666554332 23334445556677778888887665321 1 111 11122111 1111111223455
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH-------HH--------------HHHHHHHHHHHHHH
Q 037346 138 FGIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER-------AL--------------LILYKKLGLASIAT 196 (1156)
Q Consensus 138 ~~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~-------~~--------------~ll~~~lg~~~l~~ 196 (1156)
.+.+.-..+...+|++.++.+...+++.++|+++|++++|++. .+ ++++....+.+++.
T Consensus 1032 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~ 1111 (1522)
T TIGR00957 1032 GGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII 1111 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888889999999999999999999999999999999987 00 00011000111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH--HHHHHH---HHHHHHH----HHHH
Q 037346 197 LLATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK--KNETAW---LKKSVYT----EAMI 267 (1156)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r--~~e~~~---~~~~~~~----~~~~ 267 (1156)
++++++.+.+...+.+..+..++.....++...+...|.++|+++||.|++|.+ +.-.+. ..+..+. ..+.
T Consensus 1112 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1191 (1522)
T TIGR00957 1112 PPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWL 1191 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111111122222223333334445556889999999999999999922 111111 1111111 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccc-
Q 037346 268 SFFCWGAPTFVSVVTFGSCILL-GIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDV- 345 (1156)
Q Consensus 268 ~~~~~~~~~~~~~~~f~~~~~~-~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~- 345 (1156)
.........+ ..+..+.+.+. .+.+++|.+..++.+...+..|+..+...+..+..+.+|.+||.++++.++..+..
T Consensus 1192 ~~~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~ 1270 (1522)
T TIGR00957 1192 AVRLECVGNC-IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQI 1270 (1522)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 1111111111 12222333333 46799999999999999999999999999999999999999999999765432210
Q ss_pred cccCCCC--CCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-
Q 037346 346 LEKMPRG--NSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT- 422 (1156)
Q Consensus 346 ~~~~~~~--~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~- 422 (1156)
....++. +..+.|+|+|++|+|+.+ ..++|+|+||+|++||++||||++|||||||+++|+|+++|++|+|.+||.
T Consensus 1271 ~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1271 QETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLN 1349 (1522)
T ss_pred cCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEE
Confidence 0111111 234679999999999743 347999999999999999999999999999999999999999999999993
Q ss_pred ------------EEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 ------------KAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 ------------~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
++||||+|.+|+|||||||....++++++..++++.|++.+.+..+|+|++|.||++|.+||||||||
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQr 1429 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQL 1429 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHH
Confidence 69999999999999999998444688899999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
++|||||+++|+|||||||||+||+++++.|.+.+.. .+++|+|+|+||++.+..||+|++|++|+|++.|+|++++++
T Consensus 1430 l~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~ 1509 (1522)
T TIGR00957 1430 VCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ 1509 (1522)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999888776644 578999999999999999999999999999999999999988
Q ss_pred CcchHHHHHh
Q 037346 570 GTDFMELVGA 579 (1156)
Q Consensus 570 ~~~~~~~~~~ 579 (1156)
++.|.++++.
T Consensus 1510 ~~~f~~l~~~ 1519 (1522)
T TIGR00957 1510 RGIFYSMAKD 1519 (1522)
T ss_pred CCHHHHHHHH
Confidence 7888887654
No 54
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=8.7e-60 Score=593.34 Aligned_cols=429 Identities=20% Similarity=0.315 Sum_probs=345.4
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+....++.+++++++++|+.||+++++|++++|++ |...+...+...+..++..++.+++.++++++++|+
T Consensus 206 ~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl~------d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 279 (694)
T TIGR01846 206 LTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARVR------ELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPT 279 (694)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46688889999999999999999999999999999994 455555555444555555555556667788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++..++++..+..++.+..+...+...+..+...+.+.|+++|+++||++|.|+.+.++|.+..++..+..+....
T Consensus 280 l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 359 (694)
T TIGR01846 280 LTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTN 359 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776666555555555555555555555556677889999999999999999999999999999999888887777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HH---------------------HcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSITFAFSLAF---LI---------------------SVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~~~~---~~---------------------~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
...+......++..+..++.+.+ ++ .+.........+++....+++|+.++.+.++
T Consensus 360 ~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 439 (694)
T TIGR01846 360 LGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPT 439 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 65555554444332222211111 00 0011111222567788899999999998776
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCC---------------CceeeCCCCCCHHHHHHHHhhcccCCCceEE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNL---------------PLVLRGRTGSGKSTLIQTLFRIVESTAGHIL 992 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~---------------~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~ 992 (1156)
|.... .. .......|.|+|+||+|+|+++. .++|+|+||||||||+++|+|+|+|++|+|+
T Consensus 440 e~~~~---~~-~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~ 515 (694)
T TIGR01846 440 EPRSA---GL-AALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVL 515 (694)
T ss_pred CccCC---CC-CCCCCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 64321 10 01112357899999999996543 3456699999999999999999999999999
Q ss_pred EcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc---------
Q 037346 993 IDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ--------- 1062 (1156)
Q Consensus 993 idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~--------- 1062 (1156)
+||+|+++++.+++|+++++|||||++|+|||||||.+++ +.+++++++|++.+++++++.++|+||||.
T Consensus 516 idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LS 595 (694)
T TIGR01846 516 VDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLS 595 (694)
T ss_pred ECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCC
Confidence 9999999999999999999999999999999999999865 467999999999999999999999999975
Q ss_pred ---------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecCh
Q 037346 1063 ---------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSP 1133 (1156)
Q Consensus 1063 ---------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~ 1133 (1156)
||||+++|+|||||||||+||++||+.|.+.|++..+++|+|+||||++++..||+|+||++|+|+|.|+|
T Consensus 596 gGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~ 675 (694)
T TIGR01846 596 GGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRH 675 (694)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCH
Confidence 89999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hHHhcCCCChHHHHHHHH
Q 037346 1134 TKLLENKSSSFAQLVAEY 1151 (1156)
Q Consensus 1134 ~eLl~~~~g~f~~l~~~~ 1151 (1156)
++|+++ +|.|++|++++
T Consensus 676 ~~l~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 676 EELLAL-QGLYARLWQQQ 692 (694)
T ss_pred HHHHHc-CChHHHHHHhh
Confidence 999985 69999999864
No 55
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4e-61 Score=583.09 Aligned_cols=423 Identities=21% Similarity=0.367 Sum_probs=326.3
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------e
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------T 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------~ 422 (1156)
.++++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 589999999996 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCC-------CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKE-------MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~-------~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
++|++|++.++. .|++||+.++.. .+. ++..++++.+++.+.. .....+||||||||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qr 149 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSS-----------DKLVGELSIGEQQM 149 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCc-----------cCchhhCCHHHHHH
Confidence 799999987765 599999998632 121 2345566666664332 24456899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHH
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDIL 567 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 567 (1156)
++|||||+.+|++|||||||++||+.++..+.+.+.. .+|+|+|++||+++.+. .||+|++|++|+++..|+.+++.
T Consensus 150 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (501)
T PRK10762 150 VEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLT 229 (501)
T ss_pred HHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCC
Confidence 9999999999999999999999999999998876543 45789999999999886 59999999999998876543321
Q ss_pred hcCcchHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCcc
Q 037346 568 NSGTDFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGKV 647 (1156)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~ 647 (1156)
.. +.... ..
T Consensus 230 ~~-----~~~~~---~~--------------------------------------------------------------- 238 (501)
T PRK10762 230 ED-----SLIEM---MV--------------------------------------------------------------- 238 (501)
T ss_pred HH-----HHHHH---hc---------------------------------------------------------------
Confidence 00 00000 00
Q ss_pred cHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 037346 648 GFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNKMHVC 727 (1156)
Q Consensus 648 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 727 (1156)
+ .
T Consensus 239 -------------~-----------------------------~------------------------------------ 240 (501)
T PRK10762 239 -------------G-----------------------------R------------------------------------ 240 (501)
T ss_pred -------------C-----------------------------C------------------------------------
Confidence 0 0
Q ss_pred hccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 728 IFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQ 807 (1156)
Q Consensus 728 ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~ 807 (1156)
+. ... .|
T Consensus 241 -------------------~~------~~~------~~------------------------------------------ 247 (501)
T PRK10762 241 -------------------KL------EDQ------YP------------------------------------------ 247 (501)
T ss_pred -------------------Cc------ccc------cc------------------------------------------
Confidence 00 000 00
Q ss_pred HHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 808 QYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSIT 887 (1156)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 887 (1156)
T Consensus 248 -------------------------------------------------------------------------------- 247 (501)
T PRK10762 248 -------------------------------------------------------------------------------- 247 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCCceeeC
Q 037346 888 FAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLPLVLRG 967 (1156)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~~vL~G 967 (1156)
. .. ..+.++....+. .. .. .++|++|..++++.++|.|
T Consensus 248 ------------~--~~-------------------~~~~~~~l~~~~--l~------~~-~l~~vsl~i~~Ge~~~liG 285 (501)
T PRK10762 248 ------------R--LD-------------------KAPGEVRLKVDN--LS------GP-GVNDVSFTLRKGEILGVSG 285 (501)
T ss_pred ------------c--cc-------------------cCCCCcEEEEeC--cc------cC-CcccceEEEcCCcEEEEec
Confidence 0 00 000000000000 00 01 3899999999999999999
Q ss_pred CCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCCh-HHHhhcCeeecccc---ccc-cccchhccCCCC-----C----
Q 037346 968 RTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGL-HDLRTRLSIIPQDP---TMF-EGTTRSNLDPLE-----E---- 1033 (1156)
Q Consensus 968 ~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~-~~LR~~i~~VpQdp---~LF-~gTIr~Nl~~~~-----~---- 1033 (1156)
+||||||||+++|.|+++|++|+|.++|.++...+. +.+|++++||||+| .+| .-|+++|+.+.. .
T Consensus 286 ~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~ 365 (501)
T PRK10762 286 LMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGS 365 (501)
T ss_pred CCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccc
Confidence 999999999999999999999999999999987665 34678899999997 355 469999996421 0
Q ss_pred CC----HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc-CC
Q 037346 1034 HA----DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF-SD 1100 (1156)
Q Consensus 1034 ~~----deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~-~~ 1100 (1156)
.. ++++.++++.+++. +.....+..|..+ ||||+.+|+||||||||++||+.+.+.+.+.|+++. ++
T Consensus 366 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g 445 (501)
T PRK10762 366 LKHADEQQAVSDFIRLFNIKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEG 445 (501)
T ss_pred cCHHHHHHHHHHHHHhcCCCCCCccCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCC
Confidence 11 34578899999994 4555555555544 899999999999999999999999999999999874 47
Q ss_pred ceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHh
Q 037346 1101 CTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLL 1137 (1156)
Q Consensus 1101 ~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl 1137 (1156)
+|||+|||+++.+.. ||+|++|++|+|++.|+++++.
T Consensus 446 ~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 446 LSIILVSSEMPEVLGMSDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred CEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccccCC
Confidence 899999999998764 9999999999999999988764
No 56
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3e-61 Score=584.40 Aligned_cols=436 Identities=24% Similarity=0.372 Sum_probs=333.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.++++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 11 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYS---GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 599999999996 357999999999999999999999999999999999999999999999872
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCCCC---HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKEMD---RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
++|++|++.++. .|++||+.++.... +++..++++.+++.+.. .....+||||||||++|||||+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDL-----------DSSAGSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCccc-----------cCChhhCCHHHHHHHHHHHHHH
Confidence 789999998765 59999999875321 34556677777775433 2445689999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhcCcchHH
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNSGTDFME 575 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 575 (1156)
.+|++|||||||++||+.+.+++.+.+.. .+|+|+|++||+++.+. .||+|++|++|++++.|+++++....
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~----- 231 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD----- 231 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH-----
Confidence 99999999999999999999999876643 45899999999999886 59999999999999999887654210
Q ss_pred HHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCcccHHHHHHH
Q 037346 576 LVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGKVGFSVYWKY 655 (1156)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~~~~~~~~y 655 (1156)
........ . . .. . . . ... . +
T Consensus 232 ~~~~~~~~-----~--~---------~~-~---------------~---~---------------~~~--~-----~--- 251 (510)
T PRK15439 232 IIQAITPA-----A--R---------EK-S---------------L---S---------------ASQ--K-----L--- 251 (510)
T ss_pred HHHHHhCc-----c--c---------cc-c---------------c---c---------------ccc--c-----c---
Confidence 00000000 0 0 00 0 0 0 000 0 0
Q ss_pred HHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 037346 656 MTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNKMHVCIFRAPMYF 735 (1156)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~f 735 (1156)
+..
T Consensus 252 ----------------------------------------------------------------------------~~~- 254 (510)
T PRK15439 252 ----------------------------------------------------------------------------WLE- 254 (510)
T ss_pred ----------------------------------------------------------------------------ccc-
Confidence 000
Q ss_pred cccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 736 FDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYITSTR 815 (1156)
Q Consensus 736 f~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~ 815 (1156)
|.. .+
T Consensus 255 ~~~----------------~~----------------------------------------------------------- 259 (510)
T PRK15439 255 LPG----------------NR----------------------------------------------------------- 259 (510)
T ss_pred ccc----------------cc-----------------------------------------------------------
Confidence 000 00
Q ss_pred HHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 816 ELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSITFAFSLAFL 895 (1156)
Q Consensus 816 ~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 895 (1156)
.
T Consensus 260 ---------~---------------------------------------------------------------------- 260 (510)
T PRK15439 260 ---------R---------------------------------------------------------------------- 260 (510)
T ss_pred ---------c----------------------------------------------------------------------
Confidence 0
Q ss_pred HHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCCceeeCCCCCCHHH
Q 037346 896 ISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLPLVLRGRTGSGKST 975 (1156)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~~vL~G~SGsGKST 975 (1156)
.. -+.++....+. .. +. .++||+|..++++.++|.|+|||||||
T Consensus 261 ---~~------------------------~~~~~~l~~~~--l~------~~-~l~~isl~i~~Ge~~~l~G~NGsGKST 304 (510)
T PRK15439 261 ---QQ------------------------AAGAPVLTVED--LT------GE-GFRNISLEVRAGEILGLAGVVGAGRTE 304 (510)
T ss_pred ---cc------------------------CCCCceEEEeC--CC------CC-CccceeEEEcCCcEEEEECCCCCCHHH
Confidence 00 00000000000 00 01 389999999999999999999999999
Q ss_pred HHHHHhhcccCCCceEEEcCeeCCCCChHH-HhhcCeeecccc---ccccc-cchhccCCC-----C---CCC--HHHHH
Q 037346 976 LIQTLFRIVESTAGHILIDGKDISLIGLHD-LRTRLSIIPQDP---TMFEG-TTRSNLDPL-----E---EHA--DEQIW 1040 (1156)
Q Consensus 976 L~~lL~rl~~p~~G~I~idG~di~~i~~~~-LR~~i~~VpQdp---~LF~g-TIr~Nl~~~-----~---~~~--deei~ 1040 (1156)
|+++|.|+.+|++|+|.++|.++...+... +|++++||||++ .+|.. |+.+|+... . ... ++++.
T Consensus 305 Ll~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~ 384 (510)
T PRK15439 305 LAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLE 384 (510)
T ss_pred HHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHH
Confidence 999999999999999999999998877654 467899999996 36654 899998421 0 111 23577
Q ss_pred HHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc-CCceEEEeecCcc
Q 037346 1041 EALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF-SDCTVVTIAHRIT 1111 (1156)
Q Consensus 1041 ~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ 1111 (1156)
++++..++. +.....+..|..+ ||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|+|+++
T Consensus 385 ~~l~~~~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~ 464 (510)
T PRK15439 385 RYRRALNIKFNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE 464 (510)
T ss_pred HHHHHcCCCCCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH
Confidence 889999996 5565556666544 899999999999999999999999999999998864 4789999999999
Q ss_pred cccc-cCEEEEEeCcEEeeecChhHHhc
Q 037346 1112 SVLD-SAMVLLLNHGLIKEYDSPTKLLE 1138 (1156)
Q Consensus 1112 ti~~-~D~I~Vl~~G~IvE~G~~~eLl~ 1138 (1156)
.+.+ ||+|++|++|+|+..|+++++..
T Consensus 465 ~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 492 (510)
T PRK15439 465 EIEQMADRVLVMHQGEISGALTGAAINV 492 (510)
T ss_pred HHHHhCCEEEEEECCEEEEEEccccCCH
Confidence 9875 99999999999999999988764
No 57
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-61 Score=584.12 Aligned_cols=430 Identities=24% Similarity=0.355 Sum_probs=327.0
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC--CCcEEEEcCe------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK--ESGIIRLCGT------------ 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~--~~G~i~~~g~------------ 422 (1156)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.
T Consensus 5 ~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 589999999996 35799999999999999999999999999999999999996 8999999872
Q ss_pred --EEEEecCCcCCC-ccHHHHhhcCCC------CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 423 --KAYVAQSPWIQS-GKIEENILFGKE------MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 423 --~~~v~Q~~~~~~-~ti~eni~~~~~------~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
++|++|+|.++. .|++||+.++.. .+. ++.+++++..++.... .....+|||||||
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgGqkq 150 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINP-----------ATPVGNLGLGQQQ 150 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCc-----------ccchhhCCHHHHH
Confidence 799999997765 599999988642 121 2344556555553322 3455789999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
|++|||||+.+|+++||||||++||+..+..+.+.+.. .+|+|+|++||+++.+. .||+|++|++|+++..|+.+++
T Consensus 151 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 230 (506)
T PRK13549 151 LVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGM 230 (506)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccC
Confidence 99999999999999999999999999999998876643 45889999999999886 5999999999999987765432
Q ss_pred HhcCcchHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCc
Q 037346 567 LNSGTDFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGK 646 (1156)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~ 646 (1156)
... +.....
T Consensus 231 ~~~-----~~~~~~------------------------------------------------------------------ 239 (506)
T PRK13549 231 TED-----DIITMM------------------------------------------------------------------ 239 (506)
T ss_pred CHH-----HHHHHh------------------------------------------------------------------
Confidence 110 000000
Q ss_pred ccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037346 647 VGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNKMHV 726 (1156)
Q Consensus 647 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 726 (1156)
. +. .. ..
T Consensus 240 ---------~----~~----------------------------~~-----~~--------------------------- 246 (506)
T PRK13549 240 ---------V----GR----------------------------EL-----TA--------------------------- 246 (506)
T ss_pred ---------h----Cc----------------------------Cc-----cc---------------------------
Confidence 0 00 00 00
Q ss_pred HhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 727 CIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWY 806 (1156)
Q Consensus 727 ~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~ 806 (1156)
..|.. ..+.+
T Consensus 247 ---~~~~~---~~~~~---------------------------------------------------------------- 256 (506)
T PRK13549 247 ---LYPRE---PHTIG---------------------------------------------------------------- 256 (506)
T ss_pred ---ccccc---ccCCC----------------------------------------------------------------
Confidence 00000 00000
Q ss_pred HHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 037346 807 QQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSI 886 (1156)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 886 (1156)
T Consensus 257 -------------------------------------------------------------------------------- 256 (506)
T PRK13549 257 -------------------------------------------------------------------------------- 256 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCC-CCeEEEEEEEEEEcCCCCcee
Q 037346 887 TFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPS-HGEVNIRHLQVRYAPNLPLVL 965 (1156)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~-~g~I~~~~Vsf~Y~~~~~~vL 965 (1156)
++.. +.......++. .+...++||+|..++++.++|
T Consensus 257 -----------------------------------------~~~l--~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l 293 (506)
T PRK13549 257 -----------------------------------------EVIL--EVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGI 293 (506)
T ss_pred -----------------------------------------CceE--EEecCccccccccccccccceeeEEcCCcEEEE
Confidence 0000 00000011111 122368999999999999999
Q ss_pred eCCCCCCHHHHHHHHhhccc-CCCceEEEcCeeCCCCCh-HHHhhcCeeecccc---cccc-ccchhccCCCC-----C-
Q 037346 966 RGRTGSGKSTLIQTLFRIVE-STAGHILIDGKDISLIGL-HDLRTRLSIIPQDP---TMFE-GTTRSNLDPLE-----E- 1033 (1156)
Q Consensus 966 ~G~SGsGKSTL~~lL~rl~~-p~~G~I~idG~di~~i~~-~~LR~~i~~VpQdp---~LF~-gTIr~Nl~~~~-----~- 1033 (1156)
.|+||||||||+++|+|+++ |++|+|.++|.++...+. +.+|+.++||||++ .+|. -|+.+|+.... .
T Consensus 294 ~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 373 (506)
T PRK13549 294 AGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGG 373 (506)
T ss_pred eCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccC
Confidence 99999999999999999998 599999999999875543 45677899999997 3564 59999996421 1
Q ss_pred --CC----HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc-
Q 037346 1034 --HA----DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF- 1098 (1156)
Q Consensus 1034 --~~----deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~- 1098 (1156)
.+ .+++.++++.+++. +.....+..|..+ ||||+.+|+||||||||++||+.+.+.+.+.|+++.
T Consensus 374 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~ 453 (506)
T PRK13549 374 SRIDDAAELKTILESIQRLKVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQ 453 (506)
T ss_pred cccChHHHHHHHHHHHHhcCccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHH
Confidence 11 24578899999995 4555555555544 899999999999999999999999999999998764
Q ss_pred CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHh
Q 037346 1099 SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLL 1137 (1156)
Q Consensus 1099 ~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl 1137 (1156)
+++|||+|||+++.+.. ||+|++|++|+|+..|+++++.
T Consensus 454 ~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 454 QGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred CCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 47899999999998865 9999999999999999988764
No 58
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-61 Score=584.54 Aligned_cols=428 Identities=22% Similarity=0.337 Sum_probs=327.0
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------e
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------T 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------~ 422 (1156)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 5 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 589999999996 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCC----------CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKE----------MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~----------~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
++|++|++.++. .|++||+.++.. .+ .++..++++.+++.+.. .....+|||||
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgG~ 150 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDL-----------DEKVANLSISH 150 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCc-----------ccchhhCCHHH
Confidence 799999997765 599999987531 01 12345566666664322 34457899999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChH
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYS 564 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 564 (1156)
|||++|||||+.+|+++||||||++||+.++..+.+.+.. .+|+|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 151 ~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (510)
T PRK09700 151 KQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVS 230 (510)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchh
Confidence 9999999999999999999999999999999998876643 45899999999999986 59999999999999888766
Q ss_pred HHHhcCcchHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhc
Q 037346 565 DILNSGTDFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREK 644 (1156)
Q Consensus 565 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 644 (1156)
++... +..... . .. . .
T Consensus 231 ~~~~~-----~~~~~~---~-~~-----------------~---------------~----------------------- 246 (510)
T PRK09700 231 DVSND-----DIVRLM---V-GR-----------------E---------------L----------------------- 246 (510)
T ss_pred hCCHH-----HHHHHh---c-CC-----------------C---------------c-----------------------
Confidence 54210 000000 0 00 0 0
Q ss_pred CcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 037346 645 GKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNKM 724 (1156)
Q Consensus 645 g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 724 (1156)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 725 HVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFI 804 (1156)
Q Consensus 725 ~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~ 804 (1156)
..++. +.. +
T Consensus 247 --------------------~~~~~------~~~------~--------------------------------------- 255 (510)
T PRK09700 247 --------------------QNRFN------AMK------E--------------------------------------- 255 (510)
T ss_pred --------------------ccccc------ccc------c---------------------------------------
Confidence 00000 000 0
Q ss_pred HHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 037346 805 WYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLS 884 (1156)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 884 (1156)
.
T Consensus 256 --------------------~----------------------------------------------------------- 256 (510)
T PRK09700 256 --------------------N----------------------------------------------------------- 256 (510)
T ss_pred --------------------c-----------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCCce
Q 037346 885 SITFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLPLV 964 (1156)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~~v 964 (1156)
... ...++....+ ...... +. .++|+||..++++.++
T Consensus 257 --------------~~~-----------------------~~~~~~l~~~--~l~~~~---~~-~l~~isl~i~~Ge~~~ 293 (510)
T PRK09700 257 --------------VSN-----------------------LAHETVFEVR--NVTSRD---RK-KVRDISFSVCRGEILG 293 (510)
T ss_pred --------------ccc-----------------------CCCCcEEEEe--CccccC---CC-cccceeEEEcCCcEEE
Confidence 000 0000000000 000001 12 5899999999999999
Q ss_pred eeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCCh-HHHhhcCeeecccc---ccccc-cchhccCCCCC------
Q 037346 965 LRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGL-HDLRTRLSIIPQDP---TMFEG-TTRSNLDPLEE------ 1033 (1156)
Q Consensus 965 L~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~-~~LR~~i~~VpQdp---~LF~g-TIr~Nl~~~~~------ 1033 (1156)
|.|+||||||||+++|+|+++|++|+|.++|.++...+. ..+|++++||||++ .+|.+ |+++|+.+...
T Consensus 294 l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 373 (510)
T PRK09700 294 FAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGY 373 (510)
T ss_pred EECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccc
Confidence 999999999999999999999999999999999876543 45678899999984 57764 99999864311
Q ss_pred ------CC----HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHH
Q 037346 1034 ------HA----DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLR 1095 (1156)
Q Consensus 1034 ------~~----deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~ 1095 (1156)
.. .+++.++++..++. +.....|..|..+ ||||+++|+|||||||||+||+.+.+.+.+.|+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~ 453 (510)
T PRK09700 374 KGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMR 453 (510)
T ss_pred cccccccChHHHHHHHHHHHHhcCCCCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHH
Confidence 01 23477899999996 6666666666544 899999999999999999999999999999998
Q ss_pred Hhc-CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhH
Q 037346 1096 QHF-SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTK 1135 (1156)
Q Consensus 1096 ~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~e 1135 (1156)
++. ++.|||+|||+++.+. .||+|++|++|+|++.+++.+
T Consensus 454 ~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 454 QLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecCcc
Confidence 763 4789999999998775 599999999999999987744
No 59
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-59 Score=526.84 Aligned_cols=426 Identities=20% Similarity=0.327 Sum_probs=345.1
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
..+++-.++|.++|+++...+..-..+..+||++||+..|++..|..+++...| .+..+...++..+.+.+++|+
T Consensus 85 AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P-----~~~a~~~~~~~~i~L~f~~~~ 159 (573)
T COG4987 85 ATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAP-----AVVALVLIAVVTIGLSFFSIP 159 (573)
T ss_pred HHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhh-----HHHHHHHHHHHHHHHHHhhHH
Confidence 456888899999999999999999999999999999996666555555554444 444444445555556667777
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHH
Q 037346 792 VLIVF-VPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIA 870 (1156)
Q Consensus 792 l~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 870 (1156)
+++.+ +.++++.+.+...+.+..+...+.-...++.+.+++.|.+.|....+.||+++.+.+.+.+..+...+......
T Consensus 160 ~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~ 239 (573)
T COG4987 160 LALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQA 239 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75543 33444455555666666666666667778899999999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCC-----------------------cc-chHHHHHHHhHHHHHHHHhhcC
Q 037346 871 GAMEWLRFCIDMLSSITFA-FSLAFLISVPNG-----------------------II-HPYKNLERKIISVERILQCACI 925 (1156)
Q Consensus 871 ~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~-----------------------~~-~~~~~~~~~~~s~~Ri~~~~~~ 925 (1156)
....|....+.++..+.+. ..+........| .. ....++.....|..|+.++.+.
T Consensus 240 ~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q 319 (573)
T COG4987 240 RFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQ 319 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccC
Confidence 8888877777666554443 111111100000 01 2225666777889999987766
Q ss_pred CCCCcccccCCCCCCCCCCCC-eEEEEEEEEEEcCC---------------CCceeeCCCCCCHHHHHHHHhhcccCCCc
Q 037346 926 PSEPALVIEATKPNNSRPSHG-EVNIRHLQVRYAPN---------------LPLVLRGRTGSGKSTLIQTLFRIVESTAG 989 (1156)
Q Consensus 926 ~~e~~~~~~~~~~~~~~p~~g-~I~~~~Vsf~Y~~~---------------~~~vL~G~SGsGKSTL~~lL~rl~~p~~G 989 (1156)
++|.... ....|..+ .++++||+|+|+.. ++++|.||||||||||+++|.|.|+|++|
T Consensus 320 ~~e~~~~------~~~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G 393 (573)
T COG4987 320 KPEVTFP------DEQTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQG 393 (573)
T ss_pred CcccCCC------ccccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCC
Confidence 5554321 11112222 78999999999644 44567799999999999999999999999
Q ss_pred eEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc------
Q 037346 990 HILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ------ 1062 (1156)
Q Consensus 990 ~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~------ 1062 (1156)
+|..+|.+++.++.+++|+.|++++|.++||+||+|+||...+ +.+|||+|+||+++||++++++.|+||+|.
T Consensus 394 ~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~ 473 (573)
T COG4987 394 SITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGR 473 (573)
T ss_pred eeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCC
Confidence 9999999999999999999999999999999999999998876 467999999999999999999999999975
Q ss_pred ------------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeee
Q 037346 1063 ------------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEY 1130 (1156)
Q Consensus 1063 ------------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~ 1130 (1156)
||+||++++++||||||.+||++||+.|.+.|.+..+|+|+|+||||+.-+..||||+|||+|+++|+
T Consensus 474 ~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~ 553 (573)
T COG4987 474 RLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEE 553 (573)
T ss_pred cCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeec
Confidence 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhcCCCChHHHHHH
Q 037346 1131 DSPTKLLENKSSSFAQLVA 1149 (1156)
Q Consensus 1131 G~~~eLl~~~~g~f~~l~~ 1149 (1156)
|+|++|++ ++|.|++|++
T Consensus 554 G~~~~Ll~-~~g~~~~l~q 571 (573)
T COG4987 554 GTHAELLA-NNGRYKRLYQ 571 (573)
T ss_pred CCHHhhhc-cccHHHHHhc
Confidence 99999998 4899999975
No 60
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=9.1e-61 Score=583.14 Aligned_cols=424 Identities=22% Similarity=0.346 Sum_probs=327.2
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCC--CCCCcEEEEc---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGV--PKESGIIRLC--------------- 420 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~--~~~~G~i~~~--------------- 420 (1156)
|+++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 46899999995 357999999999999999999999999999999999996 7999999885
Q ss_pred --------C-----------------------eEEEEecC-CcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhC
Q 037346 421 --------G-----------------------TKAYVAQS-PWIQS-GKIEENILFGKE---MD----RERYERVLEACS 460 (1156)
Q Consensus 421 --------g-----------------------~~~~v~Q~-~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~ 460 (1156)
| .++|++|+ +.++. .|++||+.++.. .+ .++..++++.++
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 157 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQ 157 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC
Confidence 1 26999997 55654 599999987421 22 235566777777
Q ss_pred CchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEc
Q 037346 461 LKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYAT 537 (1156)
Q Consensus 461 l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vt 537 (1156)
+.+..+ +...+|||||||||+|||||+.+|++|||||||++||+.+++++.+.+.. ..|+|||+||
T Consensus 158 l~~~~~-----------~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivt 226 (520)
T TIGR03269 158 LSHRIT-----------HIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTS 226 (520)
T ss_pred Chhhhh-----------cCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe
Confidence 754433 34578999999999999999999999999999999999999998776543 3488999999
Q ss_pred cCCCccc-cCCEEEEEeCCeEEEccChHHHHhcCcchHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchh
Q 037346 538 HQVEFLP-AADLILVIKDGKITQAGKYSDILNSGTDFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVN 616 (1156)
Q Consensus 538 H~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (1156)
|+++.+. .||+|++|++|+++..|+++++... .. .... .. .. .
T Consensus 227 Hd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------~~----~~~~---~~-----------~~-~----------- 270 (520)
T TIGR03269 227 HWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV------FM----EGVS---EV-----------EK-E----------- 270 (520)
T ss_pred CCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH------HH----hhch---hh-----------cc-c-----------
Confidence 9999986 5999999999999988887665321 00 0000 00 00 0
Q ss_pred cccccCCCCcccccCccCcchhHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhcccccccc
Q 037346 617 KEENKNFQSDDEAALPKGQLVQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDV 696 (1156)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 696 (1156)
.
T Consensus 271 --------~----------------------------------------------------------------------- 271 (520)
T TIGR03269 271 --------C----------------------------------------------------------------------- 271 (520)
T ss_pred --------c-----------------------------------------------------------------------
Confidence 0
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHH
Q 037346 697 NPAVGASTLIIVYVGAGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMI 776 (1156)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~ 776 (1156)
..+.++- .+. ..+
T Consensus 272 -----------------------------------------~~~~~~~--~l~----~~~-------------------- 284 (520)
T TIGR03269 272 -----------------------------------------EVEVGEP--IIK----VRN-------------------- 284 (520)
T ss_pred -----------------------------------------ccCCCCc--eEE----Eec--------------------
Confidence 0000000 000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHH
Q 037346 777 QLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNM 856 (1156)
Q Consensus 777 ~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~ 856 (1156)
T Consensus 285 -------------------------------------------------------------------------------- 284 (520)
T TIGR03269 285 -------------------------------------------------------------------------------- 284 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCC
Q 037346 857 KLIDEYSRPKFHIAGAMEWLRFCIDMLSSITFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEAT 936 (1156)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~ 936 (1156)
T Consensus 285 -------------------------------------------------------------------------------- 284 (520)
T TIGR03269 285 -------------------------------------------------------------------------------- 284 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCC---CCCeEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEc-Ce---eCCCCC---hHHH
Q 037346 937 KPNNSRP---SHGEVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILID-GK---DISLIG---LHDL 1006 (1156)
Q Consensus 937 ~~~~~~p---~~g~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~id-G~---di~~i~---~~~L 1006 (1156)
....++ ..+...++|++|..++++.++|.|+||||||||+++|+|+.+|++|+|.++ |. ++...+ ...+
T Consensus 285 -l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~ 363 (520)
T TIGR03269 285 -VSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRA 363 (520)
T ss_pred -cEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHH
Confidence 000000 011247999999999999999999999999999999999999999999996 64 344433 2356
Q ss_pred hhcCeeeccccccccc-cchhccCCC---C-CC--CHHHHHHHHHHcCCCh-----HHHhhcCCcccc-------ccccc
Q 037346 1007 RTRLSIIPQDPTMFEG-TTRSNLDPL---E-EH--ADEQIWEALDKCQLGD-----EVRKKKGKLDSQ-------GRVLL 1067 (1156)
Q Consensus 1007 R~~i~~VpQdp~LF~g-TIr~Nl~~~---~-~~--~deei~~al~~~~l~~-----~i~~lp~gl~s~-------ARALL 1067 (1156)
|++++||||++.+|.. |+++|+... . +. .++++.++++.+++.+ +....|..|..+ ||||+
T Consensus 364 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~ 443 (520)
T TIGR03269 364 KRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLI 443 (520)
T ss_pred hhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 7789999999988874 999999531 1 11 1345788999999964 455556666544 89999
Q ss_pred cCCCEEEEecCCcCCCHHHHHHHHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhc
Q 037346 1068 KKSKVLVLDEATASVDTATDNQIQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLE 1138 (1156)
Q Consensus 1068 r~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~ 1138 (1156)
.+|+||||||||++||+.+.+.+.+.|+++.+ +.|||+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 444 ~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 444 KEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999988743 7899999999998875 99999999999999999998864
No 61
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.5e-58 Score=609.44 Aligned_cols=510 Identities=17% Similarity=0.166 Sum_probs=349.1
Q ss_pred cchHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-c-cchhhHH------HHHHHHHHHHHHHH
Q 037346 69 LRLAKVLFFSAWQEI--LFIAILALLYTLATYVGPYLIDNFVQYLNGRQA-F-EYEGYVL------CLSERHWFFQVQQF 138 (1156)
Q Consensus 69 ~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~-~-~~~g~~l------~~~~~~~~~~~~~~ 138 (1156)
.+.++.+++..++.+ .+.+++.++..++....|+.++...+....... . .+.++++ .++.....+...+.
T Consensus 901 ~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~ 980 (1622)
T PLN03130 901 WKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMS 980 (1622)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555533222 222334444556666778888776664322111 1 1111111 11111112234566
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---HH-----HHH---HHHHHHH---H----HHHHHHH
Q 037346 139 GIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---AL-----LIL---YKKLGLA---S----IATLLAT 200 (1156)
Q Consensus 139 ~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---~~-----~ll---~~~lg~~---~----l~~~~~~ 200 (1156)
+.+.-..+...+|+++++.+...++++++|+++|++++|++. .+ .++ ...++.. + +..++++
T Consensus 981 ~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~ 1060 (1622)
T PLN03130 981 SLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIM 1060 (1622)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888889999999999999999999999999999999987 00 000 0000000 0 0000011
Q ss_pred HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH--HHHH---HHHHHHH-HHHHH-
Q 037346 201 AI---VMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKKNET--AWLK---KSVYTEA-MISFF- 270 (1156)
Q Consensus 201 ~~---~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~~e~--~~~~---~~~~~~~-~~~~~- 270 (1156)
++ ++.+..++.+..+..++.....+....+...|.++|+++||.|++|.|-.+. +... +..+... ....+
T Consensus 1061 pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~ 1140 (1622)
T PLN03130 1061 PLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLA 1140 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 0111111111122222222233344567789999999999999999322111 1111 1111111 00010
Q ss_pred --HHHHHHHHHHHHHHHHHHh-CCCcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 037346 271 --CWGAPTFVSVVTFGSCILL-GIPLE-----SGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQ 342 (1156)
Q Consensus 271 --~~~~~~~~~~~~f~~~~~~-~~~lt-----~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~ 342 (1156)
......+ .++..+.+.+. ++... ++.+-.++++...+..++..+......+..+.+|.+|+.++++.|++.
T Consensus 1141 ~~l~~~~~~-~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~ 1219 (1622)
T PLN03130 1141 IRLETLGGL-MIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEA 1219 (1622)
T ss_pred HHHHHHHHH-HHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 1011111 11111222222 22211 233333444555666777777777888899999999999999876443
Q ss_pred cccc-ccCCC--CCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEE
Q 037346 343 TDVL-EKMPR--GNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRL 419 (1156)
Q Consensus 343 ~~~~-~~~~~--~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~ 419 (1156)
+... ...+. .+..+.|+|+|++|+|+.+ .+++|+|+||+|++||.+||||+||||||||+++|+|+++|++|+|.+
T Consensus 1220 ~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~I 1298 (1622)
T PLN03130 1220 PLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILI 1298 (1622)
T ss_pred cccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEE
Confidence 2110 11111 1234679999999999632 347999999999999999999999999999999999999999999999
Q ss_pred cCe-------------EEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 420 CGT-------------KAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 420 ~g~-------------~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
||. ++||||+|.+|+|||||||.++.+.++++..++++.|++.+++..+|+|++|.||++|.+||||
T Consensus 1299 DG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgG 1378 (1622)
T PLN03130 1299 DGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVG 1378 (1622)
T ss_pred CCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHH
Confidence 993 6999999999999999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHH
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
||||++|||||+++|+|||||||||+||+++++.|.+.+.. .+++|+|+|+||++++..||+|++|++|+|++.|+|++
T Consensus 1379 QrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~e 1458 (1622)
T PLN03130 1379 QRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPEN 1458 (1622)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999988776654 57899999999999999999999999999999999999
Q ss_pred HHhc-CcchHHHHHhh
Q 037346 566 ILNS-GTDFMELVGAH 580 (1156)
Q Consensus 566 l~~~-~~~~~~~~~~~ 580 (1156)
+++. ++.|.++++..
T Consensus 1459 Ll~~~~g~f~~L~~~~ 1474 (1622)
T PLN03130 1459 LLSNEGSAFSKMVQST 1474 (1622)
T ss_pred HHhCCCCHHHHHHHHc
Confidence 9986 57788887543
No 62
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-61 Score=522.73 Aligned_cols=497 Identities=22% Similarity=0.302 Sum_probs=367.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchh---h-HHH----------HHHHHHHHHHHHHHHHHHHHHHH
Q 037346 83 ILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEYEG---Y-VLC----------LSERHWFFQVQQFGIRFRATLFA 148 (1156)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~~g---~-~l~----------~~~~~~~~~~~~~~~~~r~~l~~ 148 (1156)
.+...++..+.-++....|.+.+.+++.+..+..+.+.. + ++. +....-.|.+-++.......+-.
T Consensus 217 v~~cl~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~ 296 (790)
T KOG0056|consen 217 VVFCLFLLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIET 296 (790)
T ss_pred HHHHHHHHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHH
Confidence 344455566666777888999999999887443332211 1 110 11111111112233333445567
Q ss_pred HHHHHHhcCCccccCCCCHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHH---HHH
Q 037346 149 MIYNKGLTLSGQAKQGNTSGEIINLIAVDAER------------------ALLILYKKLGLASIATLLATAIVM---LAN 207 (1156)
Q Consensus 149 ~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~------------------~~~ll~~~lg~~~l~~~~~~~~~~---~~~ 207 (1156)
.+|+|...++...+-++.+|+++..|..-+.. .+.+.|..+-.-...|+++++.+. .+.
T Consensus 297 ~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvtll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~T 376 (790)
T KOG0056|consen 297 ELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVTLLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVT 376 (790)
T ss_pred HHHHHHHhhceeeeecccccceeehhccCcchhhHHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhhee
Confidence 78899988888777778889887766533332 223333333333344444332211 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH------HHHHHHHHHHHHHHHHHHHHHHH---HH--HHH
Q 037346 208 FPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE------LKKNETAWLKKSVYTEAMISFFC---WG--APT 276 (1156)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e------~r~~e~~~~~~~~~~~~~~~~~~---~~--~~~ 276 (1156)
..+.....++++++...-.+.-....+.+-+..+||.|+.| .|+.-+++.+.-....+-..++. .. ...
T Consensus 377 i~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lg 456 (790)
T KOG0056|consen 377 IKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLG 456 (790)
T ss_pred eeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH
Confidence 22233344555555544444445667888999999999988 44444444433222211111111 11 011
Q ss_pred HHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCc
Q 037346 277 FVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSDT 356 (1156)
Q Consensus 277 ~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~~ 356 (1156)
++....+.+|.+..+.+|.|+..-+.+|+..+.+|++.+...+..++...+-++|+.+.+++++...+.....|.....+
T Consensus 457 ll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G 536 (790)
T KOG0056|consen 457 LLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQG 536 (790)
T ss_pred HhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCC
Confidence 22233355666667889999999999999999999999999999999999999999999987654322222233344567
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.|+|+|++|+|+ +++++|+||||++++|+.+|+|||||+||||+++++.++++.++|.|.+||+ |
T Consensus 537 ~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~I 614 (790)
T KOG0056|consen 537 KIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSI 614 (790)
T ss_pred eEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhc
Confidence 899999999997 5689999999999999999999999999999999999999999999999994 7
Q ss_pred EEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 424 AYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 424 ~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
|.|||+..+||.||..||.++++ ...|.+.++.+++++++.+..+|+|++|.|||+|-.||||+|||||+||+++++|.
T Consensus 615 GVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~ 694 (790)
T KOG0056|consen 615 GVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPS 694 (790)
T ss_pred CcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCc
Confidence 99999999999999999999986 45677888899999999999999999999999999999999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhc-CcchHHHHHhh
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNS-GTDFMELVGAH 580 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 580 (1156)
|++|||+|||||.++++.|-..+.+ ..++|.|+|.||++++-+||.|+++++|+|+|.|+|+|+..+ ++.|.++.+.+
T Consensus 695 iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~q 774 (790)
T KOG0056|consen 695 IILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQ 774 (790)
T ss_pred EEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHH
Confidence 9999999999999999988544433 578999999999999999999999999999999999999987 77899998765
Q ss_pred h
Q 037346 581 K 581 (1156)
Q Consensus 581 ~ 581 (1156)
.
T Consensus 775 q 775 (790)
T KOG0056|consen 775 Q 775 (790)
T ss_pred H
Confidence 4
No 63
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=9.9e-59 Score=574.14 Aligned_cols=430 Identities=23% Similarity=0.359 Sum_probs=363.1
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.++...++..+++++++.|.++|++.+.|++++|++ .|+..++..+...+..++..++.+++.++++++++|+
T Consensus 81 ~~~~~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~-----~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~ 155 (571)
T TIGR02203 81 VSNKVVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRIT-----FDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQ 155 (571)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 45678888999999999999999999999999999999 7888888878888888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++.++++.+++..++.+..++..+......++..+.+.|.++|+.+||+++.++++.+++.+..+...+.......
T Consensus 156 l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (571)
T TIGR02203 156 LTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTS 235 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888877777777777788878888888888889999999999999999999999999999999999988887777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCc-----------------------cchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSITFAFSLAFL-ISVPNGI-----------------------IHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~-----------------------~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
...+......++..+...+.+.+. .....+. ......+.....+.+|+.++.+.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 315 (571)
T TIGR02203 236 AGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPP 315 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 666655554444332222111110 0111111 1112567778889999999987665
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCC---------------CceeeCCCCCCHHHHHHHHhhcccCCCceEE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNL---------------PLVLRGRTGSGKSTLIQTLFRIVESTAGHIL 992 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~---------------~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~ 992 (1156)
+.+.. ..+. .+..+.|+|+||+|+|++.. .++|+|+||||||||+++|+|+|+|++|+|+
T Consensus 316 ~~~~~---~~~~--~~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~ 390 (571)
T TIGR02203 316 EKDTG---TRAI--ERARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQIL 390 (571)
T ss_pred CCCCC---CCCC--CCCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEE
Confidence 53211 1111 12346799999999996532 2456699999999999999999999999999
Q ss_pred EcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC--CCCHHHHHHHHHHcCCChHHHhhcCCcccc--------
Q 037346 993 IDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE--EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------- 1062 (1156)
Q Consensus 993 idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~--~~~deei~~al~~~~l~~~i~~lp~gl~s~-------- 1062 (1156)
+||+|+++++.+++|++++||||+|++|+|||||||.+++ +.+|++++++++.+++++++.++|+|||+.
T Consensus 391 i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~L 470 (571)
T TIGR02203 391 LDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLL 470 (571)
T ss_pred ECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcC
Confidence 9999999999999999999999999999999999999875 578999999999999999999999999975
Q ss_pred ----------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecC
Q 037346 1063 ----------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1063 ----------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~ 1132 (1156)
|||++++|+|||||||||+||++|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+
T Consensus 471 SgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~ 550 (571)
T TIGR02203 471 SGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGT 550 (571)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCC
Confidence 8999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred hhHHhcCCCChHHHHHHHHh
Q 037346 1133 PTKLLENKSSSFAQLVAEYT 1152 (1156)
Q Consensus 1133 ~~eLl~~~~g~f~~l~~~~~ 1152 (1156)
|++|+++ ++.|+++++++.
T Consensus 551 ~~~l~~~-~~~~~~~~~~~~ 569 (571)
T TIGR02203 551 HNELLAR-NGLYAQLHNMQF 569 (571)
T ss_pred HHHHHHc-CCHHHHHHHHhh
Confidence 9999975 689999988654
No 64
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-60 Score=575.54 Aligned_cols=425 Identities=20% Similarity=0.278 Sum_probs=324.1
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------e
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------T 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------~ 422 (1156)
.++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFP---GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEEC---CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 589999999996 34699999999999999999999999999999999999999999999987 2
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCC------CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKE------MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~------~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
++|++|++.++. .|++||+.++.. .+ .++..++++.+++.... .....+||||||||+
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgGq~qrv 149 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDP-----------DTPLKYLSIGQRQMV 149 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCc-----------CCchhhCCHHHHHHH
Confidence 799999998776 499999998631 12 23445566666664322 244578999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
+|||||+.+|+++||||||++||+.+.+++.+.+.. .+|+|+|++||+++.+. .||+|++|++|+++..++..+...
T Consensus 150 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 229 (501)
T PRK11288 150 EIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD 229 (501)
T ss_pred HHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC
Confidence 999999999999999999999999999999876644 45899999999999886 599999999999975432100000
Q ss_pred cCcchHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCccc
Q 037346 569 SGTDFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGKVG 648 (1156)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~~ 648 (1156)
.+.
T Consensus 230 ----------------------------------------------------------------------~~~------- 232 (501)
T PRK11288 230 ----------------------------------------------------------------------RDQ------- 232 (501)
T ss_pred ----------------------------------------------------------------------HHH-------
Confidence 000
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 037346 649 FSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNKMHVCI 728 (1156)
Q Consensus 649 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l 728 (1156)
+ .....+ .
T Consensus 233 ---~---~~~~~~-----------------------------~------------------------------------- 240 (501)
T PRK11288 233 ---L---VQAMVG-----------------------------R------------------------------------- 240 (501)
T ss_pred ---H---HHHhcC-----------------------------C-------------------------------------
Confidence 0 000000 0
Q ss_pred ccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 729 FRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQ 808 (1156)
Q Consensus 729 l~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~ 808 (1156)
+ . .+..
T Consensus 241 ---~---------------~------~~~~-------------------------------------------------- 246 (501)
T PRK11288 241 ---E---------------I------GDIY-------------------------------------------------- 246 (501)
T ss_pred ---C---------------c------cccc--------------------------------------------------
Confidence 0 0 0000
Q ss_pred HHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 809 YYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSITF 888 (1156)
Q Consensus 809 ~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 888 (1156)
.
T Consensus 247 ----------------~--------------------------------------------------------------- 247 (501)
T PRK11288 247 ----------------G--------------------------------------------------------------- 247 (501)
T ss_pred ----------------c---------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCCceeeCC
Q 037346 889 AFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLPLVLRGR 968 (1156)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~~vL~G~ 968 (1156)
... .+..+. .....+.. .+ -.++|++|+.++++.++|.|+
T Consensus 248 ---------~~~------------------------~~~~~~-~l~~~~~~-----~~-~~l~~isl~i~~Ge~~~iiG~ 287 (501)
T PRK11288 248 ---------YRP------------------------RPLGEV-RLRLDGLK-----GP-GLREPISFSVRAGEIVGLFGL 287 (501)
T ss_pred ---------ccc------------------------cCCCCc-EEEEeccc-----cC-CcccceeEEEeCCcEEEEEcC
Confidence 000 000000 00000000 01 158999999999999999999
Q ss_pred CCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCC-hHHHhhcCeeeccccc---cc-cccchhccCCCCC----------
Q 037346 969 TGSGKSTLIQTLFRIVESTAGHILIDGKDISLIG-LHDLRTRLSIIPQDPT---MF-EGTTRSNLDPLEE---------- 1033 (1156)
Q Consensus 969 SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~LR~~i~~VpQdp~---LF-~gTIr~Nl~~~~~---------- 1033 (1156)
||||||||+++|+|+++|++|+|.+||.++...+ .+.+|++++|+||+|. +| ..|+.+|+.....
T Consensus 288 NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~ 367 (501)
T PRK11288 288 VGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLI 367 (501)
T ss_pred CCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhccccccc
Confidence 9999999999999999999999999999987543 3456788999999973 55 4799999864210
Q ss_pred CC---HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc-CCc
Q 037346 1034 HA---DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF-SDC 1101 (1156)
Q Consensus 1034 ~~---deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~-~~~ 1101 (1156)
.. ++++.++++..++. +.....|..|..+ ||||+.+|+||||||||++||..+.+.+.+.|+++. .+.
T Consensus 368 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~ 447 (501)
T PRK11288 368 NNRWEAENADRFIRSLNIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGV 447 (501)
T ss_pred ChHHHHHHHHHHHHhcCcccCCccCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCC
Confidence 01 24578899999994 5555555555544 899999999999999999999999999999998764 378
Q ss_pred eEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHh
Q 037346 1102 TVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLL 1137 (1156)
Q Consensus 1102 TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl 1137 (1156)
|||+|||+++.+. -||+|++|++|++++.|++++..
T Consensus 448 tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 448 AVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred EEEEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 9999999999885 59999999999999999988755
No 65
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.7e-57 Score=603.55 Aligned_cols=441 Identities=16% Similarity=0.172 Sum_probs=326.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH-------HHHHHH----HHHH---HHHHHHHHHHHHHH
Q 037346 139 GIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER-------ALLILY----KKLG---LASIATLLATAIVM 204 (1156)
Q Consensus 139 ~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~-------~~~ll~----~~lg---~~~l~~~~~~~~~~ 204 (1156)
+.+....+...+|+++++.+...+++.++|+++|++++|++. .+..+. ..++ +.++....++++++
T Consensus 1026 ~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i 1105 (1560)
T PTZ00243 1026 MRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALV 1105 (1560)
T ss_pred HHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445678899999999999999999999999999999987 000000 0000 00000000001111
Q ss_pred H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHHHH---HHHHHH----HHHHHH
Q 037346 205 L-------ANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWEL--KKNETAW---LKKSVY----TEAMIS 268 (1156)
Q Consensus 205 ~-------~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~--r~~e~~~---~~~~~~----~~~~~~ 268 (1156)
+ +...+.+..+..++......+.-.+.++|.++|+++||.|++|. .++-.+. ..+..+ ...+..
T Consensus 1106 ~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~ 1185 (1560)
T PTZ00243 1106 PCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLG 1185 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11112222233333334445555789999999999999999991 1111111 111011 111111
Q ss_pred HHHH--HHHHHHHHHHHHHH--HHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc-
Q 037346 269 FFCW--GAPTFVSVVTFGSC--ILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQT- 343 (1156)
Q Consensus 269 ~~~~--~~~~~~~~~~f~~~--~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~- 343 (1156)
.... .....+.++.++++ ....+.+++|.+..++.+...+..|+..+...+..+..+..|.+||.++++..+.++
T Consensus 1186 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~ 1265 (1560)
T PTZ00243 1186 VRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDM 1265 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 1110 01111111222222 222345788988888888888999999999999999999999999999996422110
Q ss_pred cc-----------------------c-ccC-----CCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcC
Q 037346 344 DV-----------------------L-EKM-----PRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGT 394 (1156)
Q Consensus 344 ~~-----------------------~-~~~-----~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~ 394 (1156)
.. . ... +.....+.|+|+||+|+|+.. ..++|+|+||+|++||++||||+
T Consensus 1266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGr 1344 (1560)
T PTZ00243 1266 PELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGR 1344 (1560)
T ss_pred ccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECC
Confidence 00 0 000 011123579999999999742 34699999999999999999999
Q ss_pred CCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCC
Q 037346 395 VGSGKSSCLSCILGGVPKESGIIRLCGT-------------KAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSL 461 (1156)
Q Consensus 395 ~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l 461 (1156)
+|||||||+++|+|+++|++|+|.+||. ++||||+|.+|++||||||..+.++++++++++++.|++
T Consensus 1345 TGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l 1424 (1560)
T PTZ00243 1345 TGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGL 1424 (1560)
T ss_pred CCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCCC
Confidence 9999999999999999999999999993 699999999999999999998778889999999999999
Q ss_pred chhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC-CCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccC
Q 037346 462 KKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD-ADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQ 539 (1156)
Q Consensus 462 ~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~-~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~ 539 (1156)
.+++..+|+|++|.||++|.+||||||||++|||||+++ |+|||||||||+||+++++.|.+.+.. .+++|+|+|+||
T Consensus 1425 ~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHR 1504 (1560)
T PTZ00243 1425 RERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHR 1504 (1560)
T ss_pred hHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEecc
Confidence 999999999999999999999999999999999999995 899999999999999999998776654 578999999999
Q ss_pred CCccccCCEEEEEeCCeEEEccChHHHHhc-CcchHHHHHhh
Q 037346 540 VEFLPAADLILVIKDGKITQAGKYSDILNS-GTDFMELVGAH 580 (1156)
Q Consensus 540 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 580 (1156)
++.+..||+|++|++|+|++.|+|++++++ ++.|.+++...
T Consensus 1505 l~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1505 LHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred HHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 999999999999999999999999999974 67788887543
No 66
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-59 Score=567.62 Aligned_cols=450 Identities=18% Similarity=0.294 Sum_probs=315.8
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCCC-
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQS- 434 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~~- 434 (1156)
|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.++.
T Consensus 2 l~i~~ls~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (530)
T PRK15064 2 LSTANITMQFG---AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQFAFEE 78 (530)
T ss_pred EEEEEEEEEeC---CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCcCCC
Confidence 78999999996 35799999999999999999999999999999999999999999999986 6899999987765
Q ss_pred ccHHHHhhcCCCC---------------------------------------CHHHHHHHHHHhCCchhhhhCCCCCccc
Q 037346 435 GKIEENILFGKEM---------------------------------------DRERYERVLEACSLKKDLEVLPFGDQTI 475 (1156)
Q Consensus 435 ~ti~eni~~~~~~---------------------------------------~~~~~~~~~~~~~l~~~~~~~~~g~~t~ 475 (1156)
.|++||+.++... .+++..++++.+++.+...
T Consensus 79 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~--------- 149 (530)
T PRK15064 79 FTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQH--------- 149 (530)
T ss_pred CcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHh---------
Confidence 5999999875310 0122333444444432111
Q ss_pred cccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccc-cCCEEEEEeC
Q 037346 476 IGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLP-AADLILVIKD 554 (1156)
Q Consensus 476 v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~-~~d~i~~l~~ 554 (1156)
.....+||||||||++|||||+.+|+++||||||++||+.+..++.+.+. ..+.|||+|||+++.+. .||+|++|++
T Consensus 150 -~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~-~~~~tiiivsHd~~~~~~~~d~i~~l~~ 227 (530)
T PRK15064 150 -YGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLN-ERNSTMIIISHDRHFLNSVCTHMADLDY 227 (530)
T ss_pred -cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHH-hCCCeEEEEeCCHHHHHhhcceEEEEeC
Confidence 23457899999999999999999999999999999999999999877653 45789999999999986 5999999999
Q ss_pred CeE-EEccChHHHHhcCcchH-HHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCc
Q 037346 555 GKI-TQAGKYSDILNSGTDFM-ELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALP 632 (1156)
Q Consensus 555 G~i-~~~g~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1156)
|++ ++.|+++++++...... .......
T Consensus 228 g~i~~~~g~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 256 (530)
T PRK15064 228 GELRVYPGNYDEYMTAATQARERLLADNA--------------------------------------------------- 256 (530)
T ss_pred CEEEEecCCHHHHHHHHHHHHHHHHHHHH---------------------------------------------------
Confidence 999 47899887753211000 0000000
Q ss_pred cCcchhHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHH
Q 037346 633 KGQLVQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGA 712 (1156)
Q Consensus 633 ~~~~~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (1156)
..+.+.+. ...++.
T Consensus 257 ---~~~~~~~~--------~~~~~~------------------------------------------------------- 270 (530)
T PRK15064 257 ---KKKAQIAE--------LQSFVS------------------------------------------------------- 270 (530)
T ss_pred ---HHHHHHHH--------HHHHHH-------------------------------------------------------
Confidence 00000000 000000
Q ss_pred HHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 713 GYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQV 792 (1156)
Q Consensus 713 ~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 792 (1156)
|... .. ..
T Consensus 271 ----------------------------------~~~~----~~-~~--------------------------------- 278 (530)
T PRK15064 271 ----------------------------------RFSA----NA-SK--------------------------------- 278 (530)
T ss_pred ----------------------------------Hhhc----cc-hh---------------------------------
Confidence 0000 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHH
Q 037346 793 LIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGA 872 (1156)
Q Consensus 793 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 872 (1156)
........++.
T Consensus 279 -----------------~~~~~~~~~~~---------------------------------------------------- 289 (530)
T PRK15064 279 -----------------AKQATSRAKQI---------------------------------------------------- 289 (530)
T ss_pred -----------------hHHHHHHHHHH----------------------------------------------------
Confidence 00000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCC--CCcccccCCCCCCCCCCCCeEEE
Q 037346 873 MEWLRFCIDMLSSITFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPS--EPALVIEATKPNNSRPSHGEVNI 950 (1156)
Q Consensus 873 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~--e~~~~~~~~~~~~~~p~~g~I~~ 950 (1156)
++... ...+. +........ ...-+.+..+++
T Consensus 290 --------------------------------------------~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 322 (530)
T PRK15064 290 --------------------------------------------DKIKL-EEVKPSSRQNPFIRFE--QDKKLHRNALEV 322 (530)
T ss_pred --------------------------------------------hhccc-cccCCccccCceeeCC--CCCCCCCceEEE
Confidence 00000 00000 000000000 000001123555
Q ss_pred EEEEEEE-------------cCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccc
Q 037346 951 RHLQVRY-------------APNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDP 1017 (1156)
Q Consensus 951 ~~Vsf~Y-------------~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp 1017 (1156)
+||+++| .+++.++|.|+||||||||+++|+|+++|++|+|.++| +++++||||++
T Consensus 323 ~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i~~~~q~~ 391 (530)
T PRK15064 323 ENLTKGFDNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANIGYYAQDH 391 (530)
T ss_pred EeeEEeeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEEEEEcccc
Confidence 5555555 45566678899999999999999999999999999998 35799999998
Q ss_pred c--ccc-ccchhccCCCC--CCCHHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCH
Q 037346 1018 T--MFE-GTTRSNLDPLE--EHADEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDT 1084 (1156)
Q Consensus 1018 ~--LF~-gTIr~Nl~~~~--~~~deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~ 1084 (1156)
. ++. .|+++|+.... ...++++.++++..++. +.....+..|..+ |||++++|+||||||||++||+
T Consensus 392 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~ 471 (530)
T PRK15064 392 AYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDM 471 (530)
T ss_pred cccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCH
Confidence 4 443 59999986432 22356788999999995 5666666666544 8999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEe-eecChhHHhcC
Q 037346 1085 ATDNQIQQTLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIK-EYDSPTKLLEN 1139 (1156)
Q Consensus 1085 ~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~Iv-E~G~~~eLl~~ 1139 (1156)
.+...+.+.|++. +.|||+|||+++.+.. ||+|++|++|+++ ..|+++++++.
T Consensus 472 ~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 472 ESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred HHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 9999999999886 5699999999998875 9999999999998 78999998854
No 67
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=5.1e-58 Score=567.66 Aligned_cols=426 Identities=20% Similarity=0.293 Sum_probs=337.4
Q ss_pred HHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 718 TQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFV 797 (1156)
Q Consensus 718 ~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~ 797 (1156)
..++.++++++++.|..+|++.+.|++++|++ .|+..+.......+..++..++..++.+++++..+|+++++++
T Consensus 89 ~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~-----~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l 163 (588)
T PRK13657 89 LAVLTEYFERIIQLPLAWHSQRGSGRALHTLL-----RGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLV 163 (588)
T ss_pred HHHHHHHHHHHHhCCHHHHCcCChHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455899999999999999999999999999 6666555544455555666666667777778888998888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 037346 798 PVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLR 877 (1156)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (1156)
.+++++..+..++.+..++..+......+...+.+.|.++|+++||+|+.++.+.+++.+..++..+..........+..
T Consensus 164 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (588)
T PRK13657 164 VLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALAS 243 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77676667777777777777777778888999999999999999999999999999999888887776655544444433
Q ss_pred HHHHHHHHHHHHHHHHH-HHHcCCCc-----------------------cchHHHHHHHhHHHHHHHHhhcCCCCCcccc
Q 037346 878 FCIDMLSSITFAFSLAF-LISVPNGI-----------------------IHPYKNLERKIISVERILQCACIPSEPALVI 933 (1156)
Q Consensus 878 ~~l~~~~~~~~~~~~~~-~~~~~~~~-----------------------~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~ 933 (1156)
...+++..+...++..+ ......+. ......+.....+.+|+.++.+.+++.+..
T Consensus 244 ~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~- 322 (588)
T PRK13657 244 VLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP- 322 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-
Confidence 33322221111111110 00001111 111244555667788888877654432110
Q ss_pred cCCCCCCCCCCCCeEEEEEEEEEEcCC--------------CCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCC
Q 037346 934 EATKPNNSRPSHGEVNIRHLQVRYAPN--------------LPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDIS 999 (1156)
Q Consensus 934 ~~~~~~~~~p~~g~I~~~~Vsf~Y~~~--------------~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~ 999 (1156)
..... ..+..+.|+|+||+|+|+++ +.++++|+||||||||+++|+|+|+|++|+|++||.|++
T Consensus 323 -~~~~~-~~~~~~~I~~~~vsf~y~~~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~ 400 (588)
T PRK13657 323 -PGAID-LGRVKGAVEFDDVSFSYDNSRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIR 400 (588)
T ss_pred -CCCCC-cCCCCCeEEEEEEEEEeCCCCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhh
Confidence 01000 01234679999999999632 234566999999999999999999999999999999999
Q ss_pred CCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc----------------
Q 037346 1000 LIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ---------------- 1062 (1156)
Q Consensus 1000 ~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~---------------- 1062 (1156)
+++.+++|++|+||||||.+|+|||||||.+++ +.+|+++++|++.+++++++.++|+|+||.
T Consensus 401 ~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRi 480 (588)
T PRK13657 401 TVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRL 480 (588)
T ss_pred hCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHH
Confidence 999999999999999999999999999999875 467999999999999999999999999975
Q ss_pred --ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCC
Q 037346 1063 --GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENK 1140 (1156)
Q Consensus 1063 --ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~ 1140 (1156)
||||+++|+|||||||||+||++|++.|.+.|++..+++|+|+||||+++++.||+|++|++|+++|.|+|++|+++
T Consensus 481 alARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~- 559 (588)
T PRK13657 481 AIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR- 559 (588)
T ss_pred HHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-
Confidence 89999999999999999999999999999999998889999999999999999999999999999999999999975
Q ss_pred CChHHHHHHHHh
Q 037346 1141 SSSFAQLVAEYT 1152 (1156)
Q Consensus 1141 ~g~f~~l~~~~~ 1152 (1156)
++.|++|++++.
T Consensus 560 ~~~y~~l~~~~~ 571 (588)
T PRK13657 560 GGRFAALLRAQG 571 (588)
T ss_pred CChHHHHHHHhh
Confidence 799999998654
No 68
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1e-59 Score=571.65 Aligned_cols=429 Identities=23% Similarity=0.350 Sum_probs=321.2
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC--CCcEEEEcC--------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK--ESGIIRLCG-------------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~--~~G~i~~~g-------------- 421 (1156)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 2 l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFG---GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeC---CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 78999999996 35799999999999999999999999999999999999987 799999987
Q ss_pred eEEEEecCCcCCC-ccHHHHhhcCCC-------CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 422 TKAYVAQSPWIQS-GKIEENILFGKE-------MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 422 ~~~~v~Q~~~~~~-~ti~eni~~~~~-------~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
.++|++|+|.++. .|++||+.++.. .+. ++.+++++.+++.+... .....+|||||||
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~----------~~~~~~LSgG~~q 148 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNV----------TRPVGDYGGGQQQ 148 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcc----------cCchhhCCHHHHH
Confidence 2799999997765 599999988642 111 23445566665543211 1235689999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
|++|||||+.+|+++||||||++||+.+.+++.+.+.. .+|+|+|++||+++.+. .||+|++|++|+++..|+.+++
T Consensus 149 rv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (500)
T TIGR02633 149 LVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTM 228 (500)
T ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccC
Confidence 99999999999999999999999999999999876543 45889999999999986 5999999999999876543221
Q ss_pred HhcCcchHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCc
Q 037346 567 LNSGTDFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGK 646 (1156)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~ 646 (1156)
... .....
T Consensus 229 ~~~-----~~~~~------------------------------------------------------------------- 236 (500)
T TIGR02633 229 SED-----DIITM------------------------------------------------------------------- 236 (500)
T ss_pred CHH-----HHHHH-------------------------------------------------------------------
Confidence 000 00000
Q ss_pred ccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037346 647 VGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNKMHV 726 (1156)
Q Consensus 647 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 726 (1156)
+. +. .. ..
T Consensus 237 --------~~----~~----------------------------~~-----~~--------------------------- 244 (500)
T TIGR02633 237 --------MV----GR----------------------------EI-----TS--------------------------- 244 (500)
T ss_pred --------Hh----Cc----------------------------cc-----cc---------------------------
Confidence 00 00 00 00
Q ss_pred HhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 727 CIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWY 806 (1156)
Q Consensus 727 ~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~ 806 (1156)
. .|. ...+.++
T Consensus 245 -~--~~~---~~~~~~~--------------------------------------------------------------- 255 (500)
T TIGR02633 245 -L--YPH---EPHEIGD--------------------------------------------------------------- 255 (500)
T ss_pred -c--ccc---cccCCCC---------------------------------------------------------------
Confidence 0 000 0000000
Q ss_pred HHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 037346 807 QQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSI 886 (1156)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 886 (1156)
T Consensus 256 -------------------------------------------------------------------------------- 255 (500)
T TIGR02633 256 -------------------------------------------------------------------------------- 255 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCC-CCeEEEEEEEEEEcCCCCcee
Q 037346 887 TFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPS-HGEVNIRHLQVRYAPNLPLVL 965 (1156)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~-~g~I~~~~Vsf~Y~~~~~~vL 965 (1156)
+.. +.......++. .+...++|++|...+++.++|
T Consensus 256 ------------------------------------------~~l--~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l 291 (500)
T TIGR02633 256 ------------------------------------------VIL--EARNLTCWDVINPHRKRVDDVSFSLRRGEILGV 291 (500)
T ss_pred ------------------------------------------ceE--EEeCCcccccccccccccccceeEEeCCcEEEE
Confidence 000 00000000100 112368999999999999999
Q ss_pred eCCCCCCHHHHHHHHhhcccC-CCceEEEcCeeCCCCCh-HHHhhcCeeecccc---cccc-ccchhccCCCC-------
Q 037346 966 RGRTGSGKSTLIQTLFRIVES-TAGHILIDGKDISLIGL-HDLRTRLSIIPQDP---TMFE-GTTRSNLDPLE------- 1032 (1156)
Q Consensus 966 ~G~SGsGKSTL~~lL~rl~~p-~~G~I~idG~di~~i~~-~~LR~~i~~VpQdp---~LF~-gTIr~Nl~~~~------- 1032 (1156)
.|+||||||||+++|+|+++| ++|+|.++|.++...+. ..+|+++++|||++ .+|. -|+++|+.+..
T Consensus 292 ~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~ 371 (500)
T TIGR02633 292 AGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFK 371 (500)
T ss_pred eCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccC
Confidence 999999999999999999995 89999999999875443 56788999999997 3665 59999997521
Q ss_pred -CCC----HHHHHHHHHHcCCCh-HHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc-
Q 037346 1033 -EHA----DEQIWEALDKCQLGD-EVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF- 1098 (1156)
Q Consensus 1033 -~~~----deei~~al~~~~l~~-~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~- 1098 (1156)
... .+++.+++++.++.+ .....+..|..+ ||||+++|++|||||||++||+.+.+.+.+.|+++.
T Consensus 372 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~ 451 (500)
T TIGR02633 372 MRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQ 451 (500)
T ss_pred CcCCHHHHHHHHHHHHHhcCccCCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHh
Confidence 111 245788999999963 445555555544 899999999999999999999999999999988764
Q ss_pred CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHH
Q 037346 1099 SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKL 1136 (1156)
Q Consensus 1099 ~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eL 1136 (1156)
++.|||+|||+++.+.. ||+|++|++|+|+..++.+++
T Consensus 452 ~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 452 EGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred CCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 47899999999998865 999999999999987765443
No 69
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.9e-57 Score=601.74 Aligned_cols=444 Identities=19% Similarity=0.198 Sum_probs=324.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH---H----HH-HHH---HHHH---HHHHHHHHHH
Q 037346 135 VQQFGIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER---A----LL-ILY---KKLG---LASIATLLAT 200 (1156)
Q Consensus 135 ~~~~~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~---~----~~-ll~---~~lg---~~~l~~~~~~ 200 (1156)
..+.+.+.-..++..+|+++++.+...++++++|+++|++++|++. . +. ++. ..++ ..+......+
T Consensus 974 ~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~ 1053 (1495)
T PLN03232 974 LISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISL 1053 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888888999999999999999999999999999999987 0 00 000 0000 0000000000
Q ss_pred HHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH--HHHHH---HHHHHHH-HH
Q 037346 201 AIVMLANF-------PLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKKNE--TAWLK---KSVYTEA-MI 267 (1156)
Q Consensus 201 ~~~~~~~~-------~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~~e--~~~~~---~~~~~~~-~~ 267 (1156)
++++++.. ...+..+..++.....+....+..+|.++|+++||.|++|.|-.+ .+... +..+... ..
T Consensus 1054 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1133 (1495)
T PLN03232 1054 WAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSSN 1133 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111111 111111223333333444456788999999999999999822111 11111 1111110 00
Q ss_pred HHHHHHH-HHHHHHHHH-HHHHHh-CCCcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 037346 268 SFFCWGA-PTFVSVVTF-GSCILL-GIPLE-----SGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLE 339 (1156)
Q Consensus 268 ~~~~~~~-~~~~~~~~f-~~~~~~-~~~lt-----~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~ 339 (1156)
..+.... .....++++ +.+.+. .+.+. ++.+..++++...+..|+..+...+..+..+.+|.+||.++++.+
T Consensus 1134 ~wl~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~ 1213 (1495)
T PLN03232 1134 RWLTIRLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLP 1213 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0000000 011111122 222222 22221 223333556666778899999999999999999999999999876
Q ss_pred CCCccc-cccCCC--CCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcE
Q 037346 340 GLQTDV-LEKMPR--GNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGI 416 (1156)
Q Consensus 340 ~~~~~~-~~~~~~--~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~ 416 (1156)
++.+.. ....+. .+..+.|+|+|++|+|+.+ .+++|+|+||+|++||.+||||+||||||||+++|+|+++|++|+
T Consensus 1214 ~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1292 (1495)
T PLN03232 1214 SEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGR 1292 (1495)
T ss_pred ccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCce
Confidence 432211 011111 1234579999999999632 357999999999999999999999999999999999999999999
Q ss_pred EEEcCe-------------EEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCC
Q 037346 417 IRLCGT-------------KAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINL 483 (1156)
Q Consensus 417 i~~~g~-------------~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~L 483 (1156)
|.+||. ++||||+|.+|++||||||.++.++++++..++++.+++.+++..+|+|++|.+|++|.+|
T Consensus 1293 I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~L 1372 (1495)
T PLN03232 1293 IMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENF 1372 (1495)
T ss_pred EEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCC
Confidence 999993 6999999999999999999998888999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccC
Q 037346 484 SGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGK 562 (1156)
Q Consensus 484 SgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~ 562 (1156)
|||||||++|||||+++|+|+|||||||+||+++++.|.+.+.. .+++|+|+||||++++..||+|++|++|+|++.|+
T Consensus 1373 SgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt 1452 (1495)
T PLN03232 1373 SVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDS 1452 (1495)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999988776654 47899999999999999999999999999999999
Q ss_pred hHHHHhcCc-chHHHHHh
Q 037346 563 YSDILNSGT-DFMELVGA 579 (1156)
Q Consensus 563 ~~~l~~~~~-~~~~~~~~ 579 (1156)
|++++++++ .|.++++.
T Consensus 1453 ~~eLl~~~~~~f~~l~~~ 1470 (1495)
T PLN03232 1453 PQELLSRDTSAFFRMVHS 1470 (1495)
T ss_pred HHHHHhCCCCHHHHHHHH
Confidence 999998764 78888754
No 70
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.1e-57 Score=561.69 Aligned_cols=428 Identities=20% Similarity=0.289 Sum_probs=338.8
Q ss_pred HHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 715 KTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLI 794 (1156)
Q Consensus 715 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 794 (1156)
+....++.+++++++++|++||+++++|++++|++ .|+..+...+...+..++..++.+++.+++++.++|.+++
T Consensus 86 ~~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~-----~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 160 (585)
T TIGR01192 86 GRRATLLTEAFGRIISMPLSWHQQRGTSNALHTLL-----RATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSI 160 (585)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445667999999999999999999999999999 6666665555555666666667777777888889999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037346 795 VFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAME 874 (1156)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (1156)
+++.+++++.++...+.+..++..+......+...+++.|+++|+++||+|+.++.+.+++.+..++..+..+.......
T Consensus 161 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (585)
T TIGR01192 161 VLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWA 240 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777777777777777777777777888899999999999999999999999999998888877665554433333
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHH---------------------HcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCc
Q 037346 875 WLRFCIDMLSSITFAF---SLAFLI---------------------SVPNGIIHPYKNLERKIISVERILQCACIPSEPA 930 (1156)
Q Consensus 875 ~~~~~l~~~~~~~~~~---~~~~~~---------------------~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~ 930 (1156)
+......++..+...+ .....+ .+.........++.....+.+|+.++.+.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 320 (585)
T TIGR01192 241 LASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQRE 320 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 2222222211111110 000000 0001111112455667788899998876554321
Q ss_pred ccccCCCCCCCCC-CCCeEEEEEEEEEEcCC--------------CCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcC
Q 037346 931 LVIEATKPNNSRP-SHGEVNIRHLQVRYAPN--------------LPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDG 995 (1156)
Q Consensus 931 ~~~~~~~~~~~~p-~~g~I~~~~Vsf~Y~~~--------------~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG 995 (1156)
. ...+ ..++ ..+.++|+||+|+|+++ +.++|+|+||||||||+++|+|+++|++|+|.+||
T Consensus 321 ~---~~~~-~~~~~~~~~i~~~~v~~~y~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g 396 (585)
T TIGR01192 321 E---PADA-PELPNVKGAVEFRHITFEFANSSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDG 396 (585)
T ss_pred C---CccC-CCCCCCCCeEEEEEEEEECCCCCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECC
Confidence 1 0111 1111 24679999999999643 23467799999999999999999999999999999
Q ss_pred eeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc------------
Q 037346 996 KDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------ 1062 (1156)
Q Consensus 996 ~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~------------ 1062 (1156)
+|+++++.+++|+++++|||||.+|++|+||||.++. +.+|+++++|++.+++++++.++|+|+++.
T Consensus 397 ~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq 476 (585)
T TIGR01192 397 IDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGE 476 (585)
T ss_pred EEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHH
Confidence 9999999999999999999999999999999998874 467999999999999999999999999864
Q ss_pred ------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHH
Q 037346 1063 ------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKL 1136 (1156)
Q Consensus 1063 ------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eL 1136 (1156)
||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 477 ~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 556 (585)
T TIGR01192 477 RQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQEL 556 (585)
T ss_pred HHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 89999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hcCCCChHHHHHHHHh
Q 037346 1137 LENKSSSFAQLVAEYT 1152 (1156)
Q Consensus 1137 l~~~~g~f~~l~~~~~ 1152 (1156)
+++ +|.|++|++.+.
T Consensus 557 ~~~-~~~y~~l~~~~~ 571 (585)
T TIGR01192 557 IQK-DGRFYKLLRRSG 571 (585)
T ss_pred HHC-CChHHHHHHhCc
Confidence 975 789999998653
No 71
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.2e-58 Score=516.02 Aligned_cols=431 Identities=19% Similarity=0.344 Sum_probs=309.2
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSL-VAW 790 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~ 790 (1156)
...++.+....+.|++++++.++||.+..+|.+.+++. .-...+...+...+..++..++.+......+.+ ..+
T Consensus 101 v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~id-----RgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga 175 (591)
T KOG0057|consen 101 VAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIID-----RGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGA 175 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHH-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 45677788888999999999999999999999988887 333333333333333333333222222211111 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHH
Q 037346 791 QVLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIA 870 (1156)
Q Consensus 791 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 870 (1156)
.++++++..+..|..+.....+.....++....+.......+.|++.+-.+||+||.|++..++|...+..+.++.....
T Consensus 176 ~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~ 255 (591)
T KOG0057|consen 176 AFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYS 255 (591)
T ss_pred HHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHH
Confidence 33333333333332222222222223334444556667788999999999999999999999999999999888777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCccch-----------------------HHHHHHHhHHHHHHHHhhcCC
Q 037346 871 GAMEWLRFCIDMLSSITFAFSLAFLIS-VPNGIIHP-----------------------YKNLERKIISVERILQCACIP 926 (1156)
Q Consensus 871 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~-----------------------~~~~~~~~~s~~Ri~~~~~~~ 926 (1156)
.....+.+.-..+.......+..+... ...+.... +.++..++.-.+-+... .+
T Consensus 256 ~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l--~~ 333 (591)
T KOG0057|consen 256 SSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFIL--LE 333 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhh--hh
Confidence 655555444433332222221111110 00100000 01222222222211111 11
Q ss_pred CCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCC--------------CceeeCCCCCCHHHHHHHHhhcccCCCceEE
Q 037346 927 SEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNL--------------PLVLRGRTGSGKSTLIQTLFRIVESTAGHIL 992 (1156)
Q Consensus 927 ~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~--------------~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~ 992 (1156)
.+. ..... +.+.....|.|+|+||+|.|.|+. +++++|+|||||||++++|+||+| ++|+|+
T Consensus 334 ~~~--~i~~~-~~~i~~~~~~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~ 409 (591)
T KOG0057|consen 334 VDE--DIQEA-ALPIELFGGSIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSIL 409 (591)
T ss_pred hhh--hhhhc-cCCcccCCCcEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEE
Confidence 111 11111 112223457899999999997654 356779999999999999999999 999999
Q ss_pred EcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc---------
Q 037346 993 IDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ--------- 1062 (1156)
Q Consensus 993 idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~--------- 1062 (1156)
|||+||++++++.+|+.||+||||..||++||-+||.++++ .++||+.++||++++||.+.++|+||+|.
T Consensus 410 IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LS 489 (591)
T KOG0057|consen 410 IDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLS 489 (591)
T ss_pred ECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccc
Confidence 99999999999999999999999999999999999999875 57999999999999999999999999976
Q ss_pred ---------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecCh
Q 037346 1063 ---------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSP 1133 (1156)
Q Consensus 1063 ---------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~ 1133 (1156)
|||+||+|+|+++|||||+||.+||+.|.+.|.....++|+|+|+||++++++||+|+|||+|+|+|.|+|
T Consensus 490 GGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth 569 (591)
T KOG0057|consen 490 GGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTH 569 (591)
T ss_pred cchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccH
Confidence 79999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred hHHhcCCCChHHHHHHHHhcc
Q 037346 1134 TKLLENKSSSFAQLVAEYTSS 1154 (1156)
Q Consensus 1134 ~eLl~~~~g~f~~l~~~~~~~ 1154 (1156)
+||++ +.+.|+.+|..+...
T Consensus 570 ~ell~-~s~~~~~~w~~~~~~ 589 (591)
T KOG0057|consen 570 SELLA-PSELYADLWTTQTSS 589 (591)
T ss_pred HHHhh-hhhHHHHHhcccccc
Confidence 99998 688999999876543
No 72
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.6e-57 Score=559.52 Aligned_cols=431 Identities=19% Similarity=0.287 Sum_probs=338.5
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVM-SLVAW 790 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~ 790 (1156)
.+.+...++|.++++++++.|++||+++++|++++|++ .|+..+.......+..++..++..++.++++ +.++|
T Consensus 63 ~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~-----~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (569)
T PRK10789 63 ASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARAT-----NDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISW 137 (569)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 46788889999999999999999999999999999999 6666665444444555555545545554444 47888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHH
Q 037346 791 QVLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIA 870 (1156)
Q Consensus 791 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 870 (1156)
+++++++..+++.+++...+.+..++..+......+.+.+.+.|+++|+++||+|+.|+.+.+++.+..++..+......
T Consensus 138 ~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 217 (569)
T PRK10789 138 QLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVA 217 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777666666666666666666666666666677889999999999999999999999999999998887766665544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HH---------------------HHHcCCCccchHHHHHHHhHHHHHHHHhhcCC
Q 037346 871 GAMEWLRFCIDMLSSITFAFSL---AF---------------------LISVPNGIIHPYKNLERKIISVERILQCACIP 926 (1156)
Q Consensus 871 ~~~~~~~~~l~~~~~~~~~~~~---~~---------------------~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~ 926 (1156)
....+..........+...+.+ .+ +..+..........+.....+.+|+.++.+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~ 297 (569)
T PRK10789 218 RIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEA 297 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4333332222221111110000 00 00001111112256777888999999998765
Q ss_pred CCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCC---------------CceeeCCCCCCHHHHHHHHhhcccCCCceE
Q 037346 927 SEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNL---------------PLVLRGRTGSGKSTLIQTLFRIVESTAGHI 991 (1156)
Q Consensus 927 ~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~---------------~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I 991 (1156)
++... .... ..+..+.|+|+||+|+|+.+. .++|+|+||||||||+++|+|+|+|++|+|
T Consensus 298 ~~~~~---~~~~--~~~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i 372 (569)
T PRK10789 298 PVVKD---GSEP--VPEGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDI 372 (569)
T ss_pred CcccC---CCCC--CCCCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEE
Confidence 44321 1000 112346799999999996432 245669999999999999999999999999
Q ss_pred EEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc--------
Q 037346 992 LIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------- 1062 (1156)
Q Consensus 992 ~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~-------- 1062 (1156)
.+||+|+++++.+++|+++++|||+|++|+|||||||.++. +.+|+++++|++.+++++++.++|+|+++.
T Consensus 373 ~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~L 452 (569)
T PRK10789 373 RFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVML 452 (569)
T ss_pred EECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcC
Confidence 99999999999999999999999999999999999999874 578999999999999999999999999974
Q ss_pred ----------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecC
Q 037346 1063 ----------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1063 ----------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~ 1132 (1156)
|||++++|+|||||||||+||+++++.|.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+
T Consensus 453 SgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~ 532 (569)
T PRK10789 453 SGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGN 532 (569)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecC
Confidence 8999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhHHhcCCCChHHHHHHHHhc
Q 037346 1133 PTKLLENKSSSFAQLVAEYTS 1153 (1156)
Q Consensus 1133 ~~eLl~~~~g~f~~l~~~~~~ 1153 (1156)
|++|+++ +|.|++|++.++.
T Consensus 533 ~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 533 HDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred HHHHHHc-CChHHHHHHHhhh
Confidence 9999975 6899999986543
No 73
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3.6e-57 Score=560.50 Aligned_cols=432 Identities=20% Similarity=0.295 Sum_probs=348.4
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+....+|..+++++++.|..+|++.++|++++|++ .|...++......+..++..++.+++.+++++.++|+
T Consensus 85 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~-----~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (576)
T TIGR02204 85 LGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLT-----TDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPK 159 (576)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 45577889999999999999999999999999999999 7777777766667777777788888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++..+++.+++..++.+..+...+......+...+++.|.++|+++||+++.++++.+++.+..++..+...+...
T Consensus 160 l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (576)
T TIGR02204 160 LTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIR 239 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87766655555555555566666677777777788899999999999999999999999999999988887776665555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HH---------------------HcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSITFAFSLAF---LI---------------------SVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~~~~---~~---------------------~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
...|+......+..+..++...+ .+ .+.........++.....+++|+.++.+.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~ 319 (576)
T TIGR02204 240 TRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEP 319 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 44444443332221111111100 00 0001111223567778889999999987655
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcCC----------------CCceeeCCCCCCHHHHHHHHhhcccCCCceE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAPN----------------LPLVLRGRTGSGKSTLIQTLFRIVESTAGHI 991 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~----------------~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I 991 (1156)
+.+... ......++..+.|+|+||+|+|+++ +.+++.|+||||||||+++|+|+|+|++|+|
T Consensus 320 ~~~~~~--~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I 397 (576)
T TIGR02204 320 DIKAPA--HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRI 397 (576)
T ss_pred cCCCCC--CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE
Confidence 422110 0111123345679999999999642 2245669999999999999999999999999
Q ss_pred EEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc--------
Q 037346 992 LIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------- 1062 (1156)
Q Consensus 992 ~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~-------- 1062 (1156)
++||+|+++++.+++|++|+|+||||++|+|||||||.++++ .+|++++++|+++++.+++.++|+|+++.
T Consensus 398 ~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~L 477 (576)
T TIGR02204 398 LLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTL 477 (576)
T ss_pred EECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcC
Confidence 999999999999999999999999999999999999998654 67899999999999999999999999865
Q ss_pred ----------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecC
Q 037346 1063 ----------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1063 ----------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~ 1132 (1156)
|||++++|+|||||||||+||++|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+
T Consensus 478 SgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~ 557 (576)
T TIGR02204 478 SGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGT 557 (576)
T ss_pred CHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeec
Confidence 8999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhHHhcCCCChHHHHHHHH
Q 037346 1133 PTKLLENKSSSFAQLVAEY 1151 (1156)
Q Consensus 1133 ~~eLl~~~~g~f~~l~~~~ 1151 (1156)
|++|++ +++.|++|++.+
T Consensus 558 ~~~l~~-~~~~~~~l~~~~ 575 (576)
T TIGR02204 558 HAELIA-KGGLYARLARLQ 575 (576)
T ss_pred HHHHHH-cCChHHHHHhhc
Confidence 999997 478999998754
No 74
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.2e-58 Score=561.02 Aligned_cols=431 Identities=19% Similarity=0.258 Sum_probs=321.0
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.|+++|+++.|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLS---DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcC---CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 489999999996 346999999999999999999999999999999999999999999998762 5
Q ss_pred EEEecCCcC---------CCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 424 AYVAQSPWI---------QSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 424 ~~v~Q~~~~---------~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+|++|++.. +..|++||+.++.. ++++.+++++.+++.+..+ ....+||||||||++||
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALLD-----------RRFKYLSTGETRKTLLC 147 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhhh-----------CCcccCCHHHHHHHHHH
Confidence 899998743 13589999876532 3456777888888765433 34568999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhcCc
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNSGT 571 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~~ 571 (1156)
|||+.+|++|||||||++||+.+.+++.+.+.. .+|+|+|++||+++.+. .||+|++|++|+++..|+++++.....
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 227 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQAL 227 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcchh
Confidence 999999999999999999999999998887644 35789999999999886 499999999999999888776543100
Q ss_pred chHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCcccHHH
Q 037346 572 DFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGKVGFSV 651 (1156)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~~~~~ 651 (1156)
...+... .. . .. .. . +.. .+
T Consensus 228 -~~~~~~~--~~---~----------------~~---------------~~--~------~~~----~~----------- 247 (490)
T PRK10938 228 -VAQLAHS--EQ---L----------------EG---------------VQ--L------PEP----DE----------- 247 (490)
T ss_pred -hhhhhhh--hc---c----------------Cc---------------cc--c------Ccc----cc-----------
Confidence 0000000 00 0 00 00 0 000 00
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 037346 652 YWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNKMHVCIFRA 731 (1156)
Q Consensus 652 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~ 731 (1156)
T Consensus 248 -------------------------------------------------------------------------------- 247 (490)
T PRK10938 248 -------------------------------------------------------------------------------- 247 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 732 PMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYI 811 (1156)
Q Consensus 732 p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~ 811 (1156)
| ... ..
T Consensus 248 ~--------------~~~-----~~------------------------------------------------------- 253 (490)
T PRK10938 248 P--------------SAR-----HA------------------------------------------------------- 253 (490)
T ss_pred c--------------ccc-----cc-------------------------------------------------------
Confidence 0 000 00
Q ss_pred HHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 812 TSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSITFAFS 891 (1156)
Q Consensus 812 ~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 891 (1156)
T Consensus 254 -------------------------------------------------------------------------------- 253 (490)
T PRK10938 254 -------------------------------------------------------------------------------- 253 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCCceeeCCCCC
Q 037346 892 LAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLPLVLRGRTGS 971 (1156)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~~vL~G~SGs 971 (1156)
.. ...+.. +.......++ +...++|++|..++++.++|.|+|||
T Consensus 254 ------~~--------------------------~~~~~l--~~~~l~~~~~--~~~il~~vsl~i~~Ge~~~i~G~NGs 297 (490)
T PRK10938 254 ------LP--------------------------ANEPRI--VLNNGVVSYN--DRPILHNLSWQVNPGEHWQIVGPNGA 297 (490)
T ss_pred ------cC--------------------------CCCceE--EEeceEEEEC--CeeEEeeceEEEcCCCEEEEECCCCC
Confidence 00 000000 0000011111 23478999999999999999999999
Q ss_pred CHHHHHHHHhhcccC-CCceEEEcCeeCCC-CChHHHhhcCeeecccccccc---ccchhccCCC--C------CCC---
Q 037346 972 GKSTLIQTLFRIVES-TAGHILIDGKDISL-IGLHDLRTRLSIIPQDPTMFE---GTTRSNLDPL--E------EHA--- 1035 (1156)
Q Consensus 972 GKSTL~~lL~rl~~p-~~G~I~idG~di~~-i~~~~LR~~i~~VpQdp~LF~---gTIr~Nl~~~--~------~~~--- 1035 (1156)
|||||+++|+|+.+| ++|+|.++|.++.. .+....|++++++||++.++. .|+++++... . ...
T Consensus 298 GKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (490)
T PRK10938 298 GKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQ 377 (490)
T ss_pred CHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHH
Confidence 999999999998875 69999999987632 234457889999999987643 3677765321 0 111
Q ss_pred HHHHHHHHHHcCCCh-HHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcC-C-ceEEE
Q 037346 1036 DEQIWEALDKCQLGD-EVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFS-D-CTVVT 1105 (1156)
Q Consensus 1036 deei~~al~~~~l~~-~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~-~-~TvI~ 1105 (1156)
++++.++++.+++.+ .....|..|..+ ||||+++|+||||||||++||+++.+.+.+.|+++.+ + .|||+
T Consensus 378 ~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tvii 457 (490)
T PRK10938 378 QKLAQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLF 457 (490)
T ss_pred HHHHHHHHHHcCCchhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 346889999999986 655555666544 8999999999999999999999999999999998753 3 47999
Q ss_pred eecCcccccc--cCEEEEEeCcEEeeecC
Q 037346 1106 IAHRITSVLD--SAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1106 IaHrl~ti~~--~D~I~Vl~~G~IvE~G~ 1132 (1156)
|||+++.+.. ||+|++|++|+|++.-+
T Consensus 458 vsHd~~~~~~~~~d~v~~l~~G~i~~~~~ 486 (490)
T PRK10938 458 VSHHAEDAPACITHRLEFVPDGDIYRYVQ 486 (490)
T ss_pred EecchhhhhhhhheeEEEecCCceEEeec
Confidence 9999999974 79999999999987543
No 75
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3.8e-56 Score=545.28 Aligned_cols=481 Identities=18% Similarity=0.140 Sum_probs=349.3
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-cc-c-hhhHH--HHHHHHHHHHHHHHHHHHHHHH
Q 037346 73 KVLFF-SAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQA-FE-Y-EGYVL--CLSERHWFFQVQQFGIRFRATL 146 (1156)
Q Consensus 73 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~-~~-~-~g~~l--~~~~~~~~~~~~~~~~~~r~~l 146 (1156)
..+++ .+++.+++++++.++..++..+.|++++.+++....... .. + .++++ .++.....+...+.+.++...+
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 88 (555)
T TIGR01194 9 LALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLGQGSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANL 88 (555)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667 788889999999999999999999999988874211110 00 0 11111 2222233344577888999999
Q ss_pred HHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 147 FAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAERA--------------------LLILYKKLGLASIATLLATAIVMLA 206 (1156)
Q Consensus 147 ~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~~--------------------~~ll~~~lg~~~l~~~~~~~~~~~~ 206 (1156)
+..+|+|+++++...+++.++|++++++++|++.. ++++++.-...+++.++++++.+++
T Consensus 89 R~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~ 168 (555)
T TIGR01194 89 RIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAA 168 (555)
T ss_pred HHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999889999999999999999870 0011100001111111111222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 207 NFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKK-------NETAWLKKSVYTEAMISFFCWGAPTFVS 279 (1156)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~-------~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (1156)
..+..+...+...+..+..++..+.+.|.+.|+++||.|+.+... ......++.................++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (555)
T TIGR01194 169 QLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLF 248 (555)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233344455556666677778889999999999999999984111 0111111111111111100001111111
Q ss_pred HHHHHHHHHh---CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC---cccc--ccC--
Q 037346 280 VVTFGSCILL---GIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQ---TDVL--EKM-- 349 (1156)
Q Consensus 280 ~~~f~~~~~~---~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~---~~~~--~~~-- 349 (1156)
.+.++.+++. .+.++.|.+++++.+...+..|+..+...+..+.++++|++||.++++.++.+ .... ...
T Consensus 249 ~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~ 328 (555)
T TIGR01194 249 FLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLL 328 (555)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccc
Confidence 1122222221 25789999999999999999999999999999999999999999998642111 0000 000
Q ss_pred -CCCCCCccEEEeeeEEEeCCCC--CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe----
Q 037346 350 -PRGNSDTAIEIIDGSFSWDFSS--PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT---- 422 (1156)
Q Consensus 350 -~~~~~~~~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~---- 422 (1156)
+.......|+++|++|+|+..+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 329 ~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~ 408 (555)
T TIGR01194 329 LAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSA 408 (555)
T ss_pred cccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCC
Confidence 1111234699999999997421 236999999999999999999999999999999999999999999999983
Q ss_pred ---------EEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 ---------KAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 ---------~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++||+|+|++|++|+++|+ ..+.++++.+++++.+++.+++..+|+|++|. .+||||||||++|
T Consensus 409 ~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlal 481 (555)
T TIGR01194 409 DSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLAL 481 (555)
T ss_pred CCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHH
Confidence 5899999999999999995 33456778889999999999999999999984 7899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEeCCeEEEc
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIKDGKITQA 560 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~ 560 (1156)
|||++++|+++|||||||+||+++++.+.+.++. .+++|+|+|||+++.+..||+|++|++|++++.
T Consensus 482 aRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 482 ICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999998876532 468999999999999889999999999999864
No 76
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3.8e-58 Score=495.33 Aligned_cols=456 Identities=24% Similarity=0.385 Sum_probs=341.4
Q ss_pred ccEEEeeeEEEeCCC-CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC--------
Q 037346 356 TAIEIIDGSFSWDFS-SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG-------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~-~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g-------- 421 (1156)
..++++|++.+|... ....+++++||+|++||.+|+||+||||||-..+.|+|+++. -+|+|.++|
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 458899998887643 245789999999999999999999999999999999999985 368999988
Q ss_pred ---------eEEEEecCCcC-CC--ccHHHH----hhcCCC----CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCC
Q 037346 422 ---------TKAYVAQSPWI-QS--GKIEEN----ILFGKE----MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGI 481 (1156)
Q Consensus 422 ---------~~~~v~Q~~~~-~~--~ti~en----i~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~ 481 (1156)
+|++++|+|.- .| .||..- |...+. ..+++..+.++.+++.+--.. +...+.
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~r--------l~~yPH 156 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKR--------LDAYPH 156 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhh--------hhhCCc
Confidence 47999999963 22 355444 444332 234566778888888653221 234457
Q ss_pred CCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCCeE
Q 037346 482 NLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDGKI 557 (1156)
Q Consensus 482 ~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i 557 (1156)
+|||||||||.||.||..+|++||-||||.|||..++.+|.+.+.. ..|..+++||||+..++. ||+|+||.+|++
T Consensus 157 eLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~i 236 (534)
T COG4172 157 ELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEI 236 (534)
T ss_pred ccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEE
Confidence 9999999999999999999999999999999999999999886633 558999999999999975 999999999999
Q ss_pred EEccChHHHHhcCc-chHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcc
Q 037346 558 TQAGKYSDILNSGT-DFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQL 636 (1156)
Q Consensus 558 ~~~g~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (1156)
+|.|+.++++.... .|...+-.. . |........ + .. + .+
T Consensus 237 vE~~~t~~lF~~PqHpYTr~Ll~a------e------P~g~~~p~~--~------------------~~------~--~l 276 (534)
T COG4172 237 VETGTTETLFAAPQHPYTRKLLAA------E------PSGDPPPLP--E------------------DA------P--VL 276 (534)
T ss_pred eecCcHHHHhhCCCChHHHHHHhc------C------CCCCCCCCC--C------------------CC------C--ce
Confidence 99999999886543 233222110 0 000000000 0 00 0 00
Q ss_pred hhHHHHhcCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHH
Q 037346 637 VQEEEREKGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKT 716 (1156)
Q Consensus 637 ~~~e~~~~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1156)
.+-
T Consensus 277 l~~----------------------------------------------------------------------------- 279 (534)
T COG4172 277 LEV----------------------------------------------------------------------------- 279 (534)
T ss_pred EEe-----------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 717 ATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVF 796 (1156)
Q Consensus 717 ~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 796 (1156)
.|+. ++. |
T Consensus 280 --------------------------------------~~v~-v~f--~------------------------------- 287 (534)
T COG4172 280 --------------------------------------EDLR-VWF--P------------------------------- 287 (534)
T ss_pred --------------------------------------cceE-EEE--e-------------------------------
Confidence 0000 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 037346 797 VPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWL 876 (1156)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (1156)
T Consensus 288 -------------------------------------------------------------------------------- 287 (534)
T COG4172 288 -------------------------------------------------------------------------------- 287 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEE
Q 037346 877 RFCIDMLSSITFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVR 956 (1156)
Q Consensus 877 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~ 956 (1156)
...+++ .+....-..+++||++
T Consensus 288 ---------------------i~~g~~-------------------------------------~r~~~~~~AVd~isl~ 309 (534)
T COG4172 288 ---------------------IKGGFL-------------------------------------RRTVDHLRAVDGISLT 309 (534)
T ss_pred ---------------------cCCccc-------------------------------------cccchheEEeccceeE
Confidence 000000 0000113478999999
Q ss_pred EcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHH---HhhcCeeecccccc-c--cccchhcc--
Q 037346 957 YAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHD---LRTRLSIIPQDPTM-F--EGTTRSNL-- 1028 (1156)
Q Consensus 957 Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---LR~~i~~VpQdp~L-F--~gTIr~Nl-- 1028 (1156)
.++++.+.|+|+||||||||-.+|+|+.++. |+|.++|.||...+.++ +|+++-+|+|||+= + .-||.+=|
T Consensus 310 L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~E 388 (534)
T COG4172 310 LRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEE 388 (534)
T ss_pred ecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhh
Confidence 9999999999999999999999999999875 99999999999988666 67999999999971 1 12444333
Q ss_pred --CCCC-CCC----HHHHHHHHHHcCCChHHHh-hcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHH
Q 037346 1029 --DPLE-EHA----DEQIWEALDKCQLGDEVRK-KKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQT 1093 (1156)
Q Consensus 1029 --~~~~-~~~----deei~~al~~~~l~~~i~~-lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~ 1093 (1156)
.... ..+ |+.+.+||+.+||+..... -|..+.-+ |||++-+|++++||||||+||.--.+.|.+.
T Consensus 389 GL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~L 468 (534)
T COG4172 389 GLRVHEPKLSAAERDQRVIEALEEVGLDPATRNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDL 468 (534)
T ss_pred hhhhcCCCCCHHHHHHHHHHHHHHcCCChhHhhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHH
Confidence 2222 122 5679999999999876543 45555433 8999999999999999999999999999999
Q ss_pred HHHhc--CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHHHH
Q 037346 1094 LRQHF--SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFAQL 1147 (1156)
Q Consensus 1094 l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l 1147 (1156)
++++- .+-+-++|+|+|..++. ||+|+||.+|+|||+|+-+++++++...|.+-
T Consensus 469 Lr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 469 LRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred HHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 98764 36699999999999986 99999999999999999999999998888753
No 77
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-58 Score=559.06 Aligned_cols=423 Identities=23% Similarity=0.345 Sum_probs=317.2
Q ss_pred EeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------EEE
Q 037346 360 IIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------KAY 425 (1156)
Q Consensus 360 ~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------~~~ 425 (1156)
++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+ ++|
T Consensus 1 ~~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 368999996 357999999999999999999999999999999999999999999999873 789
Q ss_pred EecCCcCCC-ccHHHHhhcCCC------CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 426 VAQSPWIQS-GKIEENILFGKE------MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 426 v~Q~~~~~~-~ti~eni~~~~~------~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
++|++.++. .|++||+.++.. .+. ++.+++++.+++... ......+|||||||||+||
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq~qrv~lA 146 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDID-----------PRAKVATLSVSQMQMIEIA 146 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCC-----------ccCchhhCCHHHHHHHHHH
Confidence 999997654 599999987631 121 233445555555322 2345678999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhcCc
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNSGT 571 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~~ 571 (1156)
|||+.+|+++||||||++||+.+.+++.+.+.. ..|+|+|++||+++.+. .||+|++|++|++++.|+.+++...
T Consensus 147 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 224 (491)
T PRK10982 147 KAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD-- 224 (491)
T ss_pred HHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH--
Confidence 999999999999999999999999999876643 45889999999999876 5999999999999988765443100
Q ss_pred chHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCcccHHH
Q 037346 572 DFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGKVGFSV 651 (1156)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~~~~~~ 651 (1156)
+...... .. . . . .
T Consensus 225 ---~~~~~~~----~~-~--~------------~---------------~------------------------------ 237 (491)
T PRK10982 225 ---KIIAMMV----GR-S--L------------T---------------Q------------------------------ 237 (491)
T ss_pred ---HHHHHHh----CC-C--c------------c---------------c------------------------------
Confidence 0000000 00 0 0 0 0
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 037346 652 YWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNKMHVCIFRA 731 (1156)
Q Consensus 652 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~ 731 (1156)
T Consensus 238 -------------------------------------------------------------------------------- 237 (491)
T PRK10982 238 -------------------------------------------------------------------------------- 237 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 732 PMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWYQQYYI 811 (1156)
Q Consensus 732 p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~ 811 (1156)
.+.. + . .
T Consensus 238 ---~~~~-~--------~-----~-------------------------------------------------------- 244 (491)
T PRK10982 238 ---RFPD-K--------E-----N-------------------------------------------------------- 244 (491)
T ss_pred ---cccc-c--------c-----C--------------------------------------------------------
Confidence 0000 0 0 0
Q ss_pred HHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 812 TSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSITFAFS 891 (1156)
Q Consensus 812 ~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 891 (1156)
T Consensus 245 -------------------------------------------------------------------------------- 244 (491)
T PRK10982 245 -------------------------------------------------------------------------------- 244 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCCceeeCCCCC
Q 037346 892 LAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLPLVLRGRTGS 971 (1156)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~~vL~G~SGs 971 (1156)
.+.++.. +..+.... +...++||+|..++++.++|.|+|||
T Consensus 245 ---------------------------------~~~~~~i--~~~~l~~~----~~~~l~~vsl~i~~Ge~~~l~G~nGs 285 (491)
T PRK10982 245 ---------------------------------KPGEVIL--EVRNLTSL----RQPSIRDVSFDLHKGEILGIAGLVGA 285 (491)
T ss_pred ---------------------------------CCCCcEE--EEeCcccc----cCcccceeeEEEeCCcEEEEecCCCC
Confidence 0000000 00000000 01268999999999999999999999
Q ss_pred CHHHHHHHHhhcccCCCceEEEcCeeCCCCChH-HHhhcCeeeccccc---ccc-ccchhc-----cCCC----CCCC--
Q 037346 972 GKSTLIQTLFRIVESTAGHILIDGKDISLIGLH-DLRTRLSIIPQDPT---MFE-GTTRSN-----LDPL----EEHA-- 1035 (1156)
Q Consensus 972 GKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~-~LR~~i~~VpQdp~---LF~-gTIr~N-----l~~~----~~~~-- 1035 (1156)
|||||+++|+|+.+|++|+|.+||.++...+.. .+|+.++|+||++. +|. .|+++| +... ...+
T Consensus 286 GKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (491)
T PRK10982 286 KRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNS 365 (491)
T ss_pred CHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcH
Confidence 999999999999999999999999999877654 45778999999963 555 355555 4311 1011
Q ss_pred --HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc-CCceEE
Q 037346 1036 --DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF-SDCTVV 1104 (1156)
Q Consensus 1036 --deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI 1104 (1156)
++++.++++..++. +.....|..|..+ |||++++|+||||||||++||+.+.+.|.+.|+++. +++|||
T Consensus 366 ~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi 445 (491)
T PRK10982 366 RMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGII 445 (491)
T ss_pred HHHHHHHHHHHhcCccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEE
Confidence 24567888888884 4445555555544 899999999999999999999999999999998754 478999
Q ss_pred EeecCccccc-ccCEEEEEeCcEEeeecChhHHh
Q 037346 1105 TIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLL 1137 (1156)
Q Consensus 1105 ~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl 1137 (1156)
+|||+++.+. -||||++|++|+++..++.+++.
T Consensus 446 ~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 479 (491)
T PRK10982 446 IISSEMPELLGITDRILVMSNGLVAGIVDTKTTT 479 (491)
T ss_pred EECCChHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 9999999886 59999999999999888775433
No 78
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.6e-57 Score=553.79 Aligned_cols=198 Identities=27% Similarity=0.374 Sum_probs=163.0
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCC
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQ 433 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~ 433 (1156)
..++++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .++||+|+|.++
T Consensus 5 ~~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~ 82 (556)
T PRK11819 5 YIYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLD 82 (556)
T ss_pred EEEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCC
Confidence 36899999999962 35799999999999999999999999999999999999999999999874 689999999887
Q ss_pred Cc-cHHHHhhcCCC-C----------------C--------------------------HHHHHHHHHHhCCchhhhhCC
Q 037346 434 SG-KIEENILFGKE-M----------------D--------------------------RERYERVLEACSLKKDLEVLP 469 (1156)
Q Consensus 434 ~~-ti~eni~~~~~-~----------------~--------------------------~~~~~~~~~~~~l~~~~~~~~ 469 (1156)
+. |++||+.++.. + . +++..++++.+++.
T Consensus 83 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~------- 155 (556)
T PRK11819 83 PEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP------- 155 (556)
T ss_pred CCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC-------
Confidence 64 99999987521 0 0 01111222222221
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCcccc-CCE
Q 037346 470 FGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPA-ADL 548 (1156)
Q Consensus 470 ~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~-~d~ 548 (1156)
.......+|||||||||+||||++.+|+++||||||++||+.+..++.+.+.... .|+|+|||+++++.. ||+
T Consensus 156 -----~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~-~tviiisHd~~~~~~~~d~ 229 (556)
T PRK11819 156 -----PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP-GTVVAVTHDRYFLDNVAGW 229 (556)
T ss_pred -----cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC-CeEEEEeCCHHHHHhhcCe
Confidence 1245567899999999999999999999999999999999999999887654443 599999999999865 999
Q ss_pred EEEEeCCeEE-EccChHHHHh
Q 037346 549 ILVIKDGKIT-QAGKYSDILN 568 (1156)
Q Consensus 549 i~~l~~G~i~-~~g~~~~l~~ 568 (1156)
|++|++|+++ +.|+++++.+
T Consensus 230 i~~l~~g~i~~~~g~~~~~~~ 250 (556)
T PRK11819 230 ILELDRGRGIPWEGNYSSWLE 250 (556)
T ss_pred EEEEeCCEEEEecCCHHHHHH
Confidence 9999999986 7898887653
No 79
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=9.5e-57 Score=550.28 Aligned_cols=392 Identities=21% Similarity=0.260 Sum_probs=309.9
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.++..++|.++++++++.|..||+++++|++++|++ .|+..++..+...+..++..++.+++.+++++..+|.
T Consensus 80 ~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~-----~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 154 (529)
T TIGR02868 80 AALRSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLG-----ADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVP 154 (529)
T ss_pred HHHHHHHHHHHHHHHHhhccCccccccCChhhHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 34567789999999999999999999999999999999 7777777777777777788888888888889999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHH
Q 037346 792 VLIVFVPVIATFIWY-QQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIA 870 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 870 (1156)
++++++..++++.++ ..++.+..+...+...+..+.+.+++.|.++|+++||+|+.|+.+.+++.+..++..+......
T Consensus 155 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (529)
T TIGR02868 155 AALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAA 234 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 987766554444333 3344444455555556677889999999999999999999999999999998888877766655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCC-----------------------ccchHHHHHHHhHHHHHHHHhhcCC
Q 037346 871 GAMEWLRFCIDMLSSITFAFSLAFL-ISVPNG-----------------------IIHPYKNLERKIISVERILQCACIP 926 (1156)
Q Consensus 871 ~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~-----------------------~~~~~~~~~~~~~s~~Ri~~~~~~~ 926 (1156)
....+......++..+...++..+. .....+ .......+.....+.+|+.++.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~ 314 (529)
T TIGR02868 235 RATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAK 314 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5444443333333222211111110 000011 1112256677888999999998776
Q ss_pred CCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCC--------------CceeeCCCCCCHHHHHHHHhhcccCCCceEE
Q 037346 927 SEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNL--------------PLVLRGRTGSGKSTLIQTLFRIVESTAGHIL 992 (1156)
Q Consensus 927 ~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~--------------~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~ 992 (1156)
++.+.. +...+...++..+.|+|+||+|+|+++. .++|+||||||||||+++|+|+|+|++|+|.
T Consensus 315 ~~~~~~-~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~ 393 (529)
T TIGR02868 315 GPRPEG-VVPAAGALGLGKPTLELRDLSFGYPGSPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVT 393 (529)
T ss_pred CCcCCC-CCCCCcccCCCCceEEEEEEEEecCCCCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Confidence 553211 1111111234457899999999996432 3467799999999999999999999999999
Q ss_pred EcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc---------
Q 037346 993 IDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ--------- 1062 (1156)
Q Consensus 993 idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~--------- 1062 (1156)
+||+|++++ .+++|++|+||||||+||+|||||||.+++ +.+||++++|++.|++++++.++|+||||.
T Consensus 394 i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LS 472 (529)
T TIGR02868 394 LDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLS 472 (529)
T ss_pred ECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCC
Confidence 999999999 999999999999999999999999999975 468999999999999999999999999975
Q ss_pred ---------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCc
Q 037346 1063 ---------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRI 1110 (1156)
Q Consensus 1063 ---------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl 1110 (1156)
|||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 473 GGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 473 GGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 899999999999999999999999999999999988999999999996
No 80
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.5e-56 Score=548.35 Aligned_cols=206 Identities=26% Similarity=0.352 Sum_probs=166.7
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCCC
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQS 434 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~~ 434 (1156)
.++++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .++|++|+|+++.
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 81 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDP 81 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCC
Confidence 5899999999962 35799999999999999999999999999999999999999999999975 6999999998875
Q ss_pred -ccHHHHhhcCCC-------------------CC--------HHHHHHHHHHhCCch-------hhhhCCCCCccccccC
Q 037346 435 -GKIEENILFGKE-------------------MD--------RERYERVLEACSLKK-------DLEVLPFGDQTIIGER 479 (1156)
Q Consensus 435 -~ti~eni~~~~~-------------------~~--------~~~~~~~~~~~~l~~-------~~~~~~~g~~t~v~~~ 479 (1156)
.|++||+.++.. .+ ..++.++++.++..+ .++.+ |.. .....
T Consensus 82 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~-~~~~~ 158 (552)
T TIGR03719 82 TKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL--RCP-PWDAD 158 (552)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC--CCC-cccCc
Confidence 599999987531 01 012333444444321 12222 111 12456
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCcccc-CCEEEEEeCCeEE
Q 037346 480 GINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPA-ADLILVIKDGKIT 558 (1156)
Q Consensus 480 g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~ 558 (1156)
..+||||||||++||||++.+|++|||||||++||+.+.+++.+.+... +.|+|+|||+++.+.. ||+|++|++|+++
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~-~~tvIiisHd~~~~~~~~d~v~~l~~g~i~ 237 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY-PGTVVAVTHDRYFLDNVAGWILELDRGRGI 237 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCHHHHHhhcCeEEEEECCEEE
Confidence 7899999999999999999999999999999999999999988765444 4699999999999875 9999999999975
Q ss_pred -EccChHHHHh
Q 037346 559 -QAGKYSDILN 568 (1156)
Q Consensus 559 -~~g~~~~l~~ 568 (1156)
+.|+++++.+
T Consensus 238 ~~~g~~~~~~~ 248 (552)
T TIGR03719 238 PWEGNYSSWLE 248 (552)
T ss_pred EecCCHHHHHH
Confidence 7798887654
No 81
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2e-55 Score=489.15 Aligned_cols=490 Identities=22% Similarity=0.306 Sum_probs=375.5
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-hhhHH---------HHHHHHHHHHHHH
Q 037346 68 ALRLAKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAFEY-EGYVL---------CLSERHWFFQVQQ 137 (1156)
Q Consensus 68 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~~~-~g~~l---------~~~~~~~~~~~~~ 137 (1156)
......+....++..++..++++.+-.++.+..|+++-++-|-+....+... .++.+ .++...-.+...|
T Consensus 10 ~~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~R 89 (580)
T COG4618 10 PKNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVR 89 (580)
T ss_pred CCchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667777888889999999999999999999999998887765443221 11111 1111222234578
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHH
Q 037346 138 FGIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER------------------------ALLILYKKLGLAS 193 (1156)
Q Consensus 138 ~~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~------------------------~~~ll~~~lg~~~ 193 (1156)
++.++-..+...+|.-.++.+..........+.+ .|.+. .++++.-.+|+.+
T Consensus 90 ig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a 165 (580)
T COG4618 90 IGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIA 165 (580)
T ss_pred HHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888864443221111111222 23322 2234445667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHH----HHHHHHHHHH---HH
Q 037346 194 IATLLATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWE--LKKN----ETAWLKKSVY---TE 264 (1156)
Q Consensus 194 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e--~r~~----e~~~~~~~~~---~~ 264 (1156)
++|.++++++..++-.. .++-.++-.+..-+|....+-...|..+|+.+|.. .++. ..+++..... ..
T Consensus 166 ~~ga~iLv~la~ln~~~---t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~ 242 (580)
T COG4618 166 LAGAIILVVLALLNERA---TRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRN 242 (580)
T ss_pred HHHHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 77766655555555443 34444555667777888889999999999988865 1111 1112221111 11
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 037346 265 AMISFFCWGAP--TFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQ 342 (1156)
Q Consensus 265 ~~~~~~~~~~~--~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~ 342 (1156)
.......-..- .-..+...|.|++..+.+|+|.+++.-.+..-...|+-.....+..+..++.|++|+.++|...+..
T Consensus 243 ~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~ 322 (580)
T COG4618 243 GAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAA 322 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 11111111111 1233556788888999999999999988888888999999999999999999999999999764332
Q ss_pred ccccccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-
Q 037346 343 TDVLEKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG- 421 (1156)
Q Consensus 343 ~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g- 421 (1156)
. +..+...+++.+.++++++.-|. .++++++|+||++++||.++||||||||||||.++|.|..+|.+|.|++||
T Consensus 323 ~---~~m~LP~P~g~L~Ve~l~~~PPg-~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga 398 (580)
T COG4618 323 A---ERMPLPAPQGALSVERLTAAPPG-QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGA 398 (580)
T ss_pred c---CCCCCCCCCceeeEeeeeecCCC-CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecch
Confidence 2 22344456678999999997764 457999999999999999999999999999999999999999999999998
Q ss_pred ------------eEEEEecCCcCCCccHHHHhh-cCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 ------------TKAYVAQSPWIQSGKIEENIL-FGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 ------------~~~~v~Q~~~~~~~ti~eni~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
+|||.||+-.+|+|||.|||. |+.+.|.+++-++.+.++.++.+..+|+||||.||+.|..||||||
T Consensus 399 ~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQR 478 (580)
T COG4618 399 DLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQR 478 (580)
T ss_pred hhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHH
Confidence 589999999999999999996 7878899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
|||+||||+|.||.+++||||-|+||.+.+..+.+.+.. .+|.|+|+|||+++.+..+|+|++|++|++...|+.+|+
T Consensus 479 QRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eV 558 (580)
T COG4618 479 QRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEV 558 (580)
T ss_pred HHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHH
Confidence 999999999999999999999999999999999887654 678999999999999999999999999999999999988
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
+.
T Consensus 559 La 560 (580)
T COG4618 559 LA 560 (580)
T ss_pred HH
Confidence 75
No 82
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.8e-56 Score=590.82 Aligned_cols=188 Identities=21% Similarity=0.220 Sum_probs=155.9
Q ss_pred CCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCC----CCCCcEEEEcCe------------EEEEecCCcCCC-c
Q 037346 373 NPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGV----PKESGIIRLCGT------------KAYVAQSPWIQS-G 435 (1156)
Q Consensus 373 ~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~----~~~~G~i~~~g~------------~~~v~Q~~~~~~-~ 435 (1156)
+++|+|+|+++++||+++|+|||||||||||++|+|.. +|.+|+|.++|. ++|++|++.++. .
T Consensus 74 ~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~l 153 (1394)
T TIGR00956 74 FDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHL 153 (1394)
T ss_pred ceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCC
Confidence 56999999999999999999999999999999999986 578999999883 799999987665 5
Q ss_pred cHHHHhhcCCC----------CCHHH-----HHHHHHHhCCchhhhhCCCCCcccccc-CCCCCCHHHHHHHHHHHhhcc
Q 037346 436 KIEENILFGKE----------MDRER-----YERVLEACSLKKDLEVLPFGDQTIIGE-RGINLSGGQKQRIQIARPLYQ 499 (1156)
Q Consensus 436 ti~eni~~~~~----------~~~~~-----~~~~~~~~~l~~~~~~~~~g~~t~v~~-~g~~LSgGqkqRi~lAral~~ 499 (1156)
||+||+.|+.. .+++. .+.+++..+|.+ -.+|.+|+ ....|||||||||+|||||+.
T Consensus 154 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-------~~~t~vg~~~~~~LSGGerkRvsIA~aL~~ 226 (1394)
T TIGR00956 154 TVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSH-------TRNTKVGNDFVRGVSGGERKRVSIAEASLG 226 (1394)
T ss_pred CHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCccc-------ccCceeCCCcCCCCCcccchHHHHHHHHHh
Confidence 99999988521 22222 133556666643 23566654 457899999999999999999
Q ss_pred CCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCC-cc-ccCCEEEEEeCCeEEEccChHHHH
Q 037346 500 DADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVE-FL-PAADLILVIKDGKITQAGKYSDIL 567 (1156)
Q Consensus 500 ~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~-~~-~~~d~i~~l~~G~i~~~g~~~~l~ 567 (1156)
+|++++|||||++||+.++..+.+.+.. ..|+|+|+++|++. .+ ..+|+|++|++|++++.|+.+++.
T Consensus 227 ~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~ 299 (1394)
T TIGR00956 227 GAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAK 299 (1394)
T ss_pred CCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHH
Confidence 9999999999999999999998886644 24899999999974 45 469999999999999999998774
No 83
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=7e-55 Score=571.31 Aligned_cols=201 Identities=24% Similarity=0.377 Sum_probs=174.2
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------E
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------K 423 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------~ 423 (1156)
..|+++|+++.|+. +++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 927 ~~L~I~nLsK~y~~-~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecC-CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcchHHHHhhcE
Confidence 36999999999953 2467999999999999999999999999999999999999999999999983 6
Q ss_pred EEEecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHH
Q 037346 424 AYVAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIAR 495 (1156)
Q Consensus 424 ~~v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAr 495 (1156)
|||||++.+++ .|++||+.|+.. .. +++.++.++.++|.+.. .+...+||||||||++|||
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~-----------~~~~~~LSGGqKQRLsLAr 1074 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKR-----------NEEAQDLSGGMQRKLSVAI 1074 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHH
Confidence 99999998876 599999987421 11 23456677777775443 3455789999999999999
Q ss_pred hhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 496 PLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 496 al~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
||+.+|+++||||||++||+.+++.+++.+.+ .+|+|+|++||+++.+. .||+|++|++|+++..|+.+++.+
T Consensus 1075 ALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~ 1149 (2272)
T TIGR01257 1075 AFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKN 1149 (2272)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHH
Confidence 99999999999999999999999999887654 45899999999999986 599999999999999999998864
No 84
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-56 Score=547.72 Aligned_cols=196 Identities=23% Similarity=0.311 Sum_probs=156.9
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCCCc
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQSG 435 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~~~ 435 (1156)
|.++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|++..+..
T Consensus 2 i~i~nls~~~g---~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~~i~~~~q~~~~~~~ 78 (638)
T PRK10636 2 IVFSSLQIRRG---VRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNWQLAWVNQETPALPQ 78 (638)
T ss_pred EEEEEEEEEeC---CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCC
Confidence 78999999996 45799999999999999999999999999999999999999999999987 47999997644444
Q ss_pred cHHHHhhcCC----------------------------------CCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCC
Q 037346 436 KIEENILFGK----------------------------------EMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGI 481 (1156)
Q Consensus 436 ti~eni~~~~----------------------------------~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~ 481 (1156)
|+.+++.-+. ...+.+..++++.+++.. ........
T Consensus 79 ~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~----------~~~~~~~~ 148 (638)
T PRK10636 79 PALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSN----------EQLERPVS 148 (638)
T ss_pred CHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCc----------hhhcCchh
Confidence 5555443110 001123333444444421 11234567
Q ss_pred CCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCcccc-CCEEEEEeCCeEE-E
Q 037346 482 NLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPA-ADLILVIKDGKIT-Q 559 (1156)
Q Consensus 482 ~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~-~ 559 (1156)
+|||||||||+|||||+.+|++|||||||++||+.+..++.+.+... +.|+|+||||++++.. ||+|++|++|++. +
T Consensus 149 ~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~-~~tviivsHd~~~l~~~~d~i~~L~~G~i~~~ 227 (638)
T PRK10636 149 DFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSY-QGTLILISHDRDFLDPIVDKIIHIEQQSLFEY 227 (638)
T ss_pred hcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHhcCEEEEEeCCEEEEe
Confidence 89999999999999999999999999999999999999987765433 5799999999999864 9999999999996 6
Q ss_pred ccChHHHH
Q 037346 560 AGKYSDIL 567 (1156)
Q Consensus 560 ~g~~~~l~ 567 (1156)
.|+++.+.
T Consensus 228 ~g~~~~~~ 235 (638)
T PRK10636 228 TGNYSSFE 235 (638)
T ss_pred cCCHHHHH
Confidence 78887765
No 85
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=2.7e-55 Score=537.49 Aligned_cols=401 Identities=18% Similarity=0.282 Sum_probs=315.9
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+...++|.++++++++.|..||+++++|++++|++ .|+..++..+...+..++..++.+++.+++++.++|+
T Consensus 71 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~l~-----~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 145 (529)
T TIGR02857 71 AAAAVKSQLRERLLAAVAALGPGWLQGRPSGELATLAL-----EGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWI 145 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchhhccCChHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 45678889999999999999999999999999999999 7777777666666667777777777788888888998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAG 871 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 871 (1156)
++++++..+++..++...+.+..+...+......+...+.+.|+++|+++||+|+.|+++.+++.+..++..+.......
T Consensus 146 l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 225 (529)
T TIGR02857 146 SGLILLLTAPLIPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLR 225 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87665554444444444445555555555566677889999999999999999999999999999888877766655544
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHH---------------------HcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 872 AMEWLRFCIDMLSSITFAFS---LAFLI---------------------SVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 872 ~~~~~~~~l~~~~~~~~~~~---~~~~~---------------------~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
...+......++..+...+. ..+.+ .+..........+.....+.+|+.++.+.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~ 305 (529)
T TIGR02857 226 IAFLSSAVLELFATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPR 305 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 44444333333222211111 00000 0001111123566778889999999987543
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCC---------------CceeeCCCCCCHHHHHHHHhhcccCCCceEE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNL---------------PLVLRGRTGSGKSTLIQTLFRIVESTAGHIL 992 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~---------------~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~ 992 (1156)
+... .. +...+..+.|+|+||+|+|+++. .++|+|+||||||||+++|+|+|+|++|+|.
T Consensus 306 ~~~~----~~-~~~~~~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~ 380 (529)
T TIGR02857 306 PLAG----KA-PVTAAPAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIA 380 (529)
T ss_pred ccCC----Cc-CCCCCCCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Confidence 3211 11 11122246799999999996433 2456699999999999999999999999999
Q ss_pred EcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc---------
Q 037346 993 IDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ--------- 1062 (1156)
Q Consensus 993 idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~--------- 1062 (1156)
+||+|+++++.+++|+++++|||||++|+|||||||.++. +.+|+++++|++.+++++++.++|+||||.
T Consensus 381 ~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LS 460 (529)
T TIGR02857 381 VNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLS 460 (529)
T ss_pred ECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCC
Confidence 9999999999999999999999999999999999999865 467999999999999999999999999975
Q ss_pred ---------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEE
Q 037346 1063 ---------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLL 1122 (1156)
Q Consensus 1063 ---------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl 1122 (1156)
|||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||+++++.||+|+||
T Consensus 461 gGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 461 GGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 899999999999999999999999999999999988899999999999999999999986
No 86
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=5.9e-54 Score=571.84 Aligned_cols=443 Identities=20% Similarity=0.179 Sum_probs=328.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH-------HH--------------HHHHHHHHHHH
Q 037346 135 VQQFGIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER-------AL--------------LILYKKLGLAS 193 (1156)
Q Consensus 135 ~~~~~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~-------~~--------------~ll~~~lg~~~ 193 (1156)
..+.+.+.-..+...+++++++.+...+++.++|+++|+++.|++. .+ +++++..++.+
T Consensus 949 ~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~ 1028 (1490)
T TIGR01271 949 LVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIF 1028 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777888889999999999999999999999999999999987 00 00000001111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH--HHHHH---HHHH-HHH--
Q 037346 194 IATLLATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKKNE--TAWLK---KSVY-TEA-- 265 (1156)
Q Consensus 194 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~~e--~~~~~---~~~~-~~~-- 265 (1156)
++.++++++++.+..++.+..+..++.....+....+...|.++|+.+||.|++|.+..+ .+... +..+ ...
T Consensus 1029 l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1108 (1490)
T TIGR01271 1029 IAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTL 1108 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 100111111111112222223333444444555667889999999999999999922111 11111 0000 000
Q ss_pred -HHHHHHHH-HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 037346 266 -MISFFCWG-APTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQT 343 (1156)
Q Consensus 266 -~~~~~~~~-~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~ 343 (1156)
+....... ...++..+ +...+.....++|.+-.++++...+..++..+...+..+..+.+|.+||.++++.++...
T Consensus 1109 ~wl~~~~~~i~~~~~~~~--~~l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~ 1186 (1490)
T TIGR01271 1109 RWFQMRIDIIFVFFFIAV--TFIAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEP 1186 (1490)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 10000000 00010111 111111223456666666667777888888888888999999999999999997654322
Q ss_pred cccc--------------c-C-C-CCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHH
Q 037346 344 DVLE--------------K-M-P-RGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCI 406 (1156)
Q Consensus 344 ~~~~--------------~-~-~-~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i 406 (1156)
...+ . . + ..+..+.|+|+||+|+|+.. .+++|+|+||+|++||.+||||+||||||||+++|
T Consensus 1187 ~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL 1265 (1490)
T TIGR01271 1187 RPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSAL 1265 (1490)
T ss_pred cccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 1000 0 0 0 01234679999999999743 46899999999999999999999999999999999
Q ss_pred hCCCCCCCcEEEEcC-------------eEEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCc
Q 037346 407 LGGVPKESGIIRLCG-------------TKAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQ 473 (1156)
Q Consensus 407 ~g~~~~~~G~i~~~g-------------~~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~ 473 (1156)
+|+++ .+|+|.+|| +++||||+|.+|+|||||||.....+++++..++++.|+|.+.+..+|+|++
T Consensus 1266 ~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLd 1344 (1490)
T TIGR01271 1266 LRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLD 1344 (1490)
T ss_pred hhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccc
Confidence 99997 799999999 3699999999999999999987777889999999999999999999999999
Q ss_pred cccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEE
Q 037346 474 TIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVI 552 (1156)
Q Consensus 474 t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l 552 (1156)
|.||++|.+||||||||++|||||+++|+|||||||||+||+++.+.|.+.+.. .+++|+|+||||++.+..||+|++|
T Consensus 1345 t~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL 1424 (1490)
T TIGR01271 1345 FVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVI 1424 (1490)
T ss_pred cccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999998777655 5789999999999999999999999
Q ss_pred eCCeEEEccChHHHHhcCcchHHHHHhhh
Q 037346 553 KDGKITQAGKYSDILNSGTDFMELVGAHK 581 (1156)
Q Consensus 553 ~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 581 (1156)
++|+|++.|+|+++++.++.|.++++...
T Consensus 1425 ~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1425 EGSSVKQYDSIQKLLNETSLFKQAMSAAD 1453 (1490)
T ss_pred ECCEEEEeCCHHHHHcCCcHHHHHHHHhC
Confidence 99999999999999987778888876543
No 87
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=3.8e-53 Score=518.86 Aligned_cols=477 Identities=16% Similarity=0.185 Sum_probs=331.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCcc-c-chhhHH--HHHHHHHHHHHHHHHHHHHHH
Q 037346 71 LAKVLFFSAWQEILFIAILALLYTLATYVG-PYLIDNFVQYLNGRQAF-E-YEGYVL--CLSERHWFFQVQQFGIRFRAT 145 (1156)
Q Consensus 71 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-p~ll~~~i~~~~~~~~~-~-~~g~~l--~~~~~~~~~~~~~~~~~~r~~ 145 (1156)
+++.+++.+++.++..+++.++..++.++. |++.+.+++.+...... . ..++++ .+......+...+++.++...
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYR 82 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678888888888889999999888874 77878888865321110 0 111111 122222334456677888888
Q ss_pred HHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 146 LFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAERA--------------------LLILYKKLGLASIATLLATAIVML 205 (1156)
Q Consensus 146 l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~~--------------------~~ll~~~lg~~~l~~~~~~~~~~~ 205 (1156)
++..+|+|.++++...+++.++|++++++++|++.. ++++++.-+..+++.++++++.++
T Consensus 83 lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~~~~~ 162 (547)
T PRK10522 83 LRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAIWMAVTIW 162 (547)
T ss_pred HHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999999889999999999999999870 001111111111112222222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH----H--HH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 206 ANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELK----K--NE-TAWLKKSVYTEAMISFFCWGAPTFV 278 (1156)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r----~--~e-~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (1156)
+...+.+...+..++.++..++..+.+.|.++|++++++...... + .+ .+..++.................++
T Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (547)
T PRK10522 163 GGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAVNWSNIM 242 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 344455666667777788888999999999999999974331110 0 00 0111111111111111111111111
Q ss_pred HHHHHHHHHHhCCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCC
Q 037346 279 SVVTFGSCILLGIP---LESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSD 355 (1156)
Q Consensus 279 ~~~~f~~~~~~~~~---lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~ 355 (1156)
..+.++.+++.++. .+.+.+..+..+...+..|+..+...+..+.+++.+++|+.++++.++..+.. +..+ .+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~-~~~~-~~~~ 320 (547)
T PRK10522 243 MLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFP-RPQA-FPDW 320 (547)
T ss_pred HHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc-cccc-cCcC
Confidence 12222323322221 22233333333334467899999999999999999999999998654322111 1111 1112
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
+.++++|++|+|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 321 ~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 398 (547)
T PRK10522 321 QTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKL 398 (547)
T ss_pred ceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhh
Confidence 46999999999973 347999999999999999999999999999999999999999999999983
Q ss_pred EEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 423 KAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
++|++|+|.+|++|++|| +...+++..+++++.+++..++.. ++|. .+|.+||||||||++||||++++|+
T Consensus 399 i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ 469 (547)
T PRK10522 399 FSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQKKRLALLLALAEERD 469 (547)
T ss_pred eEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 699999999999999999 445667778888888888766542 3221 1478999999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEeCCeEEEc
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIKDGKITQA 560 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~ 560 (1156)
++|||||||+||+++++.+.+.+.. ..++|+|+|||+++.+..||+|++|++|++++.
T Consensus 470 ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 470 ILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999988876643 248999999999999999999999999999865
No 88
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.2e-54 Score=534.73 Aligned_cols=195 Identities=27% Similarity=0.363 Sum_probs=156.7
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--EEEEecCCcC-C
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--KAYVAQSPWI-Q 433 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--~~~v~Q~~~~-~ 433 (1156)
.|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|++|.+.. .
T Consensus 3 ~l~i~~ls~~~~---~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~~~~~~l~q~~~~~~ 79 (635)
T PRK11147 3 LISIHGAWLSFS---DAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQDLIVARLQQDPPRNV 79 (635)
T ss_pred EEEEeeEEEEeC---CceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCCCEEEEeccCCCCCC
Confidence 488999999996 357999999999999999999999999999999999999999999999874 6899997643 2
Q ss_pred CccHHHHhhcCCC-------------------C----------------------CHHHHHHHHHHhCCchhhhhCCCCC
Q 037346 434 SGKIEENILFGKE-------------------M----------------------DRERYERVLEACSLKKDLEVLPFGD 472 (1156)
Q Consensus 434 ~~ti~eni~~~~~-------------------~----------------------~~~~~~~~~~~~~l~~~~~~~~~g~ 472 (1156)
.+++.+++..+.. . .+.+..++++.+++.
T Consensus 80 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~---------- 149 (635)
T PRK11147 80 EGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLD---------- 149 (635)
T ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCC----------
Confidence 3577766532210 0 011122222222221
Q ss_pred ccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCcccc-CCEEEE
Q 037346 473 QTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPA-ADLILV 551 (1156)
Q Consensus 473 ~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~-~d~i~~ 551 (1156)
......+|||||||||+|||||+.+|++|||||||++||+.+..++.+.+.... .|||+|||+++++.. ||+|++
T Consensus 150 ---~~~~~~~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~-~tvlivsHd~~~l~~~~d~i~~ 225 (635)
T PRK11147 150 ---PDAALSSLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQ-GSIIFISHDRSFIRNMATRIVD 225 (635)
T ss_pred ---CCCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHhcCeEEE
Confidence 134567899999999999999999999999999999999999999987765443 699999999999865 999999
Q ss_pred EeCCeEE-EccChHHHHh
Q 037346 552 IKDGKIT-QAGKYSDILN 568 (1156)
Q Consensus 552 l~~G~i~-~~g~~~~l~~ 568 (1156)
|++|+++ +.|+++++..
T Consensus 226 L~~G~i~~~~g~~~~~~~ 243 (635)
T PRK11147 226 LDRGKLVSYPGNYDQYLL 243 (635)
T ss_pred EECCEEEEecCCHHHHHH
Confidence 9999997 5688877654
No 89
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.7e-53 Score=522.19 Aligned_cols=410 Identities=17% Similarity=0.188 Sum_probs=311.0
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPY-DIGAFAFSMIQLLGIIVVMSLVAW 790 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1156)
.+.++...+|.++++++++.|+. ..|...++++ .|+..+...+.. .+..++..++.++ .+++++.++|
T Consensus 73 ~~~~~~~~lr~~~~~~ll~~~~~-----~~~~~~~~~~-----~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ 141 (544)
T TIGR01842 73 IGEKLDGALNQPIFAASFSATLR-----RGKIDGLQAL-----RDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHP 141 (544)
T ss_pred HHHHHHHHHHHHHHHHHhcCccc-----CccchHHHHH-----HHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhh
Confidence 45678889999999999999984 2366788888 566665554433 2333344334333 3456778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHH
Q 037346 791 QVLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIA 870 (1156)
Q Consensus 791 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 870 (1156)
+++++++..+++.+++..++.+..+...+...+..+...+++.|+++|+++||+|+.|+.+.+++.+..++..+......
T Consensus 142 ~l~li~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 221 (544)
T TIGR01842 142 WIGILALGGAVVLVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAAS 221 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 88766554444444444444444455555566777888999999999999999999999999999998888766655444
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHH---------------------HHcCCCccchHHHHHHHhHHHHHHHHhhcCC
Q 037346 871 GAMEWLRFCIDMLSSITFAF---SLAFL---------------------ISVPNGIIHPYKNLERKIISVERILQCACIP 926 (1156)
Q Consensus 871 ~~~~~~~~~l~~~~~~~~~~---~~~~~---------------------~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~ 926 (1156)
....+......++..+...+ ...++ ..+..........+.....+.+|+.++.+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~ 301 (544)
T TIGR01842 222 DRAGMLSNLSKYFRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANY 301 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33333222222211111110 00000 0011111122256678889999999998766
Q ss_pred CCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCC---------------CCceeeCCCCCCHHHHHHHHhhcccCCCceE
Q 037346 927 SEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPN---------------LPLVLRGRTGSGKSTLIQTLFRIVESTAGHI 991 (1156)
Q Consensus 927 ~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~---------------~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I 991 (1156)
++.... .. ..+..+.|+++||+|+|+++ +.++|+|+||||||||+++|+|+|+|++|+|
T Consensus 302 ~~~~~~---~~---~~~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i 375 (544)
T TIGR01842 302 PSRDPA---MP---LPEPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSV 375 (544)
T ss_pred ccccCC---CC---CCCCCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE
Confidence 553211 10 11234679999999999543 2346779999999999999999999999999
Q ss_pred EEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc--------
Q 037346 992 LIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------- 1062 (1156)
Q Consensus 992 ~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~-------- 1062 (1156)
.+||+|+.+++.+.+|+++++|||||++|++|+||||.++++ .++++++++++.++++++++++|+|+|+.
T Consensus 376 ~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~L 455 (544)
T TIGR01842 376 RLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATL 455 (544)
T ss_pred EECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCC
Confidence 999999999999999999999999999999999999986654 78999999999999999999999999974
Q ss_pred ----------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc-CCceEEEeecCcccccccCEEEEEeCcEEeeec
Q 037346 1063 ----------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF-SDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYD 1131 (1156)
Q Consensus 1063 ----------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G 1131 (1156)
|||++++|+|||||||||+||+++++.|.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|
T Consensus 456 SgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g 535 (544)
T TIGR01842 456 SGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFG 535 (544)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeC
Confidence 899999999999999999999999999999999875 689999999999999999999999999999999
Q ss_pred ChhHHhc
Q 037346 1132 SPTKLLE 1138 (1156)
Q Consensus 1132 ~~~eLl~ 1138 (1156)
+|++|++
T Consensus 536 ~~~~l~~ 542 (544)
T TIGR01842 536 ERDEVLA 542 (544)
T ss_pred CHHHHhh
Confidence 9999985
No 90
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1e-52 Score=514.98 Aligned_cols=411 Identities=15% Similarity=0.142 Sum_probs=307.2
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.+...++|.++++++++.|+.||+++++|++++|++ .|+..++..+. .+..++..++.+++.++++++.+|.
T Consensus 80 ~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~-----~Dv~~i~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (555)
T TIGR01194 80 AGMHIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLT-----HDIDQINAFLF-IFPPIAIALAIFFFCIAYLAYLSVP 153 (555)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHh-----hhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 56788899999999999999999999999999999999 66666665543 3555666677777888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHH--HHHHHHHHHHHHHhhHHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQEL--RFRDTNMKLIDEYSRPKFHI 869 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~--~~~~~~~~~~~~~~~~~~~~ 869 (1156)
++++++.++++.+++..+..+..++..+......+.+.+.+.|.+.|+++||+|+.++ ...+++.+..++..+.....
T Consensus 154 L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (555)
T TIGR01194 154 MFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIE 233 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9887666555555544444444455555556667789999999999999999999954 45566666666655544332
Q ss_pred HHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCC
Q 037346 870 AGAMEWLRFCIDMLSSITFA---------------------FSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSE 928 (1156)
Q Consensus 870 ~~~~~~~~~~l~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e 928 (1156)
............++..+... .....+..+.........+++....+.+|+.++.+.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~ 313 (555)
T TIGR01194 234 ILIFIAAENFGQLLFFLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNE 313 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 22221111111111100000 000011111112222336778889999999998754322
Q ss_pred CcccccCCC-CC----CCCCCCCeEEEEEEEEEEcCC---C---------------CceeeCCCCCCHHHHHHHHhhccc
Q 037346 929 PALVIEATK-PN----NSRPSHGEVNIRHLQVRYAPN---L---------------PLVLRGRTGSGKSTLIQTLFRIVE 985 (1156)
Q Consensus 929 ~~~~~~~~~-~~----~~~p~~g~I~~~~Vsf~Y~~~---~---------------~~vL~G~SGsGKSTL~~lL~rl~~ 985 (1156)
++...+... .. ......+.|+|+||+|+|++. . .++|+||||||||||+++|+|+|+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~ 393 (555)
T TIGR01194 314 PEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYI 393 (555)
T ss_pred ccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC
Confidence 211100000 00 111124679999999999642 1 134669999999999999999999
Q ss_pred CCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc---
Q 037346 986 STAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ--- 1062 (1156)
Q Consensus 986 p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~--- 1062 (1156)
|++|+|.+||+|+++++.+++|+++++|+|||++|++|+++|+. ++.++++++++++.+++++++..+|+|||+.
T Consensus 394 p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~--~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~~~L 471 (555)
T TIGR01194 394 PQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDEG--EHASLDNAQQYLQRLEIADKVKIEDGGFSTTTAL 471 (555)
T ss_pred CCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhcccc--cchhHHHHHHHHHHcCCchhhcccccccCCcccC
Confidence 99999999999999999999999999999999999999999973 3567899999999999999999999999855
Q ss_pred ----------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHH-h-cCCceEEEeecCcccccccCEEEEEeCcEEeee
Q 037346 1063 ----------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQ-H-FSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEY 1130 (1156)
Q Consensus 1063 ----------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~-~-~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~ 1130 (1156)
|||++++|+|||||||||+||++|++.|++.+.+ . .+++|+|+||||++++..||+|+||++|+|+|.
T Consensus 472 SgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 472 STGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 8999999999999999999999999999987643 3 468999999999999999999999999999974
No 91
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.4e-54 Score=465.43 Aligned_cols=438 Identities=23% Similarity=0.313 Sum_probs=327.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCCHH--------------HHHH-----HHH--HHHHHHHHHHHHHHHHHHHHH
Q 037346 138 FGIRFRATLFAMIYNKGLTLSGQAKQGNTSG--------------EIIN-----LIA--VDAERALLILYKKLGLASIAT 196 (1156)
Q Consensus 138 ~~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g--------------~i~n-----l~s--~D~~~~~~ll~~~lg~~~l~~ 196 (1156)
++......+.-..|.++++++...+-+..+| .++. .+. .|+.....++++..||.....
T Consensus 9 v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~ 88 (497)
T COG5265 9 VGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALT 88 (497)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHH
Confidence 3444445556667777777765544333333 2222 111 222224455666666655443
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-----HHHHHHHHHHHH--HHHH
Q 037346 197 L-LATAIVMLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKKN-----ETAWLKKSVYTE--AMIS 268 (1156)
Q Consensus 197 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~~-----e~~~~~~~~~~~--~~~~ 268 (1156)
. +.+++...+........-.++++..++-.+......+.|-+..+||.|+-|..+. -+..+.+..... +...
T Consensus 89 t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~ 168 (497)
T COG5265 89 TLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLV 168 (497)
T ss_pred HHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHH
Confidence 3 3333333333333333344555555555555678889999999999999881111 111222211110 1110
Q ss_pred HHHHHHHH----HHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 037346 269 FFCWGAPT----FVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTD 344 (1156)
Q Consensus 269 ~~~~~~~~----~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~ 344 (1156)
..+....+ .....+.+..-+..+.+|.|++...-++...+..|++.+...+..+.+++.-.++..+.+..+-...+
T Consensus 169 Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d 248 (497)
T COG5265 169 LNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSD 248 (497)
T ss_pred HHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhcc
Confidence 00000111 11122233334457889999999999999999999999999999999999999999999976533222
Q ss_pred ccccCCCC-CCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-
Q 037346 345 VLEKMPRG-NSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT- 422 (1156)
Q Consensus 345 ~~~~~~~~-~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~- 422 (1156)
..+..+.. ...+.+.|+|++|.|. +.+++|+++||++++|+.+++|||+|+||||++++|.++|++++|.|.+||+
T Consensus 249 ~pda~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qd 326 (497)
T COG5265 249 APDAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQD 326 (497)
T ss_pred CCCCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchh
Confidence 11111111 2346799999999997 4679999999999999999999999999999999999999999999999995
Q ss_pred ------------EEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 423 ------------KAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 423 ------------~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
||.|||+..|||.|+..||.+|++ ..++....+.+++++.+.++.+|+|++|.|||+|-.|||||||
T Consensus 327 ir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekq 406 (497)
T COG5265 327 IRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQ 406 (497)
T ss_pred HHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHH
Confidence 699999999999999999999986 5677888999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHh
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
||++||+++++|+|++|||+|||||.++++.|...+.. .+|+|.++|.||++++-.||.|+||++|+|+|.|+|++++.
T Consensus 407 rvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll~ 486 (497)
T COG5265 407 RVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELLA 486 (497)
T ss_pred HHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHHH
Confidence 99999999999999999999999999999998666544 67999999999999999999999999999999999999999
Q ss_pred cCcchHHHH
Q 037346 569 SGTDFMELV 577 (1156)
Q Consensus 569 ~~~~~~~~~ 577 (1156)
.++.|.+++
T Consensus 487 ~~g~ya~mw 495 (497)
T COG5265 487 AGGLYAEMW 495 (497)
T ss_pred cCChHHHHh
Confidence 988888775
No 92
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=8.1e-53 Score=497.53 Aligned_cols=460 Identities=22% Similarity=0.319 Sum_probs=321.6
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCCC
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQS 434 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~~ 434 (1156)
.|.++|++++|+ ++++|+|+||++.+|+++||||+|||||||||++|.|+..|++|+|...+ +++|++|++....
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~ 79 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDP 79 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCC
Confidence 588999999995 57899999999999999999999999999999999999999999999987 7999999999875
Q ss_pred c-cHHHHhhcCCCCC---HHHHHHHHH------------------Hh-------CCchhhhhCCCCCccccccCCCCCCH
Q 037346 435 G-KIEENILFGKEMD---RERYERVLE------------------AC-------SLKKDLEVLPFGDQTIIGERGINLSG 485 (1156)
Q Consensus 435 ~-ti~eni~~~~~~~---~~~~~~~~~------------------~~-------~l~~~~~~~~~g~~t~v~~~g~~LSg 485 (1156)
. ||.|.+.-+...- ..+++.... .. .....+..+ |.... .....+|||
T Consensus 80 ~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~~-~~~~~~LSG 156 (530)
T COG0488 80 EKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPDE-DRPVSSLSG 156 (530)
T ss_pred CccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCcc-cCchhhcCH
Confidence 5 9999998774310 011111110 00 001112222 22222 455678999
Q ss_pred HHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCcccc-CCEEEEEeCCeE-EEccCh
Q 037346 486 GQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPA-ADLILVIKDGKI-TQAGKY 563 (1156)
Q Consensus 486 GqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i-~~~g~~ 563 (1156)
|||.||+|||||..+||+|||||||++||..+..|+-+.+...+| |+|+||||.+++.. |++|+.+++|++ .+.|+|
T Consensus 157 G~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny 235 (530)
T COG0488 157 GWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNY 235 (530)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCH
Confidence 999999999999999999999999999999999999888766777 99999999999986 999999999987 488888
Q ss_pred HHHHhcCcchHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHh
Q 037346 564 SDILNSGTDFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEERE 643 (1156)
Q Consensus 564 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 643 (1156)
+.+++......+......+ + .+++.+
T Consensus 236 ~~~~~~r~~~~~~~~~~~~----------------------------------------------~-------~~~~~~- 261 (530)
T COG0488 236 SSYLEQKAERLRQEAAAYE----------------------------------------------K-------QQKELA- 261 (530)
T ss_pred HHHHHHHHHHHHHHHHHHH----------------------------------------------H-------HHHHHH-
Confidence 8776432110000000000 0 000000
Q ss_pred cCcccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 037346 644 KGKVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNK 723 (1156)
Q Consensus 644 ~g~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 723 (1156)
....++
T Consensus 262 -------~~~~~i------------------------------------------------------------------- 267 (530)
T COG0488 262 -------KEQEWI------------------------------------------------------------------- 267 (530)
T ss_pred -------HHHHHH-------------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 724 MHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATF 803 (1156)
Q Consensus 724 l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~ 803 (1156)
+|+. .
T Consensus 268 ----------------------~r~~-----~------------------------------------------------ 272 (530)
T COG0488 268 ----------------------RRGK-----A------------------------------------------------ 272 (530)
T ss_pred ----------------------HHHH-----h------------------------------------------------
Confidence 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 037346 804 IWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDML 883 (1156)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 883 (1156)
...+.++.
T Consensus 273 ------~~~~~k~a------------------------------------------------------------------ 280 (530)
T COG0488 273 ------AASKAKKA------------------------------------------------------------------ 280 (530)
T ss_pred ------ccchHHHH------------------------------------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHh--h------------cCCCCCc----ccccCCCCCCCCCCC
Q 037346 884 SSITFAFSLAFLISVPNGIIHPYKNLERKIISVERILQC--A------------CIPSEPA----LVIEATKPNNSRPSH 945 (1156)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~--~------------~~~~e~~----~~~~~~~~~~~~p~~ 945 (1156)
+.....++++..- . ..++++. ...+..+....+. .
T Consensus 281 --------------------------~sr~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~-~ 333 (530)
T COG0488 281 --------------------------KSRIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYD-G 333 (530)
T ss_pred --------------------------HHHHHHHHHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccccccC-C
Confidence 0000001111100 0 0000000 0000011111111 1
Q ss_pred CeEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccc-ccc-ccc
Q 037346 946 GEVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDP-TMF-EGT 1023 (1156)
Q Consensus 946 g~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp-~LF-~gT 1023 (1156)
+...|++++|...+++.++|.||+|+|||||+++|.|-..|.+|+|.++- .-++||.+|+. .++ +.|
T Consensus 334 ~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~-----------~v~igyf~Q~~~~l~~~~t 402 (530)
T COG0488 334 GRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE-----------TVKIGYFDQHRDELDPDKT 402 (530)
T ss_pred CceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC-----------ceEEEEEEehhhhcCccCc
Confidence 24566666666667777889999999999999999999999999999863 13599999998 344 338
Q ss_pred chhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc--------ccccccCCCEEEEecCCcCCCHHHHHHHHHHH
Q 037346 1024 TRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ--------GRVLLKKSKVLVLDEATASVDTATDNQIQQTL 1094 (1156)
Q Consensus 1024 Ir~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~--------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l 1094 (1156)
+-|++.... ...+.+++..|.+.++...-...|-+-.|+ |+.++.+|.+|||||||.+||.+|-..+.++|
T Consensus 403 ~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL 482 (530)
T COG0488 403 VLEELSEGFPDGDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEAL 482 (530)
T ss_pred HHHHHHhhCccccHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHH
Confidence 888886544 333788999999999987666555555555 67888999999999999999999999999999
Q ss_pred HHhcCCceEEEeecCcccccc-cCEEEEEeCcEEeee-cChhHHhcC
Q 037346 1095 RQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEY-DSPTKLLEN 1139 (1156)
Q Consensus 1095 ~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~-G~~~eLl~~ 1139 (1156)
.++ ..|||+|+|+-..+.. |++|+++++ ++.++ |.+++..+.
T Consensus 483 ~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 483 LDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred HhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 987 6799999999998876 899999999 88887 888887754
No 93
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3.4e-52 Score=514.97 Aligned_cols=173 Identities=15% Similarity=0.218 Sum_probs=136.3
Q ss_pred EEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccC
Q 037346 950 IRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLD 1029 (1156)
Q Consensus 950 ~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~ 1029 (1156)
|+|++|...+++.++|.|+||||||||+++|+|+.+|++|+|.+++ +.+|+|+||++. ..-++.+|..
T Consensus 525 l~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~igyv~Q~~~-~~l~~~~~~~ 592 (718)
T PLN03073 525 FKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRMAVFSQHHV-DGLDLSSNPL 592 (718)
T ss_pred EeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeEEEEecccc-ccCCcchhHH
Confidence 3344444444555677899999999999999999999999999875 347999999973 2234555521
Q ss_pred -----CCCCCCHHHHHHHHHHcCCCh-HHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHH
Q 037346 1030 -----PLEEHADEQIWEALDKCQLGD-EVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQ 1096 (1156)
Q Consensus 1030 -----~~~~~~deei~~al~~~~l~~-~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~ 1096 (1156)
......++++.++|+..++.+ .....|..|..+ |||++++|++|||||||++||+.+...+.+.|.+
T Consensus 593 ~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~~~~~~LSgGqkqRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~ 672 (718)
T PLN03073 593 LYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVL 672 (718)
T ss_pred HHHHHhcCCCCHHHHHHHHHHCCCChHHhcCCccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHH
Confidence 112345778999999999975 445555555443 8999999999999999999999999999999987
Q ss_pred hcCCceEEEeecCcccccc-cCEEEEEeCcEEe-eecChhHH
Q 037346 1097 HFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIK-EYDSPTKL 1136 (1156)
Q Consensus 1097 ~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~Iv-E~G~~~eL 1136 (1156)
. +.|||+|||++..+.. ||+|++|++|+|+ ..|++++.
T Consensus 673 ~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 673 F--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred c--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 5 3599999999998875 9999999999998 56877664
No 94
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3.9e-52 Score=546.44 Aligned_cols=188 Identities=23% Similarity=0.307 Sum_probs=154.6
Q ss_pred CCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC---CcEEEEcCe----------EEEEecCCcCC-CccHH
Q 037346 373 NPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE---SGIIRLCGT----------KAYVAQSPWIQ-SGKIE 438 (1156)
Q Consensus 373 ~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~---~G~i~~~g~----------~~~v~Q~~~~~-~~ti~ 438 (1156)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|. ++||+|++.++ ..||+
T Consensus 178 ~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~ 257 (1470)
T PLN03140 178 LTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVK 257 (1470)
T ss_pred ceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHH
Confidence 56899999999999999999999999999999999999998 999999883 69999998765 46999
Q ss_pred HHhhcCCC-------CC-------HH---------HH------------------HHHHHHhCCchhhhhCCCCCccccc
Q 037346 439 ENILFGKE-------MD-------RE---------RY------------------ERVLEACSLKKDLEVLPFGDQTIIG 477 (1156)
Q Consensus 439 eni~~~~~-------~~-------~~---------~~------------------~~~~~~~~l~~~~~~~~~g~~t~v~ 477 (1156)
||+.|+.. ++ ++ ++ +.+++..+| .+..+|.||
T Consensus 258 EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL-------~~~~~t~vg 330 (1470)
T PLN03140 258 ETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGL-------DICKDTIVG 330 (1470)
T ss_pred HHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCC-------ccccCceeC
Confidence 99988421 00 11 11 122222232 334567776
Q ss_pred cC-CCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCC-cc-ccCCEEEE
Q 037346 478 ER-GINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVE-FL-PAADLILV 551 (1156)
Q Consensus 478 ~~-g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~-~~-~~~d~i~~ 551 (1156)
+. ...|||||||||+|||+++.+|++++|||||++||+.++.++.+.+.. ..|+|+|+++|++. .+ ..+|+|++
T Consensus 331 ~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vil 410 (1470)
T PLN03140 331 DEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIIL 410 (1470)
T ss_pred CccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEE
Confidence 54 468999999999999999999999999999999999999999876644 25899999999974 44 56999999
Q ss_pred EeCCeEEEccChHHHH
Q 037346 552 IKDGKITQAGKYSDIL 567 (1156)
Q Consensus 552 l~~G~i~~~g~~~~l~ 567 (1156)
|++|++++.|+.+++.
T Consensus 411 L~~G~ivy~G~~~~~~ 426 (1470)
T PLN03140 411 LSEGQIVYQGPRDHIL 426 (1470)
T ss_pred eeCceEEEeCCHHHHH
Confidence 9999999999998876
No 95
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.4e-50 Score=502.36 Aligned_cols=467 Identities=17% Similarity=0.168 Sum_probs=332.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--ccc-hh----hHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 82 EILFIAILALLYTLATYVGPYLIDNFVQYLNGRQA--FEY-EG----YVL--CLSERHWFFQVQQFGIRFRATLFAMIYN 152 (1156)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~--~~~-~g----~~l--~~~~~~~~~~~~~~~~~~r~~l~~~i~~ 152 (1156)
.++..+++.++.+++.+..|++.+.+++.+...+. +.. .. +++ ++......|...++..++|..+...+.+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677788888899999999999999998764322 111 11 111 2222333344566667777777666666
Q ss_pred HHhcC----CccccCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 037346 153 KGLTL----SGQAKQGNTSGEIINLIAVDAER---------------------ALLILYKKLGLAS-IATLLATAIVMLA 206 (1156)
Q Consensus 153 k~l~l----~~~~~~~~~~g~i~nl~s~D~~~---------------------~~~ll~~~lg~~~-l~~~~~~~~~~~~ 206 (1156)
+.++- +...+++ ++|++.+++++|++. +++.++..+++.. ++.++.+++.+.+
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 66553 3333343 579999999999987 1111222233322 2222233344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHH----HHHHHHHHHHHHHHHHHHH--
Q 037346 207 NFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKKNE-----TAW----LKKSVYTEAMISFFCWGAP-- 275 (1156)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~~e-----~~~----~~~~~~~~~~~~~~~~~~~-- 275 (1156)
...+.+...+..++..+..++-.+..+|.++|+++||+|+.|.++.+ .+. ..+.....+....+.....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 55566677777888888888888999999999999999998822111 111 1111111111111111111
Q ss_pred --HHHHHHHHHHHHHh-C----CCccHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc-
Q 037346 276 --TFVSVVTFGSCILL-G----IPLESGMILS-AL---TTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQT- 343 (1156)
Q Consensus 276 --~~~~~~~f~~~~~~-~----~~lt~~~~ft-~l---~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~- 343 (1156)
..+..+..+..++. . +.+|.|..+. ++ .++..+..|+..+...+..+.++.++.+||.++++.++...
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~ 415 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKS 415 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11112222222222 1 5688887654 33 34567789999999999999999999999999997532100
Q ss_pred ------cccc--c--------------CCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHH
Q 037346 344 ------DVLE--K--------------MPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSS 401 (1156)
Q Consensus 344 ------~~~~--~--------------~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKST 401 (1156)
...+ . .......+.|+++|++|.|+. ++++|+|+||+|++||+++|+|||||||||
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl~i~~Ge~~~IvG~nGsGKST 493 (659)
T TIGR00954 416 GNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSFEVPSGNHLLICGPNGCGKSS 493 (659)
T ss_pred ccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceEEECCCCEEEEECCCCCCHHH
Confidence 0000 0 000112346999999999963 347999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCCCccHHHHhhcCC--------CCCHHHHHHHHHHhCCchhhhhCCCC
Q 037346 402 CLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQSGKIEENILFGK--------EMDRERYERVLEACSLKKDLEVLPFG 471 (1156)
Q Consensus 402 ll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~~~ti~eni~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~g 471 (1156)
|+++|+|+++|++|+|.+++ +++||||+|+++++|++|||.++. ..++++.+++++.+++.+.++. |.|
T Consensus 494 Ll~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g 572 (659)
T TIGR00954 494 LFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER-EGG 572 (659)
T ss_pred HHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCC
Confidence 99999999999999999875 589999999999999999999874 2456778889999999888877 889
Q ss_pred CccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccccCCEEEE
Q 037346 472 DQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPAADLILV 551 (1156)
Q Consensus 472 ~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~~d~i~~ 551 (1156)
++|..+ .+.+||||||||++||||++++|+++|||||||+||+.+++.+.+.+.. .|+|+|+|||+++.++.||++++
T Consensus 573 ~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~-~~~tvI~isH~~~~~~~~d~il~ 650 (659)
T TIGR00954 573 WSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE-FGITLFSVSHRKSLWKYHEYLLY 650 (659)
T ss_pred cccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH-cCCEEEEEeCchHHHHhCCEEEE
Confidence 999876 5779999999999999999999999999999999999999998776543 48999999999999989999999
Q ss_pred EeC
Q 037346 552 IKD 554 (1156)
Q Consensus 552 l~~ 554 (1156)
|+.
T Consensus 651 l~~ 653 (659)
T TIGR00954 651 MDG 653 (659)
T ss_pred EeC
Confidence 973
No 96
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=4.2e-52 Score=506.07 Aligned_cols=170 Identities=18% Similarity=0.243 Sum_probs=144.9
Q ss_pred EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccccc-ccccchhc
Q 037346 949 NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTM-FEGTTRSN 1027 (1156)
Q Consensus 949 ~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~L-F~gTIr~N 1027 (1156)
.|++++|..++++.++|.|+||||||||+++|+|+.+|++|+|.++ .+++|+||++.+ ++.|+++|
T Consensus 354 ~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~y~~Q~~~~~~~~tv~e~ 420 (590)
T PRK13409 354 SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKISYKPQYIKPDYDGTVEDL 420 (590)
T ss_pred EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEEEecccccCCCCCcHHHH
Confidence 4788888888888889999999999999999999999999999986 159999999875 46799999
Q ss_pred cCCCC-CC-CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc
Q 037346 1028 LDPLE-EH-ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF 1098 (1156)
Q Consensus 1028 l~~~~-~~-~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~ 1098 (1156)
+.... .. .+..+.++++..++.+.....+..|..+ ||||+++|+||||||||++||.++...+.+.|+++.
T Consensus 421 l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~ 500 (590)
T PRK13409 421 LRSITDDLGSSYYKSEIIKPLQLERLLDKNVKDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIA 500 (590)
T ss_pred HHHHhhhcChHHHHHHHHHHCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHH
Confidence 96531 22 2345788999999988777777666644 899999999999999999999999999999999874
Q ss_pred C--CceEEEeecCcccccc-cCEEEEEeCcEEeeecC
Q 037346 1099 S--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1099 ~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~ 1132 (1156)
+ ++|+|+|+|+++.+.. ||||+||+ |++...|+
T Consensus 501 ~~~g~tviivsHD~~~~~~~aDrvivl~-~~~~~~g~ 536 (590)
T PRK13409 501 EEREATALVVDHDIYMIDYISDRLMVFE-GEPGKHGH 536 (590)
T ss_pred HhCCCEEEEEeCCHHHHHHhCCEEEEEc-Ccceeeee
Confidence 3 7899999999998764 99999996 58877766
No 97
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-49 Score=500.46 Aligned_cols=443 Identities=20% Similarity=0.248 Sum_probs=328.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH-----H------HHHHHHHHHHHHHHHHH---H
Q 037346 134 QVQQFGIRFRATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER-----A------LLILYKKLGLASIATLL---A 199 (1156)
Q Consensus 134 ~~~~~~~~~r~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~-----~------~~ll~~~lg~~~l~~~~---~ 199 (1156)
.....+.+.-..|-..++++.++-+...++..++|.|+|+.+.|++. . +..+...+|..++++.. +
T Consensus 881 ~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~f 960 (1381)
T KOG0054|consen 881 LFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWF 960 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHH
Confidence 34566778888889999999999999999999999999999999987 1 11111222222221111 1
Q ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH--HH----HHHHHHHHHH
Q 037346 200 TAIVMLAN---FPLGRLREKFQDKFMET----KDRRIKATSEILRNMRILKLQGWELKKNET--AW----LKKSVYTEAM 266 (1156)
Q Consensus 200 ~~~~~~~~---~~~~~~~~~~~~~~~~~----~d~r~~~~~e~l~~i~~IK~~~~e~r~~e~--~~----~~~~~~~~~~ 266 (1156)
++.++|+. +++.+......++..+. +.--.+..+|.++|+-+|++|+.|.|=.+. .. .+......+.
T Consensus 961 li~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a 1040 (1381)
T KOG0054|consen 961 LIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISA 1040 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 11111211 22222222222222111 111246789999999999999999332111 11 1111111111
Q ss_pred HHHHHH---HH-HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 037346 267 ISFFCW---GA-PTFVSVVTFGSCILLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQ 342 (1156)
Q Consensus 267 ~~~~~~---~~-~~~~~~~~f~~~~~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~ 342 (1156)
+-++.. .. ..++..+++.+.+..++..++|.+=-+++|-..+..-+..+-.....+-.-.+|.+||.+|.+.|++.
T Consensus 1041 ~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~ 1120 (1381)
T KOG0054|consen 1041 NRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEA 1120 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCC
Confidence 111111 11 11111222222222233377899988888888888888888888888888999999999999965442
Q ss_pred cccc-cc--CCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEE
Q 037346 343 TDVL-EK--MPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRL 419 (1156)
Q Consensus 343 ~~~~-~~--~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~ 419 (1156)
+... +. .+.-+.++.|+|+|++.+|..+ ..++|+|+||+|++||++||||.+|||||||+++|-++.+|.+|+|.+
T Consensus 1121 p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~I 1199 (1381)
T KOG0054|consen 1121 PLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILI 1199 (1381)
T ss_pred CCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEE
Confidence 2111 11 1223467899999999999753 468999999999999999999999999999999999999999999999
Q ss_pred cC-------------eEEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 420 CG-------------TKAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 420 ~g-------------~~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
|| +++.+||+|.+|+||+|.|+-=-.++++++.+++++.|+|.+.+..+|.|.++.|.|+|.|+|-|
T Consensus 1200 DgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvG 1279 (1381)
T KOG0054|consen 1200 DGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVG 1279 (1381)
T ss_pred cCeecccccHHHHHhcCeeeCCCCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChH
Confidence 99 36899999999999999999877788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHH
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||.+||||||+++++|++|||+|+++|++|-..|-+.+.. -+++|||.|.||++++-.+|||+|||+|+|+|.|+|.+
T Consensus 1280 QRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~ 1359 (1381)
T KOG0054|consen 1280 QRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAE 1359 (1381)
T ss_pred HHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHH
Confidence 99999999999999999999999999999998766444433 57999999999999999999999999999999999999
Q ss_pred HHhcCc-chHHHH
Q 037346 566 ILNSGT-DFMELV 577 (1156)
Q Consensus 566 l~~~~~-~~~~~~ 577 (1156)
|+++.. .|.+.+
T Consensus 1360 Ll~~~~S~f~~~l 1372 (1381)
T KOG0054|consen 1360 LLSDKDSLFSSLL 1372 (1381)
T ss_pred HHhCCcchHHHHH
Confidence 997644 444444
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.2e-49 Score=488.08 Aligned_cols=410 Identities=17% Similarity=0.209 Sum_probs=301.3
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
.+.++..++|.++++++++.|++||+++++|++++|++ .|+..+...+. .+..++..++.+++.+++++.++|+
T Consensus 75 ~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~-----~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~ 148 (547)
T PRK10522 75 LGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLT-----SDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPK 148 (547)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHH-----hhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 46688889999999999999999999999999999999 55555544332 3455667777788888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchH---HHHHHHHHHHHHHHhhHHHH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQE---LRFRDTNMKLIDEYSRPKFH 868 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e---~~~~~~~~~~~~~~~~~~~~ 868 (1156)
++++++..+++.+++..++.+..+...+...+..+...+++.|.++|+++++ ++.+ +.+.+++.+..++..+....
T Consensus 149 l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (547)
T PRK10522 149 MLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIR 227 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHH
Confidence 9887776666666565566665555555566778889999999999999996 4443 45667777666655443332
Q ss_pred HHHHHHHHHHHHHH----HHHHHH-------------HH-HHH---HHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCC
Q 037346 869 IAGAMEWLRFCIDM----LSSITF-------------AF-SLA---FLISVPNGIIHPYKNLERKIISVERILQCACIPS 927 (1156)
Q Consensus 869 ~~~~~~~~~~~l~~----~~~~~~-------------~~-~~~---~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~ 927 (1156)
.............. ...+.. .. .+. .+..+.........++.....+.+|+.++.+.++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~ 307 (547)
T PRK10522 228 ADTFHLSAVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPY 307 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 22111111100000 000000 00 000 0001111122223567778889999999865544
Q ss_pred CCcccccCCCCCCCCCCCCeEEEEEEEEEEcC--------------CCCceeeCCCCCCHHHHHHHHhhcccCCCceEEE
Q 037346 928 EPALVIEATKPNNSRPSHGEVNIRHLQVRYAP--------------NLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILI 993 (1156)
Q Consensus 928 e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~--------------~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~i 993 (1156)
+++.. ...+ -+..+.|+|+||+|+|+. |+.++|+|+||||||||+++|+|+|+|++|+|.+
T Consensus 308 ~~~~~--~~~~---~~~~~~i~~~~v~f~y~~~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~ 382 (547)
T PRK10522 308 KAEFP--RPQA---FPDWQTLELRNVTFAYQDNGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILL 382 (547)
T ss_pred ccccc--cccc---cCcCceEEEEEEEEEeCCCCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEE
Confidence 32211 1100 112357999999999963 2334677999999999999999999999999999
Q ss_pred cCeeCCCCChHHHhhcCeeeccccccccccchhccCCCCCCCHHHHHHHHHHcCCChHHHhhcCCc-----ccc------
Q 037346 994 DGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEEHADEQIWEALDKCQLGDEVRKKKGKL-----DSQ------ 1062 (1156)
Q Consensus 994 dG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~~~deei~~al~~~~l~~~i~~lp~gl-----~s~------ 1062 (1156)
||+|+++++.+++|+++++|||||++|++|+++| +...++++++++++++++.+++.. +++. .|+
T Consensus 383 ~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~G~~LSgGq~qRl 458 (547)
T PRK10522 383 DGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGRISNLKLSKGQKKRL 458 (547)
T ss_pred CCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999 345668899999999999988753 4331 122
Q ss_pred --ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc--CCceEEEeecCcccccccCEEEEEeCcEEeee-cChhHHh
Q 037346 1063 --GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF--SDCTVVTIAHRITSVLDSAMVLLLNHGLIKEY-DSPTKLL 1137 (1156)
Q Consensus 1063 --ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~-G~~~eLl 1137 (1156)
|||++++|+|||||||||+||+++++.|.+.+.+.. +++|+|+||||++++..||+|+||++|+++|. |++.+-+
T Consensus 459 ~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~~~~~ 538 (547)
T PRK10522 459 ALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEERDAA 538 (547)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCchhhh
Confidence 899999999999999999999999999999987654 48999999999999999999999999999987 5555544
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.8e-51 Score=466.47 Aligned_cols=423 Identities=25% Similarity=0.358 Sum_probs=315.7
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..++++|++++|+ ..++|+|+||++.+||++|++|.||||||||+|.|.|.|+|++|+|.++|+
T Consensus 7 ~ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~ 83 (500)
T COG1129 7 PLLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAA 83 (500)
T ss_pred ceeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhC
Confidence 3589999999997 568999999999999999999999999999999999999999999999995
Q ss_pred -EEEEecCCcCC-CccHHHHhhcCCCC-------CHH----HHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 423 -KAYVAQSPWIQ-SGKIEENILFGKEM-------DRE----RYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 423 -~~~v~Q~~~~~-~~ti~eni~~~~~~-------~~~----~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
|+.|+|++.++ +.||.|||.+|++. |.. +.+++++..++..+ ......+||+||||
T Consensus 84 GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-----------~~~~v~~LsiaqrQ 152 (500)
T COG1129 84 GIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-----------PDTLVGDLSIAQRQ 152 (500)
T ss_pred CcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-----------hhhhhhhCCHHHHH
Confidence 68999999875 56999999998753 222 33344444444311 23445679999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccCh-HH
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKY-SD 565 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~-~~ 565 (1156)
-|+||||+..+++|+|||||||+|+....+.+|+.+.. .+|.++|+|||+++.+. .||+|.||+||+.+..++. .+
T Consensus 153 ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~ 232 (500)
T COG1129 153 MVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAE 232 (500)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccC
Confidence 99999999999999999999999999999999987644 67999999999999875 5999999999999865431 11
Q ss_pred HHhcCcchHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcC
Q 037346 566 ILNSGTDFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKG 645 (1156)
Q Consensus 566 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g 645 (1156)
+-. .+++
T Consensus 233 ~~~-----~~lv-------------------------------------------------------------------- 239 (500)
T COG1129 233 TSE-----DELV-------------------------------------------------------------------- 239 (500)
T ss_pred CCH-----HHHH--------------------------------------------------------------------
Confidence 000 0000
Q ss_pred cccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037346 646 KVGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNKMH 725 (1156)
Q Consensus 646 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 725 (1156)
...
T Consensus 240 -----------~~M------------------------------------------------------------------ 242 (500)
T COG1129 240 -----------RLM------------------------------------------------------------------ 242 (500)
T ss_pred -----------HHh------------------------------------------------------------------
Confidence 000
Q ss_pred HHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 726 VCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIW 805 (1156)
Q Consensus 726 ~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~ 805 (1156)
.|+ +..
T Consensus 243 ---------------vGr------------~~~----------------------------------------------- 248 (500)
T COG1129 243 ---------------VGR------------ELE----------------------------------------------- 248 (500)
T ss_pred ---------------hCc------------chh-----------------------------------------------
Confidence 000 000
Q ss_pred HHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 037346 806 YQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSS 885 (1156)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 885 (1156)
..
T Consensus 249 -------------~~----------------------------------------------------------------- 250 (500)
T COG1129 249 -------------DL----------------------------------------------------------------- 250 (500)
T ss_pred -------------hh-----------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCCcee
Q 037346 886 ITFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLPLVL 965 (1156)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~~vL 965 (1156)
.+.. . ...+.++.... ..+...+ .|+||||.-++++-+.|
T Consensus 251 ------------~~~~--~------------------~~~~~~~~l~v------~~l~~~~--~~~dvSf~vr~GEIlGi 290 (500)
T COG1129 251 ------------FPEP--P------------------EEGIGEPVLEV------RNLSGGG--KVRDVSFTVRAGEILGI 290 (500)
T ss_pred ------------cccc--c------------------ccCCCCcEEEE------ecCCCCC--ceeCceeEEeCCcEEEE
Confidence 0000 0 00000000000 0111111 68999999999999899
Q ss_pred eCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCC-hHHHhhcCeeeccccc----cccccchhccCCC--C------
Q 037346 966 RGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIG-LHDLRTRLSIIPQDPT----MFEGTTRSNLDPL--E------ 1032 (1156)
Q Consensus 966 ~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~LR~~i~~VpQdp~----LF~gTIr~Nl~~~--~------ 1032 (1156)
-|-=|||+|-++.+|+|..++.+|+|.+||.++.--+ .+..+..|+|||-|-- +..-||++|+... .
T Consensus 291 aGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~ 370 (500)
T COG1129 291 AGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRG 370 (500)
T ss_pred eccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhcccc
Confidence 9999999999999999999999999999999887766 4478889999998763 4466999998642 1
Q ss_pred CCCH----HHHHHHHHHcCC-----ChHHHhhcCCcccc---ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc-C
Q 037346 1033 EHAD----EQIWEALDKCQL-----GDEVRKKKGKLDSQ---GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF-S 1099 (1156)
Q Consensus 1033 ~~~d----eei~~al~~~~l-----~~~i~~lp~gl~s~---ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~-~ 1099 (1156)
-.+. +...+..++.++ +.-+.+|.+|-... ||.|..+|+||||||||.++|.-+.+.|.+.|+++. +
T Consensus 371 ~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~ 450 (500)
T COG1129 371 LIDRRKERALAERYIRRLRIKTPSPEQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAE 450 (500)
T ss_pred ccChHHHHHHHHHHHHhcCcccCCccchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHC
Confidence 1121 122333333332 23344444444332 899999999999999999999999999999999876 5
Q ss_pred CceEEEeecCccccc-ccCEEEEEeCcEEeeecChh
Q 037346 1100 DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPT 1134 (1156)
Q Consensus 1100 ~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~ 1134 (1156)
|.+||+|+-.+..+. -||||+||.+|+|+..=+.+
T Consensus 451 G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~ 486 (500)
T COG1129 451 GKAILMISSELPELLGLSDRILVMREGRIVGELDRE 486 (500)
T ss_pred CCEEEEEeCChHHHHhhCCEEEEEECCEEEEEeccc
Confidence 799999999998766 79999999999999744433
No 100
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.5e-48 Score=434.78 Aligned_cols=428 Identities=22% Similarity=0.348 Sum_probs=323.0
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..++++++++.|+ +..+++||||++++||++||+|+||+|||||+++|.|+|+|++|+|.++|+
T Consensus 3 ~~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~ 79 (501)
T COG3845 3 PALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRL 79 (501)
T ss_pred ceEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHc
Confidence 3589999999997 567999999999999999999999999999999999999999999999995
Q ss_pred -EEEEecCCcCCC-ccHHHHhhcCCCC------C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 -KAYVAQSPWIQS-GKIEENILFGKEM------D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 -~~~v~Q~~~~~~-~ti~eni~~~~~~------~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
||+|.|++.+++ .||.|||.+|.+. + .++..+..+.++|.-+.+ ++...||=|||||
T Consensus 80 GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~-----------~~V~dLsVG~qQR 148 (501)
T COG3845 80 GIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPD-----------AKVADLSVGEQQR 148 (501)
T ss_pred CCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcc-----------ceeecCCcchhHH
Confidence 699999998875 5999999998752 2 345556666666654432 4556899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHH
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDIL 567 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 567 (1156)
|.|-+|||++|++||||||||.|-|...+++|+.+.. ..|+|||+|||.++.+.. ||++-||++|+++.. .+...
T Consensus 149 VEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt--~~~~~ 226 (501)
T COG3845 149 VEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGT--VDPVA 226 (501)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEee--ecCCC
Confidence 9999999999999999999999999999999987644 679999999999998765 999999999998632 21100
Q ss_pred h-cCcchHHHHHhhhhhccCCCCCCCCCcccccccccCCCCCCCcccchhcccccCCCCcccccCccCcchhHHHHhcCc
Q 037346 568 N-SGTDFMELVGAHKQALSGLDSIDRGPVSERKSINKENDGTSTTNEIVNKEENKNFQSDDEAALPKGQLVQEEEREKGK 646 (1156)
Q Consensus 568 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~ 646 (1156)
+ ...+..+++-.+.-
T Consensus 227 ~~t~~ela~lMvG~~v---------------------------------------------------------------- 242 (501)
T COG3845 227 ETTEEELAELMVGREV---------------------------------------------------------------- 242 (501)
T ss_pred CCCHHHHHHHhcCCcc----------------------------------------------------------------
Confidence 0 00000000000000
Q ss_pred ccHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhhhhhhhhhccccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037346 647 VGFSVYWKYMTTAYGGVLVPFILLAQIIFQIFQIGSNYWMAWATPVAKDVNPAVGASTLIIVYVGAGYKTATQLFNKMHV 726 (1156)
Q Consensus 647 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 726 (1156)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T COG3845 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 727 CIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQVLIVFVPVIATFIWY 806 (1156)
Q Consensus 727 ~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~ 806 (1156)
..+.. +....+|
T Consensus 243 ---~~~~~-~~~~~pg---------------------------------------------------------------- 254 (501)
T COG3845 243 ---VLRVV-KPPSTPG---------------------------------------------------------------- 254 (501)
T ss_pred ---ccccc-cCCCCCC----------------------------------------------------------------
Confidence 00000 0000000
Q ss_pred HHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 037346 807 QQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGAMEWLRFCIDMLSSI 886 (1156)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 886 (1156)
T Consensus 255 -------------------------------------------------------------------------------- 254 (501)
T COG3845 255 -------------------------------------------------------------------------------- 254 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCCCcccccCCCCCCCCCCCCeEEEEEEEEEEcCCCCceee
Q 037346 887 TFAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSEPALVIEATKPNNSRPSHGEVNIRHLQVRYAPNLPLVLR 966 (1156)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~~~vL~ 966 (1156)
++-...+.-..+ +..|...+++|||..+.++-+.+-
T Consensus 255 -----------------------------------------~~vL~V~~L~v~---~~~~~~~v~~vs~~Vr~GEIvGIA 290 (501)
T COG3845 255 -----------------------------------------EVVLEVEDLSVK---DRRGVTAVKDVSFEVRAGEIVGIA 290 (501)
T ss_pred -----------------------------------------CeEEEEeeeEee---cCCCCceeeeeeeEEecCcEEEEE
Confidence 000000000001 123456899999999999999999
Q ss_pred CCCCCCHHHHHHHHhhcccCCCceEEEcCeeC-CCCChHHHhh-cCeeeccccc----cccccchhccCCCCC-------
Q 037346 967 GRTGSGKSTLIQTLFRIVESTAGHILIDGKDI-SLIGLHDLRT-RLSIIPQDPT----MFEGTTRSNLDPLEE------- 1033 (1156)
Q Consensus 967 G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di-~~i~~~~LR~-~i~~VpQdp~----LF~gTIr~Nl~~~~~------- 1033 (1156)
|-.|-|-|-|+.+|.|+..|.+|+|.++|.|+ ...+....|+ .+++||.|.+ ..+-|+.||+-+...
T Consensus 291 GV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~ 370 (501)
T COG3845 291 GVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSR 370 (501)
T ss_pred ecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhcccccccc
Confidence 99999999999999999999999999999997 6778887775 5999999984 557799999853211
Q ss_pred ---CCHHHHHHHH----HHc-----CCChHHHhhcCCcccc---ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc
Q 037346 1034 ---HADEQIWEAL----DKC-----QLGDEVRKKKGKLDSQ---GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF 1098 (1156)
Q Consensus 1034 ---~~deei~~al----~~~-----~l~~~i~~lp~gl~s~---ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~ 1098 (1156)
..-.++.+.+ ++. +.+.-+.+|.+|-... ||-|.++|++||..+||-+||..+.+.|.+.|.+..
T Consensus 371 ~g~l~~~~i~~~a~~li~~fdVr~~~~~~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r 450 (501)
T COG3845 371 GGFLDRRAIRKFARELIEEFDVRAPSPDAPARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELR 450 (501)
T ss_pred ccccCHHHHHHHHHHHHHHcCccCCCCCcchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHH
Confidence 1123333322 222 2222334444443332 899999999999999999999999999999987764
Q ss_pred -CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhH
Q 037346 1099 -SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTK 1135 (1156)
Q Consensus 1099 -~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~e 1135 (1156)
+|+.|++|+-+|+.+. -||||.||.+|+|+....+++
T Consensus 451 ~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 451 DAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred hcCCEEEEEehhHHHHHHhhheeeeeeCCceeccccccc
Confidence 6889999999998876 499999999999999888776
No 101
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=7.8e-46 Score=412.64 Aligned_cols=418 Identities=19% Similarity=0.213 Sum_probs=290.7
Q ss_pred HHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 713 GYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQV 792 (1156)
Q Consensus 713 ~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 792 (1156)
+.+.-.++..+.|...+++|.. .+..|+=..-+ .|.+.+..++...-...+...=.+-..+.+++.+.|++
T Consensus 91 g~~lD~~L~~~v~~a~~~~~l~---~~~~g~~~Q~L------rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~l 161 (580)
T COG4618 91 GERLDRQLNGPVFAASFSAPLL---RRGSGDGLQPL------RDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWL 161 (580)
T ss_pred HHHHHHHhccHHHHHHHhhHHh---hcCCCccccch------hhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHH
Confidence 4444555555666666655543 23344333333 45555554443311111111112233445556666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHH
Q 037346 793 LIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGA 872 (1156)
Q Consensus 793 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 872 (1156)
.++.+...++.+.+...-....++--+...+.......+..-+.++.++|++.|+.....++|.+....+....-...-.
T Consensus 162 G~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~ 241 (580)
T COG4618 162 GLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDR 241 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 55444333333322222222233333334445556677888899999999999999988888887766655444332222
Q ss_pred H-------HHHHHHHHHHHH---------------HHHHHHHHH--HHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCC
Q 037346 873 M-------EWLRFCIDMLSS---------------ITFAFSLAF--LISVPNGIIHPYKNLERKIISVERILQCACIPSE 928 (1156)
Q Consensus 873 ~-------~~~~~~l~~~~~---------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e 928 (1156)
. +.+-..++.... +.++.++.. ...+....+..+..+..+..|..|+.+.+...++
T Consensus 242 ~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~ 321 (580)
T COG4618 242 NGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPA 321 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 2 222222221110 000000000 1111222333446677788899999998765443
Q ss_pred CcccccCCCC---------CCCCCCCCeEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCC
Q 037346 929 PALVIEATKP---------NNSRPSHGEVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDIS 999 (1156)
Q Consensus 929 ~~~~~~~~~~---------~~~~p~~g~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~ 999 (1156)
.....+.+.| ....|......+++++|+..+++-+++.||||||||||.++|.|.+.|.+|.|.+||-|++
T Consensus 322 ~~~~m~LP~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~ 401 (580)
T COG4618 322 AAERMPLPAPQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLR 401 (580)
T ss_pred ccCCCCCCCCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhh
Confidence 3221111111 1112444567889999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHhhcCeeeccccccccccchhccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc----------------
Q 037346 1000 LIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ---------------- 1062 (1156)
Q Consensus 1000 ~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~---------------- 1062 (1156)
+++.++|-++|||.|||..||+|||+|||.-++ +.+++.|.+|++.++.||.|..+|+||||.
T Consensus 402 qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRI 481 (580)
T COG4618 402 QWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRI 481 (580)
T ss_pred cCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHH
Confidence 999999999999999999999999999997655 666788999999999999999999999986
Q ss_pred --ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc-CCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1063 --GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF-SDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1063 --ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
||||+.+|++++||||-||||.+-|+.+.++|.+.. +++|+|+||||.+.+..+|+|+||++|++..+|+-+|.+++
T Consensus 482 aLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 482 ALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred HHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 799999999999999999999999999999998764 68999999999999999999999999999999999999875
No 102
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-47 Score=382.80 Aligned_cols=200 Identities=31% Similarity=0.444 Sum_probs=179.7
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.|+++|++++|+ +..+|+|||++|++||.++|+|||||||||||++|.|+-+|++|+|.++|.
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 489999999996 567999999999999999999999999999999999999999999999993
Q ss_pred EEEEecCCcCCCc-cHHHHhhcCCC--------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 KAYVAQSPWIQSG-KIEENILFGKE--------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~-ti~eni~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
+|+|+|+..||+. |+.|||.++.- ..+++..+.++..+|.+..+.+| .+|||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 5799999999865 99999998731 22355667888999988887777 5899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHhcC
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
||||+-+|+++|+|||||||||+...++.+.+.. ..|.|.|+|||++.+.+. ||||++|++|+|+++|+++++..+.
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 9999999999999999999999999988776543 679999999999999986 9999999999999999999988643
No 103
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2.2e-43 Score=438.01 Aligned_cols=391 Identities=14% Similarity=0.114 Sum_probs=302.8
Q ss_pred HHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 037346 714 YKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSL-VAWQV 792 (1156)
Q Consensus 714 ~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 792 (1156)
.+..+.+|++.+++....++.|||+ ++|++++|++ .|+..+...+...+..++..++.+++.++.++. .+|.+
T Consensus 168 ~~l~~~l~~~~~~~~~~~~~~~~d~-~~g~~~srlt-----~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l 241 (659)
T TIGR00954 168 VRLTRYLYSKYLSGFTFYKVSNLDS-RIQNPDQLLT-----QDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVG 241 (659)
T ss_pred HHHHHHHHHHHhCCCceEEeccCCC-CCCCccccHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 4566777777788878888889987 7899999999 777777777777788888888888877777775 88988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHHHHHHHHHHHHHHhhHHHHHHHH
Q 037346 793 LIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELRFRDTNMKLIDEYSRPKFHIAGA 872 (1156)
Q Consensus 793 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 872 (1156)
+++++.++++..++.+++.+..+.+.+......+.+.+.+.|.++|+++||+|+.|+.+.+++.+..++..+........
T Consensus 242 ~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~ 321 (659)
T TIGR00954 242 PAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKF 321 (659)
T ss_pred HHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777788888888888888888888899999999999999999999999999999999999888888777766666
Q ss_pred HHHHHHHHHHHHHHH---H-HHHHHH-HH------------------------------HcCCCccchHHHHHHHhHHHH
Q 037346 873 MEWLRFCIDMLSSIT---F-AFSLAF-LI------------------------------SVPNGIIHPYKNLERKIISVE 917 (1156)
Q Consensus 873 ~~~~~~~l~~~~~~~---~-~~~~~~-~~------------------------------~~~~~~~~~~~~~~~~~~s~~ 917 (1156)
..++....+++.... + .+.... .+ .+.........++.....+.+
T Consensus 322 ~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~ 401 (659)
T TIGR00954 322 RFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTA 401 (659)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655555544432210 0 000000 00 000111122256777888999
Q ss_pred HHHHhhcCCCCCcc------cccC-CC-----------C--CCCCCCCCeEEEEEEEEEEcCC--------------CCc
Q 037346 918 RILQCACIPSEPAL------VIEA-TK-----------P--NNSRPSHGEVNIRHLQVRYAPN--------------LPL 963 (1156)
Q Consensus 918 Ri~~~~~~~~e~~~------~~~~-~~-----------~--~~~~p~~g~I~~~~Vsf~Y~~~--------------~~~ 963 (1156)
|+.++.+.+++... ..+. .. + .......+.|+++||+|+|+.+ +.+
T Consensus 402 Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~~~il~~isl~i~~Ge~~ 481 (659)
T TIGR00954 402 RVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNGDVLIESLSFEVPSGNHL 481 (659)
T ss_pred HHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCCCeeeecceEEECCCCEE
Confidence 99998864332100 0000 00 0 0000123568899999988532 334
Q ss_pred eeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhccCCCC--------CCC
Q 037346 964 VLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE--------EHA 1035 (1156)
Q Consensus 964 vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~--------~~~ 1035 (1156)
+|.|+||||||||+++|+|+++|++|+|.+|+ |+++++|||+|.+|++|++|||.+.. ..+
T Consensus 482 ~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~ 550 (659)
T TIGR00954 482 LICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLS 550 (659)
T ss_pred EEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCC
Confidence 56699999999999999999999999999874 67899999999999999999997642 356
Q ss_pred HHHHHHHHHHcCCChHHHhhcCCcccc-----------------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc
Q 037346 1036 DEQIWEALDKCQLGDEVRKKKGKLDSQ-----------------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF 1098 (1156)
Q Consensus 1036 deei~~al~~~~l~~~i~~lp~gl~s~-----------------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~ 1098 (1156)
+++++++++.+++++++.. |.|+|+. |||++++|++||||||||+||+++++.+++.+++.
T Consensus 551 ~~~i~~~l~~~~l~~~~~~-~~g~~~~~~~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~- 628 (659)
T TIGR00954 551 DKDLEQILDNVQLTHILER-EGGWSAVQDWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF- 628 (659)
T ss_pred HHHHHHHHHHcCCHHHHhh-cCCcccccccccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc-
Confidence 8899999999999999876 7776643 89999999999999999999999999999999875
Q ss_pred CCceEEEeecCcccccccCEEEEEeC
Q 037346 1099 SDCTVVTIAHRITSVLDSAMVLLLNH 1124 (1156)
Q Consensus 1099 ~~~TvI~IaHrl~ti~~~D~I~Vl~~ 1124 (1156)
++|+|+||||++++..||+|++|+.
T Consensus 629 -~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 629 -GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred -CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 8999999999999999999999973
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-44 Score=409.92 Aligned_cols=262 Identities=24% Similarity=0.321 Sum_probs=216.9
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCccEEEeeeEEEeCCC
Q 037346 291 IPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGNSDTAIEIIDGSFSWDFS 370 (1156)
Q Consensus 291 ~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~ 370 (1156)
+.+++..+|+.+++|+.+..++..+|..... ..|+..|+..++.+..... ...+..+.|+++|++++|+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~nls~~y~~- 92 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLK--EDFNHANVFEIRNFNFWYMN- 92 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhccccccccccccc--CCCCcCceEEEEeeEEEecC-
Confidence 4688999999999999999998877765433 5689999876553221101 11123457999999999963
Q ss_pred CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC---------------eEEEEecCC
Q 037346 371 SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG---------------TKAYVAQSP 430 (1156)
Q Consensus 371 ~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g---------------~~~~v~Q~~ 430 (1156)
...++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++| .++||||+|
T Consensus 93 ~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~ 172 (329)
T PRK14257 93 RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKP 172 (329)
T ss_pred CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCC
Confidence 23579999999999999999999999999999999999996 5799998866 368999999
Q ss_pred cCCCccHHHHhhcCCC---CC-HH----HHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 431 WIQSGKIEENILFGKE---MD-RE----RYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 431 ~~~~~ti~eni~~~~~---~~-~~----~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
|+|++|++|||.|+.. .+ ++ .++++++.|+|.+++ ++.++++|.+||||||||++||||++++|+
T Consensus 173 ~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l-------~~~~~~~~~~LSgGqkqRl~LARAl~~~p~ 245 (329)
T PRK14257 173 TPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEV-------KDDLDKAGNALSGGQQQRLCIARAIALEPE 245 (329)
T ss_pred ccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchh-------hhhhhCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 9999999999998743 22 22 266778888875543 367889999999999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHhc
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
||||||||++||+++.+++.+.+.. .+++|+|+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 246 IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 246 VLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999987665533 457999999999999876 999999999999999999998754
No 105
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-44 Score=377.27 Aligned_cols=203 Identities=27% Similarity=0.387 Sum_probs=178.9
Q ss_pred cEEEeeeEEEeCCC--CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------
Q 037346 357 AIEIIDGSFSWDFS--SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~--~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------- 421 (1156)
.|+++++++.|+.. +...+|+|+||+|++||+.+|+|.||+|||||+++|.++-.|++|+|.++|
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 37899999999852 124689999999999999999999999999999999999999999999999
Q ss_pred ---eEEEEecCCcCCC-ccHHHHhhcCCCC---C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 422 ---TKAYVAQSPWIQS-GKIEENILFGKEM---D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 422 ---~~~~v~Q~~~~~~-~ti~eni~~~~~~---~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
+||+++|++.+++ .||.+||.|..+. + ++|..+.++..+|.+..+..| .+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhH
Confidence 3799999999887 6999999997542 1 345666777778876665555 7999999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHH
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 566 (1156)
|+|||||..+|+|||.|||||||||++.+.|.+.+.. .-|-|+++|||.++.++. ||||.+|++|+++++|+..++
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 9999999999999999999999999999999886643 458999999999999986 999999999999999999998
Q ss_pred HhcC
Q 037346 567 LNSG 570 (1156)
Q Consensus 567 ~~~~ 570 (1156)
....
T Consensus 230 F~~P 233 (339)
T COG1135 230 FANP 233 (339)
T ss_pred hcCc
Confidence 8654
No 106
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-43 Score=369.85 Aligned_cols=185 Identities=35% Similarity=0.426 Sum_probs=165.9
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------EEEEec
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------KAYVAQ 428 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------~~~v~Q 428 (1156)
.++++++++.|+. ..+|+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|+ ++||+|
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 4889999999973 68999999999999999999999999999999999999999999999984 699999
Q ss_pred CCcCCC-ccHHHHhhcCCCC-------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 429 SPWIQS-GKIEENILFGKEM-------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 429 ~~~~~~-~ti~eni~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
++.+++ -||+|||.|+.+. ..++..+.++.++|..+-+.+| .+|||||||||||||||+.+
T Consensus 80 ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARAL~~~ 148 (248)
T COG1116 80 EDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARALATR 148 (248)
T ss_pred cCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHHHhcC
Confidence 998776 5999999998653 2356788999999988877766 68999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEeCC
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIKDG 555 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~~G 555 (1156)
|++|||||||+|||+.|+.++.+.+.. ..++|+++||||++.. ..+|||++|.++
T Consensus 149 P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 149 PKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred CCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999988776543 5679999999999885 569999999983
No 107
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-44 Score=364.78 Aligned_cols=199 Identities=30% Similarity=0.412 Sum_probs=175.3
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~ 424 (1156)
|+|+|+|+.|. ++.+++|+||+|++||+++++|||||||||+|++|.++++|++|+|+++|. +|
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999996 568999999999999999999999999999999999999999999999993 79
Q ss_pred EEecCCcCCC-ccHHHHhhcCCC---CCH----HHHHHHHHHhCCch--hhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 425 YVAQSPWIQS-GKIEENILFGKE---MDR----ERYERVLEACSLKK--DLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 425 ~v~Q~~~~~~-~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~--~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
||-|..-+|+ .||.|||.+-.. +++ ++.++.++..+|++ ...+.| .+|||||+|||.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHH
Confidence 9999998875 599999987532 443 45667888888875 344444 78999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
|||..+|+|+|+||||+||||.++..+-+.+.. .-++|+|+||||++.. +.+|||.+|++|++++.++|++++.+.
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999988665533 4589999999999874 679999999999999999999998754
No 108
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1e-42 Score=385.57 Aligned_cols=220 Identities=28% Similarity=0.356 Sum_probs=199.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------eE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------TK 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------~~ 423 (1156)
.|+++|++++|+.. +.++|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++| .+
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 48999999999632 3579999999999999999999999999999999999998 789999998 37
Q ss_pred EEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCe
Q 037346 424 AYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADI 503 (1156)
Q Consensus 424 ~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~i 503 (1156)
+|+||+|++|++|+++|+.......++++.++++.++|.+.+..+|.++++.++++|.+||||||||++||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999964444667788899999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHHHHH
Q 037346 504 FLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFMELVG 578 (1156)
Q Consensus 504 lllDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 578 (1156)
+||||||++||+.+.+.+.+.+.. .+++|+|+|||+++.+..||+|++|++|++++.|+++++.+....|..++.
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~ 235 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAIS 235 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHh
Confidence 999999999999999888776654 457999999999998888999999999999999999999986655666554
No 109
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.6e-43 Score=372.53 Aligned_cols=199 Identities=32% Similarity=0.479 Sum_probs=176.4
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------eE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------TK 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------~~ 423 (1156)
.++++|++|+|+ ++++++|+||++++||+++|+|||||||||||++|+|.++|.+|+|.++| ++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 478999999996 56899999999999999999999999999999999999999999999999 47
Q ss_pred EEEecCCcC-CCccHHHHhhcCCC-----------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 424 AYVAQSPWI-QSGKIEENILFGKE-----------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 424 ~~v~Q~~~~-~~~ti~eni~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
|||||++.. +..||+|-+.+|+. .|.+...++++.+++.+..+ +...+||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~-----------r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLAD-----------RPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhc-----------CcccccChhHHHHH
Confidence 999999865 45699999999852 13345677788888876553 34568999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEeCCeEEEccChHHHH
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIKDGKITQAGKYSDIL 567 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~ 567 (1156)
.|||||+++|++++||||||+||...+.++++.+.. .+|+|+|+|+||++.. +.||++++|++|+++.+|++++.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 999999999999999999999999999999887644 5689999999999985 679999999999999999999887
Q ss_pred hc
Q 037346 568 NS 569 (1156)
Q Consensus 568 ~~ 569 (1156)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 53
No 110
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-42 Score=363.45 Aligned_cols=199 Identities=30% Similarity=0.473 Sum_probs=174.3
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC----------eEEE
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG----------TKAY 425 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g----------~~~~ 425 (1156)
..|+++|++|+|.. . ++|+|+||++++|++++|+||||||||||+++|+|+++|.+|+|.+.| +|||
T Consensus 3 ~~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgY 79 (254)
T COG1121 3 PMIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGY 79 (254)
T ss_pred cEEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEE
Confidence 35899999999963 2 699999999999999999999999999999999999999999999876 4899
Q ss_pred EecCC---cCCCccHHHHhhcCCCC-----------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 426 VAQSP---WIQSGKIEENILFGKEM-----------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 426 v~Q~~---~~~~~ti~eni~~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
|||.. |-|+.||+|-+.+|... |.+..+++++..++.+..+ +...+|||||+|||
T Consensus 80 VPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~-----------r~i~~LSGGQ~QRV 148 (254)
T COG1121 80 VPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRD-----------RQIGELSGGQKQRV 148 (254)
T ss_pred cCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhC-----------CcccccCcHHHHHH
Confidence 99964 67889999999988431 3477888999999875443 45568999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
.|||||+++|++|+|||||+++|+.++..+++.+.. .+|+||++||||++.+. .+|+|+.|+ +++...|++++..+
T Consensus 149 ~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~ 227 (254)
T COG1121 149 LLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLT 227 (254)
T ss_pred HHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccC
Confidence 999999999999999999999999999999887643 45999999999999875 699999996 57788899998875
Q ss_pred c
Q 037346 569 S 569 (1156)
Q Consensus 569 ~ 569 (1156)
.
T Consensus 228 ~ 228 (254)
T COG1121 228 E 228 (254)
T ss_pred H
Confidence 3
No 111
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-41 Score=348.57 Aligned_cols=205 Identities=28% Similarity=0.405 Sum_probs=178.3
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------ 422 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------ 422 (1156)
...|++++++++|. ++.+++|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.
T Consensus 6 ~~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 35799999999996 578999999999999999999999999999999999999999999999983
Q ss_pred ----EEEEecCCcCCCc-cHHHHhhcCC----CCCHHHH----HHHHHHhCCchh-hhhCCCCCccccccCCCCCCHHHH
Q 037346 423 ----KAYVAQSPWIQSG-KIEENILFGK----EMDRERY----ERVLEACSLKKD-LEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 ----~~~v~Q~~~~~~~-ti~eni~~~~----~~~~~~~----~~~~~~~~l~~~-~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
+|+++|...+|+. ||+||+.|.. ..+++.+ ..-++.++|... .+.+| ++||||++
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~ 151 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMR 151 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHH
Confidence 6999999999976 9999999963 2344433 345778899887 66666 68999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYS 564 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 564 (1156)
.|+|||||+..||+++++||||++|||.+...+-+.+.. .-|.|+|+||||++.+. .||+|+++.||+|+..|+++
T Consensus 152 KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~ 231 (263)
T COG1127 152 KRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPE 231 (263)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHH
Confidence 999999999999999999999999999998766444332 34789999999998875 59999999999999999999
Q ss_pred HHHhcCcch
Q 037346 565 DILNSGTDF 573 (1156)
Q Consensus 565 ~l~~~~~~~ 573 (1156)
++.+....+
T Consensus 232 el~~sd~P~ 240 (263)
T COG1127 232 ELLASDDPW 240 (263)
T ss_pred HHHhCCCHH
Confidence 998765543
No 112
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=347.23 Aligned_cols=204 Identities=25% Similarity=0.360 Sum_probs=177.5
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCC-----cEEEEcCe--------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKES-----GIIRLCGT-------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~-----G~i~~~g~-------- 422 (1156)
..++++|+++.|+ ++.+|+|||++|++++++|++|||||||||||+++.+..+..+ |+|.++|+
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 4689999999996 5689999999999999999999999999999999999988765 99999984
Q ss_pred -------EEEEecCCcCCCccHHHHhhcCCCC-------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 423 -------KAYVAQSPWIQSGKIEENILFGKEM-------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 -------~~~v~Q~~~~~~~ti~eni~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
+|+|+|.|.-|+.||+|||.+|... -++.+++.++.++|.+..+. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 6999999999999999999998532 13557778888888765432 23466788999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||+||||||.-+|+|||||||||||||.+..+|.+.+.. .++-|+|+|||+++... .+|+..++.+|+++|.|+.+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 999999999999999999999999999999988766554 35679999999999875 5999999999999999999998
Q ss_pred Hhc
Q 037346 567 LNS 569 (1156)
Q Consensus 567 ~~~ 569 (1156)
..+
T Consensus 236 F~~ 238 (253)
T COG1117 236 FTN 238 (253)
T ss_pred hcC
Confidence 764
No 113
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2.7e-41 Score=378.62 Aligned_cols=172 Identities=19% Similarity=0.319 Sum_probs=137.4
Q ss_pred CeEEEEEEEEEEcCC--------------CCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCe
Q 037346 946 GEVNIRHLQVRYAPN--------------LPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLS 1011 (1156)
Q Consensus 946 g~I~~~~Vsf~Y~~~--------------~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~ 1011 (1156)
..|.|+||+|+|+++ .+++++||+|+|||||++++.|...|+.|.|.-.-. .+++
T Consensus 388 pvi~~~nv~F~y~~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~~ 456 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSDNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKLP 456 (614)
T ss_pred CeEEEeccccCCCCcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccch
Confidence 358899999988643 456889999999999999999999999998865422 1233
Q ss_pred eecc---ccccccccchhccCC-CC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc--------ccccccCCCEEEEecC
Q 037346 1012 IIPQ---DPTMFEGTTRSNLDP-LE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ--------GRVLLKKSKVLVLDEA 1078 (1156)
Q Consensus 1012 ~VpQ---dp~LF~gTIr~Nl~~-~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~--------ARALLr~~~ILiLDEa 1078 (1156)
.-.| +...++-|.-++..+ +. ....+++...|.++||....+..|-...|. ||.+++.|.|||||||
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kqP~lLlLDEP 536 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQPHLLLLDEP 536 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccchhhcccccchhHHHHHHHhcCCcEEEecCC
Confidence 3334 334566677777654 23 245688999999999987666655554444 7999999999999999
Q ss_pred CcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEeee
Q 037346 1079 TASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEY 1130 (1156)
Q Consensus 1079 TS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~ 1130 (1156)
|++||.+|-....++|.++ ..+||+|+|+...|.. +++|++.+||++...
T Consensus 537 tnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 537 TNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred CcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 9999999999999999887 6799999999999876 889999999988764
No 114
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-42 Score=361.73 Aligned_cols=200 Identities=31% Similarity=0.454 Sum_probs=177.8
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.|.++|+++.|+ ..++++|||++|+.||.+|+.|||||||||||++|+|+..|+.|.|.++|+
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 478889999996 467899999999999999999999999999999999999999999999995
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCC---------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKE---------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
||||+|+..+|. .||.|||.||.. ..+.+..+.++.|+|+..-+..| .+||||||||||
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHHH
Confidence 699999998875 699999999963 23457778899999987666555 689999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEeCCeEEEccChHHHHh
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||||..+|++||||||++|||++.++.+-..+.. .-|.|+++||||.+.. +.||+|++|++|+|...|+++|+..
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 99999999999999999999999999988776643 4588999999999886 5699999999999999999999976
Q ss_pred cC
Q 037346 569 SG 570 (1156)
Q Consensus 569 ~~ 570 (1156)
..
T Consensus 228 ~P 229 (345)
T COG1118 228 HP 229 (345)
T ss_pred CC
Confidence 43
No 115
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-41 Score=377.29 Aligned_cols=200 Identities=32% Similarity=0.414 Sum_probs=177.7
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAY 425 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~ 425 (1156)
.|+++|+++.|+. ..+++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++|+ +|+
T Consensus 3 ~i~l~~v~K~yg~---~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 3 ELELKNVRKSFGS---FEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred EEEEeeeEEEcCC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 5899999999962 22999999999999999999999999999999999999999999999994 799
Q ss_pred EecCCcCCCc-cHHHHhhcCCCC-------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 426 VAQSPWIQSG-KIEENILFGKEM-------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 426 v~Q~~~~~~~-ti~eni~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
|+|+..+++. ||+|||.|+... .+++++++.+.+++++.+++.| .+|||||||||||||||
T Consensus 80 VFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 80 VFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALARAL 148 (338)
T ss_pred EeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHHHH
Confidence 9999998764 999999998653 2567888999999988887655 68999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
.++|+++|||||+|+||++.+..+...+.. .-|.|+|.||||...+ ..+|+|++|++|+|.+.|++.++.+..
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 999999999999999999998877655432 4578999999998765 569999999999999999999998653
No 116
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=9e-42 Score=332.16 Aligned_cols=196 Identities=31% Similarity=0.433 Sum_probs=174.4
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAYV 426 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~v 426 (1156)
+.+++++|+|... =-..+++|++||++||+||||||||||+++|+|+..|.+|+|.++|. ++++
T Consensus 2 l~L~~V~~~y~~~-----~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 2 LALDDVRFSYGHL-----PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred ccccceEEeeCcc-----eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 5678999999632 23578999999999999999999999999999999999999999994 5899
Q ss_pred ecCCcCCCc-cHHHHhhcCCC-------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 427 AQSPWIQSG-KIEENILFGKE-------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 427 ~Q~~~~~~~-ti~eni~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
+|+..+|.. ||.+||.+|.. .+.++++.++...+|....+++| .+||||||||+||||+|.
T Consensus 77 FQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARclv 145 (231)
T COG3840 77 FQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARCLV 145 (231)
T ss_pred hhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHHHh
Confidence 999999975 99999999953 34678888999999999999988 489999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
++-+|++||||||+|||.-+.++...+.. .++.|+++|||+++.+. .+|+++++++|+|.++|+.+++...
T Consensus 146 R~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 146 REQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred ccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 99999999999999999999887665432 57899999999999876 5999999999999999999988754
No 117
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-42 Score=381.33 Aligned_cols=201 Identities=33% Similarity=0.435 Sum_probs=178.8
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EE
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KA 424 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~ 424 (1156)
..++++|++++|. +..+++|+||+|++||+++++|||||||||+|++|+|+..|++|+|.++|+ ++
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 4699999999996 568999999999999999999999999999999999999999999999995 69
Q ss_pred EEecCCcCCC-ccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHH
Q 037346 425 YVAQSPWIQS-GKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIAR 495 (1156)
Q Consensus 425 ~v~Q~~~~~~-~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAr 495 (1156)
+|+|+..||+ .||+|||.||.. .. ++++.++++..+|.+..++ ++.+|||||+|||||||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R-----------~p~qLSGGQqQRVALAR 149 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADR-----------KPHQLSGGQQQRVALAR 149 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhh-----------ChhhhChHHHHHHHHHH
Confidence 9999999886 599999999965 12 2477888888888776554 44799999999999999
Q ss_pred hhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCc-cccCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 496 PLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEF-LPAADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 496 al~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~-~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
||..+|++||||||+||||.+.+.++...+.. ..|.|.|+||||.+. +..+|||++|++|+|.+.|+++|+....
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999888665532 458999999999876 5679999999999999999999998654
No 118
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.6e-41 Score=376.04 Aligned_cols=203 Identities=36% Similarity=0.624 Sum_probs=189.2
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSN 1027 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~N 1027 (1156)
..++||+|...+++.++|.|+||||||||+++|+|+++ .+|+|++||+++..++...+|++|+||||+|.+|++|+++|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~~tv~~n 96 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFSGTFRKN 96 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEEEECCCcccchhhHHHH
Confidence 35777777777787788999999999999999999998 79999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHHHH
Q 037346 1028 LDPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATDNQ 1089 (1156)
Q Consensus 1028 l~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te~~ 1089 (1156)
++++...++++++++++.+++.+++..+|+++++. |||++++|+||||||||++||+++++.
T Consensus 97 l~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~ 176 (275)
T cd03289 97 LDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQV 176 (275)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHH
Confidence 99877778899999999999999999999986642 899999999999999999999999999
Q ss_pred HHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHHHh
Q 037346 1090 IQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAEYT 1152 (1156)
Q Consensus 1090 I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~~~ 1152 (1156)
+++.|++.++++|+|+||||++++..||||+||++|+|+|.|+|++|+++ ++.|++++.+..
T Consensus 177 l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 238 (275)
T cd03289 177 IRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPSD 238 (275)
T ss_pred HHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhcc
Confidence 99999998889999999999999999999999999999999999999985 689999998655
No 119
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.8e-41 Score=350.66 Aligned_cols=191 Identities=31% Similarity=0.428 Sum_probs=163.9
Q ss_pred EEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 358 IEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
++++|+++.|.... ...+|+++||+|++||+++|+|||||||||||++|.|+..|++|.|.++|.
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 247899999999999999999999999999999999999999999999983
Q ss_pred ---EEEEecCCcCC-CccHHHHhhcC----CCC---CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 423 ---KAYVAQSPWIQ-SGKIEENILFG----KEM---DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 423 ---~~~v~Q~~~~~-~~ti~eni~~~----~~~---~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
+|||+|+..+. +.|++|||.+. ... ..++.+..++..+|.+... ..++.+|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 79999999865 56999999953 221 2455667777778876554 123468999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEeCCeEE
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIKDGKIT 558 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~ 558 (1156)
||||||+.+|++++.||||++||.++.+.+++.+.. ..|+|+|+||||......|||++.|+||++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999887644 4588999999999999999999999999954
No 120
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=8.6e-40 Score=363.65 Aligned_cols=236 Identities=37% Similarity=0.624 Sum_probs=200.9
Q ss_pred HHHHHhccCCCCccccccCCCCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCC
Q 037346 331 RIASFLCLEGLQTDVLEKMPRGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGV 410 (1156)
Q Consensus 331 Ri~~fl~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~ 410 (1156)
.+.+.|..+...... .+. ......|+++|+++.+ +++|+|+||+|++||+++|+|+||||||||+++|+|++
T Consensus 16 ~~~~~~~~~~~~~~~-~~~--~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~ 87 (282)
T cd03291 16 GFGELLEKAKQENND-RKH--SSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGEL 87 (282)
T ss_pred HHHHHHhcccccccc-ccc--CCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 456666554322211 112 2234579999999952 46999999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCeEEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 411 PKESGIIRLCGTKAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 411 ~~~~G~i~~~g~~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
+|++|+|.++|.++|++|++++++.|++||+.++......++...++++++.+.+..+|.+.++.+++++.+||||||||
T Consensus 88 ~p~~G~I~i~g~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qr 167 (282)
T cd03291 88 EPSEGKIKHSGRISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRAR 167 (282)
T ss_pred CCCCcEEEECCEEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHH
Confidence 99999999999999999999999999999999876555556677788889988888899998899999999999999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHh
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
++|||||+.+|+++||||||++||+.++..+.+.++. .+++|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 168 v~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 247 (282)
T cd03291 168 ISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQS 247 (282)
T ss_pred HHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999888775432 35789999999999888899999999999999999998875
Q ss_pred cCcchH
Q 037346 569 SGTDFM 574 (1156)
Q Consensus 569 ~~~~~~ 574 (1156)
....+.
T Consensus 248 ~~~~~~ 253 (282)
T cd03291 248 LRPDFS 253 (282)
T ss_pred cchHHH
Confidence 433343
No 121
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.7e-40 Score=361.38 Aligned_cols=217 Identities=29% Similarity=0.405 Sum_probs=191.6
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~ 424 (1156)
++++|+++.|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4689999999632 357999999999999999999999999999999999999999999999882 79
Q ss_pred EEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCe
Q 037346 425 YVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADI 503 (1156)
Q Consensus 425 ~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~i 503 (1156)
|++|++++++.|++||+.++.. ...++..+.++..++.+.++.+|.|.++..++++.+|||||||||+||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999998999999998653 344455566677788888888998988888999999999999999999999999999
Q ss_pred eeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCcchHH
Q 037346 504 FLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGTDFME 575 (1156)
Q Consensus 504 lllDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 575 (1156)
+||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+..||++++|++|++++.|+++++.+..+.|..
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 232 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAY 232 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHH
Confidence 999999999999999998887644 358999999999999877999999999999999999998866544444
No 122
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-41 Score=342.58 Aligned_cols=198 Identities=31% Similarity=0.434 Sum_probs=172.6
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------- 421 (1156)
.|+++|++..|| +++.+|+||||+|++||+++|+|+|||||||||++|.|+.+|++|+|.++|
T Consensus 3 ~i~~~nl~k~yp--~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYP--GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecC--CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 589999999998 367899999999999999999999999999999999999999999999998
Q ss_pred -eEEEEecCCcCC-CccHHHHhhcCCC------------CCHH---HHHHHHHHhCCchhhhhCCCCCccccccCCCCCC
Q 037346 422 -TKAYVAQSPWIQ-SGKIEENILFGKE------------MDRE---RYERVLEACSLKKDLEVLPFGDQTIIGERGINLS 484 (1156)
Q Consensus 422 -~~~~v~Q~~~~~-~~ti~eni~~~~~------------~~~~---~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LS 484 (1156)
++||++|++.|. ..||.+|++.|+- ++++ ..-++++..++.+... .+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-----------qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-----------QRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-----------HHhccCC
Confidence 379999999875 5699999998742 2333 3334566666655432 3557899
Q ss_pred HHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEc
Q 037346 485 GGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQA 560 (1156)
Q Consensus 485 gGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~ 560 (1156)
|||+|||+|||||+++|+++|-|||+++|||.+.+++++.+.. ..|.|+|+.-|++++.. +||||+-|++|+|+++
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 9999999999999999999999999999999999999987643 57899999999999985 6999999999999999
Q ss_pred cChHHHH
Q 037346 561 GKYSDIL 567 (1156)
Q Consensus 561 g~~~~l~ 567 (1156)
|+.+++-
T Consensus 230 g~~~el~ 236 (258)
T COG3638 230 GPASELT 236 (258)
T ss_pred CChhhhh
Confidence 9998854
No 123
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.7e-40 Score=353.77 Aligned_cols=199 Identities=57% Similarity=0.943 Sum_probs=181.1
Q ss_pred EEEeeeEEEeCCCCC--CCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCeEEEEecCCcCCCc
Q 037346 358 IEIIDGSFSWDFSSP--NPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGTKAYVAQSPWIQSG 435 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~--~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~~~~v~Q~~~~~~~ 435 (1156)
++++|+++.|+...+ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++|++|+|.+++.
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~ 80 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNG 80 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccC
Confidence 468999999964211 369999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCH
Q 037346 436 KIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDD 515 (1156)
Q Consensus 436 ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~ 515 (1156)
|++||+.++...+.++..++.+.+++.+.+..+|.|+++.+++.+.+||||||||++||||++.+|+++||||||++||+
T Consensus 81 t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~ 160 (204)
T cd03250 81 TIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDA 160 (204)
T ss_pred cHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCH
Confidence 99999999876666677788888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEeCCe
Q 037346 516 HTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIKDGK 556 (1156)
Q Consensus 516 ~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~~G~ 556 (1156)
...+.+++.++. .+++|+|++||+++.+..||++++|++|+
T Consensus 161 ~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 161 HVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999888875432 34789999999999887799999999985
No 124
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-40 Score=340.69 Aligned_cols=202 Identities=26% Similarity=0.413 Sum_probs=173.8
Q ss_pred cEEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 357 AIEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
.++++|+++.|+... -.++++||||+|.+||+++|+|+||||||||.++|+|+.+|++|+|.++|+
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 589999999997421 114999999999999999999999999999999999999999999999993
Q ss_pred -EEEEecCCcC---CCccHHHHhhcCC-----CCCHHHHHHHHHHhCCchh-hhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 423 -KAYVAQSPWI---QSGKIEENILFGK-----EMDRERYERVLEACSLKKD-LEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 423 -~~~v~Q~~~~---~~~ti~eni~~~~-----~~~~~~~~~~~~~~~l~~~-~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
+-+|+|+|.- +..||++-|.-+. +..+++..++++..+|.+. +.+.| .+||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 5799999962 4458888776432 2234567889999999764 44444 689999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHh
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||||..+|++||||||||+||+.++.+|++.+.. ..+-|.|+||||+..+.+ ||||++|++|++++.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999887654 456799999999999976 99999999999999999999876
Q ss_pred c
Q 037346 569 S 569 (1156)
Q Consensus 569 ~ 569 (1156)
.
T Consensus 232 ~ 232 (252)
T COG1124 232 H 232 (252)
T ss_pred C
Confidence 5
No 125
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=354.48 Aligned_cols=200 Identities=35% Similarity=0.513 Sum_probs=178.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.++++|++|+|+.+ .++|+|+|++|++|+.++|+|+||||||||++++.|+++|++|.|.++|.
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 58899999999743 68999999999999999999999999999999999999999999999883
Q ss_pred EEEEecCC--cCCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 KAYVAQSP--WIQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 ~~~v~Q~~--~~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
+|||+|+| .+|..||.|.+.||.. .+ +++..++++.|++.+..+..| .+|||||||||||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHh
Confidence 79999999 5788999999999853 22 356778899999987765444 6899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHhc
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|.+|..+|+++|||||||+||+..++.+.+.+.. ..|+|+|++|||++.+.. ||++++|++|+++.+|+++++.+.
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999887644 336899999999999865 999999999999999999888754
No 126
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2e-40 Score=326.02 Aligned_cols=191 Identities=27% Similarity=0.404 Sum_probs=171.4
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC----------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG---------------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g---------------- 421 (1156)
|+|+||++.|+. +.++|+|+||+|++||++.|+||||||||||+++|.++..|+.|+|.++|
T Consensus 2 I~f~~V~k~Y~~--g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPG--GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCC--CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 789999999984 36799999999999999999999999999999999999999999999998
Q ss_pred eEEEEecCCcCC-CccHHHHhhcCCCC-------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 422 TKAYVAQSPWIQ-SGKIEENILFGKEM-------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 422 ~~~~v~Q~~~~~-~~ti~eni~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
+||+|+|+.-+. .-||.||++|.... -+++..++++.++|.+....+| .+||||||||++|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 379999998764 56999999996431 2466778999999999988888 5899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHH--hcCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEcc
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCW--VSSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAG 561 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~--~~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g 561 (1156)
|||+..+|++||-||||.+|||.....|++... ...|.||+++|||.+.+.. --+++.+++|+++...
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999999987653 3679999999999999875 6799999999998643
No 127
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.7e-39 Score=362.22 Aligned_cols=171 Identities=21% Similarity=0.297 Sum_probs=139.3
Q ss_pred CCeEEEEEEEEEEcCCCC---------------ceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhc
Q 037346 945 HGEVNIRHLQVRYAPNLP---------------LVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTR 1009 (1156)
Q Consensus 945 ~g~I~~~~Vsf~Y~~~~~---------------~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~ 1009 (1156)
...+++.+|+|.|.|+.+ ...+|++|+||||+++++.+-.+|..|.+-+.+ |.+
T Consensus 360 ~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 457899999999998874 235599999999999999999999999998876 788
Q ss_pred Ceeeccccccc-cccchhccC----CCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc--------ccccccCCCEEEEe
Q 037346 1010 LSIIPQDPTMF-EGTTRSNLD----PLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ--------GRVLLKKSKVLVLD 1076 (1156)
Q Consensus 1010 i~~VpQdp~LF-~gTIr~Nl~----~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~--------ARALLr~~~ILiLD 1076 (1156)
|++-.|..+=| +-.+-. +| .+.-.++||+++.|...|+...+...+-.-.|+ |-....+|.+||||
T Consensus 429 i~~f~Qhhvd~l~~~v~~-vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~PhlLVLD 507 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNA-VDFMEKSFPGKTEEEIRRHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNNPHLLVLD 507 (582)
T ss_pred ecchhHhhhhHHHHHhHH-HHHHHHhCCCCCHHHHHHHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCCCcEEEec
Confidence 99999977533 211111 11 112237999999999999998887666333333 56778899999999
Q ss_pred cCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEee
Q 037346 1077 EATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKE 1129 (1156)
Q Consensus 1077 EaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE 1129 (1156)
|||.+||.++-..+-++|+.. +.-||+|+|+.+.|.. |+.++|.++|+|.-
T Consensus 508 EPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 508 EPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred CCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 999999999999999999876 5679999999999986 99999999999986
No 128
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2e-39 Score=355.79 Aligned_cols=213 Identities=33% Similarity=0.488 Sum_probs=189.1
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------eEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------TKA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------~~~ 424 (1156)
++++|+++.|+...++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4689999999743335799999999999999999999999999999999999999999999988 279
Q ss_pred EEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCe
Q 037346 425 YVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADI 503 (1156)
Q Consensus 425 ~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~i 503 (1156)
|++|+|.+++.|++||+.++.. ...++..+.++.+++.+.+..+|.|.++.++....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999888899999998753 234555667777888888888998999989999999999999999999999999999
Q ss_pred eeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 504 FLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 504 lllDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
+||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+..||++++|++|++++.|+.+++....
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 228 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQK 228 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcC
Confidence 999999999999999988876643 3688999999999988889999999999999999988876543
No 129
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-39 Score=353.75 Aligned_cols=210 Identities=31% Similarity=0.471 Sum_probs=189.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------eE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------TK 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------~~ 423 (1156)
.++++|++++|+. .+++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 4889999999962 34699999999999999999999999999999999999999999999987 27
Q ss_pred EEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 424 AYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 424 ~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
+|++|+++++..|++||+.++.. ...++..+.++.+++.+.++.+|.|.++.++....+||||||||++|||||+.+|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999988999999998754 34566777788889988899999999999999999999999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHh
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 9999999999999999988876644 35899999999999887899999999999999998877654
No 130
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-39 Score=353.32 Aligned_cols=212 Identities=33% Similarity=0.515 Sum_probs=189.4
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~ 424 (1156)
++++|+++.|+. ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 468999999962 356999999999999999999999999999999999999999999999882 78
Q ss_pred EEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCe
Q 037346 425 YVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADI 503 (1156)
Q Consensus 425 ~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~i 503 (1156)
|++|+|++++.|++||+.++.. .......+.++.+++.+.+..+|.|.++.+++++.+||||||||++|||||+.+|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998753 344456677788888888899999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCc
Q 037346 504 FLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGT 571 (1156)
Q Consensus 504 lllDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 571 (1156)
+||||||++||+.+.+.+.+.+.. .+|+|+|++||+++.+..||++++|++|++++.|+.+++.....
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~ 227 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGG 227 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhccc
Confidence 999999999999999988876644 23889999999999987799999999999999999888776443
No 131
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-39 Score=353.36 Aligned_cols=213 Identities=33% Similarity=0.501 Sum_probs=189.8
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~ 424 (1156)
++++|+++.|+.. +.++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4689999999632 237999999999999999999999999999999999999999999999872 79
Q ss_pred EEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCe
Q 037346 425 YVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADI 503 (1156)
Q Consensus 425 ~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~i 503 (1156)
|++|++++++.|++||+.++.. .....+.+.++.+++.+.++.+|.|.++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998753 345566677778888888999998999999999999999999999999999999999
Q ss_pred eeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhcCc
Q 037346 504 FLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNSGT 571 (1156)
Q Consensus 504 lllDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 571 (1156)
+||||||++||+.+++.+.+.+.. .+++|+|++||+++.+..||++++|++|++++.|+++++.....
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 228 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGG 228 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCc
Confidence 999999999999999988876644 35889999999999987899999999999999999988875443
No 132
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.2e-39 Score=350.22 Aligned_cols=205 Identities=32% Similarity=0.420 Sum_probs=187.1
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|+++.|+.. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 47899999999732 357999999999999999999999999999999999999999999999872 6
Q ss_pred EEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCe
Q 037346 424 AYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADI 503 (1156)
Q Consensus 424 ~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~i 503 (1156)
+|++|+|.+++.|++||+.+......++..+.++.+++.+.+..+|.|+++..++.+.+||||||||++||||++.+|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987666666777888899999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccC
Q 037346 504 FLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGK 562 (1156)
Q Consensus 504 lllDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~ 562 (1156)
+||||||++||+.+++.+.+.+.. .+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999988877654 34689999999999988899999999999998775
No 133
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.1e-39 Score=355.94 Aligned_cols=214 Identities=28% Similarity=0.392 Sum_probs=192.9
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------ 422 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------ 422 (1156)
.+.++++|++++|+.. ...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 17 ~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 17 GGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 4579999999999632 257999999999999999999999999999999999999999999999872
Q ss_pred -EEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCC
Q 037346 423 -KAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDA 501 (1156)
Q Consensus 423 -~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~ 501 (1156)
++|++|+|+++++|++||+........+++..+++..++.+.++.+|.|+++.+++.+.+||||||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 6999999999999999999765444456677788888998889999999999999999999999999999999999999
Q ss_pred CeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 502 DIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 502 ~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
+++||||||++||+.+++.+++.+.. .++.|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 244 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQ 244 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhc
Confidence 99999999999999999888776544 357999999999999888999999999999999999988764
No 134
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.4e-39 Score=370.13 Aligned_cols=201 Identities=25% Similarity=0.358 Sum_probs=173.6
Q ss_pred EEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 358 IEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
|+++|++++|+..+ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 247999999999999999999999999999999999999999999999873
Q ss_pred --EEEEecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 423 --KAYVAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 423 --~~~v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
++|++|++.++. .|++||+.++.. .+ +++..++++..+|.+..+ ..+.+|||||||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~-----------~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHD-----------SYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 799999999885 699999998532 22 234566777777765443 345689999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||||+.+|++||||||||+||+.+...+.+.+.. ..|.|+|+|||+++.+. .||+|++|++|++++.|+++++..
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999998876644 24899999999999986 499999999999999999999875
Q ss_pred c
Q 037346 569 S 569 (1156)
Q Consensus 569 ~ 569 (1156)
.
T Consensus 231 ~ 231 (343)
T TIGR02314 231 H 231 (343)
T ss_pred C
Confidence 4
No 135
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-39 Score=370.02 Aligned_cols=201 Identities=26% Similarity=0.355 Sum_probs=175.2
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAY 425 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~ 425 (1156)
.++++|+++.|+. +.++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4889999999941 357999999999999999999999999999999999999999999999983 799
Q ss_pred EecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 426 VAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 426 v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
|+|++.+|. .||+|||.|+.. .+ .++.+++++.++|.+..+.. ..+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRK-----------PRELSGGQRQRVAMGRAI 149 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 999999885 599999998743 12 24566778888887655443 468999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
+.+|++||||||||+||+.+++.+.+.+.. ..|.|+|+|||+++.+. .||+|++|++|++++.|+++++.+..
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 999999999999999999999988876643 34899999999998765 69999999999999999999987653
No 136
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.2e-38 Score=345.52 Aligned_cols=204 Identities=37% Similarity=0.511 Sum_probs=182.7
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|+++.|+.. ++++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 47899999999632 257999999999999999999999999999999999999999999999883 6
Q ss_pred EEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 424 AYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 424 ~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
+|++|+++++..|++||+.++.. ...++..+.++.+++.+.++..|.|.+|.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999888899999988643 34556778888899998889999999999999999999999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEcc
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAG 561 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g 561 (1156)
++||||||++||+.++..+.+.+.. .+++|+|++||+++.+..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999998887654 2348999999999988779999999999998654
No 137
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-39 Score=367.05 Aligned_cols=201 Identities=25% Similarity=0.361 Sum_probs=174.4
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EE
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KA 424 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~ 424 (1156)
..|+++|+++.|+ +..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 5 ~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 81 (351)
T PRK11432 5 NFVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDIC 81 (351)
T ss_pred cEEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 3699999999996 356899999999999999999999999999999999999999999999983 69
Q ss_pred EEecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHh
Q 037346 425 YVAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARP 496 (1156)
Q Consensus 425 ~v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAra 496 (1156)
||+|++.+|. .||+|||.|+.. .+ .++.+++++..++....+ +...+|||||||||+||||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~-----------r~~~~LSgGq~QRVaLARa 150 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFED-----------RYVDQISGGQQQRVALARA 150 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHHHH
Confidence 9999999986 599999999743 12 245566777777765443 3457899999999999999
Q ss_pred hccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 497 LYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 497 l~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
|+.+|+++|||||||+||+.+++++.+.+.. ..|.|+|+|||+++.+ ..||+|++|++|++++.|+++++....
T Consensus 151 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p 228 (351)
T PRK11432 151 LILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQP 228 (351)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999998776543 3489999999999887 469999999999999999999987643
No 138
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-39 Score=351.32 Aligned_cols=198 Identities=30% Similarity=0.384 Sum_probs=168.8
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------- 422 (1156)
++++|+++.|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 46899999996 357999999999999999999999999999999999999999999999872
Q ss_pred -EEEEecCCcCCCc-cHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 423 -KAYVAQSPWIQSG-KIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 423 -~~~v~Q~~~~~~~-ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
++|++|++.++.. |++||+.++.. .+ .++..++++.+++.+... ....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAED-----------LYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHH
Confidence 6899999988775 99999987521 22 234455677777654332 344689999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||||+.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999998876644 2 4889999999999876 599999999999999999888764
Q ss_pred c
Q 037346 569 S 569 (1156)
Q Consensus 569 ~ 569 (1156)
.
T Consensus 227 ~ 227 (235)
T cd03261 227 S 227 (235)
T ss_pred C
Confidence 3
No 139
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=361.05 Aligned_cols=204 Identities=25% Similarity=0.373 Sum_probs=172.7
Q ss_pred ccEEEeeeEEEeCCCC--CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------
Q 037346 356 TAIEIIDGSFSWDFSS--PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------ 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------ 421 (1156)
..|+++|++|.|+... +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 4699999999997321 24699999999999999999999999999999999999999999999975
Q ss_pred -----------------eEEEEecCC--cCCCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccc
Q 037346 422 -----------------TKAYVAQSP--WIQSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTI 475 (1156)
Q Consensus 422 -----------------~~~~v~Q~~--~~~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~ 475 (1156)
.++||+|+| .+++.|++|||.|+.. .+. ++..+.++.+++.. ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~ 169 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD----------SY 169 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------hH
Confidence 158999998 6888899999998742 222 23444555555532 12
Q ss_pred cccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEE
Q 037346 476 IGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVI 552 (1156)
Q Consensus 476 v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l 552 (1156)
.++.+.+||||||||++|||||+.+|+++||||||++||+.+++.+.+.+.. .+|+|+|+|||+++.+. .||+|++|
T Consensus 170 ~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl 249 (320)
T PRK13631 170 LERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVM 249 (320)
T ss_pred hcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEE
Confidence 3566789999999999999999999999999999999999999998876643 45899999999999874 69999999
Q ss_pred eCCeEEEccChHHHHhc
Q 037346 553 KDGKITQAGKYSDILNS 569 (1156)
Q Consensus 553 ~~G~i~~~g~~~~l~~~ 569 (1156)
++|++++.|+++++...
T Consensus 250 ~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 250 DKGKILKTGTPYEIFTD 266 (320)
T ss_pred ECCEEEEeCCHHHHhcC
Confidence 99999999999988753
No 140
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.5e-38 Score=366.00 Aligned_cols=201 Identities=29% Similarity=0.389 Sum_probs=175.4
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EE
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KA 424 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~ 424 (1156)
..++++|+++.|+ +.++|+|+||++++||+++|+|||||||||||++|+|+++|++|+|.++|. ++
T Consensus 13 ~~L~l~~l~~~~~---~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 89 (375)
T PRK09452 13 PLVELRGISKSFD---GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVN 89 (375)
T ss_pred ceEEEEEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 4599999999996 356899999999999999999999999999999999999999999999984 79
Q ss_pred EEecCCcCCCc-cHHHHhhcCCCC---C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHh
Q 037346 425 YVAQSPWIQSG-KIEENILFGKEM---D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARP 496 (1156)
Q Consensus 425 ~v~Q~~~~~~~-ti~eni~~~~~~---~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAra 496 (1156)
||+|++.+|.. ||+|||.|+... . .++.+++++.+++.+.++..| .+|||||||||+||||
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLARa 158 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIARA 158 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999998855 999999987431 2 235566777778876555444 6899999999999999
Q ss_pred hccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 497 LYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 497 l~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
|+.+|+++|||||||+||+..++.+.+.+.. ..|.|+|+|||+.+.+. .||+|++|++|++++.|+++++....
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 9999999999999999999999988776643 34899999999998864 69999999999999999999987653
No 141
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.1e-38 Score=365.68 Aligned_cols=200 Identities=30% Similarity=0.370 Sum_probs=175.2
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAY 425 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~ 425 (1156)
.++++|++++|+ +..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|+ ++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 4 YLSIDNIRKRFG---AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 589999999996 356899999999999999999999999999999999999999999999983 799
Q ss_pred EecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 426 VAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 426 v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
|+|++.+|. .||+|||.|+.. .+ .++.+++++.++|.+..+ +.+.+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSER-----------KYPGQLSGGQQQRVALARAL 149 (353)
T ss_pred EeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhh-----------CChhhCCHHHHHHHHHHHHH
Confidence 999999886 699999998742 22 345667777777765544 44578999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
+.+|+++|||||||+||+.++.++.+.+.. ..|.|+|+|||+++.+. .||+|++|++|++++.|+++++.+..
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 999999999999999999999998776643 34889999999999865 69999999999999999999998653
No 142
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=362.20 Aligned_cols=199 Identities=32% Similarity=0.452 Sum_probs=172.8
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAY 425 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~ 425 (1156)
.++++|+++.|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+ ++|
T Consensus 2 ~L~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~ 78 (353)
T PRK10851 2 SIEIANIKKSFG---RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGF 78 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEE
Confidence 378999999996 356999999999999999999999999999999999999999999999883 799
Q ss_pred EecCCcCCC-ccHHHHhhcCCC-------CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 426 VAQSPWIQS-GKIEENILFGKE-------MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 426 v~Q~~~~~~-~ti~eni~~~~~-------~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
|+|++.+|. .|++||+.|+.. .+ +++..++++.++|.+..+ +...+|||||||||+|
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LSgGq~QRval 147 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLAD-----------RYPAQLSGGQKQRVAL 147 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHHH
Confidence 999999886 599999998742 12 235566777777765443 3456899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
||||+.+|+++||||||++||+.+++.+.+.+.. ..|.|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 148 ArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 148 ARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999988776543 33789999999999875 5999999999999999999998764
No 143
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-38 Score=354.81 Aligned_cols=203 Identities=27% Similarity=0.401 Sum_probs=171.9
Q ss_pred cEEEeeeEEEeCCCC--CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------
Q 037346 357 AIEIIDGSFSWDFSS--PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------- 421 (1156)
.++++|+++.|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 378999999996322 24799999999999999999999999999999999999999999999987
Q ss_pred --eEEEEecCC--cCCCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 422 --TKAYVAQSP--WIQSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 422 --~~~~v~Q~~--~~~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
+++|+||+| .+++.|++|||.|+.. .+. ++.+++++.++|.. .+...+.+.+||||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~qr 152 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKRR 152 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHHH
Confidence 268999998 5678899999998632 222 34566777777751 112345567999999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
++|||||+.+|+++||||||++||+.++.++.+.+.. . .|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~ 232 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREV 232 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999998876643 2 4899999999999875 6999999999999999999887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
.+
T Consensus 233 ~~ 234 (287)
T PRK13637 233 FK 234 (287)
T ss_pred Hh
Confidence 64
No 144
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2e-38 Score=363.83 Aligned_cols=201 Identities=28% Similarity=0.395 Sum_probs=175.0
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCC--cEEEEcCe-----------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKES--GIIRLCGT----------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~--G~i~~~g~----------- 422 (1156)
+.++++|++++|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 4 GGIRIDHLRVAYG---ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRG 80 (362)
T ss_pred eEEEEEEEEEEEC---CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCC
Confidence 3589999999996 3469999999999999999999999999999999999999999 99999883
Q ss_pred EEEEecCCcCCCc-cHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 423 KAYVAQSPWIQSG-KIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~-ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
++||+|++.+|.. ||+|||.|+.. .. .++.+++++.++|.+..+. ...+|||||||||+||
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~-----------~~~~LSgGq~QRvaLA 149 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAH-----------LPAQLSGGMQQRIAIA 149 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhC-----------ChhhCCHHHHHHHHHH
Confidence 7999999998865 99999998642 12 2456677888888665544 4468999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cC--CCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SS--SKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~--~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|||+.+|+++|||||||+||+..++++.+.+.. .+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 150 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 150 RAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999998876643 23 789999999999875 5999999999999999999999865
Q ss_pred C
Q 037346 570 G 570 (1156)
Q Consensus 570 ~ 570 (1156)
.
T Consensus 230 p 230 (362)
T TIGR03258 230 P 230 (362)
T ss_pred c
Confidence 3
No 145
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=354.94 Aligned_cols=201 Identities=25% Similarity=0.407 Sum_probs=171.9
Q ss_pred EEEeeeEEEeCCCC--CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 358 IEIIDGSFSWDFSS--PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~--~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
|+++|++|+|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997321 136999999999999999999999999999999999999999999999873
Q ss_pred ----EEEEecCC--cCCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 423 ----KAYVAQSP--WIQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 423 ----~~~v~Q~~--~~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
++||+|+| .++..|+.||+.|+.. .. ++++.++++.++|.+++ ..+...+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHHH
Confidence 58999998 6788899999998742 22 23466677777774322 12455789999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
|++|||||+.+|+++||||||++||+.++..+.+.+.. .+|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999988876543 35899999999999885 5999999999999999999988
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
..
T Consensus 232 ~~ 233 (288)
T PRK13643 232 FQ 233 (288)
T ss_pred Hc
Confidence 65
No 146
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=353.89 Aligned_cols=202 Identities=29% Similarity=0.415 Sum_probs=173.6
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|++++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 489999999996422346999999999999999999999999999999999999999999999883 6
Q ss_pred EEEecCCc--CCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 424 AYVAQSPW--IQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 424 ~~v~Q~~~--~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+|++|+|. ++..||+|||.|+.. .+ .++..++++.++|.+..+. ...+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKER-----------EPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 89999984 566799999998732 22 2456677888888655443 3468999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|||+.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+..||+|++|++|+++..|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999988876643 2 48999999999998877999999999999999999887653
No 147
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.3e-38 Score=363.87 Aligned_cols=187 Identities=26% Similarity=0.365 Sum_probs=163.1
Q ss_pred CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----------------eEEEEecCCcCCC
Q 037346 372 PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-----------------TKAYVAQSPWIQS 434 (1156)
Q Consensus 372 ~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-----------------~~~~v~Q~~~~~~ 434 (1156)
++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++||+|++++|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 45799999999999999999999999999999999999999999999988 3799999999987
Q ss_pred -ccHHHHhhcCCCC---C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeee
Q 037346 435 -GKIEENILFGKEM---D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLL 506 (1156)
Q Consensus 435 -~ti~eni~~~~~~---~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illl 506 (1156)
.||+|||.|+... + .++..++++.++|.... ++.+.+|||||||||+|||||+.+|+++||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~-----------~~~p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYE-----------HRYPDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhh-----------hCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 5999999986432 2 23445566666765444 345578999999999999999999999999
Q ss_pred eCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 507 DDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 507 Dep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|||||+||+.+++++.+.+.. ..++|+|+|||+++.+ +.||+|++|++|++++.|++++++..
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999999887654 3489999999999986 56999999999999999999998764
No 148
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-38 Score=354.24 Aligned_cols=202 Identities=25% Similarity=0.420 Sum_probs=172.4
Q ss_pred EEEeeeEEEeCCCC--CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 358 IEIIDGSFSWDFSS--PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~--~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
++++|++|+|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996322 246999999999999999999999999999999999999999999999883
Q ss_pred ----EEEEecCC--cCCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 423 ----KAYVAQSP--WIQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 423 ----~~~v~Q~~--~~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
++||+|+| .+++.||+|||.|+.. .+ .++.+++++.++|...+. ...+.+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHHHH
Confidence 68999998 5777899999998632 22 235567777888753321 2445789999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|++|||||+.+|+++||||||++||+.++..+.+.+.. ..|.|||++||+++.+. .||+|++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999988876643 24899999999999875 599999999999999999988
Q ss_pred HHhc
Q 037346 566 ILNS 569 (1156)
Q Consensus 566 l~~~ 569 (1156)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 7653
No 149
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-38 Score=345.03 Aligned_cols=198 Identities=28% Similarity=0.422 Sum_probs=168.9
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----------eEEE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-----------TKAY 425 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-----------~~~~ 425 (1156)
.++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 2 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~ 78 (239)
T cd03296 2 SIEVRNVSKRFG---DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGF 78 (239)
T ss_pred EEEEEeEEEEEC---CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEE
Confidence 378999999996 35799999999999999999999999999999999999999999999987 2799
Q ss_pred EecCCcCCC-ccHHHHhhcCCCC-------C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 426 VAQSPWIQS-GKIEENILFGKEM-------D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 426 v~Q~~~~~~-~ti~eni~~~~~~-------~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|+|.++. .|++||+.++... + .++..++++.+++.+.. .....+||||||||++|
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~l 147 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLA-----------DRYPAQLSGGQRQRVAL 147 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHHH
Confidence 999998875 5999999876321 1 12345566666665433 34457899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
||||+.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 148 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 9999999999999999999999999988876643 2 3789999999999875 599999999999999999888764
No 150
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-38 Score=340.39 Aligned_cols=190 Identities=33% Similarity=0.417 Sum_probs=162.5
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAYV 426 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~v 426 (1156)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYG---SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeC---CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 46899999996 357999999999999999999999999999999999999999999999873 7999
Q ss_pred ecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 427 AQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 427 ~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
||+|.++. .|++||+.++.. .+ .++.+++++.+++.+... +...+||||||||++|||||+
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~al~ 146 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLN-----------RYPHELSGGQQQRVALARALA 146 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHHHHHHHh
Confidence 99998775 699999987532 12 234556677777765443 344689999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||+|++|++|++++.|
T Consensus 147 ~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 147 REPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998886644 2 4899999999999875 59999999999998765
No 151
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-38 Score=363.66 Aligned_cols=199 Identities=29% Similarity=0.386 Sum_probs=172.9
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAY 425 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~ 425 (1156)
.++++|++++|+ +..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+ ++|
T Consensus 3 ~l~i~~l~~~~~---~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYG---DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 488999999996 356999999999999999999999999999999999999999999999883 799
Q ss_pred EecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 426 VAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 426 v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
++|++.+|. .|++||+.|+.. .+ .++.+++++.+++.+..+ ....+|||||||||+|||||
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~-----------~~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLD-----------RKPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhc-----------CChhhCCHHHHHHHHHHHHH
Confidence 999998886 599999998642 22 245667777777765443 34468999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
+.+|+++||||||++||+.+++.+.+.+.. ..|.|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999988776543 24889999999998875 5999999999999999999998754
No 152
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4e-38 Score=345.23 Aligned_cols=197 Identities=24% Similarity=0.382 Sum_probs=167.1
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------E
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------K 423 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------~ 423 (1156)
++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 46899999996 346999999999999999999999999999999999999999999999872 6
Q ss_pred EEEecCCcCCCc-cHHHHhhcCCCC-------------C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCH
Q 037346 424 AYVAQSPWIQSG-KIEENILFGKEM-------------D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSG 485 (1156)
Q Consensus 424 ~~v~Q~~~~~~~-ti~eni~~~~~~-------------~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSg 485 (1156)
+|++|++.++.. |++||+.++... + .++..++++.+++.. ..+....+|||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSg 146 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLAD-----------LADRPAGELSY 146 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccc-----------hhhCChhhCCH
Confidence 899999988775 999999875321 0 123444555555533 23456678999
Q ss_pred HHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccC
Q 037346 486 GQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGK 562 (1156)
Q Consensus 486 GqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~ 562 (1156)
|||||++||||++.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 147 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (236)
T cd03219 147 GQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGT 226 (236)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecC
Confidence 999999999999999999999999999999999998886644 368999999999999864 99999999999999999
Q ss_pred hHHHHh
Q 037346 563 YSDILN 568 (1156)
Q Consensus 563 ~~~l~~ 568 (1156)
++++..
T Consensus 227 ~~~~~~ 232 (236)
T cd03219 227 PDEVRN 232 (236)
T ss_pred HHHhcc
Confidence 887753
No 153
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.2e-38 Score=343.71 Aligned_cols=196 Identities=27% Similarity=0.395 Sum_probs=166.1
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCC-----CCCCcEEEEcCe----------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGV-----PKESGIIRLCGT---------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~-----~~~~G~i~~~g~---------- 422 (1156)
|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.
T Consensus 1 i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYG---DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 46899999996 347999999999999999999999999999999999999 999999999872
Q ss_pred -----EEEEecCCcCCCccHHHHhhcCCC---C-C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 423 -----KAYVAQSPWIQSGKIEENILFGKE---M-D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 423 -----~~~v~Q~~~~~~~ti~eni~~~~~---~-~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
++|++|++.++..|++||+.++.. . . +++..++++.+++.+.+...++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 689999998887899999987532 1 1 2345667777777654432210 4689999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhc-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVS-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|++||||++.+|+++||||||++||+.+++.+.+.+... +.+|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 999999999999999999999999999999998876542 2389999999999876 599999999999999887654
No 154
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-38 Score=351.19 Aligned_cols=197 Identities=30% Similarity=0.435 Sum_probs=170.8
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|+++.|+. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 5899999999962 346999999999999999999999999999999999999999999999882 6
Q ss_pred EEEecCC--cCCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 424 AYVAQSP--WIQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 424 ~~v~Q~~--~~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+|++|+| .++..|++||+.|+.. .+ ++++.++++.+++.+..... ..+||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKP-----------PYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCC-----------hhhCCHHHHHHHHHH
Confidence 9999998 5678899999998632 22 24566778888886555433 358999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
|||+.+|+++||||||++||+.++.++.+.+.. .+|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999998876643 34899999999999985 6999999999999999998654
No 155
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-36 Score=371.25 Aligned_cols=190 Identities=23% Similarity=0.291 Sum_probs=155.5
Q ss_pred CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC---CcEEEEcCe----------EEEEecCCcCC-CccH
Q 037346 372 PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE---SGIIRLCGT----------KAYVAQSPWIQ-SGKI 437 (1156)
Q Consensus 372 ~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~---~G~i~~~g~----------~~~v~Q~~~~~-~~ti 437 (1156)
...+|+|++.-+++|+.+.+.||.|||||||++++.|..+-. .|+|..||. ++|++|+...+ ..||
T Consensus 127 ~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTV 206 (1391)
T KOG0065|consen 127 KIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTV 206 (1391)
T ss_pred cceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEE
Confidence 346899999999999999999999999999999999998643 568999883 69999988755 5699
Q ss_pred HHHhhcCC-------CCC---HHHHH-----HHHHHhCCchhhhhCCCCCccccccCC-CCCCHHHHHHHHHHHhhccCC
Q 037346 438 EENILFGK-------EMD---RERYE-----RVLEACSLKKDLEVLPFGDQTIIGERG-INLSGGQKQRIQIARPLYQDA 501 (1156)
Q Consensus 438 ~eni~~~~-------~~~---~~~~~-----~~~~~~~l~~~~~~~~~g~~t~v~~~g-~~LSgGqkqRi~lAral~~~~ 501 (1156)
||-+-|.. .++ +..+. .+++..||+ ...||.||... ...|||||.||++|-++..++
T Consensus 207 reTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~-------~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~ 279 (1391)
T KOG0065|consen 207 RETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLD-------HCADTLVGNDMVRGVSGGERKRVSIGEMLVGPA 279 (1391)
T ss_pred eehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCch-------hhccceecccccccccCcccceeeeeeeeecCc
Confidence 99998842 122 22222 344555554 46678888775 469999999999999999999
Q ss_pred CeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCc--cccCCEEEEEeCCeEEEccChHHHHh
Q 037346 502 DIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEF--LPAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 502 ~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~--~~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
.++.+||+|.|||..++-++.+.+.+ .-+.|.++.-|+... ....|.|++|.+|+++++|+.++.+.
T Consensus 280 ~~~~~De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~ 351 (1391)
T KOG0065|consen 280 SILFWDEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLP 351 (1391)
T ss_pred ceeeeecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHH
Confidence 99999999999999999888776543 457788888888754 56799999999999999999988763
No 156
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.7e-38 Score=354.69 Aligned_cols=200 Identities=25% Similarity=0.405 Sum_probs=171.4
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------eE
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------TK 423 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------~~ 423 (1156)
..++++|++++|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| ++
T Consensus 6 ~~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 4699999999996 35799999999999999999999999999999999999999999999987 37
Q ss_pred EEEecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHH
Q 037346 424 AYVAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIAR 495 (1156)
Q Consensus 424 ~~v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAr 495 (1156)
||+||++.++. .|++||+.|... .+ .++.+++++.+++.+..+ ....+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKAD-----------AKVGELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhc-----------CchhhCCHHHHHHHHHHH
Confidence 99999998875 699999985221 12 234456667776654332 334689999999999999
Q ss_pred hhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHhc
Q 037346 496 PLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 496 al~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
||+++|++++|||||++||+.+++.+.+.+.. .+|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999998886644 358999999999999864 999999999999999999988643
No 157
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-38 Score=353.84 Aligned_cols=203 Identities=24% Similarity=0.373 Sum_probs=171.3
Q ss_pred cEEEeeeEEEeCCCC--CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------
Q 037346 357 AIEIIDGSFSWDFSS--PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------- 421 (1156)
.|+++|++++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 378999999996421 13699999999999999999999999999999999999999999999864
Q ss_pred ------------------------eEEEEecCC--cCCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhC
Q 037346 422 ------------------------TKAYVAQSP--WIQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVL 468 (1156)
Q Consensus 422 ------------------------~~~~v~Q~~--~~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~ 468 (1156)
.++||+|+| .++..||+|||.|+.. .+ .++..++++.++|..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~--- 158 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY--- 158 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh---
Confidence 258999987 4677899999998742 22 24456677777775321
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-c
Q 037346 469 PFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-A 545 (1156)
Q Consensus 469 ~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~ 545 (1156)
.++...+||||||||++|||||+.+|+++||||||++||+.....+.+.+.. ..|+|+|+|||+++.+. .
T Consensus 159 -------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 159 -------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 1345578999999999999999999999999999999999999988876643 45899999999999875 6
Q ss_pred CCEEEEEeCCeEEEccChHHHHhc
Q 037346 546 ADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 546 ~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
||+|++|++|++++.|+++++...
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999987653
No 158
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5e-38 Score=336.49 Aligned_cols=187 Identities=31% Similarity=0.470 Sum_probs=161.4
Q ss_pred EEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC----------eEEEEec
Q 037346 359 EIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG----------TKAYVAQ 428 (1156)
Q Consensus 359 ~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g----------~~~~v~Q 428 (1156)
+++|++++|+. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|
T Consensus 1 ~~~~l~~~~~~--~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q 78 (205)
T cd03226 1 RIENISFSYKK--GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQ 78 (205)
T ss_pred CcccEEEEeCC--cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEec
Confidence 36799999962 15799999999999999999999999999999999999999999999988 3799999
Q ss_pred CC--cCCCccHHHHhhcCCC---CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCe
Q 037346 429 SP--WIQSGKIEENILFGKE---MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADI 503 (1156)
Q Consensus 429 ~~--~~~~~ti~eni~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~i 503 (1156)
+| .++..|++||+.++.. .+.++..++++.+++.+..+. ...+||||||||++||||++.+|++
T Consensus 79 ~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 79 DVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKER-----------HPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCC-----------CchhCCHHHHHHHHHHHHHHhCCCE
Confidence 98 4567899999988642 233567788888888655443 3358999999999999999999999
Q ss_pred eeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEE
Q 037346 504 FLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKIT 558 (1156)
Q Consensus 504 lllDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~ 558 (1156)
+||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+. .||++++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999999988776643 35889999999999886 59999999999874
No 159
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-38 Score=351.98 Aligned_cols=202 Identities=23% Similarity=0.420 Sum_probs=170.5
Q ss_pred cEEEeeeEEEeCCCC--CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------
Q 037346 357 AIEIIDGSFSWDFSS--PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------- 421 (1156)
.++++|++|+|+... +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996322 24699999999999999999999999999999999999999999999987
Q ss_pred ----eEEEEecCC--cCCCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 ----TKAYVAQSP--WIQSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 ----~~~~v~Q~~--~~~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++||+|+| .++..|+.|||.|+.. .+. ++..++++.++|..+. ....+.+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~ 151 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDV----------MSQSPFQMSGGQM 151 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----------hhCCcccCCHHHH
Confidence 258999998 5777899999998632 222 3345566666664221 1345678999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYS 564 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 564 (1156)
||++|||||+.+|+++||||||++||+.++.++.+.+.. ..|+|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~ 231 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPK 231 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999998876643 24899999999999875 69999999999999999998
Q ss_pred HHHh
Q 037346 565 DILN 568 (1156)
Q Consensus 565 ~l~~ 568 (1156)
++.+
T Consensus 232 ~~~~ 235 (286)
T PRK13646 232 ELFK 235 (286)
T ss_pred HHHh
Confidence 8765
No 160
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-38 Score=340.27 Aligned_cols=195 Identities=32% Similarity=0.427 Sum_probs=165.2
Q ss_pred EEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------eEEEEec
Q 037346 358 IEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------TKAYVAQ 428 (1156)
Q Consensus 358 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------~~~~v~Q 428 (1156)
++++|+++.|+... .+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 46899999996311 15799999999999999999999999999999999999999999999988 3799999
Q ss_pred CCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 429 SPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 429 ~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
+|.++. .|++||+.++.. .. .++.++.++.+++.+.+. ....+||||||||++||||++.+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~al~~~ 149 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFEN-----------AYPHQLSGGMRQRVALARALAVD 149 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHHHHHHcC
Confidence 998876 699999987532 11 234566777777765443 33468999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEe--CCeEEEccCh
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIK--DGKITQAGKY 563 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~--~G~i~~~g~~ 563 (1156)
|+++||||||++||+.+++.+++.+.. ..++|+|++||+++.+. .||++++|+ +|++++.++.
T Consensus 150 p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 150 PDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999887643 24789999999999875 599999999 7999987764
No 161
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.9e-38 Score=340.32 Aligned_cols=188 Identities=27% Similarity=0.417 Sum_probs=160.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------- 422 (1156)
++++|++++|+.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 246999999999999999999999999999999999999999999999873
Q ss_pred -EEEEecCCcCCC-ccHHHHhhcCCC---C----CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 -KAYVAQSPWIQS-GKIEENILFGKE---M----DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 -~~~v~Q~~~~~~-~ti~eni~~~~~---~----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|+|.++. .|++||+.++.. . .+++..++++.+++.+..+. ...+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHA-----------LPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHHH
Confidence 689999998876 599999987521 1 13456677777777654433 346899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeE
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKI 557 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i 557 (1156)
||||+.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999998876644 34789999999999986 5999999999974
No 162
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-38 Score=359.87 Aligned_cols=201 Identities=26% Similarity=0.369 Sum_probs=171.9
Q ss_pred EEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------------
Q 037346 358 IEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------- 421 (1156)
|+++|++++|+... ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996311 35799999999999999999999999999999999999999999999987
Q ss_pred -eEEEEecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 422 -TKAYVAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 422 -~~~~v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
+++|++|++.++. .|++||+.++.. .+ .++..+.++.+++.+..+ ....+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKAD-----------RYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 2799999998876 699999987532 22 234556677777654433 345689999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHh
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||||+.+|+++||||||++||+.+++.+.+.+.. ..|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999998876644 248899999999998864 99999999999999999999875
Q ss_pred c
Q 037346 569 S 569 (1156)
Q Consensus 569 ~ 569 (1156)
.
T Consensus 231 ~ 231 (343)
T PRK11153 231 H 231 (343)
T ss_pred C
Confidence 4
No 163
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-38 Score=360.82 Aligned_cols=201 Identities=26% Similarity=0.377 Sum_probs=173.9
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EE
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KA 424 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~ 424 (1156)
..++++|++++|+ +.++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|. ++
T Consensus 18 ~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig 94 (377)
T PRK11607 18 PLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPIN 94 (377)
T ss_pred ceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 4699999999996 346999999999999999999999999999999999999999999999984 69
Q ss_pred EEecCCcCCCc-cHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHh
Q 037346 425 YVAQSPWIQSG-KIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARP 496 (1156)
Q Consensus 425 ~v~Q~~~~~~~-ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAra 496 (1156)
||+|++.+|.. ||.|||.|+.. .+ .++..++++.+++.+..+ ....+|||||||||+||||
T Consensus 95 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRVaLARA 163 (377)
T PRK11607 95 MMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAK-----------RKPHQLSGGQRQRVALARS 163 (377)
T ss_pred EEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHHHH
Confidence 99999998865 99999998742 22 234566777777765443 3446899999999999999
Q ss_pred hccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 497 LYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 497 l~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
|+.+|++||||||||+||+..++.+.+.+.. ..|.|+|+|||+++.+. .||+|++|++|++++.|+++++....
T Consensus 164 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 164 LAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999888765432 35899999999999864 69999999999999999999988653
No 164
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.3e-37 Score=336.56 Aligned_cols=196 Identities=46% Similarity=0.829 Sum_probs=176.0
Q ss_pred EEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----------------
Q 037346 359 EIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG----------------- 421 (1156)
Q Consensus 359 ~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g----------------- 421 (1156)
.+.|++|.|+. +.++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~--~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGS--GLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 57799999973 35799999999999999999999999999999999999999999999976
Q ss_pred eEEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCC
Q 037346 422 TKAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDA 501 (1156)
Q Consensus 422 ~~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~ 501 (1156)
.++|++|+|.+++.|++||+.++...+.++.+++++.+++.+.+..+|.|+++.++....+||||||||++||||++.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 26899999999988999999987666666677888999998888888999999999999999999999999999999999
Q ss_pred CeeeeeCCCCCcCHHHHHHHHHH-HH---hcCCCEEEEEccCCCccccCCEEEEEeCCe
Q 037346 502 DIFLLDDPFSPVDDHTGAHLFKF-CW---VSSSKTVIYATHQVEFLPAADLILVIKDGK 556 (1156)
Q Consensus 502 ~illlDep~s~lD~~~~~~i~~~-~~---~~~~~tvi~vtH~~~~~~~~d~i~~l~~G~ 556 (1156)
+++||||||++||+.+.+.+.+. ++ ...+.|+|++||+++.+..||++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999888762 22 235789999999999888899999999874
No 165
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.3e-37 Score=338.72 Aligned_cols=203 Identities=26% Similarity=0.430 Sum_probs=175.8
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------ 422 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------ 422 (1156)
.+.++++|++++|+...+.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 45799999999997432347999999999999999999999999999999999999999999999872
Q ss_pred -EEEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 423 -KAYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 423 -~~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
++|++|++.++..|++||+.++.. .....+.+..+...+...++.++.|.++.+++++.+||||||||++||||++++
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 799999999988999999988653 222233344445566777888888888888999999999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeE
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKI 557 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i 557 (1156)
|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999988876644 346899999999999877999999999874
No 166
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-38 Score=339.99 Aligned_cols=195 Identities=23% Similarity=0.361 Sum_probs=166.5
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------eEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------TKAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------~~~~ 425 (1156)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYG---DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEEC---CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 47899999996 35799999999999999999999999999999999999999999999987 3789
Q ss_pred EecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 426 VAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 426 v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
++|++.++. .|++||+.++.. .+ +++.+++++.+++.+..+ ....+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAAD-----------RLVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhCCHHHHHHHHHHHHH
Confidence 999998776 499999987421 11 235567777777765443 33468999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
+.+|+++||||||++||+.+.+.+.+.+.. . .|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999988876643 3 3789999999999886 5999999999999998887653
No 167
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=340.44 Aligned_cols=200 Identities=28% Similarity=0.393 Sum_probs=172.6
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSF---GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 488999999996 357999999999999999999999999999999999999999999999873 6
Q ss_pred EEEecCCcCCCccHHHHhhcCCCC---CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 424 AYVAQSPWIQSGKIEENILFGKEM---DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 424 ~~v~Q~~~~~~~ti~eni~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
+|++|+|.++..|++||+.++... ..++..++++.+++..+. ..+...+||||||||++||||++.+
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHHhcC
Confidence 899999999888999999876422 234566777777775322 1245678999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 999999999999999999988776543 2 4899999999999876 5999999999999999999888653
No 168
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=9.8e-38 Score=338.33 Aligned_cols=197 Identities=23% Similarity=0.412 Sum_probs=167.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------EEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------KAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------~~~ 425 (1156)
++++|+++.|+.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 4689999999631 257999999999999999999999999999999999999999999999873 689
Q ss_pred EecCCcCC-CccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 426 VAQSPWIQ-SGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 426 v~Q~~~~~-~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
++|++.++ ..|++||+.+... .. .++++++++.+++.+..+ ....+||||||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKAN-----------KRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHh-----------ChhhhCCHHHHHHHHHHHHH
Confidence 99999887 5799999987421 11 234566777777754332 33468999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
+.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999999998876644 34689999999999986 5999999999999999987764
No 169
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.5e-37 Score=342.27 Aligned_cols=196 Identities=35% Similarity=0.456 Sum_probs=167.2
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------- 422 (1156)
++++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 679999999961 357999999999999999999999999999999999999999999999872
Q ss_pred -EEEEecCCcCCC-ccHHHHhhcCCC---------------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCH
Q 037346 423 -KAYVAQSPWIQS-GKIEENILFGKE---------------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSG 485 (1156)
Q Consensus 423 -~~~v~Q~~~~~~-~ti~eni~~~~~---------------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSg 485 (1156)
++|++|++.++. .|++||+.++.. ...++..++++.+++...+ ...+.+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKA-----------YQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCH
Confidence 689999998775 699999987531 1123445566666665433 345678999
Q ss_pred HHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 486 GQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 486 GqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
|||||++|||||+.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999999988776643 2 3789999999999985 59999999999999999
Q ss_pred ChHHH
Q 037346 562 KYSDI 566 (1156)
Q Consensus 562 ~~~~l 566 (1156)
+++++
T Consensus 229 ~~~~~ 233 (243)
T TIGR02315 229 APSEL 233 (243)
T ss_pred CHHHh
Confidence 98876
No 170
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=344.32 Aligned_cols=204 Identities=28% Similarity=0.405 Sum_probs=172.0
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g--------- 421 (1156)
..++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYG---DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEEC---CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 3599999999996 3469999999999999999999999999999999999874 5899999977
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCC---C-C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKE---M-D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~---~-~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
.++|++|++.+++.|++||+.++.. . . .++.++.++.+++.+.+. +..++.+.+|||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 154 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQ 154 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHH
Confidence 2689999999888899999987521 1 1 234556677777654322 12345678999999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||++||||++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 234 (253)
T PRK14242 155 QQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQ 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999988876644 34789999999999885 599999999999999999988
Q ss_pred HHhc
Q 037346 566 ILNS 569 (1156)
Q Consensus 566 l~~~ 569 (1156)
+.+.
T Consensus 235 ~~~~ 238 (253)
T PRK14242 235 IFTR 238 (253)
T ss_pred HHcC
Confidence 7643
No 171
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-37 Score=342.61 Aligned_cols=197 Identities=31% Similarity=0.431 Sum_probs=166.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------- 422 (1156)
++++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468999999962 257999999999999999999999999999999999999999999999872
Q ss_pred -EEEEecCCcCCC-ccHHHHhhcCCC---------------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCH
Q 037346 423 -KAYVAQSPWIQS-GKIEENILFGKE---------------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSG 485 (1156)
Q Consensus 423 -~~~v~Q~~~~~~-~ti~eni~~~~~---------------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSg 485 (1156)
++|+||++.++. .|++||+.++.. ...++..++++.+++.+. ....+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDK-----------AYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhh-----------hCCCcccCCH
Confidence 689999998776 699999986521 112234455666665432 2345679999
Q ss_pred HHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 486 GQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 486 GqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
|||||++||||++.+|+++||||||++||+.+++.+.+.+.. ..|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 999999999999999999999999999999999998876644 24899999999999987 69999999999999999
Q ss_pred ChHHHH
Q 037346 562 KYSDIL 567 (1156)
Q Consensus 562 ~~~~l~ 567 (1156)
+++++.
T Consensus 228 ~~~~~~ 233 (241)
T cd03256 228 PPAELT 233 (241)
T ss_pred CHHHhh
Confidence 988763
No 172
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.3e-37 Score=334.16 Aligned_cols=190 Identities=26% Similarity=0.382 Sum_probs=165.2
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAYV 426 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~v 426 (1156)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGAL 77 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEe
Confidence 46899999995 357999999999999999999999999999999999999999999999873 7899
Q ss_pred ecCCcCC-CccHHHHhhcCC---CCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 427 AQSPWIQ-SGKIEENILFGK---EMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 427 ~Q~~~~~-~~ti~eni~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
+|++.++ +.|++||+.++. ..++++.+++++..++.+... +.+.+||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~~p~ 146 (208)
T cd03268 78 IEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-----------KKVKGFSLGMKQRLGIALALLGNPD 146 (208)
T ss_pred cCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-----------hhHhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999876 569999998753 234566777888888765443 3456899999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 147 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 147 LLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999988876643 35899999999999886 59999999999998765
No 173
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=8.4e-38 Score=338.37 Aligned_cols=189 Identities=33% Similarity=0.446 Sum_probs=160.3
Q ss_pred EEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------------
Q 037346 358 IEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------- 421 (1156)
++++|++++|+... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999996311 15799999999999999999999999999999999999999999999876
Q ss_pred --eEEEEecCCcCCCc-cHHHHhhcCCCC---C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 422 --TKAYVAQSPWIQSG-KIEENILFGKEM---D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 422 --~~~~v~Q~~~~~~~-ti~eni~~~~~~---~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
.++|++|+|.++.. |++||+.++... + ++++.++++.+++.+.++ ..+.+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLN-----------HYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhh-----------cChhhcCHHHHHHH
Confidence 27999999988865 999999885321 1 234566777777754433 44568999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccccCCEEEEEeCCeE
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLPAADLILVIKDGKI 557 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~~~d~i~~l~~G~i 557 (1156)
+|||||+.+|+++||||||++||+.+++.+.+.+.. . .++|+|++||+++.+..||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999988876644 2 47899999999998878999999999974
No 174
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=342.55 Aligned_cols=202 Identities=24% Similarity=0.358 Sum_probs=172.9
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC---CCCcEEEEcCe-----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP---KESGIIRLCGT----------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~---~~~G~i~~~g~----------- 422 (1156)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.
T Consensus 2 ~~~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYG---KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEEC---CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 478999999996 3579999999999999999999999999999999999984 68999999883
Q ss_pred --EEEEecCCcCCCccHHHHhhcCCC---C------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 423 --KAYVAQSPWIQSGKIEENILFGKE---M------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 423 --~~~v~Q~~~~~~~ti~eni~~~~~---~------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
++|+||+|.+++.|++||+.++.. . .+++..++++.+++.+.+.. ...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 699999999998999999987521 1 12345667788887654432 23456789999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
+||||++++|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999988776644 35889999999999876 599999999999999999988764
No 175
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=339.54 Aligned_cols=195 Identities=23% Similarity=0.338 Sum_probs=165.6
Q ss_pred cEEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------
Q 037346 357 AIEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------- 421 (1156)
.++++|+++.|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 589999999996322 14799999999999999999999999999999999999999999999987
Q ss_pred ---eEEEEecCCcCCCc-cHHHHhhcCC---CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 422 ---TKAYVAQSPWIQSG-KIEENILFGK---EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 422 ---~~~~v~Q~~~~~~~-ti~eni~~~~---~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
.++|++|+|.++.. |++||+.++. ..+ +++..++++.+++.+.. .+...+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRA-----------NHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 27899999988764 9999998742 112 23456677777765433 34457899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccC
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGK 562 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~ 562 (1156)
++||||++.+|+++||||||++||+.+.+.+.+.+.. .+|+|+|++||+++.+..+|++++|++|++++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 9999999999999999999999999999988876643 24899999999999988888999999999998765
No 176
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-37 Score=341.11 Aligned_cols=195 Identities=28% Similarity=0.346 Sum_probs=168.5
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------eEEEEe
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------TKAYVA 427 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------~~~~v~ 427 (1156)
..|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++
T Consensus 11 ~~l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~ 87 (257)
T PRK11247 11 TPLLLNAVSKRYG---ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMF 87 (257)
T ss_pred CcEEEEEEEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEe
Confidence 3599999999996 35799999999999999999999999999999999999999999999987 379999
Q ss_pred cCCcCCC-ccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeee
Q 037346 428 QSPWIQS-GKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFL 505 (1156)
Q Consensus 428 Q~~~~~~-~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ill 505 (1156)
|++.++. .|++||+.++.. ..+++..++++.+++.+.. ...+.+||||||||++|||||+.+|+++|
T Consensus 88 q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred cCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9998876 699999988642 1245566777777776543 34457899999999999999999999999
Q ss_pred eeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChH
Q 037346 506 LDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYS 564 (1156)
Q Consensus 506 lDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 564 (1156)
|||||++||+.++..+.+.+.. ..++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 157 LDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 157 LDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999988776643 24789999999999875 59999999999999887653
No 177
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-37 Score=360.26 Aligned_cols=199 Identities=26% Similarity=0.448 Sum_probs=173.8
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 589999999996 457999999999999999999999999999999999999999999999982 6
Q ss_pred EEEecCCcC-CCccHHHHhhcCCC-----C------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 424 AYVAQSPWI-QSGKIEENILFGKE-----M------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 424 ~~v~Q~~~~-~~~ti~eni~~~~~-----~------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
+|++|++.+ ++.|++||+.+++. + +.++.+++++..++.+..+ ....+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~-----------~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFAD-----------RPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHH
Confidence 999999986 57799999988742 1 2345667777777765443 34578999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
+|||||+++|+++||||||++||+.++..+.+.+.. .+|+|+|++||+++.+. .||++++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 999999999999999999999999999988876543 35889999999999985 599999999999999999999875
Q ss_pred c
Q 037346 569 S 569 (1156)
Q Consensus 569 ~ 569 (1156)
.
T Consensus 229 ~ 229 (402)
T PRK09536 229 A 229 (402)
T ss_pred c
Confidence 3
No 178
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.9e-37 Score=341.97 Aligned_cols=201 Identities=27% Similarity=0.377 Sum_probs=170.4
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC-----CcEEEEcCe----------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE-----SGIIRLCGT---------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~-----~G~i~~~g~---------- 422 (1156)
++++|++++|+ +.++++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYG---EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEEC---CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 78999999996 346999999999999999999999999999999999999998 999999762
Q ss_pred -----EEEEecCCcCCCccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 423 -----KAYVAQSPWIQSGKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 423 -----~~~v~Q~~~~~~~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
++|+||++.++..|++||+.++.. .. .++.+++++..++.+.+. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 689999999888999999987521 11 234556677777753221 1234556799999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHH
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDIL 567 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 567 (1156)
|++||||++.+|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999988876644 33589999999999875 59999999999999999998876
Q ss_pred h
Q 037346 568 N 568 (1156)
Q Consensus 568 ~ 568 (1156)
.
T Consensus 232 ~ 232 (247)
T TIGR00972 232 T 232 (247)
T ss_pred h
Confidence 4
No 179
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.9e-37 Score=339.44 Aligned_cols=198 Identities=25% Similarity=0.433 Sum_probs=168.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------EEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------KAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------~~~ 425 (1156)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 68999999996 357999999999999999999999999999999999999999999999873 689
Q ss_pred EecCCcC-CCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 426 VAQSPWI-QSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 426 v~Q~~~~-~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
++|++.+ +..|++||+.++.. .. .++..+.++..++.+. .+..+.+||||||||++||||+
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAER-----------ADDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHHH
Confidence 9999977 46799999986532 22 1234455555555432 3455678999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
+.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999998876644 248999999999999877999999999999999998887653
No 180
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=328.68 Aligned_cols=203 Identities=30% Similarity=0.382 Sum_probs=175.8
Q ss_pred cEEEeeeEEEeCCCC---------------------CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCc
Q 037346 357 AIEIIDGSFSWDFSS---------------------PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESG 415 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~---------------------~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G 415 (1156)
.|+++|+++-+..++ ...-++|+||+++.||+.+|.|-||||||||++++.|+++|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 478888888776431 12347999999999999999999999999999999999999999
Q ss_pred EEEEcCe-----------------EEEEecCCcCCC-ccHHHHhhcCCCC-------CHHHHHHHHHHhCCchhhhhCCC
Q 037346 416 IIRLCGT-----------------KAYVAQSPWIQS-GKIEENILFGKEM-------DRERYERVLEACSLKKDLEVLPF 470 (1156)
Q Consensus 416 ~i~~~g~-----------------~~~v~Q~~~~~~-~ti~eni~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~ 470 (1156)
+|.++|. +++|+|+.-+++ .||.||+.||.+. .+++..++++..+|..+-...|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-
Confidence 9999983 689999987764 5999999999753 2355667888889988777666
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCc-cccC
Q 037346 471 GDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEF-LPAA 546 (1156)
Q Consensus 471 g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~-~~~~ 546 (1156)
.+||||+||||.|||||..+|||+|+|||||||||--+.++-+.++. .-+||+|+||||++. ++..
T Consensus 163 ----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 163 ----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 58999999999999999999999999999999999998888776654 347999999999987 5779
Q ss_pred CEEEEEeCCeEEEccChHHHHhcC
Q 037346 547 DLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 547 d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
|||.+|++|+|++.|+++|+..+.
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCc
Confidence 999999999999999999998654
No 181
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-37 Score=345.48 Aligned_cols=198 Identities=31% Similarity=0.457 Sum_probs=170.5
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------E
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------K 423 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------~ 423 (1156)
++++|++++|+. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999952 346999999999999999999999999999999999999999999999872 6
Q ss_pred EEEecCCc--CCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 424 AYVAQSPW--IQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 424 ~~v~Q~~~--~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+|++|+|. +++.|++|||.++.. .+ .++.+++++.+++..... ..+..||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRH-----------RSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhc-----------CCcccCCHHHHHHHHHH
Confidence 89999986 466799999988632 12 234556677777755433 34568999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHh
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||+.+|+++||||||++||+.++..+.+.+.. .+|.|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999988876643 35899999999999987899999999999999999988764
No 182
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-37 Score=342.36 Aligned_cols=204 Identities=25% Similarity=0.340 Sum_probs=171.2
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcCe--------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCGT-------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g~-------- 422 (1156)
..++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYT---DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeC---CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 3699999999996 34699999999999999999999999999999999999997 4899998762
Q ss_pred -------EEEEecCCcCCCccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 423 -------KAYVAQSPWIQSGKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 423 -------~~~v~Q~~~~~~~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
++|++|++.+++.|++|||.++.. .+ +++..++++.+++.+.+. .....++.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcccCCHHH
Confidence 689999999888999999988632 11 233455666666643221 11234678999999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||++|||||+.+|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999998876644 34689999999999875 599999999999999999998
Q ss_pred HHhc
Q 037346 566 ILNS 569 (1156)
Q Consensus 566 l~~~ 569 (1156)
+.+.
T Consensus 236 ~~~~ 239 (254)
T PRK14273 236 LFFN 239 (254)
T ss_pred HHhC
Confidence 8643
No 183
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.7e-37 Score=354.14 Aligned_cols=200 Identities=26% Similarity=0.390 Sum_probs=171.1
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------ 422 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------ 422 (1156)
...|+++|++++|+ +..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 39 ~~~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 39 TVAIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred ceeEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 34699999999996 357999999999999999999999999999999999999999999999883
Q ss_pred EEEEecCCcCC-CccHHHHhhcCC---CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 423 KAYVAQSPWIQ-SGKIEENILFGK---EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 423 ~~~v~Q~~~~~-~~ti~eni~~~~---~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
++|+||++.++ ..|++||+.+.. ..+ .++.+++++.++|.+.. ..+..+||||||||++||
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~-----------~~~~~~LS~G~kqrv~lA 184 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-----------DARVSDLSGGMKRRLTLA 184 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------CCChhhCCHHHHHHHHHH
Confidence 79999999886 569999997521 112 23344566666664432 244568999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||+++|+++||||||++||+.++.++.+.+.. ..|+|+|++||+++.+. .||+|++|++|+++..|+++++..
T Consensus 185 ~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 185 RALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999999887644 35899999999999986 599999999999999999998864
No 184
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=345.29 Aligned_cols=201 Identities=29% Similarity=0.430 Sum_probs=173.8
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|+++.|+. .++++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|. +
T Consensus 5 ~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 5899999999963 2356999999999999999999999999999999999999999999999983 6
Q ss_pred EEEecCC--cCCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 424 AYVAQSP--WIQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 424 ~~v~Q~~--~~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+|++|+| .+++.|++|||.++.. .. .++..++++.++|.+.+... ..+||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNRE-----------PHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHHHHH
Confidence 8999998 4567899999988632 12 23466777888887655543 358999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|||+.+|+++||||||++||+.+++.+++.+.. . .|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999886644 2 37999999999998878999999999999999998887653
No 185
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.5e-37 Score=329.62 Aligned_cols=188 Identities=27% Similarity=0.408 Sum_probs=162.9
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------e
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------T 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------~ 422 (1156)
+.++++|++++|+.. +.++++|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999632 24799999999999999999999999999999999999999999999987 3
Q ss_pred EEEEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 423 KAYVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
++|++|+|.++++|++||+.+...++.++..+.++ +++++.+|||||+||++||||++.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 79999999999999999998755444333322222 235678999999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccC
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGK 562 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~ 562 (1156)
++||||||++||+.+.+.+.+.+.. .+++|+|++||+++.+..||++++|++|++.+.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 9999999999999999988776654 45789999999999887799999999999988775
No 186
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-37 Score=339.28 Aligned_cols=200 Identities=27% Similarity=0.401 Sum_probs=168.7
Q ss_pred EEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 358 IEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
++++|++++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999996321 127999999999999999999999999999999999999999999999863
Q ss_pred --EEEEecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 423 --KAYVAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 423 --~~~v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
++|+||+|.++. .|++||+.++.. .+ .++..+.++..++.+.++ ....+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKAD-----------AYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhh-----------cChhhCCHHHHHHHH
Confidence 689999999886 699999987521 22 234455666666654433 345689999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
||||++.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999988876643 2 3889999999999886 599999999999999998887653
No 187
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.3e-37 Score=335.39 Aligned_cols=188 Identities=31% Similarity=0.503 Sum_probs=159.4
Q ss_pred EEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------EEEEecCC
Q 037346 359 EIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------KAYVAQSP 430 (1156)
Q Consensus 359 ~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------~~~v~Q~~ 430 (1156)
+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|++|+|
T Consensus 1 ~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~ 77 (213)
T cd03235 1 EVEDLTVSYG---GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRR 77 (213)
T ss_pred CcccceeEEC---CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecccc
Confidence 3679999996 346999999999999999999999999999999999999999999999983 89999998
Q ss_pred cC---CCccHHHHhhcCCCC-----------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHh
Q 037346 431 WI---QSGKIEENILFGKEM-----------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARP 496 (1156)
Q Consensus 431 ~~---~~~ti~eni~~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAra 496 (1156)
.+ ++.|++||+.++... .+++.+++++.+++.+..+ ....+||||||||++||||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la~a 146 (213)
T cd03235 78 SIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVLLARA 146 (213)
T ss_pred ccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHHHH
Confidence 76 457999999875321 1245666777777765443 3446899999999999999
Q ss_pred hccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 497 LYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 497 l~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
|+.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||+|++|++| +++.|
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 147 LVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999988876644 36789999999999886 59999999886 55443
No 188
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.9e-37 Score=336.70 Aligned_cols=196 Identities=29% Similarity=0.449 Sum_probs=164.6
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------E
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------K 423 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------~ 423 (1156)
++++|++++|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYG---KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecC---CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 46899999996 347999999999999999999999999999999999999999999999872 6
Q ss_pred EEEecCCcCCCc-cHHHHhhcCCCCC-----HHHHHHHHHHh-CCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHh
Q 037346 424 AYVAQSPWIQSG-KIEENILFGKEMD-----RERYERVLEAC-SLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARP 496 (1156)
Q Consensus 424 ~~v~Q~~~~~~~-ti~eni~~~~~~~-----~~~~~~~~~~~-~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAra 496 (1156)
+|++|++.++.. |++||+.++.... .++..++++.+ ++.. ....++.+||||||||++||||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-----------~~~~~~~~LS~G~~qrv~lara 146 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFPRLKE-----------RRKQLAGTLSGGEQQMLAIARA 146 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhhh-----------hhhCchhhCCHHHHHHHHHHHH
Confidence 899999988775 9999998764321 12233444443 2222 2245667899999999999999
Q ss_pred hccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHH
Q 037346 497 LYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDIL 567 (1156)
Q Consensus 497 l~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 567 (1156)
++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 147 LMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999988876644 35789999999999875 59999999999999999887764
No 189
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.5e-37 Score=335.03 Aligned_cols=190 Identities=30% Similarity=0.424 Sum_probs=161.9
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----------eEEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-----------TKAYV 426 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-----------~~~~v 426 (1156)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 1 i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFG---NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEEC---CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 46899999996 34799999999999999999999999999999999999999999999987 27999
Q ss_pred ecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 427 AQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 427 ~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
+|++.++. .|++||+.++.. .. +++..++++.+++.+..+ ....+||||||||++||||++
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~laral~ 146 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLD-----------RKPKQLSGGQRQRVALGRAIV 146 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHh-----------CChhhCCHHHHHHHHHHHHHh
Confidence 99998875 599999987521 22 223455666666654433 345689999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
.+|+++||||||++||+.+++.+.+.+.. ..++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 147 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 147 REPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999998876644 24899999999999876 49999999999998765
No 190
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.5e-37 Score=350.28 Aligned_cols=199 Identities=25% Similarity=0.396 Sum_probs=169.4
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------E
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------K 423 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------~ 423 (1156)
..++++|++++|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~~i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 3589999999996 357999999999999999999999999999999999999999999999873 7
Q ss_pred EEEecCCcCCC-ccHHHHhhcC-C--CCCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHH
Q 037346 424 AYVAQSPWIQS-GKIEENILFG-K--EMDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIAR 495 (1156)
Q Consensus 424 ~~v~Q~~~~~~-~ti~eni~~~-~--~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAr 495 (1156)
+|+||++.++. .|++||+.+. . ..+. ++.+++++.+++.+.. .....+||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-----------DVRVALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHh-----------cCchhhCCHHHHHHHHHHH
Confidence 99999998774 6999999742 1 1222 2344566666664432 2345689999999999999
Q ss_pred hhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 496 PLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 496 al~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
||+.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+. .||+|++|++|+++..|+++++..
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999998876644 35899999999999986 599999999999999999988764
No 191
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.5e-37 Score=345.79 Aligned_cols=199 Identities=27% Similarity=0.424 Sum_probs=174.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------eEE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------TKA 424 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------~~~ 424 (1156)
.++++|+++.|+. ++.+|+|+||+|++|+++|++||||||||||+++|+|++.|++|+|.++| ++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheE
Confidence 4788999999962 36899999999999999999999999999999999999999999999998 379
Q ss_pred EEecCCcCCC-ccHHHHhhcCC-----C--CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHh
Q 037346 425 YVAQSPWIQS-GKIEENILFGK-----E--MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARP 496 (1156)
Q Consensus 425 ~v~Q~~~~~~-~ti~eni~~~~-----~--~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAra 496 (1156)
|+||+|.++. .|++||+.|.. + .++++.+++++..+|.+.. ..+..+||+|||||++||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHHH
Confidence 9999998765 59999998732 2 3356788999999987622 24457899999999999999
Q ss_pred hccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCC-CEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHh
Q 037346 497 LYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSS-KTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 497 l~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~-~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|.++|++|||||||++|||..+..+.+.+.. .+| +||+++||.++.+.. ||+|++|++|+++..|+.+++..
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 9999999999999999999999999887644 345 799999999999875 99999999999999999888754
No 192
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.2e-37 Score=338.44 Aligned_cols=197 Identities=28% Similarity=0.412 Sum_probs=166.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------E
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------K 423 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------~ 423 (1156)
++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 46899999996 346999999999999999999999999999999999999999999999872 6
Q ss_pred EEEecCCcCCCc-cHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHH
Q 037346 424 AYVAQSPWIQSG-KIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIAR 495 (1156)
Q Consensus 424 ~~v~Q~~~~~~~-ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAr 495 (1156)
+|++|++.++.. |++||+.++.. .. .++.++.++.+++.+. ..+...+||||||||++|||
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~ 146 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHL-----------RKSKASSLSGGERRRVEIAR 146 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHHHHHH
Confidence 899999988775 99999987532 11 1234455666655432 23556789999999999999
Q ss_pred hhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 496 PLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 496 al~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|++.+|+++||||||++||+.+++.+.+.+.. ..++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 147 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 147 ALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 99999999999999999999999988876543 35889999999998765 599999999999999999887653
No 193
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-37 Score=346.34 Aligned_cols=197 Identities=29% Similarity=0.380 Sum_probs=167.9
Q ss_pred EEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----------------
Q 037346 359 EIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG----------------- 421 (1156)
Q Consensus 359 ~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g----------------- 421 (1156)
.++|+++.|+ +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4567777775 45789999999999999999999999999999999999999999999976
Q ss_pred eEEEEecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 422 TKAYVAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 422 ~~~~v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
+++|++|++.++. .|++||+.++.. .+ .+++.++++.+++.+.+... ..+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKY-----------PDELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------cccCCHHHHHHHHH
Confidence 2789999998874 699999987521 11 24556777778876555433 35899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|||++.+|+++||||||++||+.+++.+.+.+.. ..|+|+|++||+++.+. .||++++|++|++++.|+++++.+.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999998876643 24799999999999875 5999999999999999999988753
No 194
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=353.45 Aligned_cols=202 Identities=23% Similarity=0.352 Sum_probs=171.7
Q ss_pred CCCCCCCeEEEEEEEEEEcCCC---------------CceeeCCCCCCHHHHHHHHhhccc-----CCCceEEEcCeeCC
Q 037346 940 NSRPSHGEVNIRHLQVRYAPNL---------------PLVLRGRTGSGKSTLIQTLFRIVE-----STAGHILIDGKDIS 999 (1156)
Q Consensus 940 ~~~p~~g~I~~~~Vsf~Y~~~~---------------~~vL~G~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~ 999 (1156)
..||..+.|+|+||+++|+++. .++|.||||||||||+++|+|+++ |++|+|.|||+|+.
T Consensus 73 ~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~ 152 (329)
T PRK14257 73 EDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTR 152 (329)
T ss_pred CCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 3589889999999999996432 235669999999999999999997 57999999999997
Q ss_pred --CCChHHHhhcCeeeccccccccccchhccCCCC---CCCHHH-----HHHHHHHcCCChHH----HhhcCCcccc---
Q 037346 1000 --LIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLE---EHADEQ-----IWEALDKCQLGDEV----RKKKGKLDSQ--- 1062 (1156)
Q Consensus 1000 --~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~---~~~dee-----i~~al~~~~l~~~i----~~lp~gl~s~--- 1062 (1156)
++++..+|++++||||+|.+|++|+++||+++. ..++++ +.++++.+++++.+ ...+..|..+
T Consensus 153 ~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkq 232 (329)
T PRK14257 153 SKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQ 232 (329)
T ss_pred ccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHH
Confidence 456678999999999999999999999998532 234433 56788999986443 2323333322
Q ss_pred ----ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHh
Q 037346 1063 ----GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLL 1137 (1156)
Q Consensus 1063 ----ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl 1137 (1156)
|||++++|+|||||||||+||+++.+.+++.|+++++++|+|+|||+++++.+ ||||+||++|+|+|.|+|++++
T Consensus 233 Rl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 233 RLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIF 312 (329)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 89999999999999999999999999999999999889999999999999988 9999999999999999999999
Q ss_pred cCCC
Q 037346 1138 ENKS 1141 (1156)
Q Consensus 1138 ~~~~ 1141 (1156)
.++.
T Consensus 313 ~~~~ 316 (329)
T PRK14257 313 IHPK 316 (329)
T ss_pred cCCC
Confidence 7654
No 195
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-37 Score=346.03 Aligned_cols=200 Identities=25% Similarity=0.410 Sum_probs=172.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.++++|++++|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 5899999999962 357999999999999999999999999999999999999999999999873
Q ss_pred -EEEEecCC--cCCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 423 -KAYVAQSP--WIQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 423 -~~~v~Q~~--~~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
++|++|+| .+++.|++||+.++.. .. .++.+++++.++|.... ...+.+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHHH
Confidence 68999998 4678899999987531 12 23456677777775433 3456799999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||||+.+|+++||||||++||+.++..+.+.+.. . .|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999988776643 2 3899999999999986 599999999999999999998865
Q ss_pred c
Q 037346 569 S 569 (1156)
Q Consensus 569 ~ 569 (1156)
.
T Consensus 232 ~ 232 (283)
T PRK13636 232 E 232 (283)
T ss_pred C
Confidence 3
No 196
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-37 Score=346.62 Aligned_cols=202 Identities=26% Similarity=0.420 Sum_probs=170.4
Q ss_pred cEEEeeeEEEeCCCC--CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------
Q 037346 357 AIEIIDGSFSWDFSS--PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------ 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------ 422 (1156)
.++++|++++|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 246999999999999999999999999999999999999999999999873
Q ss_pred -----EEEEecCC--cCCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 423 -----KAYVAQSP--WIQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 -----~~~v~Q~~--~~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
++|++|+| .++..|++||+.++.. .. .++.+++++.+++.... ......+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL----------ISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH----------hhCCcccCCHHHH
Confidence 58999998 4677899999987531 22 23456667777775222 1344578999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
||++|||||+.+|+++||||||++||+.+++.+.+.+.. .+|.|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKE 231 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999988776543 35899999999999875 599999999999999999988
Q ss_pred HHh
Q 037346 566 ILN 568 (1156)
Q Consensus 566 l~~ 568 (1156)
+..
T Consensus 232 ~~~ 234 (287)
T PRK13641 232 IFS 234 (287)
T ss_pred Hhc
Confidence 764
No 197
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-35 Score=313.44 Aligned_cols=471 Identities=17% Similarity=0.159 Sum_probs=303.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-----cc-hhhHH--HHHHHHHHHHHHHHHHHHH
Q 037346 72 AKVLFFSAWQEILFIAILALLYTLATYVGPYLIDNFVQYLNGRQAF-----EY-EGYVL--CLSERHWFFQVQQFGIRFR 143 (1156)
Q Consensus 72 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~~i~~~~~~~~~-----~~-~g~~l--~~~~~~~~~~~~~~~~~~r 143 (1156)
...++|.+++.++..+.+.++..+.... ++..+-+++...... .+ .|.++ .++..........+|.++-
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~~g~~---lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~is~lg~t~~gq~~I 80 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGALGIG---LLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLISQLGLTTLGQHFI 80 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4457888888888877777766654443 333333443322111 12 22222 1111112223445566666
Q ss_pred HHHHHHHHHHHhcCCccccCCCCHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHH
Q 037346 144 ATLFAMIYNKGLTLSGQAKQGNTSGEIINLIAVDAER--------------------ALLILYKKLGLASIATLLATAIV 203 (1156)
Q Consensus 144 ~~l~~~i~~k~l~l~~~~~~~~~~g~i~nl~s~D~~~--------------------~~~ll~~~lg~~~l~~~~~~~~~ 203 (1156)
..++..+-+|++.-+....++.+++.++..++.|+.. +...|++.-+.+....++++++.
T Consensus 81 ~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~ 160 (546)
T COG4615 81 YKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVT 160 (546)
T ss_pred HHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 7777778888888888778888999999999999976 12222333333333333334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH---HH---H-HHHHH-HHHHHHHH-HHHHHHH
Q 037346 204 MLANFPLGRLREKFQDKFMETKDRRIKATSEILRNMRILKLQGWELKK---NE---T-AWLKK-SVYTEAMI-SFFCWGA 274 (1156)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~r~---~e---~-~~~~~-~~~~~~~~-~~~~~~~ 274 (1156)
+..+........+......+.-|+-.+..+.++.|-|..+++.--.+. .+ - ...++ ..+...+. ....|..
T Consensus 161 ~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~n 240 (546)
T COG4615 161 IWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSN 240 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHH
Confidence 444444433444444555556667778888999999998876532000 00 0 01111 11111111 1122333
Q ss_pred HHHHHHHHHHHHHHhCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCC
Q 037346 275 PTFVSVVTFGSCILLGIPL-ESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEGLQTDVLEKMPRGN 353 (1156)
Q Consensus 275 ~~~~~~~~f~~~~~~~~~l-t~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~~~~~~~~~~~~~~ 353 (1156)
..+...+....|+...-.. +...+.|+...+..++.|+.++...++.+..|.++++||.++=..|+...-... .+. +
T Consensus 241 i~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~~-q~~-p 318 (546)
T COG4615 241 IMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPRP-QAF-P 318 (546)
T ss_pred HHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCCC-CcC-C
Confidence 3333333322222222122 122444555555667899999999999999999999999998665543221111 111 1
Q ss_pred CCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCeE----------
Q 037346 354 SDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGTK---------- 423 (1156)
Q Consensus 354 ~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~~---------- 423 (1156)
.=..++++|+.|+|+. ...-+..||++|++||++.|+|.||||||||++++.|++.|++|+|.+||+.
T Consensus 319 ~~~~lelrnvrfay~~--~~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR 396 (546)
T COG4615 319 DWKTLELRNVRFAYQD--NAFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYR 396 (546)
T ss_pred cccceeeeeeeeccCc--ccceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHH
Confidence 1235999999999974 3478999999999999999999999999999999999999999999999962
Q ss_pred ---EEEecCCcCCCccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhcc
Q 037346 424 ---AYVAQSPWIQSGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQ 499 (1156)
Q Consensus 424 ---~~v~Q~~~~~~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~ 499 (1156)
+-|+-+-|+|+.++ -+.. .+++..++.++...+...... .+|.-+ ...||-|||.|+|+--|++-
T Consensus 397 ~LfSavFsDyhLF~~ll-----~~e~~as~q~i~~~LqrLel~~ktsl-~d~~fs-----~~kLStGQkKRlAll~AllE 465 (546)
T COG4615 397 KLFSAVFSDYHLFDQLL-----GPEGKASPQLIEKWLQRLELAHKTSL-NDGRFS-----NLKLSTGQKKRLALLLALLE 465 (546)
T ss_pred HHHHHHhhhHhhhHhhh-----CCccCCChHHHHHHHHHHHHhhhhcc-cCCccc-----ccccccchHHHHHHHHHHHh
Confidence 22333444443322 1222 456677777777766654332 122111 24699999999999999999
Q ss_pred CCCeeeeeCCCCCcCHHHHHHHHHHHH---hcCCCEEEEEccCCCccccCCEEEEEeCCeEEEc
Q 037346 500 DADIFLLDDPFSPVDDHTGAHLFKFCW---VSSSKTVIYATHQVEFLPAADLILVIKDGKITQA 560 (1156)
Q Consensus 500 ~~~illlDep~s~lD~~~~~~i~~~~~---~~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~ 560 (1156)
+-||+++||=-+--||.-+++.++.++ +..||||+.||||-.+...|||++.|++|++++.
T Consensus 466 eR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 466 ERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred hCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999998888653 3679999999999999999999999999999864
No 198
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-37 Score=340.93 Aligned_cols=203 Identities=28% Similarity=0.395 Sum_probs=172.2
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g--------- 421 (1156)
+.++++|+++.|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 12 ~~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 12 SKIQVRNLNFYYG---KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred ceEEEEEEEEEeC---CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 4699999999996 3479999999999999999999999999999999999986 5899999876
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCC----CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKE----MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~----~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
+++|++|+|.++..|++||+.++.. .+. ++.+++++.+++...+. ...++...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHHH
Confidence 2689999999888999999987532 222 34556677776643321 23356678999999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||++||||++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|+.++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999988876644 34689999999999885 599999999999999999988
Q ss_pred HHh
Q 037346 566 ILN 568 (1156)
Q Consensus 566 l~~ 568 (1156)
+.+
T Consensus 242 ~~~ 244 (260)
T PRK10744 242 IFT 244 (260)
T ss_pred HHh
Confidence 764
No 199
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.8e-37 Score=334.26 Aligned_cols=193 Identities=21% Similarity=0.344 Sum_probs=163.3
Q ss_pred EEEeeeEEEeCCCCC-CCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------eEE
Q 037346 358 IEIIDGSFSWDFSSP-NPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------TKA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~-~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------~~~ 424 (1156)
++++|++++|+.... .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 689999999963211 2699999999999999999999999999999999999999999999987 378
Q ss_pred EEecCCcCCCc-cHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHh
Q 037346 425 YVAQSPWIQSG-KIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARP 496 (1156)
Q Consensus 425 ~v~Q~~~~~~~-ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAra 496 (1156)
|++|+|.++.. |++||+.+... .. .++..++++.+++.+.+ .+.+.+||||||||++||||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~lara 150 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELL-----------DRRVGGFSTGMRQKVAIARA 150 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hhhhhhcCHHHHHHHHHHHH
Confidence 99999988874 99999976421 11 23456677777765443 34567899999999999999
Q ss_pred hccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 497 LYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 497 l~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
++.+|+++||||||++||+.+.+.+.+.+.. .+|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999988876644 35889999999999876 59999999999998754
No 200
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=309.03 Aligned_cols=199 Identities=22% Similarity=0.325 Sum_probs=171.4
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------eEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------TKAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------~~~~ 425 (1156)
+++.+++++|++ ...+++|+||+++.||+++|.|||||||||+|+.|.+++.|++|.|.++| ++|.
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcce
Confidence 688999999974 34589999999999999999999999999999999999999999999998 3677
Q ss_pred EecCCcCC-CccHHHHhhcCCC-------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 426 VAQSPWIQ-SGKIEENILFGKE-------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 426 v~Q~~~~~-~~ti~eni~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
++-+.-++ ..|++|||.|... ..+.+..++.+..+|.+.++ ++..++|-||||||+|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~-----------rRv~~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLD-----------RRVGEFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHH-----------HHHhhhchhhHHHHHHHHHH
Confidence 77555554 5699999986421 22567777888888876554 45568999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
.+||++++||||||+||..+.+.+.+.+.+ ..|++||+.||.++.++ .||+|+++++|+++..|+.+++.+.
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 999999999999999999999888776654 45899999999999998 5999999999999999999988653
No 201
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-37 Score=332.37 Aligned_cols=189 Identities=23% Similarity=0.370 Sum_probs=161.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------eEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------TKAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------~~~~ 425 (1156)
++++|++|.|+ +.++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~---~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYG---KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEEC---CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEE
Confidence 47899999996 347999999999999 9999999999999999999999999999999987 2789
Q ss_pred EecCCcCCCc-cHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 426 VAQSPWIQSG-KIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 426 v~Q~~~~~~~-ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
++|+|.++.. |++||+.+... .+ .++.+++++.+++.+..+ ....+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHHHHH
Confidence 9999998875 99999986421 11 234566777777765433 34468999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
+++|+++||||||++||+.+++++.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999877644 34689999999999986 59999999999998764
No 202
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.7e-37 Score=342.40 Aligned_cols=200 Identities=25% Similarity=0.328 Sum_probs=170.0
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 6 NLVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred ceEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 3589999999996 357999999999999999999999999999999999999999999999872
Q ss_pred ---EEEEecCCcCCCc-cHHHHhhcCC----CCCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 ---KAYVAQSPWIQSG-KIEENILFGK----EMDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 ---~~~v~Q~~~~~~~-ti~eni~~~~----~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
++|++|++.++.. |+.||+.++. ..+. ++..+.++.+++.+... ....+||||||||
T Consensus 83 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qr 151 (269)
T PRK11831 83 RKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAK-----------LMPSELSGGMARR 151 (269)
T ss_pred hhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 6899999988875 9999998642 1222 23445666666654332 3456899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHH
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 566 (1156)
++|||||+.+|+++||||||++||+.+++.+.+.+.. ..|+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (269)
T PRK11831 152 AALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQAL 231 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999988776643 237899999999998864 999999999999999999988
Q ss_pred Hhc
Q 037346 567 LNS 569 (1156)
Q Consensus 567 ~~~ 569 (1156)
.+.
T Consensus 232 ~~~ 234 (269)
T PRK11831 232 QAN 234 (269)
T ss_pred hcC
Confidence 754
No 203
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.7e-37 Score=337.36 Aligned_cols=197 Identities=28% Similarity=0.419 Sum_probs=168.1
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------------e
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG---------------T 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g---------------~ 422 (1156)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 68999999996 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|++.++. .|++||+.++.. .+ .++..++++..++.+.+ ..+..+||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERA-----------HHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHH-----------hcChhhcCHHHHHHHHH
Confidence 689999998775 699999987531 12 23345566666664433 34457899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIK 225 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhc
Confidence 9999999999999999999999999988876543 35899999999999986 499999999999999999888764
No 204
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-37 Score=343.78 Aligned_cols=201 Identities=30% Similarity=0.424 Sum_probs=172.8
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCC---cEEEEcCe----------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKES---GIIRLCGT---------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~---G~i~~~g~---------- 422 (1156)
..++++|++|.|+.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 469999999999632 3469999999999999999999999999999999999999987 89999873
Q ss_pred ---EEEEecCCc--CCCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 ---KAYVAQSPW--IQSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 ---~~~v~Q~~~--~~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
++|++|+|. +++.|+.||+.|+.. .+. ++..++++.+++.+... ....+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYID-----------SEPANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHHHHH
Confidence 699999984 567899999988632 222 34566777788765444 3346899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHH
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDIL 567 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 567 (1156)
++|||||+.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999998876643 2 388999999999988789999999999999999998876
Q ss_pred h
Q 037346 568 N 568 (1156)
Q Consensus 568 ~ 568 (1156)
.
T Consensus 232 ~ 232 (282)
T PRK13640 232 S 232 (282)
T ss_pred c
Confidence 4
No 205
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5e-37 Score=340.42 Aligned_cols=200 Identities=26% Similarity=0.427 Sum_probs=170.7
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
+.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 4699999999996 357999999999999999999999999999999999999999999998872
Q ss_pred -------------EEEEecCCcCCC-ccHHHHhhcCC----CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCC
Q 037346 423 -------------KAYVAQSPWIQS-GKIEENILFGK----EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERG 480 (1156)
Q Consensus 423 -------------~~~v~Q~~~~~~-~ti~eni~~~~----~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g 480 (1156)
++|+||++.++. .|++||+.++. ..+ +++..++++..++...+. +...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCCc
Confidence 699999999886 59999998642 112 234555666666654321 2455
Q ss_pred CCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeE
Q 037346 481 INLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKI 557 (1156)
Q Consensus 481 ~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i 557 (1156)
.+||||||||++|||||+++|+++||||||++||+.+.+.+.+.+.. .+|+|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 78999999999999999999999999999999999999998876543 358999999999999875 999999999999
Q ss_pred EEccChHHHHh
Q 037346 558 TQAGKYSDILN 568 (1156)
Q Consensus 558 ~~~g~~~~l~~ 568 (1156)
++.|+++++..
T Consensus 231 ~~~~~~~~~~~ 241 (257)
T PRK10619 231 EEEGAPEQLFG 241 (257)
T ss_pred EEeCCHHHhhh
Confidence 99999988764
No 206
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-37 Score=341.13 Aligned_cols=204 Identities=25% Similarity=0.361 Sum_probs=172.7
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC--------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG-------- 421 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g-------- 421 (1156)
+..|+++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 17 ~~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 45799999999996 35799999999999999999999999999999999999975 899999987
Q ss_pred -------eEEEEecCCcCCCccHHHHhhcCCC---C--C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCH
Q 037346 422 -------TKAYVAQSPWIQSGKIEENILFGKE---M--D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSG 485 (1156)
Q Consensus 422 -------~~~~v~Q~~~~~~~ti~eni~~~~~---~--~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSg 485 (1156)
.++|++|+|.++..|++||+.++.. . . .++.+++++.+++.+.+. ...++.+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 2689999999888899999987531 1 1 234466777777754321 123456779999
Q ss_pred HHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccCh
Q 037346 486 GQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKY 563 (1156)
Q Consensus 486 GqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~ 563 (1156)
|||||++|||||+.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999988776644 34689999999999985 5999999999999999999
Q ss_pred HHHHh
Q 037346 564 SDILN 568 (1156)
Q Consensus 564 ~~l~~ 568 (1156)
+++..
T Consensus 247 ~~~~~ 251 (267)
T PRK14235 247 EKMFT 251 (267)
T ss_pred HHHHh
Confidence 88764
No 207
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-37 Score=355.78 Aligned_cols=185 Identities=26% Similarity=0.387 Sum_probs=161.2
Q ss_pred CccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----------------eEEEEecCCcCCC-c
Q 037346 374 PTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-----------------TKAYVAQSPWIQS-G 435 (1156)
Q Consensus 374 ~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-----------------~~~~v~Q~~~~~~-~ 435 (1156)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 479999999999999999999999999999999999999999999987 3799999998886 5
Q ss_pred cHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeC
Q 037346 436 KIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDD 508 (1156)
Q Consensus 436 ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDe 508 (1156)
|++||+.++.. ++ .++..++++.++|.+..+. ...+||||||||++|||||+.+|++|||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~-----------~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS-----------YPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhc-----------CcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999998632 22 2455667788888655543 346899999999999999999999999999
Q ss_pred CCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 509 PFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 509 p~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
||++||+.+++.+.+.+.. ..++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999998876644 24899999999999875 5999999999999999999998764
No 208
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.1e-37 Score=332.96 Aligned_cols=190 Identities=25% Similarity=0.386 Sum_probs=160.4
Q ss_pred EEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------------
Q 037346 358 IEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------- 421 (1156)
++++|++++|+... ..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996321 24699999999999999999999999999999999999999999999986
Q ss_pred --eEEEEecCCcCCC-ccHHHHhhcCC---CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 422 --TKAYVAQSPWIQS-GKIEENILFGK---EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 422 --~~~~v~Q~~~~~~-~ti~eni~~~~---~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
.++|++|++.++. .|++||+.++. ..+ .++..++++.+++.+.+. ....+||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRIN-----------HRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHH
Confidence 2799999998875 59999998742 122 234456666666654333 44568999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEeCCeEE
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIKDGKIT 558 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~ 558 (1156)
+||||++.+|+++||||||++||+.+++.+.+.+.. ..++|+|++||+++.+..+|+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 999999999999999999999999999988876643 2478999999999988779999999999975
No 209
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-37 Score=340.86 Aligned_cols=201 Identities=31% Similarity=0.450 Sum_probs=171.3
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..++++|+++.|+. +++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 6 VMIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred eEEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 36899999999963 2357999999999999999999999999999999999999999999999872
Q ss_pred EEEEecCCc--CCCccHHHHhhcCCC---CCHH----HHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 KAYVAQSPW--IQSGKIEENILFGKE---MDRE----RYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 ~~~v~Q~~~--~~~~ti~eni~~~~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|+|. ++..|++||+.++.. .+.+ +..++++.+++.+.++ ....+||||||||++|
T Consensus 85 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~l 153 (271)
T PRK13632 85 IGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLD-----------KEPQNLSGGQKQRVAI 153 (271)
T ss_pred eEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CCcccCCHHHHHHHHH
Confidence 689999983 556799999987531 2222 3456677777765443 3456899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cC-CCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHh
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SS-SKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~-~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
||||+.+|+++||||||++||+.+++.+++.+.. .+ ++|+|++||+++.+..||++++|++|++.+.|+.+++..
T Consensus 154 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 154 ASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999998877644 23 589999999999887899999999999999999887754
No 210
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-37 Score=331.17 Aligned_cols=190 Identities=25% Similarity=0.417 Sum_probs=161.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------eEEEEec
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG---------TKAYVAQ 428 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g---------~~~~v~Q 428 (1156)
++++|+++.|+ ++++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEecc
Confidence 46899999996 35799999999999999999999999999999999999999999999988 3799999
Q ss_pred CCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 429 SPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 429 ~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
++.++. .|++||+.+... .. +++..+.++..++.... .....+||||||||++||||++.+
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYA-----------NKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHH-----------hCcHhhCCHHHHHHHHHHHHHhcC
Confidence 998876 499999986421 11 23455666666665433 244578999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999988876643 35789999999999875 59999999999998754
No 211
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-37 Score=337.87 Aligned_cols=200 Identities=30% Similarity=0.418 Sum_probs=168.2
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~ 424 (1156)
++++|++++|+. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGG--GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCC--cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 468999999963 156999999999999999999999999999999999999999999999873 68
Q ss_pred EEecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHh
Q 037346 425 YVAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARP 496 (1156)
Q Consensus 425 ~v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAra 496 (1156)
|++|+|.++. .|++||+.++.. .+ .++..++++..++... ....+.+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---------~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPA---------EFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcH---------HHHhcChhhCCHHHHHHHHHHHH
Confidence 9999998885 699999987532 12 2345566666666530 11235567899999999999999
Q ss_pred hccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 497 LYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 497 l~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
++.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999999988876644 2 3899999999999875 599999999999999999887754
No 212
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-37 Score=344.38 Aligned_cols=201 Identities=26% Similarity=0.412 Sum_probs=168.6
Q ss_pred EEEeeeEEEeCCCC--CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 358 IEIIDGSFSWDFSS--PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~--~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
++++|++++|+... ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999996321 146999999999999999999999999999999999999999999999872
Q ss_pred ----EEEEecCC--cCCCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 423 ----KAYVAQSP--WIQSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 423 ----~~~v~Q~~--~~~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
++|++|+| .+++.|++||+.++.. .+. ++.+++++.+++.... ......+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESL----------FEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------hhCCcccCCHHHHH
Confidence 68999998 5777899999987531 222 2334555666664221 23456789999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
|++||||++.+|+++||||||++||+.+++.+.+.+.. ..++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999988876643 34789999999999885 5999999999999999999887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
..
T Consensus 233 ~~ 234 (280)
T PRK13649 233 FQ 234 (280)
T ss_pred hc
Confidence 64
No 213
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=341.42 Aligned_cols=202 Identities=27% Similarity=0.363 Sum_probs=173.6
Q ss_pred cEEEeeeEEEeCCCC---CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------
Q 037346 357 AIEIIDGSFSWDFSS---PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT----------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~---~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~----------- 422 (1156)
.++++|++++|+... ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 589999999997321 257999999999999999999999999999999999999999999999872
Q ss_pred ---EEEEecCCc--CCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 ---KAYVAQSPW--IQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 ---~~~v~Q~~~--~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
++|++|+|. ++..|+.||+.|+.. .+ +++++++++.++|.+.+.. ...+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRH-----------APHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHH
Confidence 689999984 566799999998632 12 2456677888888665543 346899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHH
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDIL 567 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 567 (1156)
++|||||+.+|+++||||||++||+.++..+.+.+.. . .|.|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999998876643 2 489999999999998779999999999999999999886
Q ss_pred hc
Q 037346 568 NS 569 (1156)
Q Consensus 568 ~~ 569 (1156)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 53
No 214
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-37 Score=338.97 Aligned_cols=204 Identities=22% Similarity=0.348 Sum_probs=170.6
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC--C---CCcEEEEcCe--------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP--K---ESGIIRLCGT-------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~--~---~~G~i~~~g~-------- 422 (1156)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.
T Consensus 11 ~~l~i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~ 87 (259)
T PRK14274 11 EVYQINGMNLWYG---QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVD 87 (259)
T ss_pred ceEEEeeEEEEEC---CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccC
Confidence 3589999999996 3479999999999999999999999999999999999987 3 5899998762
Q ss_pred -------EEEEecCCcCCCccHHHHhhcCCC----CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 423 -------KAYVAQSPWIQSGKIEENILFGKE----MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 423 -------~~~v~Q~~~~~~~ti~eni~~~~~----~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
++|++|++.++..|++||+.++.. .++ ++..++++..++.+.+. ......+.+|||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq 160 (259)
T PRK14274 88 LVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQ 160 (259)
T ss_pred HHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHH
Confidence 689999999988899999987532 121 23344566666643321 22345678999999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||++||||++.+|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 161 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 240 (259)
T PRK14274 161 QQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNK 240 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999988776544 34789999999999876 599999999999999999998
Q ss_pred HHhc
Q 037346 566 ILNS 569 (1156)
Q Consensus 566 l~~~ 569 (1156)
+...
T Consensus 241 ~~~~ 244 (259)
T PRK14274 241 MFSN 244 (259)
T ss_pred HhhC
Confidence 8643
No 215
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4e-37 Score=353.10 Aligned_cols=187 Identities=30% Similarity=0.421 Sum_probs=162.7
Q ss_pred CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------------------eEEEEecCC
Q 037346 372 PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG---------------------TKAYVAQSP 430 (1156)
Q Consensus 372 ~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g---------------------~~~~v~Q~~ 430 (1156)
...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| +++|++|++
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 35689999999999999999999999999999999999999999999987 279999999
Q ss_pred cCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 431 WIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 431 ~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
.+++ .|++||+.++.. .+ .++..++++..+|.+..+ ....+||||||||++|||||+.+|+
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~-----------~~~~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWAD-----------KKPGELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9887 699999998642 12 234566777777765443 3346899999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|+|||||||+||+.++..+.+.+.. ..++|+|+|||+++.+ +.||+|++|++|++++.|+++++...
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999999999887644 2489999999999987 56999999999999999999998754
No 216
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.8e-37 Score=336.71 Aligned_cols=198 Identities=25% Similarity=0.372 Sum_probs=169.0
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFD---GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 378999999996 347999999999999999999999999999999999999999999999872
Q ss_pred EEEEecCCcCCCc-cHHHHhhcCCCC---------------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 423 KAYVAQSPWIQSG-KIEENILFGKEM---------------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~-ti~eni~~~~~~---------------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
++|++|++.++.+ |++||+.++... ++++.++.++..++.+. ......+||||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G 147 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADE-----------ADRLAGLLSHG 147 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHH
Confidence 6899999988875 999999875321 12234455555555432 33556789999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChH
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYS 564 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 564 (1156)
||||++||||++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 148 e~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~ 227 (242)
T TIGR03411 148 QKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLD 227 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHH
Confidence 99999999999999999999999999999999998876644 34689999999999986 59999999999999999988
Q ss_pred HHHh
Q 037346 565 DILN 568 (1156)
Q Consensus 565 ~l~~ 568 (1156)
++..
T Consensus 228 ~~~~ 231 (242)
T TIGR03411 228 QVQA 231 (242)
T ss_pred HHhc
Confidence 8764
No 217
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-37 Score=341.52 Aligned_cols=202 Identities=26% Similarity=0.392 Sum_probs=172.3
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|++++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 589999999997432346999999999999999999999999999999999999999999999872 6
Q ss_pred EEEecCCc--CCCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 424 AYVAQSPW--IQSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 424 ~~v~Q~~~--~~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+|++|+|. ++..|+.|||.++.. ... ++++++++.+++.+... .....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKT-----------REPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHHHHH
Confidence 99999984 667899999987521 222 34566777777754433 34568999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|||+.+|+++||||||++||+.+++.+.+.+.. . .|.|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999998876543 2 38999999999999878999999999999999999888653
No 218
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-37 Score=344.35 Aligned_cols=203 Identities=25% Similarity=0.377 Sum_probs=167.8
Q ss_pred ccEEEeeeEEEeCCCC--CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------
Q 037346 356 TAIEIIDGSFSWDFSS--PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------ 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------ 421 (1156)
+.|+++|++++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4589999999996321 13599999999999999999999999999999999999999999999876
Q ss_pred ------eEEEEecCCc--CCCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 422 ------TKAYVAQSPW--IQSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 422 ------~~~~v~Q~~~--~~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
.++|++|+|. ++..|++||+.|+.. ... ++..++++.+++... ..++.+.+||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~----------~~~~~~~~LS~G 154 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPED----------YVKRSPFELSGG 154 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhcCChhhCCHH
Confidence 2689999984 567799999987632 222 223345555555221 123556789999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccC
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGK 562 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~ 562 (1156)
||||++|||||+.+|++|||||||++||+.+++.+.+.+.. ..|+|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 155 q~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (289)
T PRK13645 155 QKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGS 234 (289)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999988776543 24889999999999875 599999999999999999
Q ss_pred hHHHHh
Q 037346 563 YSDILN 568 (1156)
Q Consensus 563 ~~~l~~ 568 (1156)
++++.+
T Consensus 235 ~~~~~~ 240 (289)
T PRK13645 235 PFEIFS 240 (289)
T ss_pred HHHHhc
Confidence 888764
No 219
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-37 Score=338.55 Aligned_cols=198 Identities=24% Similarity=0.409 Sum_probs=170.0
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 2 TLRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhhe
Confidence 378999999996 357999999999999999999999999999999999999999999999873 7
Q ss_pred EEEecCCcCCCc-cHHHHhhcCCC-----C------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 424 AYVAQSPWIQSG-KIEENILFGKE-----M------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 424 ~~v~Q~~~~~~~-ti~eni~~~~~-----~------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
+|++|++.++.+ |+.||+.++.. + +.++.+++++.+++.+..+ ..+..||||||||+
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv 147 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLAD-----------RRLTDLSGGQRQRA 147 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHc-----------CCcccCCHHHHHHH
Confidence 999999987765 99999988631 1 1234556666667654333 44578999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
+||||++.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+. .||++++|++|+++..|+++++..
T Consensus 148 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 148 FLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999988876643 35889999999999876 599999999999999999888764
No 220
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=8.6e-37 Score=347.45 Aligned_cols=205 Identities=24% Similarity=0.412 Sum_probs=171.6
Q ss_pred ccEEEeeeEEEeCCCC----------CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---
Q 037346 356 TAIEIIDGSFSWDFSS----------PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~----------~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--- 422 (1156)
..++++|++++|+... ...+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 4699999999996321 246899999999999999999999999999999999999999999999873
Q ss_pred -------------EEEEecCCc--CC-CccHHHHhhcCC-----CCCH----HHHHHHHHHhCCchhhhhCCCCCccccc
Q 037346 423 -------------KAYVAQSPW--IQ-SGKIEENILFGK-----EMDR----ERYERVLEACSLKKDLEVLPFGDQTIIG 477 (1156)
Q Consensus 423 -------------~~~v~Q~~~--~~-~~ti~eni~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~ 477 (1156)
++||+|+|. ++ ..||.|||.++. ..+. ++..++++.+++.++. ..
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~----------~~ 156 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNL----------IN 156 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHH----------hc
Confidence 699999983 54 579999997531 1232 3345567777774321 23
Q ss_pred cCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEe
Q 037346 478 ERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIK 553 (1156)
Q Consensus 478 ~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~ 553 (1156)
..+.+|||||||||+|||||+.+|+++|+||||++||+.++.++.+.+.. ..|.|+|+||||++.+.. ||+|++|+
T Consensus 157 ~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~ 236 (331)
T PRK15079 157 RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMY 236 (331)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 45578999999999999999999999999999999999999998876643 248899999999999874 99999999
Q ss_pred CCeEEEccChHHHHhcC
Q 037346 554 DGKITQAGKYSDILNSG 570 (1156)
Q Consensus 554 ~G~i~~~g~~~~l~~~~ 570 (1156)
+|+|++.|+.+++....
T Consensus 237 ~G~ive~g~~~~i~~~~ 253 (331)
T PRK15079 237 LGHAVELGTYDEVYHNP 253 (331)
T ss_pred CCEEEEEcCHHHHHcCC
Confidence 99999999999987643
No 221
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-37 Score=314.40 Aligned_cols=206 Identities=28% Similarity=0.410 Sum_probs=171.1
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.++++|++..|. +..+|+++||++++||+++|+|+||+||||||++|+|..++.+|+|.++|+
T Consensus 3 mL~v~~l~~~YG---~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYG---KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeeccc---ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 578999999996 468999999999999999999999999999999999999999999999994
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCCCCHH-HHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKEMDRE-RYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
++||||...+|. .||+||+..|...... +..+. .++.-.+.+|. .....+.++.+|||||+|-+||||||+++
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 699999999886 4999999987432211 11110 01122233331 22234577889999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
|++|+||||+.+|-|...++|++.+.. ..|.||++|.++.... +.+||.++|++|+|+.+|+.+++.++.
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 999999999999999999999987654 2367999999999885 569999999999999999999998653
No 222
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=7.8e-37 Score=331.76 Aligned_cols=196 Identities=23% Similarity=0.360 Sum_probs=166.1
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (225)
T PRK10247 6 PLLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQ 82 (225)
T ss_pred ceEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhc
Confidence 3699999999996 357999999999999999999999999999999999999999999999873
Q ss_pred EEEEecCCcCCCccHHHHhhcCCC-----CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 423 KAYVAQSPWIQSGKIEENILFGKE-----MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~ti~eni~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
++|++|++.+++.|++||+.++.. .++++..+.++.+++.+. .....+.+||||||||++|||||
T Consensus 83 i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS~G~~qrv~laral 152 (225)
T PRK10247 83 VSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDT----------ILTKNIAELSGGEKQRISLIRNL 152 (225)
T ss_pred cEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChH----------HhcCCcccCCHHHHHHHHHHHHH
Confidence 689999999998899999986421 123445566666666421 22455679999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEe-CCeEEEccChH
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIK-DGKITQAGKYS 564 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~-~G~i~~~g~~~ 564 (1156)
+++|+++||||||++||+.+.+.+.+.+.. ..|+|+|++||+++.++.||++++|+ ++..+++|+|+
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 153 QFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999988776543 24789999999999988899999995 66667778774
No 223
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.4e-37 Score=338.62 Aligned_cols=198 Identities=28% Similarity=0.398 Sum_probs=168.1
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------- 421 (1156)
.++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFH---GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEEC---CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 488999999996 34799999999999999999999999999999999999999999998875
Q ss_pred ------eEEEEecCCcCCC-ccHHHHhhcCC----CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 422 ------TKAYVAQSPWIQS-GKIEENILFGK----EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~-~ti~eni~~~~----~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
.++|++|++.++. .|++||+.++. ..+ .++..++++..++.... ...+.+||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G 148 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKE-----------TSYPRRLSGG 148 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----------hCChhhCChH
Confidence 2689999998875 69999997642 122 12344556666654322 3456799999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccCh
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKY 563 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~ 563 (1156)
||||++||||++.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~ 228 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPA 228 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999988876543 35889999999999886 4999999999999999999
Q ss_pred HHHHh
Q 037346 564 SDILN 568 (1156)
Q Consensus 564 ~~l~~ 568 (1156)
+++.+
T Consensus 229 ~~~~~ 233 (250)
T PRK11264 229 KALFA 233 (250)
T ss_pred HHHhc
Confidence 88764
No 224
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.4e-37 Score=328.67 Aligned_cols=188 Identities=29% Similarity=0.431 Sum_probs=160.9
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAYV 426 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~v 426 (1156)
|+++|++++|+. .. .|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 75 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSML 75 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEE
Confidence 468999999962 22 3999999999999999999999999999999999999999999883 7999
Q ss_pred ecCCcCCCc-cHHHHhhcCCC-------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 427 AQSPWIQSG-KIEENILFGKE-------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 427 ~Q~~~~~~~-ti~eni~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
+|+|.++.. |++||+.++.. .++++..++++.+++.+..... ..+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ia~al~ 144 (211)
T cd03298 76 FQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRL-----------PGELSGGERQRVALARVLV 144 (211)
T ss_pred ecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHHHHHHHh
Confidence 999998865 99999987632 1234566778888876555433 3589999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEcc
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAG 561 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g 561 (1156)
.+|+++||||||++||+.+++.+.+.+.. ..++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 145 RDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999998876643 248899999999999865 9999999999998654
No 225
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-37 Score=338.12 Aligned_cols=203 Identities=27% Similarity=0.384 Sum_probs=170.9
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCC---CCC--CCcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGG---VPK--ESGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~---~~~--~~G~i~~~g---------- 421 (1156)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYG---DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEEC---CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 589999999996 35699999999999999999999999999999999996 454 589999886
Q ss_pred -----eEEEEecCCcCCCccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 -----TKAYVAQSPWIQSGKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|+||+|.++..|++||+.++.. .. +++.+++++.+++.+.+. +...+.+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 2699999999888899999987531 11 234556677777754332 223456789999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999998876644 35789999999999875 5999999999999999999988
Q ss_pred Hhc
Q 037346 567 LNS 569 (1156)
Q Consensus 567 ~~~ 569 (1156)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14245 233 FTN 235 (250)
T ss_pred hcC
Confidence 653
No 226
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-37 Score=340.39 Aligned_cols=204 Identities=25% Similarity=0.320 Sum_probs=170.0
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g--------- 421 (1156)
..++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 20 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 20 HILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred ceEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 4699999999996 3579999999999999999999999999999999999864 6899999876
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCCC----C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKEM----D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~~----~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
.++|++|++.+++.|++||+.++... . +++..+.++.+++...+. ...+..+.+|||||
T Consensus 97 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 169 (268)
T PRK14248 97 VVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQ 169 (268)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHH
Confidence 26899999999888999999875211 1 123444555555542221 22356678999999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||++|||||+.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 170 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 249 (268)
T PRK14248 170 QQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQ 249 (268)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999988776644 34689999999999875 599999999999999999988
Q ss_pred HHhc
Q 037346 566 ILNS 569 (1156)
Q Consensus 566 l~~~ 569 (1156)
+...
T Consensus 250 ~~~~ 253 (268)
T PRK14248 250 IFTS 253 (268)
T ss_pred HHhC
Confidence 7653
No 227
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=338.77 Aligned_cols=203 Identities=27% Similarity=0.349 Sum_probs=173.2
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g--------- 421 (1156)
..++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 19 ~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 4699999999995 3579999999999999999999999999999999999996 5799999887
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
.++|++|++.++..|++||+.++.. .+ +++..++++.+++.+.+. +..++.+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 2699999999988999999987531 11 234556677777754332 23456778999999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||++||||++.+|+++||||||++||+.+.+.+.+.+.. .++.|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999988876644 34689999999999875 599999999999999999988
Q ss_pred HHh
Q 037346 566 ILN 568 (1156)
Q Consensus 566 l~~ 568 (1156)
+..
T Consensus 249 ~~~ 251 (267)
T PRK14237 249 IFT 251 (267)
T ss_pred Hhc
Confidence 864
No 228
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-37 Score=339.67 Aligned_cols=199 Identities=26% Similarity=0.341 Sum_probs=170.3
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 10 ~~l~i~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 86 (265)
T PRK10575 10 TTFALRNVSFRVP---GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARK 86 (265)
T ss_pred ceEEEeeEEEEEC---CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhh
Confidence 4699999999996 347999999999999999999999999999999999999999999999882
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCC--------C---CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKE--------M---DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~--------~---~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
++|++|++.++. .|+.||+.++.. . .+++..++++.+++.+.+.. ...+||||||||
T Consensus 87 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qr 155 (265)
T PRK10575 87 VAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHR-----------LVDSLSGGERQR 155 (265)
T ss_pred eEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCCHHHHHH
Confidence 799999986654 599999987531 1 12345667777777654433 345899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
++||||++.+|+++||||||++||+.+++.+.+.+.. ..|.|+|++||+++.+. .||+|++|++|++++.|+.+++
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 235 (265)
T PRK10575 156 AWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEL 235 (265)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHh
Confidence 9999999999999999999999999999988776643 23789999999999985 5999999999999999998887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
..
T Consensus 236 ~~ 237 (265)
T PRK10575 236 MR 237 (265)
T ss_pred cC
Confidence 64
No 229
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=334.99 Aligned_cols=197 Identities=25% Similarity=0.362 Sum_probs=166.7
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYG---AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEEC---CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 378999999996 357999999999999999999999999999999999999999999999763
Q ss_pred -----EEEEecCCcCCC-ccHHHHhhcCC----CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 423 -----KAYVAQSPWIQS-GKIEENILFGK----EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 -----~~~v~Q~~~~~~-~ti~eni~~~~----~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
++|++|+|.++. .|++||+.++. ... .++..+.++..++...+ .....+||||||
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~ 147 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYA-----------DRFPLHLSGGQQ 147 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHH
Confidence 689999998876 49999997421 111 23345556666665433 344568999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
||++||||++.+|+++||||||++||+.+...+.+.+.. .+|+|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 227 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999988876543 35899999999999986 599999999999999999887
Q ss_pred HH
Q 037346 566 IL 567 (1156)
Q Consensus 566 l~ 567 (1156)
+.
T Consensus 228 ~~ 229 (242)
T PRK11124 228 FT 229 (242)
T ss_pred hc
Confidence 64
No 230
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=338.46 Aligned_cols=203 Identities=25% Similarity=0.356 Sum_probs=170.8
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g--------- 421 (1156)
..++++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 12 ~~l~i~nl~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYG---TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEEC---CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 4699999999996 3569999999999999999999999999999999999987 5899999886
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCCC---C---HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKEM---D---RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~~---~---~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
.++|++|++.++..|++||+.++... . +++..++++.+++...+. ........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHHHH
Confidence 27899999998888999999986421 1 234455666666543221 2335567899999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeC-----------Ce
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKD-----------GK 556 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~-----------G~ 556 (1156)
|++|||||+.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 99999999999999999999999999999998876644 34689999999999875 5999999996 67
Q ss_pred EEEccChHHHHh
Q 037346 557 ITQAGKYSDILN 568 (1156)
Q Consensus 557 i~~~g~~~~l~~ 568 (1156)
+++.|+.+++.+
T Consensus 242 ~~~~~~~~~~~~ 253 (269)
T PRK14259 242 LVEFNETKKIFN 253 (269)
T ss_pred EEEeCCHHHHHh
Confidence 899999988865
No 231
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-37 Score=338.18 Aligned_cols=198 Identities=23% Similarity=0.338 Sum_probs=167.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.++++|+++.|+ +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 589999999996 357999999999999999999999999999999999999999999999883
Q ss_pred EEEEecCCcCCCc-cHHHHhhcCCC----------------CC------HHHHHHHHHHhCCchhhhhCCCCCccccccC
Q 037346 423 KAYVAQSPWIQSG-KIEENILFGKE----------------MD------RERYERVLEACSLKKDLEVLPFGDQTIIGER 479 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~-ti~eni~~~~~----------------~~------~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~ 479 (1156)
++|++|+|.++.. |++||+.++.. .. .++..+.++.+++.+ ..+.+
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~ 150 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLE-----------HANRQ 150 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhh-----------hhhCC
Confidence 5789999998875 99999997521 00 112333444444432 33456
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCC
Q 037346 480 GINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDG 555 (1156)
Q Consensus 480 g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G 555 (1156)
+.+||||||||++||||++.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||++++|++|
T Consensus 151 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 151 AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 679999999999999999999999999999999999999988876643 2 3789999999999985 59999999999
Q ss_pred eEEEccChHHHHh
Q 037346 556 KITQAGKYSDILN 568 (1156)
Q Consensus 556 ~i~~~g~~~~l~~ 568 (1156)
++++.|+.+++..
T Consensus 231 ~i~~~~~~~~~~~ 243 (255)
T PRK11300 231 TPLANGTPEEIRN 243 (255)
T ss_pred eEEecCCHHHHhh
Confidence 9999999888754
No 232
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.4e-37 Score=331.71 Aligned_cols=186 Identities=24% Similarity=0.400 Sum_probs=159.3
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------- 422 (1156)
++++|+++.|+. +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 689999999952 357999999999999999999999999999999999999999999998872
Q ss_pred -EEEEecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 -KAYVAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 -~~~v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|+|.++. .|++||+.++.. .+ +++.++.++..++.+.+.. ...+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADA-----------FPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHHH
Confidence 689999998875 699999987521 11 3455667777777654433 336899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCe
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGK 556 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~ 556 (1156)
||||+.+|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+.. ||++++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999999998876644 358999999999998874 99999999985
No 233
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=7.9e-37 Score=345.53 Aligned_cols=197 Identities=24% Similarity=0.423 Sum_probs=170.9
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------eEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------TKAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------~~~~ 425 (1156)
++++|++++|+ +..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 3 l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEE
Confidence 78999999996 35699999999999999999999999999999999999999999999988 3799
Q ss_pred EecCCcCCCc-cHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhh
Q 037346 426 VAQSPWIQSG-KIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPL 497 (1156)
Q Consensus 426 v~Q~~~~~~~-ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral 497 (1156)
+||+|.++.. |++||+.+... .. .++.+++++.+++.+.. ..+..+||||||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQ-----------HKKIGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHh-----------cCchhhCCHHHHHHHHHHHHH
Confidence 9999998865 99999975321 12 24556677777775443 345578999999999999999
Q ss_pred ccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHh
Q 037346 498 YQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 498 ~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
+++|+++||||||++||+.+++++++.+.. .+++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 999999999999999999999998886644 347999999999998864 99999999999999999998864
No 234
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-37 Score=338.37 Aligned_cols=203 Identities=23% Similarity=0.352 Sum_probs=170.7
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcCe--------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCGT-------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g~-------- 422 (1156)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 11 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 4699999999996 35799999999999999999999999999999999999985 7999998762
Q ss_pred -------EEEEecCCcCCCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 423 -------KAYVAQSPWIQSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 -------~~~v~Q~~~~~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
++|++|++.++..|++||+.++.. .+. ++.+++++.+++...+. ......+.+||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 160 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSGGQQ 160 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCHHHH
Confidence 689999999888999999987531 222 23455666666643221 123456678999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++|||||+.+|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999988776644 34789999999999875 5999999999999999999888
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
.+
T Consensus 241 ~~ 242 (258)
T PRK14268 241 FH 242 (258)
T ss_pred hc
Confidence 64
No 235
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=340.39 Aligned_cols=197 Identities=24% Similarity=0.359 Sum_probs=167.6
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------- 422 (1156)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQ---DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcC---CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 78999999996 357999999999999999999999999999999999999999999999772
Q ss_pred EEEEecCCc--CCCccHHHHhhcCC---CCCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 KAYVAQSPW--IQSGKIEENILFGK---EMDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 ~~~v~Q~~~--~~~~ti~eni~~~~---~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|+|. ++..|+.+|+.++. ..+. ++..++++.+++.+.. .....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHHH
Confidence 689999985 46678999998742 1222 2345566666765433 23457899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
||||+.+|+++||||||++||+.++..+.+.+.. .+|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999988876644 35889999999999985 599999999999999999988764
No 236
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.3e-36 Score=331.41 Aligned_cols=193 Identities=26% Similarity=0.370 Sum_probs=163.7
Q ss_pred cEEEeeeEEEeCCCCC-CCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------
Q 037346 357 AIEIIDGSFSWDFSSP-NPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~-~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------- 421 (1156)
.++++|++++|+.... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999964211 3599999999999999999999999999999999999999999999876
Q ss_pred ---eEEEEecCCcCCC-ccHHHHhhcCC---CC----CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 422 ---TKAYVAQSPWIQS-GKIEENILFGK---EM----DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 422 ---~~~~v~Q~~~~~~-~ti~eni~~~~---~~----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
.++|++|+|.++. .|++||+.++. .. ..++..++++.+++.+.++. ...+||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDH-----------LPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------ChhhCCHHHHHH
Confidence 2789999998876 49999998642 11 13455667777777654443 346899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEeCCeEEEc
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIKDGKITQA 560 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~ 560 (1156)
++|||||+.+|+++||||||++||+.+.+.+.+.+.. ..|+|+|++||+++.+..||++++|++|++++.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999988876643 237899999999998877999999999999753
No 237
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=337.08 Aligned_cols=203 Identities=25% Similarity=0.349 Sum_probs=169.4
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC--C---CCcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP--K---ESGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~--~---~~G~i~~~g---------- 421 (1156)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+ | ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYN---KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 589999999996 3479999999999999999999999999999999999853 6 489999886
Q ss_pred -----eEEEEecCCcCCCccHHHHhhcCCC---C-C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 -----TKAYVAQSPWIQSGKIEENILFGKE---M-D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~ti~eni~~~~~---~-~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|++|++.+++.|++||+.++.. . . +++..++++.+++...+. +..++.+.+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 2789999999988999999986521 1 1 123344566666543221 223566789999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999998876644 34689999999999875 5999999999999999999888
Q ss_pred Hhc
Q 037346 567 LNS 569 (1156)
Q Consensus 567 ~~~ 569 (1156)
.+.
T Consensus 235 ~~~ 237 (252)
T PRK14239 235 FMN 237 (252)
T ss_pred HhC
Confidence 653
No 238
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=334.40 Aligned_cols=198 Identities=22% Similarity=0.391 Sum_probs=167.6
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------e
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------T 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------~ 422 (1156)
.++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 488999999996 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|++.++. .|++||+.+... .+ ..+..+.++..++.. .......+||||||||++|
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~l 148 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEH-----------LRDSMGQSLSGGERRRVEI 148 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHH-----------HhhcchhhCCHHHHHHHHH
Confidence 789999998876 599999987532 11 123445555555532 2345567899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||++.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 149 ARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 9999999999999999999999999888765533 35899999999998775 599999999999999999988764
No 239
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.7e-37 Score=330.95 Aligned_cols=187 Identities=28% Similarity=0.410 Sum_probs=159.3
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------- 422 (1156)
++++|+++.|+. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPN--GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 468999999963 247999999999999999999999999999999999999999999999873
Q ss_pred -EEEEecCCcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 -KAYVAQSPWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 -~~~v~Q~~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|+|.++. .|++||+.++.. .. +++..+.++.+++.+..+ ....+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHR-----------ALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhcCHHHHHHHHH
Confidence 699999998877 599999987531 11 234566777777765443 3346899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeE
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKI 557 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i 557 (1156)
|||++.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+.. ||++++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999988876644 358999999999999874 999999999974
No 240
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=337.51 Aligned_cols=202 Identities=25% Similarity=0.371 Sum_probs=170.7
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..++++|+++.|+.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (269)
T PRK13648 6 SIIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKH 84 (269)
T ss_pred ceEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 358999999999632 246999999999999999999999999999999999999999999999883
Q ss_pred EEEEecCCc--CCCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 KAYVAQSPW--IQSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 ~~~v~Q~~~--~~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|+|. ++..|+++|+.++.. ... ++.+++++.+++.+..+ ..+.+||||||||++|
T Consensus 85 i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~l 153 (269)
T PRK13648 85 IGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-----------YEPNALSGGQKQRVAI 153 (269)
T ss_pred eeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHH
Confidence 689999995 455689999988632 121 23455666666654332 3457899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|||++.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 154 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 154 AGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999988876643 2 37899999999998877999999999999999999887653
No 241
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=333.14 Aligned_cols=198 Identities=24% Similarity=0.321 Sum_probs=165.7
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 589999999996 357999999999999999999999999999999999999999999999872
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCCC-CH----HHHHHHHHHh-CCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKEM-DR----ERYERVLEAC-SLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIAR 495 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~~-~~----~~~~~~~~~~-~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAr 495 (1156)
++|++|++.++. .|++||+.++... .. ++..++++.. ++.+. ......+||||||||++|||
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~ 150 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHER-----------RIQRAGTMSGGEQQMLAIGR 150 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHHH-----------HhCchhhCCHHHHHHHHHHH
Confidence 689999998887 4999999876421 11 1223333333 12211 12456789999999999999
Q ss_pred hhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 496 PLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 496 al~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|++.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 151 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 151 ALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred HHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999988876643 45899999999998765 599999999999999999988864
No 242
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=335.31 Aligned_cols=202 Identities=26% Similarity=0.371 Sum_probs=169.8
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC-----CcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE-----SGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~-----~G~i~~~g---------- 421 (1156)
.++++|++|.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYH---KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEEC---CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 589999999996 356999999999999999999999999999999999999987 59998876
Q ss_pred -----eEEEEecCCcCCCccHHHHhhcCCCC----C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 -----TKAYVAQSPWIQSGKIEENILFGKEM----D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~ti~eni~~~~~~----~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|++|+|.+++.|++||+.++... . +++.+++++..++.+.+. ...++.+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 27899999999888999999886321 1 123344455555543222 234567789999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.++.++.+.+.. .+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 999999999999999999999999999999988776543 357899999999999865 899999999999999999887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
..
T Consensus 234 ~~ 235 (251)
T PRK14249 234 FS 235 (251)
T ss_pred Hh
Confidence 64
No 243
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.4e-37 Score=333.27 Aligned_cols=196 Identities=28% Similarity=0.458 Sum_probs=165.1
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------eE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------TK 423 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------~~ 423 (1156)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYG---QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeC---CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 46899999996 34799999999999999999999999999999999999999999999987 26
Q ss_pred EEEecCCcCCCc-cHHHHhhcCCCC---C-HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 424 AYVAQSPWIQSG-KIEENILFGKEM---D-RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 424 ~~v~Q~~~~~~~-ti~eni~~~~~~---~-~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
+|++|++.++.. |++||+.++... . .+...++++.+++. .....+...+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~l----------~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVL----------KEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHhH----------HHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 899999988875 999999875321 1 22334455444311 11224556789999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
.+|+++||||||++||+.+++++.+.+.. . .++|+|++||+++.+. .||+|+++++|++++.|+++++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999998876644 2 3789999999999987 4999999999999999998876
No 244
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=339.55 Aligned_cols=199 Identities=31% Similarity=0.457 Sum_probs=171.1
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|++++|+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 4789999999962 346999999999999999999999999999999999999999999999873 6
Q ss_pred EEEecCCc--CCCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 424 AYVAQSPW--IQSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 424 ~~v~Q~~~--~~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+|++|+|. +++.|+.||+.++.. .+. +++++.++.+++.+.+. ..+..||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qrl~la 149 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRD-----------RVPHHLSGGEKKRVAIA 149 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHHHHHHHHH
Confidence 99999983 667899999987532 332 34566777777765444 33468999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||+.+|+++||||||++||+.+++.+.+.+.. . .|.|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 999999999999999999999999988776643 2 3899999999999985 699999999999999999998865
No 245
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=340.39 Aligned_cols=198 Identities=30% Similarity=0.467 Sum_probs=169.9
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------- 422 (1156)
++++|++++|+. ..++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999962 346999999999999999999999999999999999999999999999872
Q ss_pred EEEEecCC--cCCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 KAYVAQSP--WIQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 ~~~v~Q~~--~~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|+| .++..|+.||+.++.. .. .++..++++.+++.+..+ ..+.+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFEN-----------KPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhc-----------CChhhCCHHHHHHHHH
Confidence 58999997 4677899999987531 11 234556777777754332 3456899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||++.+|+++||||||++||+.++..+.+.+.. .+|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999998876644 34899999999999886 599999999999999999998764
No 246
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.3e-36 Score=317.74 Aligned_cols=165 Identities=34% Similarity=0.555 Sum_probs=150.3
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------EEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------KAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------~~~ 425 (1156)
++++|++++|+.. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEE
Confidence 4689999999632 236999999999999999999999999999999999999999999999984 699
Q ss_pred EecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeee
Q 037346 426 VAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFL 505 (1156)
Q Consensus 426 v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ill 505 (1156)
++|+|++++.|++||+ +.+||||||||++||||++.+|+++|
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999989999998 35799999999999999999999999
Q ss_pred eeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCeEEEcc
Q 037346 506 LDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGKITQAG 561 (1156)
Q Consensus 506 lDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g 561 (1156)
|||||++||+.+++.+++.+.. .+++|+|++||+++.++.||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999988877644 3578999999999998889999999999998754
No 247
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1.3e-36 Score=313.27 Aligned_cols=162 Identities=25% Similarity=0.394 Sum_probs=146.9
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCCCc
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQSG 435 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~~~ 435 (1156)
++++|++++|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.+++.
T Consensus 1 i~~~~~~~~~~~--~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (166)
T cd03223 1 IELENLSLATPD--GRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYLPLG 78 (166)
T ss_pred CEEEEEEEEcCC--CCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCccccc
Confidence 468999999963 35799999999999999999999999999999999999999999999987 79999999998888
Q ss_pred cHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCH
Q 037346 436 KIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDD 515 (1156)
Q Consensus 436 ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~ 515 (1156)
|++||+.++ .+.+||||||||++||||++++|+++||||||++||+
T Consensus 79 tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~ 124 (166)
T cd03223 79 TLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDE 124 (166)
T ss_pred cHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCH
Confidence 999999764 1358999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEEccCCCccccCCEEEEEeCCe
Q 037346 516 HTGAHLFKFCWVSSSKTVIYATHQVEFLPAADLILVIKDGK 556 (1156)
Q Consensus 516 ~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~~d~i~~l~~G~ 556 (1156)
.+++.+.+.+... ++|+|++||+++....||++++|++|.
T Consensus 125 ~~~~~l~~~l~~~-~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 125 ESEDRLYQLLKEL-GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred HHHHHHHHHHHHh-CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 9999888766444 689999999998777899999998763
No 248
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=335.06 Aligned_cols=202 Identities=25% Similarity=0.369 Sum_probs=169.2
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g---------- 421 (1156)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYG---DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEEC---CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 589999999996 34799999999999999999999999999999999998763 689999986
Q ss_pred -----eEEEEecCCcCCCccHHHHhhcCCC---C-C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 -----TKAYVAQSPWIQSGKIEENILFGKE---M-D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~ti~eni~~~~~---~-~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|++|+|.+++.|++||+.++.. . . +++..++++.+++.+.+. ...++.+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHHH
Confidence 2689999999888999999987632 1 1 233445566666543332 123456789999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999988776544 34789999999999876 5999999999999999998887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
..
T Consensus 233 ~~ 234 (250)
T PRK14240 233 FT 234 (250)
T ss_pred Hh
Confidence 64
No 249
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=336.82 Aligned_cols=203 Identities=26% Similarity=0.362 Sum_probs=170.2
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcCe---------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCGT--------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g~--------- 422 (1156)
.++++|++|+|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYG---NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 589999999996 3579999999999999999999999999999999999997 47999998873
Q ss_pred ------EEEEecCCcCCCccHHHHhhcCCC---C-C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 423 ------KAYVAQSPWIQSGKIEENILFGKE---M-D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 ------~~~v~Q~~~~~~~ti~eni~~~~~---~-~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
++|++|++.++..|++||+.++.. . + +++..++++.+++.... ....+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 689999999988999999987532 1 1 13445566666664211 1122456689999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++++|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999988776644 34689999999999876 4999999999999999999887
Q ss_pred Hhc
Q 037346 567 LNS 569 (1156)
Q Consensus 567 ~~~ 569 (1156)
...
T Consensus 234 ~~~ 236 (251)
T PRK14251 234 FIA 236 (251)
T ss_pred HhC
Confidence 643
No 250
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=335.45 Aligned_cols=198 Identities=27% Similarity=0.398 Sum_probs=169.4
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~ 423 (1156)
.++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLG---GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 378999999996 357999999999999999999999999999999999999999999999883 6
Q ss_pred EEEecCCcC-CCccHHHHhhcCCC-C------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHH
Q 037346 424 AYVAQSPWI-QSGKIEENILFGKE-M------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIAR 495 (1156)
Q Consensus 424 ~~v~Q~~~~-~~~ti~eni~~~~~-~------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAr 495 (1156)
+|++|++.+ +..|++||+.++.. . .+++.+++++.+++.+..+ ....+||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAG-----------RDYPQLSGGEQQRVQLAR 147 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHH
Confidence 899999987 56799999987532 1 1234556677777754332 345789999999999999
Q ss_pred hhc------cCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 496 PLY------QDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 496 al~------~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
||+ .+|+++||||||++||+.+++.+.+.+.. ..|+|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAE 227 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHH
Confidence 999 59999999999999999999988776543 35789999999999886 599999999999999999888
Q ss_pred HHh
Q 037346 566 ILN 568 (1156)
Q Consensus 566 l~~ 568 (1156)
+..
T Consensus 228 ~~~ 230 (258)
T PRK13548 228 VLT 230 (258)
T ss_pred HhC
Confidence 764
No 251
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=335.06 Aligned_cols=202 Identities=27% Similarity=0.355 Sum_probs=169.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcCe---------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCGT--------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g~--------- 422 (1156)
.++++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFG---QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEEC---CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 488999999996 35799999999999999999999999999999999999974 6999999873
Q ss_pred ----EEEEecCCcCC-CccHHHHhhcCCCC-----C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 423 ----KAYVAQSPWIQ-SGKIEENILFGKEM-----D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 ----~~~v~Q~~~~~-~~ti~eni~~~~~~-----~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
++|++|+|.++ ..|++||+.++... . .++..++++.+++.+.+. ........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCHHHH
Confidence 68999999754 67999999875321 1 234456677777643221 122455678999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.+++++.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999998877654 34789999999999875 5999999999999999999887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
..
T Consensus 233 ~~ 234 (250)
T PRK14247 233 FT 234 (250)
T ss_pred Hc
Confidence 64
No 252
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.3e-36 Score=336.36 Aligned_cols=198 Identities=27% Similarity=0.373 Sum_probs=168.3
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC----------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG---------------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g---------------- 421 (1156)
|+++|+++.|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFG---ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeC---CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 47899999996 35799999999999999999999999999999999999999999999876
Q ss_pred ----------eEEEEecCCcCCC-ccHHHHhhcCC----CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCC
Q 037346 422 ----------TKAYVAQSPWIQS-GKIEENILFGK----EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGIN 482 (1156)
Q Consensus 422 ----------~~~~v~Q~~~~~~-~ti~eni~~~~----~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~ 482 (1156)
.++|++|++.++. .|+.||+.++. ... .+++.+.++.+++.+.+ .+.+.+
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKA-----------DHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHh-----------hcChhh
Confidence 2689999998775 79999998742 111 23455566666665443 344578
Q ss_pred CCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEE
Q 037346 483 LSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKIT 558 (1156)
Q Consensus 483 LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~ 558 (1156)
||||||||++||||++.+|+++||||||++||+.++..+.+.+.. . .|+|+|++||+++.+. .||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999988876643 2 3889999999999885 59999999999999
Q ss_pred EccChHHHHhc
Q 037346 559 QAGKYSDILNS 569 (1156)
Q Consensus 559 ~~g~~~~l~~~ 569 (1156)
+.|+++++...
T Consensus 227 ~~g~~~~~~~~ 237 (252)
T TIGR03005 227 EQGKPDEIFRQ 237 (252)
T ss_pred EeCCHHHHhcC
Confidence 99999887643
No 253
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2e-36 Score=336.87 Aligned_cols=207 Identities=23% Similarity=0.336 Sum_probs=170.5
Q ss_pred cEEEeeeEEEeCCC------CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------
Q 037346 357 AIEIIDGSFSWDFS------SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~------~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------- 421 (1156)
.++++|++|.|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999631 135799999999999999999999999999999999999999999999987
Q ss_pred -------eEEEEecCCc--CC-CccHHHHhhcCC----CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCC
Q 037346 422 -------TKAYVAQSPW--IQ-SGKIEENILFGK----EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINL 483 (1156)
Q Consensus 422 -------~~~~v~Q~~~--~~-~~ti~eni~~~~----~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~L 483 (1156)
.++|++|+|. ++ ..|++||+.++. ..+ .++..++++.+++... ..+..+.+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----------~~~~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSE----------DADKLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChh----------hhhCChhhC
Confidence 2799999983 33 469999996531 122 2345556666666421 123456789
Q ss_pred CHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEE
Q 037346 484 SGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQ 559 (1156)
Q Consensus 484 SgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~ 559 (1156)
|||||||++||||++.+|+++||||||++||+.+++.+.+.+.. ..|+|+|++||+++.+. .||++++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999888776643 23899999999999986 599999999999999
Q ss_pred ccChHHHHhcCcch
Q 037346 560 AGKYSDILNSGTDF 573 (1156)
Q Consensus 560 ~g~~~~l~~~~~~~ 573 (1156)
.|+++++......+
T Consensus 232 ~g~~~~~~~~~~~~ 245 (265)
T TIGR02769 232 ECDVAQLLSFKHPA 245 (265)
T ss_pred ECCHHHHcCCCCHH
Confidence 99999987643333
No 254
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=337.48 Aligned_cols=199 Identities=23% Similarity=0.294 Sum_probs=170.7
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..++++|++++|+ ++.+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYG---KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEEC---CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 4699999999996 357999999999999999999999999999999999999999999999873
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCC-C-------C---CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGK-E-------M---DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~-~-------~---~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
++|++|++.++. .|++||+.++. . . +.++.+++++.+++.+.. ...+.+||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLA-----------DQSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-----------cCCcccCChHHHHH
Confidence 699999998764 69999998752 1 1 123455667777775433 34567899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
++||||++.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999998876644 2 4789999999999875 5999999999999999999887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 64
No 255
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=335.19 Aligned_cols=203 Identities=24% Similarity=0.349 Sum_probs=171.7
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcCe---------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCGT--------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g~--------- 422 (1156)
.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYG---EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEEC---CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 589999999996 35699999999999999999999999999999999999875 7899999862
Q ss_pred ------EEEEecCCcCCCccHHHHhhcCCCC----C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 423 ------KAYVAQSPWIQSGKIEENILFGKEM----D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 ------~~~v~Q~~~~~~~ti~eni~~~~~~----~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
++|++|++.++..|++||+.|+... . .+++.++++.+++.+.+.. ..+....+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 6999999999889999999875321 1 2344567777776433321 23456779999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.++.++.+.+.. .+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 999999999999999999999999999999998776644 346899999999998764 999999999999999999887
Q ss_pred Hhc
Q 037346 567 LNS 569 (1156)
Q Consensus 567 ~~~ 569 (1156)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 643
No 256
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=328.44 Aligned_cols=196 Identities=30% Similarity=0.455 Sum_probs=168.1
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAYV 426 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~v 426 (1156)
++++|++++|+. .+ .|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 2 l~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 76 (232)
T PRK10771 2 LKLTDITWLYHH---LP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSML 76 (232)
T ss_pred eEEEEEEEEECC---cc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEE
Confidence 689999999962 22 3999999999999999999999999999999999999999999873 6999
Q ss_pred ecCCcCCCc-cHHHHhhcCCC----C---CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 427 AQSPWIQSG-KIEENILFGKE----M---DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 427 ~Q~~~~~~~-ti~eni~~~~~----~---~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
+|++.++.. |++||+.++.. . ++++..++++.+++.+.++.. ...||||||||++||||++
T Consensus 77 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~laral~ 145 (232)
T PRK10771 77 FQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARL-----------PGQLSGGQRQRVALARCLV 145 (232)
T ss_pred ecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCC-----------cccCCHHHHHHHHHHHHHh
Confidence 999988874 99999987531 1 134566677778876555443 3589999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
++|+++||||||++||+.+++.+.+.+.. ..|+|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 146 ~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 146 REQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999988876643 24789999999999986 4999999999999999999888754
No 257
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.9e-37 Score=329.01 Aligned_cols=186 Identities=36% Similarity=0.508 Sum_probs=156.8
Q ss_pred EEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EEE
Q 037346 359 EIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KAY 425 (1156)
Q Consensus 359 ~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~~ 425 (1156)
+++|+++.|+.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999631 257999999999999999999999999999999999999999999999873 689
Q ss_pred EecCCc--CCCccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHh
Q 037346 426 VAQSPW--IQSGKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARP 496 (1156)
Q Consensus 426 v~Q~~~--~~~~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAra 496 (1156)
++|+|. ++..|++||+.++.. .+ .++..+.++..++.+.++ +...+||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRD-----------RSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHHHHHH
Confidence 999983 567899999987521 22 234455666667654443 4457899999999999999
Q ss_pred hccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCe
Q 037346 497 LYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGK 556 (1156)
Q Consensus 497 l~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~ 556 (1156)
|+.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999887644 347899999999999875 99999999985
No 258
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=334.88 Aligned_cols=192 Identities=28% Similarity=0.444 Sum_probs=164.3
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------EEEEecC
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------KAYVAQS 429 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------~~~v~Q~ 429 (1156)
++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|++|+
T Consensus 2 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~ 78 (255)
T PRK11248 2 LQISHLYADYG---GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQN 78 (255)
T ss_pred EEEEEEEEEeC---CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCC
Confidence 78999999996 357999999999999999999999999999999999999999999999873 6999999
Q ss_pred CcCCC-ccHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCC
Q 037346 430 PWIQS-GKIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDA 501 (1156)
Q Consensus 430 ~~~~~-~ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~ 501 (1156)
+.++. .|++||+.++.. .. .++..++++.+++.+... ..+.+||||||||++|||||+.+|
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qrl~laral~~~p 147 (255)
T PRK11248 79 EGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEK-----------RYIWQLSGGQRQRVGIARALAANP 147 (255)
T ss_pred CccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhh-----------CChhhCCHHHHHHHHHHHHHhcCC
Confidence 98776 599999987521 12 234566777777754333 345789999999999999999999
Q ss_pred CeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEe--CCeEEEccCh
Q 037346 502 DIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIK--DGKITQAGKY 563 (1156)
Q Consensus 502 ~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~--~G~i~~~g~~ 563 (1156)
+++||||||++||+.+.+.+.+.+.. ..|+|+|++||+++.+. .||+|++|+ +|++++.++.
T Consensus 148 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 148 QLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999998876643 24899999999999886 599999998 5999987764
No 259
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-36 Score=337.34 Aligned_cols=204 Identities=27% Similarity=0.403 Sum_probs=171.9
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC--------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG-------- 421 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g-------- 421 (1156)
...++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 23 ~~~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYG---DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEEC---CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 44699999999996 34799999999999999999999999999999999999884 899999876
Q ss_pred -------eEEEEecCCcCCCccHHHHhhcCCC---C-C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 422 -------TKAYVAQSPWIQSGKIEENILFGKE---M-D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 422 -------~~~~v~Q~~~~~~~ti~eni~~~~~---~-~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
.++|++|++.+++.|++||+.++.. . . +++..++++.+++.+++. +..++.+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 2689999999888899999987521 1 1 133455666666654332 2345677899999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChH
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYS 564 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 564 (1156)
||||++||||++.+|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 99999999999999999999999999999999988776644 34689999999999875 59999999999999999998
Q ss_pred HHHh
Q 037346 565 DILN 568 (1156)
Q Consensus 565 ~l~~ 568 (1156)
++..
T Consensus 253 ~~~~ 256 (272)
T PRK14236 253 TLFT 256 (272)
T ss_pred HHhc
Confidence 8764
No 260
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.9e-36 Score=335.68 Aligned_cols=197 Identities=24% Similarity=0.385 Sum_probs=167.9
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~ 424 (1156)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 2 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAG---GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEEC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 67899999996 357999999999999999999999999999999999999999999999882 68
Q ss_pred EEecCCcC-CCccHHHHhhcCCC---------C--CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 425 YVAQSPWI-QSGKIEENILFGKE---------M--DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 425 ~v~Q~~~~-~~~ti~eni~~~~~---------~--~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
|++|++.+ +..|++||+.++.. . +.++..++++.+++.+.. ...+.+||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLA-----------DRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCHHHHHHHH
Confidence 99999854 56799999987531 0 122455566666664333 3455789999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
||||++.+|+++||||||++||+.+...+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999999999988776643 34789999999999985 599999999999999999888754
No 261
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.7e-36 Score=328.82 Aligned_cols=188 Identities=23% Similarity=0.337 Sum_probs=159.5
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------- 422 (1156)
++++|+++.|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999942 357999999999999999999999999999999999999999999999873
Q ss_pred -EEEEecCCcC-CCccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 -KAYVAQSPWI-QSGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 -~~~v~Q~~~~-~~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|+|.+ ++.|++||+.++.. .+. ++.++.++..++.+... ....+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAK-----------NFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCchhCCHHHHHHHHH
Confidence 6899999986 46799999987531 222 23445666666654433 3457899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeEE
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKIT 558 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~ 558 (1156)
|||++.+|+++||||||++||+.+++.+.+.+.. .++.|+|++||+++.+.. ||+|++|++|+++
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 9999999999999999999999999988776543 347899999999999865 9999999999985
No 262
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-36 Score=335.10 Aligned_cols=203 Identities=26% Similarity=0.394 Sum_probs=169.4
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g---------- 421 (1156)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYG---SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeC---CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 589999999996 35799999999999999999999999999999999999987 499999876
Q ss_pred -----eEEEEecCCcCCCc-cHHHHhhcCCC---C--CH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 422 -----TKAYVAQSPWIQSG-KIEENILFGKE---M--DR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~-ti~eni~~~~~---~--~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
.++|++|++.++.. |++||+.++.. . .. ++..++++..++...+. ......+.+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 26899999988865 99999987521 1 11 23445566666543321 1234567899999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChH
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYS 564 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 564 (1156)
||||++||||++.+|+++||||||++||+.+++++.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998876644 34689999999999876 59999999999999999998
Q ss_pred HHHhc
Q 037346 565 DILNS 569 (1156)
Q Consensus 565 ~l~~~ 569 (1156)
++...
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 87643
No 263
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-36 Score=336.63 Aligned_cols=204 Identities=24% Similarity=0.368 Sum_probs=169.4
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g--------- 421 (1156)
..++++|+++.|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 23 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 23 VVFDTQNLNLWYG---EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred eEEEEeeeEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 3699999999996 3469999999999999999999999999999999999987 6999999987
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCC---C-CHH----HHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKE---M-DRE----RYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~---~-~~~----~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
.++|++|+|.++..|++||+.++.. . +++ +..+.++..++.+.+. ...+..+.+|||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-------~~~~~~~~~LSgGe 172 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELK-------DRLHDNAYGLSGGQ 172 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHH-------HHHhcCcccCCHHH
Confidence 2689999999988899999987521 1 111 1233344443322221 23356778999999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||++|||||+.+|+++||||||++||+.+.+++.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|++++
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~ 252 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDK 252 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999998876644 34689999999999976 599999999999999999988
Q ss_pred HHhc
Q 037346 566 ILNS 569 (1156)
Q Consensus 566 l~~~ 569 (1156)
+...
T Consensus 253 ~~~~ 256 (271)
T PRK14238 253 IFSN 256 (271)
T ss_pred HHcC
Confidence 8653
No 264
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.1e-36 Score=344.65 Aligned_cols=186 Identities=24% Similarity=0.371 Sum_probs=161.1
Q ss_pred CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------EEEEecCCcCCCc-cHH
Q 037346 372 PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------KAYVAQSPWIQSG-KIE 438 (1156)
Q Consensus 372 ~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------~~~v~Q~~~~~~~-ti~ 438 (1156)
++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+||++.++.. |++
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHH
Confidence 357999999999999999999999999999999999999999999999882 7999999988765 999
Q ss_pred HHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCC
Q 037346 439 ENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFS 511 (1156)
Q Consensus 439 eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s 511 (1156)
||+.+... .. .++.+++++.+++.+..+ .+..+||||||||++|||||+++|+++||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAAD-----------RPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhC-----------CchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99986421 11 235667778877764432 3457899999999999999999999999999999
Q ss_pred CcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 512 PVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 512 ~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
+||+.+++.+.+.+.. .+|+|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 9999999998876644 35899999999999986 599999999999999999988764
No 265
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-36 Score=335.20 Aligned_cols=204 Identities=25% Similarity=0.372 Sum_probs=171.5
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g--------- 421 (1156)
..++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 9 ~~l~i~~v~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 85 (264)
T PRK14243 9 TVLRTENLNVYYG---SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVD 85 (264)
T ss_pred eEEEEeeeEEEEC---CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccC
Confidence 3689999999996 3479999999999999999999999999999999999976 3799999877
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCCC---C---HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKEM---D---RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~~---~---~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
.++|++|++.+++.|++||+.++... . +++..++++.+++...+.. ..+..+.+|||||||
T Consensus 86 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~q 158 (264)
T PRK14243 86 PVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQ 158 (264)
T ss_pred hHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHH
Confidence 26999999998888999999876421 1 2344556666666543321 234567899999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEe---------CCeEE
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIK---------DGKIT 558 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~---------~G~i~ 558 (1156)
|++|||||+.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||+|++|+ +|+++
T Consensus 159 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~ 238 (264)
T PRK14243 159 RLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLV 238 (264)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 99999999999999999999999999999998876644 34589999999999876 599999998 89999
Q ss_pred EccChHHHHhc
Q 037346 559 QAGKYSDILNS 569 (1156)
Q Consensus 559 ~~g~~~~l~~~ 569 (1156)
+.|+++++.+.
T Consensus 239 ~~~~~~~~~~~ 249 (264)
T PRK14243 239 EFDRTEKIFNS 249 (264)
T ss_pred EeCCHHHHHhC
Confidence 99999998653
No 266
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-37 Score=309.24 Aligned_cols=195 Identities=24% Similarity=0.405 Sum_probs=173.4
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCC-CCChHHHhhcCeeeccccccccc-cch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDIS-LIGLHDLRTRLSIIPQDPTMFEG-TTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~~~~LR~~i~~VpQdp~LF~g-TIr 1025 (1156)
-.+++|+++..+++.+++.||||||||||+++|.||-+|++|+|.|||.++. ..++..+|+++|+|+|+..||.- |+.
T Consensus 16 ~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPHlTvl 95 (240)
T COG1126 16 EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVL 95 (240)
T ss_pred EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcCeecccccccccchHH
Confidence 3577888888888888899999999999999999999999999999998774 34899999999999999999965 999
Q ss_pred hccCCCC----C----CCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHH
Q 037346 1026 SNLDPLE----E----HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQI 1090 (1156)
Q Consensus 1026 ~Nl~~~~----~----~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I 1090 (1156)
+|+.... . .+++.-.+.|+++||.|.....|..|.-+ ||||.-+|+|+++|||||+||||.-..+
T Consensus 96 eNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EV 175 (240)
T COG1126 96 ENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEV 175 (240)
T ss_pred HHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHH
Confidence 9997532 1 22445678899999999999999988755 8999999999999999999999999999
Q ss_pred HHHHHHhc-CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCC
Q 037346 1091 QQTLRQHF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSS 1142 (1156)
Q Consensus 1091 ~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g 1142 (1156)
.+.++++. .|.|+|+|||.+...++ ||||+.||+|+|+|+|+|+++..+++.
T Consensus 176 L~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~ 229 (240)
T COG1126 176 LDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKS 229 (240)
T ss_pred HHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCC
Confidence 99999876 47899999999999886 999999999999999999999988764
No 267
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-36 Score=342.75 Aligned_cols=204 Identities=23% Similarity=0.344 Sum_probs=170.7
Q ss_pred ccEEEeeeEEEeCCCC-------CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------
Q 037346 356 TAIEIIDGSFSWDFSS-------PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~-------~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------- 421 (1156)
..|+++|+++.|+... ...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 3589999999996321 24689999999999999999999999999999999999999999999987
Q ss_pred ---------eEEEEecCCc--CC-CccHHHHhhcC----CCCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCC
Q 037346 422 ---------TKAYVAQSPW--IQ-SGKIEENILFG----KEMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGI 481 (1156)
Q Consensus 422 ---------~~~~v~Q~~~--~~-~~ti~eni~~~----~~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~ 481 (1156)
+++||+|+|. +. ..|+.+|+... .... .++..++++.++|.+.. ....+.
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~p~ 153 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEH----------YDRYPH 153 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHH----------hcCCCc
Confidence 3799999983 43 35898888632 1111 24556777777775321 123457
Q ss_pred CCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeE
Q 037346 482 NLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKI 557 (1156)
Q Consensus 482 ~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i 557 (1156)
+|||||||||+|||||+.+|++||+||||++||+.++.++++.+.. ..|.|+|+||||++.+. .||+|++|++|+|
T Consensus 154 ~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~i 233 (327)
T PRK11308 154 MFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRC 233 (327)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999887644 34899999999999987 5999999999999
Q ss_pred EEccChHHHHhc
Q 037346 558 TQAGKYSDILNS 569 (1156)
Q Consensus 558 ~~~g~~~~l~~~ 569 (1156)
++.|+.+++.+.
T Consensus 234 ve~g~~~~~~~~ 245 (327)
T PRK11308 234 VEKGTKEQIFNN 245 (327)
T ss_pred EEECCHHHHhcC
Confidence 999999999864
No 268
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-36 Score=334.81 Aligned_cols=201 Identities=24% Similarity=0.374 Sum_probs=168.2
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC-----------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG----------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g----------- 421 (1156)
-+++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 6 ~~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYG---SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEEC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 46899999996 3579999999999999999999999999999999999986 4799999977
Q ss_pred ----eEEEEecCCcCCCccHHHHhhcCCC-----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 ----TKAYVAQSPWIQSGKIEENILFGKE-----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 ----~~~~v~Q~~~~~~~ti~eni~~~~~-----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|++|++.++..|++||+.++.. .+ +++..++++..++.+.+. +.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHH
Confidence 2689999999888899999987521 11 123345566666644221 223456779999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999988776543 35799999999999986 5999999999999999999887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
..
T Consensus 236 ~~ 237 (251)
T PRK14244 236 FK 237 (251)
T ss_pred hc
Confidence 64
No 269
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.2e-36 Score=333.02 Aligned_cols=197 Identities=23% Similarity=0.250 Sum_probs=163.0
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCC--CCCCcEEEEcCe-------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGV--PKESGIIRLCGT------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~--~~~~G~i~~~g~------------- 422 (1156)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+. +|++|+|.++|.
T Consensus 1 l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVE---DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEEC---CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 46899999996 357999999999999999999999999999999999994 799999999873
Q ss_pred -EEEEecCCcCCCc-cHHHHhhcCCC----------CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCC-CCCH
Q 037346 423 -KAYVAQSPWIQSG-KIEENILFGKE----------MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGI-NLSG 485 (1156)
Q Consensus 423 -~~~v~Q~~~~~~~-ti~eni~~~~~----------~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~-~LSg 485 (1156)
++|++|+|.++.. |++||+.+... .+ .++..++++.+++.... ...... +|||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~~LS~ 147 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF----------LNRSVNEGFSG 147 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh----------cccccccCcCH
Confidence 6899999988765 89999976321 11 13345566666664322 112333 5999
Q ss_pred HHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc--CCEEEEEeCCeEEEcc
Q 037346 486 GQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA--ADLILVIKDGKITQAG 561 (1156)
Q Consensus 486 GqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~--~d~i~~l~~G~i~~~g 561 (1156)
|||||++|||||+.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+.. ||++++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 999999999999999999999999999999999998876644 357899999999999864 7999999999999999
Q ss_pred ChHHHH
Q 037346 562 KYSDIL 567 (1156)
Q Consensus 562 ~~~~l~ 567 (1156)
+++++.
T Consensus 228 ~~~~~~ 233 (243)
T TIGR01978 228 DVELAK 233 (243)
T ss_pred CHHHhc
Confidence 887543
No 270
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.1e-36 Score=328.40 Aligned_cols=194 Identities=26% Similarity=0.318 Sum_probs=168.2
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------EEEEec
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT---------KAYVAQ 428 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~---------~~~v~Q 428 (1156)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|++|
T Consensus 1 l~l~~v~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q 77 (223)
T TIGR03740 1 LETKNLSKRFG---KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIE 77 (223)
T ss_pred CEEEeEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcC
Confidence 46899999996 357999999999999999999999999999999999999999999999873 689999
Q ss_pred CCcCCC-ccHHHHhhcCC---CCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCee
Q 037346 429 SPWIQS-GKIEENILFGK---EMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIF 504 (1156)
Q Consensus 429 ~~~~~~-~ti~eni~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~il 504 (1156)
++.++. .|++||+.++. ..++++..++++.+++.+..+ ....+||||||||++||||++.+|+++
T Consensus 78 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~~rv~laral~~~p~ll 146 (223)
T TIGR03740 78 SPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGK-----------KKAKQFSLGMKQRLGIAIALLNHPKLL 146 (223)
T ss_pred CCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHh-----------hhHhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 998775 69999997642 234566777888888865443 344689999999999999999999999
Q ss_pred eeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 505 LLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 505 llDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
||||||++||+.+.+.+.+.+.. .+|+|+|++||+++.+. .||+|++|++|++++.|+.++
T Consensus 147 llDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 147 ILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred EECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999988776644 35789999999999985 599999999999999998754
No 271
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.4e-36 Score=327.72 Aligned_cols=186 Identities=32% Similarity=0.420 Sum_probs=158.4
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------------- 422 (1156)
++++|+++.|+ ++++|+++||++++|++++|+||||||||||+++|+|+++|++|+|.++|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFG---DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEEC---CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 46899999996 357999999999999999999999999999999999999999999999873
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCC----CCCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGK----EMDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~----~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
++|++|+|.++. .|++||+.++. ..+. ++..++++.+++.+.+. ....+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKAD-----------AYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------hCccccCHHHHHHHHH
Confidence 589999998876 69999998752 1222 34455666666654433 3457899999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeE
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKI 557 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i 557 (1156)
|||++.+|+++||||||++||+.+++.+.+.+.. ..|+|+|++||+++.+. .||+|++|++|++
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999988876644 35789999999999986 5999999999974
No 272
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=334.34 Aligned_cols=196 Identities=27% Similarity=0.418 Sum_probs=167.1
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC---CcEEEEcCe-----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE---SGIIRLCGT----------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~---~G~i~~~g~----------- 422 (1156)
.++++|+++.|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.
T Consensus 4 ~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFN---QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeC---CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 589999999996 357999999999999999999999999999999999999986 499998872
Q ss_pred -------EEEEecCCcCCC-ccHHHHhhcCCC------------CC---HHHHHHHHHHhCCchhhhhCCCCCccccccC
Q 037346 423 -------KAYVAQSPWIQS-GKIEENILFGKE------------MD---RERYERVLEACSLKKDLEVLPFGDQTIIGER 479 (1156)
Q Consensus 423 -------~~~v~Q~~~~~~-~ti~eni~~~~~------------~~---~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~ 479 (1156)
++|++|++.++. .|++||+.++.. .. .++.+++++..++.+.+ ...
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFA-----------HQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHH-----------hCC
Confidence 589999998776 599999987531 01 23455666666665433 345
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCC
Q 037346 480 GINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDG 555 (1156)
Q Consensus 480 g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G 555 (1156)
..+||||||||++||||++.+|+++||||||++||+.+.+.+.+.+.. ..|+|+|++||+++.+. .||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 578999999999999999999999999999999999999988876644 24799999999999865 59999999999
Q ss_pred eEEEccChHHH
Q 037346 556 KITQAGKYSDI 566 (1156)
Q Consensus 556 ~i~~~g~~~~l 566 (1156)
++.+.|+++++
T Consensus 230 ~i~~~g~~~~~ 240 (262)
T PRK09984 230 HVFYDGSSQQF 240 (262)
T ss_pred EEEEeCCHHHh
Confidence 99999999886
No 273
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-36 Score=346.97 Aligned_cols=196 Identities=24% Similarity=0.393 Sum_probs=168.9
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC----------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG---------------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g---------------- 421 (1156)
+++ |++++|+. . .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 566 89999962 2 23 89999999999999999999999999999999999999999876
Q ss_pred -eEEEEecCCcCCC-ccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 422 -TKAYVAQSPWIQS-GKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 422 -~~~~v~Q~~~~~~-~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
.++|++|++.+|. .|++||+.|+.. ...++.+++++.+++.+.++. ...+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDR-----------YPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHHHHHH
Confidence 2689999999886 599999998743 334567788888888655543 44689999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhcC
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
.+|+++||||||++||+.+++.+.+.+.. ..|+|+|+|||+++.+. .||+|++|++|++++.|+++++....
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 99999999999999999999988876643 23789999999998875 59999999999999999999987653
No 274
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4.3e-36 Score=327.49 Aligned_cols=194 Identities=27% Similarity=0.397 Sum_probs=158.0
Q ss_pred EEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------------
Q 037346 358 IEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------- 421 (1156)
++++|+++.|+... +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999996321 12699999999999999999999999999999999999999999999987
Q ss_pred -eEEEEecCCc--CC-CccHHHHhhcCC-----CCCHHHH----HHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 -TKAYVAQSPW--IQ-SGKIEENILFGK-----EMDRERY----ERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 -~~~~v~Q~~~--~~-~~ti~eni~~~~-----~~~~~~~----~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|++|+|. ++ ..|++||+.++. ...++.. ++.++.+++.. ........+||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPE----------EVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCCh----------hHhhCCchhcCHHHH
Confidence 2689999993 33 579999997642 1111111 23445555421 123455678999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cC-CCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SS-SKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~-~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
||++||||++.+|+++||||||++||+.+++.+.+.+.. .+ |+|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999988876644 23 789999999999887 59999999999998754
No 275
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-36 Score=333.30 Aligned_cols=202 Identities=28% Similarity=0.394 Sum_probs=169.6
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g---------- 421 (1156)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYG---EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeC---CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 489999999996 35799999999999999999999999999999999999874 899999887
Q ss_pred -----eEEEEecCCcCCCccHHHHhhcCCC----CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 -----TKAYVAQSPWIQSGKIEENILFGKE----MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~ti~eni~~~~~----~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|++|+|.++..|++||+.++.. ... ++.++.++..++...+. ...++.+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 2789999999888999999987521 111 22344555556643322 223566789999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999988776644 34689999999999765 5999999999999999999887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
.+
T Consensus 233 ~~ 234 (250)
T PRK14262 233 VE 234 (250)
T ss_pred Hh
Confidence 64
No 276
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-36 Score=332.03 Aligned_cols=202 Identities=25% Similarity=0.362 Sum_probs=169.3
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcCe---------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCGT--------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g~--------- 422 (1156)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|.++| ++|+|.++|.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYG---ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEEC---CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 488999999996 35799999999999999999999999999999999999986 5999999872
Q ss_pred -----EEEEecCCcCCCccHHHHhhcCCC---C-CH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 423 -----KAYVAQSPWIQSGKIEENILFGKE---M-DR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 423 -----~~~v~Q~~~~~~~ti~eni~~~~~---~-~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
++|++|+|.++..|++||+.++.. . .+ ++..+.++..++.+++. ......+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 689999999888999999987532 1 11 23344555556544332 2334567799999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHH
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDIL 567 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 567 (1156)
|++||||++.+|+++||||||++||+.+...+.+.+.. .+++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999988876644 346899999999998765 9999999999999999988775
Q ss_pred h
Q 037346 568 N 568 (1156)
Q Consensus 568 ~ 568 (1156)
.
T Consensus 233 ~ 233 (249)
T PRK14253 233 S 233 (249)
T ss_pred c
Confidence 3
No 277
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=342.10 Aligned_cols=206 Identities=22% Similarity=0.319 Sum_probs=168.8
Q ss_pred cEEEeeeEEEeCCCCC-CCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC----CCCcEEEEcCe---------
Q 037346 357 AIEIIDGSFSWDFSSP-NPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP----KESGIIRLCGT--------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~-~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~----~~~G~i~~~g~--------- 422 (1156)
.++++|+++.|+.... ..+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4799999999974222 369999999999999999999999999999999999997 48999999883
Q ss_pred --------EEEEecCCc--CC-CccHHHHhhc----CCCC----CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCC
Q 037346 423 --------KAYVAQSPW--IQ-SGKIEENILF----GKEM----DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINL 483 (1156)
Q Consensus 423 --------~~~v~Q~~~--~~-~~ti~eni~~----~~~~----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~L 483 (1156)
++|++|+|. +. ..|+.+++.. .... ..++..+.++..+|.+.. ...+..+.+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPA--------SRLDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhCCchhC
Confidence 799999985 32 3467666542 1111 234566777777775321 1124566799
Q ss_pred CHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEE
Q 037346 484 SGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQ 559 (1156)
Q Consensus 484 SgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~ 559 (1156)
||||||||+|||||+.+|+++|+||||++||+.++..+.+.+.. ..|.|+|+|||+++.+. .||+|++|.+|+|++
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999886644 35889999999999985 599999999999999
Q ss_pred ccChHHHHhcC
Q 037346 560 AGKYSDILNSG 570 (1156)
Q Consensus 560 ~g~~~~l~~~~ 570 (1156)
.|+.+++.+..
T Consensus 235 ~g~~~~~~~~p 245 (326)
T PRK11022 235 TGKAHDIFRAP 245 (326)
T ss_pred ECCHHHHhhCC
Confidence 99999998653
No 278
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=5e-36 Score=329.69 Aligned_cols=197 Identities=21% Similarity=0.354 Sum_probs=171.0
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCCC
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQS 434 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~~ 434 (1156)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.++.
T Consensus 4 ~l~~~~l~~~~~---~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~~~i~~v~q~~~~~~ 80 (251)
T PRK09544 4 LVSLENVSVSFG---QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGKLRIGYVPQKLYLDT 80 (251)
T ss_pred EEEEeceEEEEC---CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCccCEEEecccccccc
Confidence 589999999996 35799999999999999999999999999999999999999999999987 5899999987654
Q ss_pred ---ccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCC
Q 037346 435 ---GKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFS 511 (1156)
Q Consensus 435 ---~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s 511 (1156)
.|+++|+.+.....+++..++++.+++.+.++ ....+||||||||++||||++.+|+++||||||+
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~ 149 (251)
T PRK09544 81 TLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLID-----------APMQKLSGGETQRVLLARALLNRPQLLVLDEPTQ 149 (251)
T ss_pred ccChhHHHHHhccccccHHHHHHHHHHcCChHHHh-----------CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 48999987654445567788888888865543 3456899999999999999999999999999999
Q ss_pred CcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 512 PVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 512 ~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
+||+.++..+.+.+.. . .++|+|++||+++.+. .||+|++|++ ++++.|+++++.+
T Consensus 150 ~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~ 209 (251)
T PRK09544 150 GVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSL 209 (251)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhC
Confidence 9999999988876643 2 3789999999999985 5999999965 7999999988764
No 279
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-36 Score=331.77 Aligned_cols=204 Identities=23% Similarity=0.328 Sum_probs=170.1
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC--C---CCcEEEEcCe--------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP--K---ESGIIRLCGT-------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~--~---~~G~i~~~g~-------- 422 (1156)
+.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.
T Consensus 3 ~~l~~~nl~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFG---KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeC---CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 4589999999996 3579999999999999999999999999999999999986 4 6899999872
Q ss_pred -------EEEEecCCcCCC-ccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 423 -------KAYVAQSPWIQS-GKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 423 -------~~~v~Q~~~~~~-~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
++|++|++.++. .|++||+.++.. .+ +++..+.++.+++...+.. ..+..+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCHH
Confidence 689999998887 599999986421 12 2344566667776543321 123456789999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChH
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYS 564 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 564 (1156)
||||++||||++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999988776543 34689999999999885 59999999999999999998
Q ss_pred HHHhc
Q 037346 565 DILNS 569 (1156)
Q Consensus 565 ~l~~~ 569 (1156)
++...
T Consensus 233 ~~~~~ 237 (252)
T PRK14256 233 KIFTT 237 (252)
T ss_pred HHHhC
Confidence 87643
No 280
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.5e-36 Score=323.24 Aligned_cols=189 Identities=26% Similarity=0.393 Sum_probs=161.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAYV 426 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~v 426 (1156)
++++|+++.|+ . .++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 ~~~~~l~~~~~---~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v 75 (213)
T TIGR01277 1 LALDKVRYEYE---H--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSML 75 (213)
T ss_pred CeEEeeeEEeC---C--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEE
Confidence 36899999995 1 468999999999999999999999999999999999999999999883 6899
Q ss_pred ecCCcCCC-ccHHHHhhcCC--CC-----CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 427 AQSPWIQS-GKIEENILFGK--EM-----DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 427 ~Q~~~~~~-~ti~eni~~~~--~~-----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
+|+|.++. .|++||+.++. .. ++++.+++++.+++.+..... ..+||||||||++||||++
T Consensus 76 ~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~laral~ 144 (213)
T TIGR01277 76 FQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRL-----------PEQLSGGQRQRVALARCLV 144 (213)
T ss_pred eccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCC-----------cccCCHHHHHHHHHHHHHh
Confidence 99998886 59999998642 11 234566678888886554433 3589999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccC
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGK 562 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~ 562 (1156)
.+|+++||||||++||+.+++.+.+.+.. ..+.|+|++||+++.+. .||++++|++|++.+.|.
T Consensus 145 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 145 RPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 99999999999999999999988876644 24789999999999876 599999999999998764
No 281
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=328.95 Aligned_cols=197 Identities=29% Similarity=0.363 Sum_probs=169.5
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAYV 426 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~v 426 (1156)
|+++|++++|+ ++++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 l~~~~l~~~~~---~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (232)
T cd03300 1 IELENVSKFYG---GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTV 77 (232)
T ss_pred CEEEeEEEEeC---CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEE
Confidence 46899999996 347999999999999999999999999999999999999999999999873 6999
Q ss_pred ecCCcCCCc-cHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 427 AQSPWIQSG-KIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 427 ~Q~~~~~~~-ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
+|++.++.+ |++||+.++.. .+ +++++++++..++.+.+.. ...+||||||||++||||++
T Consensus 78 ~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~lS~G~~qrl~laral~ 146 (232)
T cd03300 78 FQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANR-----------KPSQLSGGQQQRVAIARALV 146 (232)
T ss_pred ecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHHHHHh
Confidence 999998864 99999986521 12 3455667777777655443 34689999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||++++|++|++.+.|+++++..
T Consensus 147 ~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~ 220 (232)
T cd03300 147 NEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYE 220 (232)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHh
Confidence 99999999999999999999998876643 2 3899999999999886 599999999999999999887764
No 282
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-37 Score=307.74 Aligned_cols=199 Identities=28% Similarity=0.431 Sum_probs=169.4
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.+..+|+.++|. .+++.+++||++++||++++.||||+||||.+.++.|+.+|++|+|.++|.
T Consensus 4 ~L~a~~l~K~y~---kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 4 TLVAENLAKSYK---KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred EEEehhhhHhhC---CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 478899999996 568999999999999999999999999999999999999999999999983
Q ss_pred EEEEecCCcCCCc-cHHHHhhcCCCC---C------HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 423 KAYVAQSPWIQSG-KIEENILFGKEM---D------RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~-ti~eni~~~~~~---~------~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
+||+||+|.+|.. ||+|||..-.+. + +++.++.++...+.+. -...+.+||||||.|+.
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hl-----------r~~~a~sLSGGERRR~E 149 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHL-----------RDSKAYSLSGGERRRVE 149 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHH-----------hcCcccccccchHHHHH
Confidence 6999999999976 999999764332 1 1223445555555432 24567899999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCC-CccccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQV-EFLPAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~-~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|||||..+|+.+||||||+++||.+...|-+.+.. .+|-.|++.-|+. +++..|||.|++.+|++...|+++++.++
T Consensus 150 IARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 150 IARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 99999999999999999999999998887554422 5678899999997 56889999999999999999999999864
No 283
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-36 Score=331.65 Aligned_cols=202 Identities=25% Similarity=0.349 Sum_probs=169.3
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g---------- 421 (1156)
.|+++|++|.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.++ ++|+|.++|
T Consensus 6 ~i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYG---EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEEC---CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 589999999996 35799999999999999999999999999999999998753 489999876
Q ss_pred -----eEEEEecCCcCCCccHHHHhhcCCCC----CH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 -----TKAYVAQSPWIQSGKIEENILFGKEM----DR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~ti~eni~~~~~~----~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|++|+|.+++.|++||+.++... +. ++..++++.+++.+.+. +..++.+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVK-------DRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhH-------HHhhcChhhCCHHHH
Confidence 26899999998888999999986321 11 23344555555543322 234567789999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.+++++.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|+.+++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 999999999999999999999999999999988776644 34689999999999986 5999999999999999999887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
..
T Consensus 236 ~~ 237 (253)
T PRK14261 236 FE 237 (253)
T ss_pred Hh
Confidence 64
No 284
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=298.74 Aligned_cols=194 Identities=28% Similarity=0.432 Sum_probs=163.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------EEEEecC
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------KAYVAQS 429 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------~~~v~Q~ 429 (1156)
+.+++++.+|+.. ..++|+|+|++|.+||+++++||||||||||||+++|+++|..|+|.+||+ -|.|+|+
T Consensus 4 l~~~~~sl~y~g~-~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ~ 82 (259)
T COG4525 4 LNVSHLSLSYEGK-PRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQN 82 (259)
T ss_pred eehhheEEecCCc-chhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEecc
Confidence 5567889999753 356999999999999999999999999999999999999999999999986 3899999
Q ss_pred CcCCC-ccHHHHhhcCCCC---C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCC
Q 037346 430 PWIQS-GKIEENILFGKEM---D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDA 501 (1156)
Q Consensus 430 ~~~~~-~ti~eni~~~~~~---~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~ 501 (1156)
+-+++ .++.||+.||... + .+...+.+..++|.+.-+ ....+||||||||+.|||||..+|
T Consensus 83 ~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~-----------~~i~qLSGGmrQRvGiARALa~eP 151 (259)
T COG4525 83 EALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEH-----------KYIWQLSGGMRQRVGIARALAVEP 151 (259)
T ss_pred CccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccc-----------cceEeecchHHHHHHHHHHhhcCc
Confidence 87665 5999999998642 2 244556677777765332 334689999999999999999999
Q ss_pred CeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEe--CCeEEEccCh
Q 037346 502 DIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIK--DGKITQAGKY 563 (1156)
Q Consensus 502 ~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~--~G~i~~~g~~ 563 (1156)
+.|+||||++|||+-+++++-+.++. ..|+.+++|||+++.. -.|+++++|. .|+|++.-++
T Consensus 152 ~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 152 QLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred ceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeEecCC
Confidence 99999999999999999988665543 6799999999999885 4699999997 6899876544
No 285
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=5.3e-36 Score=327.94 Aligned_cols=197 Identities=35% Similarity=0.477 Sum_probs=168.0
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----------eEEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-----------TKAYV 426 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-----------~~~~v 426 (1156)
++++|++++|+ ++++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 1 i~i~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~ 77 (237)
T TIGR00968 1 IEIANISKRFG---SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFV 77 (237)
T ss_pred CEEEEEEEEEC---CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEE
Confidence 46899999996 34799999999999999999999999999999999999999999999986 36999
Q ss_pred ecCCcCCCc-cHHHHhhcCCC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 427 AQSPWIQSG-KIEENILFGKE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 427 ~Q~~~~~~~-ti~eni~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
||+|.++.+ |++||+.++.. .+ .++..++++.+++.+..+ ....+||||||||++||||++
T Consensus 78 ~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~lS~G~~qrl~laral~ 146 (237)
T TIGR00968 78 FQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGD-----------RYPNQLSGGQRQRVALARALA 146 (237)
T ss_pred ecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHHHHHHHHHHHh
Confidence 999988865 99999987542 11 233455666666644332 344689999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cC-CCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV--SS-SKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~--~~-~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
++|+++||||||++||+.+++.+.+.+.. .+ ++|+|++||+++.+. .||++++|++|++++.|+.+++.+
T Consensus 147 ~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 220 (237)
T TIGR00968 147 VEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYD 220 (237)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHc
Confidence 99999999999999999999998876643 23 789999999999875 499999999999999999888764
No 286
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-36 Score=336.22 Aligned_cols=203 Identities=25% Similarity=0.389 Sum_probs=169.7
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g--------- 421 (1156)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 38 ~~l~i~~l~~~~~---~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYG---DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEEC---CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 4599999999996 3579999999999999999999999999999999999997 6899999976
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCC---C---CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKE---M---DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~---~---~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
.++|++|++.++..|++||+.++.. . ..++.+++++.+++...+. ...++++.+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVK-------DQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhH-------HHHhCCcccCCHHHHH
Confidence 2689999999888899999987521 1 1334566676666643322 1234567899999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEE-EEeCCeEEEccChHHH
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLIL-VIKDGKITQAGKYSDI 566 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~-~l~~G~i~~~g~~~~l 566 (1156)
|++|||||+.+|+++||||||++||+.+.+.+.+.+.. .+++|+|++||+++.+. .||+++ +|++|++++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999988876644 23579999999999976 499975 5799999999998887
Q ss_pred Hh
Q 037346 567 LN 568 (1156)
Q Consensus 567 ~~ 568 (1156)
..
T Consensus 268 ~~ 269 (285)
T PRK14254 268 FE 269 (285)
T ss_pred Hh
Confidence 54
No 287
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-36 Score=333.55 Aligned_cols=204 Identities=24% Similarity=0.346 Sum_probs=171.3
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g--------- 421 (1156)
..++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 20 ~~l~i~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~ 96 (276)
T PRK14271 20 PAMAAVNLTLGFA---GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDV 96 (276)
T ss_pred cEEEEeeEEEEEC---CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchh
Confidence 4689999999996 35799999999999999999999999999999999999986 699999987
Q ss_pred -----eEEEEecCCcCCCccHHHHhhcCCC----CCHHH----HHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 -----TKAYVAQSPWIQSGKIEENILFGKE----MDRER----YERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~ti~eni~~~~~----~~~~~----~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|++|+|.+++.|++||+.++.. ...+. ..+.++.+++...+ .+.+.+.+.+||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LSgGq~ 169 (276)
T PRK14271 97 LEFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAV-------KDRLSDSPFRLSGGQQ 169 (276)
T ss_pred HHHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhCCcccCCHHHH
Confidence 2689999999888999999987531 22222 23455566654322 1233466789999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.+++.+++.+.. .+++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 170 qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 249 (276)
T PRK14271 170 QLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQL 249 (276)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999988876644 23589999999999876 5999999999999999999988
Q ss_pred Hhc
Q 037346 567 LNS 569 (1156)
Q Consensus 567 ~~~ 569 (1156)
.+.
T Consensus 250 ~~~ 252 (276)
T PRK14271 250 FSS 252 (276)
T ss_pred HhC
Confidence 754
No 288
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-36 Score=336.50 Aligned_cols=205 Identities=23% Similarity=0.373 Sum_probs=169.7
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC--------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG-------- 421 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g-------- 421 (1156)
+..++++|+++.|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|
T Consensus 37 ~~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~ 113 (286)
T PRK14275 37 KPHVVAKNFSIYYG---EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFT 113 (286)
T ss_pred ceEEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhccc
Confidence 34689999999996 3469999999999999999999999999999999999864 4999999976
Q ss_pred -------eEEEEecCCcCCCccHHHHhhcCCC---C-CH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 422 -------TKAYVAQSPWIQSGKIEENILFGKE---M-DR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 422 -------~~~~v~Q~~~~~~~ti~eni~~~~~---~-~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
.++|++|+|.++..|++||+.++.. . +. ++..++++.+++...+. ......+.+||||
T Consensus 114 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgG 186 (286)
T PRK14275 114 DEVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS-------DRLDKNALGLSGG 186 (286)
T ss_pred chHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh-------hHhhCChhhCCHH
Confidence 2689999999888899999987632 1 11 23344555555532221 1234567899999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChH
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYS 564 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 564 (1156)
||||++|||||+.+|+++||||||++||+.+.+.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 187 q~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~ 266 (286)
T PRK14275 187 QQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTA 266 (286)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998876644 34689999999999986 59999999999999999998
Q ss_pred HHHhc
Q 037346 565 DILNS 569 (1156)
Q Consensus 565 ~l~~~ 569 (1156)
++.+.
T Consensus 267 ~~~~~ 271 (286)
T PRK14275 267 QLFTN 271 (286)
T ss_pred HHHhC
Confidence 87653
No 289
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=4e-36 Score=312.38 Aligned_cols=158 Identities=39% Similarity=0.565 Sum_probs=144.8
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-------------eEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------TKA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------~~~ 424 (1156)
++++|++++|+.. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4689999999632 34699999999999999999999999999999999999999999999987 268
Q ss_pred EEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCee
Q 037346 425 YVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIF 504 (1156)
Q Consensus 425 ~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~il 504 (1156)
|++|+|++++.|++||+ ||||||||++||||++.+|+++
T Consensus 80 ~~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~l 118 (173)
T cd03246 80 YLPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRIL 118 (173)
T ss_pred EECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999888999998 9999999999999999999999
Q ss_pred eeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeCCeE
Q 037346 505 LLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKDGKI 557 (1156)
Q Consensus 505 llDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i 557 (1156)
||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+..||++++|++|++
T Consensus 119 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 119 VLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999998876644 357899999999998878999999999974
No 290
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-36 Score=331.82 Aligned_cols=204 Identities=28% Similarity=0.377 Sum_probs=172.2
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC--------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG-------- 421 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g-------- 421 (1156)
.+.|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|
T Consensus 14 ~~~l~~~~l~~~~~---~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYG---GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEEC---CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 35699999999996 34799999999999999999999999999999999999875 799999865
Q ss_pred ---------eEEEEecCCcCCCccHHHHhhcCCC---C-----CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCC
Q 037346 422 ---------TKAYVAQSPWIQSGKIEENILFGKE---M-----DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLS 484 (1156)
Q Consensus 422 ---------~~~~v~Q~~~~~~~ti~eni~~~~~---~-----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LS 484 (1156)
.++|++|++.++..|++||+.++.. . .+++...+++.+++.+++. +..++.+.+||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVK-------DRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhh-------HHHhCCcccCC
Confidence 2689999999988899999987531 1 1244556666666643332 23456678999
Q ss_pred HHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccC
Q 037346 485 GGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGK 562 (1156)
Q Consensus 485 gGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~ 562 (1156)
||||||++||||++.+|+++||||||++||+.+.+.+.+.+.. .++.|+|+|||+++.+. .||++++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999988876644 34689999999999986 599999999999999999
Q ss_pred hHHHHh
Q 037346 563 YSDILN 568 (1156)
Q Consensus 563 ~~~l~~ 568 (1156)
.+++..
T Consensus 244 ~~~~~~ 249 (265)
T PRK14252 244 TDTIFI 249 (265)
T ss_pred HHHHHh
Confidence 988764
No 291
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-36 Score=331.29 Aligned_cols=202 Identities=24% Similarity=0.392 Sum_probs=170.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcCe---------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCGT--------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g~--------- 422 (1156)
.++++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 7 ~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 7 AIKVKDLSFYYN---TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred eEEEEEEEEEEC---CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 589999999996 34699999999999999999999999999999999999985 4899998862
Q ss_pred ------EEEEecCCcCCCccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 423 ------KAYVAQSPWIQSGKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 ------~~~v~Q~~~~~~~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
++|++|++.+++.|++||+.++.. .+ .++..++++.+++.+++.. ..+..+.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHHH
Confidence 689999999888999999987521 12 2344566777777543321 23456779999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEe-----CCeEEEcc
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIK-----DGKITQAG 561 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~-----~G~i~~~g 561 (1156)
||++||||++.+|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 999999999999999999999999999999988876644 34689999999999986 599999997 59999999
Q ss_pred ChHHHHh
Q 037346 562 KYSDILN 568 (1156)
Q Consensus 562 ~~~~l~~ 568 (1156)
+++++.+
T Consensus 237 ~~~~~~~ 243 (259)
T PRK14260 237 VTTQIFS 243 (259)
T ss_pred CHHHHhc
Confidence 9998764
No 292
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=9.8e-36 Score=331.45 Aligned_cols=203 Identities=21% Similarity=0.366 Sum_probs=168.6
Q ss_pred cEEEeeeEEEeCCC------CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------
Q 037346 357 AIEIIDGSFSWDFS------SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~------~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------- 421 (1156)
.++++|++++|+.. ++.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 58999999999631 124799999999999999999999999999999999999999999999987
Q ss_pred ----eEEEEecCCc--CC-CccHHHHhhcCC----CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 422 ----TKAYVAQSPW--IQ-SGKIEENILFGK----EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 422 ----~~~~v~Q~~~--~~-~~ti~eni~~~~----~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
.++|++|+|. ++ ..|+.+|+.++. ... .++..++++.+++..... .....+||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~----------~~~~~~LS~G 153 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA----------SYYPHMLAPG 153 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH----------hcCchhcCHH
Confidence 2789999984 33 348999987531 111 234566777777743221 1234689999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccC
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGK 562 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~ 562 (1156)
||||++||||++.+|+++||||||++||+.+.+.+.+.+.. . .|+|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 154 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 233 (267)
T PRK15112 154 QKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGS 233 (267)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCC
Confidence 99999999999999999999999999999999988876644 2 47899999999999875 99999999999999999
Q ss_pred hHHHHhc
Q 037346 563 YSDILNS 569 (1156)
Q Consensus 563 ~~~l~~~ 569 (1156)
++++...
T Consensus 234 ~~~~~~~ 240 (267)
T PRK15112 234 TADVLAS 240 (267)
T ss_pred HHHHhcC
Confidence 9988754
No 293
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=331.52 Aligned_cols=205 Identities=25% Similarity=0.351 Sum_probs=171.1
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC--------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG-------- 421 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g-------- 421 (1156)
...++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 18 ~~~l~~~nl~~~~~---~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~ 94 (274)
T PRK14265 18 HSVFEVEGVKVFYG---GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQI 94 (274)
T ss_pred CceEEEeeEEEEeC---CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccc
Confidence 34799999999996 34699999999999999999999999999999999999863 589999876
Q ss_pred -------eEEEEecCCcCCCccHHHHhhcCCC---C---CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 -------TKAYVAQSPWIQSGKIEENILFGKE---M---DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 -------~~~~v~Q~~~~~~~ti~eni~~~~~---~---~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|++|++.+++.|+.||+.++.. . .++...+.++.+++...+. ......+.+||||||
T Consensus 95 ~~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~ 167 (274)
T PRK14265 95 NSVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVK-------DKLKEKGTALSGGQQ 167 (274)
T ss_pred hhHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhH-------HHhcCCcccCCHHHH
Confidence 2689999999888899999987632 1 1223345566666643332 123456788999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEe---------CCeE
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIK---------DGKI 557 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~---------~G~i 557 (1156)
||++|||||+.+|+++||||||++||+.+.+.+.+.+.. .+++|+|++||+++.+. .||++++|+ +|++
T Consensus 168 qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~ 247 (274)
T PRK14265 168 QRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKL 247 (274)
T ss_pred HHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceE
Confidence 999999999999999999999999999999998887654 34689999999999886 599999997 8999
Q ss_pred EEccChHHHHhc
Q 037346 558 TQAGKYSDILNS 569 (1156)
Q Consensus 558 ~~~g~~~~l~~~ 569 (1156)
++.|+.+++...
T Consensus 248 ~~~g~~~~~~~~ 259 (274)
T PRK14265 248 VEFSPTEQMFGS 259 (274)
T ss_pred EEeCCHHHHHhC
Confidence 999999988643
No 294
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=329.20 Aligned_cols=204 Identities=22% Similarity=0.314 Sum_probs=174.3
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcCe--------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCGT-------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g~-------- 422 (1156)
..+.+++.++.|. +.++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 7 ~~~~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~ 83 (261)
T PRK14263 7 IVMDCKLDKIFYG---NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVD 83 (261)
T ss_pred ceEEEEeEEEEeC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccc
Confidence 3588999999995 35799999999999999999999999999999999999986 7999999872
Q ss_pred -------EEEEecCCcCCCccHHHHhhcCCCC------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHH
Q 037346 423 -------KAYVAQSPWIQSGKIEENILFGKEM------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQ 489 (1156)
Q Consensus 423 -------~~~v~Q~~~~~~~ti~eni~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkq 489 (1156)
++|++|++.++..|++||+.++... ..++..++++.+++...+.. ..++.+.+|||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~q 156 (261)
T PRK14263 84 PVVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQ 156 (261)
T ss_pred hHhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHH
Confidence 6999999999989999999886421 12456677777777554432 234567799999999
Q ss_pred HHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEe--------CCeEEE
Q 037346 490 RIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIK--------DGKITQ 559 (1156)
Q Consensus 490 Ri~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~--------~G~i~~ 559 (1156)
|++||||++++|++|||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||+|++|+ +|++++
T Consensus 157 rv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~ 236 (261)
T PRK14263 157 RLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVE 236 (261)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEE
Confidence 99999999999999999999999999999998887654 34689999999999875 599999996 899999
Q ss_pred ccChHHHHhc
Q 037346 560 AGKYSDILNS 569 (1156)
Q Consensus 560 ~g~~~~l~~~ 569 (1156)
.|+++++.+.
T Consensus 237 ~g~~~~~~~~ 246 (261)
T PRK14263 237 MGPTAQIFQN 246 (261)
T ss_pred eCCHHHHHhC
Confidence 9999988753
No 295
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-36 Score=340.80 Aligned_cols=205 Identities=18% Similarity=0.297 Sum_probs=169.4
Q ss_pred cEEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC----CCCcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP----KESGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~----~~~G~i~~~g---------- 421 (1156)
.++++|++++|+... ...+++|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 489999999996422 3469999999999999999999999999999999999986 5899999987
Q ss_pred -------eEEEEecCCcC---CCccHHHHhhcC---C----C-C-----CHHHHHHHHHHhCCchhhhhCCCCCcccccc
Q 037346 422 -------TKAYVAQSPWI---QSGKIEENILFG---K----E-M-----DRERYERVLEACSLKKDLEVLPFGDQTIIGE 478 (1156)
Q Consensus 422 -------~~~~v~Q~~~~---~~~ti~eni~~~---~----~-~-----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~ 478 (1156)
.++||+|+|.. ...||.+|+.+. . . . ..++..++++.++|.+... ...+
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD--------AMRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH--------HHhC
Confidence 27899999963 245899998642 0 0 0 1235567778888864211 1134
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeC
Q 037346 479 RGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKD 554 (1156)
Q Consensus 479 ~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~ 554 (1156)
...+|||||||||+|||||+.+|+++||||||++||+.++.++.+.+.. . .|.|+|+||||++.+. .||+|++|++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 4578999999999999999999999999999999999999998876644 2 4899999999999986 5999999999
Q ss_pred CeEEEccChHHHHhc
Q 037346 555 GKITQAGKYSDILNS 569 (1156)
Q Consensus 555 G~i~~~g~~~~l~~~ 569 (1156)
|+|++.|+.+++.+.
T Consensus 235 G~ive~g~~~~i~~~ 249 (330)
T PRK15093 235 GQTVETAPSKELVTT 249 (330)
T ss_pred CEEEEECCHHHHHhC
Confidence 999999999998764
No 296
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-36 Score=332.42 Aligned_cols=198 Identities=28% Similarity=0.432 Sum_probs=166.2
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC----------eEEEE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG----------TKAYV 426 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g----------~~~~v 426 (1156)
.++++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 6 ~l~~~~l~~~~~~--~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v 83 (272)
T PRK15056 6 GIVVNDVTVTWRN--GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYV 83 (272)
T ss_pred eEEEEeEEEEecC--CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEe
Confidence 5899999999962 35799999999999999999999999999999999999999999999987 38999
Q ss_pred ecCCcC---CCccHHHHhhcCCC-----------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 427 AQSPWI---QSGKIEENILFGKE-----------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 427 ~Q~~~~---~~~ti~eni~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
+|+|.+ +..++++|+.++.. .++++.+++++.+++.+..+ ....+||||||||++
T Consensus 84 ~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgG~~qrv~ 152 (272)
T PRK15056 84 PQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRH-----------RQIGELSGGQKKRVF 152 (272)
T ss_pred ccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhc-----------CCcccCCHHHHHHHH
Confidence 999864 34578999875421 11234556677777754432 345689999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||||+.+|+++||||||++||+.+.+.+.+.+.. .+|+|+|++||+++.+. .||+++++ +|++++.|+++++..
T Consensus 153 laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~~ 230 (272)
T PRK15056 153 LARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTFT 230 (272)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhccC
Confidence 99999999999999999999999999998876643 35889999999998875 59999877 899999999988753
No 297
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.1e-35 Score=329.78 Aligned_cols=200 Identities=22% Similarity=0.358 Sum_probs=165.3
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYG---PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcC---CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 589999999996 357999999999999999999999999999999999999999999998773
Q ss_pred --------EEEEecCCc--CC-CccHHHHhhcCC----CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCC
Q 037346 423 --------KAYVAQSPW--IQ-SGKIEENILFGK----EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINL 483 (1156)
Q Consensus 423 --------~~~v~Q~~~--~~-~~ti~eni~~~~----~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~L 483 (1156)
++|++|++. ++ ..|+.+|+.+.. ..+ .++..++++.+++.. +..++.+.+|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~L 152 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTF 152 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccC
Confidence 689999984 33 358899986421 111 122334444544432 2345667899
Q ss_pred CHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEE
Q 037346 484 SGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQ 559 (1156)
Q Consensus 484 SgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~ 559 (1156)
|||||||++||||++.+|+++||||||++||+.+.+.+.+.+.. ..|.|+|++||+++.+. .||+|++|++|++++
T Consensus 153 S~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~ 232 (258)
T PRK11701 153 SGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVE 232 (258)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999988876543 23789999999999987 599999999999999
Q ss_pred ccChHHHHhc
Q 037346 560 AGKYSDILNS 569 (1156)
Q Consensus 560 ~g~~~~l~~~ 569 (1156)
.|+++++...
T Consensus 233 ~~~~~~~~~~ 242 (258)
T PRK11701 233 SGLTDQVLDD 242 (258)
T ss_pred eCCHHHHhcC
Confidence 9999887643
No 298
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=336.15 Aligned_cols=203 Identities=25% Similarity=0.393 Sum_probs=170.5
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g--------- 421 (1156)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 44 ~~l~i~nl~~~~~---~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYG---DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 4689999999996 3579999999999999999999999999999999999986 6899999986
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCCC--------------------CHHHHHHHHHHhCCchhhhhCCCCCccc
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKEM--------------------DRERYERVLEACSLKKDLEVLPFGDQTI 475 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~~--------------------~~~~~~~~~~~~~l~~~~~~~~~g~~t~ 475 (1156)
.++|++|++.+++.|++||+.++... .+++..++++.+++...+ .+.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV-------NDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh-------hHH
Confidence 26899999999889999999975311 123345566666664332 233
Q ss_pred cccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEE-EEE
Q 037346 476 IGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLI-LVI 552 (1156)
Q Consensus 476 v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i-~~l 552 (1156)
.+..+.+||||||||++|||||+++|++|||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||++ ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 4567789999999999999999999999999999999999999988776644 33589999999999976 59997 577
Q ss_pred eCCeEEEccChHHHHh
Q 037346 553 KDGKITQAGKYSDILN 568 (1156)
Q Consensus 553 ~~G~i~~~g~~~~l~~ 568 (1156)
++|++++.|+++++.+
T Consensus 274 ~~G~i~~~g~~~~~~~ 289 (305)
T PRK14264 274 TGGELVEYDDTDKIFE 289 (305)
T ss_pred cCCEEEEeCCHHHHHh
Confidence 9999999999988764
No 299
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=329.79 Aligned_cols=202 Identities=24% Similarity=0.341 Sum_probs=168.1
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-----CCcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-----ESGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-----~~G~i~~~g---------- 421 (1156)
.++++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 4 ~l~i~~v~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYG---SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEEC---CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 489999999996 34799999999999999999999999999999999999974 699999977
Q ss_pred -----eEEEEecCCcCCC-ccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 422 -----TKAYVAQSPWIQS-GKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~-~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
.++|++|++.++. .|++||+.++.. .. +++.+++++.+++...+. ......+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVK-------DRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHH
Confidence 2689999998876 599999986421 11 123455666666643221 12345667899999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEe------CCeEEE
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIK------DGKITQ 559 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~------~G~i~~ 559 (1156)
|||++||||++.+|+++||||||++||+.++..+.+.+.. .+++|+|++||+++.+. .||+|++|+ +|++++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 9999999999999999999999999999999988776644 34689999999999875 599999996 899999
Q ss_pred ccChHHHHh
Q 037346 560 AGKYSDILN 568 (1156)
Q Consensus 560 ~g~~~~l~~ 568 (1156)
.|+++++..
T Consensus 234 ~~~~~~~~~ 242 (258)
T PRK14241 234 IDDTEKIFS 242 (258)
T ss_pred cCCHHHHHh
Confidence 999988864
No 300
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=328.92 Aligned_cols=203 Identities=26% Similarity=0.378 Sum_probs=171.6
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-----CCCcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-----KESGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-----~~~G~i~~~g---------- 421 (1156)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|
T Consensus 3 ~l~~~~v~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFD---DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 478999999996 3579999999999999999999999999999999999864 4899999887
Q ss_pred -----eEEEEecCCcCCCccHHHHhhcCCC----CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 422 -----TKAYVAQSPWIQSGKIEENILFGKE----MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~ti~eni~~~~~----~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
.++|+||+|++|+.|++||+.++.. .++ +++.+.++.+++.+.+.. ..++.+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD-------KLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH-------HHhCCcccCCHHHH
Confidence 2699999999998999999987521 122 345566777777654432 13456789999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++|||||+++|+++||||||++||+.+...+.+.+.. .++.|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 999999999999999999999999999999988776644 357899999999998765 999999999999999999888
Q ss_pred Hhc
Q 037346 567 LNS 569 (1156)
Q Consensus 567 ~~~ 569 (1156)
...
T Consensus 233 ~~~ 235 (250)
T PRK14266 233 FIN 235 (250)
T ss_pred HhC
Confidence 643
No 301
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=9.3e-36 Score=339.22 Aligned_cols=207 Identities=20% Similarity=0.358 Sum_probs=169.2
Q ss_pred ccEEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC---CcEEEEcC----------
Q 037346 356 TAIEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE---SGIIRLCG---------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~---~G~i~~~g---------- 421 (1156)
..++++|+++.|+... ...+++|+||+|++||+++|+|+||||||||+++|+|+++|. +|+|.++|
T Consensus 11 ~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~ 90 (330)
T PRK09473 11 ALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKE 90 (330)
T ss_pred ceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHH
Confidence 4689999999996432 246999999999999999999999999999999999999996 99999987
Q ss_pred -------eEEEEecCCc--CC-CccHHHHhhcC----CCCCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCC
Q 037346 422 -------TKAYVAQSPW--IQ-SGKIEENILFG----KEMDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINL 483 (1156)
Q Consensus 422 -------~~~~v~Q~~~--~~-~~ti~eni~~~----~~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~L 483 (1156)
.++||+|+|. +. ..|+.+|+... ...+. ++..+.++..+|.+ +. ..++..+.+|
T Consensus 91 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~-------~~-~~~~~~p~~L 162 (330)
T PRK09473 91 LNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPE-------AR-KRMKMYPHEF 162 (330)
T ss_pred HHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCC-------hH-HHhcCCcccC
Confidence 3799999983 43 35888877532 11222 23445555555532 11 2245677899
Q ss_pred CHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEE
Q 037346 484 SGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQ 559 (1156)
Q Consensus 484 SgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~ 559 (1156)
||||||||+|||||+.+|+++|+||||++||+.++..+.+.+.. ..|.|+|+||||++.+. .||+|++|++|+|++
T Consensus 163 SgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive 242 (330)
T PRK09473 163 SGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTME 242 (330)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999998876543 34889999999999986 599999999999999
Q ss_pred ccChHHHHhcC
Q 037346 560 AGKYSDILNSG 570 (1156)
Q Consensus 560 ~g~~~~l~~~~ 570 (1156)
.|+.+++.+..
T Consensus 243 ~g~~~~i~~~p 253 (330)
T PRK09473 243 YGNARDVFYQP 253 (330)
T ss_pred ECCHHHHHhCC
Confidence 99999998643
No 302
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-36 Score=293.21 Aligned_cols=200 Identities=27% Similarity=0.424 Sum_probs=173.8
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..++++|+.+.|. +..+|+++|++.++|+.+.|+|.|||||||+|+||.=+-.|+.|.|.++|.
T Consensus 5 ~~l~v~dlHK~~G---~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~ 81 (256)
T COG4598 5 NALEVEDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLK 81 (256)
T ss_pred cceehhHHHhhcc---cchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCee
Confidence 4689999999996 457999999999999999999999999999999999999999999999983
Q ss_pred -------------EEEEecCCcCCC-ccHHHHhhcC------CCC--CHHHHHHHHHHhCCchhhhhCCCCCccccccCC
Q 037346 423 -------------KAYVAQSPWIQS-GKIEENILFG------KEM--DRERYERVLEACSLKKDLEVLPFGDQTIIGERG 480 (1156)
Q Consensus 423 -------------~~~v~Q~~~~~~-~ti~eni~~~------~~~--~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g 480 (1156)
.++|+|+..+.+ .||.||+.-. .+- ..++.+..+...++.+.-+..|
T Consensus 82 ~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP----------- 150 (256)
T COG4598 82 PADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYP----------- 150 (256)
T ss_pred eCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCc-----------
Confidence 379999988875 5999998743 222 2356667788888887666555
Q ss_pred CCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeE
Q 037346 481 INLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKI 557 (1156)
Q Consensus 481 ~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i 557 (1156)
..|||||+||++|||||..+|+++|+|||||||||+-.-++.+.+.. ..|+|.++|||.+.+.+. +.+|+++.+|.|
T Consensus 151 ~~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~i 230 (256)
T COG4598 151 AHLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKI 230 (256)
T ss_pred cccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeeccee
Confidence 68999999999999999999999999999999999987777665433 679999999999999986 899999999999
Q ss_pred EEccChHHHHhc
Q 037346 558 TQAGKYSDILNS 569 (1156)
Q Consensus 558 ~~~g~~~~l~~~ 569 (1156)
-++|+|+++..+
T Consensus 231 EE~G~P~qvf~n 242 (256)
T COG4598 231 EEEGPPEQVFGN 242 (256)
T ss_pred cccCChHHHhcC
Confidence 999999999854
No 303
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=328.31 Aligned_cols=203 Identities=25% Similarity=0.335 Sum_probs=167.8
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC--C---CCcEEEEcCe---------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP--K---ESGIIRLCGT--------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~--~---~~G~i~~~g~--------- 422 (1156)
.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|..+ | ++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYG---KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEEC---CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 589999999996 3579999999999999999999999999999999999875 4 5899998772
Q ss_pred ------EEEEecCCcCCCccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 423 ------KAYVAQSPWIQSGKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 ------~~~v~Q~~~~~~~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
++|++|++.++..|++||+.++.. .. +++..+.++.+++...+. ......+.+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHH
Confidence 689999999888999999986521 11 123344455555532221 223456679999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
||++||||++.+|+++||||||++||+.+++.+.+.+.. .++.|+|++||+++.+. .||+|++|++|++++.|+..++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999998876644 33589999999999986 5999999999999999998887
Q ss_pred Hhc
Q 037346 567 LNS 569 (1156)
Q Consensus 567 ~~~ 569 (1156)
...
T Consensus 235 ~~~ 237 (252)
T PRK14255 235 FLN 237 (252)
T ss_pred hcC
Confidence 643
No 304
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=324.84 Aligned_cols=196 Identities=31% Similarity=0.424 Sum_probs=168.3
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----------eEEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-----------TKAYV 426 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-----------~~~~v 426 (1156)
|+++|+++.|+ + ++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 1 l~~~~l~~~~~---~-~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~ 76 (235)
T cd03299 1 LKVENLSKDWK---E-FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYV 76 (235)
T ss_pred CeeEeEEEEeC---C-ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEE
Confidence 46899999996 2 379999999999999999999999999999999999999999999988 37999
Q ss_pred ecCCcCCC-ccHHHHhhcCCCC-------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 427 AQSPWIQS-GKIEENILFGKEM-------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 427 ~Q~~~~~~-~ti~eni~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
+|++.++. .|+.||+.++... ..++..+.++.+++.+.+. +...+||||||||++||||++
T Consensus 77 ~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~laral~ 145 (235)
T cd03299 77 PQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLN-----------RKPETLSGGEQQRVAIARALV 145 (235)
T ss_pred eecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHh-----------cCcccCCHHHHHHHHHHHHHH
Confidence 99998875 6999999875321 1234456677777765544 344689999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
.+|++++|||||++||+.+++++.+.+.. ..++|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 146 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 219 (235)
T cd03299 146 VNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFK 219 (235)
T ss_pred cCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 99999999999999999999998876643 23899999999999876 599999999999999999887764
No 305
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=328.56 Aligned_cols=203 Identities=26% Similarity=0.369 Sum_probs=166.4
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC-----CcEEEEcC----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE-----SGIIRLCG---------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~-----~G~i~~~g---------- 421 (1156)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYG---DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEEC---CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 488999999996 357999999999999999999999999999999999999874 79999876
Q ss_pred -----eEEEEecCCcCCC-ccHHHHhhcCCC---C-CHH----HHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 422 -----TKAYVAQSPWIQS-GKIEENILFGKE---M-DRE----RYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~-~ti~eni~~~~~---~-~~~----~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
.++|++|++.++. .|+.||+.++.. . .++ +..+.++..++...+. ......+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVK-------DRLKTPATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhh-------hhhcCCcccCCHHH
Confidence 2689999998887 499999986421 1 222 2223344444432221 11234567899999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||++||||++++|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999988876644 34689999999999987 599999999999999999988
Q ss_pred HHhc
Q 037346 566 ILNS 569 (1156)
Q Consensus 566 l~~~ 569 (1156)
+...
T Consensus 234 ~~~~ 237 (252)
T PRK14272 234 LFTN 237 (252)
T ss_pred HHhC
Confidence 8653
No 306
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=329.37 Aligned_cols=197 Identities=26% Similarity=0.349 Sum_probs=167.4
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC--------CcEEEEcCe-------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE--------SGIIRLCGT------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~--------~G~i~~~g~------- 422 (1156)
++++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.
T Consensus 2 l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARR---HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEEC---CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 78999999995 357999999999999999999999999999999999999998 999999883
Q ss_pred ------EEEEecCCc-CCCccHHHHhhcCCC-C----------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCC
Q 037346 423 ------KAYVAQSPW-IQSGKIEENILFGKE-M----------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLS 484 (1156)
Q Consensus 423 ------~~~v~Q~~~-~~~~ti~eni~~~~~-~----------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LS 484 (1156)
++|++|++. ++..|++||+.++.. . +.++.+++++.+++.. ..+....+||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATA-----------LVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHh-----------hhcCCcccCC
Confidence 589999985 567899999987531 1 1123455666666543 3345667999
Q ss_pred HHHHHHHHHHHhhc---------cCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEE
Q 037346 485 GGQKQRIQIARPLY---------QDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILV 551 (1156)
Q Consensus 485 gGqkqRi~lAral~---------~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~ 551 (1156)
||||||++|||||+ .+|+++||||||++||+.+.+.+.+.+.. . .++|+|++||+++.+. .||++++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999998876643 2 3789999999999886 5999999
Q ss_pred EeCCeEEEccChHHHHh
Q 037346 552 IKDGKITQAGKYSDILN 568 (1156)
Q Consensus 552 l~~G~i~~~g~~~~l~~ 568 (1156)
|++|++++.|+.+++.+
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999888764
No 307
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.6e-36 Score=289.10 Aligned_cols=192 Identities=29% Similarity=0.432 Sum_probs=168.6
Q ss_pred cEEEeeeEEEeCCC-CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------
Q 037346 357 AIEIIDGSFSWDFS-SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~-~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------- 421 (1156)
.|+++++++.-+.. .+..+|++++|.|++||.++||||||||||||+..++|+-.|++|+|.+.|
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 57888888776543 235799999999999999999999999999999999999999999999987
Q ss_pred ---eEEEEecCCcC-CCccHHHHhhcCCCC-------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 422 ---TKAYVAQSPWI-QSGKIEENILFGKEM-------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 422 ---~~~~v~Q~~~~-~~~ti~eni~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
++|+|+|...+ ++.|-.||+....+. ......+.+++.+|..-+..+| .+||||++||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP-----------~qLSGGEQQR 154 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYP-----------AQLSGGEQQR 154 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCc-----------cccCchHHHH
Confidence 37999999875 678999999875432 2345677889999988777666 5899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEeCCeEEE
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIKDGKITQ 559 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~ 559 (1156)
|+||||+...|+||+-||||.+||..+.++|.+.++. ..|.|.|+||||+.....|||++-|++|++++
T Consensus 155 VAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~ 226 (228)
T COG4181 155 VALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVE 226 (228)
T ss_pred HHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceecc
Confidence 9999999999999999999999999999999887764 56899999999999999999999999999975
No 308
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=4.1e-33 Score=326.44 Aligned_cols=259 Identities=22% Similarity=0.315 Sum_probs=218.6
Q ss_pred HhCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---CCccccccCC-----CCCCCccEE
Q 037346 288 LLGIPLESGMILSALTTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLEG---LQTDVLEKMP-----RGNSDTAIE 359 (1156)
Q Consensus 288 ~~~~~lt~~~~ft~l~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~~---~~~~~~~~~~-----~~~~~~~i~ 359 (1156)
+..|.++.|.+..+-..|+.+...++.+...+..+.+-+++..|+.+|-+.-+ .+........ ....+..|.
T Consensus 315 ~f~g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 394 (604)
T COG4178 315 YFSGQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGIT 394 (604)
T ss_pred hhcCcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeE
Confidence 46788999999999999999999999999999999999999999999974321 1110000000 011146799
Q ss_pred EeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCCCccH
Q 037346 360 IIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQSGKI 437 (1156)
Q Consensus 360 ~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~~~ti 437 (1156)
++|++..-|. +.+.+++.||++++|+.+.|.||||||||||+++|+|+.|.-+|+|.... .+.|+||.|.++.||.
T Consensus 395 ~~nl~l~~p~--~~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtL 472 (604)
T COG4178 395 LENLSLRTPD--GQTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTL 472 (604)
T ss_pred EeeeeEECCC--CCeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccH
Confidence 9999999874 45889999999999999999999999999999999999999999998863 3799999999999999
Q ss_pred HHHhhcCCC---CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcC
Q 037346 438 EENILFGKE---MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVD 514 (1156)
Q Consensus 438 ~eni~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD 514 (1156)
||-|++... ++++.+.+++.+|+|.+..+++..-++ -...||||||||+++||.++++|++++|||.|||||
T Consensus 473 re~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALD 547 (604)
T COG4178 473 REALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALD 547 (604)
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccC
Confidence 999999753 678999999999999998887654332 345799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEe
Q 037346 515 DHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIK 553 (1156)
Q Consensus 515 ~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~ 553 (1156)
+.++..+++.+.. +.+.|+|-|.|+.......++.+.+.
T Consensus 548 e~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 548 EETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred hHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 9999999987755 58999999999988877666655554
No 309
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-36 Score=308.60 Aligned_cols=200 Identities=27% Similarity=0.436 Sum_probs=176.7
Q ss_pred CeEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cc
Q 037346 946 GEVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TT 1024 (1156)
Q Consensus 946 g~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TI 1024 (1156)
+...++||++...+++-.+|.|||||||||+++++.|+++|++|+|+|||.||++++...||++||||-|..-||.. ||
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv 92 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTV 92 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhhhhhcccCCCccH
Confidence 34578888888888888899999999999999999999999999999999999999999999999999999999964 99
Q ss_pred hhccCCCC---CCC----HHHHHHHHHHcCCC--hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHH
Q 037346 1025 RSNLDPLE---EHA----DEQIWEALDKCQLG--DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDN 1088 (1156)
Q Consensus 1025 r~Nl~~~~---~~~----deei~~al~~~~l~--~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~ 1088 (1156)
.+||..-. .++ ++++.+.++.+||. +|....|..|.-+ ||||..+|+||+||||.++||+.|..
T Consensus 93 ~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~ 172 (309)
T COG1125 93 AENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRK 172 (309)
T ss_pred HHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHH
Confidence 99996422 222 46688999999997 4888888877655 89999999999999999999999999
Q ss_pred HHHHHHHHhcC--CceEEEeecCccc-ccccCEEEEEeCcEEeeecChhHHhcCCCChHH
Q 037346 1089 QIQQTLRQHFS--DCTVVTIAHRITS-VLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFA 1145 (1156)
Q Consensus 1089 ~I~~~l~~~~~--~~TvI~IaHrl~t-i~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~ 1145 (1156)
.+|+-+.+.-+ ++|+|+|||+++. ++-+|||.||++|+|+.+|+|+++++++...|-
T Consensus 173 ~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~FV 232 (309)
T COG1125 173 QLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDFV 232 (309)
T ss_pred HHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHHH
Confidence 99998876532 7899999999965 667999999999999999999999998765553
No 310
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.6e-35 Score=326.00 Aligned_cols=201 Identities=25% Similarity=0.377 Sum_probs=169.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC----CCcEEEEcC-----------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK----ESGIIRLCG----------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~----~~G~i~~~g----------- 421 (1156)
.++++|++++|. +++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~----~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 79 (254)
T PRK10418 4 QIELRNIALQAA----QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGR 79 (254)
T ss_pred EEEEeCeEEEec----cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccc
Confidence 489999999992 4699999999999999999999999999999999999999 999999987
Q ss_pred eEEEEecCCc-CCC--ccHHHHhhc-----CCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHH
Q 037346 422 TKAYVAQSPW-IQS--GKIEENILF-----GKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQI 493 (1156)
Q Consensus 422 ~~~~v~Q~~~-~~~--~ti~eni~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~l 493 (1156)
.++|++|+|. .+. .|+.+|+.+ +....++++.+.++.+++.+. .+.++..+.+||||||||++|
T Consensus 80 ~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv~l 151 (254)
T PRK10418 80 KIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRMMI 151 (254)
T ss_pred eEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHHHH
Confidence 3789999984 333 588888753 333334567777887777542 123456678999999999999
Q ss_pred HHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 494 ARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 494 Aral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
||||+.+|+++||||||++||+.+++.+.+.+.. ..|.|+|++||+++.+. .||++++|++|++++.|+.+++.+.
T Consensus 152 aral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 231 (254)
T PRK10418 152 ALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFNA 231 (254)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999999999999999888776543 24789999999999985 5999999999999999999888653
No 311
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=328.24 Aligned_cols=204 Identities=24% Similarity=0.408 Sum_probs=171.3
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC-----CcEEEEcC---------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE-----SGIIRLCG--------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~-----~G~i~~~g--------- 421 (1156)
..++++|+++.|+ +..+|+|+||++++|++++|+|+||||||||+++|+|+++|+ +|+|.++|
T Consensus 6 ~~l~~~nl~~~~~---~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYD---TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeC---CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 3689999999996 346999999999999999999999999999999999999985 79888876
Q ss_pred ------eEEEEecCCcCCCccHHHHhhcCCC---C-C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 422 ------TKAYVAQSPWIQSGKIEENILFGKE---M-D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 422 ------~~~~v~Q~~~~~~~ti~eni~~~~~---~-~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
.++|++|++.++..|++||+.++.. . . .++..++++.+++.+.+.. ..++.+.+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 2689999998888999999986421 1 1 2334556667776443321 2345678999999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeC-----CeEE
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKD-----GKIT 558 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~-----G~i~ 558 (1156)
|||++||||++++|+++||||||++||+.+.+.+.+.+.. ..++|+|++||+++.+. .||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 9999999999999999999999999999999988876643 24899999999999886 5999999999 9999
Q ss_pred EccChHHHHhc
Q 037346 559 QAGKYSDILNS 569 (1156)
Q Consensus 559 ~~g~~~~l~~~ 569 (1156)
+.|+++++.+.
T Consensus 236 ~~~~~~~~~~~ 246 (261)
T PRK14258 236 EFGLTKKIFNS 246 (261)
T ss_pred EeCCHHHHHhC
Confidence 99999988653
No 312
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.1e-35 Score=321.11 Aligned_cols=194 Identities=29% Similarity=0.414 Sum_probs=159.2
Q ss_pred cEEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC---CCCcEEEEcCe----------
Q 037346 357 AIEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP---KESGIIRLCGT---------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~---~~~G~i~~~g~---------- 422 (1156)
.++++|++|.|+..+ .+++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKC 82 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhccc
Confidence 367999999997532 3689999999999999999999999999999999999999 99999999883
Q ss_pred EEEEecCCcCCCc-cHHHHhhcCCCC------CHH----HHHH-HHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 KAYVAQSPWIQSG-KIEENILFGKEM------DRE----RYER-VLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~-ti~eni~~~~~~------~~~----~~~~-~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
++|++|++.+++. |++||+.++... ..+ +..+ .++.+++. ....+...+||||||||
T Consensus 83 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qr 151 (226)
T cd03234 83 VAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALT-----------RIGGNLVKGISGGERRR 151 (226)
T ss_pred EEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcch-----------hhhcccccCcCHHHHHH
Confidence 7999999988876 999999874211 111 1122 33333332 22234567899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCC-cc-ccCCEEEEEeCCeEEEcc
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVE-FL-PAADLILVIKDGKITQAG 561 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~-~~-~~~d~i~~l~~G~i~~~g 561 (1156)
++||||++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||++. .+ ..||++++|++|++++.|
T Consensus 152 l~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 152 VSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999999999999999999999988876643 35789999999983 55 569999999999998765
No 313
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-36 Score=310.22 Aligned_cols=200 Identities=26% Similarity=0.361 Sum_probs=172.3
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.+++++++.+|. +-.+++|+||++++||+++|+|||||||||++|+|.|+|+|++|+|.++|+
T Consensus 4 lL~v~~l~k~FG---Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~G 80 (250)
T COG0411 4 LLEVRGLSKRFG---GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLG 80 (250)
T ss_pred eeeeccceeecC---CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhcc
Confidence 467899999996 567999999999999999999999999999999999999999999999995
Q ss_pred EEEEecCCcCCCc-cHHHHhhcCCC-------------C------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCC
Q 037346 423 KAYVAQSPWIQSG-KIEENILFGKE-------------M------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGIN 482 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~-ti~eni~~~~~-------------~------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~ 482 (1156)
++--+|.+-+|.+ ||.||+..+.. + ..++..+.++.++|.+.. ++...+
T Consensus 81 i~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a-----------~~~A~~ 149 (250)
T COG0411 81 IARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELA-----------DRPAGN 149 (250)
T ss_pred ceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhh-----------cchhhc
Confidence 4788999998865 99999987621 1 123445567777776544 345568
Q ss_pred CCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEE
Q 037346 483 LSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKIT 558 (1156)
Q Consensus 483 LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~ 558 (1156)
||+|||.|+.|||||+.+|++||||||.++|.+....++.+.+.. ..|.|+++|.||++.+. .||||+||+.|+++
T Consensus 150 LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~I 229 (250)
T COG0411 150 LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVI 229 (250)
T ss_pred CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCc
Confidence 999999999999999999999999999999999999888876644 24689999999999975 59999999999999
Q ss_pred EccChHHHHhcC
Q 037346 559 QAGKYSDILNSG 570 (1156)
Q Consensus 559 ~~g~~~~l~~~~ 570 (1156)
.+|+|+++.++.
T Consensus 230 AeG~P~eV~~dp 241 (250)
T COG0411 230 AEGTPEEVRNNP 241 (250)
T ss_pred ccCCHHHHhcCH
Confidence 999999988653
No 314
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.8e-35 Score=341.23 Aligned_cols=192 Identities=26% Similarity=0.402 Sum_probs=163.9
Q ss_pred eeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------------EE
Q 037346 362 DGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------------KA 424 (1156)
Q Consensus 362 ~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------------~~ 424 (1156)
|++++|+. . .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 4 ~l~~~~~~---~-~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---F-SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---E-EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 78899952 2 35 999999999999999999999999999999999999999998772 68
Q ss_pred EEecCCcCCC-ccHHHHhhcCCCC-C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 425 YVAQSPWIQS-GKIEENILFGKEM-D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 425 ~v~Q~~~~~~-~ti~eni~~~~~~-~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
|++|++.+|. .|++||+.|+... . .++.+++++.+++.+..+ ....+||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLG-----------RLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhc-----------CChhhCCHHHHHHHHHHHHHH
Confidence 9999999886 4999999986421 1 234566777777754443 445789999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWAS 222 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcC
Confidence 99999999999999999999988876643 2 3789999999999875 5999999999999999999988754
No 315
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=324.75 Aligned_cols=209 Identities=21% Similarity=0.301 Sum_probs=171.2
Q ss_pred cEEEeeeEEEeCCC-----------------CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEE
Q 037346 357 AIEIIDGSFSWDFS-----------------SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRL 419 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~-----------------~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~ 419 (1156)
.|+++|++..|... ...++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 47788887777542 2345899999999999999999999999999999999999999999999
Q ss_pred cCeEEEEecCCcCCC-ccHHHHhhcCC---CCCHHH----HHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 420 CGTKAYVAQSPWIQS-GKIEENILFGK---EMDRER----YERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 420 ~g~~~~v~Q~~~~~~-~ti~eni~~~~---~~~~~~----~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
+|.+++++|++.+.+ .|++||+.++. ..+.+. +..+++..++.+.+ ...+.+||||||||+
T Consensus 84 ~g~~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrv 152 (264)
T PRK13546 84 NGEVSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFI-----------YQPVKKYSSGMRAKL 152 (264)
T ss_pred CCEEeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCCcccCCHHHHHHH
Confidence 999999999987764 59999997642 223222 23344444554333 345678999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHh
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
+||||++.+|++|||||||++||+.+.+.+.+.+.. ..|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 ~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (264)
T PRK13546 153 GFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYGELDDVLP 232 (264)
T ss_pred HHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEEeCCHHHHHH
Confidence 999999999999999999999999999888876643 458999999999998864 99999999999999999999887
Q ss_pred cCcchHHH
Q 037346 569 SGTDFMEL 576 (1156)
Q Consensus 569 ~~~~~~~~ 576 (1156)
...++.+.
T Consensus 233 ~~~~~~~~ 240 (264)
T PRK13546 233 KYEAFLND 240 (264)
T ss_pred HhHHHHHH
Confidence 54444433
No 316
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.7e-35 Score=327.85 Aligned_cols=208 Identities=23% Similarity=0.332 Sum_probs=170.3
Q ss_pred cEEEeeeEEEeCCC------CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------
Q 037346 357 AIEIIDGSFSWDFS------SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~------~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------- 422 (1156)
.|+++|++|.|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 48899999999631 1357999999999999999999999999999999999999999999999873
Q ss_pred --------EEEEecCCc--CC-CccHHHHhhcCC----CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCC
Q 037346 423 --------KAYVAQSPW--IQ-SGKIEENILFGK----EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINL 483 (1156)
Q Consensus 423 --------~~~v~Q~~~--~~-~~ti~eni~~~~----~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~L 483 (1156)
++|++|++. ++ ..|+.||+.+.. ..+ .++.+++++.+++... ..+..+.+|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----------~~~~~~~~L 152 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDS----------VLDKRPPQL 152 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChh----------HhhCCCccC
Confidence 689999983 33 469999986431 111 2245556666665421 123556789
Q ss_pred CHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEE
Q 037346 484 SGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQ 559 (1156)
Q Consensus 484 SgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~ 559 (1156)
|||||||++|||||+.+|+++||||||++||+.+++.+.+.+.. ..+.|+|++||+++.+. .||++++|++|++++
T Consensus 153 S~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~ 232 (268)
T PRK10419 153 SGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE 232 (268)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee
Confidence 99999999999999999999999999999999999888776543 23789999999999987 599999999999999
Q ss_pred ccChHHHHhcCcchH
Q 037346 560 AGKYSDILNSGTDFM 574 (1156)
Q Consensus 560 ~g~~~~l~~~~~~~~ 574 (1156)
.|+++++......+.
T Consensus 233 ~g~~~~~~~~~~~~~ 247 (268)
T PRK10419 233 TQPVGDKLTFSSPAG 247 (268)
T ss_pred eCChhhccCCCCHHH
Confidence 999998875444443
No 317
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2e-35 Score=319.96 Aligned_cols=189 Identities=31% Similarity=0.457 Sum_probs=161.0
Q ss_pred EEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 358 IEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
++++|+++.|+... +..+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996321 257999999999999999999999999999999999999999999999873
Q ss_pred --EEEEecCCcCCC-ccHHHHhhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHH
Q 037346 423 --KAYVAQSPWIQS-GKIEENILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRI 491 (1156)
Q Consensus 423 --~~~v~Q~~~~~~-~ti~eni~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi 491 (1156)
++|++|+|.++. .|+.||+.++.. .+ .+++.++++.+++.+.++. .+.+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDY-----------YPHNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhc-----------ChhhCCHHHHHHH
Confidence 699999998876 699999986532 22 2345667777777655543 3468999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEEeCCeE
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVIKDGKI 557 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i 557 (1156)
+||||++.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999988776533 248999999999987667999999999986
No 318
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-35 Score=323.66 Aligned_cols=204 Identities=23% Similarity=0.336 Sum_probs=169.1
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------- 421 (1156)
..+.++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 9 ~~i~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~ 85 (257)
T PRK14246 9 DVFNISRLYLYIN---DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDA 85 (257)
T ss_pred hheeeeeEEEecC---CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCH
Confidence 4699999999996 45799999999999999999999999999999999999999997776654
Q ss_pred -----eEEEEecCCcCCCc-cHHHHhhcCCC---C-CH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHH
Q 037346 422 -----TKAYVAQSPWIQSG-KIEENILFGKE---M-DR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQ 487 (1156)
Q Consensus 422 -----~~~~v~Q~~~~~~~-ti~eni~~~~~---~-~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGq 487 (1156)
.++|++|+|.++.+ |++||+.++.. . .+ ++..++++..++.+.+. ...++.+..|||||
T Consensus 86 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~ 158 (257)
T PRK14246 86 IKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVY-------DRLNSPASQLSGGQ 158 (257)
T ss_pred HHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccch-------hhhcCCcccCCHHH
Confidence 26899999988865 99999987521 1 22 22344555556543221 12345677899999
Q ss_pred HHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 488 KQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 488 kqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||++||||++.+|+++||||||++||+.+++.+.+.+.. .++.|+|++||+++.+. .||++++|++|++.+.|+.++
T Consensus 159 ~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~ 238 (257)
T PRK14246 159 QQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNE 238 (257)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999988776644 34689999999999985 599999999999999999998
Q ss_pred HHhc
Q 037346 566 ILNS 569 (1156)
Q Consensus 566 l~~~ 569 (1156)
+.+.
T Consensus 239 ~~~~ 242 (257)
T PRK14246 239 IFTS 242 (257)
T ss_pred HHhC
Confidence 8754
No 319
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-35 Score=318.09 Aligned_cols=183 Identities=30% Similarity=0.418 Sum_probs=155.4
Q ss_pred eeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-----------------eEE
Q 037346 362 DGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-----------------TKA 424 (1156)
Q Consensus 362 ~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-----------------~~~ 424 (1156)
|++++|+. ..+ |+||++++ |+++|+||||||||||+++|+|+++|++|+|.++| .++
T Consensus 5 ~l~~~~~~---~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~ 78 (214)
T cd03297 5 DIEKRLPD---FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKIG 78 (214)
T ss_pred eeeEecCC---eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcEE
Confidence 89999963 334 99999999 99999999999999999999999999999999877 268
Q ss_pred EEecCCcCCC-ccHHHHhhcCCCC-----CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 425 YVAQSPWIQS-GKIEENILFGKEM-----DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 425 ~v~Q~~~~~~-~ti~eni~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
|++|++.++. .|++||+.++... +++++.+.++.+++.... ...+.+||||||||++||||++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~ 147 (214)
T cd03297 79 LVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLL-----------NRYPAQLSGGEKQRVALARALA 147 (214)
T ss_pred EEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHh-----------hcCcccCCHHHHHHHHHHHHHh
Confidence 9999999885 5999999875321 223456667776665433 3456789999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
.+|+++||||||++||+.+++.+.+.+.. . .|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 148 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 148 AQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999988876643 2 3789999999999885 59999999999998765
No 320
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.6e-35 Score=340.67 Aligned_cols=205 Identities=23% Similarity=0.377 Sum_probs=174.1
Q ss_pred CccEEEeeeEEEeCCC--------CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe----
Q 037346 355 DTAIEIIDGSFSWDFS--------SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT---- 422 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~--------~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~---- 422 (1156)
...++++|+++.|... ....+++||||++++||+++|||+||||||||.++|+|+.+|++|+|.++|.
T Consensus 278 ~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~ 357 (539)
T COG1123 278 EPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDL 357 (539)
T ss_pred CceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCccccc
Confidence 3468899999999842 2346899999999999999999999999999999999999999999999883
Q ss_pred -----------EEEEecCCcC---CCccHHHHhhcCC----CC----CHHHHHHHHHHhCCchhhhhCCCCCccccccCC
Q 037346 423 -----------KAYVAQSPWI---QSGKIEENILFGK----EM----DRERYERVLEACSLKKDLEVLPFGDQTIIGERG 480 (1156)
Q Consensus 423 -----------~~~v~Q~~~~---~~~ti~eni~~~~----~~----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g 480 (1156)
+-+++|+|.- +..||+++|.-.. .. .+++..+.++..+|... ...+..
T Consensus 358 ~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~----------~l~ryP 427 (539)
T COG1123 358 TGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPE----------FLDRYP 427 (539)
T ss_pred ccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHH----------HHhcCc
Confidence 4689999963 4579999987432 11 12356666888888753 224556
Q ss_pred CCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCCe
Q 037346 481 INLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDGK 556 (1156)
Q Consensus 481 ~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~ 556 (1156)
.+|||||||||||||||..+|+++++|||||+||+.++..+.+.+.. .-|-|.|+||||+..++. ||+|++|++|+
T Consensus 428 ~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~ 507 (539)
T COG1123 428 HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGR 507 (539)
T ss_pred hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCe
Confidence 79999999999999999999999999999999999999999887644 458999999999999986 99999999999
Q ss_pred EEEccChHHHHhc
Q 037346 557 ITQAGKYSDILNS 569 (1156)
Q Consensus 557 i~~~g~~~~l~~~ 569 (1156)
|++.|+.+++.+.
T Consensus 508 iVE~G~~~~v~~~ 520 (539)
T COG1123 508 IVEEGPTEKVFEN 520 (539)
T ss_pred EEEeCCHHHHhcC
Confidence 9999998888865
No 321
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-35 Score=306.41 Aligned_cols=157 Identities=29% Similarity=0.520 Sum_probs=143.1
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------EEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------KAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------~~~ 425 (1156)
++++|+++.|+ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYG---KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEEC---CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEE
Confidence 46899999996 246999999999999999999999999999999999999999999999873 689
Q ss_pred EecCCcCCCc-cHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCee
Q 037346 426 VAQSPWIQSG-KIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIF 504 (1156)
Q Consensus 426 v~Q~~~~~~~-ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~il 504 (1156)
++|+|.++.+ |++||+. ||||||||++||||++.+|+++
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999988775 9999974 9999999999999999999999
Q ss_pred eeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeE
Q 037346 505 LLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKI 557 (1156)
Q Consensus 505 llDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i 557 (1156)
||||||++||+.+++.+.+.+.. .+|.|+|++||+.+.+. .||++++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 99999999999999998887644 34789999999999887 5999999999874
No 322
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.8e-36 Score=315.39 Aligned_cols=203 Identities=23% Similarity=0.362 Sum_probs=178.2
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCC---hHHHhhcCeeecccccccc-c
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIG---LHDLRTRLSIIPQDPTMFE-G 1022 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~LR~~i~~VpQdp~LF~-g 1022 (1156)
...++|||+..++++-..+.|+||||||||++++-|+-+|++|+|.+||.|+..++ +..+|++||+|+|++.|++ -
T Consensus 19 ~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssr 98 (339)
T COG1135 19 VTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSR 98 (339)
T ss_pred eeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHHHhhccEEeccccccccc
Confidence 46899999999999999999999999999999999999999999999998887776 5667789999999999997 6
Q ss_pred cchhccCCC---CCCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHH
Q 037346 1023 TTRSNLDPL---EEHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDN 1088 (1156)
Q Consensus 1023 TIr~Nl~~~---~~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~ 1088 (1156)
|+.+|+.+- ...+ .+.+.+.|+.+||.|...+-|..|.-+ ||||..+|+||+.|||||+|||+|.+
T Consensus 99 TV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~ 178 (339)
T COG1135 99 TVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQ 178 (339)
T ss_pred hHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHH
Confidence 999999752 1122 355789999999999999988888755 99999999999999999999999999
Q ss_pred HHHHHHHHhc--CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCC-hHHHHHH
Q 037346 1089 QIQQTLRQHF--SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSS-SFAQLVA 1149 (1156)
Q Consensus 1089 ~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g-~f~~l~~ 1149 (1156)
.|.+.|++.- -|-|+++|||-++.+++ ||||.||++|+|+|.|+-.++..++.. .=++++.
T Consensus 179 sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~Pk~~~t~~fi~ 243 (339)
T COG1135 179 SILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANPKHAITQEFIG 243 (339)
T ss_pred HHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCcchHHHHHHHH
Confidence 9999988653 37799999999999987 999999999999999999999988754 3334444
No 323
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-35 Score=293.80 Aligned_cols=198 Identities=27% Similarity=0.406 Sum_probs=169.0
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~ 424 (1156)
|+.+|+|++-. ++.+|++++|++++||.++|+||||+||||||+.|.|++.|++|++.++|. -+
T Consensus 2 i~a~nls~~~~---Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~ra 78 (259)
T COG4559 2 IRAENLSYSLA---GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRA 78 (259)
T ss_pred eeeeeeEEEee---cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhh
Confidence 67889998875 568999999999999999999999999999999999999999999999984 38
Q ss_pred EEecCCcC-CCccHHHHhhcCCC-C--------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 425 YVAQSPWI-QSGKIEENILFGKE-M--------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 425 ~v~Q~~~~-~~~ti~eni~~~~~-~--------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
.+||+..+ |..||+|-+.+|+- . +.+-.++++.++++...- ++...+||||+||||.||
T Consensus 79 VlpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la-----------~R~y~~LSGGEqQRVqlA 147 (259)
T COG4559 79 VLPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLA-----------GRDYRTLSGGEQQRVQLA 147 (259)
T ss_pred hcccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhh-----------ccchhhcCchHHHHHHHH
Confidence 99999865 89999999999852 1 122245667776665432 344568999999999999
Q ss_pred Hhhcc------CCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHH
Q 037346 495 RPLYQ------DADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 495 ral~~------~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|.|.+ ++++|+||||||+||...+.++++.+.. ..|..|+.|-||++... +||+|++|.+|+++..|++++
T Consensus 148 RvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~ 227 (259)
T COG4559 148 RVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQD 227 (259)
T ss_pred HHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHH
Confidence 99986 4568999999999999999988886643 56789999999999975 699999999999999999999
Q ss_pred HHhc
Q 037346 566 ILNS 569 (1156)
Q Consensus 566 l~~~ 569 (1156)
.+..
T Consensus 228 vlt~ 231 (259)
T COG4559 228 VLTD 231 (259)
T ss_pred hcCH
Confidence 8764
No 324
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=7e-35 Score=322.78 Aligned_cols=199 Identities=25% Similarity=0.366 Sum_probs=163.9
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------- 421 (1156)
.++++|+++.|+ +..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (253)
T TIGR02323 3 LLQVSGLSKSYG---GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAE 79 (253)
T ss_pred eEEEeeeEEEeC---CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHH
Confidence 589999999996 34689999999999999999999999999999999999999999999875
Q ss_pred -------eEEEEecCCcC---CCccHHHHhhcC-----CC-C--CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCC
Q 037346 422 -------TKAYVAQSPWI---QSGKIEENILFG-----KE-M--DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINL 483 (1156)
Q Consensus 422 -------~~~~v~Q~~~~---~~~ti~eni~~~-----~~-~--~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~L 483 (1156)
.++|++|+|.. +..|+.+|+.+. .. . .+++..+.++..++.. +..+..+.+|
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~L 149 (253)
T TIGR02323 80 RRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAF 149 (253)
T ss_pred HHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhc
Confidence 16899999842 345888888532 11 1 1223344455444431 2334567899
Q ss_pred CHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEE
Q 037346 484 SGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQ 559 (1156)
Q Consensus 484 SgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~ 559 (1156)
|||||||++||||++.+|+++||||||++||+.+++.+.+.+.. ..|.|+|++||+++.+. .||++++|++|++++
T Consensus 150 SgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~ 229 (253)
T TIGR02323 150 SGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVE 229 (253)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999988876643 24789999999999987 599999999999999
Q ss_pred ccChHHHHh
Q 037346 560 AGKYSDILN 568 (1156)
Q Consensus 560 ~g~~~~l~~ 568 (1156)
.|+++++..
T Consensus 230 ~~~~~~~~~ 238 (253)
T TIGR02323 230 SGLTDQVLD 238 (253)
T ss_pred ECCHHHHhc
Confidence 999888764
No 325
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=4.5e-35 Score=310.06 Aligned_cols=172 Identities=25% Similarity=0.415 Sum_probs=149.9
Q ss_pred cEEEeeeEEEeCCC---CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCC--CCCCcEEEEcCe---------
Q 037346 357 AIEIIDGSFSWDFS---SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGV--PKESGIIRLCGT--------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~---~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~--~~~~G~i~~~g~--------- 422 (1156)
.++++|++|.|+.. .++++|+|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 82 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDKRSFRK 82 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCchHhhhh
Confidence 48899999999731 0257999999999999999999999999999999999999 999999999873
Q ss_pred -EEEEecCCcCCC-ccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 423 -KAYVAQSPWIQS-GKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 423 -~~~v~Q~~~~~~-~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
++|++|++.++. .|++||+.++... ..||||||||++||||++.+
T Consensus 83 ~i~~~~q~~~~~~~~t~~~~i~~~~~~---------------------------------~~LS~G~~qrv~laral~~~ 129 (194)
T cd03213 83 IIGYVPQDDILHPTLTVRETLMFAAKL---------------------------------RGLSGGERKRVSIALELVSN 129 (194)
T ss_pred eEEEccCcccCCCCCcHHHHHHHHHHh---------------------------------ccCCHHHHHHHHHHHHHHcC
Confidence 689999998876 5999999653210 07999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCC-ccc-cCCEEEEEeCCeEEEcc
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVE-FLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~-~~~-~~d~i~~l~~G~i~~~g 561 (1156)
|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++ .+. .||++++|++|++.+.|
T Consensus 130 p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 130 PSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 999999999999999999988876644 35899999999997 454 59999999999998654
No 326
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-35 Score=315.70 Aligned_cols=203 Identities=25% Similarity=0.392 Sum_probs=167.4
Q ss_pred EEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-C----CCcEEEEcCe---------
Q 037346 358 IEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-K----ESGIIRLCGT--------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-~----~~G~i~~~g~--------- 422 (1156)
++++|++..|.... ...+++|+||++++||++||||+|||||||+.++|+|+++ | .+|+|.++|+
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999887533 3579999999999999999999999999999999999998 3 5789999883
Q ss_pred --------EEEEecCCcC-CC--ccHHHHh----hcCCCC-----CHHHHHHHHHHhCCchh---hhhCCCCCccccccC
Q 037346 423 --------KAYVAQSPWI-QS--GKIEENI----LFGKEM-----DRERYERVLEACSLKKD---LEVLPFGDQTIIGER 479 (1156)
Q Consensus 423 --------~~~v~Q~~~~-~~--~ti~eni----~~~~~~-----~~~~~~~~~~~~~l~~~---~~~~~~g~~t~v~~~ 479 (1156)
|+|++|+|.. +| .||.+-+ ...... ..++..+.++..++.+. ++..|
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YP---------- 151 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYP---------- 151 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCC----------
Confidence 7999999852 33 3555444 322211 13456677888888653 34444
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCC
Q 037346 480 GINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDG 555 (1156)
Q Consensus 480 g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G 555 (1156)
.+|||||||||.||-||..+|+++|.||||+|||..++.+|.+.+.. ..|.|+|+||||+..+.. ||+|+||..|
T Consensus 152 -helSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG 230 (316)
T COG0444 152 -HELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAG 230 (316)
T ss_pred -cccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECc
Confidence 69999999999999999999999999999999999999999886643 468999999999999864 9999999999
Q ss_pred eEEEccChHHHHhcCc
Q 037346 556 KITQAGKYSDILNSGT 571 (1156)
Q Consensus 556 ~i~~~g~~~~l~~~~~ 571 (1156)
+|+|.|+.+++++...
T Consensus 231 ~iVE~g~~~~i~~~P~ 246 (316)
T COG0444 231 RIVEEGPVEEIFKNPK 246 (316)
T ss_pred EEEEeCCHHHHhcCCC
Confidence 9999999999987543
No 327
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-35 Score=337.96 Aligned_cols=203 Identities=21% Similarity=0.253 Sum_probs=170.4
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCeEEEEecCCcCCC-
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGTKAYVAQSPWIQS- 434 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~~~~v~Q~~~~~~- 434 (1156)
..++++|++|.|+....+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|...++.+.+.++.
T Consensus 20 ~mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~~i~~~~~l~~~ 99 (549)
T PRK13545 20 PFDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAALIAISSGLNGQ 99 (549)
T ss_pred ceeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEeeeEEeccccCCC
Confidence 3588999999997543357999999999999999999999999999999999999999999999998766666665544
Q ss_pred ccHHHHhhcCC---CCCHH----HHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeee
Q 037346 435 GKIEENILFGK---EMDRE----RYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLD 507 (1156)
Q Consensus 435 ~ti~eni~~~~---~~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlD 507 (1156)
.|++||+.++. ..+.+ +..++++.+++.+.+. ..+.+||||||||++|||||+.+|+++|||
T Consensus 100 lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~ld-----------~~~~~LSGGQrQRVaLArAL~~~P~LLLLD 168 (549)
T PRK13545 100 LTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFIY-----------QPVKTYSSGMKSRLGFAISVHINPDILVID 168 (549)
T ss_pred CcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHhh-----------CCcccCCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 59999998642 12222 3445667777755443 345789999999999999999999999999
Q ss_pred CCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 508 DPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 508 ep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|||++||+.+++.+++.+.. ..|+|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 169 EPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~ 233 (549)
T PRK13545 169 EALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDH 233 (549)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhh
Confidence 99999999999988876643 35889999999999886 4999999999999999999988754
No 328
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-35 Score=311.05 Aligned_cols=178 Identities=24% Similarity=0.271 Sum_probs=150.0
Q ss_pred cEEEeeeEEEeCCC-CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC---CCCcEEEEcCe----------
Q 037346 357 AIEIIDGSFSWDFS-SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP---KESGIIRLCGT---------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~-~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~---~~~G~i~~~g~---------- 422 (1156)
.+.++|++|.|+.. +++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~ 82 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYP 82 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhc
Confidence 37899999999854 35679999999999999999999999999999999999999 89999999883
Q ss_pred --EEEEecCCcCCC-ccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhcc
Q 037346 423 --KAYVAQSPWIQS-GKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQ 499 (1156)
Q Consensus 423 --~~~v~Q~~~~~~-~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~ 499 (1156)
++|++|++.++. .|++||+.++.... ..+....||||||||++||||+++
T Consensus 83 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---------------------------~~~~~~~LS~Ge~qrl~laral~~ 135 (202)
T cd03233 83 GEIIYVSEEDVHFPTLTVRETLDFALRCK---------------------------GNEFVRGISGGERKRVSIAEALVS 135 (202)
T ss_pred ceEEEEecccccCCCCcHHHHHhhhhhhc---------------------------cccchhhCCHHHHHHHHHHHHHhh
Confidence 689999998776 59999998753210 123456899999999999999999
Q ss_pred CCCeeeeeCCCCCcCHHHHHHHHHHHHh--cC-CCEEEEEccC-CCcc-ccCCEEEEEeCCeEEEcc
Q 037346 500 DADIFLLDDPFSPVDDHTGAHLFKFCWV--SS-SKTVIYATHQ-VEFL-PAADLILVIKDGKITQAG 561 (1156)
Q Consensus 500 ~~~illlDep~s~lD~~~~~~i~~~~~~--~~-~~tvi~vtH~-~~~~-~~~d~i~~l~~G~i~~~g 561 (1156)
+|+++||||||++||+.+++.+.+.+.. .+ +.|+|+++|+ .+.+ ..||++++|++|++++.|
T Consensus 136 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 136 RASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999999988876644 22 5676766554 5665 469999999999998754
No 329
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-35 Score=309.07 Aligned_cols=172 Identities=25% Similarity=0.357 Sum_probs=149.5
Q ss_pred cEEEeeeEEEeCCCC-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCC--CCCCcEEEEcC---------eEE
Q 037346 357 AIEIIDGSFSWDFSS-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGV--PKESGIIRLCG---------TKA 424 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~--~~~~G~i~~~g---------~~~ 424 (1156)
.++++|+++.|+... ++++|+|+||++++||+++|+||||||||||+++|+|.+ +|++|+|.++| .++
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~~~~~~~i~ 82 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLDKNFQRSTG 82 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehHHHhhhceE
Confidence 488999999996321 257999999999999999999999999999999999986 48999999987 368
Q ss_pred EEecCCcCCC-ccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCe
Q 037346 425 YVAQSPWIQS-GKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADI 503 (1156)
Q Consensus 425 ~v~Q~~~~~~-~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~i 503 (1156)
|++|++.++. .|++||+.++.. ++ +||||||||++||||++.+|++
T Consensus 83 ~~~q~~~~~~~~tv~~~l~~~~~---------~~------------------------~LSgGe~qrv~la~al~~~p~v 129 (192)
T cd03232 83 YVEQQDVHSPNLTVREALRFSAL---------LR------------------------GLSVEQRKRLTIGVELAAKPSI 129 (192)
T ss_pred EecccCccccCCcHHHHHHHHHH---------Hh------------------------cCCHHHhHHHHHHHHHhcCCcE
Confidence 9999998776 499999986420 00 7999999999999999999999
Q ss_pred eeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCc-c-ccCCEEEEEeC-CeEEEcc
Q 037346 504 FLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEF-L-PAADLILVIKD-GKITQAG 561 (1156)
Q Consensus 504 lllDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~-~-~~~d~i~~l~~-G~i~~~g 561 (1156)
+||||||++||+.+++.+.+.+.. .+++|+|++||+++. + ..||+|++|++ |++++.|
T Consensus 130 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 130 LFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999998876644 348999999999984 4 56999999999 9998765
No 330
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=285.53 Aligned_cols=176 Identities=28% Similarity=0.439 Sum_probs=156.7
Q ss_pred CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EEEEecCCcCCCccHH
Q 037346 372 PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KAYVAQSPWIQSGKIE 438 (1156)
Q Consensus 372 ~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~~v~Q~~~~~~~ti~ 438 (1156)
+.++|+++||++.+||.++|+||||||||||++.++-+.+|++|++.+.|. ++||.|.|.+|.+||.
T Consensus 15 ~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tVe 94 (223)
T COG4619 15 DAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTVE 94 (223)
T ss_pred CCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccchh
Confidence 568999999999999999999999999999999999999999999999984 6899999999999999
Q ss_pred HHhhcC-----CCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCc
Q 037346 439 ENILFG-----KEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPV 513 (1156)
Q Consensus 439 eni~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~l 513 (1156)
||+.|. +..|+......++.+++.+ +.+..+..+||||+|||++|+|-|.--|+|||||||||||
T Consensus 95 DNlifP~~~r~rr~dr~aa~~llar~~l~~----------~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsAL 164 (223)
T COG4619 95 DNLIFPWQIRNRRPDRAAALDLLARFALPD----------SILTKNITELSGGEKQRIALIRNLQFMPKILLLDEITSAL 164 (223)
T ss_pred hccccchHHhccCCChHHHHHHHHHcCCch----------hhhcchhhhccchHHHHHHHHHHhhcCCceEEecCchhhc
Confidence 999996 3456777777777777644 3455677899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHh---cCCCEEEEEccCCCc-cccCCEEEEEeCCeE
Q 037346 514 DDHTGAHLFKFCWV---SSSKTVIYATHQVEF-LPAADLILVIKDGKI 557 (1156)
Q Consensus 514 D~~~~~~i~~~~~~---~~~~tvi~vtH~~~~-~~~~d~i~~l~~G~i 557 (1156)
|+.+++.|-+.+.+ .++..++.|||+.+. ++.+|+++-+..|++
T Consensus 165 D~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~ 212 (223)
T COG4619 165 DESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHA 212 (223)
T ss_pred ChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcc
Confidence 99999988665544 467899999999987 788999999999876
No 331
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=8.4e-35 Score=322.26 Aligned_cols=202 Identities=46% Similarity=0.747 Sum_probs=181.7
Q ss_pred EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhcc
Q 037346 949 NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNL 1028 (1156)
Q Consensus 949 ~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl 1028 (1156)
.++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.+++++|+|.+|++|+++|+
T Consensus 36 il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~i~~v~q~~~l~~~tv~~nl 115 (257)
T cd03288 36 VLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNL 115 (257)
T ss_pred ceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhhEEEECCCCcccccHHHHhc
Confidence 45555555566666778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHHHHH
Q 037346 1029 DPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATDNQI 1090 (1156)
Q Consensus 1029 ~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te~~I 1090 (1156)
.+.....+++++++++.+++.+.+..+|.|+++. ||||+++|++|||||||++||+++.+.+
T Consensus 116 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l 195 (257)
T cd03288 116 DPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENIL 195 (257)
T ss_pred CcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHH
Confidence 8754445677889999999999998888766642 8999999999999999999999999999
Q ss_pred HHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHH
Q 037346 1091 QQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAE 1150 (1156)
Q Consensus 1091 ~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~ 1150 (1156)
.+.+++..+++|+|++||+++.+..||+|++|++|+|++.|+++++.+..++.|+.++..
T Consensus 196 ~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 196 QKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred HHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 999998777899999999999999999999999999999999999998777889988764
No 332
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-35 Score=302.15 Aligned_cols=157 Identities=42% Similarity=0.632 Sum_probs=143.1
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~ 424 (1156)
++++|+++.|+.. ..++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (171)
T cd03228 1 IEFKNVSFSYPGR-PKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIA 79 (171)
T ss_pred CEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEE
Confidence 4689999999632 236999999999999999999999999999999999999999999999883 68
Q ss_pred EEecCCcCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCee
Q 037346 425 YVAQSPWIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIF 504 (1156)
Q Consensus 425 ~v~Q~~~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~il 504 (1156)
|++|+|.+++.|+.||+ ||||||||++||||++.+|+++
T Consensus 80 ~~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~ll 118 (171)
T cd03228 80 YVPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPIL 118 (171)
T ss_pred EEcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999888999997 9999999999999999999999
Q ss_pred eeeCCCCCcCHHHHHHHHHHHHh-cCCCEEEEEccCCCccccCCEEEEEeCCe
Q 037346 505 LLDDPFSPVDDHTGAHLFKFCWV-SSSKTVIYATHQVEFLPAADLILVIKDGK 556 (1156)
Q Consensus 505 llDep~s~lD~~~~~~i~~~~~~-~~~~tvi~vtH~~~~~~~~d~i~~l~~G~ 556 (1156)
||||||++||+.+...+.+.+.. .+++|+|++||+++.+..||++++|++|+
T Consensus 119 llDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 119 ILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 99999999999999988876644 34689999999999987799999999884
No 333
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-35 Score=304.94 Aligned_cols=158 Identities=35% Similarity=0.497 Sum_probs=142.9
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------------e
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG---------------T 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g---------------~ 422 (1156)
++++|++++|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 1 i~~~~l~~~~~---~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (178)
T cd03229 1 LELKNVSKRYG---QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRR 77 (178)
T ss_pred CEEEEEEEEEC---CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhc
Confidence 46899999996 35799999999999999999999999999999999999999999999877 2
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCC
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDA 501 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~ 501 (1156)
++|++|+|.++. .|++||+.+. ||||||||++||||++++|
T Consensus 78 i~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p 119 (178)
T cd03229 78 IGMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDP 119 (178)
T ss_pred EEEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCC
Confidence 689999998775 5999998764 9999999999999999999
Q ss_pred CeeeeeCCCCCcCHHHHHHHHHHHHh--cC-CCEEEEEccCCCccc-cCCEEEEEeCCe
Q 037346 502 DIFLLDDPFSPVDDHTGAHLFKFCWV--SS-SKTVIYATHQVEFLP-AADLILVIKDGK 556 (1156)
Q Consensus 502 ~illlDep~s~lD~~~~~~i~~~~~~--~~-~~tvi~vtH~~~~~~-~~d~i~~l~~G~ 556 (1156)
+++||||||++||+.++..+.+.+.. .+ ++|+|++||+++.+. .||++++|++|+
T Consensus 120 ~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 120 DVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 99999999999999999998876644 33 789999999999987 599999999884
No 334
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=5.2e-35 Score=313.69 Aligned_cols=179 Identities=28% Similarity=0.413 Sum_probs=152.0
Q ss_pred EeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------------
Q 037346 360 IIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT----------------- 422 (1156)
Q Consensus 360 ~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~----------------- 422 (1156)
++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 1 i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 77 (206)
T TIGR03608 1 LKNISKKFG---DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREK 77 (206)
T ss_pred CcceEEEEC---CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhC
Confidence 468999996 357999999999999999999999999999999999999999999998762
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCCC---C----CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGKE---M----DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~~---~----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
++|++|++.++. .|++||+.++.. . ..++++++++..++.+.. +....+||||||||++||
T Consensus 78 i~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~lS~G~~qr~~la 146 (206)
T TIGR03608 78 LGYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKL-----------KQKIYELSGGEQQRVALA 146 (206)
T ss_pred eeEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhh-----------cCChhhCCHHHHHHHHHH
Confidence 689999998876 699999987421 1 134456677777765433 344578999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEEEE
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLILVI 552 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l 552 (1156)
|||+++|+++||||||++||+.+.+.+.+.+.. ..++|+|++||+++.+..||+|++|
T Consensus 147 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 147 RAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 999999999999999999999999998876644 3488999999999877779999875
No 335
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=9.5e-35 Score=316.35 Aligned_cols=180 Identities=28% Similarity=0.416 Sum_probs=152.4
Q ss_pred cccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------EEEEecCCcCCC-ccHHHHhhcCC-
Q 037346 376 LRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------KAYVAQSPWIQS-GKIEENILFGK- 445 (1156)
Q Consensus 376 l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------~~~v~Q~~~~~~-~ti~eni~~~~- 445 (1156)
|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. .+|++|++.++. .|++||+.++.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~l~~~~tv~e~l~~~~~ 80 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYSLLPWLTVRENIALAVD 80 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcccCCCCCHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999984 389999998876 59999998641
Q ss_pred ----CCCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHH
Q 037346 446 ----EMDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHT 517 (1156)
Q Consensus 446 ----~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~ 517 (1156)
..++ ++..+.++.+++.+..+ ....+||||||||++|||||+.+|+++||||||++||+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~ 149 (230)
T TIGR01184 81 RVLPDLSKSERRAIVEEHIALVGLTEAAD-----------KRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALT 149 (230)
T ss_pred hcccCCCHHHHHHHHHHHHHHcCCHHHHc-----------CChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHH
Confidence 1222 23456677777754333 3456899999999999999999999999999999999999
Q ss_pred HHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHH
Q 037346 518 GAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 518 ~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
++.+.+.+.. . .|+|+|++||+++.+. .||+|++|++|++++.|+..++
T Consensus 150 ~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 202 (230)
T TIGR01184 150 RGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEV 202 (230)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceec
Confidence 9998876643 2 4789999999999875 5999999999999988865443
No 336
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=2.6e-34 Score=318.13 Aligned_cols=196 Identities=24% Similarity=0.282 Sum_probs=162.1
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCC--CCCCCcEEEEcCe------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGG--VPKESGIIRLCGT------------ 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~--~~~~~G~i~~~g~------------ 422 (1156)
.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+ ++|++|+|.++|.
T Consensus 7 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (252)
T CHL00131 7 ILEIKNLHASVN---ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAH 83 (252)
T ss_pred eEEEEeEEEEeC---CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhe
Confidence 599999999996 34699999999999999999999999999999999998 6899999999872
Q ss_pred --EEEEecCCcCCCc-cHHHHhhcCCC----------CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCC-CCC
Q 037346 423 --KAYVAQSPWIQSG-KIEENILFGKE----------MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGI-NLS 484 (1156)
Q Consensus 423 --~~~v~Q~~~~~~~-ti~eni~~~~~----------~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~-~LS 484 (1156)
++|++|++.++.+ |+.+|+.++.. .+ .+++.++++.+++.+. ..+.... .||
T Consensus 84 ~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~~LS 153 (252)
T CHL00131 84 LGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPS----------FLSRNVNEGFS 153 (252)
T ss_pred eeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchh----------hhccccccCCC
Confidence 5789999988765 89999875421 01 1233455666666421 1223333 599
Q ss_pred HHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc--CCEEEEEeCCeEEEc
Q 037346 485 GGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA--ADLILVIKDGKITQA 560 (1156)
Q Consensus 485 gGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~--~d~i~~l~~G~i~~~ 560 (1156)
||||||++||||++.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+.. ||++++|++|++++.
T Consensus 154 gG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~ 233 (252)
T CHL00131 154 GGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKT 233 (252)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEe
Confidence 9999999999999999999999999999999999998876643 358999999999998864 899999999999999
Q ss_pred cChHH
Q 037346 561 GKYSD 565 (1156)
Q Consensus 561 g~~~~ 565 (1156)
|+++.
T Consensus 234 ~~~~~ 238 (252)
T CHL00131 234 GDAEL 238 (252)
T ss_pred cChhh
Confidence 98873
No 337
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=8.6e-35 Score=304.97 Aligned_cols=158 Identities=30% Similarity=0.483 Sum_probs=142.3
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------e
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--------------T 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--------------~ 422 (1156)
.++++|++++| +|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~-------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (182)
T cd03215 4 VLEVRGLSVKG-------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAG 76 (182)
T ss_pred EEEEeccEEEe-------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCC
Confidence 58999999987 79999999999999999999999999999999999999999999987 3
Q ss_pred EEEEecCC----cCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 423 KAYVAQSP----WIQSGKIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 423 ~~~v~Q~~----~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
++|++|++ ..+..|++||+.++.. ||||||||++||||++
T Consensus 77 i~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~ 120 (182)
T cd03215 77 IAYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLA 120 (182)
T ss_pred eEEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHc
Confidence 68999985 3445799999976421 9999999999999999
Q ss_pred cCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeE
Q 037346 499 QDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKI 557 (1156)
Q Consensus 499 ~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i 557 (1156)
.+|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+.. ||++++|++|++
T Consensus 121 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 121 RDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred cCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999998876643 357899999999988865 999999999974
No 338
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.9e-34 Score=309.13 Aligned_cols=185 Identities=23% Similarity=0.316 Sum_probs=156.2
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe----------EEE
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT----------KAY 425 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~----------~~~ 425 (1156)
..++++|++++|+ ++++++++||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 10 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~ 86 (214)
T PRK13543 10 PLLAAHALAFSRN---EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAY 86 (214)
T ss_pred ceEEEeeEEEecC---CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEE
Confidence 4699999999996 346999999999999999999999999999999999999999999999983 799
Q ss_pred EecCCcCCCc-cHHHHhhcCCC----CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 426 VAQSPWIQSG-KIEENILFGKE----MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 426 v~Q~~~~~~~-ti~eni~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
++|++.++.. |++||+.++.. ..+++.++.++..++.+.. .....+||||||||++||||++.+
T Consensus 87 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~laral~~~ 155 (214)
T PRK13543 87 LGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYE-----------DTLVRQLSAGQKKRLALARLWLSP 155 (214)
T ss_pred eecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhhc-----------cCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999988765 99999976422 1233445566666654322 344578999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeC
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKD 554 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~ 554 (1156)
|+++||||||++||+..++.+.+.+.. .+++|+|++||+++.+. .||++++++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 156 APLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999988776533 45789999999999986 5999999863
No 339
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=1.4e-34 Score=313.61 Aligned_cols=190 Identities=24% Similarity=0.306 Sum_probs=154.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCeEEEEec-CCcC-CCc
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGTKAYVAQ-SPWI-QSG 435 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~~~~v~Q-~~~~-~~~ 435 (1156)
+.++|++..|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+..+..+ .+.+ ++.
T Consensus 23 l~~~~~~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 99 (224)
T cd03220 23 LGILGRKGEVG---EFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLLGLGGGFNPEL 99 (224)
T ss_pred hhhhhhhhhcC---CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhhcccccCCCCC
Confidence 56778888885 457999999999999999999999999999999999999999999999997655433 2333 356
Q ss_pred cHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeC
Q 037346 436 KIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDD 508 (1156)
Q Consensus 436 ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDe 508 (1156)
|++||+.++.. .+. ++..++++..++.+.+ .....+||||||||++||||++++|+++||||
T Consensus 100 tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~laral~~~p~llllDE 168 (224)
T cd03220 100 TGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFI-----------DLPVKTYSSGMKARLAFAIATALEPDILLIDE 168 (224)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999986532 121 2344455555554333 23446899999999999999999999999999
Q ss_pred CCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 509 PFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 509 p~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 169 P~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 169 VLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999988876643 35789999999999876 59999999999998765
No 340
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=4.5e-34 Score=304.56 Aligned_cols=181 Identities=25% Similarity=0.318 Sum_probs=155.5
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------eEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------TKAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------~~~~ 425 (1156)
++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++|
T Consensus 1 l~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERD---GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeC---CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEE
Confidence 46899999996 35799999999999999999999999999999999999999999999987 3689
Q ss_pred EecCCcCC-CccHHHHhhcCCC-CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCe
Q 037346 426 VAQSPWIQ-SGKIEENILFGKE-MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADI 503 (1156)
Q Consensus 426 v~Q~~~~~-~~ti~eni~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~i 503 (1156)
++|++.++ ..|++||+.+... .++++.+++++..++.+... ....+||||||||++||||++.+|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFED-----------RPVAQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhhc-----------CchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99998775 5799999987643 34567788888888864332 33568999999999999999999999
Q ss_pred eeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEE
Q 037346 504 FLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVI 552 (1156)
Q Consensus 504 lllDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l 552 (1156)
+||||||++||+.+++++.+.+.. .+|+|+|++||+...+. .+++++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 999999999999999998876643 35889999999987654 68998876
No 341
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.9e-34 Score=315.22 Aligned_cols=179 Identities=24% Similarity=0.342 Sum_probs=148.2
Q ss_pred CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------EEEEe-cCCcCC-CccH
Q 037346 372 PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------KAYVA-QSPWIQ-SGKI 437 (1156)
Q Consensus 372 ~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------~~~v~-Q~~~~~-~~ti 437 (1156)
++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++|++ |++.++ ..|+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCCCCcH
Confidence 357999999999999999999999999999999999999999999999873 68997 556665 5699
Q ss_pred HHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCC
Q 037346 438 EENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPF 510 (1156)
Q Consensus 438 ~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~ 510 (1156)
+||+.+... .+. ++..++++.+++.+.. .....+||||||||++||||++.+|+++||||||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELL-----------DTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 999976421 222 2334456666664333 2344689999999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 511 SPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 511 s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
++||+.+.+++.+.+.. ..++|+|++||+++.+. .||++++|++|++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999886644 23789999999999876 49999999999998754
No 342
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=355.52 Aligned_cols=203 Identities=19% Similarity=0.334 Sum_probs=171.1
Q ss_pred ccEEEeeeEEEeCCCC--------CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----
Q 037346 356 TAIEIIDGSFSWDFSS--------PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT----- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~--------~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~----- 422 (1156)
..++++|+++.|+... ...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 312 ~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~ 391 (623)
T PRK10261 312 PILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTL 391 (623)
T ss_pred ceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcC
Confidence 4699999999996311 246899999999999999999999999999999999999999999999872
Q ss_pred -----------EEEEecCCc--CC-CccHHHHhhcCC---CC-C----HHHHHHHHHHhCCch-hhhhCCCCCccccccC
Q 037346 423 -----------KAYVAQSPW--IQ-SGKIEENILFGK---EM-D----RERYERVLEACSLKK-DLEVLPFGDQTIIGER 479 (1156)
Q Consensus 423 -----------~~~v~Q~~~--~~-~~ti~eni~~~~---~~-~----~~~~~~~~~~~~l~~-~~~~~~~g~~t~v~~~ 479 (1156)
++|++|+|. ++ ..||.||+.++. .. . .++..++++.++|.. ..+ ..
T Consensus 392 ~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~-----------~~ 460 (623)
T PRK10261 392 SPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAW-----------RY 460 (623)
T ss_pred CHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhh-----------CC
Confidence 799999983 44 469999997632 11 1 235566778888753 333 34
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCC
Q 037346 480 GINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDG 555 (1156)
Q Consensus 480 g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G 555 (1156)
..+|||||||||+|||||+.+|++|||||||++||+.++..+++.+.. ..|.|+|+|||+++.+. .||+|++|++|
T Consensus 461 ~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G 540 (623)
T PRK10261 461 PHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLG 540 (623)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 468999999999999999999999999999999999999999886643 24789999999999986 59999999999
Q ss_pred eEEEccChHHHHhc
Q 037346 556 KITQAGKYSDILNS 569 (1156)
Q Consensus 556 ~i~~~g~~~~l~~~ 569 (1156)
++++.|+.+++...
T Consensus 541 ~iv~~g~~~~i~~~ 554 (623)
T PRK10261 541 QIVEIGPRRAVFEN 554 (623)
T ss_pred EEEEecCHHHHhcC
Confidence 99999999998754
No 343
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-35 Score=290.50 Aligned_cols=198 Identities=29% Similarity=0.414 Sum_probs=171.8
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KA 424 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~ 424 (1156)
|+++|++++|. ++.+++|+|++|++|.+++++||||+||||||..+.+++++++|+|.++|. ++
T Consensus 2 I~i~nv~K~y~---~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~lS 78 (252)
T COG4604 2 ITIENVSKSYG---TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKKLS 78 (252)
T ss_pred eeehhhhHhhC---CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHHHH
Confidence 78899999996 568999999999999999999999999999999999999999999999995 35
Q ss_pred EEecCCcCC-CccHHHHhhcCC-CC--------CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 425 YVAQSPWIQ-SGKIEENILFGK-EM--------DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 425 ~v~Q~~~~~-~~ti~eni~~~~-~~--------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
..-|+..+. .-||+|-+.||+ |+ |+..++++++...|.+.-+ +.-.+||||||||.-+|
T Consensus 79 ILkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~d-----------ryLd~LSGGQrQRAfIA 147 (252)
T COG4604 79 ILKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSD-----------RYLDELSGGQRQRAFIA 147 (252)
T ss_pred HHHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchHH-----------HhHHhcccchhhhhhhh
Confidence 677777654 459999999996 33 4556778888877765332 22357999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
..++++.|.++||||+++||......+++.+.+ .-|||+|+|-||..+.. ++|+|+.|++|+++.+|+++++++.
T Consensus 148 MVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii~~ 226 (252)
T COG4604 148 MVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEIIQP 226 (252)
T ss_pred eeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEEecCCHHHhcCH
Confidence 999999999999999999999988888776543 45899999999999987 5999999999999999999999864
No 344
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.7e-34 Score=313.17 Aligned_cols=187 Identities=27% Similarity=0.381 Sum_probs=155.8
Q ss_pred ccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC----CCcEEEEcC-----------eEEEEecCCc-CC-C-cc
Q 037346 375 TLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK----ESGIIRLCG-----------TKAYVAQSPW-IQ-S-GK 436 (1156)
Q Consensus 375 ~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~----~~G~i~~~g-----------~~~~v~Q~~~-~~-~-~t 436 (1156)
+++|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++| .++|++|+|. .+ . .|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 57899999999999999999999999999999999999 899999987 3799999995 33 3 59
Q ss_pred HHHHhhcCC-----CC--CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCC
Q 037346 437 IEENILFGK-----EM--DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDP 509 (1156)
Q Consensus 437 i~eni~~~~-----~~--~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep 509 (1156)
+.+|+.+.. .. ..+++.++++.+++.+. .+.....+.+||||||||++||||++++|+++|||||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGKLSKQARALILEALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 999986532 11 12345667777777521 1223456678999999999999999999999999999
Q ss_pred CCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 510 FSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 510 ~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|++||+.+.+.+.+.+.. . .++|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 216 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYN 216 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999988876643 2 3789999999999886 5999999999999999999888643
No 345
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=4.1e-34 Score=314.89 Aligned_cols=191 Identities=26% Similarity=0.404 Sum_probs=159.7
Q ss_pred EEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------EEE
Q 037346 359 EIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------KAY 425 (1156)
Q Consensus 359 ~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------~~~ 425 (1156)
+++|+++. .+|+|+||++++|++++|+||||||||||+++|+|.+++ +|+|.++|. ++|
T Consensus 2 ~~~~l~~~-------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~~ 73 (248)
T PRK03695 2 QLNDVAVS-------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRAY 73 (248)
T ss_pred cccccchh-------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheEE
Confidence 46677764 279999999999999999999999999999999999865 999999883 689
Q ss_pred EecCCc-CCCccHHHHhhcCCCC--C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhc
Q 037346 426 VAQSPW-IQSGKIEENILFGKEM--D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLY 498 (1156)
Q Consensus 426 v~Q~~~-~~~~ti~eni~~~~~~--~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~ 498 (1156)
++|++. .+..|+++|+.++... + .++.+++++.+++.+.. ...+..||||||||++||||++
T Consensus 74 v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~ 142 (248)
T PRK03695 74 LSQQQTPPFAMPVFQYLTLHQPDKTRTEAVASALNEVAEALGLDDKL-----------GRSVNQLSGGEWQRVRLAAVVL 142 (248)
T ss_pred ecccCccCCCccHHHHHHhcCccCCCcHHHHHHHHHHHHHcCCHhHh-----------cCCcccCCHHHHHHHHHHHHHh
Confidence 999985 4567999999986321 1 23456677777775433 2445789999999999999999
Q ss_pred c-------CCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 499 Q-------DADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 499 ~-------~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
. +|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 143 ~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 143 QVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred ccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 8 6799999999999999999988876643 35789999999999775 699999999999999999888754
No 346
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=3.5e-34 Score=305.01 Aligned_cols=168 Identities=29% Similarity=0.343 Sum_probs=146.8
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCC--CCCCCcEEEEcCe-------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGG--VPKESGIIRLCGT------------- 422 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~--~~~~~G~i~~~g~------------- 422 (1156)
++++|++++|+ ++++++|+||++++||+++|+|+||||||||+++|+|+ ++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (200)
T cd03217 1 LEIKDLHVSVG---GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARL 77 (200)
T ss_pred CeEEEEEEEeC---CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhC
Confidence 46899999996 34799999999999999999999999999999999999 5899999999872
Q ss_pred -EEEEecCCcCCCc-cHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 423 -KAYVAQSPWIQSG-KIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 423 -~~~v~Q~~~~~~~-ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
++|++|+|.++++ ++++|+ . ....+||||||||++||||++.+
T Consensus 78 ~i~~v~q~~~~~~~~~~~~~l------------------------~-----------~~~~~LS~G~~qrv~laral~~~ 122 (200)
T cd03217 78 GIFLAFQYPPEIPGVKNADFL------------------------R-----------YVNEGFSGGEKKRNEILQLLLLE 122 (200)
T ss_pred cEEEeecChhhccCccHHHHH------------------------h-----------hccccCCHHHHHHHHHHHHHhcC
Confidence 7899999988765 565554 0 01147999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc--cCCEEEEEeCCeEEEccCh
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP--AADLILVIKDGKITQAGKY 563 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~--~~d~i~~l~~G~i~~~g~~ 563 (1156)
|+++||||||++||+.+.+.+.+.+.. .+++|+|++||+++.+. .||++++|++|++.+.|+.
T Consensus 123 p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~~~ 189 (200)
T cd03217 123 PDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSGDK 189 (200)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEccH
Confidence 999999999999999999988876644 34789999999999887 6999999999999999843
No 347
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.2e-34 Score=305.65 Aligned_cols=181 Identities=24% Similarity=0.289 Sum_probs=155.2
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------EEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------KAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------~~~ 425 (1156)
++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERD---ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEEC---CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEE
Confidence 68999999996 346999999999999999999999999999999999999999999999873 689
Q ss_pred EecCCcCCC-ccHHHHhhcCCC----CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccC
Q 037346 426 VAQSPWIQS-GKIEENILFGKE----MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQD 500 (1156)
Q Consensus 426 v~Q~~~~~~-~ti~eni~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~ 500 (1156)
++|++.++. .|++||+.++.. .++++++++++.+++.+..+ ....+||||||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFED-----------VPVRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhh-----------CChhhcCHHHHHHHHHHHHHhcC
Confidence 999987765 599999987532 23456777888888865432 34568999999999999999999
Q ss_pred CCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEE
Q 037346 501 ADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVI 552 (1156)
Q Consensus 501 ~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l 552 (1156)
|+++||||||++||+.+.+.+.+.+.. .+++|+|++||+++++.. .++++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999999998776543 357899999999999975 5677666
No 348
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.1e-34 Score=313.61 Aligned_cols=202 Identities=27% Similarity=0.451 Sum_probs=182.2
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchh
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRS 1026 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~ 1026 (1156)
...++|++|+.++++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++++||++.+|+.|+++
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~ 94 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFNRSIRD 94 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhccchHHH
Confidence 34799999999999999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred ccCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1027 NLDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1027 Nl~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
|+.+... ...+++.++++..++.+++..+|.++++. ||||+++|++|||||||++||+.+.
T Consensus 95 nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~ 174 (237)
T cd03252 95 NIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESE 174 (237)
T ss_pred HhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHH
Confidence 9986543 34567788888888888888776555421 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHH
Q 037346 1088 NQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVA 1149 (1156)
Q Consensus 1088 ~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~ 1149 (1156)
..+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++++ .+.|+.+++
T Consensus 175 ~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 175 HAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred HHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 9999999998778999999999999989999999999999999999999975 678888765
No 349
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.9e-34 Score=304.15 Aligned_cols=180 Identities=23% Similarity=0.298 Sum_probs=152.9
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------------eEEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------------TKAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------------~~~~ 425 (1156)
++++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +++|
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYH---DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeC---CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEE
Confidence 68999999996 35799999999999999999999999999999999999999999999987 3689
Q ss_pred EecCCcCC-CccHHHHhhcCCC--CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 426 VAQSPWIQ-SGKIEENILFGKE--MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 426 v~Q~~~~~-~~ti~eni~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
++|++.++ ..|++||+.++.. .++.+..++++..++.+.. .....+||||||||++||||++++|+
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRLFSLEHLI-----------DYPCGLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHHcCCchhh-----------hCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 99999875 5799999998632 2234556666666664322 23345799999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEEE
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLILV 551 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~ 551 (1156)
++||||||++||+.+.+.+.+.+.. .++.|+|++||+.+.+..||.-++
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 9999999999999999998876643 458899999999999999987553
No 350
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1e-33 Score=312.74 Aligned_cols=196 Identities=22% Similarity=0.286 Sum_probs=154.7
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCC--CCCCcEEEEcC--------------
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGV--PKESGIIRLCG-------------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~--~~~~G~i~~~g-------------- 421 (1156)
++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|++ +|++|+|.++|
T Consensus 2 i~~~nl~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (248)
T PRK09580 2 LSIKDLHVSVE---DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGE 78 (248)
T ss_pred eEEEEEEEEeC---CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhc
Confidence 78999999996 357999999999999999999999999999999999995 69999999987
Q ss_pred eEEEEecCCcCCCc-cHHHHhhcC-------CC---CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCC-CCCCH
Q 037346 422 TKAYVAQSPWIQSG-KIEENILFG-------KE---MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERG-INLSG 485 (1156)
Q Consensus 422 ~~~~v~Q~~~~~~~-ti~eni~~~-------~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g-~~LSg 485 (1156)
.++|++|++.++.. |..+++.+. .. .+ .++.++.++..++.+ ++.+ ... .+|||
T Consensus 79 ~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~---~~~~~~LS~ 148 (248)
T PRK09580 79 GIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPE-------DLLT---RSVNVGFSG 148 (248)
T ss_pred ceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCCh-------hhcc---cCCCCCCCH
Confidence 27899999876543 544443221 10 11 122333444444421 1111 222 37999
Q ss_pred HHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc--CCEEEEEeCCeEEEcc
Q 037346 486 GQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA--ADLILVIKDGKITQAG 561 (1156)
Q Consensus 486 GqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~--~d~i~~l~~G~i~~~g 561 (1156)
|||||++||||++++|+++||||||++||+.+.+.+.+.+.. ..++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g 228 (248)
T PRK09580 149 GEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSG 228 (248)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeC
Confidence 999999999999999999999999999999999988775533 347899999999998875 8999999999999999
Q ss_pred ChHHH
Q 037346 562 KYSDI 566 (1156)
Q Consensus 562 ~~~~l 566 (1156)
+++..
T Consensus 229 ~~~~~ 233 (248)
T PRK09580 229 DFTLV 233 (248)
T ss_pred CHHHH
Confidence 88744
No 351
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=289.72 Aligned_cols=195 Identities=28% Similarity=0.430 Sum_probs=167.5
Q ss_pred eEEEEEEEEEEc-------------CCCCceeeCCCCCCHHHHHHHHhhcccCCC-----ceEEEcCeeCCC--CChHHH
Q 037346 947 EVNIRHLQVRYA-------------PNLPLVLRGRTGSGKSTLIQTLFRIVESTA-----GHILIDGKDISL--IGLHDL 1006 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~-------------~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~-----G~I~idG~di~~--i~~~~L 1006 (1156)
.++++|+++-|. ++.-.+|.|||||||||++++|-|+.+... |+|.+||.||.+ ++.-.|
T Consensus 7 ~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~l 86 (253)
T COG1117 7 AIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVEL 86 (253)
T ss_pred eeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHH
Confidence 466667777664 344456779999999999999999999876 999999999987 579999
Q ss_pred hhcCeeeccccccccccchhccCCCC------C-CCHHHHHHHHHHcCCChHHHhh----cCCccc-------ccccccc
Q 037346 1007 RTRLSIIPQDPTMFEGTTRSNLDPLE------E-HADEQIWEALDKCQLGDEVRKK----KGKLDS-------QGRVLLK 1068 (1156)
Q Consensus 1007 R~~i~~VpQdp~LF~gTIr~Nl~~~~------~-~~deei~~al~~~~l~~~i~~l----p~gl~s-------~ARALLr 1068 (1156)
|+++|+|+|.|.-|..||+||+.++. + .-||-++++|++|.|||.+... +.+|.- .||||.-
T Consensus 87 Rr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIARalAv 166 (253)
T COG1117 87 RRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIARALAV 166 (253)
T ss_pred HHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHHHHHhc
Confidence 99999999999999999999998752 1 1256689999999999988642 223322 2999999
Q ss_pred CCCEEEEecCCcCCCHHHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCC
Q 037346 1069 KSKVLVLDEATASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKS 1141 (1156)
Q Consensus 1069 ~~~ILiLDEaTS~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~ 1141 (1156)
+|+||+||||||+|||.+..+|.+.|.++.++-|||+|||.+.-.. -+|+...+-.|++||+|.-+++..++.
T Consensus 167 ~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~P~ 240 (253)
T COG1117 167 KPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTNPK 240 (253)
T ss_pred CCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcCcc
Confidence 9999999999999999999999999999999999999999997654 589999999999999999999998764
No 352
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3e-34 Score=328.13 Aligned_cols=198 Identities=25% Similarity=0.381 Sum_probs=176.8
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHH----hhcCeeeccccccccc
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDL----RTRLSIIPQDPTMFEG 1022 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~L----R~~i~~VpQdp~LF~g 1022 (1156)
...++|++|...+++.++|.|+||||||||+++|.|+++|++|+|++||.|+...+...+ |+.++||||++.+|..
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 457999999999999999999999999999999999999999999999999999998888 7899999999999974
Q ss_pred -cchhccCCCC---CC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1023 -TTRSNLDPLE---EH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1023 -TIr~Nl~~~~---~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
|+++|+.+.. .. ..+++.++|+.++|.++....|..|..+ ||||+++|+|||||||||+||+.+.
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r 165 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIR 165 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHH
Confidence 9999996431 11 2356889999999999998888877655 8999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCceEEEeecCcccc-cccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1088 NQIQQTLRQHF--SDCTVVTIAHRITSV-LDSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1088 ~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
+.+++.+.++. .++|+|+|||+++.+ .-||+|++|++|+|++.|+|++++.++...|
T Consensus 166 ~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 166 DSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 99999998764 378999999999875 5599999999999999999999998654433
No 353
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-34 Score=272.42 Aligned_cols=198 Identities=26% Similarity=0.377 Sum_probs=170.2
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.|++++++|.|+ ...+|-||+|+.+.||.+.+.||+|+|||||++.+.=+--|.+|+..+.|+
T Consensus 2 sirv~~in~~yg---~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k~i~ 78 (242)
T COG4161 2 SIQLNGINCFYG---AHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred ceEEcccccccc---cchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHHHHH
Confidence 488999999997 357999999999999999999999999999999999888899999988762
Q ss_pred -----EEEEecCCcCCC-ccHHHHhhc------CCCC--CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHH
Q 037346 423 -----KAYVAQSPWIQS-GKIEENILF------GKEM--DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQK 488 (1156)
Q Consensus 423 -----~~~v~Q~~~~~~-~ti~eni~~------~~~~--~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqk 488 (1156)
+|+|+|+-.+.+ .||.||+.- |.+. ...+..+.++...|.+..+.+| -.|||||+
T Consensus 79 ~lr~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~p-----------lhlsggqq 147 (242)
T COG4161 79 DLRRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYP-----------LHLSGGQQ 147 (242)
T ss_pred HHHHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCc-----------eecccchh
Confidence 699999987765 599999864 2222 2345567888888888877777 47999999
Q ss_pred HHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHH
Q 037346 489 QRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSD 565 (1156)
Q Consensus 489 qRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~ 565 (1156)
|||+|||||+.+|+++++||||++|||+...++.+.+.. ..|.|-++|||..+..+. |.+|+.|++|+|++.|+.+-
T Consensus 148 qrvaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive~g~a~~ 227 (242)
T COG4161 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred hhHHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEeecchhh
Confidence 999999999999999999999999999988888775533 458899999999999875 99999999999999999876
Q ss_pred HHh
Q 037346 566 ILN 568 (1156)
Q Consensus 566 l~~ 568 (1156)
+.+
T Consensus 228 ft~ 230 (242)
T COG4161 228 FTE 230 (242)
T ss_pred ccC
Confidence 544
No 354
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.5e-33 Score=301.89 Aligned_cols=183 Identities=26% Similarity=0.290 Sum_probs=156.1
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe----------EEEE
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT----------KAYV 426 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~----------~~~v 426 (1156)
.++++|+++.|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 2 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (207)
T PRK13539 2 MLEGEDLACVRG---GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPDVAEACHYL 78 (207)
T ss_pred EEEEEeEEEEEC---CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchhhHhhcEEe
Confidence 478999999996 346999999999999999999999999999999999999999999999883 5899
Q ss_pred ecCCcCC-CccHHHHhhcCCC---CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCC
Q 037346 427 AQSPWIQ-SGKIEENILFGKE---MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDAD 502 (1156)
Q Consensus 427 ~Q~~~~~-~~ti~eni~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ 502 (1156)
+|++.++ ..|++||+.+... .++++..++++.+++.+... ....+||||||||++||||++++|+
T Consensus 79 ~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la~al~~~p~ 147 (207)
T PRK13539 79 GHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPLAH-----------LPFGYLSAGQKRRVALARLLVSNRP 147 (207)
T ss_pred cCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHc-----------CChhhcCHHHHHHHHHHHHHhcCCC
Confidence 9887654 5799999976432 23455777888888865332 2335899999999999999999999
Q ss_pred eeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeC
Q 037346 503 IFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKD 554 (1156)
Q Consensus 503 illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~ 554 (1156)
++||||||++||+.+.+++.+.+.. .+|+|+|++||+++.++. |+++.++.
T Consensus 148 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 148 IWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 9999999999999999998876643 458999999999999887 99988754
No 355
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-34 Score=297.88 Aligned_cols=181 Identities=25% Similarity=0.459 Sum_probs=162.8
Q ss_pred cceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------------EEEEecCCcCCCc-cHHH
Q 037346 378 NINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------------KAYVAQSPWIQSG-KIEE 439 (1156)
Q Consensus 378 ~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------------~~~v~Q~~~~~~~-ti~e 439 (1156)
++||+.+.-.++||-|+||||||||+|+|.|+..|++|.|.+||+ +|||+|+.-+|.. ||+.
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPdeG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tVrg 95 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPDEGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTVRG 95 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCccccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEEec
Confidence 578888887899999999999999999999999999999999993 6999999999865 9999
Q ss_pred HhhcCCCCC-HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHH
Q 037346 440 NILFGKEMD-RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTG 518 (1156)
Q Consensus 440 ni~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~ 518 (1156)
|+.||.... ...+++++...++.+.++++| .+||||+||||||+|||+.+|++||||||+|+||...+
T Consensus 96 NL~YG~~~~~~~~fd~iv~lLGI~hLL~R~P-----------~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK 164 (352)
T COG4148 96 NLRYGMWKSMRAQFDQLVALLGIEHLLDRYP-----------GTLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRK 164 (352)
T ss_pred chhhhhcccchHhHHHHHHHhCcHHHHhhCC-----------CccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchh
Confidence 999998754 668899999999999888777 58999999999999999999999999999999999998
Q ss_pred HHHHHHHHh---cCCCEEEEEccCCCcc-ccCCEEEEEeCCeEEEccChHHHHhc
Q 037346 519 AHLFKFCWV---SSSKTVIYATHQVEFL-PAADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 519 ~~i~~~~~~---~~~~tvi~vtH~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
++++-.+-+ ..+--++.|||.++.+ +.||+|++|++|++...|..++++..
T Consensus 165 ~EilpylERL~~e~~IPIlYVSHS~~Ev~RLAd~vV~le~GkV~A~g~~e~v~~~ 219 (352)
T COG4148 165 REILPYLERLRDEINIPILYVSHSLDEVLRLADRVVVLENGKVKASGPLEEVWGS 219 (352)
T ss_pred hHHHHHHHHHHHhcCCCEEEEecCHHHHHhhhheEEEecCCeEEecCcHHHHhcC
Confidence 888765533 3456799999999876 56999999999999999999998864
No 356
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=4.8e-34 Score=298.81 Aligned_cols=176 Identities=30% Similarity=0.444 Sum_probs=141.7
Q ss_pred EEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCeEEEEecCCcCCCccHH
Q 037346 359 EIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGTKAYVAQSPWIQSGKIE 438 (1156)
Q Consensus 359 ~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~~~~v~Q~~~~~~~ti~ 438 (1156)
+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|..- .+ ......+
T Consensus 1 ~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~--~~---~~~~~~~ 72 (180)
T cd03214 1 EVENLSVGYG---GRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDL--AS---LSPKELA 72 (180)
T ss_pred CeeEEEEEEC---CeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEC--Cc---CCHHHHH
Confidence 4789999996 25799999999999999999999999999999999999999999999998521 11 0001122
Q ss_pred HHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHH
Q 037346 439 ENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTG 518 (1156)
Q Consensus 439 eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~ 518 (1156)
..+.+- .++++.+++.+.+. ..+.+||||||||++||||++.+|+++||||||++||+.+.
T Consensus 73 ~~i~~~--------~q~l~~~gl~~~~~-----------~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~ 133 (180)
T cd03214 73 RKIAYV--------PQALELLGLAHLAD-----------RPFNELSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQ 133 (180)
T ss_pred HHHhHH--------HHHHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHH
Confidence 222211 11677777765443 34578999999999999999999999999999999999999
Q ss_pred HHHHHHHHh--cC-CCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 519 AHLFKFCWV--SS-SKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 519 ~~i~~~~~~--~~-~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
+.+.+.+.. .+ ++|+|++||+++.+. .||++++|++|++.+.|
T Consensus 134 ~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 134 IELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 988776543 23 789999999999974 59999999999998653
No 357
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.1e-33 Score=290.57 Aligned_cols=159 Identities=25% Similarity=0.385 Sum_probs=130.3
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCeEEEEecCCcCCCccH
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGTKAYVAQSPWIQSGKI 437 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~~~~v~Q~~~~~~~ti 437 (1156)
++++|++++|+ +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|..- .. .+.
T Consensus 1 l~~~~l~~~~~---~~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~--~~------~~~ 69 (163)
T cd03216 1 LELRGITKRFG---GVKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEV--SF------ASP 69 (163)
T ss_pred CEEEEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEC--Cc------CCH
Confidence 46899999996 34799999999999999999999999999999999999999999999998410 00 000
Q ss_pred HHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHH
Q 037346 438 EENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHT 517 (1156)
Q Consensus 438 ~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~ 517 (1156)
++ .+. +..+. .+ +||||||||++||||++++|+++||||||++||+.+
T Consensus 70 ~~-----------~~~---~~i~~------~~------------qLS~G~~qrl~laral~~~p~illlDEP~~~LD~~~ 117 (163)
T cd03216 70 RD-----------ARR---AGIAM------VY------------QLSVGERQMVEIARALARNARLLILDEPTAALTPAE 117 (163)
T ss_pred HH-----------HHh---cCeEE------EE------------ecCHHHHHHHHHHHHHhcCCCEEEEECCCcCCCHHH
Confidence 00 000 00000 00 199999999999999999999999999999999999
Q ss_pred HHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEE
Q 037346 518 GAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQ 559 (1156)
Q Consensus 518 ~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~ 559 (1156)
++.+.+.+.. .++.|+|++||+++.+. .||++++|++|++++
T Consensus 118 ~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 118 VERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9998876644 35889999999999876 599999999999874
No 358
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-34 Score=346.55 Aligned_cols=201 Identities=19% Similarity=0.298 Sum_probs=165.5
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC-CCCcEEEEcCe------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP-KESGIIRLCGT------------ 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~-~~~G~i~~~g~------------ 422 (1156)
..++++|+++.|+..++.++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.
T Consensus 258 ~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~ 337 (506)
T PRK13549 258 VILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIA 337 (506)
T ss_pred ceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHH
Confidence 35999999999953223579999999999999999999999999999999999998 59999999872
Q ss_pred --EEEEecCC---cCC-CccHHHHhhcCCC--------CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCC
Q 037346 423 --KAYVAQSP---WIQ-SGKIEENILFGKE--------MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLS 484 (1156)
Q Consensus 423 --~~~v~Q~~---~~~-~~ti~eni~~~~~--------~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LS 484 (1156)
++|++|+| .++ +.|+.||+.++.. .+. ++.+++++.+++... .......+||
T Consensus 338 ~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS 407 (506)
T PRK13549 338 QGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTA----------SPELAIARLS 407 (506)
T ss_pred CCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCC----------CcccccccCC
Confidence 69999996 344 4699999987521 121 234556666666311 1234457899
Q ss_pred HHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 485 GGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 485 gGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
||||||++||||++.+|++|||||||++||+.+.+.+++.+.. .+|+|||++||+++.+. .||++++|++|+++..|
T Consensus 408 gG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~ 487 (506)
T PRK13549 408 GGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDL 487 (506)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEe
Confidence 9999999999999999999999999999999999998776543 45899999999999886 59999999999999988
Q ss_pred ChHHH
Q 037346 562 KYSDI 566 (1156)
Q Consensus 562 ~~~~l 566 (1156)
+.+++
T Consensus 488 ~~~~~ 492 (506)
T PRK13549 488 INHNL 492 (506)
T ss_pred ccccC
Confidence 87665
No 359
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-34 Score=300.59 Aligned_cols=187 Identities=26% Similarity=0.360 Sum_probs=159.7
Q ss_pred cEEEeeeEEEeCCCCC------CCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCeEEEEecCC
Q 037346 357 AIEIIDGSFSWDFSSP------NPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGTKAYVAQSP 430 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~------~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~~~~v~Q~~ 430 (1156)
.++++|+++.|+.... ..+++||||+|++||+++|||+|||||||+-++|+|+++|++|+|.++|+...-.
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~--- 80 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKL--- 80 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhc---
Confidence 5889999999975321 3689999999999999999999999999999999999999999999998641100
Q ss_pred cCCCccHHHHhhcCCCCCHHHHHHHHHHhCCchh-hhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCC
Q 037346 431 WIQSGKIEENILFGKEMDRERYERVLEACSLKKD-LEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDP 509 (1156)
Q Consensus 431 ~~~~~ti~eni~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep 509 (1156)
+ .....+++.+.++.+++..+ +.+. ..+|||||||||+|||||.-+|+++++|||
T Consensus 81 -----~--------~~~~~~~v~elL~~Vgl~~~~~~ry-----------PhelSGGQrQRi~IARALal~P~liV~DEp 136 (268)
T COG4608 81 -----S--------KEERRERVLELLEKVGLPEEFLYRY-----------PHELSGGQRQRIGIARALALNPKLIVADEP 136 (268)
T ss_pred -----c--------hhHHHHHHHHHHHHhCCCHHHhhcC-----------CcccCchhhhhHHHHHHHhhCCcEEEecCc
Confidence 0 22234678889999998764 4444 468999999999999999999999999999
Q ss_pred CCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHhcC
Q 037346 510 FSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILNSG 570 (1156)
Q Consensus 510 ~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 570 (1156)
+|+||...+.++.+.+.. ..|-|.++||||++.+++ ||+|.+|..|+|++.|+.+++....
T Consensus 137 vSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p 201 (268)
T COG4608 137 VSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNP 201 (268)
T ss_pred hhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCC
Confidence 999999999998876543 458899999999999986 9999999999999999999998753
No 360
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7e-34 Score=291.34 Aligned_cols=204 Identities=25% Similarity=0.399 Sum_probs=174.0
Q ss_pred CeEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChH---HHhhcCeeeccccccccc
Q 037346 946 GEVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLH---DLRTRLSIIPQDPTMFEG 1022 (1156)
Q Consensus 946 g~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~LR~~i~~VpQdp~LF~g 1022 (1156)
+.+.++||+++..+++-.++.|+||||||||++++.|+..|++|+|.|+|.|+.+++-+ .+|+++|+++|.--||+.
T Consensus 20 ~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALFss 99 (263)
T COG1127 20 DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALFSS 99 (263)
T ss_pred CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHhheeEEeeccccccc
Confidence 35677777777778888888899999999999999999999999999999999998864 569999999999999987
Q ss_pred -cchhccCC-CCC---CCHHH----HHHHHHHcCCChH-HHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHH
Q 037346 1023 -TTRSNLDP-LEE---HADEQ----IWEALDKCQLGDE-VRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTA 1085 (1156)
Q Consensus 1023 -TIr~Nl~~-~~~---~~dee----i~~al~~~~l~~~-i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~ 1085 (1156)
||+||+.+ ..+ .++++ +..-|+.|||... ....|..|.-+ ||||.-+|+||++|||||+|||.
T Consensus 100 ltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI 179 (263)
T COG1127 100 LTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPI 179 (263)
T ss_pred cchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcc
Confidence 99999975 222 33443 4466889999988 55567666544 89999999999999999999999
Q ss_pred HHHHHHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHHHHHH
Q 037346 1086 TDNQIQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVA 1149 (1156)
Q Consensus 1086 te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~ 1149 (1156)
+...+-+.|+++.+ +.|+++|||+++++.. ||||+++.+|+|+-.|+++||.+.++...++.++
T Consensus 180 ~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~sd~P~v~qf~~ 246 (263)
T COG1127 180 SAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLASDDPWVRQFFN 246 (263)
T ss_pred hHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhCCCHHHHHHhc
Confidence 99998888877643 7899999999998876 7999999999999999999999987777666654
No 361
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.2e-33 Score=344.83 Aligned_cols=207 Identities=22% Similarity=0.329 Sum_probs=168.6
Q ss_pred ccEEEeeeEEEeCC--CCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEc-C-----------
Q 037346 356 TAIEIIDGSFSWDF--SSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLC-G----------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~--~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~-g----------- 421 (1156)
..++++|+++.|+. .++.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++ |
T Consensus 278 ~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~ 357 (520)
T TIGR03269 278 PIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGP 357 (520)
T ss_pred ceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccch
Confidence 36999999999952 123469999999999999999999999999999999999999999999984 3
Q ss_pred --------eEEEEecCCcCCC-ccHHHHhhcCC--CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHH
Q 037346 422 --------TKAYVAQSPWIQS-GKIEENILFGK--EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 422 --------~~~~v~Q~~~~~~-~ti~eni~~~~--~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
+++|++|++.++. .|++||+.++. ... +++..++++.+++.... .+........+||||
T Consensus 358 ~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~~~~~~LSgG 431 (520)
T TIGR03269 358 DGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEK------AEEILDKYPDELSEG 431 (520)
T ss_pred hhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCcc------chhhhhCChhhCCHH
Confidence 2799999987765 59999997632 111 23445566777664310 000123456789999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccC
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGK 562 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~ 562 (1156)
||||++|||||+.+|++|||||||++||+.+.+.+.+.+.. ..|.|+|+|||+++.+. .||+|++|++|++++.|+
T Consensus 432 q~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~ 511 (520)
T TIGR03269 432 ERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGD 511 (520)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999998876643 24789999999999886 599999999999999998
Q ss_pred hHHHHh
Q 037346 563 YSDILN 568 (1156)
Q Consensus 563 ~~~l~~ 568 (1156)
++++.+
T Consensus 512 ~~~~~~ 517 (520)
T TIGR03269 512 PEEIVE 517 (520)
T ss_pred HHHHHh
Confidence 887653
No 362
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=100.00 E-value=1.3e-33 Score=309.06 Aligned_cols=190 Identities=22% Similarity=0.275 Sum_probs=154.7
Q ss_pred EEeCCCCCCCccccceEEee-----CCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC-eEEEEecCCcC-CCccH
Q 037346 365 FSWDFSSPNPTLRNINLKVF-----HGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-TKAYVAQSPWI-QSGKI 437 (1156)
Q Consensus 365 f~~~~~~~~~~l~~i~l~i~-----~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-~~~~v~Q~~~~-~~~ti 437 (1156)
|+|+. ....++|++|+++ +||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.. ++.|+
T Consensus 1 ~~y~~--~~~~~~~~~l~~~~~~i~~Ge~~~i~G~NGsGKSTLlk~L~G~~~p~~G~i~~~g~~i~~~~q~~~~~~~~tv 78 (246)
T cd03237 1 YTYPT--MKKTLGEFTLEVEGGSISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIELDTVSYKPQYIKADYEGTV 78 (246)
T ss_pred CCCcc--cccccCcEEEEEecCCcCCCCEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCceEEEecccccCCCCCCH
Confidence 56763 3457888888886 6899999999999999999999999999999999999 89999999874 67899
Q ss_pred HHHhhcCCC-C--CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcC
Q 037346 438 EENILFGKE-M--DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVD 514 (1156)
Q Consensus 438 ~eni~~~~~-~--~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD 514 (1156)
+||+.+... . ...+..++++.+++.+.+ .....+||||||||++|||||+.+|+++||||||++||
T Consensus 79 ~e~l~~~~~~~~~~~~~~~~~l~~l~l~~~~-----------~~~~~~LSgGe~qrv~iaraL~~~p~llllDEPt~~LD 147 (246)
T cd03237 79 RDLLSSITKDFYTHPYFKTEIAKPLQIEQIL-----------DREVPELSGGELQRVAIAACLSKDADIYLLDEPSAYLD 147 (246)
T ss_pred HHHHHHHhhhccccHHHHHHHHHHcCCHHHh-----------hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 999975422 1 123456677777775433 34557899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEE--EccChHHHH
Q 037346 515 DHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKIT--QAGKYSDIL 567 (1156)
Q Consensus 515 ~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~--~~g~~~~l~ 567 (1156)
+.++..+.+.+.. ..++|+|+|||+++.+. .||+|++|+++..+ ..+++.++.
T Consensus 148 ~~~~~~l~~~l~~~~~~~~~tiiivsHd~~~~~~~~d~i~~l~~~~~~~~~~~~~~~~~ 206 (246)
T cd03237 148 VEQRLMASKVIRRFAENNEKTAFVVEHDIIMIDYLADRLIVFEGEPSVNGVANPPQSLR 206 (246)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEcCCCeeEEEeCCchHHH
Confidence 9999988776543 24799999999999987 59999999765433 445565544
No 363
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=8.1e-34 Score=323.02 Aligned_cols=201 Identities=22% Similarity=0.362 Sum_probs=176.3
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHH---HhhcCeeecccccccc-cc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHD---LRTRLSIIPQDPTMFE-GT 1023 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---LR~~i~~VpQdp~LF~-gT 1023 (1156)
..++||||..++++.++|.|+||||||||+++|.|+++|++|+|.+||.++.+++..+ +|++|++|||++.+|. .|
T Consensus 19 ~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~t 98 (343)
T TIGR02314 19 QALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRT 98 (343)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCc
Confidence 5799999999999989999999999999999999999999999999999999987655 5789999999999995 79
Q ss_pred chhccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHH
Q 037346 1024 TRSNLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQ 1089 (1156)
Q Consensus 1024 Ir~Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~ 1089 (1156)
+++|+.+.. ..+ ++++.++++.+|+.+.....|..|..+ ||||+.+|+|||||||||+||+++...
T Consensus 99 v~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~ 178 (343)
T TIGR02314 99 VFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQS 178 (343)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHH
Confidence 999996421 122 345789999999999888888877765 899999999999999999999999999
Q ss_pred HHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChH-HHHH
Q 037346 1090 IQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSF-AQLV 1148 (1156)
Q Consensus 1090 I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f-~~l~ 1148 (1156)
|.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|+|+|.|++++++.++...+ +.++
T Consensus 179 i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~~~~~~~~ 241 (343)
T TIGR02314 179 ILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKTPLAQKFI 241 (343)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCcHHHHHHH
Confidence 9999998753 7899999999999865 99999999999999999999987654433 3443
No 364
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.1e-33 Score=298.04 Aligned_cols=178 Identities=21% Similarity=0.286 Sum_probs=150.8
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------EEEEec
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT---------KAYVAQ 428 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~---------~~~v~Q 428 (1156)
++++|++++|+ ++.++ ++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++|++|
T Consensus 2 l~~~~l~~~~~---~~~l~-~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (195)
T PRK13541 2 LSLHQLQFNIE---QKNLF-DLSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIAKPYCTYIGH 77 (195)
T ss_pred eEEEEeeEEEC---CcEEE-EEEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhhhhhEEeccC
Confidence 68999999995 23455 599999999999999999999999999999999999999999983 689999
Q ss_pred CCcC-CCccHHHHhhcCCCC--CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeee
Q 037346 429 SPWI-QSGKIEENILFGKEM--DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFL 505 (1156)
Q Consensus 429 ~~~~-~~~ti~eni~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~ill 505 (1156)
++.+ ++.|++||+.++... ..++..++++.+++.+.. .+.+.+||||||||++||||++++|+++|
T Consensus 78 ~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~~rl~la~al~~~p~~ll 146 (195)
T PRK13541 78 NLGLKLEMTVFENLKFWSEIYNSAETLYAAIHYFKLHDLL-----------DEKCYSLSSGMQKIVAIARLIACQSDLWL 146 (195)
T ss_pred CcCCCccCCHHHHHHHHHHhcccHHHHHHHHHHcCCHhhh-----------ccChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8755 567999999875432 344566677777775433 34567899999999999999999999999
Q ss_pred eeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEE
Q 037346 506 LDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLIL 550 (1156)
Q Consensus 506 lDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~ 550 (1156)
|||||++||+.+.+.+.+.+.. .+++|+|++||+++.++.||.+.
T Consensus 147 lDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~ 193 (195)
T PRK13541 147 LDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLESSIKSAQILQ 193 (195)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCccccchhheec
Confidence 9999999999999888776532 46899999999999999998763
No 365
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.4e-33 Score=306.72 Aligned_cols=185 Identities=27% Similarity=0.345 Sum_probs=151.9
Q ss_pred EEEeeeEEEeCCC---C-CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEc--C----------
Q 037346 358 IEIIDGSFSWDFS---S-PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLC--G---------- 421 (1156)
Q Consensus 358 i~~~~~~f~~~~~---~-~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~--g---------- 421 (1156)
++++|++++|+.. + ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++ |
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 6899999999631 1 2469999999999999999999999999999999999999999999996 3
Q ss_pred ---------eEEEEecCCcCCC-ccHHHHhhcCC---CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCC
Q 037346 422 ---------TKAYVAQSPWIQS-GKIEENILFGK---EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLS 484 (1156)
Q Consensus 422 ---------~~~~v~Q~~~~~~-~ti~eni~~~~---~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LS 484 (1156)
.++|++|+|.++. .|++||+.++. ..+ .++..++++..++.+... ...+.+||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~----------~~~~~~LS 151 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLW----------HLPPATFS 151 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh----------hCCcccCC
Confidence 2689999998765 59999997631 122 234455566666643221 23467899
Q ss_pred HHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEE
Q 037346 485 GGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVI 552 (1156)
Q Consensus 485 gGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l 552 (1156)
||||||++|||||+.+|+++||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+. .||+++.+
T Consensus 152 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 152 GGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 9999999999999999999999999999999999998876644 35889999999999885 69999876
No 366
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.4e-33 Score=344.82 Aligned_cols=201 Identities=21% Similarity=0.369 Sum_probs=167.7
Q ss_pred ccEEEeeeEEEeCCC--------CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC------
Q 037346 356 TAIEIIDGSFSWDFS--------SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG------ 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~--------~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g------ 421 (1156)
..++++|+++.|+.. +++++|+|+||+|++|++++|+||||||||||+++|+|+++ ++|+|.++|
T Consensus 274 ~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~~ 352 (529)
T PRK15134 274 PLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHNL 352 (529)
T ss_pred CcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEcccc
Confidence 358999999999521 13579999999999999999999999999999999999985 899999987
Q ss_pred ----------eEEEEecCCc--CC-CccHHHHhhcCCC-----CC----HHHHHHHHHHhCCch-hhhhCCCCCcccccc
Q 037346 422 ----------TKAYVAQSPW--IQ-SGKIEENILFGKE-----MD----RERYERVLEACSLKK-DLEVLPFGDQTIIGE 478 (1156)
Q Consensus 422 ----------~~~~v~Q~~~--~~-~~ti~eni~~~~~-----~~----~~~~~~~~~~~~l~~-~~~~~~~g~~t~v~~ 478 (1156)
.++|++|+|. ++ +.|++||+.++.. .+ +++..++++.+++.. ..+ .
T Consensus 353 ~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~ 421 (529)
T PRK15134 353 NRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETRH-----------R 421 (529)
T ss_pred chhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHHh-----------c
Confidence 2699999983 54 4599999987421 11 234556677777753 222 3
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--c-CCCEEEEEccCCCccc-cCCEEEEEeC
Q 037346 479 RGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--S-SSKTVIYATHQVEFLP-AADLILVIKD 554 (1156)
Q Consensus 479 ~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~-~~~tvi~vtH~~~~~~-~~d~i~~l~~ 554 (1156)
...+|||||||||+||||++.+|+++||||||++||+.+++.+++.+.. . .|+|+|+|||+++.+. .||+|++|++
T Consensus 422 ~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~ 501 (529)
T PRK15134 422 YPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQ 501 (529)
T ss_pred CCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 4568999999999999999999999999999999999999999886643 2 4789999999999876 5999999999
Q ss_pred CeEEEccChHHHHh
Q 037346 555 GKITQAGKYSDILN 568 (1156)
Q Consensus 555 G~i~~~g~~~~l~~ 568 (1156)
|++++.|+.+++.+
T Consensus 502 G~i~~~~~~~~~~~ 515 (529)
T PRK15134 502 GEVVEQGDCERVFA 515 (529)
T ss_pred CEEEEEcCHHHHhc
Confidence 99999999988865
No 367
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=341.27 Aligned_cols=200 Identities=24% Similarity=0.357 Sum_probs=170.0
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCc--
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPW-- 431 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~-- 431 (1156)
..++++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.
T Consensus 318 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~~~q~~~~~ 394 (530)
T PRK15064 318 NALEVENLTKGFD---NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSENANIGYYAQDHAYD 394 (530)
T ss_pred ceEEEEeeEEeeC---CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCceEEEEEccccccc
Confidence 4699999999996 35699999999999999999999999999999999999999999999987 6899999974
Q ss_pred CC-CccHHHHhhcCC--CCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeC
Q 037346 432 IQ-SGKIEENILFGK--EMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDD 508 (1156)
Q Consensus 432 ~~-~~ti~eni~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDe 508 (1156)
++ ..|++||+.+.. ..++++.+++++.+++..+. ......+||||||||++||||++.+|+++||||
T Consensus 395 ~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgGq~qrv~la~al~~~p~lllLDE 464 (530)
T PRK15064 395 FENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDD----------IKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDE 464 (530)
T ss_pred CCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhH----------hcCcccccCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 33 369999986521 22345667788887774221 124557899999999999999999999999999
Q ss_pred CCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccc-cCCEEEEEeCCeEE-EccChHHHHhc
Q 037346 509 PFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLP-AADLILVIKDGKIT-QAGKYSDILNS 569 (1156)
Q Consensus 509 p~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~-~~g~~~~l~~~ 569 (1156)
||++||+.+.+.+.+.+... +.|+|+|||+++++. .||+|++|++|+++ +.|+++++.+.
T Consensus 465 Pt~~LD~~~~~~l~~~l~~~-~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 465 PTNHMDMESIESLNMALEKY-EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred CCCCCCHHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 99999999999988766544 459999999999986 49999999999998 88998887643
No 368
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=1.8e-33 Score=304.74 Aligned_cols=176 Identities=24% Similarity=0.420 Sum_probs=149.2
Q ss_pred EEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------EEEEecCCcC---CCccHHHHhhcCCC---
Q 037346 381 LKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT--------KAYVAQSPWI---QSGKIEENILFGKE--- 446 (1156)
Q Consensus 381 l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~--------~~~v~Q~~~~---~~~ti~eni~~~~~--- 446 (1156)
|+|++||+++|+|+||||||||+++|+|.++|++|+|.++|. ++|++|+|.+ ++.|+.||+.++..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~ 80 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPGKGWRHIGYVPQRHEFAWDFPISVAHTVMSGRTGHI 80 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccchHhhCcEEEecccccccCCCCccHHHHHHhcccccc
Confidence 578999999999999999999999999999999999999984 8999999865 35799999987521
Q ss_pred --------CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHH
Q 037346 447 --------MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTG 518 (1156)
Q Consensus 447 --------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~ 518 (1156)
.++++..++++.+++.+.. .....+||||||||++||||++.+|+++||||||++||+.++
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~ 149 (223)
T TIGR03771 81 GWLRRPCVADFAAVRDALRRVGLTELA-----------DRPVGELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQ 149 (223)
T ss_pred ccccCCcHHHHHHHHHHHHHhCCchhh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHH
Confidence 1123455667777775433 234567999999999999999999999999999999999999
Q ss_pred HHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 519 AHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 519 ~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
+.+.+.+.. .+|+|+|++||+++.+. .||+++++ +|++++.|+++++.+
T Consensus 150 ~~l~~~l~~~~~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~~ 201 (223)
T TIGR03771 150 ELLTELFIELAGAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQD 201 (223)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhcC
Confidence 998887644 35889999999999875 59999999 799999999988765
No 369
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=2.8e-33 Score=297.93 Aligned_cols=178 Identities=24% Similarity=0.286 Sum_probs=148.4
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------EEE
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------KAY 425 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------~~~ 425 (1156)
++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRG---ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQRDEPHRNILY 77 (198)
T ss_pred CEEEEEEEEEC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccchHHhhhheEE
Confidence 46899999996 357999999999999999999999999999999999999999999999883 589
Q ss_pred EecCCcCCC-ccHHHHhhcCCC---CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCC
Q 037346 426 VAQSPWIQS-GKIEENILFGKE---MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDA 501 (1156)
Q Consensus 426 v~Q~~~~~~-~ti~eni~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~ 501 (1156)
++|++.++. .|++||+.+... .++++..++++.+++.+.++ ....+||||||||++||||++.+|
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~~p 146 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGFED-----------LPAAQLSAGQQRRLALARLWLSRA 146 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCHHHhc-----------CChhhcCHHHHHHHHHHHHHhcCC
Confidence 999988765 699999976532 12345677777777765442 344689999999999999999999
Q ss_pred CeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEE
Q 037346 502 DIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLIL 550 (1156)
Q Consensus 502 ~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~ 550 (1156)
+++||||||++||+.+++.+.+.+.. .+|+|+|++||+...+. |++++
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~-~~~~~ 196 (198)
T TIGR01189 147 PLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGLV-EAREL 196 (198)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccccc-ceEEe
Confidence 99999999999999999888776643 45889999999985433 35544
No 370
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.4e-33 Score=304.17 Aligned_cols=186 Identities=54% Similarity=0.886 Sum_probs=172.1
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSN 1027 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~N 1027 (1156)
-.++|++|..++++-++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++++|+||+|.+|++|+++|
T Consensus 18 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~~tv~en 97 (221)
T cd03244 18 PVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRISIIPQDPVLFSGTIRSN 97 (221)
T ss_pred ccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEEEECCCCccccchHHHH
Confidence 36889999998888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHHHH
Q 037346 1028 LDPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATDNQ 1089 (1156)
Q Consensus 1028 l~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te~~ 1089 (1156)
++++.....+++.++++.+++.+++..+|.|+++. ||||+++|++|||||||++||+.+.+.
T Consensus 98 l~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~ 177 (221)
T cd03244 98 LDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDAL 177 (221)
T ss_pred hCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHH
Confidence 98776667788999999999999998777666532 899999999999999999999999999
Q ss_pred HHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecCh
Q 037346 1090 IQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSP 1133 (1156)
Q Consensus 1090 I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~ 1133 (1156)
+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|++
T Consensus 178 l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 178 IQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred HHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 99999988778999999999999999999999999999998863
No 371
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=6.5e-33 Score=300.36 Aligned_cols=205 Identities=25% Similarity=0.392 Sum_probs=172.6
Q ss_pred CccEEEeeeEEEeCCCC--------CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe----
Q 037346 355 DTAIEIIDGSFSWDFSS--------PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT---- 422 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~--------~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~---- 422 (1156)
...++.+|+...|+-.+ ...+.+++||++++||.++|||+||||||||-.+|++++++. |+|.++|+
T Consensus 274 ~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~ 352 (534)
T COG4172 274 PVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDG 352 (534)
T ss_pred CceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccc
Confidence 34688999998887432 235789999999999999999999999999999999999886 99999984
Q ss_pred ------------EEEEecCCcC---CCccHHHHhhcCCCC---------CHHHHHHHHHHhCCchhhhhCCCCCcccccc
Q 037346 423 ------------KAYVAQSPWI---QSGKIEENILFGKEM---------DRERYERVLEACSLKKDLEVLPFGDQTIIGE 478 (1156)
Q Consensus 423 ------------~~~v~Q~~~~---~~~ti~eni~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~ 478 (1156)
+-.|+|+|+- +..||.+-|.-|... .+++..++++.++|+.... .+
T Consensus 353 ~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r----------~R 422 (534)
T COG4172 353 LSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPATR----------NR 422 (534)
T ss_pred cChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHh----------hc
Confidence 4689999972 456999888766421 1345666777788876432 23
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCcccc-CCEEEEEeC
Q 037346 479 RGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPA-ADLILVIKD 554 (1156)
Q Consensus 479 ~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~-~d~i~~l~~ 554 (1156)
.+.++|||||||||||||+.-+|++++|||||||||..++.++.+.+.. ..|-+-++||||+..++. ||+|+||++
T Consensus 423 YPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~ 502 (534)
T COG4172 423 YPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRD 502 (534)
T ss_pred CCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeC
Confidence 4478999999999999999999999999999999999999999886533 557899999999999975 999999999
Q ss_pred CeEEEccChHHHHhcC
Q 037346 555 GKITQAGKYSDILNSG 570 (1156)
Q Consensus 555 G~i~~~g~~~~l~~~~ 570 (1156)
|+|+|+|+.++++++.
T Consensus 503 GkiVE~G~~~~if~~P 518 (534)
T COG4172 503 GKIVEQGPTEAVFANP 518 (534)
T ss_pred CEEeeeCCHHHHhcCC
Confidence 9999999999998754
No 372
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4e-33 Score=299.08 Aligned_cols=185 Identities=52% Similarity=0.846 Sum_probs=158.5
Q ss_pred CCCCCeEEEEEEEEEEc---------------CCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHH
Q 037346 942 RPSHGEVNIRHLQVRYA---------------PNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDL 1006 (1156)
Q Consensus 942 ~p~~g~I~~~~Vsf~Y~---------------~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~L 1006 (1156)
||..+.++++|++++|+ +++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 56666666666666664 344456779999999999999999999999999999999998888889
Q ss_pred hhcCeeeccccccccccchhccCCCCCCCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCC
Q 037346 1007 RTRLSIIPQDPTMFEGTTRSNLDPLEEHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEAT 1079 (1156)
Q Consensus 1007 R~~i~~VpQdp~LF~gTIr~Nl~~~~~~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaT 1079 (1156)
|+.++||||+|.+|++|+++|+.++....++++.++++ + ...+..|..+ |||++++|+||||||||
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~---~----~~~~~~LS~G~~qrv~laral~~~p~llllDEP~ 153 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR---V----SEGGLNLSQGQRQLLCLARALLKRPRVLVLDEAT 153 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh---c----cCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCc
Confidence 99999999999999999999998765556667777776 2 2233334333 89999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecCh
Q 037346 1080 ASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSP 1133 (1156)
Q Consensus 1080 S~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~ 1133 (1156)
++||+++...+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|+|
T Consensus 154 ~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 154 ASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999988778999999999999988999999999999999875
No 373
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-33 Score=311.96 Aligned_cols=197 Identities=23% Similarity=0.384 Sum_probs=175.3
Q ss_pred CeE-EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-c
Q 037346 946 GEV-NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-T 1023 (1156)
Q Consensus 946 g~I-~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-T 1023 (1156)
|.. .++|+++...+++-++|.|||||||||++++|+||.+|++|+|.|||.|++++++++ +.|++|+|+.-||.. |
T Consensus 14 g~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~iamVFQ~yALyPhmt 91 (338)
T COG3839 14 GSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIAMVFQNYALYPHMT 91 (338)
T ss_pred CCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEEEEeCCccccCCCc
Confidence 344 788888888888888999999999999999999999999999999999999999986 789999999999976 9
Q ss_pred chhccCCCCC-------CCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHH
Q 037346 1024 TRSNLDPLEE-------HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQ 1089 (1156)
Q Consensus 1024 Ir~Nl~~~~~-------~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~ 1089 (1156)
|++||.+.=. ..++++.++++..++.+.+...|..|..+ ||||+++|++++||||.||||++....
T Consensus 92 V~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~ 171 (338)
T COG3839 92 VYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVL 171 (338)
T ss_pred HHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHH
Confidence 9999986421 22677999999999999999999988755 899999999999999999999999998
Q ss_pred HHHHHHHhcC--CceEEEeecCccc-ccccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1090 IQQTLRQHFS--DCTVVTIAHRITS-VLDSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1090 I~~~l~~~~~--~~TvI~IaHrl~t-i~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
+...|+++.+ +.|+|.|||+... +.-+|||+||++|+|.+.|+|.|+..++...|
T Consensus 172 mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n~f 229 (338)
T COG3839 172 MRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPANLF 229 (338)
T ss_pred HHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccchh
Confidence 8888877543 6799999999754 55699999999999999999999998877655
No 374
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-33 Score=304.74 Aligned_cols=199 Identities=29% Similarity=0.459 Sum_probs=178.4
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSN 1027 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~N 1027 (1156)
-.++|++|..++++.++|.|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++++||++.+|..|++||
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~en 95 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFNDTVAEN 95 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeeccccHHHH
Confidence 36899999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred cCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHHH
Q 037346 1028 LDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATDN 1088 (1156)
Q Consensus 1028 l~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te~ 1088 (1156)
+.++.. ...+++.++++..++.+++..+|.++++. ||||+++|++|||||||++||+.+..
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~ 175 (234)
T cd03251 96 IAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESER 175 (234)
T ss_pred hhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHH
Confidence 987533 34567778888888888888776555421 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHH
Q 037346 1089 QIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQL 1147 (1156)
Q Consensus 1089 ~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l 1147 (1156)
.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|+++++..+ .+.|+.+
T Consensus 176 ~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (234)
T cd03251 176 LVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAKL 233 (234)
T ss_pred HHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhhh
Confidence 999999998788999999999999999999999999999999999999865 5555543
No 375
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-33 Score=307.32 Aligned_cols=192 Identities=24% Similarity=0.366 Sum_probs=170.2
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCCh---HHHhhcCeeeccccccccc-c
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGL---HDLRTRLSIIPQDPTMFEG-T 1023 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~LR~~i~~VpQdp~LF~g-T 1023 (1156)
-.++|+||...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+. ..+|+.+++|||++.+|.+ |
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (235)
T cd03261 14 TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLT 93 (235)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCc
Confidence 47999999999999999999999999999999999999999999999999988764 5678899999999999986 9
Q ss_pred chhccCCCC----CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHH
Q 037346 1024 TRSNLDPLE----EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDN 1088 (1156)
Q Consensus 1024 Ir~Nl~~~~----~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~ 1088 (1156)
+++|+.+.. ..+ ++++.++++.+++.++....|..|..+ ||||+++|+||||||||++||+.+.+
T Consensus 94 v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~ 173 (235)
T cd03261 94 VFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASG 173 (235)
T ss_pred HHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHH
Confidence 999996431 122 345788999999988887777766655 89999999999999999999999999
Q ss_pred HHHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcC
Q 037346 1089 QIQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1089 ~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 174 ~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 174 VIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 99999998753 7899999999998865 999999999999999999998854
No 376
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=3e-33 Score=295.86 Aligned_cols=160 Identities=26% Similarity=0.416 Sum_probs=135.3
Q ss_pred CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe---------------EEEEecCC--cCCC
Q 037346 372 PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT---------------KAYVAQSP--WIQS 434 (1156)
Q Consensus 372 ~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~---------------~~~v~Q~~--~~~~ 434 (1156)
++.+|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|. ++|++|+| .++.
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 83 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLFA 83 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhcccc
Confidence 457999999999999999999999999999999999999999999999872 68999998 4677
Q ss_pred ccHHHHhhcCC---CCCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeee
Q 037346 435 GKIEENILFGK---EMDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLD 507 (1156)
Q Consensus 435 ~ti~eni~~~~---~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlD 507 (1156)
.|++||+.++. ..+. ++.+++++.+++.+..+ +...+||||||||++|||||+.+|+++|||
T Consensus 84 ~tv~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~laral~~~p~llllD 152 (190)
T TIGR01166 84 ADVDQDVAFGPLNLGLSEAEVERRVREALTAVGASGLRE-----------RPTHCLSGGEKKRVAIAGAVAMRPDVLLLD 152 (190)
T ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCchhhhh-----------CChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 89999998752 1222 34556667777754433 345689999999999999999999999999
Q ss_pred CCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCc
Q 037346 508 DPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEF 542 (1156)
Q Consensus 508 ep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~ 542 (1156)
|||++||+.+++.+.+.+.. .+|+|+|++||+++.
T Consensus 153 EPt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 153 EPTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 99999999999998876644 358899999999875
No 377
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.3e-33 Score=343.79 Aligned_cols=190 Identities=26% Similarity=0.386 Sum_probs=161.3
Q ss_pred CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC--CcEEEEcCe---------EEEEecCCcCCC-ccHHH
Q 037346 372 PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE--SGIIRLCGT---------KAYVAQSPWIQS-GKIEE 439 (1156)
Q Consensus 372 ~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~--~G~i~~~g~---------~~~v~Q~~~~~~-~ti~e 439 (1156)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+|. +|+|.+||. ++||+|++.++. .||+|
T Consensus 80 ~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~~~~~~~i~yv~Q~~~l~~~lTV~E 159 (659)
T PLN03211 80 ERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPTKQILKRTGFVTQDDILYPHLTVRE 159 (659)
T ss_pred CCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECchhhccceEEECcccccCCcCCHHH
Confidence 457999999999999999999999999999999999999885 899999984 699999998875 59999
Q ss_pred HhhcCC------CCCH----HHHHHHHHHhCCchhhhhCCCCCcccccc-CCCCCCHHHHHHHHHHHhhccCCCeeeeeC
Q 037346 440 NILFGK------EMDR----ERYERVLEACSLKKDLEVLPFGDQTIIGE-RGINLSGGQKQRIQIARPLYQDADIFLLDD 508 (1156)
Q Consensus 440 ni~~~~------~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~-~g~~LSgGqkqRi~lAral~~~~~illlDe 508 (1156)
|+.|.. ..++ ++.+++++..+|.+ ..+|.+|+ .+..||||||||++|||||+++|+|++|||
T Consensus 160 ~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~-------~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDE 232 (659)
T PLN03211 160 TLVFCSLLRLPKSLTKQEKILVAESVISELGLTK-------CENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDE 232 (659)
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChh-------hcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeC
Confidence 998742 1222 23455666666543 34666765 467899999999999999999999999999
Q ss_pred CCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCc-c-ccCCEEEEEeCCeEEEccChHHHHh
Q 037346 509 PFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEF-L-PAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 509 p~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~-~-~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
||++||+.++.++.+.+.. .+|+|+|++||+++. + ..+|+|++|++|++++.|+++++.+
T Consensus 233 PtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~ 296 (659)
T PLN03211 233 PTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMA 296 (659)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHH
Confidence 9999999999999887644 368999999999984 4 5699999999999999999988764
No 378
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-33 Score=303.91 Aligned_cols=201 Identities=27% Similarity=0.460 Sum_probs=175.6
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSN 1027 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~N 1027 (1156)
..++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++++||++.+|..|+++|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~tv~e~ 96 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFEGTVKDN 96 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEEEecCchhchhhHHHH
Confidence 47899999999999899999999999999999999999999999999999998888888999999999999999999999
Q ss_pred cCCCC---CCCHHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHH
Q 037346 1028 LDPLE---EHADEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQ 1096 (1156)
Q Consensus 1028 l~~~~---~~~deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~ 1096 (1156)
+.+.. ...++++.++++..++. +.....+..|..+ |||++++|++|||||||++||+++.+.+.+.|++
T Consensus 97 l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~ 176 (241)
T PRK14250 97 IEYGPMLKGEKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVK 176 (241)
T ss_pred HhcchhhcCcHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 97532 12245788999999996 4566666666544 8999999999999999999999999999999988
Q ss_pred hc--CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHHHHH
Q 037346 1097 HF--SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLV 1148 (1156)
Q Consensus 1097 ~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~ 1148 (1156)
.. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++..+...|.+.+
T Consensus 177 ~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~~ 231 (241)
T PRK14250 177 LKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTKLF 231 (241)
T ss_pred HHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHHHH
Confidence 64 37899999999998775 999999999999999999999876544455444
No 379
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=5.4e-33 Score=343.66 Aligned_cols=190 Identities=27% Similarity=0.408 Sum_probs=162.8
Q ss_pred CCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC---CcEEEEcCe----------EEEEecCCcCCC-ccH
Q 037346 372 PNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE---SGIIRLCGT----------KAYVAQSPWIQS-GKI 437 (1156)
Q Consensus 372 ~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~---~G~i~~~g~----------~~~v~Q~~~~~~-~ti 437 (1156)
++++|+|+|+++++||+++|+||||||||||+++|+|..++. +|+|.++|. ++||+|++++++ .||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 578999999999999999999999999999999999999875 799999995 499999999885 599
Q ss_pred HHHhhcCCCC------C----HHHHHHHHHHhCCchhhhhCCCCCccccccC--CCCCCHHHHHHHHHHHhhccCCCeee
Q 037346 438 EENILFGKEM------D----RERYERVLEACSLKKDLEVLPFGDQTIIGER--GINLSGGQKQRIQIARPLYQDADIFL 505 (1156)
Q Consensus 438 ~eni~~~~~~------~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~--g~~LSgGqkqRi~lAral~~~~~ill 505 (1156)
+||+.|+... . +++.+++++..+|. +..+|.+|+. +..||||||||++|||||+.+|++++
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~-------~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vll 189 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLR-------KCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLF 189 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCch-------hcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEE
Confidence 9999986421 1 12345555555543 3457889874 47899999999999999999999999
Q ss_pred eeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCC-c-cccCCEEEEEeCCeEEEccChHHHHh
Q 037346 506 LDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVE-F-LPAADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 506 lDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~-~-~~~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
|||||++||+.++.++++.+.+ .+|+|+|+++|+++ . .+.+|++++|++|++++.|+++++.+
T Consensus 190 lDEPtsgLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~ 256 (617)
T TIGR00955 190 CDEPTSGLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVP 256 (617)
T ss_pred eeCCCcchhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHH
Confidence 9999999999999999887654 45899999999996 3 46799999999999999999998753
No 380
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-33 Score=303.06 Aligned_cols=202 Identities=31% Similarity=0.532 Sum_probs=182.5
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSN 1027 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~N 1027 (1156)
..++|++|...+++.++|.|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++|+||++.+|++|+++|
T Consensus 15 ~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~n 94 (236)
T cd03253 15 PVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVVPQDTVLFNDTIGYN 94 (236)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEECCCChhhcchHHHH
Confidence 47899999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred cCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHHH
Q 037346 1028 LDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATDN 1088 (1156)
Q Consensus 1028 l~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te~ 1088 (1156)
+.+.. ..+++++.++++.+++.+.+..+|.++++. ||||+++|++|||||||++||+++..
T Consensus 95 l~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~ 174 (236)
T cd03253 95 IRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTER 174 (236)
T ss_pred HhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 97653 345677888899999999888887765531 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHH
Q 037346 1089 QIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAE 1150 (1156)
Q Consensus 1089 ~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~ 1150 (1156)
.+.+.|.+..++.|+|+++|+++.+..||++++|++|++++.|+++++..+ .+.|+.++.+
T Consensus 175 ~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (236)
T cd03253 175 EIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWKA 235 (236)
T ss_pred HHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHhc
Confidence 999999987668899999999999999999999999999999999999874 5777776653
No 381
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-33 Score=339.46 Aligned_cols=192 Identities=24% Similarity=0.394 Sum_probs=159.2
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..++++|+++.|. .+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 264 ~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~ 338 (510)
T PRK09700 264 TVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKK 338 (510)
T ss_pred cEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHC
Confidence 3699999998752 3899999999999999999999999999999999999999999999872
Q ss_pred -EEEEecCC---cCC-CccHHHHhhcCCCC------------CH----HHHHHHHHHhCCc-hhhhhCCCCCccccccCC
Q 037346 423 -KAYVAQSP---WIQ-SGKIEENILFGKEM------------DR----ERYERVLEACSLK-KDLEVLPFGDQTIIGERG 480 (1156)
Q Consensus 423 -~~~v~Q~~---~~~-~~ti~eni~~~~~~------------~~----~~~~~~~~~~~l~-~~~~~~~~g~~t~v~~~g 480 (1156)
++|++|++ .++ +.|++||+.++... .. ++.+++++..++. +. .....
T Consensus 339 ~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~ 407 (510)
T PRK09700 339 GMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHS-----------VNQNI 407 (510)
T ss_pred CcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCC-----------ccCcc
Confidence 69999984 354 45999999875321 11 2234555555553 22 23455
Q ss_pred CCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeE
Q 037346 481 INLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKI 557 (1156)
Q Consensus 481 ~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i 557 (1156)
.+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+.+.. .+|+|+|++||+++.+. .||++++|++|++
T Consensus 408 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i 487 (510)
T PRK09700 408 TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRL 487 (510)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEE
Confidence 78999999999999999999999999999999999999998876643 45899999999999875 5999999999999
Q ss_pred EEccCh
Q 037346 558 TQAGKY 563 (1156)
Q Consensus 558 ~~~g~~ 563 (1156)
+..++.
T Consensus 488 ~~~~~~ 493 (510)
T PRK09700 488 TQILTN 493 (510)
T ss_pred EEEecC
Confidence 987755
No 382
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=100.00 E-value=9.4e-33 Score=277.20 Aligned_cols=141 Identities=32% Similarity=0.473 Sum_probs=129.5
Q ss_pred EEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCCCc
Q 037346 358 IEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQSG 435 (1156)
Q Consensus 358 i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~~~ 435 (1156)
++++|+++.|+. .++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~~~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~~~~~i~~~~~------- 70 (144)
T cd03221 1 IELENLSKTYGG---KLLLKDISLTINPGDRIGLVGRNGAGKSTLLKLIAGELEPDEGIVTWGSTVKIGYFEQ------- 70 (144)
T ss_pred CEEEEEEEEECC---ceEEEeeEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCeEEEEEEcc-------
Confidence 468999999963 4699999999999999999999999999999999999999999999998 4788888
Q ss_pred cHHHHhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCH
Q 037346 436 KIEENILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDD 515 (1156)
Q Consensus 436 ti~eni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~ 515 (1156)
|||||+||++||||++++|+++||||||++||+
T Consensus 71 -----------------------------------------------lS~G~~~rv~laral~~~p~illlDEP~~~LD~ 103 (144)
T cd03221 71 -----------------------------------------------LSGGEKMRLALAKLLLENPNLLLLDEPTNHLDL 103 (144)
T ss_pred -----------------------------------------------CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCH
Confidence 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEEccCCCcccc-CCEEEEEeCCe
Q 037346 516 HTGAHLFKFCWVSSSKTVIYATHQVEFLPA-ADLILVIKDGK 556 (1156)
Q Consensus 516 ~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~ 556 (1156)
.+...+.+.+... ++|+|++||+++.+.. ||++++|++|+
T Consensus 104 ~~~~~l~~~l~~~-~~til~~th~~~~~~~~~d~v~~l~~g~ 144 (144)
T cd03221 104 ESIEALEEALKEY-PGTVILVSHDRYFLDQVATKIIELEDGK 144 (144)
T ss_pred HHHHHHHHHHHHc-CCEEEEEECCHHHHHHhCCEEEEEeCCC
Confidence 9999887765444 5799999999999864 99999999985
No 383
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.7e-33 Score=285.59 Aligned_cols=199 Identities=25% Similarity=0.398 Sum_probs=170.6
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC---------eEEEEe
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG---------TKAYVA 427 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g---------~~~~v~ 427 (1156)
.+++++|+++|+ +..+++|+||++++|++.+++|+||+||||.+++|+|+++|++|+|.++| +|||.|
T Consensus 2 ~L~ie~vtK~Fg---~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLP 78 (300)
T COG4152 2 ALEIEGVTKSFG---DKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLP 78 (300)
T ss_pred ceEEecchhccC---ceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccCh
Confidence 478999999996 56899999999999999999999999999999999999999999999999 689999
Q ss_pred cCCcCC-CccHHHHhhcCCC---CCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhcc
Q 037346 428 QSPWIQ-SGKIEENILFGKE---MDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQ 499 (1156)
Q Consensus 428 Q~~~~~-~~ti~eni~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~ 499 (1156)
.+.-++ ..||.|-+.|-.. ... ++....+++..+... -.++..+||-|.+|+|-+--|+++
T Consensus 79 EERGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~-----------~~~kIk~LSKGnqQKIQfisaviH 147 (300)
T COG4152 79 EERGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGK-----------KTKKIKELSKGNQQKIQFISAVIH 147 (300)
T ss_pred hhhccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcccccc-----------ccchHHHhhhhhhHHHHHHHHHhc
Confidence 999876 4699999987422 222 334445555444321 135667999999999999999999
Q ss_pred CCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHhc
Q 037346 500 DADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 500 ~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
+|+++|||||||+|||.+.+.+-+.++. .+|+|||++||+++.+.. ||++++|++|+.+.+|+.+++...
T Consensus 148 ePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~ 220 (300)
T COG4152 148 EPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRS 220 (300)
T ss_pred CCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHh
Confidence 9999999999999999998877666654 579999999999999975 999999999999999999988753
No 384
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5.2e-33 Score=271.13 Aligned_cols=192 Identities=22% Similarity=0.350 Sum_probs=167.5
Q ss_pred EEEEEEEEEE-----------cCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccc
Q 037346 948 VNIRHLQVRY-----------APNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQD 1016 (1156)
Q Consensus 948 I~~~~Vsf~Y-----------~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQd 1016 (1156)
|.+++|.|+| ++++.+++.||||||||||++++.||..|.+|+|.|+|+|....++. ++-+++++||
T Consensus 2 l~L~~V~~~y~~~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSmlFQE 79 (231)
T COG3840 2 LALDDVRFSYGHLPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSMLFQE 79 (231)
T ss_pred ccccceEEeeCcceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhhhhhc
Confidence 3456666666 45677889999999999999999999999999999999999988775 4679999999
Q ss_pred cccccc-cchhccCCCC----CC---CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcC
Q 037346 1017 PTMFEG-TTRSNLDPLE----EH---ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATAS 1081 (1156)
Q Consensus 1017 p~LF~g-TIr~Nl~~~~----~~---~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~ 1081 (1156)
..||.- ||++|+..+- .. ..+.+..|+.++|+.++...+|+.|.-+ ||+|+|+.|||+||||.|+
T Consensus 80 nNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDEPFsA 159 (231)
T COG3840 80 NNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPGELSGGQRQRVALARCLVREQPILLLDEPFSA 159 (231)
T ss_pred cccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCccccCchHHHHHHHHHHHhccCCeEEecCchhh
Confidence 999975 9999997642 12 2466999999999999999999988765 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCC
Q 037346 1082 VDTATDNQIQQTLRQHF--SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKS 1141 (1156)
Q Consensus 1082 LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~ 1141 (1156)
||+.-...+...+.+.. ++.|+++|||.++.+. -+|+++++++|||+..|+-+++++.+.
T Consensus 160 LdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 160 LDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred cCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 99999999888887765 4779999999998765 499999999999999999999997543
No 385
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=5.7e-33 Score=302.46 Aligned_cols=189 Identities=28% Similarity=0.432 Sum_probs=167.5
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcc-----cCCCceEEEcCeeCCCCC--hHHHhhcCeeeccccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIV-----ESTAGHILIDGKDISLIG--LHDLRTRLSIIPQDPTMF 1020 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~-----~p~~G~I~idG~di~~i~--~~~LR~~i~~VpQdp~LF 1020 (1156)
..++|++|...+++.++|.|+||||||||+++|+|++ +|++|+|.++|.++.+.+ ...+|++++++||++.+|
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 93 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNPF 93 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHHhhEEEEecCchhc
Confidence 4799999999999999999999999999999999999 999999999999998877 667889999999999999
Q ss_pred cccchhccCCCC---C-C----CHHHHHHHHHHcCCChHHHhhc--CCcccc-------ccccccCCCEEEEecCCcCCC
Q 037346 1021 EGTTRSNLDPLE---E-H----ADEQIWEALDKCQLGDEVRKKK--GKLDSQ-------GRVLLKKSKVLVLDEATASVD 1083 (1156)
Q Consensus 1021 ~gTIr~Nl~~~~---~-~----~deei~~al~~~~l~~~i~~lp--~gl~s~-------ARALLr~~~ILiLDEaTS~LD 1083 (1156)
..|+++|+.+.. . . .++++.++++.+++.+.....+ ..|..+ ||||+++|++|||||||++||
T Consensus 94 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD 173 (227)
T cd03260 94 PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARALANEPEVLLLDEPTSALD 173 (227)
T ss_pred cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 889999997531 1 1 1356889999999988776663 666554 899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHH
Q 037346 1084 TATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKL 1136 (1156)
Q Consensus 1084 ~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eL 1136 (1156)
+++.+.+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 174 ~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 174 PISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999998865689999999999876 4999999999999999998764
No 386
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=6.1e-33 Score=337.30 Aligned_cols=197 Identities=19% Similarity=0.251 Sum_probs=160.9
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-CCcEEEEcC--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-ESGIIRLCG-------------- 421 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-~~G~i~~~g-------------- 421 (1156)
.++++|+++.|+..++..+|+|+||+|++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 257 ~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~ 336 (500)
T TIGR02633 257 ILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRA 336 (500)
T ss_pred eEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 59999999988422235699999999999999999999999999999999999985 899999987
Q ss_pred eEEEEecCC---cCC-CccHHHHhhcCCC--------CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCH
Q 037346 422 TKAYVAQSP---WIQ-SGKIEENILFGKE--------MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSG 485 (1156)
Q Consensus 422 ~~~~v~Q~~---~~~-~~ti~eni~~~~~--------~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSg 485 (1156)
+++|++|++ .++ +.|++||+.++.. .+ +++.+++++.+++... ........|||
T Consensus 337 ~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSg 406 (500)
T TIGR02633 337 GIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTA----------SPFLPIGRLSG 406 (500)
T ss_pred CCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCC----------CccCccccCCH
Confidence 269999996 344 4699999987521 11 1234556666665321 11234568999
Q ss_pred HHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccC
Q 037346 486 GQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGK 562 (1156)
Q Consensus 486 GqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~ 562 (1156)
|||||++||||++.+|++|||||||++||+.+++.+++.+.. .+|.|+|++||+++.+. .||++++|++|+++..++
T Consensus 407 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~ 486 (500)
T TIGR02633 407 GNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFV 486 (500)
T ss_pred HHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEc
Confidence 999999999999999999999999999999999988775533 45899999999999886 599999999999987665
Q ss_pred h
Q 037346 563 Y 563 (1156)
Q Consensus 563 ~ 563 (1156)
.
T Consensus 487 ~ 487 (500)
T TIGR02633 487 N 487 (500)
T ss_pred c
Confidence 4
No 387
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional
Probab=100.00 E-value=1e-32 Score=296.25 Aligned_cols=183 Identities=18% Similarity=0.205 Sum_probs=149.3
Q ss_pred ccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEE-EcCeEEEEecCCcCCCc-cHHHHhhcCC---CCCH
Q 037346 375 TLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIR-LCGTKAYVAQSPWIQSG-KIEENILFGK---EMDR 449 (1156)
Q Consensus 375 ~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~-~~g~~~~v~Q~~~~~~~-ti~eni~~~~---~~~~ 449 (1156)
+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|. ++|....+.|++.+++. |++||+.+.. ..+.
T Consensus 2 vl~~vs~~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~sG~i~~~~~~~~~~~~~~~l~~~ltv~enl~~~~~~~~~~~ 81 (213)
T PRK15177 2 VLDKTDFVMGYHEHIGILAAPGSGKTTLTRLLCGLDAPDEGDFIGLRGDALPLGANSFILPGLTGEENARMMASLYGLDG 81 (213)
T ss_pred eeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCccCCCCCEEEecCceeccccccccCCcCcHHHHHHHHHHHcCCCH
Confidence 68999999999999999999999999999999999999999997 78765556677777764 9999998642 2233
Q ss_pred HHHHH-HHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh-
Q 037346 450 ERYER-VLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV- 527 (1156)
Q Consensus 450 ~~~~~-~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~- 527 (1156)
++..+ +.+..++... .......||||||||++||||++.+|+++|||||++++|+.+++.+.+.+..
T Consensus 82 ~~~~~~~~~~~~l~~~-----------~~~~~~~lS~G~~qrv~la~al~~~p~llllDEP~~~lD~~~~~~~~~~l~~~ 150 (213)
T PRK15177 82 DEFSHFCYQLTQLEQC-----------YTDRVSEYSVTMKTHLAFAINLLLPCRLYIADGKLYTGDNATQLRMQAALACQ 150 (213)
T ss_pred HHHHHHHHHHhChhHH-----------hhchHhhcCHHHHHHHHHHHHHhcCCCEEEECCCCccCCHHHHHHHHHHHHHH
Confidence 33222 2233333221 1234467999999999999999999999999999999999999888776543
Q ss_pred cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHh
Q 037346 528 SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 528 ~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
.+++|+|++||+++.+. .||++++|++|++++.|+.++...
T Consensus 151 ~~~~~ii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 192 (213)
T PRK15177 151 LQQKGLIVLTHNPRLIKEHCHAFGVLLHGKITMCEDLAQATA 192 (213)
T ss_pred hhCCcEEEEECCHHHHHHhcCeeEEEECCeEEEeCCHHHHHH
Confidence 45689999999999986 599999999999999999887753
No 388
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-33 Score=309.93 Aligned_cols=192 Identities=23% Similarity=0.384 Sum_probs=173.0
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccc--ccccccch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDP--TMFEGTTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp--~LF~gTIr 1025 (1156)
..++||+|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++++|+|+| .++..|++
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~ 100 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVE 100 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHH
Confidence 4799999999999999999999999999999999999999999999999999888888999999999998 35677999
Q ss_pred hccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHH
Q 037346 1026 SNLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1026 ~Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
+||.+.. ..+ ++.+.++++.+++.++....|..|..+ ||||+++|+||||||||++||+.+.+.+.
T Consensus 101 eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~ 180 (279)
T PRK13650 101 DDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELI 180 (279)
T ss_pred HHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHH
Confidence 9997542 122 356889999999999888888777655 89999999999999999999999999999
Q ss_pred HHHHHhcC--CceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1092 QTLRQHFS--DCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1092 ~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 181 ~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 181 KTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99988753 7899999999999888999999999999999999998864
No 389
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.1e-32 Score=333.92 Aligned_cols=200 Identities=24% Similarity=0.304 Sum_probs=166.3
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCC-cC
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSP-WI 432 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~-~~ 432 (1156)
..++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .++|+||++ .+
T Consensus 323 ~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~q~~~~~ 399 (556)
T PRK11819 323 KVIEAENLSKSFG---DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGETVKLAYVDQSRDAL 399 (556)
T ss_pred eEEEEEeEEEEEC---CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCceEEEEEeCchhhc
Confidence 4699999999996 35799999999999999999999999999999999999999999999976 589999997 45
Q ss_pred C-CccHHHHhhcCCCC-----CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeee
Q 037346 433 Q-SGKIEENILFGKEM-----DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLL 506 (1156)
Q Consensus 433 ~-~~ti~eni~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illl 506 (1156)
+ +.|++||+.++... .+.+.+..++.+++..+. ......+||||||||++||||++.+|++|||
T Consensus 400 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG~~qrv~la~al~~~p~lllL 469 (556)
T PRK11819 400 DPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGD----------QQKKVGVLSGGERNRLHLAKTLKQGGNVLLL 469 (556)
T ss_pred CCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhH----------hcCchhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4 45999999876321 123344566666664211 1344578999999999999999999999999
Q ss_pred eCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccc-cCCEEEEEeC-CeEE-EccChHHHHhc
Q 037346 507 DDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLP-AADLILVIKD-GKIT-QAGKYSDILNS 569 (1156)
Q Consensus 507 Dep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~-~~d~i~~l~~-G~i~-~~g~~~~l~~~ 569 (1156)
||||++||+.+...+.+.+.... .|+|+|||+++++. .||+|++|++ |++. ..|+++++.+.
T Consensus 470 DEPt~~LD~~~~~~l~~~l~~~~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 470 DEPTNDLDVETLRALEEALLEFP-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred cCCCCCCCHHHHHHHHHHHHhCC-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 99999999999999988765554 48999999999886 4999999986 7876 68888887654
No 390
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.5e-32 Score=361.87 Aligned_cols=203 Identities=16% Similarity=0.244 Sum_probs=173.9
Q ss_pred CccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe------------
Q 037346 355 DTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------ 422 (1156)
Q Consensus 355 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------ 422 (1156)
+..++++|+++.|+. .++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 1935 ~~~L~v~nLsK~Y~~-~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSG-TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECC-CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHHHHhhh
Confidence 346999999999963 2357999999999999999999999999999999999999999999999882
Q ss_pred EEEEecCCcCCC-ccHHHHhhcCC---CCC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHH
Q 037346 423 KAYVAQSPWIQS-GKIEENILFGK---EMD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIA 494 (1156)
Q Consensus 423 ~~~v~Q~~~~~~-~ti~eni~~~~---~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lA 494 (1156)
+|||||++.++. .|++||+.+.. ... +++.+++++.++|.+..+ ++..+||||||||++||
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~d-----------k~~~~LSGGqKqRLslA 2082 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYAD-----------RLAGTYSGGNKRKLSTA 2082 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhc-----------CChhhCCHHHHHHHHHH
Confidence 799999988775 59999997631 111 234456777788765443 34568999999999999
Q ss_pred HhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 495 RPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 495 ral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
|||+.+|+|++|||||+|||+.+++.+++.+.. .+|+|+|++||+++.+. .||+|++|++|+++..|+++++.++
T Consensus 2083 ~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2083 IALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 999999999999999999999999999886644 45899999999999986 4999999999999999999998653
No 391
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.2e-33 Score=295.21 Aligned_cols=194 Identities=27% Similarity=0.392 Sum_probs=166.4
Q ss_pred CeEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccc-cccccc
Q 037346 946 GEVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPT-MFEGTT 1024 (1156)
Q Consensus 946 g~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~-LF~gTI 1024 (1156)
+...++|+||+.++++-.+|.||||||||||+++|.|+..|.+|+|++||.++.+++.+++-+++|||||++. -|.-|+
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~tV 93 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGLTV 93 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCcEE
Confidence 4567777777777888788889999999999999999999999999999999999999999999999999974 566699
Q ss_pred hhccCCC--------CCCC--HH-HHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHH
Q 037346 1025 RSNLDPL--------EEHA--DE-QIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTAT 1086 (1156)
Q Consensus 1025 r~Nl~~~--------~~~~--de-ei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~t 1086 (1156)
+|=+.++ ...+ |+ .+.+||+.+++.++....=..|..+ ||||.++|+||+||||||+||...
T Consensus 94 ~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~ 173 (258)
T COG1120 94 YELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIARALAQETPILLLDEPTSHLDIAH 173 (258)
T ss_pred eehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHH
Confidence 9877543 1122 33 5889999999998876543333322 899999999999999999999999
Q ss_pred HHHHHHHHHHhc--CCceEEEeecCccc-ccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1087 DNQIQQTLRQHF--SDCTVVTIAHRITS-VLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1087 e~~I~~~l~~~~--~~~TvI~IaHrl~t-i~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
.-.|++.++++. +++|+|+|.|+++. .+.||++++|++|+|+..|+|+|.+..
T Consensus 174 Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 174 QIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 999999999876 36999999999976 567999999999999999999999853
No 392
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.4e-32 Score=333.67 Aligned_cols=199 Identities=25% Similarity=0.316 Sum_probs=165.0
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCc-C
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPW-I 432 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~-~ 432 (1156)
..++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .++|++|++. +
T Consensus 321 ~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~~~~i~~v~q~~~~~ 397 (552)
T TIGR03719 321 KVIEAENLSKGFG---DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGETVKLAYVDQSRDAL 397 (552)
T ss_pred eEEEEeeEEEEEC---CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECCceEEEEEeCCcccc
Confidence 4699999999996 35799999999999999999999999999999999999999999999966 5899999973 4
Q ss_pred C-CccHHHHhhcCCC---CC--HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeee
Q 037346 433 Q-SGKIEENILFGKE---MD--RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLL 506 (1156)
Q Consensus 433 ~-~~ti~eni~~~~~---~~--~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illl 506 (1156)
+ ..|++||+.++.. .. +.+.+++++.+++.... ......+||||||||++||||++.+|++|||
T Consensus 398 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgGe~qrv~la~al~~~p~lllL 467 (552)
T TIGR03719 398 DPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSD----------QQKKVGQLSGGERNRVHLAKTLKSGGNVLLL 467 (552)
T ss_pred CCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhH----------hcCchhhCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 4 4599999988642 11 23344566666664221 1244578999999999999999999999999
Q ss_pred eCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccc-cCCEEEEEeC-CeEE-EccChHHHHh
Q 037346 507 DDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLP-AADLILVIKD-GKIT-QAGKYSDILN 568 (1156)
Q Consensus 507 Dep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~-~~d~i~~l~~-G~i~-~~g~~~~l~~ 568 (1156)
||||++||+.+.+.+.+.+.... .|+|+|||+++++. .||+|++|++ |++. ..|+++++.+
T Consensus 468 DEPt~~LD~~~~~~l~~~l~~~~-~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 468 DEPTNDLDVETLRALEEALLEFA-GCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred eCCCCCCCHHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 99999999999999987765554 48999999999986 4999999987 5775 6788876654
No 393
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-32 Score=295.33 Aligned_cols=194 Identities=26% Similarity=0.428 Sum_probs=172.7
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCC-CCChHHHhhcCeeecccc--cccccc
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDIS-LIGLHDLRTRLSIIPQDP--TMFEGT 1023 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~~~~LR~~i~~VpQdp--~LF~gT 1023 (1156)
...++||+|...+++.++|.|+||||||||+++|.|++.|++|.|.+||.+++ ..+...+|+++|+|+|+| ++|..|
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~t 96 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPT 96 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceEEEEECcccccccCc
Confidence 45677777777777777888999999999999999999999999999999999 488999999999999999 799999
Q ss_pred chhccCCCCC---CC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHH
Q 037346 1024 TRSNLDPLEE---HA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQ 1089 (1156)
Q Consensus 1024 Ir~Nl~~~~~---~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~ 1089 (1156)
|.+.+.++.. .+ ++.+.++|+.+++.++....|..|.-+ |.+|..+|+|||||||||+||++..+.
T Consensus 97 V~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~ 176 (235)
T COG1122 97 VEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRE 176 (235)
T ss_pred HHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHH
Confidence 9999987532 23 345889999999999977777766644 789999999999999999999999999
Q ss_pred HHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCC
Q 037346 1090 IQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENK 1140 (1156)
Q Consensus 1090 I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~ 1140 (1156)
+.+.++++.+ ++|+|+|||+++.+.. |||++||++|+++.+|+|++++++.
T Consensus 177 l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 177 LLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 9999999864 4799999999999988 9999999999999999999999753
No 394
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-30 Score=281.76 Aligned_cols=405 Identities=19% Similarity=0.251 Sum_probs=278.7
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccccccchhhhhcccccccchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037346 712 AGYKTATQLFNKMHVCIFRAPMYFFDSTPSGRILNRVSENVKWADQSAADMDIPYDIGAFAFSMIQLLGIIVVMSLVAWQ 791 (1156)
Q Consensus 712 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~il~R~s~d~~~~d~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1156)
+|.+...++|.++.++++.+|+.-+++-..++++.+++ .|+..+. .--..+..++++.+..+++.+.+++.+++
T Consensus 75 ~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~-----~Dvr~IS-f~~s~lp~~~qa~il~l~s~aYLayLSp~ 148 (546)
T COG4615 75 LGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLT-----SDVRNIS-FAFSRLPELVQAIILTLGSAAYLAYLSPK 148 (546)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhc-----cccccee-ehHhhhHHHHHHHHHHHHHHHHHHHhhHH
Confidence 57788999999999999999999999999999999999 4544443 22234556778888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhChHHHHHHhhccchhhhhhcchHHH--HHHHHHHHHHH----HhhH
Q 037346 792 VLIVFVPVIATFIWYQQYYITSTRELSRLIGVCKAPVIQQFSETISGSTTIRSLDQELR--FRDTNMKLIDE----YSRP 865 (1156)
Q Consensus 792 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~l~Gi~tIra~~~e~~--~~~~~~~~~~~----~~~~ 865 (1156)
++++++..+++.++.....+....+-.+...+....++.+.+..++|.+..+....-.+ +.+.+...-.. ....
T Consensus 149 mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~~~~~~ 228 (546)
T COG4615 149 MFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRHHIIRA 228 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHhhhhhh
Confidence 98777666655555444333333333333444556788999999999999887653322 22222211111 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHcCCCccchHHHHHHHhHHHHHHHHhhcCCCC
Q 037346 866 KFHIAGAMEWLRFCIDMLSSIT-----------------FAFSLAFLISVPNGIIHPYKNLERKIISVERILQCACIPSE 928 (1156)
Q Consensus 866 ~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~Ri~~~~~~~~e 928 (1156)
.........|....+-.+..++ ++.++.++-.+....++....+..+.++.++|.++...|..
T Consensus 229 n~f~~la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~ 308 (546)
T COG4615 229 NTFHLLAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYK 308 (546)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCcc
Confidence 1111123334333221111111 11112222222223334446677788899999886543222
Q ss_pred CcccccCCCCCCCCCCCCeEEEEEEEEEEcCCC----C----------ceeeCCCCCCHHHHHHHHhhcccCCCceEEEc
Q 037346 929 PALVIEATKPNNSRPSHGEVNIRHLQVRYAPNL----P----------LVLRGRTGSGKSTLIQTLFRIVESTAGHILID 994 (1156)
Q Consensus 929 ~~~~~~~~~~~~~~p~~g~I~~~~Vsf~Y~~~~----~----------~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~id 994 (1156)
.. .....+.++| ..++++||.|.|.+.. | +-|.|.+||||||++++|.|+|.|++|+|++|
T Consensus 309 a~--~~~~q~~p~~---~~lelrnvrfay~~~~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ld 383 (546)
T COG4615 309 AD--FPRPQAFPDW---KTLELRNVRFAYQDNAFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLD 383 (546)
T ss_pred cc--CCCCCcCCcc---cceeeeeeeeccCcccceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeEC
Confidence 11 1122223335 4699999999997652 2 22459999999999999999999999999999
Q ss_pred CeeCCCCChHHHhhcCeeeccccccccccchhccCCCCCCCHHHHHHHHHHcCCChHHHhh-----cCCccccc------
Q 037346 995 GKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSNLDPLEEHADEQIWEALDKCQLGDEVRKK-----KGKLDSQG------ 1063 (1156)
Q Consensus 995 G~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~Nl~~~~~~~deei~~al~~~~l~~~i~~l-----p~gl~s~A------ 1063 (1156)
|.+++.=+++++|+-++-|+-|-+||+.++ -+.+..+.+.+..-|++..+.....-. |-++.|+-
T Consensus 384 g~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~LqrLel~~ktsl~d~~fs~~kLStGQkKRlAl 459 (546)
T COG4615 384 GKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWLQRLELAHKTSLNDGRFSNLKLSTGQKKRLAL 459 (546)
T ss_pred CccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHHHHHHHhhhhcccCCcccccccccchHHHHHH
Confidence 999999999999999999999999999875 222335666676666666554333211 23455553
Q ss_pred -cccccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc--CCceEEEeecCcccccccCEEEEEeCcEEeeec
Q 037346 1064 -RVLLKKSKVLVLDEATASVDTATDNQIQQTLRQHF--SDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYD 1131 (1156)
Q Consensus 1064 -RALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G 1131 (1156)
-|++-+.+|+++||=-+.-||.=.+...+.+-... .|+|++.|||+-.-...|||++.|++|+++|.-
T Consensus 460 l~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 460 LLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred HHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeecc
Confidence 38899999999999999999999988877654332 499999999999999999999999999999863
No 395
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=333.95 Aligned_cols=194 Identities=21% Similarity=0.321 Sum_probs=160.5
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-------------- 422 (1156)
.++++|+++. .+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+
T Consensus 257 ~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 329 (501)
T PRK11288 257 RLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAG 329 (501)
T ss_pred EEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCC
Confidence 5889999732 4899999999999999999999999999999999999999999999873
Q ss_pred EEEEecCCc---CC-CccHHHHhhcCCCC---------C----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCH
Q 037346 423 KAYVAQSPW---IQ-SGKIEENILFGKEM---------D----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSG 485 (1156)
Q Consensus 423 ~~~v~Q~~~---~~-~~ti~eni~~~~~~---------~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSg 485 (1156)
++|++|+|. ++ ..|+.||+.++... . +++.++.++.+++..+ .......+|||
T Consensus 330 i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSg 399 (501)
T PRK11288 330 IMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTP----------SREQLIMNLSG 399 (501)
T ss_pred CEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccC----------CccCccccCCH
Confidence 589999972 44 57999999875310 1 1234455666665311 12345578999
Q ss_pred HHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccC
Q 037346 486 GQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGK 562 (1156)
Q Consensus 486 GqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~ 562 (1156)
|||||++||||++.+|++|||||||++||+.+.+.+.+.+.. ..|.|+|++|||++.+. .||++++|++|+++..|+
T Consensus 400 Gq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~ 479 (501)
T PRK11288 400 GNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELA 479 (501)
T ss_pred HHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEc
Confidence 999999999999999999999999999999999999876533 45889999999999985 599999999999999998
Q ss_pred hHHHH
Q 037346 563 YSDIL 567 (1156)
Q Consensus 563 ~~~l~ 567 (1156)
.+++.
T Consensus 480 ~~~~~ 484 (501)
T PRK11288 480 REQAT 484 (501)
T ss_pred cccCC
Confidence 87643
No 396
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-32 Score=312.86 Aligned_cols=190 Identities=22% Similarity=0.331 Sum_probs=157.6
Q ss_pred EEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCC----------------ChHHHhhcCeee
Q 037346 950 IRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLI----------------GLHDLRTRLSII 1013 (1156)
Q Consensus 950 ~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i----------------~~~~LR~~i~~V 1013 (1156)
++||+|...+++.++|.|+||||||||+++|+|+++|++|+|.+||+++.+. +...+|+++++|
T Consensus 42 L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v 121 (320)
T PRK13631 42 LNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVSMV 121 (320)
T ss_pred eeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccccccccccccchHHHHHhcEEEE
Confidence 3444444444444567799999999999999999999999999999998753 356789999999
Q ss_pred cccc--ccccccchhccCCCC---CCCH----HHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEe
Q 037346 1014 PQDP--TMFEGTTRSNLDPLE---EHAD----EQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLD 1076 (1156)
Q Consensus 1014 pQdp--~LF~gTIr~Nl~~~~---~~~d----eei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLD 1076 (1156)
+|+| .+|++|+++|+.++. ..++ +.+.++++.+++. ++....|..|..+ ||||+++|+|||||
T Consensus 122 ~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLD 201 (320)
T PRK13631 122 FQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLSGGQKRRVAIAGILAIQPEILIFD 201 (320)
T ss_pred EECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 9998 699999999997542 1222 3466789999996 5666666666544 89999999999999
Q ss_pred cCCcCCCHHHHHHHHHHHHHhc-CCceEEEeecCcccc-cccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1077 EATASVDTATDNQIQQTLRQHF-SDCTVVTIAHRITSV-LDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1077 EaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti-~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
|||++||+.+...+.+.|++.. +++|||+|||+++.+ ..||+|+||++|+|++.|+|++++.+
T Consensus 202 EPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 202 EPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKILKTGTPYEIFTD 266 (320)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999998763 578999999999987 56999999999999999999987653
No 397
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.2e-32 Score=293.34 Aligned_cols=196 Identities=24% Similarity=0.341 Sum_probs=134.8
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCC---CCCCCcEEEEcCeEEEEecCCcCC
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGG---VPKESGIIRLCGTKAYVAQSPWIQ 433 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~---~~~~~G~i~~~g~~~~v~Q~~~~~ 433 (1156)
.|.++|.+.+-. ++..+.|.||.|-.|..+++|||||-||||||+-|..- +||. =.+-||.|+...-
T Consensus 264 DIKiEnF~ISA~---Gk~LFvnA~L~Iv~GRRYGLVGPNG~GKTTLLkHIa~RalaIPpn-------IDvLlCEQEvvad 333 (807)
T KOG0066|consen 264 DIKIENFDISAQ---GKLLFVNASLTIVYGRRYGLVGPNGMGKTTLLKHIAARALAIPPN-------IDVLLCEQEVVAD 333 (807)
T ss_pred cceeeeeeeecc---cceeeeccceEEEecceecccCCCCCchHHHHHHHHhhhccCCCC-------CceEeeeeeeeec
Confidence 377777776653 45788999999999999999999999999999998743 2331 1246777775543
Q ss_pred CccHHHHhh---------------------cCCCCCHHHHHHHHH---HhCCch-------hhhhCCCCCccccccCC-C
Q 037346 434 SGKIEENIL---------------------FGKEMDRERYERVLE---ACSLKK-------DLEVLPFGDQTIIGERG-I 481 (1156)
Q Consensus 434 ~~ti~eni~---------------------~~~~~~~~~~~~~~~---~~~l~~-------~~~~~~~g~~t~v~~~g-~ 481 (1156)
+.|--+-|+ -|.....++.+++.+ +.+... .+. ..|...++.+++ .
T Consensus 334 ~t~Ai~tvl~aD~kRl~lLeee~~L~~q~e~Gd~taaErl~~v~~ELraiGA~sAEarARRILA--GLGFskEMQ~rPt~ 411 (807)
T KOG0066|consen 334 STSAIDTVLKADKKRLALLEEEAKLMSQIEEGDTTAAERLKEVADELRAIGADSAEARARRILA--GLGFSKEMQERPTT 411 (807)
T ss_pred CcHHHHHHHHhhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHhccccchhHHHHHHh--hcCCChhHhcCCcc
Confidence 333222222 111111223332221 111110 111 123444444444 4
Q ss_pred CCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCcccc-CCEEEEEeCCeEE-E
Q 037346 482 NLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPA-ADLILVIKDGKIT-Q 559 (1156)
Q Consensus 482 ~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~-~ 559 (1156)
.+|||.|.||+|||||+..|.+|.|||||++||-...-|+-+.+ +-..+|.++|+||-.++.. |..|+.+++.++- +
T Consensus 412 kFSGGWRMRvSLARALflEPTLLMLDEPTNHLDLNAVIWLdNYL-QgWkKTLLIVSHDQgFLD~VCtdIIHLD~qkLhyY 490 (807)
T KOG0066|consen 412 KFSGGWRMRVSLARALFLEPTLLMLDEPTNHLDLNAVIWLDNYL-QGWKKTLLIVSHDQGFLDSVCTDIIHLDNQKLHYY 490 (807)
T ss_pred ccCCceeeehhHHHHHhcCceeeeecCCccccccceeeehhhHH-hhhhheeEEEecccchHHHHHHHHhhhhhhhhhhh
Confidence 69999999999999999999999999999999999887775443 4456899999999999975 9999999988773 5
Q ss_pred ccChHH
Q 037346 560 AGKYSD 565 (1156)
Q Consensus 560 ~g~~~~ 565 (1156)
.|+|.-
T Consensus 491 rGNY~~ 496 (807)
T KOG0066|consen 491 RGNYTL 496 (807)
T ss_pred cchHHH
Confidence 666643
No 398
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.6e-32 Score=299.45 Aligned_cols=201 Identities=30% Similarity=0.534 Sum_probs=178.7
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchh
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRS 1026 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~ 1026 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.++|.++...+...+|++++|+||++.+|..|+++
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~e 95 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFDGTIAE 95 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhhhhHHH
Confidence 35799999999999999999999999999999999999999999999999999888888888999999999999999999
Q ss_pred ccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1027 NLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1027 Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
|+.++. ....+++.+.++..++.+++..+|.++++. ||||+.+|++|||||||++||+.+.
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~ 175 (238)
T cd03249 96 NIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESE 175 (238)
T ss_pred HhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHH
Confidence 998653 234567788888888888888887665431 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcCCCChHHHHH
Q 037346 1088 NQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLV 1148 (1156)
Q Consensus 1088 ~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~ 1148 (1156)
+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++... .+.++.++
T Consensus 176 ~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 235 (238)
T cd03249 176 KLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLV 235 (238)
T ss_pred HHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHh
Confidence 9999999987678999999999999999999999999999999999998864 45555554
No 399
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-32 Score=336.31 Aligned_cols=198 Identities=22% Similarity=0.349 Sum_probs=166.0
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCC--c
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSP--W 431 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~--~ 431 (1156)
..|+++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +++|++|++ .
T Consensus 311 ~~l~~~~l~~~y~---~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~igy~~Q~~~~~ 387 (638)
T PRK10636 311 PLLKMEKVSAGYG---DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEF 387 (638)
T ss_pred ceEEEEeeEEEeC---CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCCEEEEEecCcchhh
Confidence 4699999999996 35799999999999999999999999999999999999999999999974 589999985 2
Q ss_pred CC-CccHHHHhhc-CCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCC
Q 037346 432 IQ-SGKIEENILF-GKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDP 509 (1156)
Q Consensus 432 ~~-~~ti~eni~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep 509 (1156)
+. ..|+.+++.. ......++.+++++.+++..+. +.....+|||||||||+||||++.+|++||||||
T Consensus 388 l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~----------~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEP 457 (638)
T PRK10636 388 LRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDK----------VTEETRRFSGGEKARLVLALIVWQRPNLLLLDEP 457 (638)
T ss_pred CCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhH----------hcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 33 3488888742 2223345667777777774321 1234568999999999999999999999999999
Q ss_pred CCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccc-cCCEEEEEeCCeEE-EccChHHHH
Q 037346 510 FSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLP-AADLILVIKDGKIT-QAGKYSDIL 567 (1156)
Q Consensus 510 ~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~-~~g~~~~l~ 567 (1156)
|++||+.+...+.+.+.... .|||+||||++++. .||+|++|++|+++ +.|+++++.
T Consensus 458 t~~LD~~~~~~l~~~L~~~~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 516 (638)
T PRK10636 458 TNHLDLDMRQALTEALIDFE-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQ 516 (638)
T ss_pred CCCCCHHHHHHHHHHHHHcC-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHH
Confidence 99999999999887765554 49999999999986 49999999999997 789998874
No 400
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=7.4e-30 Score=288.86 Aligned_cols=261 Identities=22% Similarity=0.277 Sum_probs=206.6
Q ss_pred CCccHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--------CC------Ccccc---ccC
Q 037346 291 IPLESGMILSAL----TTFKILQEPIYYLPESISMMIQAKVPLDRIASFLCLE--------GL------QTDVL---EKM 349 (1156)
Q Consensus 291 ~~lt~~~~ft~l----~~~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~--------~~------~~~~~---~~~ 349 (1156)
+.++++..+..+ .++..+...+..+...-..+.+-..-..||.++.+.- +. ..+.. ...
T Consensus 342 ~~~s~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~ 421 (659)
T KOG0060|consen 342 DDLSPAELSGLISNNAFVFIYLISAFGRLVDLSRDLSRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLP 421 (659)
T ss_pred CCcCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCC
Confidence 347777776654 3344455666666666666667677778888886421 00 00000 000
Q ss_pred C----CCCCCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEc--C--
Q 037346 350 P----RGNSDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLC--G-- 421 (1156)
Q Consensus 350 ~----~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~--g-- 421 (1156)
+ ....+..|++++|++.-|++ +..+.+|+||+|+.|+.+.|+||||||||+|++.+.|+.+..+|++... |
T Consensus 422 ~G~~~~~~~Dn~i~~e~v~l~tPt~-g~~lie~Ls~~V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~~ 500 (659)
T KOG0060|consen 422 PGSGKAEPADNAIEFEEVSLSTPTN-GDLLIENLSLEVPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGGP 500 (659)
T ss_pred CCCcccccccceEEeeeeeecCCCC-CceeeeeeeeEecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCCC
Confidence 0 11235689999999999865 4567788999999999999999999999999999999999999999864 3
Q ss_pred -eEEEEecCCcCCCccHHHHhhcCC--------CCCHHHHHHHHHHhCCchhhhhCCCCCcc-ccccCCCCCCHHHHHHH
Q 037346 422 -TKAYVAQSPWIQSGKIEENILFGK--------EMDRERYERVLEACSLKKDLEVLPFGDQT-IIGERGINLSGGQKQRI 491 (1156)
Q Consensus 422 -~~~~v~Q~~~~~~~ti~eni~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~g~~t-~v~~~g~~LSgGqkqRi 491 (1156)
.+-|+||.|.+..||+||-+.+.. ..+++++.+.++.++|.+.++... |.++ .+-+-...||+||+||+
T Consensus 501 ~~lfflPQrPYmt~GTLRdQvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~~r~g-gld~~~~~dW~dvLS~GEqQRL 579 (659)
T KOG0060|consen 501 KDLFFLPQRPYMTLGTLRDQVIYPLKAEDMDSKSASDEDILRILENVQLGHLLEREG-GLDQQVDWDWMDVLSPGEQQRL 579 (659)
T ss_pred CceEEecCCCCccccchhheeeccCccccccccCCCHHHHHHHHHHhhhhhHHHHhC-CCCchhhccHHhhcCHHHHHHH
Confidence 378999999999999999999972 246788999999999988776654 5554 44566789999999999
Q ss_pred HHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccccCCEEEEEeC
Q 037346 492 QIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPAADLILVIKD 554 (1156)
Q Consensus 492 ~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~~d~i~~l~~ 554 (1156)
|+||-+|++|++-+|||.|||||.+++..+++.|. ..|.|.|-|.||.++.+.-|.++-|+.
T Consensus 580 a~ARLfy~kPk~AiLDE~TSAv~~dvE~~~Yr~~r-~~giT~iSVgHRkSL~kfHd~~L~~~g 641 (659)
T KOG0060|consen 580 AFARLFYHKPKFAILDECTSAVTEDVEGALYRKCR-EMGITFISVGHRKSLWKFHDYVLRMDG 641 (659)
T ss_pred HHHHHHhcCCceEEeechhhhccHHHHHHHHHHHH-HcCCeEEEeccHHHHHhhhhEEEEecC
Confidence 99999999999999999999999999999998874 458999999999999998999999985
No 401
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=315.73 Aligned_cols=195 Identities=23% Similarity=0.380 Sum_probs=171.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~ 1026 (1156)
..++|++|..++++.++|.||||||||||+++|.|+++|++|+|.+||.++.+.+.+ |+++++|+|++.||.. |+++
T Consensus 20 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig~vfQ~~~lfp~~tv~e 97 (351)
T PRK11432 20 TVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDICMVFQSYALFPHMSLGE 97 (351)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEEEEeCCcccCCCCCHHH
Confidence 357888888888888899999999999999999999999999999999999987654 5789999999999975 9999
Q ss_pred ccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.+.- ..+ ++++.++++.+++.++....|..|..+ ||||+++|+|||||||||+||+.+...+.+
T Consensus 98 Ni~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~ 177 (351)
T PRK11432 98 NVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRE 177 (351)
T ss_pred HHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHH
Confidence 997531 112 457889999999998888888877655 899999999999999999999999999999
Q ss_pred HHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1093 TLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1093 ~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
.|+++.+ +.|+|+|||+++.+. -||+|+||++|+|++.|+|+++..++...|
T Consensus 178 ~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~ 232 (351)
T PRK11432 178 KIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRF 232 (351)
T ss_pred HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchH
Confidence 9988754 789999999999875 599999999999999999999998776544
No 402
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-32 Score=305.05 Aligned_cols=200 Identities=26% Similarity=0.412 Sum_probs=174.2
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHH----hhcCeeecccccccc-
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDL----RTRLSIIPQDPTMFE- 1021 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~L----R~~i~~VpQdp~LF~- 1021 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+...+ +++++++||++.+|.
T Consensus 37 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 116 (269)
T cd03294 37 TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPH 116 (269)
T ss_pred ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCC
Confidence 346999999999999999999999999999999999999999999999999988776554 467999999999885
Q ss_pred ccchhccCCC---CCC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1022 GTTRSNLDPL---EEH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1022 gTIr~Nl~~~---~~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
.|+++|+.+. ... .++++.++++.+++.+++...|..|..+ ||||+++|+||||||||++||+.+.
T Consensus 117 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~ 196 (269)
T cd03294 117 RTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIR 196 (269)
T ss_pred CcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHH
Confidence 6999999642 111 1356889999999999888888888765 8999999999999999999999999
Q ss_pred HHHHHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChHHH
Q 037346 1088 NQIQQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQ 1146 (1156)
Q Consensus 1088 ~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~ 1146 (1156)
+.+.+.|+++.+ ++|+|++||+++.+. -||+|++|++|++++.|+++++++++...|.+
T Consensus 197 ~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~~ 258 (269)
T cd03294 197 REMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYVR 258 (269)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcHHHH
Confidence 999999988743 789999999999875 59999999999999999999998765554543
No 403
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-32 Score=298.43 Aligned_cols=192 Identities=32% Similarity=0.515 Sum_probs=173.6
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchhc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRSN 1027 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~N 1027 (1156)
..++|++|+.++++.++|.|+||||||||+++|+|+++|.+|+|.+||.++.+.+...+|++++|+||++.+|.+|+++|
T Consensus 17 ~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~~~ 96 (229)
T cd03254 17 PVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGVVLQDTFLFSGTIMEN 96 (229)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEEecCCchhhhhHHHHH
Confidence 36888888888888888999999999999999999999999999999999998888889999999999999999999999
Q ss_pred cCCCCC-CCHHHHHHHHHHcCCChHHHhhcCCcccc------------------ccccccCCCEEEEecCCcCCCHHHHH
Q 037346 1028 LDPLEE-HADEQIWEALDKCQLGDEVRKKKGKLDSQ------------------GRVLLKKSKVLVLDEATASVDTATDN 1088 (1156)
Q Consensus 1028 l~~~~~-~~deei~~al~~~~l~~~i~~lp~gl~s~------------------ARALLr~~~ILiLDEaTS~LD~~te~ 1088 (1156)
+.+... ..++++.++++.+++.+++..+|.|+++. ||||+++|++|||||||++||+.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~ 176 (229)
T cd03254 97 IRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEK 176 (229)
T ss_pred HhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHH
Confidence 986543 34677888899999988888877555421 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1089 QIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1089 ~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 177 ~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 177 LIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred HHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999988778999999999999999999999999999999999888764
No 404
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=333.18 Aligned_cols=193 Identities=20% Similarity=0.372 Sum_probs=160.1
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG-------------- 421 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g-------------- 421 (1156)
..++++|+++ ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 256 ~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~ 327 (501)
T PRK10762 256 VRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLAN 327 (501)
T ss_pred cEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHC
Confidence 3589999873 369999999999999999999999999999999999999999999987
Q ss_pred eEEEEecCC---cCC-CccHHHHhhcCCC---------CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCC
Q 037346 422 TKAYVAQSP---WIQ-SGKIEENILFGKE---------MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLS 484 (1156)
Q Consensus 422 ~~~~v~Q~~---~~~-~~ti~eni~~~~~---------~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LS 484 (1156)
.++|++|+| .++ ..|++||+.++.. .+ +++.+++++.+++... ...+...+||
T Consensus 328 ~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS 397 (501)
T PRK10762 328 GIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTP----------SMEQAIGLLS 397 (501)
T ss_pred CCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCC----------CccCchhhCC
Confidence 279999997 344 4699999987421 11 1234556666665311 1234567899
Q ss_pred HHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 485 GGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 485 gGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
||||||++||||++.+|++|||||||++||+.+++.+.+.+.. .+|+|+|++||+++.+. .||+|++|++|+++..|
T Consensus 398 gGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~ 477 (501)
T PRK10762 398 GGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEF 477 (501)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEe
Confidence 9999999999999999999999999999999999998876644 35889999999999875 59999999999999988
Q ss_pred ChHHH
Q 037346 562 KYSDI 566 (1156)
Q Consensus 562 ~~~~l 566 (1156)
+.+++
T Consensus 478 ~~~~~ 482 (501)
T PRK10762 478 TREQA 482 (501)
T ss_pred ccccC
Confidence 87654
No 405
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-32 Score=315.08 Aligned_cols=199 Identities=23% Similarity=0.355 Sum_probs=174.1
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHH---HhhcCeeecccccccc-c
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHD---LRTRLSIIPQDPTMFE-G 1022 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---LR~~i~~VpQdp~LF~-g 1022 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++..++..+ +|++|+||||++.+|. .
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~ 97 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSR 97 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCC
Confidence 35799999999999999999999999999999999999999999999999999887654 4789999999999986 6
Q ss_pred cchhccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHH
Q 037346 1023 TTRSNLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDN 1088 (1156)
Q Consensus 1023 TIr~Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~ 1088 (1156)
|+++|+.+.. ..+ ++++.++++.+++.++....|..|..+ ||||+++|+||||||||++||+.+..
T Consensus 98 tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~ 177 (343)
T PRK11153 98 TVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTR 177 (343)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHH
Confidence 9999996421 122 346788999999998888777777655 89999999999999999999999999
Q ss_pred HHHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHH
Q 037346 1089 QIQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFA 1145 (1156)
Q Consensus 1089 ~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~ 1145 (1156)
.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++...+.
T Consensus 178 ~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~ 237 (343)
T PRK11153 178 SILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKHPLT 237 (343)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCcHHH
Confidence 99999998753 7899999999999875 999999999999999999999876544333
No 406
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-32 Score=313.92 Aligned_cols=196 Identities=21% Similarity=0.357 Sum_probs=173.1
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccccccc-ccchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFE-GTTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~-gTIr~ 1026 (1156)
-.++|++|...+++.++|.||||||||||+++|+|+.+|++|+|.+||.++.+++.. ++.|+||||++.+|. .|+++
T Consensus 18 ~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig~v~Q~~~lfp~~tv~e 95 (356)
T PRK11650 18 QVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIAMVFQNYALYPHMSVRE 95 (356)
T ss_pred EEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEEEEeCCccccCCCCHHH
Confidence 478899999998988899999999999999999999999999999999999988765 478999999999996 59999
Q ss_pred ccCCCCC---CC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLEE---HA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~~---~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
||.+.-. .+ ++++.++++.+++.++....|..|..+ ||||+++|+|||||||||+||+.+.+.+.+
T Consensus 96 Ni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~ 175 (356)
T PRK11650 96 NMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRL 175 (356)
T ss_pred HHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH
Confidence 9975321 22 356789999999999998888888765 899999999999999999999999999999
Q ss_pred HHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChHH
Q 037346 1093 TLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSFA 1145 (1156)
Q Consensus 1093 ~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~ 1145 (1156)
.|++..+ +.|+|+|||+++.+. -||+|++|++|+|++.|+|++++.++...|.
T Consensus 176 ~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (356)
T PRK11650 176 EIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPASTFV 231 (356)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCccHHH
Confidence 9988654 789999999998765 5999999999999999999999987655443
No 407
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=99.98 E-value=1.6e-32 Score=315.10 Aligned_cols=200 Identities=21% Similarity=0.304 Sum_probs=174.0
Q ss_pred CeEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCe----eCCCCChHHHh----hcCeeecccc
Q 037346 946 GEVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGK----DISLIGLHDLR----TRLSIIPQDP 1017 (1156)
Q Consensus 946 g~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~----di~~i~~~~LR----~~i~~VpQdp 1017 (1156)
+...++|+||...+++.++|.|+||||||||+++|.|+++|++|+|++||. ++...+.+.+| ++|+||+|++
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 456899999999999999999999999999999999999999999999996 67777766553 5799999999
Q ss_pred cccc-ccchhccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCC
Q 037346 1018 TMFE-GTTRSNLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASV 1082 (1156)
Q Consensus 1018 ~LF~-gTIr~Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~L 1082 (1156)
.+|. .|+++|+.++. ... .+.+.++++.++|.++....|..|..+ ||||+++|+|||||||||+|
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~L 195 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSAL 195 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccC
Confidence 9997 69999997431 112 245789999999998888877777655 89999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcC--CceEEEeecCcccc-cccCEEEEEeCcEEeeecChhHHhcCCCChHH
Q 037346 1083 DTATDNQIQQTLRQHFS--DCTVVTIAHRITSV-LDSAMVLLLNHGLIKEYDSPTKLLENKSSSFA 1145 (1156)
Q Consensus 1083 D~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti-~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~ 1145 (1156)
|+.+...+++.|.++.+ ++|+|+|||+++.+ ..||+|++|++|++++.|++++++.++...|.
T Consensus 196 D~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~ 261 (382)
T TIGR03415 196 DPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYV 261 (382)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHH
Confidence 99999999999988753 78999999999987 55999999999999999999999976555444
No 408
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=3.8e-32 Score=299.35 Aligned_cols=195 Identities=22% Similarity=0.373 Sum_probs=169.6
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhccc---CCCceEEEcCeeCCCCChHHHhhcCeeecccccccccc
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVE---STAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGT 1023 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gT 1023 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++ |++|+|.+||.++.+.+...+|+.++|+||+|.+|..|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~~t 94 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKS 94 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccccc
Confidence 347899999999999999999999999999999999985 69999999999999988888999999999999999999
Q ss_pred chhccCCCC---C------CCHHHHHHHHHHcCCChHHHh----hcCCcccc-------ccccccCCCEEEEecCCcCCC
Q 037346 1024 TRSNLDPLE---E------HADEQIWEALDKCQLGDEVRK----KKGKLDSQ-------GRVLLKKSKVLVLDEATASVD 1083 (1156)
Q Consensus 1024 Ir~Nl~~~~---~------~~deei~~al~~~~l~~~i~~----lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD 1083 (1156)
+++|+.++. . ..++++.++++.+++.+++.. .+..|..+ ||||+++|+||||||||++||
T Consensus 95 v~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD 174 (246)
T PRK14269 95 IYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALD 174 (246)
T ss_pred HHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 999997531 1 123467889999999765432 23334433 899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCC
Q 037346 1084 TATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKS 1141 (1156)
Q Consensus 1084 ~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~ 1141 (1156)
+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++...+.
T Consensus 175 ~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 233 (246)
T PRK14269 175 PISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENPK 233 (246)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCCC
Confidence 9999999999998877899999999999875 599999999999999999999986543
No 409
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.5e-32 Score=306.72 Aligned_cols=190 Identities=22% Similarity=0.284 Sum_probs=170.4
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccc--ccccccch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDP--TMFEGTTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp--~LF~gTIr 1025 (1156)
-.++|++|...+|+.++|.|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++||||+| .+|..|++
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~ 98 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVW 98 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHH
Confidence 4789999999999999999999999999999999999999999999999999888888999999999998 68889999
Q ss_pred hccCCCCC---CC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHH
Q 037346 1026 SNLDPLEE---HA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1026 ~Nl~~~~~---~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
+|+.+... .. ++++.++++.+++.+.....|..|..+ ||||+++|++|||||||++||+.+...+.
T Consensus 99 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~ 178 (274)
T PRK13647 99 DDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLM 178 (274)
T ss_pred HHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHH
Confidence 99975321 11 356889999999998888888877755 89999999999999999999999999999
Q ss_pred HHHHHhc-CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHh
Q 037346 1092 QTLRQHF-SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLL 1137 (1156)
Q Consensus 1092 ~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl 1137 (1156)
+.|++.. +++|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 179 ~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 179 EILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9998874 4789999999999984 59999999999999999987643
No 410
>PLN03073 ABC transporter F family; Provisional
Probab=99.98 E-value=6.9e-32 Score=334.52 Aligned_cols=198 Identities=24% Similarity=0.339 Sum_probs=164.1
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCcCC
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPWIQ 433 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~~~ 433 (1156)
..++++|+++.|+. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +++|++|++. .
T Consensus 507 ~~L~~~~ls~~y~~--~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~~~~igyv~Q~~~-~ 583 (718)
T PLN03073 507 PIISFSDASFGYPG--GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSAKVRMAVFSQHHV-D 583 (718)
T ss_pred ceEEEEeeEEEeCC--CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECCceeEEEEecccc-c
Confidence 46999999999952 34699999999999999999999999999999999999999999999986 5899999873 2
Q ss_pred CccHHHHhhc-----CCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeC
Q 037346 434 SGKIEENILF-----GKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDD 508 (1156)
Q Consensus 434 ~~ti~eni~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDe 508 (1156)
..++.+|..+ .....+++++++++.+++..+.. ...+.+||||||||++||||++.+|++|||||
T Consensus 584 ~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~----------~~~~~~LSgGqkqRvaLAraL~~~p~lLLLDE 653 (718)
T PLN03073 584 GLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLA----------LQPMYTLSGGQKSRVAFAKITFKKPHILLLDE 653 (718)
T ss_pred cCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHh----------cCCccccCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 2345555321 11234667788888888864322 23457899999999999999999999999999
Q ss_pred CCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCcccc-CCEEEEEeCCeEE-EccChHHHH
Q 037346 509 PFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLPA-ADLILVIKDGKIT-QAGKYSDIL 567 (1156)
Q Consensus 509 p~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~-~~g~~~~l~ 567 (1156)
||++||+.+.+.+.+.+.... .|+|+|||+++++.. ||++++|++|+++ +.|+++++.
T Consensus 654 PT~~LD~~s~~~l~~~L~~~~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 654 PSNHLDLDAVEALIQGLVLFQ-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred CCCCCCHHHHHHHHHHHHHcC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999998877654444 499999999999874 9999999999998 788887654
No 411
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.4e-32 Score=305.64 Aligned_cols=192 Identities=23% Similarity=0.358 Sum_probs=172.4
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccc--ccccccch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDP--TMFEGTTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp--~LF~gTIr 1025 (1156)
..++||+|...+|+.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.|+|+||+| .+++.|++
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 100 (279)
T PRK13635 21 YALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGATVQ 100 (279)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccccHH
Confidence 4788888888888888999999999999999999999999999999999999888888899999999998 46678999
Q ss_pred hccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHH
Q 037346 1026 SNLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1026 ~Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
+||.+.. ..+ ++++.++++.++|.+++...|..|..+ ||||+.+|+||||||||++||+.+...+.
T Consensus 101 enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~ 180 (279)
T PRK13635 101 DDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVL 180 (279)
T ss_pred HHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 9997531 112 345888999999999999888888765 89999999999999999999999999999
Q ss_pred HHHHHhcC--CceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1092 QTLRQHFS--DCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1092 ~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 181 ~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 181 ETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99998764 7899999999999999999999999999999999988753
No 412
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.98 E-value=3.9e-32 Score=299.59 Aligned_cols=197 Identities=25% Similarity=0.389 Sum_probs=170.4
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCC-----CceEEEcCeeCCCC--ChHHHhhcCeeeccccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVEST-----AGHILIDGKDISLI--GLHDLRTRLSIIPQDPTMF 1020 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~i--~~~~LR~~i~~VpQdp~LF 1020 (1156)
..++||+|..++++.++|.|+||||||||+++|.|+++|+ +|+|.+||.++... +...+|+.++||||++.+|
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 3689999999999989999999999999999999999998 99999999999763 4567789999999999999
Q ss_pred cccchhccCCC---CC-CC----HHHHHHHHHHcCCC----hHHHhhcCCcccc-------ccccccCCCEEEEecCCcC
Q 037346 1021 EGTTRSNLDPL---EE-HA----DEQIWEALDKCQLG----DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATAS 1081 (1156)
Q Consensus 1021 ~gTIr~Nl~~~---~~-~~----deei~~al~~~~l~----~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~ 1081 (1156)
..|+++|+.+. .. .. ++++.++++.+++. +.....+..|..+ ||||+++|++|||||||++
T Consensus 95 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~ 174 (247)
T TIGR00972 95 PMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIARALAVEPEVLLLDEPTSA 174 (247)
T ss_pred CCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 99999999642 11 11 35678899999998 5555555666544 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1082 VDTATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1082 LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
||+.+...+.+.|++..+++|+|+|+|+++.+. -||+|++|++|++++.|++++++.++...+
T Consensus 175 LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 238 (247)
T TIGR00972 175 LDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFTNPKEKR 238 (247)
T ss_pred CCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCChH
Confidence 999999999999998876789999999999876 499999999999999999999987554444
No 413
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=99.98 E-value=2.3e-32 Score=299.64 Aligned_cols=192 Identities=26% Similarity=0.399 Sum_probs=168.0
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHH-hhcCeeeccccccccc-cch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDL-RTRLSIIPQDPTMFEG-TTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~L-R~~i~~VpQdp~LF~g-TIr 1025 (1156)
..++|++|+..+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+...+ |+.+++|||++.+|.+ |++
T Consensus 14 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~ 93 (236)
T cd03219 14 VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVL 93 (236)
T ss_pred EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHH
Confidence 47899999999999999999999999999999999999999999999999998887664 5679999999999987 999
Q ss_pred hccCCCC----CC-------------CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcC
Q 037346 1026 SNLDPLE----EH-------------ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATAS 1081 (1156)
Q Consensus 1026 ~Nl~~~~----~~-------------~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~ 1081 (1156)
+|+.+.. .. ..+.+.++++..++.+.....+..|..+ ||||+++|++|||||||++
T Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 173 (236)
T cd03219 94 ENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARALATDPKLLLLDEPAAG 173 (236)
T ss_pred HHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9986421 10 1335788999999987776666666544 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc-CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcC
Q 037346 1082 VDTATDNQIQQTLRQHF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1082 LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+|++.|++++++.+
T Consensus 174 LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 174 LNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 99999999999998865 57899999999999865 999999999999999999998754
No 414
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3.3e-32 Score=314.90 Aligned_cols=198 Identities=24% Similarity=0.386 Sum_probs=174.3
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHH----hhcCeeecccccccc-
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDL----RTRLSIIPQDPTMFE- 1021 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~L----R~~i~~VpQdp~LF~- 1021 (1156)
.+.++|++|...+++.++|.|+||||||||+++|.|+++|++|+|.+||.|+.+++...+ |++++||||++.+|.
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~ 120 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPH 120 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCC
Confidence 457999999999999999999999999999999999999999999999999998887654 357999999999996
Q ss_pred ccchhccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1022 GTTRSNLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1022 gTIr~Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
.|+++|+.+.. ... ++++.++++.+++.++....|..|..+ ||||+.+|+|||||||||+||+.+.
T Consensus 121 ~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r 200 (400)
T PRK10070 121 MTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIR 200 (400)
T ss_pred CCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHH
Confidence 49999997421 111 356889999999999888888877755 8999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1088 NQIQQTLRQHF--SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1088 ~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
+.+++.|+++. .++|+|+|||+++.+. .||+|++|++|+|++.|++++++.++...|
T Consensus 201 ~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 201 TEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 99999998864 4789999999999875 599999999999999999999987654433
No 415
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=4.3e-32 Score=297.71 Aligned_cols=193 Identities=22% Similarity=0.336 Sum_probs=167.4
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccccccc-ccch
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFE-GTTR 1025 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~-gTIr 1025 (1156)
...++||+|+..+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+. .|++++||||+|.+|. .|++
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~v~q~~~~~~~~tv~ 92 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGFVFQHYALFRHMTVF 92 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEEEecCCcccCCCCHH
Confidence 347899999999999899999999999999999999999999999999999887654 3678999999999986 5999
Q ss_pred hccCCCCC---C----C----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1026 SNLDPLEE---H----A----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1026 ~Nl~~~~~---~----~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
+|+.+... . . ++++.++++.+++.+.....+..|..+ ||||+++|++|||||||++||+++.
T Consensus 93 e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~ 172 (239)
T cd03296 93 DNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVR 172 (239)
T ss_pred HHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHH
Confidence 99975311 1 1 245778899999988877777777655 8999999999999999999999999
Q ss_pred HHHHHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCC
Q 037346 1088 NQIQQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKS 1141 (1156)
Q Consensus 1088 ~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~ 1141 (1156)
+.+.+.|++..+ ++|||+|||+++.+. .||+|++|++|++++.|+++++.+.+.
T Consensus 173 ~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 229 (239)
T cd03296 173 KELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDHPA 229 (239)
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcCCC
Confidence 999999988753 789999999999865 499999999999999999999986543
No 416
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.98 E-value=2.5e-32 Score=281.81 Aligned_cols=202 Identities=25% Similarity=0.384 Sum_probs=168.9
Q ss_pred EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCC-ChHHHhhcCeeecccccc-c--cccc
Q 037346 949 NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLI-GLHDLRTRLSIIPQDPTM-F--EGTT 1024 (1156)
Q Consensus 949 ~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i-~~~~LR~~i~~VpQdp~L-F--~gTI 1024 (1156)
.++||||...+|+.+.|.|+||||||||.++|+|+.+|++|+|.+||.++... .-+..++.+.+|+|||.- + .-||
T Consensus 22 ~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv 101 (252)
T COG1124 22 ALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRTV 101 (252)
T ss_pred hhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhccceeEEecCCccccCcchhH
Confidence 68999999999999999999999999999999999999999999999766553 344678899999999962 2 1255
Q ss_pred hhcc----CCCC-CCCHHHHHHHHHHcCCCh-HHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHH
Q 037346 1025 RSNL----DPLE-EHADEQIWEALDKCQLGD-EVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1025 r~Nl----~~~~-~~~deei~~al~~~~l~~-~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
++-| .+.+ +...++++++|+.+||.+ +....|..|.-+ ||||.-+|++||||||||+||.-..+.|.
T Consensus 102 ~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~Il 181 (252)
T COG1124 102 GRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQIL 181 (252)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHH
Confidence 5544 3311 123566999999999975 556678776544 89999999999999999999999999999
Q ss_pred HHHHHhcCCc--eEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHHHHHHH
Q 037346 1092 QTLRQHFSDC--TVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVAE 1150 (1156)
Q Consensus 1092 ~~l~~~~~~~--TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~~ 1150 (1156)
+.+.+..+++ |.|+|||+++.+.. ||||+||++|++||.++-+++...+...|.+..-+
T Consensus 182 nlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~~~h~ytr~Ll~ 243 (252)
T COG1124 182 NLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSHPSHPYTRELLE 243 (252)
T ss_pred HHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcCCccHHHHHHHH
Confidence 9998877655 99999999999986 99999999999999999999998756667665543
No 417
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=99.98 E-value=1.8e-32 Score=297.13 Aligned_cols=188 Identities=23% Similarity=0.302 Sum_probs=166.3
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccc-cccchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMF-EGTTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF-~gTIr~ 1026 (1156)
-.++|++|+..+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.... ..+|+++++|||++.+| ..|+++
T Consensus 16 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~v~q~~~~~~~~tv~~ 94 (220)
T cd03263 16 PAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGYCPQFDALFDELTVRE 94 (220)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEEecCcCCccccCCHHH
Confidence 4799999999999999999999999999999999999999999999999987653 67788999999999998 579999
Q ss_pred ccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.+.. ... ++++.++++..++.+.....+..|..+ |||++++|++|||||||++||+.+.+.+.+
T Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~ 174 (220)
T cd03263 95 HLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWD 174 (220)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHH
Confidence 986421 111 356789999999988777666666544 899999999999999999999999999999
Q ss_pred HHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHH
Q 037346 1093 TLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKL 1136 (1156)
Q Consensus 1093 ~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eL 1136 (1156)
.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 175 ~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 175 LILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99988777999999999998865 999999999999999999875
No 418
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=2.6e-32 Score=300.28 Aligned_cols=191 Identities=27% Similarity=0.409 Sum_probs=168.6
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCC---hHHHhhcCeeecccccccc-c
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIG---LHDLRTRLSIIPQDPTMFE-G 1022 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---~~~LR~~i~~VpQdp~LF~-g 1022 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+.++++||++.+|. .
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIERL 93 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccccC
Confidence 34799999999999999999999999999999999999999999999999998877 5678899999999999887 6
Q ss_pred cchhccCCCC---------------CCCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCc
Q 037346 1023 TTRSNLDPLE---------------EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATA 1080 (1156)
Q Consensus 1023 TIr~Nl~~~~---------------~~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS 1080 (1156)
|+++|+.+.. +..++++.++++.+++.+.....+..|..+ ||||+++|+||||||||+
T Consensus 94 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~ 173 (241)
T cd03256 94 SVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAIARALMQQPKLILADEPVA 173 (241)
T ss_pred cHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 9999996321 112356788999999987777666666654 899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc--CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHh
Q 037346 1081 SVDTATDNQIQQTLRQHF--SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLL 1137 (1156)
Q Consensus 1081 ~LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl 1137 (1156)
+||+.+...+.+.|++.. .++|||+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 174 ~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 174 SLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 999999999999999875 3789999999999988 69999999999999999999874
No 419
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=99.98 E-value=3.3e-32 Score=310.45 Aligned_cols=168 Identities=30% Similarity=0.418 Sum_probs=143.9
Q ss_pred EEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------EEEEecCCcCCCc-cHHHHhhcCCC---CC----HHH
Q 037346 391 VCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-----------KAYVAQSPWIQSG-KIEENILFGKE---MD----RER 451 (1156)
Q Consensus 391 ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-----------~~~v~Q~~~~~~~-ti~eni~~~~~---~~----~~~ 451 (1156)
|+||||||||||+++|+|+++|++|+|.++|. ++|++|++.+|.. |++||+.|+.. .. .++
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p~~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~ 80 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQPDSGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMRKVPRAEIKPR 80 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhcCCCHHHHHHH
Confidence 68999999999999999999999999999883 7999999988864 99999998632 12 234
Q ss_pred HHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---c
Q 037346 452 YERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---S 528 (1156)
Q Consensus 452 ~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~---~ 528 (1156)
.+++++.+++.+..+ +...+||||||||++|||||+++|+++||||||++||+.+++.+.+.+.. .
T Consensus 81 ~~~~l~~~~l~~~~~-----------~~~~~LSgGq~qRvalaraL~~~p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~ 149 (325)
T TIGR01187 81 VLEALRLVQLEEFAD-----------RKPHQLSGGQQQRVALARALVFKPKILLLDEPLSALDKKLRDQMQLELKTIQEQ 149 (325)
T ss_pred HHHHHHHcCCcchhc-----------CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh
Confidence 566777777755443 34568999999999999999999999999999999999999998876643 2
Q ss_pred CCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccChHHHHhc
Q 037346 529 SSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKYSDILNS 569 (1156)
Q Consensus 529 ~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~~~ 569 (1156)
.|+|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 150 ~g~tiiivTHd~~e~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 191 (325)
T TIGR01187 150 LGITFVFVTHDQEEAMTMSDRIAIMRKGKIAQIGTPEEIYEE 191 (325)
T ss_pred cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 4899999999998875 5999999999999999999998764
No 420
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=99.98 E-value=6.1e-32 Score=307.70 Aligned_cols=200 Identities=21% Similarity=0.315 Sum_probs=172.6
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHH---HhhcCeeecccc--ccc-
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHD---LRTRLSIIPQDP--TMF- 1020 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---LR~~i~~VpQdp--~LF- 1020 (1156)
...++||||...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+++.++ +|++|+||+|+| .||
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p 113 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNP 113 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCC
Confidence 34799999999999999999999999999999999999999999999999999887554 678899999999 477
Q ss_pred cccchhccCC----CC-CCC----HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCC
Q 037346 1021 EGTTRSNLDP----LE-EHA----DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVD 1083 (1156)
Q Consensus 1021 ~gTIr~Nl~~----~~-~~~----deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD 1083 (1156)
..||.+||.. .. ..+ ++.+.++++.+++. +.....|..|..+ ||||+.+|++||+||||++||
T Consensus 114 ~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD 193 (331)
T PRK15079 114 RMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALD 193 (331)
T ss_pred CCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 4799999852 11 123 34567889999995 4566677766654 899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHHH
Q 037346 1084 TATDNQIQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFAQ 1146 (1156)
Q Consensus 1084 ~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~ 1146 (1156)
..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.|+++++++++...|.+
T Consensus 194 ~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 194 VSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999988753 7899999999999975 9999999999999999999999876666655
No 421
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=2.5e-32 Score=298.59 Aligned_cols=192 Identities=27% Similarity=0.392 Sum_probs=169.6
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChH---HHhhcCeeecccccccc-cc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLH---DLRTRLSIIPQDPTMFE-GT 1023 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~LR~~i~~VpQdp~LF~-gT 1023 (1156)
..++|++|+.++++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+.. .+|+.++++||++.+|. .|
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRT 98 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCc
Confidence 579999999999999999999999999999999999999999999999999887654 35789999999999997 59
Q ss_pred chhccCCC---CCC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHH
Q 037346 1024 TRSNLDPL---EEH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQ 1089 (1156)
Q Consensus 1024 Ir~Nl~~~---~~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~ 1089 (1156)
+++|+.+. ... .++++.++++..++.+.....+..|..+ ||||+++|++|||||||++||+.+...
T Consensus 99 ~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~ 178 (233)
T cd03258 99 VFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQS 178 (233)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHH
Confidence 99998642 111 2456889999999988887777777655 899999999999999999999999999
Q ss_pred HHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcC
Q 037346 1090 IQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1090 I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+.+.|+++.+ ++|||+|||+++.+.. ||+|++|++|++++.|++++++++
T Consensus 179 l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (233)
T cd03258 179 ILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFAN 231 (233)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999998753 7899999999999865 999999999999999999998753
No 422
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=3e-32 Score=306.09 Aligned_cols=192 Identities=26% Similarity=0.422 Sum_probs=168.0
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCC--hHHHhhcCeeecccc--ccccc
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIG--LHDLRTRLSIIPQDP--TMFEG 1022 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--~~~LR~~i~~VpQdp--~LF~g 1022 (1156)
...++||+|...+|+.++|.|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+|++++||||+| .+|+.
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 99 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEE 99 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHhhceEEEecCchhccccc
Confidence 35799999999999999999999999999999999999999999999999998754 457889999999998 57899
Q ss_pred cchhccCCCC---CCC----HHHHHHHHHHcCCC--hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHH
Q 037346 1023 TTRSNLDPLE---EHA----DEQIWEALDKCQLG--DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTAT 1086 (1156)
Q Consensus 1023 TIr~Nl~~~~---~~~----deei~~al~~~~l~--~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~t 1086 (1156)
|+++|+.+.. ..+ .+.+.++++.+++. ++....|..|..+ ||||+.+|+||||||||++||+.+
T Consensus 100 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~ 179 (287)
T PRK13637 100 TIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKG 179 (287)
T ss_pred cHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHH
Confidence 9999997532 122 24578999999997 5555556666544 899999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhc
Q 037346 1087 DNQIQQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLE 1138 (1156)
Q Consensus 1087 e~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~ 1138 (1156)
...+.+.|+++.+ +.|||+|||+++.+. .||||++|++|++++.|+++++++
T Consensus 180 ~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 180 RDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999998753 789999999999875 599999999999999999999875
No 423
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=99.98 E-value=4.3e-32 Score=311.34 Aligned_cols=195 Identities=21% Similarity=0.349 Sum_probs=171.7
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~ 1026 (1156)
-.++|++|...+++.++|.||||||||||+++|+|+++|++|+|.+||.++...+. .|++++||+|++.+|.. |+++
T Consensus 16 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~~v~Q~~~l~p~~tv~e 93 (353)
T PRK10851 16 QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVGFVFQHYALFRHMTVFD 93 (353)
T ss_pred EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEEEEecCcccCCCCcHHH
Confidence 47899999999999999999999999999999999999999999999999987654 46789999999999975 9999
Q ss_pred ccCCCC-------CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHH
Q 037346 1027 NLDPLE-------EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDN 1088 (1156)
Q Consensus 1027 Nl~~~~-------~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~ 1088 (1156)
|+.+.. ..+ ++++.++++.+++.++....|..|..+ ||||+++|++||||||||+||+.+..
T Consensus 94 ni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~ 173 (353)
T PRK10851 94 NIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRK 173 (353)
T ss_pred HHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHH
Confidence 997531 112 356889999999998888888777655 89999999999999999999999999
Q ss_pred HHHHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1089 QIQQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1089 ~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
.+.+.|+++.+ ++|+|+|||+++.+. -||+|+||++|+|++.|+|++++.++...|
T Consensus 174 ~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~~~~ 232 (353)
T PRK10851 174 ELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPATRF 232 (353)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccchH
Confidence 99999998754 689999999999865 499999999999999999999998765444
No 424
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=99.98 E-value=3.7e-32 Score=311.82 Aligned_cols=195 Identities=24% Similarity=0.392 Sum_probs=172.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccccccc-ccchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFE-GTTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~-gTIr~ 1026 (1156)
-.++||+|...+++.++|.||||||||||+++|+|+.+|++|+|.+||.++.+.+.. ++.++||+|++.+|. .|+++
T Consensus 18 ~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig~v~Q~~~lfp~~tv~e 95 (353)
T TIGR03265 18 TALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYGIVFQSYALFPNLTVAD 95 (353)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEEEEeCCcccCCCCcHHH
Confidence 368899999988888899999999999999999999999999999999999887764 678999999999996 69999
Q ss_pred ccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.+.- ..+ ++++.++++..++.++....|..|..+ ||||+++|++|+||||||+||..+.+.+.+
T Consensus 96 Ni~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~ 175 (353)
T TIGR03265 96 NIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRT 175 (353)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH
Confidence 997531 111 456889999999999988888877755 899999999999999999999999999999
Q ss_pred HHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1093 TLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1093 ~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
.|++..+ +.|+|+|||+++.+. -||+|+||++|+|++.|+|+++++++...|
T Consensus 176 ~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (353)
T TIGR03265 176 EIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPF 230 (353)
T ss_pred HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHH
Confidence 9988654 789999999999865 599999999999999999999998766555
No 425
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=99.98 E-value=1.3e-31 Score=332.84 Aligned_cols=198 Identities=23% Similarity=0.358 Sum_probs=163.6
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcC--eEEEEecCCc-C
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCG--TKAYVAQSPW-I 432 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g--~~~~v~Q~~~-~ 432 (1156)
..++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++. .++|++|++. +
T Consensus 318 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~i~y~~q~~~~l 394 (635)
T PRK11147 318 IVFEMENVNYQID---GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHCGTKLEVAYFDQHRAEL 394 (635)
T ss_pred ceEEEeeeEEEEC---CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCCcEEEEEeCccccc
Confidence 4699999999996 35799999999999999999999999999999999999999999999954 4899999863 4
Q ss_pred C-CccHHHHhhcCCC-C--C--HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeee
Q 037346 433 Q-SGKIEENILFGKE-M--D--RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLL 506 (1156)
Q Consensus 433 ~-~~ti~eni~~~~~-~--~--~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illl 506 (1156)
+ +.||.||+.++.. . + ..+...+++.+++..+. ......+||||||||++||||++.+|++|||
T Consensus 395 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgGekqRl~la~al~~~p~lLlL 464 (635)
T PRK11147 395 DPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKR----------AMTPVKALSGGERNRLLLARLFLKPSNLLIL 464 (635)
T ss_pred CCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHH----------HhChhhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4 4599999987532 1 1 23445566666654221 1234568999999999999999999999999
Q ss_pred eCCCCCcCHHHHHHHHHHHHhcCCCEEEEEccCCCccc-cCCEEEEEe-CCeEE-EccChHHHH
Q 037346 507 DDPFSPVDDHTGAHLFKFCWVSSSKTVIYATHQVEFLP-AADLILVIK-DGKIT-QAGKYSDIL 567 (1156)
Q Consensus 507 Dep~s~lD~~~~~~i~~~~~~~~~~tvi~vtH~~~~~~-~~d~i~~l~-~G~i~-~~g~~~~l~ 567 (1156)
||||++||+.+...+.+.+... +.|+|+||||++++. .||+|++|+ +|++. +.|+|++++
T Consensus 465 DEPt~~LD~~~~~~l~~~l~~~-~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~ 527 (635)
T PRK11147 465 DEPTNDLDVETLELLEELLDSY-QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDAR 527 (635)
T ss_pred cCCCCCCCHHHHHHHHHHHHhC-CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHH
Confidence 9999999999998887655434 459999999999986 599999998 89986 578888874
No 426
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=99.98 E-value=3.6e-32 Score=299.50 Aligned_cols=190 Identities=26% Similarity=0.397 Sum_probs=166.5
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCCh---HHHhhcCeeecccccccc-cc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGL---HDLRTRLSIIPQDPTMFE-GT 1023 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~LR~~i~~VpQdp~LF~-gT 1023 (1156)
..++|++|+.++++.++|.|+||||||||+++|+|+++|++|+|.+||.++..++. ..+|+++++|||++.+|. .|
T Consensus 16 ~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 95 (243)
T TIGR02315 16 QALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLT 95 (243)
T ss_pred ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccccccc
Confidence 47999999999999999999999999999999999999999999999999987764 457889999999999886 59
Q ss_pred chhccCCCC---------------CCCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcC
Q 037346 1024 TRSNLDPLE---------------EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATAS 1081 (1156)
Q Consensus 1024 Ir~Nl~~~~---------------~~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~ 1081 (1156)
+++|+.+.. ...++++.++++.+++.+.....+..|..+ ||||+++|+||||||||++
T Consensus 96 v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 175 (243)
T TIGR02315 96 VLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIARALAQQPDLILADEPIAS 175 (243)
T ss_pred HHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 999996421 011356888999999988777766666654 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHh
Q 037346 1082 VDTATDNQIQQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLL 1137 (1156)
Q Consensus 1082 LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl 1137 (1156)
||+++.+.+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 176 LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 176 LDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 999999999999998743 789999999999985 59999999999999999999874
No 427
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=99.98 E-value=1e-31 Score=333.65 Aligned_cols=199 Identities=27% Similarity=0.394 Sum_probs=168.8
Q ss_pred cEEEeeeEEEeCCC-CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 357 AIEIIDGSFSWDFS-SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~-~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
.++++|+++.|+.. ..+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 58999999999632 1246999999999999999999999999999999999999999999999872
Q ss_pred ----EEEEecCCcCCC-ccHHHHhhcCCC---C----CHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHH
Q 037346 423 ----KAYVAQSPWIQS-GKIEENILFGKE---M----DRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQR 490 (1156)
Q Consensus 423 ----~~~v~Q~~~~~~-~ti~eni~~~~~---~----~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqR 490 (1156)
++|++|++.++. .|+.||+.++.. . .+++..+.++.+++.+.++ ..+.+||||||||
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~lgl~~~~~-----------~~~~~LS~Gq~qr 152 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRVE-----------YQPSQLSGGQQQR 152 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhc-----------CCcccCCHHHHHH
Confidence 589999998886 599999986421 1 1234455666666654433 4456899999999
Q ss_pred HHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccccCCEEEEEeCCeEEEccChHHH
Q 037346 491 IQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLPAADLILVIKDGKITQAGKYSDI 566 (1156)
Q Consensus 491 i~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 566 (1156)
++|||||+++|+++||||||++||+.+++.+.+.+.. .+++|+|++||+++.+..||++++|++|+++++|+.++.
T Consensus 153 v~LAraL~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 230 (648)
T PRK10535 153 VSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEK 230 (648)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCcccc
Confidence 9999999999999999999999999999988876543 358999999999998888999999999999999987654
No 428
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=99.97 E-value=5e-32 Score=329.00 Aligned_cols=193 Identities=23% Similarity=0.366 Sum_probs=158.9
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..++++|+++ .+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 267 ~~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 338 (510)
T PRK15439 267 PVLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLAR 338 (510)
T ss_pred ceEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhC
Confidence 3589999983 2599999999999999999999999999999999999999999999873
Q ss_pred -EEEEecCC---cCC-CccHHHHhhcC----CC--CC----HHHHHHHHHHhCCc-hhhhhCCCCCccccccCCCCCCHH
Q 037346 423 -KAYVAQSP---WIQ-SGKIEENILFG----KE--MD----RERYERVLEACSLK-KDLEVLPFGDQTIIGERGINLSGG 486 (1156)
Q Consensus 423 -~~~v~Q~~---~~~-~~ti~eni~~~----~~--~~----~~~~~~~~~~~~l~-~~~~~~~~g~~t~v~~~g~~LSgG 486 (1156)
++|+||++ .++ ..|+.+|+... .. .. +++.+++++.+++. .. ......+||||
T Consensus 339 ~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~LSgG 407 (510)
T PRK15439 339 GLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNH-----------AEQAARTLSGG 407 (510)
T ss_pred CcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCC-----------ccCccccCCcH
Confidence 79999986 244 45999998532 01 01 12344556666653 22 23455789999
Q ss_pred HHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccCh
Q 037346 487 QKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGKY 563 (1156)
Q Consensus 487 qkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~~ 563 (1156)
||||++||||++.+|++|||||||++||+.+.+.+.+.+.. .+|.|+|++||+++.+. .||++++|++|+++..|+.
T Consensus 408 ~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~ 487 (510)
T PRK15439 408 NQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTG 487 (510)
T ss_pred HHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEcc
Confidence 99999999999999999999999999999999998876643 35899999999999986 5999999999999999988
Q ss_pred HHHH
Q 037346 564 SDIL 567 (1156)
Q Consensus 564 ~~l~ 567 (1156)
+++.
T Consensus 488 ~~~~ 491 (510)
T PRK15439 488 AAIN 491 (510)
T ss_pred ccCC
Confidence 7654
No 429
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=4.4e-32 Score=292.03 Aligned_cols=182 Identities=27% Similarity=0.406 Sum_probs=161.8
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~ 1026 (1156)
..++|++|+..++ .++|.|+||||||||+++|.|+++|++|+|.++|.++.+.+ ..+|++++++||+|.+|.+ |+++
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~~~q~~~~~~~~tv~~ 91 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGYLPQEFGVYPNFTVRE 91 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEEecCCCcccccCCHHH
Confidence 5789999999988 88999999999999999999999999999999999998877 7789999999999999986 9999
Q ss_pred ccCCC---CCC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPL---EEH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~---~~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.+. ... .++++.++++.+++.+.....+..|..+ ||||+++|++|||||||++||+.+.+.+.+
T Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~ 171 (211)
T cd03264 92 FLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRN 171 (211)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH
Confidence 98642 111 1356889999999988777766666654 899999999999999999999999999999
Q ss_pred HHHHhcCCceEEEeecCccccc-ccCEEEEEeCcEEeeec
Q 037346 1093 TLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYD 1131 (1156)
Q Consensus 1093 ~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G 1131 (1156)
.|++..+++|+|+|||+++.+. -||+|++|++|+|++.|
T Consensus 172 ~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 172 LLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9998877799999999999986 49999999999999875
No 430
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=99.97 E-value=2.5e-32 Score=269.02 Aligned_cols=188 Identities=24% Similarity=0.344 Sum_probs=165.0
Q ss_pred CeEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCCh---HHHhhcCeeecccccccc-
Q 037346 946 GEVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGL---HDLRTRLSIIPQDPTMFE- 1021 (1156)
Q Consensus 946 g~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~LR~~i~~VpQdp~LF~- 1021 (1156)
|...++||||..++++-.-|.|||||||||++++|++...|++|+|.++|.|++.+.- .-||++||+|+||--|..
T Consensus 14 g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~~ 93 (223)
T COG2884 14 GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLPD 93 (223)
T ss_pred CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhheeeeEeeecccccc
Confidence 3557788888888887767889999999999999999999999999999999998874 458999999999998775
Q ss_pred ccchhccCCC-----CC--CCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1022 GTTRSNLDPL-----EE--HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1022 gTIr~Nl~~~-----~~--~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
-|+.||+.+. .+ ...+++.++|+.+||.+-...+|..|..+ |||+..+|++||-||||-|||+++.
T Consensus 94 ~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s 173 (223)
T COG2884 94 RTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLS 173 (223)
T ss_pred chHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHH
Confidence 5999999752 11 12467899999999999999999988765 9999999999999999999999999
Q ss_pred HHHHHHHHHhc-CCceEEEeecCcccccccC-EEEEEeCcEEeeecCh
Q 037346 1088 NQIQQTLRQHF-SDCTVVTIAHRITSVLDSA-MVLLLNHGLIKEYDSP 1133 (1156)
Q Consensus 1088 ~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D-~I~Vl~~G~IvE~G~~ 1133 (1156)
..|++.+.+.- .|.|||+.||+.+.+..+. |++.+++|+++....+
T Consensus 174 ~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 174 WEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999998764 4889999999999999877 9999999999987654
No 431
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=6.2e-32 Score=297.08 Aligned_cols=194 Identities=25% Similarity=0.392 Sum_probs=169.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccccccc-ccchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFE-GTTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~-gTIr~ 1026 (1156)
-.++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++|+||+|.+|. .|+++
T Consensus 15 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e 94 (242)
T cd03295 15 KAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEE 94 (242)
T ss_pred eEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHH
Confidence 37899999999999999999999999999999999999999999999999998888888999999999999996 69999
Q ss_pred ccCCCC---CCC----HHHHHHHHHHcCCCh--HHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHH
Q 037346 1027 NLDPLE---EHA----DEQIWEALDKCQLGD--EVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQI 1090 (1156)
Q Consensus 1027 Nl~~~~---~~~----deei~~al~~~~l~~--~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I 1090 (1156)
|+.+.. ... ++++.++++..++.+ .....+..|..+ |||++++|++|||||||++||+.+...+
T Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l 174 (242)
T cd03295 95 NIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQL 174 (242)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHH
Confidence 996431 111 356889999999985 666655555544 8999999999999999999999999999
Q ss_pred HHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCC
Q 037346 1091 QQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKS 1141 (1156)
Q Consensus 1091 ~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~ 1141 (1156)
.+.|++..+ ++|+|++||+++.+. -||+|++|++|++++.|+++++.+...
T Consensus 175 ~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 228 (242)
T cd03295 175 QEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPA 228 (242)
T ss_pred HHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCC
Confidence 999998753 789999999999765 599999999999999999999986543
No 432
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=99.97 E-value=7.4e-32 Score=292.83 Aligned_cols=191 Identities=21% Similarity=0.361 Sum_probs=163.5
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHH-hhcCeeeccccccccc-cch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDL-RTRLSIIPQDPTMFEG-TTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~L-R~~i~~VpQdp~LF~g-TIr 1025 (1156)
..++|++|...+++.++|.|+||||||||+++|.|+++|++|+|.+||.++...+...+ |++++|+||++.+|.+ |++
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 93 (222)
T cd03224 14 QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVE 93 (222)
T ss_pred eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHH
Confidence 47999999999999999999999999999999999999999999999999988877654 6779999999999987 999
Q ss_pred hccCCCCC-C----CHHHHHHHHHHc-CCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1026 SNLDPLEE-H----ADEQIWEALDKC-QLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1026 ~Nl~~~~~-~----~deei~~al~~~-~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
+|+.+... . ..+++.++++.. ++.+.....+..|..+ ||||+++|++|||||||++||+++...+.+
T Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~ 173 (222)
T cd03224 94 ENLLLGAYARRRAKRKARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFE 173 (222)
T ss_pred HHHHHHhhhcCchhHHHHHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHH
Confidence 99965321 1 133456677776 4655555555555544 899999999999999999999999999999
Q ss_pred HHHHhc-CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhc
Q 037346 1093 TLRQHF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLE 1138 (1156)
Q Consensus 1093 ~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~ 1138 (1156)
.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 174 ~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 174 AIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 998875 47899999999998755 99999999999999999988764
No 433
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=99.97 E-value=8.6e-32 Score=310.14 Aligned_cols=194 Identities=25% Similarity=0.375 Sum_probs=169.4
Q ss_pred EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchhc
Q 037346 949 NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRSN 1027 (1156)
Q Consensus 949 ~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~N 1027 (1156)
.++|++|...+++-++|.|+||||||||+++|+|+++|++|+|.+||.++.+++.+ ++++++|+|++.||.. |+++|
T Consensus 29 ~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig~vfQ~~~lfp~ltv~eN 106 (375)
T PRK09452 29 VISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHVNTVFQSYALFPHMTVFEN 106 (375)
T ss_pred EEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCEEEEecCcccCCCCCHHHH
Confidence 46667777777777788899999999999999999999999999999999887764 5789999999999965 99999
Q ss_pred cCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHH
Q 037346 1028 LDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQT 1093 (1156)
Q Consensus 1028 l~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~ 1093 (1156)
|.++- ..+ ++++.++++.+++.++....|..|..+ ||||+++|++||||||||+||..+...+.+.
T Consensus 107 i~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~ 186 (375)
T PRK09452 107 VAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNE 186 (375)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH
Confidence 97532 122 346788999999999999988888765 8999999999999999999999999999999
Q ss_pred HHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1094 LRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1094 l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
|++..+ +.|+|+|||+++.+. -||+|+||++|+|++.|+|++++.++...|
T Consensus 187 L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~~~ 240 (375)
T PRK09452 187 LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLF 240 (375)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 988754 789999999998765 599999999999999999999998765444
No 434
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8.6e-32 Score=298.16 Aligned_cols=197 Identities=23% Similarity=0.366 Sum_probs=165.2
Q ss_pred EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccC-----CCceEEEcCeeCCC--CChHHHhhcCeeecccccccc
Q 037346 949 NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVES-----TAGHILIDGKDISL--IGLHDLRTRLSIIPQDPTMFE 1021 (1156)
Q Consensus 949 ~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~~~LR~~i~~VpQdp~LF~ 1021 (1156)
.++||+|+..+++.++|.|+||||||||+++|+|+++| ++|+|.+||.++.. .+...+|++++||||++.+|.
T Consensus 22 il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 101 (254)
T PRK14273 22 ALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPFL 101 (254)
T ss_pred eecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccccc
Confidence 57788888888888889999999999999999999997 48999999999864 345678899999999999999
Q ss_pred ccchhccCCCCC----C----CHHHHHHHHHHcCCChH----HHhhcCCcccc-------ccccccCCCEEEEecCCcCC
Q 037346 1022 GTTRSNLDPLEE----H----ADEQIWEALDKCQLGDE----VRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASV 1082 (1156)
Q Consensus 1022 gTIr~Nl~~~~~----~----~deei~~al~~~~l~~~----i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~L 1082 (1156)
.|+++|+.+... . .++.+.++++.+++.+. ....+..|..+ ||||+++|++|||||||++|
T Consensus 102 ~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~L 181 (254)
T PRK14273 102 MSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSAL 181 (254)
T ss_pred CcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccc
Confidence 999999975311 1 13567888999988543 33334444433 89999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHH
Q 037346 1083 DTATDNQIQQTLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFA 1145 (1156)
Q Consensus 1083 D~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~ 1145 (1156)
|+.+...+.+.|+++.+++|+|+|||+++.+.. ||||++|++|+|++.|+++++.+++.-.|.
T Consensus 182 D~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 245 (254)
T PRK14273 182 DPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFFNPKNTKT 245 (254)
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCChHH
Confidence 999999999999998778899999999998754 999999999999999999999876554443
No 435
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=6.5e-32 Score=298.59 Aligned_cols=198 Identities=22% Similarity=0.354 Sum_probs=168.9
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhccc-----CCCceEEEcCeeCCCCC--hHHHhhcCeeecccccc
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVE-----STAGHILIDGKDISLIG--LHDLRTRLSIIPQDPTM 1019 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i~--~~~LR~~i~~VpQdp~L 1019 (1156)
...++|++|+..+++.++|.|+||||||||+++|+|++. |++|+|.++|.++.+.+ ...+|++++||||++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 357999999999999999999999999999999999986 47999999999987654 34678899999999999
Q ss_pred ccccchhccCCC---CC------CCHHHHHHHHHHcCCChH----HHhhcCCcccc-------ccccccCCCEEEEecCC
Q 037346 1020 FEGTTRSNLDPL---EE------HADEQIWEALDKCQLGDE----VRKKKGKLDSQ-------GRVLLKKSKVLVLDEAT 1079 (1156)
Q Consensus 1020 F~gTIr~Nl~~~---~~------~~deei~~al~~~~l~~~----i~~lp~gl~s~-------ARALLr~~~ILiLDEaT 1079 (1156)
|.+|+++|+.+. .. ..++++.++++.+++.+. +...+..|..+ ||||+++|+||||||||
T Consensus 98 ~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt 177 (251)
T PRK14244 98 FPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPC 177 (251)
T ss_pred ccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 999999999642 11 123567889999999763 33344445443 89999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1080 ASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1080 S~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++++.+...|
T Consensus 178 ~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 243 (251)
T PRK14244 178 SALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIFKNPQSSK 243 (251)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHhcCCCChH
Confidence 999999999999999988778999999999999864 99999999999999999999997665544
No 436
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=99.97 E-value=9e-32 Score=311.45 Aligned_cols=200 Identities=22% Similarity=0.345 Sum_probs=174.9
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccccc-ccccch
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTM-FEGTTR 1025 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~L-F~gTIr 1025 (1156)
...++|++|..++++.++|.||||||||||+++|.|+++|++|+|.++|.++.+++...+|++|++|||++.+ |+.|++
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~tv~ 95 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFDVR 95 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCCHH
Confidence 4578999999999998899999999999999999999999999999999999999999999999999999987 678999
Q ss_pred hccCCCC-----------CCCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1026 SNLDPLE-----------EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1026 ~Nl~~~~-----------~~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
+|+.++. ...++.+.++++.+++.++....+..|..+ ||||+++|+||||||||++||+.+.
T Consensus 96 e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~ 175 (402)
T PRK09536 96 QVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQ 175 (402)
T ss_pred HHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHH
Confidence 9996532 112356899999999998877766666544 8999999999999999999999999
Q ss_pred HHHHHHHHHhc-CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChHHHHH
Q 037346 1088 NQIQQTLRQHF-SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLV 1148 (1156)
Q Consensus 1088 ~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~ 1148 (1156)
..+.+.|+++. +++|||+++|+++.+. .||||++|++|++++.|+|++++.. ..+.+++
T Consensus 176 ~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~--~~l~~~~ 236 (402)
T PRK09536 176 VRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA--DTLRAAF 236 (402)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc--HHHHHHh
Confidence 99999999875 4789999999999994 6999999999999999999999853 3344444
No 437
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=7.8e-32 Score=301.57 Aligned_cols=192 Identities=20% Similarity=0.329 Sum_probs=171.7
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccc--ccccccch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDP--TMFEGTTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp--~LF~gTIr 1025 (1156)
..++||+|...+|+.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.++||||+| .++..|+.
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~ 100 (277)
T PRK13642 21 NQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGATVE 100 (277)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccCCHH
Confidence 4789999999999989999999999999999999999999999999999999888888999999999998 47788999
Q ss_pred hccCCCC---CCCH----HHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHH
Q 037346 1026 SNLDPLE---EHAD----EQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1026 ~Nl~~~~---~~~d----eei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
+||.+.. ...+ +++.++++.+++.++....|..|..+ ||||+++|+||||||||++||+.+.+.+.
T Consensus 101 eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~ 180 (277)
T PRK13642 101 DDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIM 180 (277)
T ss_pred HHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 9997431 1232 34678999999998888777777655 89999999999999999999999999999
Q ss_pred HHHHHhcC--CceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1092 QTLRQHFS--DCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1092 ~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|++++++..
T Consensus 181 ~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 181 RVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99988754 7899999999999988999999999999999999998864
No 438
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=1e-31 Score=295.54 Aligned_cols=192 Identities=24% Similarity=0.368 Sum_probs=169.4
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHH-hhcCeeeccccccccc-cc
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDL-RTRLSIIPQDPTMFEG-TT 1024 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~L-R~~i~~VpQdp~LF~g-TI 1024 (1156)
...++|++|+..+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+.... |+.++++||++.+|.+ |+
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 94 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTV 94 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCCH
Confidence 357999999999999999999999999999999999999999999999999988876654 4579999999999987 99
Q ss_pred hhccCCCCC------------C---CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCC
Q 037346 1025 RSNLDPLEE------------H---ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASV 1082 (1156)
Q Consensus 1025 r~Nl~~~~~------------~---~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~L 1082 (1156)
++|+.+... . .++++.++++..++.+.....+..|..+ |||++++|++|||||||++|
T Consensus 95 ~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~L 174 (242)
T TIGR03411 95 FENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGM 174 (242)
T ss_pred HHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCC
Confidence 999965311 1 2346889999999987776666556544 89999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhc
Q 037346 1083 DTATDNQIQQTLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLE 1138 (1156)
Q Consensus 1083 D~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~ 1138 (1156)
|+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 175 D~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 175 TDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999988778899999999999875 99999999999999999999874
No 439
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=99.97 E-value=1.2e-31 Score=293.69 Aligned_cols=191 Identities=24% Similarity=0.354 Sum_probs=167.3
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccccc-ccccchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTM-FEGTTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~L-F~gTIr~ 1026 (1156)
..++||+|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+... +++++|+||++.+ +..|+++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~~~q~~~~~~~~t~~~ 93 (236)
T TIGR03864 15 RALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGVVFQQPTLDLDLSVRQ 93 (236)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEEeCCCCCCcccCcHHH
Confidence 4799999999999999999999999999999999999999999999999998876544 4689999999987 5679999
Q ss_pred ccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.+.. ... ++++.++++..++.+.....+..|..+ ||||+++|+||||||||++||+.+.+.+.+
T Consensus 94 ~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~ 173 (236)
T TIGR03864 94 NLRYHAALHGLSRAEARERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVA 173 (236)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHH
Confidence 996431 111 345788899999987766666666544 899999999999999999999999999999
Q ss_pred HHHHhc--CCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1093 TLRQHF--SDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1093 ~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 174 ~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 174 HVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred HHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999875 37899999999999988999999999999999999999864
No 440
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.97 E-value=7.1e-32 Score=278.19 Aligned_cols=149 Identities=22% Similarity=0.240 Sum_probs=130.2
Q ss_pred eeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-EEEEecCCcCCCccHHH
Q 037346 361 IDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT-KAYVAQSPWIQSGKIEE 439 (1156)
Q Consensus 361 ~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~-~~~v~Q~~~~~~~ti~e 439 (1156)
.|+++.|+ +.+++++ +|++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|++|++.
T Consensus 4 ~~l~~~~~---~~~~l~~-~~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~q~~~-------- 71 (177)
T cd03222 4 PDCVKRYG---VFFLLVE-LGVVKEGEVIGIVGPNGTGKTTAVKILAGQLIPNGDNDEWDGITPVYKPQYID-------- 71 (177)
T ss_pred CCeEEEEC---CEEEEcc-CcEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCcEEEECCEEEEEEcccCC--------
Confidence 57888995 3568888 4999999999999999999999999999999999999999984 799988652
Q ss_pred HhhcCCCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHH
Q 037346 440 NILFGKEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGA 519 (1156)
Q Consensus 440 ni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~ 519 (1156)
||||||||++||||++.+|+++||||||++||+.+++
T Consensus 72 -------------------------------------------LSgGq~qrv~laral~~~p~lllLDEPts~LD~~~~~ 108 (177)
T cd03222 72 -------------------------------------------LSGGELQRVAIAAALLRNATFYLFDEPSAYLDIEQRL 108 (177)
T ss_pred -------------------------------------------CCHHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHH
Confidence 9999999999999999999999999999999999999
Q ss_pred HHHHHHHh--cC-CCEEEEEccCCCccc-cCCEEEEEeCCeEEEc--cChH
Q 037346 520 HLFKFCWV--SS-SKTVIYATHQVEFLP-AADLILVIKDGKITQA--GKYS 564 (1156)
Q Consensus 520 ~i~~~~~~--~~-~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~--g~~~ 564 (1156)
.+.+.+.. .+ ++|+|++||+++.+. .||++++|+++-.+.+ |.+.
T Consensus 109 ~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~~~~~~~~~~~~~ 159 (177)
T cd03222 109 NAARAIRRLSEEGKKTALVVEHDLAVLDYLSDRIHVFEGEPGVYGIASQPK 159 (177)
T ss_pred HHHHHHHHHHHcCCCEEEEEECCHHHHHHhCCEEEEEcCCCccceeccCCc
Confidence 88776643 34 489999999999987 5999999998765533 4444
No 441
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=8.7e-32 Score=300.41 Aligned_cols=192 Identities=22% Similarity=0.369 Sum_probs=169.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccc--ccccccch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDP--TMFEGTTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp--~LF~gTIr 1025 (1156)
..|+|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++|+||+| .++..|++
T Consensus 23 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~ 102 (271)
T PRK13632 23 NALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGATVE 102 (271)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcccHH
Confidence 4688999998888888999999999999999999999999999999999998888888999999999998 45577999
Q ss_pred hccCCCC---CCCH----HHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHH
Q 037346 1026 SNLDPLE---EHAD----EQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1026 ~Nl~~~~---~~~d----eei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
+|+.+.. ..+. +.+.++++.+++.++....+..|..+ ||||+++|++|||||||++||+.+.+.+.
T Consensus 103 enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~ 182 (271)
T PRK13632 103 DDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIK 182 (271)
T ss_pred HHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 9997531 1222 34678899999998888888777655 89999999999999999999999999999
Q ss_pred HHHHHhcC--CceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1092 QTLRQHFS--DCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1092 ~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 183 ~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 183 KIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99998753 4899999999998889999999999999999999998764
No 442
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=8.2e-32 Score=302.16 Aligned_cols=192 Identities=26% Similarity=0.372 Sum_probs=168.2
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCC--CCChHHHhhcCeeecccc--cccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDIS--LIGLHDLRTRLSIIPQDP--TMFEGT 1023 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~~~~LR~~i~~VpQdp--~LF~gT 1023 (1156)
-.++||+|...+|+.++|.|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|++++|+||+| .+|+.|
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~t 99 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLFSAS 99 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhcccc
Confidence 4788888888888888999999999999999999999999999999999984 345677899999999998 578999
Q ss_pred chhccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHH
Q 037346 1024 TRSNLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQ 1089 (1156)
Q Consensus 1024 Ir~Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~ 1089 (1156)
+++|+.+.. ..+ ++.+.++++.+++.++....+..|..+ ||||+.+|+||||||||++||+++...
T Consensus 100 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~ 179 (283)
T PRK13636 100 VYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSE 179 (283)
T ss_pred HHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 999997521 122 245788899999998877777666655 899999999999999999999999999
Q ss_pred HHHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1090 IQQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1090 I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+.+.|+++.+ ++|||++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 180 l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 180 IMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999988754 789999999999987 6999999999999999999998863
No 443
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=99.97 E-value=8.8e-32 Score=311.34 Aligned_cols=195 Identities=18% Similarity=0.316 Sum_probs=170.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~ 1026 (1156)
..++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+.. +++++||||++.+|.. |+++
T Consensus 17 ~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~~v~Q~~~l~~~~tv~e 94 (369)
T PRK11000 17 VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVGMVFQSYALYPHLSVAE 94 (369)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEEEEeCCcccCCCCCHHH
Confidence 478999999999988899999999999999999999999999999999999877653 5689999999999965 9999
Q ss_pred ccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.+.. ..+ ++++.++++.+++.++....|..|..+ ||||+++|+|||||||||+||+.+.+.+.+
T Consensus 95 ni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~ 174 (369)
T PRK11000 95 NMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRI 174 (369)
T ss_pred HHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH
Confidence 997531 112 356889999999998888888777755 899999999999999999999999999999
Q ss_pred HHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1093 TLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1093 ~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
.|++..+ +.|+|+|||+++.+. -||+|++|++|+|++.|+|+++..++...|
T Consensus 175 ~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~~~ 229 (369)
T PRK11000 175 EISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPANRF 229 (369)
T ss_pred HHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 9988643 789999999998775 599999999999999999999987665443
No 444
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=99.97 E-value=8.4e-32 Score=304.97 Aligned_cols=191 Identities=24% Similarity=0.365 Sum_probs=168.6
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~ 1026 (1156)
..++||||..++++.++|.||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++++||++.+|.. |+++
T Consensus 7 ~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~e 85 (302)
T TIGR01188 7 KAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGRE 85 (302)
T ss_pred eEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHHH
Confidence 47999999999999999999999999999999999999999999999999976 345778999999999999976 9999
Q ss_pred ccCCCC---CC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLE---EH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~---~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.+.. .. .++++.++++.+++.+.....+..|..+ ||||+++|++|||||||++||+++.+.+.+
T Consensus 86 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~ 165 (302)
T TIGR01188 86 NLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWD 165 (302)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHH
Confidence 996421 11 1346889999999987776666666544 899999999999999999999999999999
Q ss_pred HHHHhc-CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcC
Q 037346 1093 TLRQHF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1093 ~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
.|++.. +++|||++||+++.+.. ||+|++|++|+|++.|+++++.++
T Consensus 166 ~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 166 YIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 998874 47899999999999875 999999999999999999998754
No 445
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.97 E-value=8.5e-32 Score=288.34 Aligned_cols=178 Identities=24% Similarity=0.352 Sum_probs=158.7
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccc--ccccccch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDP--TMFEGTTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp--~LF~gTIr 1025 (1156)
-.++|++|+..+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.. ...|++++|+||+| .+|..|++
T Consensus 14 ~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 14 EILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred ceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEEecChhhhhhhccHH
Confidence 47999999999999999999999999999999999999999999999999864 45678899999998 46789999
Q ss_pred hccCCCCC---CCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHH
Q 037346 1026 SNLDPLEE---HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLR 1095 (1156)
Q Consensus 1026 ~Nl~~~~~---~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~ 1095 (1156)
||+.+... ..++++.++++.+++.++....|..|..+ ||||+++|++|||||||++||+++.+.+.+.|+
T Consensus 91 e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~ 170 (205)
T cd03226 91 EELLLGLKELDAGNEQAETVLKDLDLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIR 170 (205)
T ss_pred HHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHH
Confidence 99975321 22457899999999999888888877765 899999999999999999999999999999998
Q ss_pred Hh-cCCceEEEeecCcccccc-cCEEEEEeCcEEe
Q 037346 1096 QH-FSDCTVVTIAHRITSVLD-SAMVLLLNHGLIK 1128 (1156)
Q Consensus 1096 ~~-~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~Iv 1128 (1156)
+. .+++|+|++||+++.+.. ||+|++|++|++|
T Consensus 171 ~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 171 ELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 87 357899999999999875 9999999999985
No 446
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=9.8e-32 Score=300.77 Aligned_cols=192 Identities=22% Similarity=0.333 Sum_probs=171.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccc--ccccccch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDP--TMFEGTTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp--~LF~gTIr 1025 (1156)
..++||+|...+|+.++|.|+||||||||+++|+|+++|++|+|.+||.++...+...+++++++|||+| .+|+.|++
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~ 97 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVE 97 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEEEecCcccccccccHH
Confidence 3789999999999999999999999999999999999999999999999998888888999999999998 47888999
Q ss_pred hccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHH
Q 037346 1026 SNLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1026 ~Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
+|+.+.. ..+ ++.+.++++.+++.+.....|..|..+ ||||+.+|++|||||||++||+.+.+.+.
T Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~ 177 (277)
T PRK13652 98 QDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELI 177 (277)
T ss_pred HHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 9996421 122 345789999999998888888777765 89999999999999999999999999999
Q ss_pred HHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1092 QTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1092 ~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+.|++..+ ++|||++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 178 ~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 178 DFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99988753 789999999999984 6999999999999999999999864
No 447
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=9.7e-32 Score=299.89 Aligned_cols=192 Identities=20% Similarity=0.371 Sum_probs=169.6
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccc--cccccch
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPT--MFEGTTR 1025 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~--LF~gTIr 1025 (1156)
..++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++++++||+|. ++..|++
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~ 102 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGSIVK 102 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccccHH
Confidence 46888888888888889999999999999999999999999999999999998888889999999999994 4456889
Q ss_pred hccCCCC---CC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHH
Q 037346 1026 SNLDPLE---EH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1026 ~Nl~~~~---~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
+|+.+.. .. .++++.++++.+++.++....+..|..+ |||++++|++|||||||++||+.+.+.+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~ 182 (269)
T PRK13648 103 YDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLL 182 (269)
T ss_pred HHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 9986431 11 1356788999999988888777777655 89999999999999999999999999999
Q ss_pred HHHHHhcC--CceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1092 QTLRQHFS--DCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1092 ~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+.|++..+ ++|+|+|||+++.+..||+|++|++|+|++.|+++++..+
T Consensus 183 ~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 183 DLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99998753 7899999999999888999999999999999999998764
No 448
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.97 E-value=1.3e-31 Score=296.30 Aligned_cols=197 Identities=23% Similarity=0.373 Sum_probs=171.5
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCC-------------hHHHhhcCeeec
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIG-------------LHDLRTRLSIIP 1014 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-------------~~~LR~~i~~Vp 1014 (1156)
-.++||+|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++..++ ...+|+.+++|+
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 93 (252)
T TIGR03005 14 TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGMVF 93 (252)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchhHHHHHhhCeEEEe
Confidence 4789999999999999999999999999999999999999999999999997653 246788999999
Q ss_pred ccccccc-ccchhccCCCC----CC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecC
Q 037346 1015 QDPTMFE-GTTRSNLDPLE----EH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEA 1078 (1156)
Q Consensus 1015 Qdp~LF~-gTIr~Nl~~~~----~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEa 1078 (1156)
|++.+|. .|+++|+.... .. .++++.++++.+++.+.....|..+..+ ||||+++|++||||||
T Consensus 94 q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP 173 (252)
T TIGR03005 94 QSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMPAQLSGGQQQRVAIARALAMRPKVMLFDEV 173 (252)
T ss_pred cCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcChhhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999885 79999997421 11 2356889999999988888777777655 8999999999999999
Q ss_pred CcCCCHHHHHHHHHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1079 TASVDTATDNQIQQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1079 TS~LD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
|++||+.+...+.+.|++..+ ++|+|+|||+++.+. -||+|++|++|++++.|+++++.+.....+
T Consensus 174 ~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 242 (252)
T TIGR03005 174 TSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDEIFRQPKEER 242 (252)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCCCcHH
Confidence 999999999999999998753 789999999999985 599999999999999999999986544333
No 449
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=99.97 E-value=1.6e-31 Score=289.70 Aligned_cols=185 Identities=31% Similarity=0.473 Sum_probs=166.3
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccccchh
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEGTTRS 1026 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~gTIr~ 1026 (1156)
...|+|++|..++++.++|.|+||||||||+++|+|+.+|++|+|.++|.++...+...+|+.++++||++.+|..|+++
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~e 96 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFYGTLRD 96 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCccccchHHH
Confidence 35789999999999989999999999999999999999999999999999998888888899999999999999999999
Q ss_pred ccCCCC-CCCHHHHHHHHHHcCCChHHHhhcCCccc-----------c-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1027 NLDPLE-EHADEQIWEALDKCQLGDEVRKKKGKLDS-----------Q-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1027 Nl~~~~-~~~deei~~al~~~~l~~~i~~lp~gl~s-----------~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
|+.+.. ....+++.++++..++.+.+...|.++++ + |||++.+|++|||||||++||+++.
T Consensus 97 ~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~ 176 (220)
T cd03245 97 NITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSE 176 (220)
T ss_pred HhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHH
Confidence 997643 23456788899999999888887764442 1 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCceEEEeecCcccccccCEEEEEeCcEEeeec
Q 037346 1088 NQIQQTLRQHFSDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYD 1131 (1156)
Q Consensus 1088 ~~I~~~l~~~~~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G 1131 (1156)
..+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 177 ~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 177 ERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999887668999999999988889999999999998865
No 450
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=7.8e-32 Score=302.80 Aligned_cols=192 Identities=23% Similarity=0.364 Sum_probs=167.7
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCC----ChHHHhhcCeeecccc--cccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLI----GLHDLRTRLSIIPQDP--TMFE 1021 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~~~~LR~~i~~VpQdp--~LF~ 1021 (1156)
..++||+|...+++.++|.|+||||||||+++|+|+++|++|+|.+||+++... +...+|++|+||||+| .+|.
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~ 100 (286)
T PRK13646 21 QAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFE 100 (286)
T ss_pred CceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhheEEEecChHhccch
Confidence 479999999999998999999999999999999999999999999999999764 3467899999999998 5888
Q ss_pred ccchhccCCCC---CCC----HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHH
Q 037346 1022 GTTRSNLDPLE---EHA----DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTAT 1086 (1156)
Q Consensus 1022 gTIr~Nl~~~~---~~~----deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~t 1086 (1156)
.|+++||.+.. ..+ ++.+.++++.+|+. +.....|..|..+ ||||+.+|+||||||||++||+.+
T Consensus 101 ~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~ 180 (286)
T PRK13646 101 DTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQS 180 (286)
T ss_pred hhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHH
Confidence 99999997531 122 34577899999997 5666666666655 899999999999999999999999
Q ss_pred HHHHHHHHHHhc--CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1087 DNQIQQTLRQHF--SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1087 e~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
...+.+.|+++. .++|||+|||+++.+. .||+|++|++|+|++.|++++++++
T Consensus 181 ~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 236 (286)
T PRK13646 181 KRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD 236 (286)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 999999999864 4789999999999875 5899999999999999999998864
No 451
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=6.9e-32 Score=303.29 Aligned_cols=192 Identities=26% Similarity=0.339 Sum_probs=166.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCC----CChHHHhhcCeeecccc--cccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISL----IGLHDLRTRLSIIPQDP--TMFE 1021 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~~~~LR~~i~~VpQdp--~LF~ 1021 (1156)
..++||+|...+++.++|.|+||||||||+++|.|+++|++|+|++||.++.. .+...+|++++||+|+| .+|.
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~ 99 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLFE 99 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHHHHhhEEEEecCcchhccc
Confidence 37899999999999999999999999999999999999999999999999863 34567899999999998 7999
Q ss_pred ccchhccCCCCC---CC----HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHH
Q 037346 1022 GTTRSNLDPLEE---HA----DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTAT 1086 (1156)
Q Consensus 1022 gTIr~Nl~~~~~---~~----deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~t 1086 (1156)
.|+.+|+.++.. .+ ++++.++++.+++. ++....|..|..+ ||||+.+|+||||||||++||+.+
T Consensus 100 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~ 179 (288)
T PRK13643 100 ETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKA 179 (288)
T ss_pred chHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHH
Confidence 999999975321 22 34578889999995 4666666666644 899999999999999999999999
Q ss_pred HHHHHHHHHHhc-CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1087 DNQIQQTLRQHF-SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1087 e~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
...+.+.|+++. +++|||+|||+++.+. .||+|++|++|+|++.|+++++..+
T Consensus 180 ~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 180 RIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999998764 4789999999999875 5999999999999999999998753
No 452
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.4e-31 Score=292.33 Aligned_cols=186 Identities=19% Similarity=0.329 Sum_probs=164.8
Q ss_pred EEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchhccCC
Q 037346 952 HLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRSNLDP 1030 (1156)
Q Consensus 952 ~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~Nl~~ 1030 (1156)
||+|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++|+||++.+|.+ |+++|+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEEEecccccccCCcHHHHHhc
Confidence 7888888888889999999999999999999999999999999999987654 36789999999999986 99999974
Q ss_pred CC-C------CCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHH
Q 037346 1031 LE-E------HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQ 1096 (1156)
Q Consensus 1031 ~~-~------~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~ 1096 (1156)
.. . ..++++.++++.+++.+.+...|..|..+ |||++++|++|||||||++||+++.+.+.+.|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~ 174 (232)
T PRK10771 95 GLNPGLKLNAAQREKLHAIARQMGIEDLLARLPGQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQ 174 (232)
T ss_pred ccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 21 1 12456899999999998888888877765 8999999999999999999999999999999988
Q ss_pred hcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcC
Q 037346 1097 HFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1097 ~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 175 ~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 175 VCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 753 7899999999998765 899999999999999999999864
No 453
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1e-31 Score=298.95 Aligned_cols=192 Identities=22% Similarity=0.316 Sum_probs=169.7
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cch
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTR 1025 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr 1025 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.++++||++.+|.+ |++
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 103 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMTVR 103 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCccHH
Confidence 3568888888888888899999999999999999999999999999999999988888999999999999877665 999
Q ss_pred hccCCCC-----------CCCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1026 SNLDPLE-----------EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1026 ~Nl~~~~-----------~~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
+|+.+.. ...++++.++++.+++.+++...|..|..+ ||||+.+|+||||||||++||+.+.
T Consensus 104 e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~ 183 (265)
T PRK10575 104 ELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQ 183 (265)
T ss_pred HHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHH
Confidence 9996421 012356889999999988887777777655 8999999999999999999999999
Q ss_pred HHHHHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhc
Q 037346 1088 NQIQQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLE 1138 (1156)
Q Consensus 1088 ~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~ 1138 (1156)
+.+.+.|+++.+ ++|+|+|||+++.+. .||+|++|++|+|++.|+++++..
T Consensus 184 ~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 184 VDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 999999988742 789999999999885 599999999999999999999874
No 454
>PRK13409 putative ATPase RIL; Provisional
Probab=99.97 E-value=1.8e-31 Score=325.38 Aligned_cols=191 Identities=21% Similarity=0.279 Sum_probs=162.1
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCeEEEEecCCcC-CC
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGTKAYVAQSPWI-QS 434 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~~~~v~Q~~~~-~~ 434 (1156)
..++++|+++.|+. ..|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++-.++|+||++.+ ++
T Consensus 339 ~~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~~~i~y~~Q~~~~~~~ 414 (590)
T PRK13409 339 TLVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPELKISYKPQYIKPDYD 414 (590)
T ss_pred eEEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEeeeEEEecccccCCCC
Confidence 46999999999952 35999999999999999999999999999999999999999999988789999999865 46
Q ss_pred ccHHHHhhcCCC-CC-HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCC
Q 037346 435 GKIEENILFGKE-MD-RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSP 512 (1156)
Q Consensus 435 ~ti~eni~~~~~-~~-~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~ 512 (1156)
.||+||+.++.. .. ....+++++..++.+..+ ....+|||||||||+|||||+.+|++|||||||++
T Consensus 415 ~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~-----------~~~~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~ 483 (590)
T PRK13409 415 GTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLD-----------KNVKDLSGGELQRVAIAACLSRDADLYLLDEPSAH 483 (590)
T ss_pred CcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHh-----------CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccC
Confidence 799999987532 22 334567778877764333 44578999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHh---cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEccC
Q 037346 513 VDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAGK 562 (1156)
Q Consensus 513 lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g~ 562 (1156)
||+.++..+.+.+.. ..|+|+|+||||++++. .||+|++|++ ++...|+
T Consensus 484 LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 484 LDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 999999988876643 24899999999999886 5999999975 7766665
No 455
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.1e-31 Score=303.22 Aligned_cols=201 Identities=20% Similarity=0.286 Sum_probs=171.5
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChH---HHhhcCeeeccccc--ccc-
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLH---DLRTRLSIIPQDPT--MFE- 1021 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~LR~~i~~VpQdp~--LF~- 1021 (1156)
-.++||+|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.|+.+++.. .+|++|++|||+|. |+.
T Consensus 29 ~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~ 108 (327)
T PRK11308 29 KALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPR 108 (327)
T ss_pred eEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCc
Confidence 479999999999999999999999999999999999999999999999999988754 56789999999994 554
Q ss_pred ccchhccCC----CCCC----CHHHHHHHHHHcCCCh-HHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHH
Q 037346 1022 GTTRSNLDP----LEEH----ADEQIWEALDKCQLGD-EVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTA 1085 (1156)
Q Consensus 1022 gTIr~Nl~~----~~~~----~deei~~al~~~~l~~-~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~ 1085 (1156)
-|+.+|+.. .... ..+++.++++.+++.+ .....|..|..+ ||||+.+|+|||+||||++||..
T Consensus 109 ~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~ 188 (327)
T PRK11308 109 KKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVS 188 (327)
T ss_pred cCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHH
Confidence 388888741 1111 1356889999999974 556667666644 89999999999999999999999
Q ss_pred HHHHHHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHHHHH
Q 037346 1086 TDNQIQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLV 1148 (1156)
Q Consensus 1086 te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~ 1148 (1156)
+.+.|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.|+++++++++...|.+.+
T Consensus 189 ~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~~~~p~hpyt~~l 254 (327)
T PRK11308 189 VQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQIFNNPRHPYTQAL 254 (327)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcCCCCHHHHHH
Confidence 99999999988753 7899999999999975 999999999999999999999987666666543
No 456
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=2.4e-31 Score=275.51 Aligned_cols=185 Identities=21% Similarity=0.303 Sum_probs=160.0
Q ss_pred CCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCeEEEEecCCcC--CCccHHHHhhcC------
Q 037346 373 NPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGTKAYVAQSPWI--QSGKIEENILFG------ 444 (1156)
Q Consensus 373 ~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~~~~v~Q~~~~--~~~ti~eni~~~------ 444 (1156)
..+|+||||++++||.++|+|+||||||||+++|.|.++|++|+|.++|++++.-.-..= ++.|-||||.+-
T Consensus 40 ~~aL~disf~i~~Ge~vGiiG~NGaGKSTLlkliaGi~~Pt~G~v~v~G~v~~li~lg~Gf~pelTGreNi~l~~~~~G~ 119 (249)
T COG1134 40 FWALKDISFEIYKGERVGIIGHNGAGKSTLLKLIAGIYKPTSGKVKVTGKVAPLIELGAGFDPELTGRENIYLRGLILGL 119 (249)
T ss_pred EEEecCceEEEeCCCEEEEECCCCCcHHHHHHHHhCccCCCCceEEEcceEehhhhcccCCCcccchHHHHHHHHHHhCc
Confidence 468999999999999999999999999999999999999999999999999865444332 345999999752
Q ss_pred -CCCCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHH
Q 037346 445 -KEMDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFK 523 (1156)
Q Consensus 445 -~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~ 523 (1156)
+...+++++++++.+.|.++++ ....+.|-|++.|+++|-|...+|||||+||.++..|+.-.++-.+
T Consensus 120 ~~~ei~~~~~eIieFaELG~fi~-----------~PvktYSSGM~aRLaFsia~~~~pdILllDEvlavGD~~F~~K~~~ 188 (249)
T COG1134 120 TRKEIDEKVDEIIEFAELGDFID-----------QPVKTYSSGMYARLAFSVATHVEPDILLLDEVLAVGDAAFQEKCLE 188 (249)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhh-----------CchhhccHHHHHHHHHhhhhhcCCCEEEEehhhhcCCHHHHHHHHH
Confidence 2234678889999999987765 3457899999999999999999999999999999999988776655
Q ss_pred HHHh--cCCCEEEEEccCCCcccc-CCEEEEEeCCeEEEccChHHHHh
Q 037346 524 FCWV--SSSKTVIYATHQVEFLPA-ADLILVIKDGKITQAGKYSDILN 568 (1156)
Q Consensus 524 ~~~~--~~~~tvi~vtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~l~~ 568 (1156)
.+.. .+++|+|+|||+++.++. ||++++|++|++...|++++..+
T Consensus 189 rl~e~~~~~~tiv~VSHd~~~I~~~Cd~~i~l~~G~i~~~G~~~~vi~ 236 (249)
T COG1134 189 RLNELVEKNKTIVLVSHDLGAIKQYCDRAIWLEHGQIRMEGSPEEVIP 236 (249)
T ss_pred HHHHHHHcCCEEEEEECCHHHHHHhcCeeEEEeCCEEEEcCCHHHHHH
Confidence 5433 567999999999999975 99999999999999999998874
No 457
>COG4136 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=1.8e-31 Score=251.53 Aligned_cols=182 Identities=24% Similarity=0.408 Sum_probs=154.1
Q ss_pred cEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCC---CcEEEEcC-----------e
Q 037346 357 AIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKE---SGIIRLCG-----------T 422 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~---~G~i~~~g-----------~ 422 (1156)
.+.++|++..-+ +...|-++|++|.+||++-+.||||||||||+.-+.|.+.+. +|++.+++ +
T Consensus 2 ~l~l~nvsl~l~---g~cLLa~~n~Tia~GeivtlMGPSGcGKSTLls~~~G~La~~F~~~G~~~l~~~~l~~lPa~qRq 78 (213)
T COG4136 2 MLCLKNVSLRLP---GSCLLANVNFTIAKGEIVTLMGPSGCGKSTLLSWMIGALAGQFSCTGELWLNEQRLDMLPAAQRQ 78 (213)
T ss_pred ceeeeeeeecCC---CceEEEeeeEEecCCcEEEEECCCCccHHHHHHHHHhhcccCcceeeEEEECCeeccccchhhhh
Confidence 467889997775 568999999999999999999999999999999999999875 79999998 3
Q ss_pred EEEEecCCcCCCc-cHHHHhhcCCCCC------HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHHHHH
Q 037346 423 KAYVAQSPWIQSG-KIEENILFGKEMD------RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQIAR 495 (1156)
Q Consensus 423 ~~~v~Q~~~~~~~-ti~eni~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~lAr 495 (1156)
+|+.+|++|+|+. +|-+|+.|..+.+ +...+.+++..+|+..+.+.| .+||||||.||+|-|
T Consensus 79 ~GiLFQD~lLFphlsVg~Nl~fAlp~~~KG~aRr~~a~aAL~~~gL~g~f~~dP-----------~tlSGGQrARvaL~R 147 (213)
T COG4136 79 IGILFQDALLFPHLSVGQNLLFALPATLKGNARRNAANAALERSGLDGAFHQDP-----------ATLSGGQRARVALLR 147 (213)
T ss_pred eeeeecccccccccccccceEEecCcccccHHHHhhHHHHHHHhccchhhhcCh-----------hhcCcchHHHHHHHH
Confidence 7999999999976 9999999976532 233456788888888877666 589999999999999
Q ss_pred hhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh---cCCCEEEEEccCCCccccCCEEEEE
Q 037346 496 PLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV---SSSKTVIYATHQVEFLPAADLILVI 552 (1156)
Q Consensus 496 al~~~~~illlDep~s~lD~~~~~~i~~~~~~---~~~~tvi~vtH~~~~~~~~d~i~~l 552 (1156)
+|+..|+.++||||+|.||..-+.+..+..+. ..|-.+|+||||.+.++...+|+.|
T Consensus 148 ~Lla~Pk~lLLDEPFS~LD~ALR~qfR~wVFs~~r~agiPtv~VTHD~~DvpagsrVie~ 207 (213)
T COG4136 148 ALLAQPKALLLDEPFSRLDVALRDQFRQWVFSEVRAAGIPTVQVTHDLQDVPAGSRVIEM 207 (213)
T ss_pred HHHhCcceeeeCCchhHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccccCCCCCeeeee
Confidence 99999999999999999999877665555443 4578899999999988865566554
No 458
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.3e-31 Score=300.25 Aligned_cols=192 Identities=22% Similarity=0.343 Sum_probs=171.4
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCC---ceEEEcCeeCCCCChHHHhhcCeeecccc--ccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTA---GHILIDGKDISLIGLHDLRTRLSIIPQDP--TMFEG 1022 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~---G~I~idG~di~~i~~~~LR~~i~~VpQdp--~LF~g 1022 (1156)
..++||+|..++++.++|.|+||||||||+++|+|+++|++ |+|.+||.++...+...+|++++||||+| .+++.
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 36899999999998889999999999999999999999998 89999999999888888899999999998 46788
Q ss_pred cchhccCCCC---CCCH----HHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHH
Q 037346 1023 TTRSNLDPLE---EHAD----EQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDN 1088 (1156)
Q Consensus 1023 TIr~Nl~~~~---~~~d----eei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~ 1088 (1156)
|+++||.+.. ..+. +++.++++.+++.++....|..|..+ ||||+.+|++|||||||++||+.+..
T Consensus 101 tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~ 180 (282)
T PRK13640 101 TVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKE 180 (282)
T ss_pred CHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHH
Confidence 9999997531 1222 45788999999999888888777755 89999999999999999999999999
Q ss_pred HHHHHHHHhcC--CceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1089 QIQQTLRQHFS--DCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1089 ~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
.+.+.|+++.+ ++|||++||+++.+..||+|++|++|++++.|++++++..
T Consensus 181 ~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 181 QILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999988753 7899999999999989999999999999999999998753
No 459
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.1e-31 Score=295.76 Aligned_cols=194 Identities=25% Similarity=0.385 Sum_probs=164.5
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhccc-----CCCceEEEcCeeCCC--CChHHHhhcCeeeccccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVE-----STAGHILIDGKDISL--IGLHDLRTRLSIIPQDPTMF 1020 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~~~LR~~i~~VpQdp~LF 1020 (1156)
..++|++|...+++.++|.|+||||||||+++|+|+++ |++|+|.+||.++.. .+...+|++++|+||++.+|
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 35777777777888888999999999999999999986 589999999999863 45678899999999999999
Q ss_pred cccchhccCCCC----CCC----HHHHHHHHHHcCCChH----HHhhcCCcccc-------ccccccCCCEEEEecCCcC
Q 037346 1021 EGTTRSNLDPLE----EHA----DEQIWEALDKCQLGDE----VRKKKGKLDSQ-------GRVLLKKSKVLVLDEATAS 1081 (1156)
Q Consensus 1021 ~gTIr~Nl~~~~----~~~----deei~~al~~~~l~~~----i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~ 1081 (1156)
..|+++|+.+.. ..+ +++++++++.+++.+. ....+..|..+ ||||+++|+||||||||++
T Consensus 107 ~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~ 186 (260)
T PRK10744 107 PMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSA 186 (260)
T ss_pred cCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCcc
Confidence 999999997531 122 3568899999998543 33444445444 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCC
Q 037346 1082 VDTATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKS 1141 (1156)
Q Consensus 1082 LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~ 1141 (1156)
||+++.+.+.+.|++..++.|+|+|||+++.+. -||+|++|++|++++.|+++++...+.
T Consensus 187 LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 247 (260)
T PRK10744 187 LDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIFTKPA 247 (260)
T ss_pred CCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCCC
Confidence 999999999999998877789999999999885 599999999999999999999986543
No 460
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=99.97 E-value=1.4e-31 Score=324.68 Aligned_cols=191 Identities=27% Similarity=0.400 Sum_probs=156.3
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCC-CCcEEEEcCe------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPK-ESGIIRLCGT------------ 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~-~~G~i~~~g~------------ 422 (1156)
..++++|+++.|+ ++.+|+|+||++++||+++|+||||||||||+++|+|+.++ ++|+|.++|+
T Consensus 259 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~ 335 (490)
T PRK10938 259 PRIVLNNGVVSYN---DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIK 335 (490)
T ss_pred ceEEEeceEEEEC---CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHH
Confidence 4699999999996 34699999999999999999999999999999999998876 6999999762
Q ss_pred --EEEEecCCcCC---CccHHHHhhcCC--------CCC---HHHHHHHHHHhCCch-hhhhCCCCCccccccCCCCCCH
Q 037346 423 --KAYVAQSPWIQ---SGKIEENILFGK--------EMD---RERYERVLEACSLKK-DLEVLPFGDQTIIGERGINLSG 485 (1156)
Q Consensus 423 --~~~v~Q~~~~~---~~ti~eni~~~~--------~~~---~~~~~~~~~~~~l~~-~~~~~~~g~~t~v~~~g~~LSg 485 (1156)
++|++|++.++ ..++++++.++. ... +++.+++++.+++.+ .. .....+|||
T Consensus 336 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LSg 404 (490)
T PRK10938 336 KHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTA-----------DAPFHSLSW 404 (490)
T ss_pred hhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhc-----------cCchhhCCH
Confidence 68999998653 246777765431 011 234566777777754 22 234568999
Q ss_pred HHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCC-CEEEEEccCCCcccc--CCEEEEEeCCeEEEc
Q 037346 486 GQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSS-KTVIYATHQVEFLPA--ADLILVIKDGKITQA 560 (1156)
Q Consensus 486 GqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~-~tvi~vtH~~~~~~~--~d~i~~l~~G~i~~~ 560 (1156)
|||||++||||++.+|++|||||||++||+.+.+.+.+.+.. .++ .|+|++||+++.+.. ||++++|++|++++.
T Consensus 405 Gq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~ 484 (490)
T PRK10938 405 GQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRY 484 (490)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEe
Confidence 999999999999999999999999999999999999876644 344 479999999999863 899999999998754
No 461
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=99.97 E-value=5.6e-32 Score=292.34 Aligned_cols=180 Identities=24% Similarity=0.354 Sum_probs=158.8
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChH---HHhhcCeeecccccccc-cc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLH---DLRTRLSIIPQDPTMFE-GT 1023 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~LR~~i~~VpQdp~LF~-gT 1023 (1156)
..++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+.. .+|++++|+||+|.+|. .|
T Consensus 17 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 96 (216)
T TIGR00960 17 PALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRT 96 (216)
T ss_pred eEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHhceEEecCcccccccc
Confidence 478999999999999999999999999999999999999999999999999876643 47889999999999886 59
Q ss_pred chhccCCC----CC---CCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHH
Q 037346 1024 TRSNLDPL----EE---HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQ 1089 (1156)
Q Consensus 1024 Ir~Nl~~~----~~---~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~ 1089 (1156)
+++|+.+. .. ..++++.++++.+++.+.....|..|..+ ||||+++|+||||||||++||+++.+.
T Consensus 97 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~ 176 (216)
T TIGR00960 97 VYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALPMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRD 176 (216)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHH
Confidence 99999642 11 12457899999999998888888777655 899999999999999999999999999
Q ss_pred HHHHHHHhc-CCceEEEeecCcccccc-cCEEEEEeCcEE
Q 037346 1090 IQQTLRQHF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLI 1127 (1156)
Q Consensus 1090 I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~I 1127 (1156)
+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 177 l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 177 IMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999998864 47899999999998875 899999999985
No 462
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.3e-31 Score=292.77 Aligned_cols=186 Identities=20% Similarity=0.296 Sum_probs=163.4
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHH---Hh-hcCeeeccccccccc
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHD---LR-TRLSIIPQDPTMFEG 1022 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---LR-~~i~~VpQdp~LF~g 1022 (1156)
...++|++|+.++++.++|.|+||||||||+++|+|+++|++|+|.+||.++..++... +| +.++|+||++.+|.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 101 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPD 101 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCC
Confidence 35799999999999988999999999999999999999999999999999999887654 33 679999999999875
Q ss_pred -cchhccCCC---CCC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1023 -TTRSNLDPL---EEH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1023 -TIr~Nl~~~---~~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
|+++|+.+. ... .++++.++++..++.+.....|..|..+ |||++.+|+||||||||++||+++.
T Consensus 102 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~ 181 (233)
T PRK11629 102 FTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNA 181 (233)
T ss_pred CCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHH
Confidence 999998641 111 1346889999999988877777666654 8999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCceEEEeecCcccccccCEEEEEeCcEEeeecC
Q 037346 1088 NQIQQTLRQHF--SDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDS 1132 (1156)
Q Consensus 1088 ~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~ 1132 (1156)
..+.+.|++.. +++|||+|||+++.+..+|++++|++|+|++.|+
T Consensus 182 ~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 182 DSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999864 4789999999999999999999999999998876
No 463
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=99.97 E-value=1.9e-31 Score=297.34 Aligned_cols=203 Identities=18% Similarity=0.283 Sum_probs=172.7
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChH---HHhhcCeeeccccccccc-
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLH---DLRTRLSIIPQDPTMFEG- 1022 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~---~LR~~i~~VpQdp~LF~g- 1022 (1156)
...++||+|..++++.++|.|+||||||||+++|+|+++|++|+|.+||.++..++.. .+|++++|+||++.+|.+
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 99 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDM 99 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhhcEEEEecccccCCCC
Confidence 3478999999999998999999999999999999999999999999999999877643 457889999999999986
Q ss_pred cchhccCCC----CCCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1023 TTRSNLDPL----EEHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1023 TIr~Nl~~~----~~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
|+++|+.+. .... ++.+.++++.+++.+.....|..|..+ ||||+++|++|||||||++||+++.
T Consensus 100 tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~ 179 (269)
T PRK11831 100 NVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITM 179 (269)
T ss_pred CHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHH
Confidence 999999631 1122 235778899999988777766666654 8999999999999999999999999
Q ss_pred HHHHHHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHHHHHH
Q 037346 1088 NQIQQTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLVA 1149 (1156)
Q Consensus 1088 ~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~~ 1149 (1156)
+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|++++++++....+..++.
T Consensus 180 ~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~ 244 (269)
T PRK11831 180 GVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPDPRVRQFLD 244 (269)
T ss_pred HHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCcHHHHHHHH
Confidence 999999998743 7899999999998865 9999999999999999999998754444555554
No 464
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=9.7e-32 Score=293.43 Aligned_cols=192 Identities=27% Similarity=0.380 Sum_probs=170.5
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cch
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTR 1025 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr 1025 (1156)
...|+|++|+..+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+. .|+.++++||++.+|.+ |++
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEEEecccccCCCCcHH
Confidence 358999999999999999999999999999999999999999999999999987664 36789999999999976 999
Q ss_pred hccCCCC-------CCCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHH
Q 037346 1026 SNLDPLE-------EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1026 ~Nl~~~~-------~~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
+|+.+.. ...++++.++++..++.++....|..+..+ |||++++|++|||||||++||+.+.+.+.
T Consensus 91 ~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~ 170 (232)
T cd03300 91 ENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQ 170 (232)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHH
Confidence 9986321 112457889999999999988888777765 89999999999999999999999999999
Q ss_pred HHHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCC
Q 037346 1092 QTLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENK 1140 (1156)
Q Consensus 1092 ~~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~ 1140 (1156)
+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.+..
T Consensus 171 ~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~ 222 (232)
T cd03300 171 LELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEP 222 (232)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCC
Confidence 99988753 7899999999998765 8999999999999999999998653
No 465
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.97 E-value=2.3e-31 Score=295.12 Aligned_cols=195 Identities=25% Similarity=0.375 Sum_probs=167.1
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCC-------------hHHHhhcCeee
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIG-------------LHDLRTRLSII 1013 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-------------~~~LR~~i~~V 1013 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++..+. ...+|++++||
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 97 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMV 97 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccccchHHHHHhhceEEE
Confidence 34688888888888888999999999999999999999999999999999986531 35678899999
Q ss_pred ccccccccc-cchhccCCCC----CC----CHHHHHHHHHHcCCChHH-HhhcCCcccc-------ccccccCCCEEEEe
Q 037346 1014 PQDPTMFEG-TTRSNLDPLE----EH----ADEQIWEALDKCQLGDEV-RKKKGKLDSQ-------GRVLLKKSKVLVLD 1076 (1156)
Q Consensus 1014 pQdp~LF~g-TIr~Nl~~~~----~~----~deei~~al~~~~l~~~i-~~lp~gl~s~-------ARALLr~~~ILiLD 1076 (1156)
||++.+|.+ |+++|+.++. .. .++++.++++..++.+.. ...+..+..+ ||||+++|++||||
T Consensus 98 ~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllD 177 (257)
T PRK10619 98 FQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFD 177 (257)
T ss_pred ecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999975 9999996421 11 135688999999998875 5555555544 89999999999999
Q ss_pred cCCcCCCHHHHHHHHHHHHHhc-CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCC
Q 037346 1077 EATASVDTATDNQIQQTLRQHF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKS 1141 (1156)
Q Consensus 1077 EaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~ 1141 (1156)
|||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||||++|++|++++.|+++++++.+.
T Consensus 178 EPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 244 (257)
T PRK10619 178 EPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQLFGNPQ 244 (257)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhhhCcc
Confidence 9999999999999999998875 47999999999999886 89999999999999999999986543
No 466
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1e-31 Score=289.61 Aligned_cols=182 Identities=23% Similarity=0.359 Sum_probs=159.6
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccccccc-ccchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFE-GTTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~-gTIr~ 1026 (1156)
..++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+ ..+++++||||+|.+|. .|+++
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~~v~q~~~~~~~~tv~~ 91 (213)
T cd03259 14 RALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIGMVFQDYALFPHLTVAE 91 (213)
T ss_pred eeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEEEEcCchhhccCCcHHH
Confidence 4799999999999999999999999999999999999999999999999998754 35778999999999886 59999
Q ss_pred ccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.... ... ++++.++++..++.++....|..|..+ ||||+++|++|||||||++||+++...+.+
T Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~ 171 (213)
T cd03259 92 NIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELRE 171 (213)
T ss_pred HHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH
Confidence 996431 111 346889999999998887777777655 899999999999999999999999999999
Q ss_pred HHHHhc--CCceEEEeecCcccccc-cCEEEEEeCcEEeeec
Q 037346 1093 TLRQHF--SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYD 1131 (1156)
Q Consensus 1093 ~l~~~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G 1131 (1156)
.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 172 ~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 172 ELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999864 37899999999998754 9999999999999876
No 467
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.8e-31 Score=295.63 Aligned_cols=198 Identities=28% Similarity=0.382 Sum_probs=166.6
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccC-----CCceEEEcCeeCC--CCChHHHhhcCeeeccccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVES-----TAGHILIDGKDIS--LIGLHDLRTRLSIIPQDPTMF 1020 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~--~i~~~~LR~~i~~VpQdp~LF 1020 (1156)
-.++|++|+..+++.++|.|+||||||||+++|+|+++| ++|+|.+||.++. +.+...+|++++++||++.+|
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 478999999999998999999999999999999999987 4999999999997 456667889999999999999
Q ss_pred cc-cchhccCCC---CC--CC----HHHHHHHHHHcCCChHH----HhhcCCcccc-------ccccccCCCEEEEecCC
Q 037346 1021 EG-TTRSNLDPL---EE--HA----DEQIWEALDKCQLGDEV----RKKKGKLDSQ-------GRVLLKKSKVLVLDEAT 1079 (1156)
Q Consensus 1021 ~g-TIr~Nl~~~---~~--~~----deei~~al~~~~l~~~i----~~lp~gl~s~-------ARALLr~~~ILiLDEaT 1079 (1156)
.+ |+++|+.+. .. .. ++++.++++.+++.+.+ ...+..|..+ ||||+++|++|||||||
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~ 177 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLVIARALAMKPKILLMDEPT 177 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 76 999999642 11 01 24578899999986433 2334444433 89999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHH
Q 037346 1080 ASVDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFA 1145 (1156)
Q Consensus 1080 S~LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~ 1145 (1156)
++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++++++...|.
T Consensus 178 ~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 244 (253)
T PRK14267 178 ANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVFENPEHELT 244 (253)
T ss_pred ccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhCCCcHHH
Confidence 999999999999999988777999999999998765 999999999999999999999865433343
No 468
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.97 E-value=2.5e-31 Score=295.88 Aligned_cols=202 Identities=25% Similarity=0.323 Sum_probs=169.8
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHH---HhhcCeeeccccc--cc-
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHD---LRTRLSIIPQDPT--MF- 1020 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~---LR~~i~~VpQdp~--LF- 1020 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++..++... +|+.+++|||+|. ++
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 103 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVNP 103 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcCC
Confidence 45799999999999999999999999999999999999999999999999998877644 6788999999983 44
Q ss_pred cccchhccCCC-------CC-CCHHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCH
Q 037346 1021 EGTTRSNLDPL-------EE-HADEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDT 1084 (1156)
Q Consensus 1021 ~gTIr~Nl~~~-------~~-~~deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~ 1084 (1156)
..|+++|+... .. ..++++.++++..++. +.....+..|..+ ||||+.+|+||||||||++||+
T Consensus 104 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~ 183 (265)
T TIGR02769 104 RMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDM 183 (265)
T ss_pred CCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 46999998421 11 1245688999999996 4455555555544 8999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChHHHHH
Q 037346 1085 ATDNQIQQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSFAQLV 1148 (1156)
Q Consensus 1085 ~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~~l~ 1148 (1156)
++...+.+.|+++.+ ++|+|+|||+++.+. .||+|++|++|++++.|++++++...+..++++.
T Consensus 184 ~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 184 VLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHcCCCCHHHHHHH
Confidence 999999999998753 789999999999987 4999999999999999999999875444454454
No 469
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=99.97 E-value=1.5e-31 Score=307.04 Aligned_cols=195 Identities=20% Similarity=0.348 Sum_probs=170.0
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCC--ceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTA--GHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TT 1024 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~--G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TI 1024 (1156)
..++|++|...+++.++|.||||||||||+++|.|+++|++ |+|.+||.++.+.+. .++.|++|+|++.+|.. |+
T Consensus 19 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~r~ig~vfQ~~~l~p~~tv 96 (362)
T TIGR03258 19 TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HKRGLALLFQNYALFPHLKV 96 (362)
T ss_pred EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HHCCEEEEECCcccCCCCcH
Confidence 35777777777787788999999999999999999999999 999999999987665 35789999999999976 99
Q ss_pred hhccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHH
Q 037346 1025 RSNLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQI 1090 (1156)
Q Consensus 1025 r~Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I 1090 (1156)
++||.+.- ..+ ++++.++++.++|.++....|..|..+ ||||+++|++||||||||+||+.+...+
T Consensus 97 ~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l 176 (362)
T TIGR03258 97 EDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANM 176 (362)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHH
Confidence 99997521 122 345888999999999998888888755 8999999999999999999999999999
Q ss_pred HHHHHHhcC---CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1091 QQTLRQHFS---DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1091 ~~~l~~~~~---~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
.+.|++..+ +.|+|+|||+++.+. -||+|+||++|++++.|+|+++..++...|
T Consensus 177 ~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p~~~~ 234 (362)
T TIGR03258 177 REEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAPADGF 234 (362)
T ss_pred HHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcCcHH
Confidence 999987654 689999999998865 599999999999999999999998765544
No 470
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=99.97 E-value=9.2e-32 Score=299.72 Aligned_cols=197 Identities=23% Similarity=0.364 Sum_probs=173.4
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cch
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTR 1025 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr 1025 (1156)
...++|+|+...+++-++|-|||||||||++++|+||..|++|+|.+||.|+.+++++ ++.|++|+|+--||.- ||+
T Consensus 18 ~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ig~VFQ~YALFPHltV~ 95 (352)
T COG3842 18 FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPIGMVFQSYALFPHMTVE 95 (352)
T ss_pred eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcccceeecCcccCCCCcHH
Confidence 5677788888888887788899999999999999999999999999999999999887 5789999999999965 999
Q ss_pred hccCCCCC----CC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHH
Q 037346 1026 SNLDPLEE----HA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQI 1090 (1156)
Q Consensus 1026 ~Nl~~~~~----~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I 1090 (1156)
+|+.++=. .. ++.+.++|+.++|.++-...|..|.-+ ||||..+|++|+||||-|+||.+-...+
T Consensus 96 ~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~m 175 (352)
T COG3842 96 ENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQM 175 (352)
T ss_pred HHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHH
Confidence 99987521 22 246899999999999999988888755 8999999999999999999999999999
Q ss_pred HHHHHHhc--CCceEEEeecCcc-cccccCEEEEEeCcEEeeecChhHHhcCCCChHH
Q 037346 1091 QQTLRQHF--SDCTVVTIAHRIT-SVLDSAMVLLLNHGLIKEYDSPTKLLENKSSSFA 1145 (1156)
Q Consensus 1091 ~~~l~~~~--~~~TvI~IaHrl~-ti~~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~ 1145 (1156)
+.-+++.. .+.|.|.|||+-+ .+.-+|||.||++|+|...|+|+|+..++...|-
T Consensus 176 r~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~~~fV 233 (352)
T COG3842 176 RKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPATRFV 233 (352)
T ss_pred HHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcchHHH
Confidence 98887654 3789999999975 4667999999999999999999999998776553
No 471
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.5e-31 Score=299.83 Aligned_cols=192 Identities=20% Similarity=0.369 Sum_probs=171.2
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCC-hHHHhhcCeeeccccc--cccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIG-LHDLRTRLSIIPQDPT--MFEGTT 1024 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~LR~~i~~VpQdp~--LF~gTI 1024 (1156)
-.++||+|...+++.++|.|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+|+++++|||+|. +|..|+
T Consensus 24 ~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~v 103 (280)
T PRK13633 24 LALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVATIV 103 (280)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHHhhheEEEecChhhhhccccH
Confidence 4899999999999989999999999999999999999999999999999998654 4567899999999984 777789
Q ss_pred hhccCCCCC---CC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHH
Q 037346 1025 RSNLDPLEE---HA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQI 1090 (1156)
Q Consensus 1025 r~Nl~~~~~---~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I 1090 (1156)
.+|+.+... .. ++++.++++.+++.++....|..|..+ ||||+++|++|||||||++||+.+...+
T Consensus 104 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l 183 (280)
T PRK13633 104 EEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREV 183 (280)
T ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHH
Confidence 999965321 12 356889999999999988888888766 8999999999999999999999999999
Q ss_pred HHHHHHhc--CCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1091 QQTLRQHF--SDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1091 ~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
.+.|+++. .++|||+|||+++.+..||+|++|++|+|++.|+++++..+
T Consensus 184 ~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 184 VNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999874 37899999999999988999999999999999999999864
No 472
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.9e-31 Score=293.34 Aligned_cols=198 Identities=28% Similarity=0.382 Sum_probs=168.8
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccC-----CCceEEEcCeeCCCCChHHHhhcCeeeccccccc-c
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVES-----TAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMF-E 1021 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF-~ 1021 (1156)
..++|++|+.++++.++|.|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+|+.++++||+|.+| +
T Consensus 17 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 17 EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 478999999999999999999999999999999999974 6999999999999888888999999999999755 6
Q ss_pred ccchhccCCCC---C---C---CHHHHHHHHHHcCCChHH----HhhcCCcccc-------ccccccCCCEEEEecCCcC
Q 037346 1022 GTTRSNLDPLE---E---H---ADEQIWEALDKCQLGDEV----RKKKGKLDSQ-------GRVLLKKSKVLVLDEATAS 1081 (1156)
Q Consensus 1022 gTIr~Nl~~~~---~---~---~deei~~al~~~~l~~~i----~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~ 1081 (1156)
.|+++|+.+.. . . .++++.++++.+++.+.+ ...+..|..+ ||||+++|+||||||||++
T Consensus 97 ~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~ 176 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIARALAFQPEVLLADEPTAN 176 (250)
T ss_pred CcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCcc
Confidence 79999996421 1 1 135688999999986543 3334444433 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChHH
Q 037346 1082 VDTATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSFA 1145 (1156)
Q Consensus 1082 LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~ 1145 (1156)
||+.+...+.+.|++..+++|+|+|+|+++.+. .||+|++|++|++++.|+++++.+++...+.
T Consensus 177 LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 241 (250)
T PRK14247 177 LDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFTNPRHELT 241 (250)
T ss_pred CCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHcCCccHHH
Confidence 999999999999998877899999999999875 5999999999999999999999876544343
No 473
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.9e-31 Score=295.28 Aligned_cols=194 Identities=22% Similarity=0.372 Sum_probs=163.6
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhccc-----CCCceEEEcCeeCCC--CChHHHhhcCeeeccccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVE-----STAGHILIDGKDISL--IGLHDLRTRLSIIPQDPTMF 1020 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~~~LR~~i~~VpQdp~LF 1020 (1156)
..++|++|+..+++.++|.|+||||||||+++|+|+++ |++|+|.+||.++.. .+...+|++++||||++.+|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 35777777777788788999999999999999999975 589999999999875 34567889999999999999
Q ss_pred cccchhccCCC----CC----CCHHHHHHHHHHcCCChHH----HhhcCCcccc-------ccccccCCCEEEEecCCcC
Q 037346 1021 EGTTRSNLDPL----EE----HADEQIWEALDKCQLGDEV----RKKKGKLDSQ-------GRVLLKKSKVLVLDEATAS 1081 (1156)
Q Consensus 1021 ~gTIr~Nl~~~----~~----~~deei~~al~~~~l~~~i----~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~ 1081 (1156)
..|+++|+.+. .. ..++++.++++.+++.+.+ ...+..|..+ ||||+++|+||||||||++
T Consensus 100 ~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~ 179 (253)
T PRK14242 100 PKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCIARALAVEPEVLLMDEPASA 179 (253)
T ss_pred cCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 99999999642 11 1235688899999997643 3334444433 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCC
Q 037346 1082 VDTATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKS 1141 (1156)
Q Consensus 1082 LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~ 1141 (1156)
||+.+...+.+.|++..+++|||++||+++.+. .||+|++|++|+|++.|+++++.+.+.
T Consensus 180 LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 240 (253)
T PRK14242 180 LDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFTRPR 240 (253)
T ss_pred CCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHcCCC
Confidence 999999999999998866789999999999885 599999999999999999999986543
No 474
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=2e-31 Score=288.79 Aligned_cols=188 Identities=24% Similarity=0.325 Sum_probs=164.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~ 1026 (1156)
-.++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.++|.++... ...+|++++|+||++.+|.+ |+++
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~~~q~~~~~~~~tv~~ 92 (220)
T cd03265 14 EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGIVFQDLSVDDELTGWE 92 (220)
T ss_pred EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEEecCCccccccCcHHH
Confidence 478999999999999999999999999999999999999999999999998763 35678899999999998875 9999
Q ss_pred ccCCC----CC-C--CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPL----EE-H--ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~----~~-~--~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.+. +. . .++++.++++.+++.+.....|..|..+ |||++.+|++|||||||++||+++.+.+.+
T Consensus 93 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~ 172 (220)
T cd03265 93 NLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWE 172 (220)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHH
Confidence 99542 11 1 2356889999999988877777766655 899999999999999999999999999999
Q ss_pred HHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHH
Q 037346 1093 TLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKL 1136 (1156)
Q Consensus 1093 ~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eL 1136 (1156)
.|++..+ ++|||+|+|+++.+.. ||+|++|++|+|++.|+++++
T Consensus 173 ~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 173 YIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9988653 6899999999998865 999999999999999998874
No 475
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.1e-31 Score=294.72 Aligned_cols=198 Identities=21% Similarity=0.339 Sum_probs=165.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhccc-----CCCceEEEcCeeCCC--CChHHHhhcCeeeccccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVE-----STAGHILIDGKDISL--IGLHDLRTRLSIIPQDPTMF 1020 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~~~LR~~i~~VpQdp~LF 1020 (1156)
-.++|++|...+++.++|.|+||||||||+++|+|+++ |++|+|.+||.++.. .+...+|+.+++++|++.+|
T Consensus 18 ~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14251 18 EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTPF 97 (251)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCccC
Confidence 47888999988898889999999999999999999997 479999999999864 34567788999999999999
Q ss_pred cccchhccCCCC---CC-----CHHHHHHHHHHcCCCh----HHHhhcCCcccc-------ccccccCCCEEEEecCCcC
Q 037346 1021 EGTTRSNLDPLE---EH-----ADEQIWEALDKCQLGD----EVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATAS 1081 (1156)
Q Consensus 1021 ~gTIr~Nl~~~~---~~-----~deei~~al~~~~l~~----~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~ 1081 (1156)
+.|+++|+.+.. .. .++++.++++.++++. .....+..|..+ ||||+++|++|||||||++
T Consensus 98 ~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~ 177 (251)
T PRK14251 98 PFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSA 177 (251)
T ss_pred CCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCcc
Confidence 999999997431 11 1345778899999853 233334444433 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChHH
Q 037346 1082 VDTATDNQIQQTLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSFA 1145 (1156)
Q Consensus 1082 LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f~ 1145 (1156)
||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.-.|.
T Consensus 178 LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 242 (251)
T PRK14251 178 LDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMFIAPKKQIT 242 (251)
T ss_pred CCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHHhCCCCHHH
Confidence 9999999999999988777899999999998765 999999999999999999999865443343
No 476
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2e-31 Score=297.53 Aligned_cols=191 Identities=21% Similarity=0.347 Sum_probs=169.7
Q ss_pred EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCC-hHHHhhcCeeeccccc--cccccch
Q 037346 949 NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIG-LHDLRTRLSIIPQDPT--MFEGTTR 1025 (1156)
Q Consensus 949 ~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-~~~LR~~i~~VpQdp~--LF~gTIr 1025 (1156)
.++||+|+..+++.++|.|+||||||||+++|+|+++|++|+|.++|.++...+ ...+|+.++++||+|. ++..|++
T Consensus 17 ~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~ 96 (274)
T PRK13644 17 ALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTVE 96 (274)
T ss_pred eeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEEEEEChhhhcccchHH
Confidence 789999999999999999999999999999999999999999999999998775 4678889999999985 6778999
Q ss_pred hccCCCCC---CC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHH
Q 037346 1026 SNLDPLEE---HA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQ 1091 (1156)
Q Consensus 1026 ~Nl~~~~~---~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~ 1091 (1156)
+||.+... .+ ++++.++++..++.++....|..|..+ ||||+++|+||||||||++||+.+...+.
T Consensus 97 enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~ 176 (274)
T PRK13644 97 EDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVL 176 (274)
T ss_pred HHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 99975321 12 356788999999988887777766654 89999999999999999999999999999
Q ss_pred HHHHHhc-CCceEEEeecCcccccccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1092 QTLRQHF-SDCTVVTIAHRITSVLDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1092 ~~l~~~~-~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 177 ~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 177 ERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9998764 47899999999999999999999999999999999998754
No 477
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.2e-31 Score=292.76 Aligned_cols=192 Identities=22% Similarity=0.311 Sum_probs=167.2
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCC------CCChHHHhhcCeeecccccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDIS------LIGLHDLRTRLSIIPQDPTMFE 1021 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~------~i~~~~LR~~i~~VpQdp~LF~ 1021 (1156)
-.++||+|+..+++.++|.|+||||||||+++|+|+++|++|+|.+||.++. ......+|++++|+||++.+|.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYNLWP 95 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHHhheEEEecCccccC
Confidence 3789999999999999999999999999999999999999999999999874 2234677889999999999997
Q ss_pred c-cchhccCCC-----CCC---CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHH
Q 037346 1022 G-TTRSNLDPL-----EEH---ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTA 1085 (1156)
Q Consensus 1022 g-TIr~Nl~~~-----~~~---~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~ 1085 (1156)
+ |+++|+..+ +.. ..+++.++++..++.+++...|..|..+ |||++++|+||||||||++||++
T Consensus 96 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~ 175 (242)
T PRK11124 96 HLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPE 175 (242)
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHH
Confidence 5 999999631 111 1345788899999988888878777755 89999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcC
Q 037346 1086 TDNQIQQTLRQHF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1086 te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 176 ~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 231 (242)
T PRK11124 176 ITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQP 231 (242)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcCc
Confidence 9999999998865 37899999999999865 999999999999999999987653
No 478
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.3e-31 Score=295.18 Aligned_cols=197 Identities=23% Similarity=0.349 Sum_probs=164.4
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccC-----CCceEEEcCeeCCCC--ChHHHhhcCeeeccccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVES-----TAGHILIDGKDISLI--GLHDLRTRLSIIPQDPTMF 1020 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~~~LR~~i~~VpQdp~LF 1020 (1156)
..++|++|+..+++.++|.|+||||||||+++|+|+++| ++|+|.+||.++... +...+|+.++||||++.+|
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 467888888888888889999999999999999999985 799999999998753 3456788999999999999
Q ss_pred cccchhccCCCC---CCC----HHHHHHHHHHcCCChH----HHhhcCCcccc-------ccccccCCCEEEEecCCcCC
Q 037346 1021 EGTTRSNLDPLE---EHA----DEQIWEALDKCQLGDE----VRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASV 1082 (1156)
Q Consensus 1021 ~gTIr~Nl~~~~---~~~----deei~~al~~~~l~~~----i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~L 1082 (1156)
..|+++|+.+.. ..+ ++++.++++.+++.+. ....+..|..+ ||||+++|+||||||||++|
T Consensus 106 ~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~L 185 (258)
T PRK14268 106 PMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSAL 185 (258)
T ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCccc
Confidence 999999996421 122 2357889999998532 23333344433 89999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1083 DTATDNQIQQTLRQHFSDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1083 D~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
|+++...+.+.|+++.+++|+|+|||+++.+.+ ||+|++|++|+|++.|+++++.+++...|
T Consensus 186 D~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~ 248 (258)
T PRK14268 186 DPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHNPREKS 248 (258)
T ss_pred CHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCCCHH
Confidence 999999999999988678999999999998865 99999999999999999999987654443
No 479
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=99.97 E-value=1.7e-31 Score=293.23 Aligned_cols=193 Identities=23% Similarity=0.351 Sum_probs=168.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCC--ChHHHhhcCeeecccccccc-ccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLI--GLHDLRTRLSIIPQDPTMFE-GTT 1024 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i--~~~~LR~~i~~VpQdp~LF~-gTI 1024 (1156)
-.++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++... +...+|++++|+||++.+|. .|+
T Consensus 15 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 94 (240)
T PRK09493 15 QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTA 94 (240)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceEEEecccccCCCCcH
Confidence 369999999999999999999999999999999999999999999999999864 34577889999999999886 599
Q ss_pred hhccCCCC----CC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHH
Q 037346 1025 RSNLDPLE----EH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQ 1089 (1156)
Q Consensus 1025 r~Nl~~~~----~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~ 1089 (1156)
++|+.+.. .. .++++.++++..++.+.....|..|..+ |||++++|+||||||||++||+++...
T Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~ 174 (240)
T PRK09493 95 LENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHE 174 (240)
T ss_pred HHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHH
Confidence 99996531 11 1345788999999988877777777655 899999999999999999999999999
Q ss_pred HHHHHHHhc-CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCC
Q 037346 1090 IQQTLRQHF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENK 1140 (1156)
Q Consensus 1090 I~~~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~ 1140 (1156)
+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 175 l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 175 VLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 999998864 47899999999999864 9999999999999999999988643
No 480
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=99.97 E-value=3.5e-31 Score=273.51 Aligned_cols=195 Identities=25% Similarity=0.408 Sum_probs=159.3
Q ss_pred CCccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-----------
Q 037346 354 SDTAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT----------- 422 (1156)
Q Consensus 354 ~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~----------- 422 (1156)
.+..|+++|+++.|. ++++|+|+|++|++||..+|+|||||||||||++++|+++|++|.+.+.|+
T Consensus 28 ~~~li~l~~v~v~r~---gk~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~pssg~~~~~G~~~G~~~~~~el 104 (257)
T COG1119 28 NEPLIELKNVSVRRN---GKKILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPSSGDVTLLGRRFGKGETIFEL 104 (257)
T ss_pred CcceEEecceEEEEC---CEeeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCCCCceeeeeeeccCCcchHHH
Confidence 345699999999996 678999999999999999999999999999999999999999999988773
Q ss_pred ---EEEEecCC---cCCCccHHHHhhcC---------CCCCHHHH---HHHHHHhCCchhhhhCCCCCccccccCCCCCC
Q 037346 423 ---KAYVAQSP---WIQSGKIEENILFG---------KEMDRERY---ERVLEACSLKKDLEVLPFGDQTIIGERGINLS 484 (1156)
Q Consensus 423 ---~~~v~Q~~---~~~~~ti~eni~~~---------~~~~~~~~---~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LS 484 (1156)
||||+-+- ...+.+++|-|+-| .+++++.+ ...++.+++.+ ..++...+||
T Consensus 105 rk~IG~vS~~L~~~~~~~~~v~dvVlSg~~~siG~y~~~~~~~~~~~a~~lle~~g~~~-----------la~r~~~~LS 173 (257)
T COG1119 105 RKRIGLVSSELHERFRVRETVRDVVLSGFFASIGIYQEDLTAEDLAAAQWLLELLGAKH-----------LADRPFGSLS 173 (257)
T ss_pred HHHhCccCHHHHhhcccccccceeeeecccccccccccCCCHHHHHHHHHHHHHcchhh-----------hccCchhhcC
Confidence 57876432 22355788877643 13455444 34556666544 2245557899
Q ss_pred HHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh----cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEE
Q 037346 485 GGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV----SSSKTVIYATHQVEFLP-AADLILVIKDGKITQ 559 (1156)
Q Consensus 485 gGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~----~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~ 559 (1156)
-|||||+-|||||+.+|++||||||+++||...++.+.+.+.. ..+.++|+|||+.+.+. ..++++.+++|+++.
T Consensus 174 ~Ge~rrvLiaRALv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~eEi~~~~th~lll~~g~v~~ 253 (257)
T COG1119 174 QGEQRRVLIARALVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAEEIPPCFTHRLLLKEGEVVA 253 (257)
T ss_pred HhHHHHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchhhcccccceEEEeeCCceee
Confidence 9999999999999999999999999999999999888776543 34679999999999886 589999999999998
Q ss_pred ccC
Q 037346 560 AGK 562 (1156)
Q Consensus 560 ~g~ 562 (1156)
+|.
T Consensus 254 ~g~ 256 (257)
T COG1119 254 QGK 256 (257)
T ss_pred ccc
Confidence 874
No 481
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2e-31 Score=295.23 Aligned_cols=192 Identities=22% Similarity=0.375 Sum_probs=170.8
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cch
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTR 1025 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr 1025 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.++|.++.+++...+|+.++|+||++.+|.+ |++
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 94 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGITVR 94 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCccHH
Confidence 3579999999999998999999999999999999999999999999999999988888889999999999998876 999
Q ss_pred hccCCCC--------C---CCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1026 SNLDPLE--------E---HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1026 ~Nl~~~~--------~---~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
+|++++. . ..++++.++++.+++.+.....+..|..+ |||++++|++|||||||++||+++.
T Consensus 95 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~ 174 (255)
T PRK11231 95 ELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQ 174 (255)
T ss_pred HHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHH
Confidence 9997531 1 11346888999999988877777666655 8999999999999999999999999
Q ss_pred HHHHHHHHHhc-CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhc
Q 037346 1088 NQIQQTLRQHF-SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLE 1138 (1156)
Q Consensus 1088 ~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~ 1138 (1156)
+.+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 175 ~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 175 VELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 99999998864 4789999999999876 599999999999999999999875
No 482
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=99.97 E-value=1.8e-31 Score=286.65 Aligned_cols=182 Identities=21% Similarity=0.321 Sum_probs=161.5
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccc-cccchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMF-EGTTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF-~gTIr~ 1026 (1156)
-.++|++|...+++.++|.|+||||||||+++|+|+.+|++|+|.++|.++.+. ..+|+++++|||++.+| +.|+++
T Consensus 14 ~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~tv~e 91 (208)
T cd03268 14 RVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGALIEAPGFYPNLTARE 91 (208)
T ss_pred EeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEEecCCCccCccCcHHH
Confidence 479999999999999999999999999999999999999999999999998765 56788999999999887 579999
Q ss_pred ccCCCC---CCCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHH
Q 037346 1027 NLDPLE---EHADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQ 1096 (1156)
Q Consensus 1027 Nl~~~~---~~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~ 1096 (1156)
|+.+.. ...++++.++++..++.+.....+..|..+ |||++++|++|||||||++||+.+.+.+.+.|++
T Consensus 92 ~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~ 171 (208)
T cd03268 92 NLRLLARLLGIRKKRIDEVLDVVGLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILS 171 (208)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHH
Confidence 996431 234677899999999988887777666655 8999999999999999999999999999999987
Q ss_pred hc-CCceEEEeecCcccccc-cCEEEEEeCcEEeeec
Q 037346 1097 HF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYD 1131 (1156)
Q Consensus 1097 ~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G 1131 (1156)
.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 172 ~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 172 LRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred HHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 65 47899999999998864 9999999999999875
No 483
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.3e-31 Score=307.17 Aligned_cols=194 Identities=22% Similarity=0.367 Sum_probs=167.5
Q ss_pred EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchhc
Q 037346 949 NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRSN 1027 (1156)
Q Consensus 949 ~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~N 1027 (1156)
.++|++|...+++-++|.|+||||||||+++|.|+.+|++|+|.+||.++.+++. .|+.++||+|++.||.. |++||
T Consensus 34 ~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ig~vfQ~~~lfp~ltv~eN 111 (377)
T PRK11607 34 AVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPINMMFQSYALFPHMTVEQN 111 (377)
T ss_pred EEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCEEEEeCCCccCCCCCHHHH
Confidence 4566666666777778889999999999999999999999999999999987764 47789999999999976 99999
Q ss_pred cCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHH
Q 037346 1028 LDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQT 1093 (1156)
Q Consensus 1028 l~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~ 1093 (1156)
+.+.- ..+ .+++.++++..++.++....|..|..+ ||||+++|++|+||||||+||..+...+.+.
T Consensus 112 i~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~ 191 (377)
T PRK11607 112 IAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLE 191 (377)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 97531 122 356789999999999888888888765 8999999999999999999999999999888
Q ss_pred HHHhc--CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCChH
Q 037346 1094 LRQHF--SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSSSF 1144 (1156)
Q Consensus 1094 l~~~~--~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g~f 1144 (1156)
|++.. .+.|+|+|||+++.+. -||+|+||++|+|++.|+|+++..++...|
T Consensus 192 l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~ 245 (377)
T PRK11607 192 VVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRY 245 (377)
T ss_pred HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHH
Confidence 87654 3789999999999864 599999999999999999999998766554
No 484
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=99.97 E-value=1.6e-31 Score=302.18 Aligned_cols=191 Identities=23% Similarity=0.319 Sum_probs=165.7
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeecccccccc-ccchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFE-GTTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~-gTIr~ 1026 (1156)
..++||||+.++++.++|.||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++||||||++.+|. .|++|
T Consensus 21 ~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ig~v~q~~~~~~~~tv~e 99 (306)
T PRK13537 21 LVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRVGVVPQFDNLDPDFTVRE 99 (306)
T ss_pred EEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcEEEEeccCcCCCCCcHHH
Confidence 4678888888888888899999999999999999999999999999999998755 457899999999999886 69999
Q ss_pred ccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.++. ..+ .+.+.++++.+++.+.....+..|..+ ||||+.+|++|||||||++||+.+.+.+.+
T Consensus 100 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~ 179 (306)
T PRK13537 100 NLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWE 179 (306)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHH
Confidence 997422 112 245678899999987766666666544 899999999999999999999999999999
Q ss_pred HHHHhc-CCceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcC
Q 037346 1093 TLRQHF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1093 ~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
.|+++. +++|||++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 180 ~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 180 RLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 999875 47899999999999865 999999999999999999999754
No 485
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=4.2e-31 Score=292.85 Aligned_cols=199 Identities=21% Similarity=0.316 Sum_probs=168.9
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccC-----CCceEEEcCeeCCCC--ChHHHhhcCeeecccccc
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVES-----TAGHILIDGKDISLI--GLHDLRTRLSIIPQDPTM 1019 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~~~~LR~~i~~VpQdp~L 1019 (1156)
...++|++|..++++.++|.|+||||||||+++|.|+++| ++|+|.+||.++... ....+|+.++++||++.+
T Consensus 21 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 100 (261)
T PRK14263 21 FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPNP 100 (261)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCcc
Confidence 4689999999999999999999999999999999999987 799999999998753 445678899999999999
Q ss_pred ccccchhccCCCCC------CCHHHHHHHHHHcCCChHHHhh----cCCcccc-------ccccccCCCEEEEecCCcCC
Q 037346 1020 FEGTTRSNLDPLEE------HADEQIWEALDKCQLGDEVRKK----KGKLDSQ-------GRVLLKKSKVLVLDEATASV 1082 (1156)
Q Consensus 1020 F~gTIr~Nl~~~~~------~~deei~~al~~~~l~~~i~~l----p~gl~s~-------ARALLr~~~ILiLDEaTS~L 1082 (1156)
|..|+++|+.+... ...+++.++++.+++.+.+... +..|..+ ||||+++|+||||||||++|
T Consensus 101 ~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgL 180 (261)
T PRK14263 101 FSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSAL 180 (261)
T ss_pred ccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccC
Confidence 99999999975321 1235788999999997655322 2233332 89999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEe--------CcEEeeecChhHHhcCCCChHH
Q 037346 1083 DTATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLN--------HGLIKEYDSPTKLLENKSSSFA 1145 (1156)
Q Consensus 1083 D~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~--------~G~IvE~G~~~eLl~~~~g~f~ 1145 (1156)
|+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|+ +|++++.|+++++++++...+.
T Consensus 181 D~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 252 (261)
T PRK14263 181 DPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPTAQIFQNPREQLT 252 (261)
T ss_pred CHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCHHHHHhCCCcHHH
Confidence 99999999999999877889999999999876 499999996 8999999999999875443343
No 486
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.9e-31 Score=287.06 Aligned_cols=178 Identities=25% Similarity=0.372 Sum_probs=158.4
Q ss_pred EEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchhccCC
Q 037346 952 HLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRSNLDP 1030 (1156)
Q Consensus 952 ~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~Nl~~ 1030 (1156)
|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+. .|+.++++||++.+|.+ |+++|+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEEEecccccCCCCcHHHHHhc
Confidence 8889988999899999999999999999999999999999999999987654 46789999999999976 99999974
Q ss_pred CCC-------CCHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHHHHHH
Q 037346 1031 LEE-------HADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQTLRQ 1096 (1156)
Q Consensus 1031 ~~~-------~~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~~l~~ 1096 (1156)
... ..++++.++++.+++.+.....|..|..+ |||++++|++|||||||++||+++...+.+.|++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~ 173 (211)
T cd03298 94 GLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLD 173 (211)
T ss_pred ccccccCccHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 321 12457899999999998888888877765 8999999999999999999999999999999998
Q ss_pred hc--CCceEEEeecCcccccc-cCEEEEEeCcEEeeec
Q 037346 1097 HF--SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYD 1131 (1156)
Q Consensus 1097 ~~--~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G 1131 (1156)
.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 174 ~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 174 LHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 75 37899999999999865 9999999999999865
No 487
>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.97 E-value=2.1e-31 Score=292.65 Aligned_cols=186 Identities=20% Similarity=0.275 Sum_probs=148.1
Q ss_pred eeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEE-----------EcCe-------
Q 037346 361 IDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIR-----------LCGT------- 422 (1156)
Q Consensus 361 ~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~-----------~~g~------- 422 (1156)
.+++++|+. ...+|+|+|+ +++||+++|+||||||||||+++|+|+++|++|+|. ++|.
T Consensus 4 ~~~~~~y~~--~~~~l~~i~~-i~~Ge~~~IvG~nGsGKSTLlk~l~Gl~~p~~G~I~~~~~~~~~~~~~~g~~~~~~~~ 80 (255)
T cd03236 4 DEPVHRYGP--NSFKLHRLPV-PREGQVLGLVGPNGIGKSTALKILAGKLKPNLGKFDDPPDWDEILDEFRGSELQNYFT 80 (255)
T ss_pred cCcceeecC--cchhhhcCCC-CCCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEeeccccchhhhhccCchhhhhhH
Confidence 368899962 3369999995 999999999999999999999999999999999995 5552
Q ss_pred --------EEEEecCCcCCCccHHHHhhcCCC--CCHHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 423 --------KAYVAQSPWIQSGKIEENILFGKE--MDRERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 423 --------~~~v~Q~~~~~~~ti~eni~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
++|++|++..+..++.+|+.+... ..+++..++++.+++.+.. ...+.+||||||||++
T Consensus 81 ~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv~ 149 (255)
T cd03236 81 KLLEGDVKVIVKPQYVDLIPKAVKGKVGELLKKKDERGKLDELVDQLELRHVL-----------DRNIDQLSGGELQRVA 149 (255)
T ss_pred HhhhcccceeeecchhccCchHHHHHHHHHhchhHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 478888877665566666554311 1235566777777765433 3456789999999999
Q ss_pred HHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 493 IARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 493 lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
||||++.+|+++||||||++||+.+.+.+.+.+.. .+++|+|++||+++.+. .||+|++|+ |++.+.|
T Consensus 150 laral~~~p~illlDEPts~LD~~~~~~l~~~l~~l~~~~~tIIiiSHd~~~~~~~ad~i~~l~-~~~~~~~ 220 (255)
T cd03236 150 IAAALARDADFYFFDEPSSYLDIKQRLNAARLIRELAEDDNYVLVVEHDLAVLDYLSDYIHCLY-GEPGAYG 220 (255)
T ss_pred HHHHHHhCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEC-CCCCcce
Confidence 99999999999999999999999999888766543 35799999999999987 599999995 5555433
No 488
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2e-31 Score=300.65 Aligned_cols=192 Identities=19% Similarity=0.256 Sum_probs=166.5
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCC------------------------CCh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISL------------------------IGL 1003 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~------------------------i~~ 1003 (1156)
..|+||+|...+++.++|.|+||||||||+++|.|+++|++|+|++||.++.. .+.
T Consensus 21 ~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (305)
T PRK13651 21 KALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKI 100 (305)
T ss_pred cceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccccccccccccccccccchH
Confidence 57999999999999999999999999999999999999999999999987632 134
Q ss_pred HHHhhcCeeecccc--ccccccchhccCCCC---CCC----HHHHHHHHHHcCCC-hHHHhhcCCcccc-------cccc
Q 037346 1004 HDLRTRLSIIPQDP--TMFEGTTRSNLDPLE---EHA----DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVL 1066 (1156)
Q Consensus 1004 ~~LR~~i~~VpQdp--~LF~gTIr~Nl~~~~---~~~----deei~~al~~~~l~-~~i~~lp~gl~s~-------ARAL 1066 (1156)
..+|++++||||+| .+|..|+++||.++. ..+ ++++.++++.+||. ++....|..|..+ ||||
T Consensus 101 ~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqrvalA~aL 180 (305)
T PRK13651 101 KEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQRSPFELSGGQKRRVALAGIL 180 (305)
T ss_pred HHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 67889999999986 688899999997532 122 34578999999996 6777777766654 8999
Q ss_pred ccCCCEEEEecCCcCCCHHHHHHHHHHHHHhc-CCceEEEeecCcccc-cccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1067 LKKSKVLVLDEATASVDTATDNQIQQTLRQHF-SDCTVVTIAHRITSV-LDSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1067 Lr~~~ILiLDEaTS~LD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti-~~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
+.+|+||||||||++||+.+.+.+.+.|+++. .++|||+|||+++.+ ..||||+||++|+|++.|+++++.++
T Consensus 181 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 181 AMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred HhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999998764 478999999999876 56999999999999999999998864
No 489
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=99.97 E-value=1.3e-31 Score=289.87 Aligned_cols=181 Identities=24% Similarity=0.353 Sum_probs=159.5
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHH----HhhcCeeeccccccccc
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHD----LRTRLSIIPQDPTMFEG 1022 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~----LR~~i~~VpQdp~LF~g 1022 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.+.+... .|++++|+||++.+|.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPD 96 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccCCC
Confidence 35799999999999999999999999999999999999999999999999998877433 46789999999999986
Q ss_pred -cchhccCCCC---CC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1023 -TTRSNLDPLE---EH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1023 -TIr~Nl~~~~---~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
|+++|+.+.. .. .++++.++++..++.+.....|..|..+ ||||+++|+||||||||++||+++.
T Consensus 97 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~ 176 (218)
T cd03255 97 LTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETG 176 (218)
T ss_pred CcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHH
Confidence 9999997521 11 1356889999999988877777777655 8999999999999999999999999
Q ss_pred HHHHHHHHHhcC--CceEEEeecCcccccccCEEEEEeCcEE
Q 037346 1088 NQIQQTLRQHFS--DCTVVTIAHRITSVLDSAMVLLLNHGLI 1127 (1156)
Q Consensus 1088 ~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~D~I~Vl~~G~I 1127 (1156)
+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++
T Consensus 177 ~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 177 KEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999998754 7899999999998889999999999975
No 490
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=99.97 E-value=3.2e-31 Score=290.21 Aligned_cols=190 Identities=22% Similarity=0.376 Sum_probs=168.0
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~ 1026 (1156)
-.++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+. .|+.++|+||+|.+|.+ |+++
T Consensus 14 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~~~q~~~~~~~~t~~e 91 (237)
T TIGR00968 14 QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGFVFQHYALFKHLTVRD 91 (237)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEEEecChhhccCCcHHH
Confidence 37999999999999999999999999999999999999999999999999987653 47889999999999976 9999
Q ss_pred ccCCCC---CC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLE---EH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~---~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.+.. .. .++++.++++..++.+...+.+..+..+ ||||+++|+++||||||++||.++.+.+.+
T Consensus 92 nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~ 171 (237)
T TIGR00968 92 NIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRS 171 (237)
T ss_pred HHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH
Confidence 996432 11 1356789999999988887777666655 899999999999999999999999999999
Q ss_pred HHHHhcC--CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcC
Q 037346 1093 TLRQHFS--DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1093 ~l~~~~~--~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 172 ~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 172 WLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9998654 6899999999998765 999999999999999999999853
No 491
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.3e-31 Score=293.41 Aligned_cols=194 Identities=22% Similarity=0.359 Sum_probs=162.3
Q ss_pred EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccC-----CCceEEEcCeeCCC--CChHHHhhcCeeecccccccc
Q 037346 949 NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVES-----TAGHILIDGKDISL--IGLHDLRTRLSIIPQDPTMFE 1021 (1156)
Q Consensus 949 ~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~~~~LR~~i~~VpQdp~LF~ 1021 (1156)
.|+|++|+..+++.++|.|+||||||||+++|.|+++| ++|+|.+||.++.. .+...+|+.+++|||+|.+|.
T Consensus 34 il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 113 (267)
T PRK14235 34 ALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPFP 113 (267)
T ss_pred EEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCCC
Confidence 45666666667777788899999999999999999975 89999999999975 356678899999999999999
Q ss_pred ccchhccCCCC---C-----C-CHHHHHHHHHHcCCChHH----HhhcCCcccc-------ccccccCCCEEEEecCCcC
Q 037346 1022 GTTRSNLDPLE---E-----H-ADEQIWEALDKCQLGDEV----RKKKGKLDSQ-------GRVLLKKSKVLVLDEATAS 1081 (1156)
Q Consensus 1022 gTIr~Nl~~~~---~-----~-~deei~~al~~~~l~~~i----~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~ 1081 (1156)
+|+++|+.+.. . . .++++.++++.+++.+.+ ...+..|..+ ||||+.+|++|||||||++
T Consensus 114 ~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~ 193 (267)
T PRK14235 114 KSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSA 193 (267)
T ss_pred CcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcC
Confidence 99999996421 1 1 135578999999997543 2334445433 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCC
Q 037346 1082 VDTATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSS 1142 (1156)
Q Consensus 1082 LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g 1142 (1156)
||+.+...+.+.|++..+++|+|+|||+++.+. -||+|++|++|+|++.|++++++.++..
T Consensus 194 LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~ 255 (267)
T PRK14235 194 LDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKMFTNPDD 255 (267)
T ss_pred CCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhCCCC
Confidence 999999999999998877789999999999985 4899999999999999999999865433
No 492
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=99.97 E-value=2e-31 Score=291.41 Aligned_cols=192 Identities=22% Similarity=0.370 Sum_probs=166.7
Q ss_pred eEEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHH-hhcCeeeccccccccc-cc
Q 037346 947 EVNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDL-RTRLSIIPQDPTMFEG-TT 1024 (1156)
Q Consensus 947 ~I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~L-R~~i~~VpQdp~LF~g-TI 1024 (1156)
...++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.++|.++...+...+ |+.++++||++.+|.+ |+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 92 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTV 92 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEecCCccccccCcH
Confidence 347899999999999999999999999999999999999999999999999988876654 5679999999999987 99
Q ss_pred hhccCCCC---CCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHH
Q 037346 1025 RSNLDPLE---EHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQI 1090 (1156)
Q Consensus 1025 r~Nl~~~~---~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I 1090 (1156)
++|+.+.. ... ++++.++++..++.+.....+..|..+ ||||+.+|++|||||||++||+++.+.+
T Consensus 93 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~ 172 (232)
T cd03218 93 EENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDI 172 (232)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHH
Confidence 99996421 111 245678899999987776666666544 8999999999999999999999999999
Q ss_pred HHHHHHhc-CCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhc
Q 037346 1091 QQTLRQHF-SDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLE 1138 (1156)
Q Consensus 1091 ~~~l~~~~-~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~ 1138 (1156)
.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 173 ~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 173 QKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 99998765 4789999999997665 599999999999999999999874
No 493
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=99.97 E-value=1.1e-31 Score=290.45 Aligned_cols=183 Identities=22% Similarity=0.348 Sum_probs=160.9
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCChHHHhhcCeeeccccccccc-cchh
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGLHDLRTRLSIIPQDPTMFEG-TTRS 1026 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~~~LR~~i~~VpQdp~LF~g-TIr~ 1026 (1156)
..++|++|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++.. ....+|++++++||+|.+|.+ |+++
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~e 97 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRLGFVSDSTGLYDRLTARE 97 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhEEEecCCcccCcCCCHHH
Confidence 47999999999999999999999999999999999999999999999999976 456778999999999999985 9999
Q ss_pred ccCCCC---CC----CHHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHHHHHHH
Q 037346 1027 NLDPLE---EH----ADEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATDNQIQQ 1092 (1156)
Q Consensus 1027 Nl~~~~---~~----~deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te~~I~~ 1092 (1156)
|+.+.. .. .++++.++++..++.+.....+..|..+ |||++++|++|||||||++||+.+.+.+.+
T Consensus 98 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~ 177 (218)
T cd03266 98 NLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALRE 177 (218)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHH
Confidence 985321 11 2356888999999988877777666654 899999999999999999999999999999
Q ss_pred HHHHhc-CCceEEEeecCcccccc-cCEEEEEeCcEEeeec
Q 037346 1093 TLRQHF-SDCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYD 1131 (1156)
Q Consensus 1093 ~l~~~~-~~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G 1131 (1156)
.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 178 ~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 178 FIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 998874 47899999999998764 9999999999999865
No 494
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.2e-31 Score=299.56 Aligned_cols=192 Identities=23% Similarity=0.347 Sum_probs=165.7
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCC----CChHHHhhcCeeecccc--cccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISL----IGLHDLRTRLSIIPQDP--TMFE 1021 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~~~~LR~~i~~VpQdp--~LF~ 1021 (1156)
..++||+|...+++.++|.|+||||||||+++|.|+++|++|+|.+||+++.. .+....|++++||||+| .+|+
T Consensus 21 ~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~ 100 (290)
T PRK13634 21 RALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLFE 100 (290)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhhh
Confidence 47899999999999999999999999999999999999999999999999863 34667888999999998 6888
Q ss_pred ccchhccCCCC---CCC----HHHHHHHHHHcCCC-hHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCCHHH
Q 037346 1022 GTTRSNLDPLE---EHA----DEQIWEALDKCQLG-DEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTAT 1086 (1156)
Q Consensus 1022 gTIr~Nl~~~~---~~~----deei~~al~~~~l~-~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~t 1086 (1156)
.|+++|+.+.. ..+ .+.+.++++.++|. +.....|..|..+ ||||+.+|+||||||||++||+.+
T Consensus 101 ~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~ 180 (290)
T PRK13634 101 ETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKG 180 (290)
T ss_pred hhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHH
Confidence 99999996431 122 23577899999997 4445556666544 899999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcC
Q 037346 1087 DNQIQQTLRQHFS--DCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLEN 1139 (1156)
Q Consensus 1087 e~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~ 1139 (1156)
...+.+.|+++.+ +.|||+|||+++.+. .||||++|++|+|++.|+++++.++
T Consensus 181 ~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 236 (290)
T PRK13634 181 RKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFAD 236 (290)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999988753 789999999999875 5999999999999999999998754
No 495
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=5.4e-31 Score=293.53 Aligned_cols=193 Identities=23% Similarity=0.399 Sum_probs=160.3
Q ss_pred EEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhccc-----CCCceEEEcCeeCCC--CChHHHhhcCeeecccccccc
Q 037346 949 NIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVE-----STAGHILIDGKDISL--IGLHDLRTRLSIIPQDPTMFE 1021 (1156)
Q Consensus 949 ~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~~~~LR~~i~~VpQdp~LF~ 1021 (1156)
.++|++|...+++.++|.|+||||||||+++|+|+++ |++|+|.+||.++.. .+...+|++++||||++.+|.
T Consensus 28 il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~ 107 (269)
T PRK14259 28 AVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNPFP 107 (269)
T ss_pred EEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCccch
Confidence 4555666656777778889999999999999999987 689999999999863 566788999999999999999
Q ss_pred ccchhccCCCCC---C---CHHHHHHHHHHcCCChH----HHhhcCCcccc-------ccccccCCCEEEEecCCcCCCH
Q 037346 1022 GTTRSNLDPLEE---H---ADEQIWEALDKCQLGDE----VRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDT 1084 (1156)
Q Consensus 1022 gTIr~Nl~~~~~---~---~deei~~al~~~~l~~~----i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~ 1084 (1156)
.|+++|+.+... . .++++.++++.+++.+. ....+..|..+ ||||+++|++|||||||++||+
T Consensus 108 ~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~ 187 (269)
T PRK14259 108 KSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDP 187 (269)
T ss_pred hhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCH
Confidence 999999975321 1 14567888999987543 33333444433 8999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEeC-----------cEEeeecChhHHhcCCC
Q 037346 1085 ATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNH-----------GLIKEYDSPTKLLENKS 1141 (1156)
Q Consensus 1085 ~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~-----------G~IvE~G~~~eLl~~~~ 1141 (1156)
.+...+.+.|++..+++|+|+|||+++.+. -||+|++|++ |+++|.|++++++.++.
T Consensus 188 ~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 188 ISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLVEFNETKKIFNSPK 256 (269)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEEEeCCHHHHHhCcC
Confidence 999999999998877889999999998875 5999999996 67999999999987544
No 496
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=99.97 E-value=4.5e-31 Score=349.82 Aligned_cols=202 Identities=20% Similarity=0.340 Sum_probs=170.9
Q ss_pred cEEEeeeEEEeCCC-CCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCC---CCCcEEEEcCe---------E
Q 037346 357 AIEIIDGSFSWDFS-SPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVP---KESGIIRLCGT---------K 423 (1156)
Q Consensus 357 ~i~~~~~~f~~~~~-~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~---~~~G~i~~~g~---------~ 423 (1156)
.++++|+++.|+.. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ |++|+|.+||+ +
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~~~~~~i 838 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDSSFQRSI 838 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECChhhhcce
Confidence 47899999999632 24579999999999999999999999999999999999997 68899999984 5
Q ss_pred EEEecCCc-CCCccHHHHhhcCC------CCCH----HHHHHHHHHhCCchhhhhCCCCCccccccCCCCCCHHHHHHHH
Q 037346 424 AYVAQSPW-IQSGKIEENILFGK------EMDR----ERYERVLEACSLKKDLEVLPFGDQTIIGERGINLSGGQKQRIQ 492 (1156)
Q Consensus 424 ~~v~Q~~~-~~~~ti~eni~~~~------~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LSgGqkqRi~ 492 (1156)
+||+|++. ++..||+||+.|+. ..++ ++.+++++.++|.+ ..++.+|+.+.+||||||||++
T Consensus 839 ~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~ 911 (1394)
T TIGR00956 839 GYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLT 911 (1394)
T ss_pred eeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHH
Confidence 99999975 45679999999752 1222 34566777777643 2467788888899999999999
Q ss_pred HHHhhccCCC-eeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCcc--ccCCEEEEEeCC-eEEEccChHH
Q 037346 493 IARPLYQDAD-IFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFL--PAADLILVIKDG-KITQAGKYSD 565 (1156)
Q Consensus 493 lAral~~~~~-illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~--~~~d~i~~l~~G-~i~~~g~~~~ 565 (1156)
|||||+.+|+ |++||||||+||+.++..+.+.+.+ .+|+|||+++|+++.. ..+|++++|++| ++++.|+..+
T Consensus 912 Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 912 IGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 9999999997 9999999999999999998876644 4689999999999863 579999999987 9999998743
No 497
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=99.97 E-value=4.2e-31 Score=292.16 Aligned_cols=202 Identities=21% Similarity=0.332 Sum_probs=170.5
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCC--------hHHHhhcCeeecccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIG--------LHDLRTRLSIIPQDPTM 1019 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------~~~LR~~i~~VpQdp~L 1019 (1156)
..++||+|...+++.++|.|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+++++|||++.+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 96 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNL 96 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHHhhhhEEEEecCccc
Confidence 4789999999999999999999999999999999999999999999999987542 35678899999999998
Q ss_pred cc-ccchhccCCC----CCCC----HHHHHHHHHHcCCChHHHhhcCCcccc-------ccccccCCCEEEEecCCcCCC
Q 037346 1020 FE-GTTRSNLDPL----EEHA----DEQIWEALDKCQLGDEVRKKKGKLDSQ-------GRVLLKKSKVLVLDEATASVD 1083 (1156)
Q Consensus 1020 F~-gTIr~Nl~~~----~~~~----deei~~al~~~~l~~~i~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD 1083 (1156)
|. .|+++|+.+. .... ++.+.++++..++.+.....+..|..+ ||||+.+|+||||||||++||
T Consensus 97 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD 176 (250)
T PRK11264 97 FPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALD 176 (250)
T ss_pred CCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 86 6999999642 1112 245778899999987766666666544 899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC-CceEEEeecCcccccc-cCEEEEEeCcEEeeecChhHHhcCCC-ChHHHHHH
Q 037346 1084 TATDNQIQQTLRQHFS-DCTVVTIAHRITSVLD-SAMVLLLNHGLIKEYDSPTKLLENKS-SSFAQLVA 1149 (1156)
Q Consensus 1084 ~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~D~I~Vl~~G~IvE~G~~~eLl~~~~-g~f~~l~~ 1149 (1156)
+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+. ...+.++.
T Consensus 177 ~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~~ 245 (250)
T PRK11264 177 PELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFADPQQPRTRQFLE 245 (250)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCCCCHHHHHHHH
Confidence 9999999999988753 7899999999999865 99999999999999999999986543 23344443
No 498
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=99.97 E-value=3.9e-31 Score=276.89 Aligned_cols=182 Identities=25% Similarity=0.384 Sum_probs=159.2
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhcccCCCceEEEcCeeCCCCCh---HHH-hhcCeeeccccccccc-
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRIVESTAGHILIDGKDISLIGL---HDL-RTRLSIIPQDPTMFEG- 1022 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~~---~~L-R~~i~~VpQdp~LF~g- 1022 (1156)
-.+++|+|...+++-++|.||||||||||+++|.++-.|++|.|.++|.|+..++- ..+ |++||+|+|+..|++.
T Consensus 19 ~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl~~l 98 (226)
T COG1136 19 EALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLLPDL 98 (226)
T ss_pred EecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCCCCC
Confidence 47899999999999999999999999999999999999999999999999999984 334 4569999999998865
Q ss_pred cchhccCC----CCCC---CHHHHHHHHHHcCCChHHH-hhcCCcccc-------ccccccCCCEEEEecCCcCCCHHHH
Q 037346 1023 TTRSNLDP----LEEH---ADEQIWEALDKCQLGDEVR-KKKGKLDSQ-------GRVLLKKSKVLVLDEATASVDTATD 1087 (1156)
Q Consensus 1023 TIr~Nl~~----~~~~---~deei~~al~~~~l~~~i~-~lp~gl~s~-------ARALLr~~~ILiLDEaTS~LD~~te 1087 (1156)
|++||+.. .... ..+.+.+.++.+|+.+... ..|..|.-+ ||||+.+|+||+.||||+|||.+|.
T Consensus 99 tv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~ 178 (226)
T COG1136 99 TVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTA 178 (226)
T ss_pred CHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHH
Confidence 99999973 2221 2456788899999997777 667766644 8999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCceEEEeecCcccccccCEEEEEeCcEEee
Q 037346 1088 NQIQQTLRQHF--SDCTVVTIAHRITSVLDSAMVLLLNHGLIKE 1129 (1156)
Q Consensus 1088 ~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~D~I~Vl~~G~IvE 1129 (1156)
+.|.+.+++.. .++|+|+|||+......|||++.|.+|++.+
T Consensus 179 ~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 179 KEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999874 3789999999999999999999999999544
No 499
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.7e-31 Score=321.89 Aligned_cols=194 Identities=23% Similarity=0.333 Sum_probs=155.3
Q ss_pred ccEEEeeeEEEeCCCCCCCccccceEEeeCCeEEEEEcCCCCChHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 037346 356 TAIEIIDGSFSWDFSSPNPTLRNINLKVFHGMRVAVCGTVGSGKSSCLSCILGGVPKESGIIRLCGT------------- 422 (1156)
Q Consensus 356 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKSTll~~i~g~~~~~~G~i~~~g~------------- 422 (1156)
..|+++|+++.+ +++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.
T Consensus 249 ~~i~~~~l~~~~-----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 323 (491)
T PRK10982 249 VILEVRNLTSLR-----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINH 323 (491)
T ss_pred cEEEEeCccccc-----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHC
Confidence 369999999874 25899999999999999999999999999999999999999999999872
Q ss_pred -EEEEecCCc---CC-CccHHHH-----hhcCCC----CC----HHHHHHHHHHhCCchhhhhCCCCCccccccCCCCCC
Q 037346 423 -KAYVAQSPW---IQ-SGKIEEN-----ILFGKE----MD----RERYERVLEACSLKKDLEVLPFGDQTIIGERGINLS 484 (1156)
Q Consensus 423 -~~~v~Q~~~---~~-~~ti~en-----i~~~~~----~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~v~~~g~~LS 484 (1156)
++|++|++. ++ +.|+.+| +.+... .+ +++.++.++..++..+ .......+||
T Consensus 324 ~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS 393 (491)
T PRK10982 324 GFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTP----------GHRTQIGSLS 393 (491)
T ss_pred CCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCC----------CcccccccCC
Confidence 689999863 34 3577666 322111 11 1223444444444211 1245567899
Q ss_pred HHHHHHHHHHHhhccCCCeeeeeCCCCCcCHHHHHHHHHHHHh--cCCCEEEEEccCCCccc-cCCEEEEEeCCeEEEcc
Q 037346 485 GGQKQRIQIARPLYQDADIFLLDDPFSPVDDHTGAHLFKFCWV--SSSKTVIYATHQVEFLP-AADLILVIKDGKITQAG 561 (1156)
Q Consensus 485 gGqkqRi~lAral~~~~~illlDep~s~lD~~~~~~i~~~~~~--~~~~tvi~vtH~~~~~~-~~d~i~~l~~G~i~~~g 561 (1156)
||||||++||||++.+|+||||||||++||+.+++.+++.+.. .+|+|+|++||+++.+. .||++++|++|+++..+
T Consensus 394 gGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~ 473 (491)
T PRK10982 394 GGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIV 473 (491)
T ss_pred cHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEE
Confidence 9999999999999999999999999999999999999876533 46899999999999885 59999999999999776
Q ss_pred ChH
Q 037346 562 KYS 564 (1156)
Q Consensus 562 ~~~ 564 (1156)
+.+
T Consensus 474 ~~~ 476 (491)
T PRK10982 474 DTK 476 (491)
T ss_pred ccc
Confidence 553
No 500
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=3.7e-31 Score=292.40 Aligned_cols=195 Identities=22% Similarity=0.366 Sum_probs=165.4
Q ss_pred EEEEEEEEEEcCCCCceeeCCCCCCHHHHHHHHhhc---ccC--CCceEEEcCeeCCCC--ChHHHhhcCeeeccccccc
Q 037346 948 VNIRHLQVRYAPNLPLVLRGRTGSGKSTLIQTLFRI---VES--TAGHILIDGKDISLI--GLHDLRTRLSIIPQDPTMF 1020 (1156)
Q Consensus 948 I~~~~Vsf~Y~~~~~~vL~G~SGsGKSTL~~lL~rl---~~p--~~G~I~idG~di~~i--~~~~LR~~i~~VpQdp~LF 1020 (1156)
-.++||+|...+++.++|.|+||||||||+++|.|+ ++| ++|+|.+||.++... +...+|+.++||||++.+|
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (250)
T PRK14245 17 HALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNPF 96 (250)
T ss_pred eEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCccC
Confidence 378999999999998999999999999999999997 344 589999999999764 3467888999999999999
Q ss_pred cccchhccCCCC---C-----CCHHHHHHHHHHcCCChHH----HhhcCCcccc-------ccccccCCCEEEEecCCcC
Q 037346 1021 EGTTRSNLDPLE---E-----HADEQIWEALDKCQLGDEV----RKKKGKLDSQ-------GRVLLKKSKVLVLDEATAS 1081 (1156)
Q Consensus 1021 ~gTIr~Nl~~~~---~-----~~deei~~al~~~~l~~~i----~~lp~gl~s~-------ARALLr~~~ILiLDEaTS~ 1081 (1156)
..|+++|+.+.. . ..+++++++++.+++.+.+ ...+..|..+ ||||+++|+||||||||++
T Consensus 97 ~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~ 176 (250)
T PRK14245 97 PKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASA 176 (250)
T ss_pred cccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 999999996421 1 1234678899999986543 3334444433 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEeecCccccc-ccCEEEEEeCcEEeeecChhHHhcCCCC
Q 037346 1082 VDTATDNQIQQTLRQHFSDCTVVTIAHRITSVL-DSAMVLLLNHGLIKEYDSPTKLLENKSS 1142 (1156)
Q Consensus 1082 LD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~D~I~Vl~~G~IvE~G~~~eLl~~~~g 1142 (1156)
||+.+.+.+.+.|++..+++|||+|||+++.+. .||+|++|++|++++.|+++++++++..
T Consensus 177 LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~~~~~ 238 (250)
T PRK14245 177 LDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFTNPEK 238 (250)
T ss_pred CCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhcCCCC
Confidence 999999999999999877899999999999885 5999999999999999999999876543
Done!