BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037348
(579 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255548670|ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus communis]
gi|223545335|gb|EEF46840.1| chlorophyll a oxygenase, putative [Ricinus communis]
Length = 552
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/527 (79%), Positives = 457/527 (86%), Gaps = 10/527 (1%)
Query: 57 TPPTTGNVISPIKAHKLRKRTEPKLTKCHA----VTDMSSSAVPTPDDHKVLVGPASEEE 112
TP +++ PI H L+ R TKC+A V D S S V DDH VLVGP+SEEE
Sbjct: 32 TPTIKTHLLKPI-LHTLKIRH----TKCYAASSTVHDESRSGVVEADDHMVLVGPSSEEE 86
Query: 113 SRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHR 172
RGER VADYDWTEEWYPLYLTKDVPDDAPLGLTVFD+QIVLYKDG+GELRC++DRCPHR
Sbjct: 87 RRGERVVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDKQIVLYKDGEGELRCYEDRCPHR 146
Query: 173 LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP +AKIP+SACV+TYE++ESQGVVW
Sbjct: 147 LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPTNAKIPQSACVKTYEIRESQGVVW 206
Query: 233 VWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDY 292
VWMS+KTPPN +KLPWFENFARPGFQD ST HELPYDHSILLENLMDPAHIPISHDRTD+
Sbjct: 207 VWMSRKTPPNLNKLPWFENFARPGFQDTSTTHELPYDHSILLENLMDPAHIPISHDRTDW 266
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEK 352
SAKREDAQ L F+VTERTDRGFAG WGR+KD ++ NFLRFEAPCVLQNNR+ VD + G K
Sbjct: 267 SAKREDAQALRFKVTERTDRGFAGWWGRDKDPALLNFLRFEAPCVLQNNRDIVD-ENGVK 325
Query: 353 HYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNE 412
HY TGLFLCRPTGQGK+MLIVRFG T S K P WYFHQ+ASKVFEQDMGFLSSQNE
Sbjct: 326 HYFTGLFLCRPTGQGKAMLIVRFGGTKRSHIAKWIPQWYFHQNASKVFEQDMGFLSSQNE 385
Query: 413 VLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPA 472
VL+KEKVPTK LY NL+S DTWVAEYRKWMDK GHGMPY+FGHSTISLP+VPAVVEHAPA
Sbjct: 386 VLMKEKVPTKNLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPEVPAVVEHAPA 445
Query: 473 GLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLT 532
GLVAGVSAS PAKGGIGTMHAPNL+NRYFRHVIHC+ C S VK F WKN+LS A + T
Sbjct: 446 GLVAGVSASSPAKGGIGTMHAPNLSNRYFRHVIHCRKCSSVVKGFEAWKNALSAIALVST 505
Query: 533 ALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
ALAIL +GRQW+ F L+SA LCLAGVYAC+TAI+MNTTNFIRTHRRL
Sbjct: 506 ALAILASGRQWKPFLLLSAGLCLAGVYACTTAIAMNTTNFIRTHRRL 552
>gi|75219721|sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske
iron-sulfur protein TIC55; AltName: Full=Translocon at
the inner envelope membrane of chloroplasts 55;
Short=PsTIC55; Flags: Precursor
gi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein Tic55 [Pisum sativum]
Length = 553
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/481 (82%), Positives = 434/481 (90%), Gaps = 1/481 (0%)
Query: 99 DDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG 158
+D KVLVGP+SE+E +GER VADYDWTEEWYPLYLTK+VP DAPLGL V+D+ IVL++DG
Sbjct: 74 EDQKVLVGPSSEQERKGEREVADYDWTEEWYPLYLTKNVPHDAPLGLKVYDKNIVLFRDG 133
Query: 159 KGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC 218
+ +C++DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP+SAC
Sbjct: 134 NDQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPKSAC 193
Query: 219 VRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLM 278
V+TYEV++SQGV+WVWMS+KTPPN K+PWFENFARPGFQD+ST HELPYDHSILLENLM
Sbjct: 194 VKTYEVRDSQGVLWVWMSRKTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILLENLM 253
Query: 279 DPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVL 338
DPAH+PISHDRTD+SAKREDAQ LGFEVTERTDRGFAG WGREKDGS PNFLRFEAPCVL
Sbjct: 254 DPAHVPISHDRTDWSAKREDAQALGFEVTERTDRGFAGWWGREKDGSKPNFLRFEAPCVL 313
Query: 339 QNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASK 398
QNNRE VD K GE ++ +GLFLCRPTGQGKSMLIVRFG T SP IKLFP+WYFHQ+ASK
Sbjct: 314 QNNREIVD-KNGEINHFSGLFLCRPTGQGKSMLIVRFGATKRSPLIKLFPEWYFHQNASK 372
Query: 399 VFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTI 458
VFEQDMGFLSSQNE+LLKEKVPTKELY NL+S DTWVAEYRKWMDK GHGMPY+FGHSTI
Sbjct: 373 VFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTI 432
Query: 459 SLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFN 518
SLP+ PAVVEHAPAGLVAG+SAS PAKGGIGTMHAPNLANRYFRHVIHCKGC SA+KAF
Sbjct: 433 SLPEEPAVVEHAPAGLVAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCSSAIKAFQ 492
Query: 519 TWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRR 578
WKN LS L ALAIL +GRQW+ L SASLC GVYACSTAI+MNTTNFIR HRR
Sbjct: 493 IWKNVLSGVVVALAALAILVSGRQWKVLLLASASLCSVGVYACSTAIAMNTTNFIRVHRR 552
Query: 579 L 579
L
Sbjct: 553 L 553
>gi|356507174|ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 532
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/500 (80%), Positives = 439/500 (87%), Gaps = 13/500 (2%)
Query: 80 KLTKCHAVTDMSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPD 139
K +C A D+ + DH VLVGP SEEE +G DYDWT+EWYPLYLT++VP+
Sbjct: 46 KQLRCGATADIKA-------DHAVLVGPTSEEERKG-----DYDWTQEWYPLYLTQNVPE 93
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
DAPLGL VFD+Q+VL+KDG G+ RC++DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG
Sbjct: 94 DAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 153
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 259
KCVKIPQLPADAKIPR+ACV+TYEV++SQGV+WVWMS KTPPN KLPWFENFARPGFQD
Sbjct: 154 KCVKIPQLPADAKIPRAACVKTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPGFQD 213
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWG 319
VSTIHELPYDHSILLENLMDPAHIPISHDRTD++AKREDAQPL FEVTERTDRGFAG WG
Sbjct: 214 VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWG 273
Query: 320 REKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTG 379
REKDGSMPNFLRFEAPCVLQNNRE VD K GE +Y +GLFLCRPTGQGKSMLIVRFG T
Sbjct: 274 REKDGSMPNFLRFEAPCVLQNNREIVD-KNGEINYFSGLFLCRPTGQGKSMLIVRFGGTK 332
Query: 380 TSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYR 439
SP K+FP WYFHQ+ASKVFEQDMGFLSSQNE+LL+EKVPTKELY NL+S DTWVAEYR
Sbjct: 333 RSPLAKVFPKWYFHQNASKVFEQDMGFLSSQNEILLREKVPTKELYLNLKSSDTWVAEYR 392
Query: 440 KWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANR 499
KWMDKAGHGMPY+FGHSTISLPK PAVVEHAPAGLVAG SAS P KGGIGTMHAPN ANR
Sbjct: 393 KWMDKAGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANR 452
Query: 500 YFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVY 559
YFRHVIHCKGCR+ VKAF WKN+LS A LTALAIL +GRQW+ L SA+LC GVY
Sbjct: 453 YFRHVIHCKGCRTVVKAFEAWKNALSAVAIALTALAILLSGRQWKVLLLASAALCSVGVY 512
Query: 560 ACSTAISMNTTNFIRTHRRL 579
ACSTAI+MNTTNFIRTHRRL
Sbjct: 513 ACSTAIAMNTTNFIRTHRRL 532
>gi|224143358|ref|XP_002324928.1| predicted protein [Populus trichocarpa]
gi|222866362|gb|EEF03493.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/535 (76%), Positives = 453/535 (84%), Gaps = 9/535 (1%)
Query: 53 SPF--FTPPTTGNVISPIKAHKLRK-RTEPK-LTKCHAVTDMSSSAVPT----PDDHKVL 104
+PF FTP T I +H L+ ++P + KCHAV D ++ P+ D H VL
Sbjct: 16 NPFASFTPTTKLPTTIHINSHLLKSIHSKPYYIKKCHAVADAPTAIPPSLDAEDDAHGVL 75
Query: 105 VGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRC 164
+GP+SEEE RG+ V DY+WTEEWYPLYLTKDVPDDAPLGL VFD+Q+VLYKDG+GELRC
Sbjct: 76 IGPSSEEERRGDGAVVDYNWTEEWYPLYLTKDVPDDAPLGLNVFDKQLVLYKDGQGELRC 135
Query: 165 HQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEV 224
H+DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPA+AKIP+SACV+TYEV
Sbjct: 136 HEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPANAKIPQSACVKTYEV 195
Query: 225 KESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 284
KESQGVVWVWMS KTPPN K+PWFENFARPGFQD STIHELPYDHSILLENLMDPAHIP
Sbjct: 196 KESQGVVWVWMSLKTPPNFKKVPWFENFARPGFQDTSTIHELPYDHSILLENLMDPAHIP 255
Query: 285 ISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRES 344
ISHDRTD+++KREDAQ L FEVTERT RGFAG+WG+EKD + +FLRF+APCVL N+ E
Sbjct: 256 ISHDRTDWTSKREDAQALRFEVTERTHRGFAGRWGKEKDQKLRSFLRFQAPCVLSNDIEF 315
Query: 345 VDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDM 404
D K G Y TGLFLCRPTGQGKSM+IVRFG T K+ P WYFHQ+A K+FEQDM
Sbjct: 316 ADEK-GVTQYFTGLFLCRPTGQGKSMIIVRFGATKRPQMAKVIPKWYFHQNACKIFEQDM 374
Query: 405 GFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVP 464
GFLSSQNEVL+KEKVPTKELY NL+S DTWVAEYRKWMDK GHGMPYYFGH+TISLP+VP
Sbjct: 375 GFLSSQNEVLMKEKVPTKELYINLKSSDTWVAEYRKWMDKVGHGMPYYFGHNTISLPEVP 434
Query: 465 AVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL 524
AVVEHAPAGLVAGVSAS PAKGGIGTMHAPN+ NRYFRHVIHCKGC S VK F WKN+L
Sbjct: 435 AVVEHAPAGLVAGVSASSPAKGGIGTMHAPNVNNRYFRHVIHCKGCTSVVKNFQAWKNAL 494
Query: 525 STAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
S + LTALAIL +GRQW+ F LVSASLCLAGVYACSTAI+MNTTNFIRTHRRL
Sbjct: 495 SAISVALTALAILASGRQWKTFLLVSASLCLAGVYACSTAIAMNTTNFIRTHRRL 549
>gi|359475902|ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-like [Vitis vinifera]
gi|296082166|emb|CBI21171.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/509 (78%), Positives = 444/509 (87%), Gaps = 1/509 (0%)
Query: 71 HKLRKRTEPKLTKCHAVTDMSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYP 130
HKL +T +C A+ ++ +D VLV P+S+EE RGER VA+YDW EEWYP
Sbjct: 37 HKLLTQTWRDSIRCCAIAEIRDGVSLGGEDQGVLVDPSSQEEVRGERHVAEYDWKEEWYP 96
Query: 131 LYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLY 190
LYLTKD+P+DAP+GLTVFD+Q+VLY+DGK L+C++DRCPHRLAKLSEGQL+DGRLECLY
Sbjct: 97 LYLTKDIPEDAPMGLTVFDKQLVLYRDGKDLLQCYEDRCPHRLAKLSEGQLVDGRLECLY 156
Query: 191 HGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFE 250
HGWQFEGEGKCVKIPQLPADAKIPRSACV+TYEVK+SQGVVWVWMS +TPPNPDKLPWFE
Sbjct: 157 HGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVKDSQGVVWVWMSHRTPPNPDKLPWFE 216
Query: 251 NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERT 310
NFARPGF+D STIHELPYDHSILLENLMDPAH+PISHDRTD+SAKREDAQPL F+VTERT
Sbjct: 217 NFARPGFRDTSTIHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQPLCFKVTERT 276
Query: 311 DRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSM 370
DRGFAG WGREKD S+ NFLRFEAPCVLQNNRE VD K GEKHY TGLFLCRP+GQGKSM
Sbjct: 277 DRGFAGWWGREKDESLLNFLRFEAPCVLQNNREIVD-KNGEKHYFTGLFLCRPSGQGKSM 335
Query: 371 LIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRS 430
LIVRFG+T SP KLFP+WYFHQ+A KVFEQDMGFLSSQNE+L+KEKVPTKELY NLRS
Sbjct: 336 LIVRFGSTKRSPIAKLFPEWYFHQNAGKVFEQDMGFLSSQNEILMKEKVPTKELYLNLRS 395
Query: 431 IDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGT 490
DTWVAEYR+WMDK GHGMPY+FGHSTISLP+ PAVVEHAPAGLVAG+SAS PAKGGIGT
Sbjct: 396 SDTWVAEYRRWMDKVGHGMPYHFGHSTISLPQQPAVVEHAPAGLVAGLSASSPAKGGIGT 455
Query: 491 MHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVS 550
MHAPN ANRYFRHV+HCKGCRS VKAF WKN T A TALAIL GRQW+A LV
Sbjct: 456 MHAPNPANRYFRHVVHCKGCRSVVKAFQAWKNVFFTLALASTALAILVTGRQWKALLLVG 515
Query: 551 ASLCLAGVYACSTAISMNTTNFIRTHRRL 579
+L LAG+YACST ++MNTTNF+R HRRL
Sbjct: 516 TALSLAGMYACSTVVAMNTTNFVRIHRRL 544
>gi|357465983|ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
Length = 552
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/537 (75%), Positives = 453/537 (84%), Gaps = 1/537 (0%)
Query: 43 LKIPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMSSSAVPTPDDHK 102
L + P K +T P++ + K +R A +S+ + +D K
Sbjct: 17 LPVSPPPSKQILLWTSPSSSFSFNLNKGLSSSRRKHAGYLPATADVKTASTLLDVEEDQK 76
Query: 103 VLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL 162
VLVGP+SE+E RGER +A YDW EEWYPLYLTK+VPDDAPLGLTVFD+ +VL+KDG +
Sbjct: 77 VLVGPSSEQERRGERELAAYDWKEEWYPLYLTKNVPDDAPLGLTVFDKNLVLFKDGNDQF 136
Query: 163 RCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTY 222
+C++DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACV+TY
Sbjct: 137 QCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTY 196
Query: 223 EVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
EV++SQGV+WVWMS K PPN K+PWFENFARPGFQDVST HELPYDHSILLENLMDPAH
Sbjct: 197 EVRDSQGVIWVWMSPKVPPNVSKIPWFENFARPGFQDVSTTHELPYDHSILLENLMDPAH 256
Query: 283 IPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNR 342
IPISHDRTD++AKREDAQPL FEVTERTDRGFAG WGREKDG+ PNFLRFEAPCVLQNNR
Sbjct: 257 IPISHDRTDWTAKREDAQPLLFEVTERTDRGFAGWWGREKDGTKPNFLRFEAPCVLQNNR 316
Query: 343 ESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQ 402
E VD K GE +Y +GLFLCRPTGQGKSMLIVRFG T SP +KLFP WYFHQ+ASKVFEQ
Sbjct: 317 EIVD-KNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPIVKLFPQWYFHQNASKVFEQ 375
Query: 403 DMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPK 462
DMGFLSSQNE+LLKEKVPTKELY NL+S DTWVAEYRKWMDK GHGMPY+FGH+TISLPK
Sbjct: 376 DMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHNTISLPK 435
Query: 463 VPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKN 522
PAV+EHAPAGL+AG+SAS PAKGGIGTMHAPNLANRYFRHVIHCKGCR+AVKAF TWKN
Sbjct: 436 EPAVIEHAPAGLIAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCRTAVKAFQTWKN 495
Query: 523 SLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
+LS L ALAIL GRQW+A L SA+LC GVYACSTA+++NTTNFIRTHRRL
Sbjct: 496 ALSAVVVALAALAILVTGRQWKAILLASAALCSVGVYACSTAVALNTTNFIRTHRRL 552
>gi|224092649|ref|XP_002309693.1| predicted protein [Populus trichocarpa]
gi|222855669|gb|EEE93216.1| predicted protein [Populus trichocarpa]
Length = 556
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/559 (73%), Positives = 452/559 (80%), Gaps = 24/559 (4%)
Query: 40 SPLLKIP--------SPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMS 91
SP+LK P S L P P PI K+ + KCHAVTD++
Sbjct: 3 SPILKFPFLSHTTSLSKPLAFYPLSLTPKPRKTSRPIHV----KQQQQGSIKCHAVTDLT 58
Query: 92 S-SAVPTP----------DDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDD 140
S + VP+ DDH VLVGP+SEEE RGER VADYDWTEEWYPLYLTKDVPDD
Sbjct: 59 SGNTVPSSIEDQSKGEDNDDHLVLVGPSSEEERRGEREVADYDWTEEWYPLYLTKDVPDD 118
Query: 141 APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 200
APLGLTVFD+Q+VLYKDG+GELRC +DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG
Sbjct: 119 APLGLTVFDKQVVLYKDGQGELRCFEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGN 178
Query: 201 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV 260
CVKIPQLPA+AKIP+SACV+TYEV+ESQGVVWVWMS K+ PN +KLPWFENFARPGF+D
Sbjct: 179 CVKIPQLPANAKIPQSACVKTYEVRESQGVVWVWMSSKSQPNINKLPWFENFARPGFKDS 238
Query: 261 STIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGR 320
S +HELPYDHSILLENLMDPAHIPISHDRTD SAKRE+AQPL FEVTERTDRGFAG WG
Sbjct: 239 SAVHELPYDHSILLENLMDPAHIPISHDRTDLSAKRENAQPLRFEVTERTDRGFAGWWGG 298
Query: 321 EKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGT 380
++PNFLRFEAPCVL NNRE +D K G K Y +GLFLCRPTGQGKSMLIVRFG T
Sbjct: 299 GDAQTLPNFLRFEAPCVLSNNREFIDEK-GVKQYFSGLFLCRPTGQGKSMLIVRFGGTAM 357
Query: 381 SPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRK 440
P+W+FHQ VFEQDMGFLSSQNEVL+KEKVPTK+LY NLRS DTWVAEYRK
Sbjct: 358 PQIANWIPEWFFHQRGCTVFEQDMGFLSSQNEVLMKEKVPTKKLYLNLRSSDTWVAEYRK 417
Query: 441 WMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRY 500
WMDK GHGMPY+FGH+TISLP++PAVVEHAPAGLVAGVSAS PAKGG GTMHAPNLANRY
Sbjct: 418 WMDKTGHGMPYHFGHNTISLPELPAVVEHAPAGLVAGVSASFPAKGGTGTMHAPNLANRY 477
Query: 501 FRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYA 560
FRHVIHCKGC A+KAFNTWK +LS + LTALAIL +GRQW+A LVS SLCLAGVYA
Sbjct: 478 FRHVIHCKGCSGALKAFNTWKKALSAISLALTALAILVSGRQWKAALLVSTSLCLAGVYA 537
Query: 561 CSTAISMNTTNFIRTHRRL 579
CST I M+TTNFIRTHRR
Sbjct: 538 CSTLIQMSTTNFIRTHRRF 556
>gi|356514868|ref|XP_003526124.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 540
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/544 (75%), Positives = 447/544 (82%), Gaps = 25/544 (4%)
Query: 53 SPFFTPPTTG---NVISPIKAHKLR-----------KRTEPKLTKCHAVTDMSSSAVPTP 98
+PF +PP T V +P LR K C A D+ A P
Sbjct: 5 NPFLSPPRTPLSLRVSAPPNQALLRWTLCSQYSFKPSSLRSKHAMCGATADIK--AAPLA 62
Query: 99 D---DHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY 155
D DH VLVGPASE+E +G DYDWT+EWYPLYLT +VP+DAPLGL VFD+Q+VL+
Sbjct: 63 DGEADHAVLVGPASEDERKG-----DYDWTQEWYPLYLTLNVPEDAPLGLRVFDKQLVLF 117
Query: 156 KDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPR 215
KDG G+ RC++DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP+
Sbjct: 118 KDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPQ 177
Query: 216 SACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLE 275
+ACV+TYEV++SQGV+WVWMS KTPPN KLPWFENFARP FQD+STIHELPYDHSILLE
Sbjct: 178 AACVKTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPEFQDISTIHELPYDHSILLE 237
Query: 276 NLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAP 335
NLMDPAHIPISHDRTD++AKREDAQPL FEVTERT RGFAG WGREKDGSMPNFLRFEAP
Sbjct: 238 NLMDPAHIPISHDRTDWTAKREDAQPLCFEVTERTHRGFAGWWGREKDGSMPNFLRFEAP 297
Query: 336 CVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS 395
CVLQNNRE VD K GE +Y +GLFLCRPTGQGKSMLIVRFG T SP K+FP WY HQ+
Sbjct: 298 CVLQNNREIVD-KNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPLAKVFPKWYLHQN 356
Query: 396 ASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGH 455
ASKVFEQDMGFLSSQNE+LLKEKV TKELY NL+S DTWVAEYRKWMDKAGHGMPY+FGH
Sbjct: 357 ASKVFEQDMGFLSSQNEILLKEKVSTKELYLNLKSSDTWVAEYRKWMDKAGHGMPYHFGH 416
Query: 456 STISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVK 515
STISLPK PAVVEHAPAGLVAG SAS P KGGIGTMHAPN ANRYFRHVIHCKGCR+ VK
Sbjct: 417 STISLPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANRYFRHVIHCKGCRTVVK 476
Query: 516 AFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRT 575
AF WKN+LS A L ALAIL +GRQW+A L SA+LC GVYACS AI+MNTTNFIRT
Sbjct: 477 AFEAWKNALSAVAVALVALAILVSGRQWKALLLASAALCSVGVYACSIAIAMNTTNFIRT 536
Query: 576 HRRL 579
HRRL
Sbjct: 537 HRRL 540
>gi|449455677|ref|XP_004145578.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus]
gi|449485314|ref|XP_004157131.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/532 (69%), Positives = 433/532 (81%), Gaps = 4/532 (0%)
Query: 50 LKPSPFFTPPTTGNVI-SPIKAHKLR-KRTEPKLTKCHAVTDMSSSAVPTPDDHKVLVGP 107
+ P+P T PT +++ SP+ + + T+ + A + A P D+ VL+GP
Sbjct: 13 VSPAPNPTRPTNFHLLHSPLFSSSFKLVATKTRFAVRTAAVAGAQIADPVDDNQVVLLGP 72
Query: 108 ASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQD 167
+ E+ E A+Y+WTEEWYPLYLTKDVP+DAPLGLTVFD+Q+VLY+DG GEL CH+D
Sbjct: 73 TTSEKPDDEA-TAEYNWTEEWYPLYLTKDVPEDAPLGLTVFDKQLVLYRDGAGELHCHED 131
Query: 168 RCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKES 227
RCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP+DAKIPRSAC+RTYEV++S
Sbjct: 132 RCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPSDAKIPRSACLRTYEVRDS 191
Query: 228 QGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
QGVVWVWMS + P +PWFENF RPGF+D S+IHELPYDHSILLENLMDPAHIPISH
Sbjct: 192 QGVVWVWMSLEKPSTLKSIPWFENFDRPGFRDFSSIHELPYDHSILLENLMDPAHIPISH 251
Query: 288 DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDN 347
DRT Y AKREDAQPL FEVTERT+RGFAG+WG KD + NFLRFEAPCVLQNNRE+ N
Sbjct: 252 DRTSYPAKREDAQPLDFEVTERTNRGFAGRWGNAKDQPLSNFLRFEAPCVLQNNRET-PN 310
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFL 407
K G Y TGLFLCRPTGQGKSM+IVRFG+T ++ + LFP W+ HQ+A +VFEQDMGFL
Sbjct: 311 KKGGIDYFTGLFLCRPTGQGKSMVIVRFGSTASTVRLNLFPAWFLHQNACRVFEQDMGFL 370
Query: 408 SSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVV 467
SSQNEVL+KEKVPTKELY NLRS DTWV EYR+WMDK GHGMPYYFGHSTISLPK+PAV+
Sbjct: 371 SSQNEVLMKEKVPTKELYLNLRSSDTWVLEYRRWMDKVGHGMPYYFGHSTISLPKLPAVI 430
Query: 468 EHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTA 527
EHAPAG+VAG +AS PAKGGIGTMHAPNL+NRYFRH+IHC+ C + +K+F TW +LS
Sbjct: 431 EHAPAGIVAGTAASPPAKGGIGTMHAPNLSNRYFRHIIHCRSCSNVIKSFQTWNKALSAI 490
Query: 528 AALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
A L ALAIL GRQW+A L+SA+L G YACS A+++NT NFIRTHRRL
Sbjct: 491 AITLIALAILVNGRQWKALSLLSAALFFGGAYACSAALALNTDNFIRTHRRL 542
>gi|15224625|ref|NP_180055.1| translocon at the inner envelope membrane of chloroplasts 55-II
[Arabidopsis thaliana]
gi|75265982|sp|Q9SK50.1|TIC55_ARATH RecName: Full=Protein TIC 55, chloroplastic; AltName:
Full=Translocon at the inner envelope membrane of
chloroplasts 55; Short=AtTIC55; AltName: Full=Translocon
at the inner envelope membrane of chloroplasts 55-II;
Flags: Precursor
gi|4559369|gb|AAD23030.1| putative Rieske iron-sulfur protein [Arabidopsis thaliana]
gi|330252538|gb|AEC07632.1| translocon at the inner envelope membrane of chloroplasts 55-II
[Arabidopsis thaliana]
Length = 539
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/545 (70%), Positives = 438/545 (80%), Gaps = 15/545 (2%)
Query: 36 SLFFSPLLKIPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMSSSAV 95
SL +P I K+ P+P + I +L +R+ T AV+D +
Sbjct: 9 SLQLTPTSPILFTKVTPTPIIHNHRSTCTIPTKPRLRLLRRSAVAGT---AVSDQTEGG- 64
Query: 96 PTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY 155
VL+ P EEE R E VADYDWTEEWYPLYLTK+VP+DAPLGLTV+D+QIVLY
Sbjct: 65 -----GDVLLNP--EEEKRVE--VADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLY 115
Query: 156 KDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPR 215
KDG+G LRC++DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPA AKIP+
Sbjct: 116 KDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPASAKIPK 175
Query: 216 SACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLE 275
+ACV+TYEVK+SQGVVWVWMS KTPPNP+KLPWFENFARPGF D+ST HELPYDHSILLE
Sbjct: 176 AACVKTYEVKDSQGVVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLE 235
Query: 276 NLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSM-PNFLRFEA 334
NLMDPAH+PISHDRTD++AKREDAQPL FEVTER++RGFAG WGREK+G N LRF+A
Sbjct: 236 NLMDPAHVPISHDRTDFTAKREDAQPLVFEVTERSNRGFAGTWGREKEGGKGSNLLRFDA 295
Query: 335 PCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQ 394
PCVLQNNRE + K G K+Y +GLFLCRPTGQGKSMLIVRFG T SP + + P W++HQ
Sbjct: 296 PCVLQNNRE-FEGKDGVKNYFSGLFLCRPTGQGKSMLIVRFGVTKRSPLVSVLPQWFWHQ 354
Query: 395 SASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFG 454
+A KVFEQDMGFLSSQNEVL+KEKVPTK+LY NL+S DTWVAEYRKWMDK GHGMPY+FG
Sbjct: 355 NACKVFEQDMGFLSSQNEVLMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFG 414
Query: 455 HSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAV 514
H TISLPKVP VVEHAPAGL+A +SAS PAKGGIGTMHAPNLANRYFRH+IHC+ C + +
Sbjct: 415 HRTISLPKVPPVVEHAPAGLIAALSASYPAKGGIGTMHAPNLANRYFRHIIHCRSCSNVI 474
Query: 515 KAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIR 574
K+F WKN LS A LTALAIL RQW+A L SA+LC A Y C AI++NT NFIR
Sbjct: 475 KSFELWKNILSATAVALTALAILVVSRQWKAVLLGSAALCSAAAYTCLRAINLNTNNFIR 534
Query: 575 THRRL 579
THRRL
Sbjct: 535 THRRL 539
>gi|297821841|ref|XP_002878803.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
lyrata]
gi|297324642|gb|EFH55062.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/471 (78%), Positives = 411/471 (87%), Gaps = 4/471 (0%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRC 169
EEE R E VADYDWTEEWYPLYLTK++PDDAPLGLTV+D+QIVLYKDG+G LRC++DRC
Sbjct: 72 EEEKRVE--VADYDWTEEWYPLYLTKNIPDDAPLGLTVYDRQIVLYKDGEGTLRCYEDRC 129
Query: 170 PHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQG 229
PHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPA AKIP++ACV+TYEVK+SQG
Sbjct: 130 PHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQG 189
Query: 230 VVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
VVWVWMS KTPPNP+KLPWFENFARPGF D+ST HELPYDHSILLENLMDPAH+PISHDR
Sbjct: 190 VVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPISHDR 249
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSM-PNFLRFEAPCVLQNNRESVDNK 348
TD++AKREDAQPL FEVTER++RGFAG WGREKDG N LRF+APCVLQNNRE + K
Sbjct: 250 TDFTAKREDAQPLVFEVTERSNRGFAGTWGREKDGGKGSNLLRFDAPCVLQNNRE-FEGK 308
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLS 408
G K+Y +GLFLCRPTGQGKSMLIVRFG T SP + + P W++HQ+A KVFEQDMGFLS
Sbjct: 309 DGVKNYFSGLFLCRPTGQGKSMLIVRFGVTKRSPLVSVLPQWFWHQNACKVFEQDMGFLS 368
Query: 409 SQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVE 468
SQNEVL+KEKVPTK+LY NL+S DTWVAEYRKWMDK GHGMPY+FGH TISLPKVP VVE
Sbjct: 369 SQNEVLMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHRTISLPKVPPVVE 428
Query: 469 HAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAA 528
HAPAGL+A +SAS PAKGGIGTMHAPNLANRYFRH+IHC+ C + +K+F WKN LS A
Sbjct: 429 HAPAGLIAALSASYPAKGGIGTMHAPNLANRYFRHIIHCRSCSNVIKSFELWKNILSATA 488
Query: 529 ALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
LT LAIL RQW+A L SA+LC A YAC AI++NT NFIRTHRRL
Sbjct: 489 VALTTLAILVVSRQWKAVLLGSAALCSAAAYACLRAINLNTNNFIRTHRRL 539
>gi|357137389|ref|XP_003570283.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 539
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/473 (70%), Positives = 382/473 (80%), Gaps = 1/473 (0%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQ 166
P E E + YDW EEWYPLYL+K+VPDDA L LTVFD+Q+VLY+D G LRCH+
Sbjct: 68 PKEEAGEGDEAKGRYYDWKEEWYPLYLSKEVPDDAALPLTVFDRQLVLYRDADGVLRCHE 127
Query: 167 DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKE 226
DRCPHRLAKLSEGQL+DG+LECLYHGWQF+GEGKCVKIPQLP AKIPR+AC R YEV++
Sbjct: 128 DRCPHRLAKLSEGQLVDGKLECLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARNYEVRD 187
Query: 227 SQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 286
SQGVVWVWMS PP+ KLPWFE +AR GF D+ST+HELPYDHSILLENLMDPAH+PIS
Sbjct: 188 SQGVVWVWMSPSNPPDSSKLPWFEPYARAGFTDLSTVHELPYDHSILLENLMDPAHVPIS 247
Query: 287 HDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVD 346
HDRTD++AKREDAQPL FEVTERT RGFAG W RE+ + + LRFEAPCVL N E VD
Sbjct: 248 HDRTDWTAKREDAQPLAFEVTERTRRGFAGYWARERAPHLRSLLRFEAPCVLTNTLEFVD 307
Query: 347 NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGF 406
K G++ + FLCRP GQGK+ML+VRFG+T +SP +K+ P WYFHQ+A KVFEQDMGF
Sbjct: 308 -KDGKEQCFSAQFLCRPAGQGKAMLLVRFGSTASSPLMKVLPQWYFHQNACKVFEQDMGF 366
Query: 407 LSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAV 466
LSSQNEVLL+EKVPTKELY NLRS DTWVAEYR+WMDKAGHGMPYYFGHST+S P VPAV
Sbjct: 367 LSSQNEVLLREKVPTKELYLNLRSSDTWVAEYRRWMDKAGHGMPYYFGHSTLSPPPVPAV 426
Query: 467 VEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLST 526
VE APAG VAG+SAS PAKGGIGT HAPN NRYFRHV+HCKGCR V + KN+
Sbjct: 427 VEQAPAGAVAGISASFPAKGGIGTTHAPNPTNRYFRHVVHCKGCRETVNRYTALKNAFVV 486
Query: 527 AAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
AA+ A A+L A RQW+A L SA++ A YAC + +S+ TTNFIRTHRRL
Sbjct: 487 LAAVAAAAAVLAATRQWKAVWLASAAVLAAASYACGSVVSLVTTNFIRTHRRL 539
>gi|242063354|ref|XP_002452966.1| hypothetical protein SORBIDRAFT_04g035660 [Sorghum bicolor]
gi|241932797|gb|EES05942.1| hypothetical protein SORBIDRAFT_04g035660 [Sorghum bicolor]
Length = 538
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/458 (71%), Positives = 377/458 (82%), Gaps = 1/458 (0%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
YDW EEWYPLYL+K+VPDDA L LTVFD+Q+VL++DG G LRCH+DRCPHRLAKLSEGQ+
Sbjct: 82 YDWKEEWYPLYLSKEVPDDAALPLTVFDRQLVLWRDGNGVLRCHEDRCPHRLAKLSEGQI 141
Query: 182 IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 241
+DG+LECLYHGWQF+GEGKCVKIPQLP AKIPRSAC R YEV++SQGVVWVW+S PP
Sbjct: 142 VDGKLECLYHGWQFDGEGKCVKIPQLPEGAKIPRSACARNYEVRDSQGVVWVWVSDANPP 201
Query: 242 NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
+ KLPWFE +AR GF D+ST+HELPYDHSILLENLMDPAH+PISHDRTD++AKREDAQP
Sbjct: 202 DEGKLPWFEPYARAGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQP 261
Query: 302 LGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLC 361
L F+VTERT RGFAG WGR + N LRFEAPCVL N E D E+ +S FLC
Sbjct: 262 LFFDVTERTPRGFAGYWGRTSTPHLRNLLRFEAPCVLTNTLEYTDKDGTEQCFSAH-FLC 320
Query: 362 RPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT 421
RP GQGKSML+VRFG+T SP K+ P WYFHQ+A KVFEQDMGFLSSQNEVLL+EKVPT
Sbjct: 321 RPAGQGKSMLLVRFGSTLRSPLAKVLPTWYFHQNACKVFEQDMGFLSSQNEVLLREKVPT 380
Query: 422 KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSAS 481
+ELY NLRS DTWVAEYRKWMD+AGHGMPYYFGH+T+S P VPAVVE APAG VAG+SAS
Sbjct: 381 RELYLNLRSSDTWVAEYRKWMDRAGHGMPYYFGHTTLSPPPVPAVVEQAPAGAVAGISAS 440
Query: 482 LPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR 541
PAKGG+GT+HAPN NRYFRHV+HCKGCR+ VK + + KN+ + AA A A+L A R
Sbjct: 441 FPAKGGVGTVHAPNPTNRYFRHVVHCKGCRATVKKYTSLKNAFAALAAAAVAAAVLAATR 500
Query: 542 QWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
QW+A L ++++ A YAC +S+ TTNFIRTHRRL
Sbjct: 501 QWKAVLLAASAVLAAASYACDALVSLLTTNFIRTHRRL 538
>gi|115449167|ref|NP_001048363.1| Os02g0792800 [Oryza sativa Japonica Group]
gi|47497136|dbj|BAD19185.1| putative Rieske iron-sulfur protein Tic55 [Oryza sativa Japonica
Group]
gi|47497583|dbj|BAD19653.1| putative Rieske iron-sulfur protein Tic55 [Oryza sativa Japonica
Group]
gi|113537894|dbj|BAF10277.1| Os02g0792800 [Oryza sativa Japonica Group]
gi|125583977|gb|EAZ24908.1| hypothetical protein OsJ_08688 [Oryza sativa Japonica Group]
gi|215740658|dbj|BAG97314.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767906|dbj|BAH00135.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 539
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/469 (71%), Positives = 383/469 (81%), Gaps = 1/469 (0%)
Query: 111 EESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCP 170
+E + A YDW EEWYPLYL K+VPDDA L LTVFD+Q+VLY+D G LRCH+DRCP
Sbjct: 72 KEQEDDASAARYDWREEWYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCP 131
Query: 171 HRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGV 230
HRLAKLSEGQL+DG+LECLYHGWQF+GEGKCVKIPQLP AKIPR+AC R+YEV++SQGV
Sbjct: 132 HRLAKLSEGQLVDGKLECLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARSYEVRDSQGV 191
Query: 231 VWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
VW WMS PP+ KLPWFE +ARPGF D+ST+HELPYDHSILLENLMDPAH+PISHDRT
Sbjct: 192 VWAWMSGTNPPDERKLPWFEPYARPGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRT 251
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
D++AKREDAQPL FEVTERT RGFAG WG+++ + N LRFEAPCVL N E VD K G
Sbjct: 252 DWTAKREDAQPLFFEVTERTPRGFAGYWGKQRTPHLRNLLRFEAPCVLTNTLEFVD-KDG 310
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
++ + FLCRP GQGKSML+VRFG+T TSP +K+ P WYFHQ+A KVFEQDMGFLSSQ
Sbjct: 311 KEQCFSAHFLCRPAGQGKSMLLVRFGSTQTSPLVKVLPRWYFHQNACKVFEQDMGFLSSQ 370
Query: 411 NEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHA 470
NEVLL+EKVPTKELY NLRS DTWVAEYR+WMD+AGHGMPYYFGHST+S P VPAVVE A
Sbjct: 371 NEVLLREKVPTKELYLNLRSSDTWVAEYRRWMDRAGHGMPYYFGHSTLSPPPVPAVVEQA 430
Query: 471 PAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAAL 530
PAG VAG+SAS PAKGG+G HAPN NRYFRHV+HCKGCR +VK + + KN+ + AA
Sbjct: 431 PAGAVAGMSASFPAKGGVGATHAPNPTNRYFRHVVHCKGCRDSVKRYASLKNAFAALAAA 490
Query: 531 LTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
A AIL A RQ +A L SA+ A YAC+ +S+ TTNFIRTHRRL
Sbjct: 491 AVAAAILAATRQLKAVLLASAAALAAASYACNWVLSLITTNFIRTHRRL 539
>gi|293333760|ref|NP_001168313.1| hypothetical protein [Zea mays]
gi|223947409|gb|ACN27788.1| unknown [Zea mays]
gi|413939284|gb|AFW73835.1| hypothetical protein ZEAMMB73_526484 [Zea mays]
Length = 538
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/458 (70%), Positives = 372/458 (81%), Gaps = 1/458 (0%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
YDW EEWYPLYL K+VPDDA L LTVFD+Q+VL++D G LRCH+DRCPHRLAKLSEGQ+
Sbjct: 82 YDWREEWYPLYLAKEVPDDAALPLTVFDRQLVLWRDAHGVLRCHEDRCPHRLAKLSEGQI 141
Query: 182 IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 241
+DG+LECLYHGWQF+G+GKCVKIPQLP AKIPRSAC R YEV++SQGVVWVWMS PP
Sbjct: 142 VDGKLECLYHGWQFDGDGKCVKIPQLPEGAKIPRSACARNYEVRDSQGVVWVWMSDANPP 201
Query: 242 NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
+ KLPWFE +AR GF D+ST+HELPYDHSILLENLMDPAH+PISHDRTD++AKREDAQP
Sbjct: 202 DEGKLPWFEPYARAGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQP 261
Query: 302 LGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLC 361
L F+VTERT RGFAG WGR + N LRFEAPCVL N E D K G + + FLC
Sbjct: 262 LFFDVTERTPRGFAGYWGRTGTPHLRNLLRFEAPCVLTNTLEFAD-KDGREQCFSAHFLC 320
Query: 362 RPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT 421
RP GQGKSML+VRFG+T SP K+ P WYFHQ+A KVFEQDMGFLSSQNEVLL+EK+PT
Sbjct: 321 RPAGQGKSMLLVRFGSTLRSPLAKVLPSWYFHQNACKVFEQDMGFLSSQNEVLLREKLPT 380
Query: 422 KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSAS 481
+ELY NLRS DTWVAEYRKWMD+AGHGMPYYFGHST+S P VPAVVE APAG VAG+SAS
Sbjct: 381 RELYLNLRSSDTWVAEYRKWMDRAGHGMPYYFGHSTLSPPPVPAVVEQAPAGAVAGISAS 440
Query: 482 LPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR 541
PAKGG+G +HAPN NRYFRHV+HCKGCR+ VK + + K + AA + AIL A R
Sbjct: 441 FPAKGGVGMVHAPNPTNRYFRHVVHCKGCRATVKKYTSLKTVFAALAAAALSAAILAATR 500
Query: 542 QWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
QW+A + ++++ A YAC +S+ TTNFIRTHRRL
Sbjct: 501 QWKAVLVAASAVLAAASYACDAVLSLITTNFIRTHRRL 538
>gi|125541435|gb|EAY87830.1| hypothetical protein OsI_09250 [Oryza sativa Indica Group]
Length = 539
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/469 (70%), Positives = 382/469 (81%), Gaps = 1/469 (0%)
Query: 111 EESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCP 170
+E + A YDW EEWYPLYL K+VPDDA L LTVFD+Q+VLY+D G LRCH+DRCP
Sbjct: 72 KEQEDDASAARYDWREEWYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCP 131
Query: 171 HRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGV 230
HRLAKLSEGQL+DG+LECLYHGWQF+GEGKCVKIPQLP AKIPR+AC R+YEV++SQGV
Sbjct: 132 HRLAKLSEGQLVDGKLECLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARSYEVRDSQGV 191
Query: 231 VWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
VW WMS PP+ KLPWFE +ARPGF D+ST+HELPYDHSILLENLMDPAH+PISHDRT
Sbjct: 192 VWAWMSGTNPPDERKLPWFEPYARPGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRT 251
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
D++AKREDAQPL FEVTERT GFAG WG+++ + N LRFEAPCVL N E VD K G
Sbjct: 252 DWTAKREDAQPLFFEVTERTPGGFAGYWGKQRTPHLRNLLRFEAPCVLTNTLEFVD-KDG 310
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
++ + FLCRP GQGKSML+VRFG+T TSP +K+ P WYFHQ+A KVFEQDMGFLSSQ
Sbjct: 311 KEQCFSAHFLCRPAGQGKSMLLVRFGSTQTSPLVKVLPRWYFHQNACKVFEQDMGFLSSQ 370
Query: 411 NEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHA 470
NEVLL+EK+PTKELY NLRS DTWVAEYR+WMD+AGHGMPYYFGHST+S P VPAVVE A
Sbjct: 371 NEVLLREKMPTKELYLNLRSSDTWVAEYRRWMDRAGHGMPYYFGHSTLSPPPVPAVVEQA 430
Query: 471 PAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAAL 530
PAG VAG+SAS PAKGG+G HAPN NRYFRHV+HCKGCR +VK + + KN+ + AA
Sbjct: 431 PAGAVAGMSASFPAKGGVGATHAPNPTNRYFRHVVHCKGCRDSVKRYASLKNAFAALAAA 490
Query: 531 LTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
A AIL A RQ +A L SA+ A YAC+ +S+ TTNFIRTHRRL
Sbjct: 491 AVAAAILAATRQLKAVLLASAAALAAASYACNWVLSLITTNFIRTHRRL 539
>gi|168002521|ref|XP_001753962.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694938|gb|EDQ81284.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 481
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/474 (56%), Positives = 335/474 (70%), Gaps = 4/474 (0%)
Query: 108 ASEEESRGERRVAD---YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRC 164
A E+ GE V+D YDW +EWYP+YLT ++P APLGLTVFD+Q+VL+ D KGEL C
Sbjct: 6 AGRVEAEGESAVSDGVEYDWEKEWYPMYLTDEMPKAAPLGLTVFDRQLVLFYDDKGELNC 65
Query: 165 HQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEV 224
+DRCPHRLAKLSEG++ DG+LECLYHGWQFEG G+C KIPQL AKIP+ AC + YEV
Sbjct: 66 FEDRCPHRLAKLSEGKMTDGKLECLYHGWQFEGSGQCTKIPQLAPGAKIPKQACAKKYEV 125
Query: 225 KESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 284
K SQGV+WVW+ + +P K+PW+E++ R GF +STIHELPYD+SILLENLMDPAHIP
Sbjct: 126 KVSQGVIWVWLGDRATADPKKVPWYEHYEREGFYHLSTIHELPYDYSILLENLMDPAHIP 185
Query: 285 ISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRES 344
ISHDRTD +AKRE+AQ L FEVTERT RGFAG W N RFEAPC L+N++
Sbjct: 186 ISHDRTDTNAKRENAQALVFEVTERTSRGFAGIWKEISSPEFTNTTRFEAPCCLRNDK-V 244
Query: 345 VDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDM 404
VD G K Y + +FLCRP+GQGKSMLIVRFG+T K P W+ H++++ VFEQDM
Sbjct: 245 VDKPDGSKDYLSAVFLCRPSGQGKSMLIVRFGSTKFPDIFKKIPGWFLHKTSNTVFEQDM 304
Query: 405 GFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVP 464
GFL+SQN L+K+ PTK+LY NL+S DTWV+E+RKW D+ G GMPYYFGH T S P
Sbjct: 305 GFLASQNAYLVKKNQPTKDLYLNLKSSDTWVSEFRKWNDRVGRGMPYYFGHQTTSAAINP 364
Query: 465 AVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL 524
A++E APAG A ++S PA+G G M A + NRYFRHV+HCK C A+ F ++
Sbjct: 365 AILEAAPAGFSAAAASSYPAQGSFGEMFARDPTNRYFRHVVHCKSCLKALNNFQKFQKVG 424
Query: 525 STAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRR 578
+ T +AI + WRA + A L A YACS ++ T N++R HR+
Sbjct: 425 IALGLIATGVAITLSSVMWRASFVTIALLAFATSYACSRGVAALTVNYVRPHRK 478
>gi|168040321|ref|XP_001772643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676019|gb|EDQ62507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 487
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/468 (57%), Positives = 341/468 (72%), Gaps = 1/468 (0%)
Query: 111 EESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCP 170
EE + V +YDW +EWYP+YLT ++P APLGLTVFD+++VL+ D KGEL C +DRCP
Sbjct: 18 EEENEVKDVVEYDWEKEWYPMYLTAEMPKAAPLGLTVFDRELVLFYDDKGELHCFEDRCP 77
Query: 171 HRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGV 230
HRLAKLSEG++ DG+LECLYHGWQFEG G+C KIPQL AKIP+ AC + YEVK SQGV
Sbjct: 78 HRLAKLSEGKVTDGKLECLYHGWQFEGSGQCTKIPQLVPGAKIPKQACAKAYEVKISQGV 137
Query: 231 VWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
VWVW+ + +P KLPWFE++ R GFQ +S IHELPYD+SIL+ENLMDPAHIPISHDRT
Sbjct: 138 VWVWLGDRATADPSKLPWFEHYEREGFQHISAIHELPYDYSILVENLMDPAHIPISHDRT 197
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
D SA+RE+AQ L FEVTER+ RGFAG+W S N RFEAPC+++N++E V
Sbjct: 198 DPSARRENAQALVFEVTERSSRGFAGKWKEISSPSFTNATRFEAPCIVRNDKEYVKPDGT 257
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
+ H S +FLCRP GQGK MLI RFG+T +K+ P WY H +++ VFEQDMGFL+SQ
Sbjct: 258 DAHMS-AVFLCRPAGQGKCMLIARFGSTNFPGSLKMIPPWYIHITSNTVFEQDMGFLASQ 316
Query: 411 NEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHA 470
NE L+K+ +PTK+LY NL+S DTWV+E+RKW D GHGMPYYFGH TIS K PAVVE A
Sbjct: 317 NEDLVKKNLPTKDLYLNLKSSDTWVSEFRKWNDLVGHGMPYYFGHKTISQAKNPAVVEVA 376
Query: 471 PAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAAL 530
PAG A ++S PA+G G M A + NRYFRHV+HC+ C SA+ +F T++ +
Sbjct: 377 PAGFSAAAASSYPAQGSFGEMFARDPTNRYFRHVVHCRSCLSALGSFQTYQKVATAFGLA 436
Query: 531 LTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRR 578
+AI+ WRA +++A L A YACS I++ T N++R HR+
Sbjct: 437 AAGVAIVLPSVVWRATLVITALLAFAAAYACSRGIAILTKNYVRPHRK 484
>gi|326521744|dbj|BAK00448.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 428
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/359 (69%), Positives = 286/359 (79%), Gaps = 1/359 (0%)
Query: 221 TYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 280
YEV++SQGVVWVWMS +PP+ KLPWFE +ARPGF D+ST+HELPYDHSILLENLMDP
Sbjct: 71 NYEVRDSQGVVWVWMSPASPPDAKKLPWFEPYARPGFTDLSTVHELPYDHSILLENLMDP 130
Query: 281 AHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN 340
AH+PISHDRTD++AKREDAQPL F+V ERT RGFAG W RE+ +PN LRFEAPCVL N
Sbjct: 131 AHVPISHDRTDWTAKREDAQPLAFDVAERTARGFAGHWWRERAPHLPNLLRFEAPCVLSN 190
Query: 341 NRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVF 400
E VD K G++ + FLCRP GQGKSML+VRFG+T +SP +K+ P WY HQ+A KVF
Sbjct: 191 TLEFVD-KDGKEQCFSAQFLCRPAGQGKSMLLVRFGSTASSPLVKVLPKWYLHQNACKVF 249
Query: 401 EQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISL 460
EQDMGFLSSQNEVLL+EKVPTKELY NLRS DTWVAEYR+WMD+AGHGMPYYFGHSTIS
Sbjct: 250 EQDMGFLSSQNEVLLREKVPTKELYLNLRSSDTWVAEYRRWMDRAGHGMPYYFGHSTISP 309
Query: 461 PKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTW 520
P VPAVVE APAG AG+SAS PAKGG GT HAPN NRYFRHV+HCKGCR V +
Sbjct: 310 PPVPAVVEQAPAGAAAGISASFPAKGGAGTQHAPNPTNRYFRHVVHCKGCRDTVNRYTAL 369
Query: 521 KNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
K + AA+ A A+L A RQW+A L +A++ A YAC + +S+ TTNFIRTHRRL
Sbjct: 370 KKAFVVLAAVAAAAAVLAATRQWKAVLLGAAAVLAAASYACGSVVSLITTNFIRTHRRL 428
>gi|62320194|dbj|BAD94416.1| Rieske iron-sulfur like protein [Arabidopsis thaliana]
Length = 283
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/284 (78%), Positives = 250/284 (88%), Gaps = 2/284 (0%)
Query: 235 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
MS KTPPNP+KLPWFENFARPGF D+ST HELPYDHSILLENLMDPAH+PISHDRTD++A
Sbjct: 1 MSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPISHDRTDFTA 60
Query: 295 KREDAQPLGFEVTERTDRGFAGQWGREKDGSM-PNFLRFEAPCVLQNNRESVDNKTGEKH 353
KREDAQPL FEVTER++RGFAG WGREK+G N LRF+APCVLQNNRE + K G K+
Sbjct: 61 KREDAQPLVFEVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCVLQNNRE-FEGKDGVKN 119
Query: 354 YSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEV 413
Y +GLFLCRPTGQGKSMLIVRFG T SP + + P W++HQ+A KVFEQDMGFLSSQNEV
Sbjct: 120 YFSGLFLCRPTGQGKSMLIVRFGVTKRSPLVSVLPQWFWHQNACKVFEQDMGFLSSQNEV 179
Query: 414 LLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAG 473
L+KEKVPTK+LY NL+S DTWVAEYRKWMDK GHGMPY+FGH TISLPKVP VVEHAPAG
Sbjct: 180 LMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHRTISLPKVPPVVEHAPAG 239
Query: 474 LVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAF 517
L+A +SAS PAKGGIGTMHAPNLANRYFRH+IHC+ C + +K+F
Sbjct: 240 LIAALSASYPAKGGIGTMHAPNLANRYFRHIIHCRSCSNVIKSF 283
>gi|238015070|gb|ACR38570.1| unknown [Zea mays]
Length = 344
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/345 (67%), Positives = 270/345 (78%), Gaps = 1/345 (0%)
Query: 235 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
MS PP+ KLPWFE +AR GF D+ST+HELPYDHSILLENLMDPAH+PISHDRTD++A
Sbjct: 1 MSDANPPDEGKLPWFEPYARAGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTA 60
Query: 295 KREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHY 354
KREDAQPL F+VTERT RGFAG WGR + N LRFEAPCVL N E D K G +
Sbjct: 61 KREDAQPLFFDVTERTPRGFAGYWGRTGTPHLRNLLRFEAPCVLTNTLEFAD-KDGREQC 119
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVL 414
+ FLCRP GQGKSML+VRFG+T SP K+ P WYFHQ+A KVFEQDMGFLSSQNEVL
Sbjct: 120 FSAHFLCRPAGQGKSMLLVRFGSTLRSPLAKVLPSWYFHQNACKVFEQDMGFLSSQNEVL 179
Query: 415 LKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGL 474
L+EK+PT+ELY NLRS DTWVAEYRKWMD+AGHGMPYYFGHST+S P VPAVVE APAG
Sbjct: 180 LREKLPTRELYLNLRSSDTWVAEYRKWMDRAGHGMPYYFGHSTLSPPPVPAVVEQAPAGA 239
Query: 475 VAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTAL 534
VAG+SAS PAKGG+G +HAPN NRYFRHV+HCKGCR+ VK + + K + AA +
Sbjct: 240 VAGISASFPAKGGVGMVHAPNPTNRYFRHVVHCKGCRATVKKYTSLKTVFAALAAAALSA 299
Query: 535 AILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
AIL A RQW+A + ++++ A YAC +S+ TTNFIRTHRRL
Sbjct: 300 AILAATRQWKAVLVAASAVLAAASYACDAVLSLITTNFIRTHRRL 344
>gi|388495350|gb|AFK35741.1| unknown [Lotus japonicus]
Length = 210
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 172/210 (81%), Positives = 186/210 (88%)
Query: 370 MLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLR 429
MLIVRFGTT +P KLFP+WYFHQ+ASKVFEQDMGFLSSQNE+LLKEK+PTKELY NL+
Sbjct: 1 MLIVRFGTTKRTPVAKLFPEWYFHQNASKVFEQDMGFLSSQNEILLKEKLPTKELYLNLK 60
Query: 430 SIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIG 489
S DTWVAEYRKWMDK GHGMPY+FGHSTISLP PAVVEHAPAGLVAG+SAS PAKGGIG
Sbjct: 61 SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPNEPAVVEHAPAGLVAGLSASSPAKGGIG 120
Query: 490 TMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLV 549
TMHAPNLANRYFRHVIHCKGCR+ VKAF WKN+L+ A ALAIL +GRQW+A LV
Sbjct: 121 TMHAPNLANRYFRHVIHCKGCRTVVKAFQAWKNALTAVAVASAALAILVSGRQWKALLLV 180
Query: 550 SASLCLAGVYACSTAISMNTTNFIRTHRRL 579
SASLC GVYACSTAI+MNTTNFIRTHRRL
Sbjct: 181 SASLCSVGVYACSTAIAMNTTNFIRTHRRL 210
>gi|186682267|ref|YP_001865463.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186464719|gb|ACC80520.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 451
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 243/460 (52%), Gaps = 36/460 (7%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQ 180
+++W + WYP+ +D+P + P +++++ VL+KD G+L C DRC HR A+LS+GQ
Sbjct: 25 EFNWRQSWYPVCFLQDLPTNRPYTFSLYEEPFVLFKDQNGQLICLTDRCSHRAARLSDGQ 84
Query: 181 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 240
+IDG++EC YHGWQF G+C+ IPQL +DAKIP +ACV +++V E QG++W+W +
Sbjct: 85 IIDGKIECSYHGWQFGNNGQCLHIPQLASDAKIPVNACVPSFKVLERQGIIWMWAGEAET 144
Query: 241 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ +P ++ +P ++ + +LPYD S +EN++DPAH+PISHD REDAQ
Sbjct: 145 AIDELIPSLPDWNKPECFNLDYVRDLPYDQSYFIENIIDPAHVPISHD--GIIGSREDAQ 202
Query: 301 PLGFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNNRESVDNKTGEKHYSTGLF 359
L EV E +G G+W R + ++P L F AP ++ +V K + T L+
Sbjct: 203 ALDIEVIESNIQGIKGRWQRTRTPNLPWISLDFIAPNLILYKFANVQQG---KFWGTALY 259
Query: 360 LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSA-SKVFEQDMGFLSSQNEVLLKEK 418
P G+ + +++R + KL P W H +K+ E D+ + Q + + K
Sbjct: 260 SI-PLGKNRCRILIRNYSNSFPQKTKLMPPWLDHILIRNKILEGDLQLVVEQKAQIERLK 318
Query: 419 VPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGV 478
KE+Y L++ DT V EYRKW+DK G +P+Y G+ST V
Sbjct: 319 KNLKEVYLPLKTSDTLVVEYRKWLDKFGSSLPFYQGYST-----------------SKNV 361
Query: 479 SASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILG 538
S + I +R+ +H I C C A + N + S A L A+ IL
Sbjct: 362 GNSESDEKLITL-------DRFSQHTIICHSCNQAYQVTNKVRQSCIGVAIALAAIGILA 414
Query: 539 AGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRR 578
+ R + + S+ + + + A ++ T+F R++ R
Sbjct: 415 DDSRIR---IAAISVSITAIVISAMAQTLK-THFERSYTR 450
>gi|425455977|ref|ZP_18835688.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9807]
gi|389803035|emb|CCI17994.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9807]
Length = 446
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 224/413 (54%), Gaps = 34/413 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQEGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVVERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + +LPY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDLPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMP-NFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT-G 365
E + RG QW ++ +L F AP ++ + R S+ N H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLV-HYRFSMPN----PHWYAGLALYGISLG 255
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY 425
QG+S L+VR + W H S++ E D+ + SQ +++ K + ++LY
Sbjct: 256 QGRSRLLVRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
L+S D V E R+W D+ G PYY G+++ + A+ +S LP
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---QRTTAI----------DLSDPLP-- 360
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILG 538
+RY RH +HC+ C A + K LL LAIL
Sbjct: 361 -----------LDRYSRHTVHCRTCSDAHEKMVKTKQIAILMGILLVLLAILS 402
>gi|425448723|ref|ZP_18828567.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 7941]
gi|389764003|emb|CCI09609.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 7941]
Length = 446
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 237/453 (52%), Gaps = 37/453 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMP-NFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT-G 365
E + RG QW + +L F AP ++ + R S+ N H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSHNPQESWKYLDFIAPNLV-HYRFSLPN----PHWCAGLALYGISLG 255
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY 425
QG+S L+VR + W H S++ E D+ + SQ +++ K + ++LY
Sbjct: 256 QGRSRLLVRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
L+S D V E R+W D+ G PYY G+++ + A+ P L
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---QRTTAIDLFDPLPL----------- 361
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRA 545
+RY RH +HC+ C +A + K LL LAIL ++
Sbjct: 362 ------------DRYSRHTVHCRTCSAAHENMVKTKQIAILMGILLVLLAILSPN---QS 406
Query: 546 FCLVSASLCLAGVYACSTAISMNTTNFIRTHRR 578
++A + A + A + T F RTH +
Sbjct: 407 IYQITALIFAILALAVAIAANYTRTKFERTHEK 439
>gi|425447801|ref|ZP_18827783.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9443]
gi|389731630|emb|CCI04395.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9443]
Length = 446
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 224/416 (53%), Gaps = 40/416 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQEGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVVERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + +LPY+ LLENL DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDLPYEQGYLLENLFDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMPN----FLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRP 363
E + RG QW ++ P +L F AP ++ + R S+ N H+ GL L
Sbjct: 201 EISARGIRSQW---RNSGNPQESWKYLDFIAPNLV-HYRFSMPN----PHWYAGLALYGI 252
Query: 364 T-GQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTK 422
+ GQG+S L+VR + W H S++ E D+ + SQ +++ K + +
Sbjct: 253 SLGQGRSRLLVRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQ 312
Query: 423 ELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASL 482
+LY L+S D V E R+W D+ G PYY G+++ + A+ +S L
Sbjct: 313 KLYLPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---QRTTAI----------DLSDPL 359
Query: 483 PAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILG 538
P +RY RH +HC+ C A + K LL LAIL
Sbjct: 360 P-------------LDRYSRHTVHCRTCSDAHEKMVKTKQIAILMGILLVLLAILS 402
>gi|425470320|ref|ZP_18849190.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9701]
gi|389884067|emb|CCI35571.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9701]
Length = 446
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 239/453 (52%), Gaps = 37/453 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVMERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVYTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMP-NFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT-G 365
E + RG QW ++ +L F AP ++ + R S+ N + GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLV-HYRFSLPNPD----WCAGLALYGISLG 255
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY 425
QG+S L++R + W H S++ E D+ + SQ +++ K + ++LY
Sbjct: 256 QGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
L+S D V E R+W D+ G PYY G+++ + A+ +S LP
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---QRTTAI----------DLSDPLP-- 360
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRA 545
+RY RH +HC+ C +A + K LL LAIL ++
Sbjct: 361 -----------LDRYSRHTVHCRTCSAAHENMVKTKQIAILMGILLVLLAILSPN---QS 406
Query: 546 FCLVSASLCLAGVYACSTAISMNTTNFIRTHRR 578
++A + A + A + T F RT+ +
Sbjct: 407 IYQITALIFAILALAVAIAANYTRTKFERTYEK 439
>gi|257059415|ref|YP_003137303.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589581|gb|ACV00468.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 450
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 222/434 (51%), Gaps = 31/434 (7%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
DW WYP+ +D P P G T++D+ VL+ + +G+L C QD CPHR AKLS+GQ++
Sbjct: 27 DWKNCWYPITFVQDFPKSRPYGFTLYDEPFVLFVNKQGKLVCLQDICPHRAAKLSDGQIL 86
Query: 183 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 242
DG LECLYHGWQF EGKCV IPQLP D IP++AC+ ++ V + QG++W W +K +
Sbjct: 87 DGNLECLYHGWQFNDEGKCVHIPQLPDDTPIPKNACITSFFVVQKQGIIWFWRGKKEEAD 146
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
++P N + + +LPYD + L+EN++DPAH+ ISH + R++AQPL
Sbjct: 147 ETRIPTIANLDKRDMMVTDCMIDLPYDQTYLIENVVDPAHVHISHHGS--LGNRKNAQPL 204
Query: 303 GFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNNRESVDNKTGEKHYSTGLFLC 361
EV E++ G + K +M L F AP ++ + G T L+
Sbjct: 205 TMEVKEKSIEGIKSVYKYAKTAAMGWITLDFIAPNLVMYEFTLPNQLMG----GTALY-S 259
Query: 362 RPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT 421
P+G+G L++R + + +L P W H ++++ E+D F+ ++ +L K K
Sbjct: 260 LPSGKGSCRLLLRNYSNIPNWKARLKPRWLLHLGSNRILEEDSVFIMAEQSILEKSKQTM 319
Query: 422 KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSAS 481
++L L++ D V EYRKW+D G +P+Y G++T A
Sbjct: 320 QDLILPLKTSDLLVVEYRKWLDTFGKALPFYQGYTT----------------------AK 357
Query: 482 LPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR 541
K G + L +R+ +H C CR + + L A LL A AIL G
Sbjct: 358 SSPKTGENSQTKVTL-DRFKQHTQICHSCRQTYQRIIITQKVLIAVAILLAACAILTDGT 416
Query: 542 QWRAFCLVSASLCL 555
+ ++ + L
Sbjct: 417 KLEIISILLSLFSL 430
>gi|332712318|ref|ZP_08432246.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
gi|332349124|gb|EGJ28736.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
Length = 452
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 214/407 (52%), Gaps = 33/407 (8%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQ 180
+++W + WYP+ +D+P D P +++D+ +VL+++ G+L C +RCPHR AKLSEGQ
Sbjct: 25 EFNWQQCWYPVTFVQDLPTDRPYSFSLYDEPLVLFRNQDGKLACLTNRCPHRAAKLSEGQ 84
Query: 181 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 240
+IDG++ECLYHGWQF +G+C+ IPQLP DAKIP ACV+++ V E QG+VWVWM +
Sbjct: 85 IIDGKIECLYHGWQFGRDGQCLHIPQLPEDAKIPAKACVQSFTVVERQGIVWVWMGKPEA 144
Query: 241 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ + +P + P + +LPYD + +EN +DP+H+ ISH+ T + R+ AQ
Sbjct: 145 ADQEGIPTVADLDNPTVASSDYMIDLPYDQTYFIENALDPSHLYISHEGT--LSSRKYAQ 202
Query: 301 PLGFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNNRESVDNKTGEKHYSTG-- 357
PL EV E + G G++ + + + P L F AP N + + +GEK G
Sbjct: 203 PLEMEVLESSTFGIRGRYRKTRQKNSPWVNLDFVAP-----NLVTYRSSSGEKSVRIGGA 257
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKE 417
P G+GK +I+R ++ +KL P W H K E+D+ + Q + +
Sbjct: 258 ALYSLPLGKGKCRIIIRNYNNHSTWKLKLQPRWMEHWYRDKFLEEDLPLVVGQQAEVERL 317
Query: 418 KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAG 477
LY L++ D + EYRKW+DK G +P+Y G+ST L + PA L
Sbjct: 318 GTSLNSLYLQLKTSDMLLIEYRKWLDKFGTSLPFYQGYSTRKLSQKEREDNQQPAPL--- 374
Query: 478 VSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL 524
+R RH C C A + N K +
Sbjct: 375 --------------------DRLRRHTQICGSCNRAYQVTNRLKTTF 401
>gi|425441278|ref|ZP_18821558.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9717]
gi|389718043|emb|CCH97943.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9717]
Length = 446
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 223/413 (53%), Gaps = 34/413 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMP-NFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT-G 365
E + RG QW ++ +L F AP ++ + R ++ N H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLV-HYRFALPN----PHWCAGLALYGISLG 255
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY 425
QG+S L++R + W H S++ E D+ + SQ +++ K + ++LY
Sbjct: 256 QGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
L+S D V E R+W D+ G PYY G+++ + A+ +S LP
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---QRTTAL----------DLSDPLP-- 360
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILG 538
+RY RH +HC+ C A + K LL LAIL
Sbjct: 361 -----------LDRYSRHTVHCRTCSDAHENMVKTKQIAILMGILLVLLAILS 402
>gi|218246369|ref|YP_002371740.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166847|gb|ACK65584.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 450
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 222/434 (51%), Gaps = 31/434 (7%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
DW WYP+ +D P P G T++D+ VL+ + +G+L C QD CPHR AKLS+GQ++
Sbjct: 27 DWKNCWYPITFVQDFPKSRPYGFTLYDEPFVLFVNNQGKLVCLQDICPHRAAKLSDGQIL 86
Query: 183 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 242
DG LECLYHGWQF EGKCV IPQLP D IP++AC+ ++ V + QG++W W +K +
Sbjct: 87 DGNLECLYHGWQFNDEGKCVHIPQLPDDTPIPKNACITSFFVVQKQGIIWFWRGKKEEAD 146
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
++P N + + +LPYD + L+EN++DPAH+ ISH + R++AQPL
Sbjct: 147 ETRIPTIANLDKRDMMVTDCMIDLPYDQTYLIENVVDPAHVHISHHGS--LGNRKNAQPL 204
Query: 303 GFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNNRESVDNKTGEKHYSTGLFLC 361
EV E++ G + K +M L F AP ++ + G T L+
Sbjct: 205 TMEVKEKSIEGIKSVYKYAKTAAMGWITLDFIAPNLVMYEFTLPNQLMG----GTALY-S 259
Query: 362 RPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT 421
P+G+G L++R + + +L P W H ++++ E+D F+ ++ +L K +
Sbjct: 260 LPSGKGSCRLLLRNYSNIPNWKARLKPRWLLHLGSNRILEEDSVFIMAEQSILEKSRQTM 319
Query: 422 KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSAS 481
++L L++ D V EYRKW+D G +P+Y G++T A
Sbjct: 320 QDLILPLKTSDLLVVEYRKWLDTFGKALPFYQGYTT----------------------AK 357
Query: 482 LPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR 541
K G + L +R+ +H C CR + + L A LL A AIL G
Sbjct: 358 SSPKTGENSQTKVTL-DRFKQHTQICHSCRQTHQRIIITQKVLIAVAILLAACAILTDGT 416
Query: 542 QWRAFCLVSASLCL 555
+ ++ + L
Sbjct: 417 KLEIISILLSLFSL 430
>gi|425464229|ref|ZP_18843551.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9809]
gi|389833823|emb|CCI21361.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9809]
Length = 446
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 215/388 (55%), Gaps = 34/388 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMP-NFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT-G 365
E + RG QW ++ +L F AP ++ + R S+ N H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLV-HYRFSLPN----PHWCAGLALYGISLG 255
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY 425
QG+S L++R + W H S++ E D+ + SQ +++ K + ++LY
Sbjct: 256 QGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
L+S D V E R+W D+ G +PYY G+++ + +S LP
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSLPYYQGYTSQRTTAI-------------DLSDPLP-- 360
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSA 513
+RY RH +HC+ C +A
Sbjct: 361 -----------LDRYSRHTVHCRTCSTA 377
>gi|440753320|ref|ZP_20932523.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|440177813|gb|ELP57086.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
Length = 446
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 214/388 (55%), Gaps = 34/388 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMP-NFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT-G 365
E + RG QW ++ +L F AP ++ + R S+ N H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLV-HYRFSLPN----PHWCAGLALYGISLG 255
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY 425
QG+S L+VR + W H S++ E D+ + SQ +++ K + ++LY
Sbjct: 256 QGRSRLLVRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
L+S D V E R+W D+ G PYY G+++ + A+ P L
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---QRTTAIDLFDPLPL----------- 361
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSA 513
+RY RH +HC+ C +A
Sbjct: 362 ------------DRYSRHTVHCRTCSAA 377
>gi|166363589|ref|YP_001655862.1| dioxygenase Rieske iron-sulfur component [Microcystis aeruginosa
NIES-843]
gi|166085962|dbj|BAG00670.1| probable dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa NIES-843]
Length = 446
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 213/388 (54%), Gaps = 34/388 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVMERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMP-NFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT-G 365
E + RG QW ++ +L F AP ++ + R S+ N H+ GL L + G
Sbjct: 201 EVSARGIRSQWRNSRNPQESWKYLDFIAPNLV-HYRFSLPN----PHWCAGLALYGISLG 255
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY 425
QG+S L++R + W H S++ E D+ + SQ +++ K + ++LY
Sbjct: 256 QGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
L+S D V E R+W D+ G PYY G+++ + +S LP
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTSQRTTAI-------------DLSDPLP-- 360
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSA 513
+RY RH +HC+ C A
Sbjct: 361 -----------LDRYSRHTVHCRTCSDA 377
>gi|425437604|ref|ZP_18818019.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9432]
gi|389677378|emb|CCH93660.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9432]
Length = 446
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 214/388 (55%), Gaps = 34/388 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMP-NFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT-G 365
E + RG QW ++ +L F AP ++ + R S+ N H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLV-HYRFSLPN----PHWCAGLALYGISLG 255
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY 425
QG+S L++R + W H S++ E D+ + SQ +++ K + ++LY
Sbjct: 256 QGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
L+S D V E R+W D+ G PYY G+++ + A+ P L
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---QRTTAIDLFDPLPL----------- 361
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSA 513
+RY RH +HC+ C +A
Sbjct: 362 ------------DRYSRHTVHCRTCSAA 377
>gi|422305128|ref|ZP_16392465.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9806]
gi|389789620|emb|CCI14428.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9806]
Length = 446
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 215/391 (54%), Gaps = 40/391 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMPN----FLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRP 363
E + RG QW ++ P +L F AP ++ + R S+ N H+ GL L
Sbjct: 201 EVSARGIRSQW---RNSCNPQESWKYLDFIAPNLV-HYRFSLPN----PHWCAGLALYGI 252
Query: 364 T-GQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTK 422
+ GQG+S L++R + W H S++ E D+ + SQ +++ K + +
Sbjct: 253 SLGQGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQ 312
Query: 423 ELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASL 482
+LY L+S D V E R+W D+ G PYY G+++ + +S L
Sbjct: 313 KLYLPLKSSDALVIELRQWFDRYGDSFPYYQGYTSQRTTAI-------------DLSDPL 359
Query: 483 PAKGGIGTMHAPNLANRYFRHVIHCKGCRSA 513
P +RY RH +HC+ C +A
Sbjct: 360 P-------------LDRYSRHTVHCRTCSTA 377
>gi|425460637|ref|ZP_18840118.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9808]
gi|389826681|emb|CCI22681.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9808]
Length = 446
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 213/388 (54%), Gaps = 34/388 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +D + P +++ Q +++++D +G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 308 ERTDRGFAGQWGREKDGSMP-NFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT-G 365
E + RG QW ++ +L F AP ++ + R S+ N + GL L + G
Sbjct: 201 EVSARGIRSQWRNSRNPQESWKYLDFIAPNLV-HYRFSLPNPD----WCAGLALYGISLG 255
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY 425
QG+S L+VR + W H S++ E D+ + SQ +++ K + ++LY
Sbjct: 256 QGRSRLLVRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
L+S D V E R+W D+ G PYY G+++ + +S LP
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTSQRTTAI-------------DLSDPLP-- 360
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSA 513
+RY RH +HC+ C +A
Sbjct: 361 -----------LDRYSRHTVHCRTCSAA 377
>gi|428311820|ref|YP_007122797.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428253432|gb|AFZ19391.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 447
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 226/436 (51%), Gaps = 45/436 (10%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQ 166
P +E+E +++W + WYP+ +D+P++ P +++D+ VL+++ +L C
Sbjct: 18 PLAEQEE-------EFNWRQCWYPVTFVQDLPENRPYSFSLYDEPFVLFRNQDKKLICLT 70
Query: 167 DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKE 226
DRCPHR AKLS+GQ++DG++ECLYHGWQF EG+C+ IPQLP DAKIP ACV++++V E
Sbjct: 71 DRCPHRAAKLSDGQILDGKIECLYHGWQFGSEGQCLHIPQLPTDAKIPIKACVQSFKVIE 130
Query: 227 SQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 286
QG++W+W + D++P +PGF I EL D S ++E+++DPAHI I+
Sbjct: 131 RQGMIWMWAGNAEAADEDRIPTIPKLGKPGFVYSDKITELSCDISYVIEHMLDPAHIHIA 190
Query: 287 HDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRES 344
H RE AQPL E+ E + GF G++ R D + N L F P +
Sbjct: 191 HHGN--QGNREKAQPLEMEIIESSVEGFRGRFRETRLPDQTWRN-LDFIVPSLAH----- 242
Query: 345 VDNKTGEKHYSTG-LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQD 403
+ EK + G F P G+G+ ++ R + +KL P W+ H +K+ E+D
Sbjct: 243 LHFPIPEKGWFFGQAFYFFPLGKGRCRILTRSYRNFVTLPVKLMPRWWIHLKQNKILEED 302
Query: 404 MGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
+ L Q + + + K++Y + + DT+ YR+W+D+ G +P+Y G++T KV
Sbjct: 303 LAQLLGQQQEVERLGQTIKQVYAPIETCDTFAIAYRQWVDRYGSSLPFYRGYTT---SKV 359
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLA--NRYFRHVIHCKGCRSAVKAFNTWK 521
E PNL R RH C C A + + K
Sbjct: 360 SQNTEDC----------------------QPNLMPIERSLRHTELCSSCHRAYQLSRSLK 397
Query: 522 NSLSTAAALLTALAIL 537
+ A L ALAI+
Sbjct: 398 QTFVVIAIFLAALAII 413
>gi|427730555|ref|YP_007076792.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427366474|gb|AFY49195.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 453
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 211/409 (51%), Gaps = 36/409 (8%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQ 180
D DW WYP+ +D+P + P ++++Q +VL++ G+L C D CPHR AKLS+GQ
Sbjct: 25 DLDWKNCWYPITFLQDLPKNRPYSFSLYNQSLVLFRTPDGKLGCLTDICPHRAAKLSDGQ 84
Query: 181 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 240
+IDGR+ECLYHGWQF +GKC+ IPQL DAKIP++ CV++Y V E QG+VW+W +
Sbjct: 85 IIDGRIECLYHGWQFGTDGKCLHIPQLAHDAKIPQNTCVKSYVVVEHQGIVWIWAGEAAA 144
Query: 241 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ ++P F P F + + E+PYD + +EN +DPAH+PI+H ++ R+DAQ
Sbjct: 145 VDEKRIPNLLEFDDPKFFSLDYVFEVPYDETYFIENALDPAHVPINHHGSE--MNRQDAQ 202
Query: 301 PLGFEVTERTDRGFAGQWGREKDGSMPNF----LRFEAPCVLQNNRESVDNKTGEKHYST 356
PL EV + G GR +D P+ L F AP + D H
Sbjct: 203 PLEIEVLATSITGIK---GRYRDTRTPDAKWVKLDFLAPNSVVYG--FYDLPKPGFHSGL 257
Query: 357 GLFLCRPTGQGKSMLIVRFGTT-GTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLL 415
L+L P + ++ RF T +L P W H ++V E+D + E +
Sbjct: 258 ALYLL-PKNPTQCRVLARFFQNFSTRRKNQLEPRWLSHLFRNRVVEEDRYMIKGVQEQVE 316
Query: 416 KEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLV 475
+ KELY L++ D V EYRKW+DK G +PYY G+ST S P + + E P+
Sbjct: 317 RSGQSLKELYLPLKTSDMLVIEYRKWLDKYGASLPYYQGYST-SKPHI-HMDESNPSS-- 372
Query: 476 AGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL 524
+L +R+ RH C C A + N K S
Sbjct: 373 -------------------SLGDRFERHTKICSSCYRAYQVTNLLKQSF 402
>gi|17232499|ref|NP_489047.1| hypothetical protein alr5007 [Nostoc sp. PCC 7120]
gi|17134145|dbj|BAB76706.1| alr5007 [Nostoc sp. PCC 7120]
Length = 450
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 221/443 (49%), Gaps = 37/443 (8%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQ 180
+++W WYP+ +D P + P +++D+ VL+++ G+L C D CPHR AKLS+GQ
Sbjct: 25 EFNWRHCWYPITFLQDFPKELPYSFSLYDEPFVLFRNQDGKLGCLPDICPHRAAKLSDGQ 84
Query: 181 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 240
+IDG++ECLYHGWQF +G+C+ IPQLP +A IP++ACV+++ + E QG+VW+W +
Sbjct: 85 IIDGKIECLYHGWQFGTDGQCLHIPQLPKEATIPKNACVQSFAIVERQGIVWMWAGEADA 144
Query: 241 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ +P +P F + +PYD + L+EN +DPAH+PISH+ T R +A
Sbjct: 145 ADETLIPAIPELDKPEFVTTDFMCNIPYDQNTLIENAIDPAHVPISHNGT--LGNRAEAL 202
Query: 301 PLGFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNN---RESVDNKTGEKHYST 356
PL E+ ++ +G G++ P + F AP ++ E G YS
Sbjct: 203 PLEMEIIAKSVQGICGRYRNVSSSLSPWININFVAPNLVMLYIPINEERGWYRGAAAYSI 262
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLK 416
P G+ + ++ R + +KL P W H KV +QDM + Q + + +
Sbjct: 263 ------PLGKNQCRVLFRAFQNFSQWRLKLTPRWLEHWYRQKVLQQDMQQAAGQQKHIER 316
Query: 417 EKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVA 476
+ELY L++ D + EYRKW+DK G +P+Y G++T +V
Sbjct: 317 LIKSPRELYLPLKTSDLFPVEYRKWLDKYGSSLPFYQGYTTCKTNYEQKIV--------- 367
Query: 477 GVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAI 536
+ + +R+ H C C A + K+ L + A L A AI
Sbjct: 368 ----------------SLSTNDRFESHTQICSSCDRAYRVTKLVKHILVSVAITLAAFAI 411
Query: 537 LGAGRQWRAFCLVSASLCLAGVY 559
L + +V++ L + V+
Sbjct: 412 LTDDSWISSVAVVTSLLAVILVF 434
>gi|254413280|ref|ZP_05027051.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196179900|gb|EDX74893.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 449
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 218/448 (48%), Gaps = 38/448 (8%)
Query: 93 SAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQI 152
+ P D P SE E E ++W WYP+ +D D P G +++D+
Sbjct: 2 TVAPHKPDSAQSTNPLSEPELESE-----FNWRNCWYPICFRQDFAKDRPYGFSLYDEPF 56
Query: 153 VLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAK 212
V++K + EL C DRCPHR AKLS+GQLIDG+LECLYHGWQF EG+C+ IPQL AD
Sbjct: 57 VIFKH-QEELICLTDRCPHRAAKLSDGQLIDGKLECLYHGWQFGHEGQCLHIPQLSADGT 115
Query: 213 IPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSI 272
IP +A VR+++V E QG++W+W + +P +PGF + E+P D S
Sbjct: 116 IPVNANVRSHKVVERQGLIWIWPGAAELADEQAIPTIPQLDQPGFVHSDKLTEVPCDISY 175
Query: 273 LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFL 330
+LE+++DPAHI I+H R AQPL E+ E + GF GQ RE + + F
Sbjct: 176 VLEHMLDPAHIHITHHGN--QGDRAKAQPLEMEILESSVNGFRGQSRNTREPNSTWIKF- 232
Query: 331 RFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDW 390
F AP L + S+ +K + F P +GK ++ R + +KL P W
Sbjct: 233 DFIAPS-LAHFYFSIPDKDW---FFGQAFYLFPLSKGKCRILSRTYRNFVTQPVKLMPRW 288
Query: 391 YFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMP 450
+ H +K+ QD+ L Q + + P K++Y + + DT+ EYRKW+D+ G +P
Sbjct: 289 WTHLKQNKILAQDISILLGQQHEVERLGEPVKQVYSPIPTCDTFAMEYRKWLDRVGASLP 348
Query: 451 YYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGC 510
YY G+ T E+ P G + +S F H C C
Sbjct: 349 YYRGYLT------SKDRENEPEGQLNKMS-----------------VKPLFWHTELCHSC 385
Query: 511 RSAVKAFNTWKNSLSTAAALLTALAILG 538
A + + A + ALAIL
Sbjct: 386 NRAYQISQRVEQLGVGVAIVFAALAILA 413
>gi|388510972|gb|AFK43552.1| unknown [Medicago truncatula]
Length = 197
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 115/137 (83%), Gaps = 2/137 (1%)
Query: 86 AVTDMSSSAV--PTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPL 143
A D+ ++++ +D KVLVGP+SE+E RGER +A YDW EEWYPLYLTK+VPDDAPL
Sbjct: 58 ATADVKTASILLDVEEDQKVLVGPSSEQERRGERELAAYDWKEEWYPLYLTKNVPDDAPL 117
Query: 144 GLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVK 203
GLTVFD+ +VL+KDG + +C++DRCPHRLAKLSEGQLIDGRL CLYHGWQFEGEGKCVK
Sbjct: 118 GLTVFDKNLVLFKDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLGCLYHGWQFEGEGKCVK 177
Query: 204 IPQLPADAKIPRSACVR 220
IPQLPADAKIP ++
Sbjct: 178 IPQLPADAKIPGQPVLK 194
>gi|361066713|gb|AEW07668.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
Length = 143
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Query: 303 GFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCR 362
GFEVTERT RGFAG+WG + + N LRFEAPCVL+N++E VD K G K YS+ LFLCR
Sbjct: 1 GFEVTERTPRGFAGRWGEASNATFANTLRFEAPCVLRNDKEYVD-KDGNKKYSSALFLCR 59
Query: 363 PTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTK 422
P+GQGKSMLIVRFG+T + L P+W HQ++++VFEQDMGFLSSQNE+LL++KVPTK
Sbjct: 60 PSGQGKSMLIVRFGSTQINSRFTLIPNWVIHQTSNRVFEQDMGFLSSQNEILLRKKVPTK 119
Query: 423 ELYFNLRSIDTWVAEYRKWMDKAG 446
+LY NLRS DTWV EYR+W+DK G
Sbjct: 120 DLYLNLRSCDTWVTEYRRWLDKVG 143
>gi|383163898|gb|AFG64694.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163899|gb|AFG64695.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163900|gb|AFG64696.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163902|gb|AFG64697.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163903|gb|AFG64698.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163904|gb|AFG64699.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163905|gb|AFG64700.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163906|gb|AFG64701.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163907|gb|AFG64702.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163908|gb|AFG64703.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163909|gb|AFG64704.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163911|gb|AFG64705.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163912|gb|AFG64706.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
Length = 143
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 118/144 (81%), Gaps = 1/144 (0%)
Query: 303 GFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCR 362
GFEVTERT RGFAG+WG + + N LRFEAPCVL+N++E VD K G K+YS+ LFLCR
Sbjct: 1 GFEVTERTPRGFAGRWGEASNATFANTLRFEAPCVLRNDKEYVD-KDGNKNYSSALFLCR 59
Query: 363 PTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTK 422
P+GQGKSMLIVRFG+T + L P+W HQ++++VFEQDMGFLSSQNE+LL++KVPTK
Sbjct: 60 PSGQGKSMLIVRFGSTQFNSRFTLIPNWVIHQTSNRVFEQDMGFLSSQNEILLRKKVPTK 119
Query: 423 ELYFNLRSIDTWVAEYRKWMDKAG 446
+LY NLRS DTWV EYR+W+DK G
Sbjct: 120 DLYLNLRSCDTWVTEYRRWLDKVG 143
>gi|145353812|ref|XP_001421195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581432|gb|ABO99488.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 492
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 193/431 (44%), Gaps = 56/431 (12%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLA 174
E R YDW WYP DV DAPL T+ + +V ++D GE+RC DRCPHRL
Sbjct: 23 AEARAEAYDWRAHWYPAAYVADVEKDAPLTFTLLGEPLVFWRDKSGEMRCVADRCPHRLV 82
Query: 175 KLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ------LPADAKIPRSACVRTYEVKES 227
LSEG++ + G LEC YHGW F GEGKC IPQ L K PRS CV Y KE+
Sbjct: 83 PLSEGRVNETGELECGYHGWTFTGEGKCTSIPQIEQGTGLETALKSPRS-CVAAYPTKEA 141
Query: 228 QGVVWVWMS--QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 285
QG++WV+ + K P LP + P +LP D + LLEN+MD +H+P
Sbjct: 142 QGMLWVYPTSMDKAPATLPDLPLIPEYDDPECVCQDIFRDLPMDWATLLENVMDVSHVPF 201
Query: 286 SHDRTDYSAKREDAQPLGFEVTER---TDRGFAGQW--GREKDGSMPNFLRFEAPCVLQN 340
+H + KRE+A P+ E+ T GF G W G K + F+AP ++++
Sbjct: 202 THHNS--VGKRENATPVNLELASAAGVTANGFEGIWKEGPRKGKYGSQYTEFKAPTLMRH 259
Query: 341 NRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSA 396
++ E + + PT G+ L+ RF S + L+P W+ H +
Sbjct: 260 TLKT------EAFTTLTVVYAVPTTPGRCRLMARFPFIFKSALPRFFFGLYPQWFSHTNQ 313
Query: 397 SKVFEQDMGFLSSQN---EVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYF 453
+ + E D FL Q EV KE + + D +V+ +RKW+ G P +
Sbjct: 314 NAILEDDQIFLHKQERLIEVEQKEGKSYAQSCYMPTKADVYVSAFRKWIVDVAGGGPAWP 373
Query: 454 GHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSA 513
LP E L +RY H I+CK C SA
Sbjct: 374 KDMPTDLPPQETTRE--------------------------ALLDRYHSHTINCKSCASA 407
Query: 514 VKAFNTWKNSL 524
+ + +L
Sbjct: 408 LAKIGKARKAL 418
>gi|351726806|ref|NP_001236883.1| lethal leaf spot 1-like protein [Glycine max]
gi|76162840|gb|ABA40832.1| lethal leaf spot 1-like protein [Glycine max]
Length = 563
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 259/558 (46%), Gaps = 96/558 (17%)
Query: 49 KLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMSSSAVPTP----DDHKVL 104
K+ P PFF S K L K+T P+ + ++T +A P+ +
Sbjct: 43 KVNPFPFF---------SNQKTRFLTKQTRPRSRRSLSLTPARVAAPPSTVEADQSYPET 93
Query: 105 VGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELR 163
+EEE E + + W + WYP+ L +D+ P + ++IVL+ D +
Sbjct: 94 ENNETEEEFNDESSYSKFTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWV 153
Query: 164 CHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----A 217
D+CPHRLA LSEG++ DG+L+C YHGW F+G G CVKIPQ ++ R+ A
Sbjct: 154 AFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAIGSPKA 213
Query: 218 CVRTYEVKESQGVVWVW-----MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSI 272
C + SQG+++VW + P LP ++F +P F V+ +L Y +
Sbjct: 214 CATRFPTMVSQGLLFVWPDENGWEKAKASKPPMLP--DDFDKPEFATVNIQRDLFYGYDT 271
Query: 273 LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRF 332
L+EN+ DP+HI +H + + +R+ A+PL F++ R GF+G +G+ +F
Sbjct: 272 LMENVSDPSHIEFAHHKV--TGRRDRAKPLPFKMDSRGSWGFSG----ANEGNPQISAKF 325
Query: 333 EAPCVLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTG 379
APC + N + +D K G++ + +++C P GK+ IV +F G
Sbjct: 326 VAPCYMMNKIQ-IDTKLPVVGDQKWV--VWICSFNVPMAPGKTRSIVCSARNFFQFSVPG 382
Query: 380 TSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE----------LYFNLR 429
+ W ++ P WY H +++KV++ DM L Q ++ L E TKE + F
Sbjct: 383 PA-WWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSE---TKEGGDINKQYTNITFTPT 438
Query: 430 SIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIG 489
D +V +R W+ + G+G P +FG+S S +P+ V
Sbjct: 439 QADRFVLAFRNWLRRHGNGQPEWFGNS--SDQPLPSTV---------------------- 474
Query: 490 TMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLV 549
+ + +R+ +H + C C++A + F TW+ L + A + + + Q R
Sbjct: 475 -LSKRQMLDRFEQHTLKCSSCKAAYEGFQTWQKVLIGTTVVFCATSGIPSDVQLRVL--- 530
Query: 550 SASLCLAGVYACSTAISM 567
LAG+ S AI+
Sbjct: 531 -----LAGLAIVSAAITF 543
>gi|356539354|ref|XP_003538163.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 545
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 257/560 (45%), Gaps = 83/560 (14%)
Query: 43 LKIPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMSSSAVPTPDDHK 102
L + SP KP P + N S + R R+ L+ A S V +
Sbjct: 14 LTLSSPITKPHKVNPFPFSSNRNSQFLTKQTRPRSRRNLSLTPARVAAPPSTVEADRLYP 73
Query: 103 VLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GE 161
+EEE E + + W + WYP+ L +D+ P + ++IVL+ D +
Sbjct: 74 EAENNETEEEFSDESSSSKFTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQ 133
Query: 162 LRCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS---- 216
D+CPHRLA LSEG++ DG+L+C YHGW F+G G CVKIPQ ++ R+
Sbjct: 134 WVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQASSEGPEARAIGSP 193
Query: 217 -ACVRTYEVKESQGVVWVW-----MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDH 270
AC + SQG+++VW + P LP ++F +P F V+ +L Y +
Sbjct: 194 KACATRFPTLVSQGLLFVWPDENGWEKAKASKPPMLP--DDFDKPEFATVNIQRDLFYGY 251
Query: 271 SILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL 330
L+EN+ DP+HI +H + + +R+ A+PL F++ R GF+G +G+
Sbjct: 252 DTLMENVSDPSHIEFAHHKV--TGRRDRAKPLPFKMDSRGSWGFSG----ANEGNPQISA 305
Query: 331 RFEAPCVLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGT 377
+F APC + N E +D K G++ + +++C P GK+ IV +F
Sbjct: 306 KFVAPCYMMNKIE-IDTKLPVVGDQKWV--VWICSFNVPMAPGKTRSIVCSARNFFQFSV 362
Query: 378 TGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE----------LYFN 427
G + W ++ P WY H +++KV++ DM L Q ++ L E TKE + F
Sbjct: 363 PGPA-WWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSE---TKEGGDINKQYTNITFT 418
Query: 428 LRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGG 487
D +V +R W+ + G+G P +FG+S+ LP+
Sbjct: 419 PTQADRFVLAFRNWLRRHGNGQPEWFGNSS---------------------DQPLPST-- 455
Query: 488 IGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFC 547
+ + +R+ +H + C C++A + F TW+ L A + A + + + Q R
Sbjct: 456 --VLSKRQMLDRFEQHTLKCSSCKAAYEGFQTWQKVLIGATVVFCATSGIPSDFQLR--- 510
Query: 548 LVSASLCLAGVYACSTAISM 567
+ LAG+ S AI+
Sbjct: 511 -----VLLAGLAVVSAAIAF 525
>gi|168033321|ref|XP_001769164.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679590|gb|EDQ66036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 222/491 (45%), Gaps = 66/491 (13%)
Query: 111 EESRGERRVAD--YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDR 168
EE + E+ +D + W + WYP+ L +D+ P + +++V++KD +GE R D+
Sbjct: 22 EEQQPEQGQSDDAFVWRDHWYPVSLIEDLDPSVPTPFQLLGRELVVWKDPQGEWRVFLDK 81
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD-----AKIPRSACVRTY 222
CPHRLA LSEG+L + G L+C YHGW F+G+G C IPQ A AK AC +Y
Sbjct: 82 CPHRLAPLSEGRLDESGMLQCSYHGWAFKGDGSCSAIPQAAASGPESKAKFSPRACAVSY 141
Query: 223 EVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 277
+ SQG+++VW +K +P LP F+ P + V+ +L Y + L+EN+
Sbjct: 142 PTQVSQGLLFVWPDEKGWEKAAQASPPMLP--PEFSDPKYSTVTIQRDLYYGYDTLMENV 199
Query: 278 MDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPC 336
DP+HI +H + + +R+ A+PL F+V + GFAG + P F PC
Sbjct: 200 SDPSHIDFAHHKV--TGRRDRAKPLPFKVHKSGPWGFAG-----ANNDTPTISTGFYPPC 252
Query: 337 VLQNNRESVDNKTGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKL 386
N E + +C P GK+ IV +F T G W +L
Sbjct: 253 YYYNKIELPVKLPILGDQKWEILICSFNIPMAPGKTRSIVCSARNFFQFLTPGDK-WWQL 311
Query: 387 FPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY----FNLRSIDTWVAEYRKWM 442
P WY H +++KV++ DM L Q ++ L Y F D +V +R W+
Sbjct: 312 VPRWYEHWTSNKVYDGDMIVLQGQEKIFLAHDGDINAQYGKLTFTPTQADRFVLAFRNWL 371
Query: 443 DKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFR 502
+ G G P +F + P +P+ V + + +RY +
Sbjct: 372 RRHGKGGPEWFPEARTDRP-LPSTV-----------------------LSKRQMLDRYEQ 407
Query: 503 HVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACS 562
H ++C CR+A K F W+ + +L A A + A RA + L A Y
Sbjct: 408 HTLNCSSCRNAQKYFQLWQKIFWGSTIVLAAAAGVPADMVIRALLASGSVLSAAAAY--- 464
Query: 563 TAISMNTTNFI 573
+ NFI
Sbjct: 465 -TLKEGEKNFI 474
>gi|302794127|ref|XP_002978828.1| hypothetical protein SELMODRAFT_177205 [Selaginella moellendorffii]
gi|300153637|gb|EFJ20275.1| hypothetical protein SELMODRAFT_177205 [Selaginella moellendorffii]
Length = 547
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/497 (29%), Positives = 228/497 (45%), Gaps = 83/497 (16%)
Query: 68 IKAHK------LRKRTEPKLTKCHAVTDMS--SSAVPTPDDHKVLVGPASEEESRGERRV 119
IKA K +R K+T A+T + SS+ D+ + L E + + +++
Sbjct: 29 IKARKTIGFVSFSRRRRGKITVTGAITSSAPGSSSTVKEDEQQFLQQSLGESQDKEDKK- 87
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
+ WTE WYP+ L +D+ A + ++IV++KDG+G R D+CPHRLA LSEG
Sbjct: 88 --FSWTEHWYPVSLVEDLDPKAATPFKLLGREIVVWKDGEGNWRAFSDQCPHRLAPLSEG 145
Query: 180 QLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-------ACVRTYEVKESQGVV 231
++ +G L+C YHGW F+G+G C KIPQ A + P S AC T+ SQG++
Sbjct: 146 RIDENGWLQCSYHGWSFKGDGSCGKIPQ--AATQGPESKAVASPRACAITFPAVVSQGLL 203
Query: 232 WVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 286
+VW +K P +LP F P F V+ +L Y + L+EN+ DP+HI +
Sbjct: 204 FVWPDEKGWESAQRTQPPQLP--AVFDDPSFSTVTIQRDLFYGYDTLMENVSDPSHIDFA 261
Query: 287 HDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL-RFEAPCVLQNNRESV 345
H + + KR+ A+PL F+V R GF+G + P F APC N E
Sbjct: 262 HHKV--TGKRDRAKPLTFKVDSRGPWGFSG-----ANSDTPKITAEFLAPCYYINKIEIP 314
Query: 346 DNKTGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPW---------IKL 386
+ + +++C P G++ IV F G + W + L
Sbjct: 315 LTLPLQGPKTWEIWICSFNVPMAPGQTRSIVCSARNFFTFLMPGPAWWQASSASFLYLSL 374
Query: 387 FPDWYFHQSASKVFEQDMGFLSSQNEVLLKE----KVPTKELYFNLRSIDTWVAEYRKWM 442
P W+ H +++KV++ DM L Q + L ++ F D +V E+R W+
Sbjct: 375 VPRWHEHWTSNKVYDGDMIVLQGQEKKFLATGGDINAKYSQITFTPTQADRFVLEFRNWL 434
Query: 443 DKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFR 502
K G+G P + AG S + P + + + +RY +
Sbjct: 435 RKHGNGEPKW----------------------AAGTSKTQPLPSTV--LSKQQMLDRYQQ 470
Query: 503 HVIHCKGCRSAVKAFNT 519
H ++C CR+A KAF
Sbjct: 471 HTLNCSSCRNAFKAFKV 487
>gi|302787751|ref|XP_002975645.1| hypothetical protein SELMODRAFT_174928 [Selaginella moellendorffii]
gi|300156646|gb|EFJ23274.1| hypothetical protein SELMODRAFT_174928 [Selaginella moellendorffii]
Length = 547
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 228/497 (45%), Gaps = 83/497 (16%)
Query: 68 IKAHK------LRKRTEPKLTKCHAVTDMS--SSAVPTPDDHKVLVGPASEEESRGERRV 119
IKA K +R K+T A+T + SS+ D+ + L E + + +++
Sbjct: 29 IKARKTIGFVSFSRRRRGKITVTGAITSSAPGSSSTVKEDEQQFLQQSLGESQDKEDKK- 87
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
+ WTE WYP+ L +D+ A + ++IV++KDG+G R D+CPHRLA LSEG
Sbjct: 88 --FSWTEHWYPVSLVEDLDPKAATPFKLLGREIVVWKDGEGNWRAFSDQCPHRLAPLSEG 145
Query: 180 QLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-------ACVRTYEVKESQGVV 231
++ +G L+C YHGW F+G+G C KIPQ A + P S AC ++ SQG++
Sbjct: 146 RIDENGWLQCSYHGWSFKGDGSCGKIPQ--AATQGPESKAVASPRACAISFPAVVSQGLL 203
Query: 232 WVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 286
+VW +K P +LP F P F V+ +L Y + L+EN+ DP+HI +
Sbjct: 204 FVWPDEKGWESAQRTQPPQLP--AVFDDPSFSTVTIQRDLFYGYDTLMENVSDPSHIDFA 261
Query: 287 HDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL-RFEAPCVLQNNRESV 345
H + + KR+ A+PL F+V R GF+G + P F APC N E
Sbjct: 262 HHKV--TGKRDRAKPLTFKVDSRGPWGFSG-----ANSDTPKITAEFLAPCYYINKIEIP 314
Query: 346 DNKTGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPW---------IKL 386
+ + +++C P G++ IV F G + W + L
Sbjct: 315 VTLPLQGPKTWEIWICSFNVPMAPGQTRSIVCSARNFFTFLMPGPAWWQASSASFLYLSL 374
Query: 387 FPDWYFHQSASKVFEQDMGFLSSQNEVLLKE----KVPTKELYFNLRSIDTWVAEYRKWM 442
P W+ H +++KV++ DM L Q + L ++ F D +V E+R W+
Sbjct: 375 VPRWHEHWTSNKVYDGDMIVLQGQEKKFLATGGDINAKYSQITFTPTQADRFVLEFRNWL 434
Query: 443 DKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFR 502
K G+G P + AG S + P + + + +RY +
Sbjct: 435 RKHGNGEPKW----------------------AAGTSKTQPLPSTV--LSKQQMLDRYQQ 470
Query: 503 HVIHCKGCRSAVKAFNT 519
H ++C CR+A KAF
Sbjct: 471 HTLNCSSCRNAFKAFKV 487
>gi|449443371|ref|XP_004139451.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Cucumis
sativus]
Length = 545
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 217/454 (47%), Gaps = 68/454 (14%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ P + + IV++ D +GE DRCPHRLA LSEG+
Sbjct: 94 FSWRDNWYPVSLIEDLDPALPTPFQLLGRDIVIWFDKSRGEWVAFDDRCPHRLAPLSEGR 153
Query: 181 LIDG-RLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW 234
+ +G L+C YHGW F+G G CVKIPQ ++ R+ AC + SQG+++VW
Sbjct: 154 IDEGGNLQCSYHGWSFDGCGSCVKIPQASSEGPESRAHQSPRACATRFPTLVSQGLLFVW 213
Query: 235 MSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ P +LP ++F +P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 214 PDENGWERANATTPPRLP--DDFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHK 271
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK- 348
+ +R+ A+PL F++ GF+G G+ F APC N E +D+K
Sbjct: 272 V--TGRRDRAKPLPFKLDTNGPWGFSG----ANKGNPRISAEFVAPCYYINKVE-IDSKL 324
Query: 349 --TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSA 396
G++ + +++C P G GK+ IV +F G + W ++ P W+ H ++
Sbjct: 325 PLLGDQKWV--IWICSFNVPMGPGKTRSIVCSARNFFQFSMPGPA-WWQVVPRWHEHWTS 381
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTK------ELYFNLRSIDTWVAEYRKWMDKAGHGMP 450
+KV++ DM L Q ++ L + T ++ F D V +R W+ + G G P
Sbjct: 382 NKVYDGDMIVLQGQEKIFLSMEGSTDVNKEYTKITFTPTQADRLVLAFRNWLRRHGKGQP 441
Query: 451 YYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGC 510
+FG S S +P+ V + + +R+ +H +HC C
Sbjct: 442 EWFGAS--SQQPLPSTV-----------------------LSKRQMLDRFEQHTLHCSSC 476
Query: 511 RSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR 544
+ A K F T + L A + A A + + Q R
Sbjct: 477 KGAYKTFQTVQRLLIGATVVFAATAGIPSALQIR 510
>gi|449524120|ref|XP_004169071.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Cucumis
sativus]
Length = 545
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 217/454 (47%), Gaps = 68/454 (14%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ P + + IV++ D +GE DRCPHRLA LSEG+
Sbjct: 94 FSWRDNWYPVSLIEDLDPALPTPFQLLGRDIVIWFDKSRGEWVAFDDRCPHRLAPLSEGR 153
Query: 181 LIDG-RLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW 234
+ +G L+C YHGW F+G G CVKIPQ ++ R+ AC + SQG+++VW
Sbjct: 154 IDEGGNLQCSYHGWSFDGCGSCVKIPQASSEGPESRAHQSPRACATRFPTLVSQGLLFVW 213
Query: 235 MSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ P +LP ++F +P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 214 PDENGWERANATTPPRLP--DDFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHK 271
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK- 348
+ +R+ A+PL F++ GF+G G+ F APC N E +D+K
Sbjct: 272 V--TGRRDRAKPLPFKLDTNGPWGFSG----ANKGNPRISAEFVAPCYYINKVE-IDSKL 324
Query: 349 --TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSA 396
G++ + +++C P G GK+ IV +F G + W ++ P W+ H ++
Sbjct: 325 PLLGDQKWV--IWICSFNVPMGPGKTRSIVCSARNFFQFSMPGPA-WWQVVPRWHEHWTS 381
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTK------ELYFNLRSIDTWVAEYRKWMDKAGHGMP 450
+KV++ DM L Q ++ L + T ++ F D V +R W+ + G G P
Sbjct: 382 NKVYDGDMIVLQGQEKIFLSMEGSTDVNKEYTKITFTPTQADRLVLAFRNWLRRHGKGQP 441
Query: 451 YYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGC 510
+FG S S +P+ V + + +R+ +H +HC C
Sbjct: 442 EWFGAS--SQQPLPSTV-----------------------LSKRQMLDRFEQHTLHCSSC 476
Query: 511 RSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR 544
+ A K F T + L A + A A + + Q R
Sbjct: 477 KGAYKTFQTVQRLLIGATVVFAATAGIPSALQIR 510
>gi|357472079|ref|XP_003606324.1| Pheophorbide A oxygenase [Medicago truncatula]
gi|355507379|gb|AES88521.1| Pheophorbide A oxygenase [Medicago truncatula]
Length = 542
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 214/454 (47%), Gaps = 67/454 (14%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ P + ++IV++ D + D+CPHRLA LSEG+
Sbjct: 90 FSWRDHWYPVSLIEDLDSSLPTPFQLLGREIVIWFDKANSQWVAFDDKCPHRLAPLSEGR 149
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW 234
+ + G L+C YHGW F+G G C IPQ + R+ AC + SQG+++VW
Sbjct: 150 IDESGNLQCSYHGWSFDGRGGCTVIPQASPEGPEARAVGSPRACATRFPTLVSQGLLFVW 209
Query: 235 -----MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ P LP ++F +P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 210 PDENGWEKANASKPPMLP--DDFVKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHK 267
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK- 348
+ +R+ A+PL F++ R GF+G +G+ +F APC N E +D K
Sbjct: 268 V--TGRRDRAKPLPFKMDSRGSWGFSG----ANEGNPRISSKFIAPCYYINKVE-IDTKL 320
Query: 349 --TGEKHYSTGLFLCR---PTGQGKSMLIV-----RFGTTGTSP-WIKLFPDWYFHQSAS 397
G++ + +++C P GK+ IV F T P W ++ P WY H +++
Sbjct: 321 PVVGDQKWV--IWICSFNVPMAPGKTRSIVCSARNFFQLTVPGPAWWQVVPRWYEHWTSN 378
Query: 398 KVFEQDMGFLSSQNEVLLKEKVPTKE-------LYFNLRSIDTWVAEYRKWMDKAGHGMP 450
KV++ DM L Q ++ L E + L F D +V +R W+ + G+G P
Sbjct: 379 KVYDGDMIVLQGQEKIFLAETENGGDINKQYTSLTFTPTQADRFVLAFRNWLRRHGNGQP 438
Query: 451 YYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGC 510
+FG S+ S LP+ + + +R+ +H + C C
Sbjct: 439 EWFGKSS---------------------SQPLPST----VLSKRQMLDRFEQHTLKCSAC 473
Query: 511 RSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR 544
+ A + F TW+ L+ A + A + + + Q R
Sbjct: 474 KGAYEGFQTWQKILTGATVVFCATSGIPSDTQLR 507
>gi|357120753|ref|XP_003562089.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 524
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 241/534 (45%), Gaps = 79/534 (14%)
Query: 45 IPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMSSSAVPT-PDDHKV 103
+ SP L SP +PP ++ + A +R L + A T + +A P+ P + +
Sbjct: 1 MASPSLFLSP--SPPLHRPLLPSLPARPASRRN--GLRRARAGTRLRVAAPPSVPGEAER 56
Query: 104 LVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGEL 162
P++ GER V W + WYP+ L +D+ P + ++ +V++KD GE
Sbjct: 57 TEEPSTSSPESGERFV----WRDHWYPVSLVEDLDPRVPTPFQLLNRDLVIWKDPNSGEW 112
Query: 163 RCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS----- 216
DRCPHRLA LSEG++ + G L+C YHGW F+G G C KIPQ + R+
Sbjct: 113 AALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTKIPQAAPEGPEARAVRSPR 172
Query: 217 ACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHS 271
AC + SQG+++VW + P LP E F P F V+ +L Y +
Sbjct: 173 ACAIKFPTLVSQGLLFVWPDENGWEKAKATKPPMLP--EEFNDPAFSTVTIQRDLFYGYD 230
Query: 272 ILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLR 331
L+EN+ DP+HI +H + + +R+ A+PL F++ G++G G+
Sbjct: 231 TLMENVSDPSHIEFAHHKV--TGRRDRARPLTFKMESSGAWGYSG----ANSGNPRITAT 284
Query: 332 FEAPCVLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTT 378
FEAPC N E +D K G++ + +++C P GK+ IV +F
Sbjct: 285 FEAPCYALNKIE-IDTKLPILGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFTMP 341
Query: 379 GTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTK--------ELYFNLRS 430
G + W + P WY H +++ V++ DM L Q +V L + +L F
Sbjct: 342 GKA-WWQFIPRWYEHWTSNLVYDGDMIVLQGQEKVFLSASKESSADVNQQYTKLTFTPTQ 400
Query: 431 IDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGT 490
D +V +R W+ K G+ P +FG + S +P+ V
Sbjct: 401 ADRFVLAFRAWLRKFGNSQPDWFG--SPSQEALPSTV----------------------- 435
Query: 491 MHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR 544
+ + +RY +H + C C+ A +F T + A A A + A Q+R
Sbjct: 436 LSKREMLDRYEQHTLKCSSCKGAYNSFQTLQKVFMGATVAFGATAGIPAEVQFR 489
>gi|116787254|gb|ABK24432.1| unknown [Picea sitchensis]
Length = 544
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 237/524 (45%), Gaps = 74/524 (14%)
Query: 69 KAHKLRKRTEPKLTKCHAVTDMSSSAVPTPDDHKVLVGPASEEE----SRGERRVADYDW 124
K +R+R + T+ + +S++ P V+ G +S EE E + W
Sbjct: 39 KERSIRRRRKNFATRRRDLHVVSATVAP-----PVIPGSSSAEEYDKGREAEEESGKFLW 93
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID- 183
+ WYP+ L +D+ P + + IVL++D +G + +D+CPHRLA LSEG+L +
Sbjct: 94 RDHWYPVSLIEDLDPKIPTPFQLLGRDIVLWQDAEGNWKAFEDKCPHRLAPLSEGRLDEN 153
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVWMSQK 238
G L+C YHGW F+ +G C +IPQ ++ R+ AC ++ SQG+++VW +K
Sbjct: 154 GWLQCSYHGWSFKADGSCARIPQAASEGPEARAVGSPRACAVSFPTTVSQGLLFVWPDEK 213
Query: 239 -----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS 293
+ P LP + F+ P F V+ +L Y + L+EN+ DP+HI +H + +
Sbjct: 214 GWERASKFKPPLLP--DEFSDPRFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKV--T 269
Query: 294 AKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNNRESVDNKTGEK 352
+R+ A+PL F+V GF+G + P F APC N E
Sbjct: 270 GRRDRAKPLTFKVDSSGPWGFSGS-----NSETPKISASFIAPCYYINKIELPVKLPLLG 324
Query: 353 HYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSASKVFEQ 402
+ +++C P GK+ IV RF G + W +L P W+ H +++KV++
Sbjct: 325 EQTWEIWICSFNTPMLPGKTRSIVCSARNFFRFTMPGPA-WWQLVPRWHEHWTSNKVYDG 383
Query: 403 DMGFLSSQNEVLLKE--------KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFG 454
DM L Q + L L F D +V +R W+ + G+G P + G
Sbjct: 384 DMIVLQGQEKTFLANTSTGDFDVNRDYSTLTFTPTQADRFVLAFRNWLRRYGNGQPEWLG 443
Query: 455 HSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAV 514
+T P +P+ V + + +RY +H + C C+ A
Sbjct: 444 PNTSGQP-LPSTV-----------------------LSKREMLDRYEQHTLKCSSCKKAH 479
Query: 515 KAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGV 558
++F + L A + A A + + R L SA++ AGV
Sbjct: 480 QSFQQLQKFLLGATLVFAASAGIPPEMKLR-IILASAAVVTAGV 522
>gi|449452682|ref|XP_004144088.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 546
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 147/488 (30%), Positives = 211/488 (43%), Gaps = 82/488 (16%)
Query: 114 RGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHR 172
R E +DW EWYP+ D+ P+G V +V++ D + + D CPHR
Sbjct: 75 RPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHR 134
Query: 173 LAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQ 228
LA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV Y
Sbjct: 135 LAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQN 194
Query: 229 GVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 283
G++W W P D + P+ P + + ++ Y + IL+ENLMDPAH+
Sbjct: 195 GILWFW-PNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHV 253
Query: 284 PISHDRT----DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV-- 337
P +H + +A RE +PL V + GF G+ R + +F APCV
Sbjct: 254 PYAHYKIIPAPPATADREGGRPLELVVEKLKADGFVGRHERLRH-------KFFAPCVYY 306
Query: 338 -------LQNNRESVDNKTGEKHYSTG--------------LFLCRPTGQGKSMLIVRFG 376
+Q N ES K E ST +F C P GKS LI F
Sbjct: 307 FFTDPELVQGNVES-STKNDEAVSSTANKPPTEISQRRSFLVFFCIPVSPGKSRLIWAFP 365
Query: 377 TTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT---KELYFNLRSIDT 433
+ P W FH + + + DM FL + E +E P+ K Y ++S D
Sbjct: 366 RNFGKWMNYIVPRWMFHIGQNLILDSDMYFLRVE-EHKYEEIGPSNWHKACYVPVKS-DA 423
Query: 434 WVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHA 493
+V +R+W++K G + G + SLP +P +
Sbjct: 424 FVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQ------------------------- 458
Query: 494 PNLANRYFRHVIHCKGCRSAVKAFNTWKNSL-STAAALLTALAILGAG---RQWRAFCLV 549
+ RY+ HV++CK C A KA N + SL + + A + ALA++ G RA +
Sbjct: 459 --VFERYWSHVVNCKSCNGAYKALNIAEVSLQAISMAAIGALALIKHGVLSATVRATIVT 516
Query: 550 SASLCLAG 557
A LC A
Sbjct: 517 VAILCFAA 524
>gi|30088964|gb|AAP13565.1| lethal leaf spot 1-like protein [Vigna unguiculata]
Length = 545
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 220/467 (47%), Gaps = 69/467 (14%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ W + WYP+ L +D+ P + ++IV + D+CPHRLA LSEG++
Sbjct: 95 FTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVRTTSPLPKWVAFDDKCPHRLAPLSEGRI 154
Query: 182 I-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVWM 235
DG+L+C YHGW F+G G CVKIPQ ++ R+ AC + SQG+++VW
Sbjct: 155 DEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAVGSPKACATRFPTLVSQGLLFVWP 214
Query: 236 SQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+ + P LP + F +P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 215 DENGWEKASASKPPMLP--DEFEKPEFATVNIQRDLFYGYDTLMENVSDPSHIEFAHHKV 272
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK-- 348
+ +R+ A+PL F++ R GF+G +G+ +F APC N E +D K
Sbjct: 273 --TGRRDRAKPLPFKMDARGSWGFSG----ANEGNPKISAKFVAPCYYMNKIE-IDTKLP 325
Query: 349 -TGEKHYSTGLFLCR---PTGQGKSMLIVR----FGTTGTSP-WIKLFPDWYFHQSASKV 399
G++ + +++C P GK+ I F T P W ++ P WY H +++KV
Sbjct: 326 VVGDQKWV--VWICSFNVPMAPGKTRSIFSARNFFQFTVPGPAWWQVVPRWYEHWTSNKV 383
Query: 400 FEQDMGFLSSQNEVLLKEKVPTKELYFNLRSI-------DTWVAEYRKWMDKAGHGMPYY 452
++ DM L Q ++ L + ++ SI D +V +R W+ + G+G P +
Sbjct: 384 YDGDMIVLQGQEKIFLSKTKEGDDINKQYTSITFTPTQADRFVLAFRNWLRRHGNGQPEW 443
Query: 453 FGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRS 512
F S+P +P LP+ + + +R +H + C C+
Sbjct: 444 FS----SIPDLP-----------------LPST----VLSKREMLDRLEQHTLKCSSCKE 478
Query: 513 AVKAFNTWKNSLSTAAALLTALAILGAGRQWR----AFCLVSASLCL 555
A + F W+ L A + A + + A Q+R +VSA+L
Sbjct: 479 AYEGFQIWQKVLIGATVIFCATSGIPADVQFRVLLAGLAIVSAALAF 525
>gi|224286860|gb|ACN41133.1| unknown [Picea sitchensis]
Length = 544
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/545 (26%), Positives = 241/545 (44%), Gaps = 74/545 (13%)
Query: 69 KAHKLRKRTEPKLTKCHAVTDMSSSAVPTPDDHKVLVGPASEEE----SRGERRVADYDW 124
K +R+R T+ + +S++ P V+ G +S EE E + W
Sbjct: 39 KERSIRRRRNNFATRRRDLHVVSATVAP-----PVIPGSSSAEEYDKGREAEEESGKFLW 93
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-D 183
+ WYP+ L +D+ P + + IVL++D +G + +D+CPHRLA LSEG+L +
Sbjct: 94 RDHWYPVSLIEDLDPKIPTPFQLLGRDIVLWQDAEGNWKAFEDKCPHRLAPLSEGRLDEN 153
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVWMSQK 238
G L+C YHGW F+ +G C +IPQ ++ R+ AC ++ SQG+++VW +K
Sbjct: 154 GWLQCSYHGWSFKADGSCARIPQAASEGPEARAVGSPRACAVSFPTTVSQGLLFVWPDEK 213
Query: 239 -----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS 293
+ P LP + F+ P F V+ +L Y + L+EN+ DP+HI +H + +
Sbjct: 214 GWERASKFKPPLLP--DEFSDPRFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKV--T 269
Query: 294 AKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNNRESVDNKTGEK 352
+R+ A+PL F+V GF+G + P F APC N E
Sbjct: 270 GRRDRAKPLTFKVDSSGPWGFSGS-----NSETPKISASFIAPCYYINKIEIPVKLPLLG 324
Query: 353 HYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSASKVFEQ 402
+ +++C P GK+ IV RF G + W +L P W+ H +++KV++
Sbjct: 325 EQTWEIWICSFNTPMLPGKTRSIVCSARNFFRFTMPGPA-WWQLVPRWHEHWTSNKVYDG 383
Query: 403 DMGFLSSQNEVLLKE--------KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFG 454
DM L Q + L L F D +V +R W+ + G+G P + G
Sbjct: 384 DMIVLQGQEKTFLANTSTGDFDVNRDYSTLTFTPTQADRFVLAFRNWLRRYGNGQPEWLG 443
Query: 455 HSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAV 514
+T P +P+ V + + +RY +H + C C+ A
Sbjct: 444 PNTSGQP-LPSTV-----------------------LSKREMLDRYEQHTLKCSSCKKAH 479
Query: 515 KAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIR 574
++F + L A + A A + + R L SA++ AGV + N +
Sbjct: 480 QSFQQLQKFLLGATLVFAASAGIPPEMKLR-IILASAAVVTAGVAYLLKELEKNFSYIDY 538
Query: 575 THRRL 579
H +
Sbjct: 539 VHAEI 543
>gi|449493544|ref|XP_004159341.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 547
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 207/489 (42%), Gaps = 83/489 (16%)
Query: 114 RGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHR 172
R E +DW EWYP+ D+ P+G V +V++ D + + D CPHR
Sbjct: 75 RPEVEEEKFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHR 134
Query: 173 LAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQ 228
LA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV Y
Sbjct: 135 LAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQN 194
Query: 229 GVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 283
G++W W P D + P+ P + + ++ Y + IL+ENLMDPAH+
Sbjct: 195 GILWFW-PNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHV 253
Query: 284 PISHDRT-----DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV- 337
P +H + RE +PL V + GF G+ R + +F APCV
Sbjct: 254 PYAHYKIIPAPPSIKTDREGGRPLELVVEKLKADGFVGRHERLRH-------KFFAPCVY 306
Query: 338 --------LQNNRESVDNKTGEKHYSTG--------------LFLCRPTGQGKSMLIVRF 375
+Q N ES K E ST +F C P GKS LI F
Sbjct: 307 YFFTDPELVQGNVES-STKNDEAVSSTANKPPTEISQRRSFLVFFCIPVSPGKSRLIWAF 365
Query: 376 GTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT---KELYFNLRSID 432
+ P W FH + + + DM FL + E +E P+ K Y ++S D
Sbjct: 366 PRNFGKWMNYIVPRWMFHIGQNLILDSDMYFLRVE-EHKYEEIGPSNWHKACYVPVKS-D 423
Query: 433 TWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMH 492
V +R+W++K G + G + SLP +P
Sbjct: 424 ALVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPP--------------------------- 456
Query: 493 APNLANRYFRHVIHCKGCRSAVKAFNTWKNSL-STAAALLTALAILGAG---RQWRAFCL 548
+ RY+ HV++CK C A KA N + SL + + A + ALA++ G RA +
Sbjct: 457 REQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISMAAIGALALIKHGVLSATVRATIV 516
Query: 549 VSASLCLAG 557
A LC A
Sbjct: 517 TVAILCFAA 525
>gi|428223387|ref|YP_007107557.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7502]
gi|427996727|gb|AFY75422.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7502]
Length = 455
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 203/439 (46%), Gaps = 59/439 (13%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSE 178
A +D E WYP+ D+ P T+ DQ +VL+ D + R D+CPHRLA+LSE
Sbjct: 27 AYFDPKEAWYPVSYITDLERTKPTAFTLLDQDLVLWWDQNNKTWRAFADQCPHRLARLSE 86
Query: 179 GQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWV-- 233
G++ DG +EC YHGW F+G G C +IPQ +S ACV++Y +QG+++V
Sbjct: 87 GRIAEDGLIECPYHGWAFKGNGSCDRIPQKVKGGTAEQSSRACVKSYATATAQGLLFVCL 146
Query: 234 --WMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
+ SQ P D L + + ++T +LPYD S LLEN++D +H+P +H +
Sbjct: 147 GEYASQVKVPIIDAL----EQSPEAWVCLNTFRDLPYDASTLLENVLDSSHLPFTHHES- 201
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGE 351
R +A P+ E+T GF G W +G L + + N D + +
Sbjct: 202 -VGNRANAAPVELELTRSDKSGFTGVWA---EGPRKGTLGTQDTVFIAPNLMWHDLTSKQ 257
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGFL 407
+ + P +G+ L RF +S +IKL P W+ H + + + E D FL
Sbjct: 258 FGVTMTVVYATPMRKGECRLFARFPFQFSSKIPEFFIKLTPQWFSHINQNAILEDDQIFL 317
Query: 408 SSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVV 467
Q L +K + Y+ D +V EYRKW+ +
Sbjct: 318 HHQERYLELQKTNFAQAYYLPTKADLFVIEYRKWLSQFN--------------------- 356
Query: 468 EHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLS-- 525
A AG S S PA+ P L +RY H IHC CR+A+K K ++S
Sbjct: 357 ----ADPFAGQSLS-PAQP------KPVLLDRYHSHTIHCHSCRTALKNIQRLKIAVSGL 405
Query: 526 TAAALLTALAI----LGAG 540
A ALLT+L +GAG
Sbjct: 406 GAIALLTSLLFNWQYIGAG 424
>gi|303278118|ref|XP_003058352.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226459512|gb|EEH56807.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 573
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 206/457 (45%), Gaps = 77/457 (16%)
Query: 95 VPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 154
VPT PA+E+ + GE + YDW +WYP+ D+ DDAP T+ + +V
Sbjct: 72 VPTAIASPPASSPATEDAA-GEP--SSYDWHNQWYPVAFVADLVDDAPFTFTLLGEPLVF 128
Query: 155 YKD---------GKGELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEG-EGKCVK 203
+KD G G RC D+CPHRL LSEG++ D G +EC YHGW F+G GKC
Sbjct: 129 WKDKTTTTNSASGGGTYRCTADKCPHRLVPLSEGRVNDAGEIECGYHGWTFDGASGKCTS 188
Query: 204 IPQLPADAKI-------PRSACVRTYEVKESQGVVWVWMSQKTPPNPDK---LPWFENFA 253
IPQLPA PRS CV Y +QG+++V +P +P
Sbjct: 189 IPQLPATGNAIDTALASPRS-CVTPYPTAVAQGMLFVLPVSALKSDPASRPPVPVIPEID 247
Query: 254 RPG-----FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV-T 307
PG QD+S +LP D++ LLEN+MD +H+P +H + +RE+A P+ E+ T
Sbjct: 248 DPGASHCVVQDIS--RDLPMDYATLLENVMDISHVPFTHHGS--VGRRENATPVVAELTT 303
Query: 308 ERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTG 365
E D GF G W G + F+AP ++++ + ++ + + PT
Sbjct: 304 ELADGGFEGIWKEGPRNGKYGSQYTHFQAPALMRHTLRT------DQFTTLTVVYAVPTT 357
Query: 366 QGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT 421
G+ L+ RF + + KL P W+ H + + + E D FL Q ++ EK
Sbjct: 358 PGRCRLMARFPFIFKAAPPRFFFKLVPRWWSHLNQNSILEDDQIFLHKQERLIEIEKNVR 417
Query: 422 KELY----FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAG 477
+ Y + DT+V +R+W+ G P + P G+
Sbjct: 418 GKAYAQACYMPSQADTYVGAFRRWIVDNAGGSPAW------------------PKGMKDA 459
Query: 478 VSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAV 514
+ L K I +R+ H HCK C A+
Sbjct: 460 LPPQLTTKEQI--------LDRFHSHTEHCKSCAVAL 488
>gi|108706168|gb|ABF93963.1| Pheophorbide a oxygenase, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 654
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 213/456 (46%), Gaps = 70/456 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ P + ++ +V++KD K GE DRCPHRLA LSEG+
Sbjct: 201 FVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCPHRLAPLSEGR 260
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLP---ADAKIPRS--ACVRTYEVKESQGVVWVW 234
+ + G L+C YHGW F+G G C +IPQ +AK RS AC + SQG+++VW
Sbjct: 261 IDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPTLVSQGLLFVW 320
Query: 235 MSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ T P LP + F P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 321 PDENGWEKATATKPPMLP--KEFEDPAFSTVTIQRDLYYGYDTLMENVSDPSHIEFAHHK 378
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKT 349
+ +R+ A+PL F++ G++G G+ F APC N E +D K
Sbjct: 379 V--TGRRDRARPLPFKMESSGAWGYSG----SNSGNPRISATFVAPCYALNKIE-IDTKL 431
Query: 350 ---GEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSA 396
G++ + +++C P GK+ IV +F G + W +L P WY H ++
Sbjct: 432 PIFGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSMPGKA-WWQLVPRWYEHWTS 488
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTK--------ELYFNLRSIDTWVAEYRKWMDKAGHG 448
+ V++ DM L Q ++ L + ++ F D +V +R W+ K G+
Sbjct: 489 NLVYDGDMIVLQGQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAFRAWLRKFGNS 548
Query: 449 MPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCK 508
P +FG+ + + +P+ V + + +RY +H + C
Sbjct: 549 QPDWFGNPSQEV--LPSTV-----------------------LSKREMLDRYEQHTLKCS 583
Query: 509 GCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR 544
C+ A AF T + A A A + A Q+R
Sbjct: 584 SCKGAYNAFQTLQKVFMGATVAFCATAGIPADVQFR 619
>gi|15451611|gb|AAK98735.1|AC090485_14 Putative cell death suppressor protein [Oryza sativa Japonica
Group]
Length = 515
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 213/451 (47%), Gaps = 71/451 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ P + ++ +V++KD K GE DRCPHRLA LSEG+
Sbjct: 73 FVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCPHRLAPLSEGR 132
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLP---ADAKIPRS--ACVRTYEVKESQGVVWVW 234
+ + G L+C YHGW F+G G C +IPQ +AK RS AC + SQG+++VW
Sbjct: 133 IDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPTLVSQGLLFVW 192
Query: 235 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
P+ + LP + F P F V+ +L Y + L+EN+ DP+HI +H + +
Sbjct: 193 ------PDENGLP--KEFEDPAFSTVTIQRDLYYGYDTLMENVSDPSHIEFAHHKV--TG 242
Query: 295 KREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKT---GE 351
+R+ A+PL F++ G++G G+ F APC N E +D K G+
Sbjct: 243 RRDRARPLPFKMESSGAWGYSG----SNSGNPRISATFVAPCYALNKIE-IDTKLPIFGD 297
Query: 352 KHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSASKVFE 401
+ + +++C P GK+ IV +F G + W +L P WY H +++ V++
Sbjct: 298 QKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSMPGKA-WWQLVPRWYEHWTSNLVYD 354
Query: 402 QDMGFLSSQNEVLLKEKVPTK--------ELYFNLRSIDTWVAEYRKWMDKAGHGMPYYF 453
DM L Q ++ L + ++ F D +V +R W+ K G+ P +F
Sbjct: 355 GDMIVLQGQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAFRAWLRKFGNSQPDWF 414
Query: 454 GHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSA 513
G+ + + +P+ V + + +RY +H + C C+ A
Sbjct: 415 GNPSQEV--LPSTV-----------------------LSKREMLDRYEQHTLKCSSCKGA 449
Query: 514 VKAFNTWKNSLSTAAALLTALAILGAGRQWR 544
AF T + A A A + A Q+R
Sbjct: 450 YNAFQTLQKVFMGATVAFCATAGIPADVQFR 480
>gi|168000935|ref|XP_001753171.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695870|gb|EDQ82212.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 475
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 218/492 (44%), Gaps = 63/492 (12%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCH 165
P + E R A ++W +WYP+ + +D+ ++P T+ + + ++ D + + +
Sbjct: 5 PEAPEVQRSSEESA-FNWNTQWYPVAVERDLDKNSPHPATILGRPLAIWWDKSTSKWQVY 63
Query: 166 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGE-GKCVKIPQLPADAKI---PRSACVR 220
D+CPHRLA LSEG + + G L C YHGW F+G+ G+C IPQ P D K + ACV
Sbjct: 64 DDQCPHRLAPLSEGSISEEGHLRCSYHGWTFKGDSGECTGIPQAPKDGKQRHRSKRACVS 123
Query: 221 TYEVKESQGVVWVWMSQKTPP-------NPDKLPWFENFARPGFQDVSTIHELPYDHSIL 273
Y E QG++W W P NP P F + P F ++ +L Y + L
Sbjct: 124 VYPSMEQQGILWFWSDLSQGPVNIEAAANPP--PVFSELSDPDFGYDISLRDLEYSYETL 181
Query: 274 LENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTD-RGFAGQWGREKDGSMPNFLRF 332
+ENLMDPAH+ +H + R+ A+PL F +T + GF G+ + + +P
Sbjct: 182 IENLMDPAHVNFAHHKI--QGNRKSAEPLNFTITTKIAPSGFKGEDEKSVETFIPPVSFL 239
Query: 333 EAPCVLQNNRESV--------DNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWI 384
+ NN++ + + K + + LFLC P GKS LI F +
Sbjct: 240 LQFTLGGNNKQHIPVSHALNSEKKATKPKKVSLLFLCIPVSPGKSRLIWSFPRNFATFLF 299
Query: 385 KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSI----DTWVAEYRK 440
K+ P W H + + V + DM L L +V E +F I D +VA +R+
Sbjct: 300 KITPPWVLHMTNNLVLDSDMYLLHLLERRL---QVEGPENWFKRAYIPTTADAYVAGFRR 356
Query: 441 WMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRY 500
W++ G P + G +LP P P ++ +R+
Sbjct: 357 WLNDFAGGCPDWSGRFEDNLPPSP------PKRII---------------------LDRF 389
Query: 501 FRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYA 560
+HV+ CK C +A+K F + L A L + A +R +S L + V
Sbjct: 390 NQHVVKCKSCSNALKNFKALEVGLQILAIALVGVVAASAVVPFRPVAALSIPLVIGAV-- 447
Query: 561 CSTAISMNTTNF 572
ST +S +F
Sbjct: 448 VSTILSKWLAHF 459
>gi|41469406|gb|AAS07229.1| putative iron-sulfur cluster-binding protein [Oryza sativa Japonica
Group]
Length = 538
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 207/504 (41%), Gaps = 79/504 (15%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD--------G 158
P +E+ + +DW ++WYP+ D+ AP G TV +IV + D G
Sbjct: 61 PRAEDAPSASGKEERFDWLDQWYPVAPVCDLDPGAPHGKTVLGLRIVAWFDRTTAAADGG 120
Query: 159 KGELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIP 214
GE R D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA
Sbjct: 121 GGEWRVFDDSCPHRLAPLSEGRVDDKGRLQCVYHGWCFDGRGACQFIPQAPALGPAVHKN 180
Query: 215 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYD 269
ACV +Y ++W + + P + L P+ P F V + +LPY
Sbjct: 181 SKACVASYPCVVQNNILWFY-PRSEPEYKEILQRKRPPYIPQIDDPSFVTVYGVRDLPYG 239
Query: 270 HSILLENLMDPAHIPISHDRTDYSAKRED----------AQPLGFEVTERTDRGFAGQWG 319
+ +L+ENLMDPAH+P +H + K+ED PL E+ E GF
Sbjct: 240 YDVLVENLMDPAHVPYAHKGLMRTRKKEDPGRVEFDKEGGGPLKMEIEETNVEGFLSMLD 299
Query: 320 REKDGSMPNFLRFEAPCV-----LQNNRESVDNKTGEKHYSTGL--FLCRPTGQGKSMLI 372
R F +F APC LQ + K +K T + FLC P G+S L+
Sbjct: 300 R-------GFFKFVAPCTFYGSPLQTPSQDDQGKEKKKKQPTVMLVFLCIPVSPGRSRLV 352
Query: 373 VRFGTTGTSPWI-KLFPDWYFHQSASKVFEQDMGFL--SSQNEVLLKEKVPTKELYFNLR 429
F W+ K+ P WY+H + + + D+ L +N + K Y
Sbjct: 353 WAF-PRNVGVWMDKIIPRWYYHIGQNAILDSDIYLLHIEERNFATVGLDNWQKACYVPTS 411
Query: 430 SIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIG 489
S D + +R W K Y H G ++ LP
Sbjct: 412 S-DNMIITFRNWFRK-------YCKHQI---------------GWATPITNQLPP----- 443
Query: 490 TMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR-----QWR 544
T L +RY+ HV+ C C A+K + +L A+ + + G R
Sbjct: 444 TPSKDQLLDRYWSHVMQCTSCSGALKKMKALEVALQVASVAVVGFLAVAKGTVVTSVVQR 503
Query: 545 AFCLVSASLCLAGVYACSTAISMN 568
+ + +A LC A + I N
Sbjct: 504 SAVVAAAVLCFAASRWLANFIEKN 527
>gi|115450715|ref|NP_001048958.1| Os03g0146400 [Oryza sativa Japonica Group]
gi|113547429|dbj|BAF10872.1| Os03g0146400 [Oryza sativa Japonica Group]
Length = 529
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 213/456 (46%), Gaps = 70/456 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ P + ++ +V++KD K GE DRCPHRLA LSEG+
Sbjct: 76 FVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCPHRLAPLSEGR 135
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLP---ADAKIPRS--ACVRTYEVKESQGVVWVW 234
+ + G L+C YHGW F+G G C +IPQ +AK RS AC + SQG+++VW
Sbjct: 136 IDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPTLVSQGLLFVW 195
Query: 235 MSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ T P LP + F P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 196 PDENGWEKATATKPPMLP--KEFEDPAFSTVTIQRDLYYGYDTLMENVSDPSHIEFAHHK 253
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKT 349
+ +R+ A+PL F++ G++G G+ F APC N E +D K
Sbjct: 254 V--TGRRDRARPLPFKMESSGAWGYSG----SNSGNPRISATFVAPCYALNKIE-IDTKL 306
Query: 350 ---GEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSA 396
G++ + +++C P GK+ IV +F G + W +L P WY H ++
Sbjct: 307 PIFGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSMPGKA-WWQLVPRWYEHWTS 363
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTK--------ELYFNLRSIDTWVAEYRKWMDKAGHG 448
+ V++ DM L Q ++ L + ++ F D +V +R W+ K G+
Sbjct: 364 NLVYDGDMIVLQGQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAFRAWLRKFGNS 423
Query: 449 MPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCK 508
P +FG+ + + +P+ V + + +RY +H + C
Sbjct: 424 QPDWFGNPSQEV--LPSTV-----------------------LSKREMLDRYEQHTLKCS 458
Query: 509 GCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR 544
C+ A AF T + A A A + A Q+R
Sbjct: 459 SCKGAYNAFQTLQKVFMGATVAFCATAGIPADVQFR 494
>gi|125542400|gb|EAY88539.1| hypothetical protein OsI_10012 [Oryza sativa Indica Group]
gi|222624188|gb|EEE58320.1| hypothetical protein OsJ_09401 [Oryza sativa Japonica Group]
Length = 526
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 213/456 (46%), Gaps = 70/456 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ P + ++ +V++KD K GE DRCPHRLA LSEG+
Sbjct: 73 FVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCPHRLAPLSEGR 132
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLP---ADAKIPRS--ACVRTYEVKESQGVVWVW 234
+ + G L+C YHGW F+G G C +IPQ +AK RS AC + SQG+++VW
Sbjct: 133 IDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPTLVSQGLLFVW 192
Query: 235 MSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ T P LP + F P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 193 PDENGWEKATATKPPMLP--KEFEDPAFSTVTIQRDLYYGYDTLMENVSDPSHIEFAHHK 250
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKT 349
+ +R+ A+PL F++ G++G G+ F APC N E +D K
Sbjct: 251 V--TGRRDRARPLPFKMESSGAWGYSG----SNSGNPRISATFVAPCYALNKIE-IDTKL 303
Query: 350 ---GEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSA 396
G++ + +++C P GK+ IV +F G + W +L P WY H ++
Sbjct: 304 PIFGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSMPGKA-WWQLVPRWYEHWTS 360
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTK--------ELYFNLRSIDTWVAEYRKWMDKAGHG 448
+ V++ DM L Q ++ L + ++ F D +V +R W+ K G+
Sbjct: 361 NLVYDGDMIVLQGQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAFRAWLRKFGNS 420
Query: 449 MPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCK 508
P +FG+ + + +P+ V + + +RY +H + C
Sbjct: 421 QPDWFGNPSQEV--LPSTV-----------------------LSKREMLDRYEQHTLKCS 455
Query: 509 GCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR 544
C+ A AF T + A A A + A Q+R
Sbjct: 456 SCKGAYNAFQTLQKVFMGATVAFCATAGIPADVQFR 491
>gi|242042229|ref|XP_002468509.1| hypothetical protein SORBIDRAFT_01g047120 [Sorghum bicolor]
gi|241922363|gb|EER95507.1| hypothetical protein SORBIDRAFT_01g047120 [Sorghum bicolor]
Length = 524
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 222/485 (45%), Gaps = 74/485 (15%)
Query: 93 SAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQI 152
++VP + ++ E GE+ + W + WYP+ L +D+ P + ++ +
Sbjct: 46 TSVPGEAAEQAEPSTSAPESESGEK----FSWRDHWYPVSLVEDLDPSRPTPFQLLNRDL 101
Query: 153 VLYKDGK-GELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ---- 206
V++K+ K GE DRCPHRLA LSEG++ + G L+C YHGW F+G G C +IPQ
Sbjct: 102 VIWKEPKSGEWVALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIPQAMPE 161
Query: 207 -LPADAKIPRSACVRTYEVKESQGVVWVW-----MSQKTPPNPDKLPWFENFARPGFQDV 260
L A A AC + SQG+++VW + T P LP + F P F V
Sbjct: 162 GLEARAVRSPKACAIKFPTLVSQGLLFVWPDENGWEKATATKPPMLP--KEFDDPAFSTV 219
Query: 261 STIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGR 320
+ +L Y + L+EN+ DP+HI +H + + +R+ A+PL F++ G++G
Sbjct: 220 TIQRDLFYGYDTLMENVSDPSHIEFAHHKV--TGRRDRAKPLTFKMESSGAWGYSGA--- 274
Query: 321 EKDGSMPNFLRFEAPCVLQNNRESVDNKT---GEKHYSTGLFLCR---PTGQGKSMLIV- 373
G+ FEAPC N E +D K G++ + +++C P GK+ IV
Sbjct: 275 -NSGNPRITATFEAPCYALNKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIVC 330
Query: 374 ------RFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTK----- 422
+F G + W +L P WY H +++ V++ DM L Q ++ L T
Sbjct: 331 SARNFFQFTMPGKA-WWQLVPRWYEHWTSNLVYDGDMIVLQGQEKIFLAATKETSTDVNQ 389
Query: 423 ---ELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVS 479
++ F D +V +R W+ K G+ P +FG+ S +P+ V
Sbjct: 390 QYTKITFTPTQADRFVLAFRAWLRKFGNSQPEWFGNP--SQEALPSTV------------ 435
Query: 480 ASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGA 539
+ + +RY +H + C C+ A AF T + A + A A + A
Sbjct: 436 -----------LSKREMLDRYEQHTLKCSSCKGAYHAFQTLQKVFMGATVVGCATAGIPA 484
Query: 540 GRQWR 544
Q R
Sbjct: 485 DVQLR 489
>gi|168059614|ref|XP_001781796.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666703|gb|EDQ53350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 474
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 212/493 (43%), Gaps = 62/493 (12%)
Query: 106 GPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCH 165
G + E + E + W WYP+ +D+ P + +++V++KD +GE R
Sbjct: 9 GGEEKLEEQKENSEESFVWRNHWYPVSTIEDLDPSVPTPFQLLGRELVVWKDNQGEWRVF 68
Query: 166 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP-----ADAKIPRSACV 219
D+CPHRLA LSEG+L + G L+C YHGW F G+G C IPQ A A+ AC
Sbjct: 69 VDKCPHRLAPLSEGRLDESGMLQCSYHGWSFNGDGSCGAIPQAAKEGPEAKARFSPRACA 128
Query: 220 RTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
+Y + SQG+++VW +K + P LP F+ P F V+ +L Y + L+
Sbjct: 129 ASYPTRVSQGLLFVWPDEKGWEKASAATPPMLP--PEFSDPRFSTVTIQRDLFYGYDTLM 186
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEA 334
EN+ DP+HI +H + + +RE A+PL F+V + GF G + S F
Sbjct: 187 ENVSDPSHIDFAHHKV--TGRRERAKPLPFKVHKSGPWGFTGA----NNDSPTISCGFYP 240
Query: 335 PCVLQNNRESVDNKTGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWI 384
PC N E + + +C P GK+ IV +F G W
Sbjct: 241 PCYYYNKIELLVKLPILGDQKWEVLICSFNVPMSPGKTRSIVCSARNFFQFSMPGDK-WW 299
Query: 385 KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKE----KVPTKELYFNLRSIDTWVAEYRK 440
+L P WY H +++ V++ DM L Q + L +L F D +V +R
Sbjct: 300 QLTPRWYEHWTSNLVYDGDMIVLQGQEKGFLSYDGDVNAEYSKLTFTPTQADRFVLAFRN 359
Query: 441 WMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRY 500
W+ + G G P +F + LP P+ V + + +R+
Sbjct: 360 WLKRHGKGGPEWFPETKTGLPP-PSTV-----------------------LSKREMLDRF 395
Query: 501 FRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYA 560
+H + C C+ A + F W+ L + +L A A + R A + A Y
Sbjct: 396 DQHTLICSSCKKAQQDFQLWQKMLWGSTVVLAAGAGVPPDLTVRVILAGGAIISAALAYT 455
Query: 561 CSTAISMNTTNFI 573
A NFI
Sbjct: 456 LKEA----EKNFI 464
>gi|412985453|emb|CCO18899.1| cell death suppressor protein Lls1-like [Bathycoccus prasinos]
Length = 598
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 215/473 (45%), Gaps = 90/473 (19%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKG-------ELRCHQDRCPHRLA 174
+DW +WYP+ D+ DDAP T+ +V +K+ K E C D CPHRLA
Sbjct: 107 FDWHSQWYPIAFECDLEDDAPYAFTLLGTPLVFWKNKKSGASDDAPEYSCVADMCPHRLA 166
Query: 175 KLSEGQLID-GRLECLYHGWQFEGE-GKCVKIPQLPADA-------KIPRSACVRTYEVK 225
LSEG++ D G +EC YHGW FEG+ GKC IPQL ++ PR AC Y K
Sbjct: 167 PLSEGRINDKGEIECGYHGWTFEGKSGKCTSIPQLGSEGPAVDTALNSPR-ACATPYYTK 225
Query: 226 ESQGVVWVWMSQ----KTPPNPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMD 279
+QGV+W + ++ KT + LP P +QDV +LP D+S LLEN+MD
Sbjct: 226 VAQGVLWCYPTKIDGTKTVDDLPPLPLIPELDDPMCVYQDV--FRDLPMDYSTLLENVMD 283
Query: 280 PAHIPISHDRTDYSAKREDAQPLGFEVTERTDR----GFAGQW--GREKDGSMPNFLRFE 333
+H+P +H + KRE+A P+ E+T + GF G+W G K + F+
Sbjct: 284 VSHVPFTHHNS--VGKRENATPVVLELTTEDKKVSRNGFTGEWKEGPRKGKYGTQYTEFQ 341
Query: 334 APCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWI--------- 384
AP ++++ + T Y+ P GK LI RF P+I
Sbjct: 342 APALMRHTLRTDQFTTLTVVYAV------PIAPGKCRLIARF------PFIFKAALPRKL 389
Query: 385 -KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY----FNLRSIDTWVAEYR 439
LFP WY H + + + E D FL Q ++ + E Y + S D +V +R
Sbjct: 390 FGLFPKWYTHTNQNAILEDDQIFLHKQERLIEISRTVKNEKYAKACYMPSSADVYVNAFR 449
Query: 440 KWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANR 499
W+ +G P S P+ G+S LP + T A L +R
Sbjct: 450 NWIVDVANGGP--------SWPE--------------GMSTKLPPQE--ETREA--LLDR 483
Query: 500 YFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSAS 552
Y H +CK C A+ ++ L + L ALA+ A + A C+ S++
Sbjct: 484 YHAHTKNCKSCAQALAKIVIFRKFLRVFS--LVALAVTTA---FVAACISSST 531
>gi|434388645|ref|YP_007099256.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019635|gb|AFY95729.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 462
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 206/457 (45%), Gaps = 59/457 (12%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQDRCPHRLAKLSEGQ 180
+D E WYP++ +D+ P T+ D+ +V++ D + + R DRCPHRLA+LSEG+
Sbjct: 20 FDPIESWYPVFYIEDLDKLTPTPFTLLDRDLVIWWDTQASQWRAFDDRCPHRLARLSEGR 79
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADAK--IPRSACVRTYEVKESQGVVWVWM-- 235
+ DG LEC YHGW F G G C +IPQ DAK R ACV++ QG+++++
Sbjct: 80 IAEDGLLECPYHGWAFTGNGTCDRIPQQLPDAKAETSRRACVKSLPTAVEQGLLFIYAGT 139
Query: 236 ---SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDY 292
+++TP +P + G+ ++T +LPYD LLEN++DP+H+P +H +
Sbjct: 140 PARAEQTPIPLIPVPMVDGKPTDGWLVLNTFRDLPYDALTLLENVLDPSHLPYTHHGS-- 197
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
KR +A P+ EVT GF G W G K F APC++ + E + G
Sbjct: 198 VGKRSNASPVELEVTSSDKLGFTGTWADGPRKGTLGRQNTTFIAPCLMWH--ELTSKQFG 255
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGF 406
E + + P +G+ + RF S +IK P+WY H + + + E D F
Sbjct: 256 E---TITVVYATPKRKGECRIFARFPFKFASKVPEFFIKATPEWYSHINNNAILEDDQIF 312
Query: 407 LSSQNEVLLKEKVPTK--ELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVP 464
L Q L + T + ++ D +V EYR+W++
Sbjct: 313 LHHQERYLEQSGGSTNFSQSFYLPTKADAFVFEYRQWLNDYR------------------ 354
Query: 465 AVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL 524
+ P + + L +RY H HC C +A K T K+++
Sbjct: 355 --------------AEPFPGQTFKPPLTTERLLDRYHSHTEHCHSCSTAYKNIQTAKSAI 400
Query: 525 STAAALL-TALAILGAGRQWRAF--CLVSASLCLAGV 558
A L + ILG A L+S + L G
Sbjct: 401 VIIALLAWISTTILGLTGSENALFPALISIGIVLGGT 437
>gi|326490297|dbj|BAJ84812.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514506|dbj|BAJ96240.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 536
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 215/470 (45%), Gaps = 74/470 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ P + ++ +V++ D G+ DRCPHRLA LSEG+
Sbjct: 83 FVWRDHWYPVSLVEDLDPRVPTPFQLLNRDLVIWNDPNSGDWVALDDRCPHRLAPLSEGR 142
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW 234
+ + G L+C YHGW F+G G C +IPQ A+ R+ AC + SQG+++VW
Sbjct: 143 IDETGGLQCSYHGWSFDGSGACTRIPQAAAEGPEARAVRSPRACATKFPTLLSQGLLFVW 202
Query: 235 MSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ P LP + F P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 203 PDENGWDKAKATKPPMLP--KEFDDPAFSTVTIQRDLFYGYDTLMENVSDPSHIEFAHHK 260
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK- 348
+ +R+ A+PL F++ G++G G+ FEAPC N E +D K
Sbjct: 261 V--TGRRDRAKPLPFKMESSGAWGYSG----ANTGNPRITATFEAPCYALNKIE-IDTKL 313
Query: 349 --TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSA 396
G++ + +++C P GK+ IV +F G + W +L P WY H ++
Sbjct: 314 PIVGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFTMPGKA-WWQLVPRWYEHWTS 370
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTK--------ELYFNLRSIDTWVAEYRKWMDKAGHG 448
+ V++ DM L Q +V L + +L F D +V +R W+ K G+
Sbjct: 371 NLVYDGDMIVLQGQEKVFLSASKESSADVNQQYTKLTFTPTQADRFVLAFRAWLRKFGNS 430
Query: 449 MPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCK 508
P ++G T +LP+ + + +RY +H + C
Sbjct: 431 QPDWYGSPT---------------------QDALPST----VLSKREMLDRYEQHTLKCS 465
Query: 509 GCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR----AFCLVSASLC 554
CR A KAF T + A + + + A Q R A L+SA+L
Sbjct: 466 SCRGAHKAFQTLQKVFMGATVVFGVTSGIPADVQLRILLGAGALISAALA 515
>gi|75906758|ref|YP_321054.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75700483|gb|ABA20159.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 460
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 203/452 (44%), Gaps = 58/452 (12%)
Query: 103 VLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL 162
V P E+ G +DW E WYP++ +D+ P T+ + IV++ D + +
Sbjct: 2 VNTNPTLEQILPGGSDPHSFDWHEAWYPVHYLEDLDKSKPTAFTLLGKDIVIWWDQQSQT 61
Query: 163 -RCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSAC 218
+ +D+CPHRLA LSEG++ + G LEC YHGW F G+G C +IPQ P A+ + AC
Sbjct: 62 WQAFEDQCPHRLAPLSEGRINEEGLLECPYHGWSFAGDGSCQRIPQQPEGGQAETSQRAC 121
Query: 219 VRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARP--GFQDVSTIHELPYDHSILLEN 276
V ++ E QG+++V++ K+P E G+ ++T ++PYD LLEN
Sbjct: 122 VTSWLTTERQGMLFVYIGNPENAAKTKIPVVEPLEESPDGWVIINTFRDVPYDALTLLEN 181
Query: 277 LMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGRE-KDGSMPNFLRFEAP 335
++DP+H+ +H +T R++A PL EV GF G W + K G F AP
Sbjct: 182 ILDPSHLAYTHHKT--VGNRKNAAPLELEVVVSGKHGFKGVWHQSIKAGQSELSTTFVAP 239
Query: 336 CVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWY 391
++ ++ S + Y+T P +G+ L RF S +IKL P WY
Sbjct: 240 ALMWHDINSERGRILTVVYAT------PIRKGECRLFARFPFKFPSKLPGIFIKLRPRWY 293
Query: 392 FHQSASKVFEQDMGFLSSQNEVL-LKEKVP--TKELYFNLRSIDTWVAEYRKWMDKAGHG 448
+H + V E D FL Q L K P TK Y ++ D++V E R+W++
Sbjct: 294 YHLGQNGVLEDDQIFLHYQERYLQAKGGSPNFTKAFYLPTKA-DSFVFELRQWVNNYN-- 350
Query: 449 MPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCK 508
+ P + + L RY+ H I C
Sbjct: 351 ------------------------------AEPFPGQAFSQAIPKEQLLERYYSHTIKCA 380
Query: 509 GCRSA---VKAFNTWKNSLSTAAALLTALAIL 537
CR+A ++ W ++ + + T L L
Sbjct: 381 SCRNALAKIQKLRLWSGVITVISLVSTPLITL 412
>gi|356525253|ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 531
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 229/561 (40%), Gaps = 75/561 (13%)
Query: 43 LKIPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMSSSAVPTPDDHK 102
L IP+ P+ F N ++ + LR ++ KL + ++ S+ P+
Sbjct: 12 LHIPTAHETPNSFRKSIFLSNQVASPVSLVLRGASKSKLFTALSPPPLTESSNNQPE--- 68
Query: 103 VLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGE 161
E E E +DW WYPL D+ P G V +V++ D +G
Sbjct: 69 -------EAEPEFESHAEKFDWYSHWYPLMPICDLDKRKPHGKRVLGIDVVVWWDRNEGV 121
Query: 162 LRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSA 217
+ H D CPHRLA LS+G++ GRL+C+YHGW F G+G+C IPQ P D + A
Sbjct: 122 WQVHDDACPHRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECKLIPQAPPDGPPVHTSKKA 181
Query: 218 CVRTYEVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELP 267
CV Y ++W W PN D + P+ P + + ++
Sbjct: 182 CVAAYPSTVQNDILWFW------PNTDPQYKDIITRKRPPYIPELDDPSYTKLMGNRDIS 235
Query: 268 YDHSILLENLMDPAHIPISH------DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGRE 321
Y + +L+ENLMDPAH+P +H + RE +PL + GF G
Sbjct: 236 YGYEVLIENLMDPAHVPYAHYGLMRTPKPKVKVDREGGRPLELSIETLDINGFTANQGWS 295
Query: 322 KDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTS 381
K MP + + Q + K+ + +F+C P GKS LI F
Sbjct: 296 KSKFMPPCIFYVYTDSDQPASSAETQKSSAQKKFALIFVCVPVSPGKSRLIWCF-PRNFG 354
Query: 382 PWI-KLFPDWYFHQSASKVFEQDMGFL--SSQNEVLLKEKVPTKELYFNLRSIDTWVAEY 438
WI K+ P W FH +++ + D+ L Q V + K K + +S D V Y
Sbjct: 355 VWIDKIVPRWIFHVGQNRILDSDLYLLHVEEQKIVDIGPKNWHKACFVPTKS-DALVIGY 413
Query: 439 RKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLAN 498
R W+ K G + G + +LP P + L +
Sbjct: 414 RNWLKKYAGGQVDWRGKYSGALPPTPPREQ---------------------------LMD 446
Query: 499 RYFRHVIHCKGCRSAVKAFNTWKNSLS-TAAALLTALAILGAGRQWRAFCLVSASLCLAG 557
RY+ HV++CK C SA K+ N + L + A + +AI+ G V+ +
Sbjct: 447 RYWSHVVNCKSCNSAYKSLNVIEVMLQIISVASIGIVAIMKHGTM-----SVAKRNSMVA 501
Query: 558 VYACSTAISMNTTNFIRTHRR 578
+ S A+S +FI + R
Sbjct: 502 LAVLSLALSRWLAHFIYKNFR 522
>gi|414873470|tpg|DAA52027.1| TPA: putative pheophorbide a oxygenase [Zea mays]
Length = 525
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 204/495 (41%), Gaps = 74/495 (14%)
Query: 107 PASEEES---RGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGEL 162
P +EE+ GE R +DW ++WYPL D+ AP G TV +V + D G GE
Sbjct: 61 PRTEEQQPSPSGEER---FDWLDQWYPLAPVCDLDPRAPHGKTVLGLSVVAWYDRGAGEW 117
Query: 163 RCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSAC 218
R D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA AC
Sbjct: 118 RVFDDACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRAC 177
Query: 219 VRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSIL 273
V +Y ++W + + P + D L P P F V I +LPY + IL
Sbjct: 178 VASYPCVVQNNILWFY-PRADPEHSDVLQRKRPPLIPEIDDPDFVTVYGIRDLPYGYDIL 236
Query: 274 LENLMDPAHIPISHD-------------RTDYSAKREDAQPLGFEVTERTDRGFAGQWGR 320
+ENLMDPAH+P +H R DY +E P+ ++ + GF R
Sbjct: 237 VENLMDPAHVPYAHKGIMRGIRKKEDPGRVDYD--KEGGGPVKMKIEQANIEGFVSPQER 294
Query: 321 EKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGT 380
+ +F APC + + + +F C P G G+S +I F
Sbjct: 295 -------GYFQFVAPCTFFGTPFVQEGQKKKAPRVMLVFFCIPVGPGRSRVIWAF-PRNV 346
Query: 381 SPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT-KELYFNLRSIDTWVAEY 438
W+ + P W +H + + + D+ L + + + + S D V +
Sbjct: 347 GVWLHHITPRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPTSSDAMVVAF 406
Query: 439 RKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLAN 498
R W K G +T+ + ++P T L
Sbjct: 407 RNWFRKFCKNQ---VGWATLQVDQLPP------------------------TRTKDQLME 439
Query: 499 RYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQW-----RAFCLVSASL 553
RY+ HV+ C+ C +A+KA + +L A+ + + G RA + + L
Sbjct: 440 RYWSHVVQCRSCNAALKAMKALEAALQVASVAVVGFLAVAKGTVLTSTVQRAAVVSATVL 499
Query: 554 CLAGVYACSTAISMN 568
C A + I N
Sbjct: 500 CFAASRWLANFIQKN 514
>gi|326487416|dbj|BAJ89692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 517
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 207/491 (42%), Gaps = 67/491 (13%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCH 165
P +E+E + +DW ++WYP +D+ AP G V ++V + D G GE R
Sbjct: 54 PWTEQEPASGEKEERFDWLDQWYPFSPVEDLDPGAPHGKMVLGIRVVAWYDRGAGEWRVF 113
Query: 166 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRT 221
D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA ACV +
Sbjct: 114 DDACPHRLAPLSEGRIDDKGRLQCVYHGWCFDGRGACKFIPQAPALGPPVHTNSKACVPS 173
Query: 222 YEVKESQGVVWVW----MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 277
Y ++W + K + P+ P F + ++PY + +L ENL
Sbjct: 174 YPCVVQNKILWFYPRAGAEHKDVLQRKRPPFIPEIDDPSFVTSFLVRDMPYGYDVLAENL 233
Query: 278 MDPAHIPISHD-------------RTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDG 324
MDP+H+P +H R +Y +E P+ +V E + GFA G
Sbjct: 234 MDPSHVPYAHKGLLRGLPRLVDPGRVEYD--KEGGVPMAVKVEESSVNGFASSQG----- 286
Query: 325 SMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWI 384
P + F APC + S ++ + H +F+ P G+S ++ F
Sbjct: 287 --PGYSNFVAPCTYYGSPASKKSEKNKPHIML-VFIIVPVAPGRSRVMWAFPRNFGLWLA 343
Query: 385 KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT--KELYFNLRSIDTWVAEYRKWM 442
K+ P W+ H + + + DM L + K + K +Y S T VA +R W
Sbjct: 344 KITPRWFDHIGVNAILDSDMYLLHIEERNFAKAGIENWQKSVYVPTSSDGTVVA-FRNWF 402
Query: 443 DKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFR 502
K + G + ++ ++PA P K L +RY+
Sbjct: 403 RKYCR---FQVGWAAPTVDQLPAT----------------PTKD--------KLMDRYWS 435
Query: 503 HVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR-----QWRAFCLVSASLCLAG 557
HV C C +A+KA + +L A+ + L + G RA + +A LC A
Sbjct: 436 HVAQCASCSAALKAMKALEVALQVASVAVVGLLAVAKGTLLTSVAQRAAVVSAAVLCFAA 495
Query: 558 VYACSTAISMN 568
+ I N
Sbjct: 496 SRWLADFIQKN 506
>gi|297815634|ref|XP_002875700.1| hypothetical protein ARALYDRAFT_905628 [Arabidopsis lyrata subsp.
lyrata]
gi|297321538|gb|EFH51959.1| hypothetical protein ARALYDRAFT_905628 [Arabidopsis lyrata subsp.
lyrata]
Length = 537
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 226/501 (45%), Gaps = 78/501 (15%)
Query: 110 EEESRG--ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQ 166
EEE G E +++ W + WYP+ L +D+ + P + + +VL+ D +
Sbjct: 68 EEEFGGDTEEEESEFKWRDHWYPVSLVEDLDPNVPTRFQLLGRDLVLWFDRNDQKWAAFD 127
Query: 167 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACV 219
D CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ K PR AC
Sbjct: 128 DLCPHRLAPLSEGRLDENGHLQCSYHGWSFSGCGSCTRIPQAATSGPEARAVKSPR-ACA 186
Query: 220 RTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
+ SQG+++VW + P +LP ++F RP F V+ +L Y + L+
Sbjct: 187 IKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP--DDFDRPEFSTVTIQRDLFYGYDTLM 244
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEA 334
EN+ DP+HI +H + + +R+ A+PL F+V GF G D + +F A
Sbjct: 245 ENVSDPSHIDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQG----ANDDNPRITAKFVA 298
Query: 335 PCVLQNNRESVDNKT---GEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTS 381
PC N E +D K G + + +++C P GK+ IV +F G +
Sbjct: 299 PCYSLNKIE-IDAKLPIFGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPA 355
Query: 382 PWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE---------LYFNLRSID 432
W ++ P WY H +++ V++ DM L Q +V L + + + + L F D
Sbjct: 356 -WWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLSKSMESPDYDVNKQYTKLTFTPTQAD 414
Query: 433 TWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMH 492
+V +R W+ + G P +FG +T + P +P+ V +
Sbjct: 415 RFVLAFRNWLRRHGKSQPEWFGSTTANQP-LPSTV-----------------------LT 450
Query: 493 APNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSAS 552
+ +R+ +H C C+ A +F K L A A A + + Q R LV A
Sbjct: 451 KRQMLDRFEQHTQVCSSCKGAYNSFQILKKFLVGATVFCAATAGVPSDVQIR---LVLAG 507
Query: 553 LCLAGVYACSTAISMNTTNFI 573
L L A + A+ NF+
Sbjct: 508 LSLISA-ASAYALHEQEKNFV 527
>gi|378830101|gb|AFC61176.1| lethal leaf spot1 [Triticum aestivum]
Length = 523
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 216/470 (45%), Gaps = 74/470 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ P + ++ +V++ D G+ DRCPHRLA LSEG+
Sbjct: 70 FVWRDHWYPVSLVEDLDPRVPTPFQLLNRDLVIWNDPNSGDWVALDDRCPHRLAPLSEGR 129
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW 234
+ + G L+C YHGW F+G G C +IPQ + R+ AC + SQG+++VW
Sbjct: 130 IDETGGLQCSYHGWSFDGSGACTRIPQAAPEGPEARAVRSPRACATKFPTLLSQGLLFVW 189
Query: 235 -----MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ P LP + F P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 190 PDENGWDKAKATKPPMLP--KEFDDPAFSTVTIQRDLFYGYDTLMENVSDPSHIEFAHHK 247
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK- 348
+ +R+ A+PL F++ G++G G+ FEAPC N E +D K
Sbjct: 248 V--TGRRDRAKPLPFKMESSGAWGYSG----ANTGNPRITATFEAPCYALNKIE-IDTKL 300
Query: 349 --TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSA 396
G++ + +++C P GK+ IV +F G + W +L P WY H ++
Sbjct: 301 PIVGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFTMPGKA-WWQLVPRWYEHWTS 357
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTK--------ELYFNLRSIDTWVAEYRKWMDKAGHG 448
+ V++ DM L Q +V L + +L F D +V +R W+ K G+
Sbjct: 358 NLVYDGDMIVLQGQEKVFLSASKESSADVNQQYTKLTFTPTQADRFVLAFRAWLRKFGNS 417
Query: 449 MPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCK 508
P ++G + S +P+ V + + +RY +H + C
Sbjct: 418 QPDWYG--SPSQDALPSTV-----------------------LSKREMLDRYEQHTLKCS 452
Query: 509 GCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR----AFCLVSASLC 554
CR A KAF T + A + A + + A Q R A L+SA+L
Sbjct: 453 SCRGAHKAFQTLQKVFMGATVVFGATSGIPADVQLRILLGAGALISAALA 502
>gi|414864800|tpg|DAA43357.1| TPA: lethal leaf spot1 [Zea mays]
Length = 520
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 220/480 (45%), Gaps = 82/480 (17%)
Query: 94 AVPT--PDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQ 151
A PT P + P++ GE+ + W + WYP+ L +D+ P + ++
Sbjct: 41 AAPTSVPGEAAEQAEPSTSAPESGEK----FSWRDHWYPVSLVEDLDPSRPTPFQLLNRD 96
Query: 152 IVLYKDGK-GELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ-LP 208
+V++K+ K GE DRCPHRLA LSEG++ + G L+C YHGW F+G G C KIPQ +P
Sbjct: 97 LVIWKEPKSGEWVALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTKIPQAMP 156
Query: 209 A--DAKIPRS--ACVRTYEVKESQGVVWVW-----MSQKTPPNPDKLPWFENFARPGFQD 259
+A+ RS AC + SQG+++VW + P LP + F P F
Sbjct: 157 EGPEARAVRSPKACAIKFPTLVSQGLLFVWPDENGWEKAAATKPPMLP--KEFEDPAFST 214
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWG 319
V+ +L Y + L+EN+ DP+HI +H + + +R+ A+PL F + G++G
Sbjct: 215 VTIQRDLFYGYDTLMENVSDPSHIEFAHHKV--TGRRDRARPLTFRMESSGAWGYSG--- 269
Query: 320 REKDGSMPNFLRFEAPCVLQNNRESVDNKT---GEKHYSTGLFLCR---PTGQGKSMLIV 373
G+ FEAPC N E +D K G++ + +++C P GK+ IV
Sbjct: 270 -ANSGNPRITATFEAPCYALNKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIV 325
Query: 374 -------RFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE--- 423
+F G + W +L P WY H +++ V++ DM L Q ++ L TKE
Sbjct: 326 CSARNFFQFTMPGKA-WWQLVPRWYEHWTSNLVYDGDMIVLQGQEKIFL---AATKESST 381
Query: 424 --------LYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLV 475
+ F D +V +R W+ K G+ P +FG+ T
Sbjct: 382 DINQQYTKITFTPTQADRFVLAFRTWLRKFGNSQPEWFGNPT------------------ 423
Query: 476 AGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALA 535
+LP+ + + +RY +H + C C+ A AF + A + A A
Sbjct: 424 ---QEALPST----VLSKREMLDRYEQHTLKCSSCKGAYNAFQNLQKVFMGATVVCCAAA 476
>gi|414873471|tpg|DAA52028.1| TPA: putative pheophorbide a oxygenase [Zea mays]
Length = 523
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 204/495 (41%), Gaps = 76/495 (15%)
Query: 107 PASEEES---RGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGEL 162
P +EE+ GE R +DW ++WYPL D+ AP G TV +V + D G GE
Sbjct: 61 PRTEEQQPSPSGEER---FDWLDQWYPLAPVCDLDPRAPHGKTVLGLSVVAWYDRGAGEW 117
Query: 163 RCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSAC 218
R D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA AC
Sbjct: 118 RVFDDACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRAC 177
Query: 219 VRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSIL 273
V +Y ++W + + P + D L P P F V I +LPY + IL
Sbjct: 178 VASYPCVVQNNILWFY-PRADPEHSDVLQRKRPPLIPEIDDPDFVTVYGIRDLPYGYDIL 236
Query: 274 LENLMDPAHIPISHD-------------RTDYSAKREDAQPLGFEVTERTDRGFAGQWGR 320
+ENLMDPAH+P +H R DY +E P+ ++ + GF R
Sbjct: 237 VENLMDPAHVPYAHKGIMRGIRKKEDPGRVDYD--KEGGGPVKMKIEQANIEGFVSPQER 294
Query: 321 EKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGT 380
+ +F APC + K + +F C P G G+S +I F
Sbjct: 295 -------GYFQFVAPCTFFGTPFVQEKKKAPR--VMLVFFCIPVGPGRSRVIWAF-PRNV 344
Query: 381 SPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT-KELYFNLRSIDTWVAEY 438
W+ + P W +H + + + D+ L + + + + S D V +
Sbjct: 345 GVWLHHITPRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPTSSDAMVVAF 404
Query: 439 RKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLAN 498
R W K G +T+ + ++P T L
Sbjct: 405 RNWFRKFCKNQ---VGWATLQVDQLPP------------------------TRTKDQLME 437
Query: 499 RYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQW-----RAFCLVSASL 553
RY+ HV+ C+ C +A+KA + +L A+ + + G RA + + L
Sbjct: 438 RYWSHVVQCRSCNAALKAMKALEAALQVASVAVVGFLAVAKGTVLTSTVQRAAVVSATVL 497
Query: 554 CLAGVYACSTAISMN 568
C A + I N
Sbjct: 498 CFAASRWLANFIQKN 512
>gi|89077587|gb|ABD60317.1| chloroplast pheophorbide a oxygenase PaO1 [Brassica napus]
Length = 538
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 232/521 (44%), Gaps = 89/521 (17%)
Query: 94 AVPTPDDHKVLVGPASE---EESRG---ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTV 147
+VPT D PA E EE G E +++ W + WYP+ L +D+ ++P +
Sbjct: 56 SVPTSD-------PAEESRIEEEHGGDKEEEGSEFKWRDHWYPVSLVEDLDPNSPTRFQL 108
Query: 148 FDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIP 205
+ +VL+ D + D CPHRLA LSEG+L + G L+C YHGW F G G C +IP
Sbjct: 109 LGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFAGCGSCTRIP 168
Query: 206 QLPADA------KIPRSACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFAR 254
Q K PR AC + SQG+++VW + P +LP ++F +
Sbjct: 169 QAATSGPEARAVKSPR-ACAIKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP--DDFDK 225
Query: 255 PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGF 314
P F V+ +L Y + L+EN+ DP+HI +H + + +R+ A+PL F+V GF
Sbjct: 226 PEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLPFKVESSGPWGF 283
Query: 315 AGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGK 368
G D +F APC N E +D K G + + +++C P GK
Sbjct: 284 QGA----NDDGPKITAKFVAPCYSLNKIE-IDAKLPIVGNQKWV--IWICSFNIPMAPGK 336
Query: 369 SMLIV-------RFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT 421
+ IV +F G + W ++ P WY H +++ V++ DM L Q +V L + + +
Sbjct: 337 TRSIVCSARNFFQFSVPGPA-WWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLSKSMES 395
Query: 422 KE---------LYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPA 472
+ L F D +V +R W+ + G P +FG + + P +P+ V
Sbjct: 396 PDYDVNKQYTKLTFTPTQADRFVLAFRNWLRRYGKSQPEWFGSTAANQP-LPSTV----- 449
Query: 473 GLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLT 532
+ + +R+ +H C C+ A F K L LL
Sbjct: 450 ------------------LTKREMLDRFEQHTQVCSSCKGAYNGFQIVKKFLVGTTVLLA 491
Query: 533 ALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFI 573
A A + + Q R LV A L L A + A+ NF+
Sbjct: 492 ATAGVPSDVQIR---LVLAGLALISA-ASAYALHEKEKNFV 528
>gi|356512495|ref|XP_003524954.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 529
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 209/502 (41%), Gaps = 82/502 (16%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDR 168
E E E +DW +WYPL D+ P G V +V++ D +G + H D
Sbjct: 68 EAEPEFESHAEKFDWYSQWYPLMPICDLDKRKPHGKRVLGIDVVVWWDRNEGAWQVHDDA 127
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEV 224
CPHRLA LS+G++ GRL+C+YHGW F G+G+C IPQ D + ACV Y
Sbjct: 128 CPHRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECQLIPQALPDGPPVHTSKKACVAAYPS 187
Query: 225 KESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILL 274
++W W PN D + P+ P + ++PY + +L+
Sbjct: 188 TVQNDILWFW------PNTDPQYKDIITRKRPPFIPEIDDPSYTKSMGNRDIPYGYEVLI 241
Query: 275 ENLMDPAHIPISH------DRTDYSAKREDAQPLGFEVTERTDRGFAGQ--WGREKDGSM 326
ENLMDPAH+P +H + A RE +PL + + GF+ WG+ K
Sbjct: 242 ENLMDPAHVPYAHYGLMRTPQPKVKADREGGRPLDMSIEKLDINGFSANQAWGKSK---- 297
Query: 327 PNFLRFEAPCVLQNNRESVDNKTGEKHYSTG------LFLCRPTGQGKSMLIVRFGTTGT 380
F PC+ +GE S+ +F+C P GKS LI F
Sbjct: 298 -----FMPPCIFYAYTPDQPASSGETKKSSAKKKMCLIFVCVPVSPGKSRLIWCFPRNFG 352
Query: 381 SPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT---KELYFNLRSIDTWVAE 437
K+ P W FH + + + D+ +L E LK+ P K + +S D V
Sbjct: 353 LWMDKIVPRWIFHVGQNLILDSDL-YLLHVEEHKLKDIGPNNWHKACFVPTKS-DALVIG 410
Query: 438 YRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLA 497
YR W+ K G + G + +LP P + L
Sbjct: 411 YRTWLRKYAGGQVDWRGKYSGALPPTPPREQ---------------------------LL 443
Query: 498 NRYFRHVIHCKGCRSAVKAFNTWKNSLS-TAAALLTALAILGAGRQWRAFCLVSASLCLA 556
+RY+ HV++CK C SA K+ N + L + A + +A++ G V+ +
Sbjct: 444 DRYWSHVVNCKSCNSAYKSLNAVEVMLQIISVASIGIVAVMKHGTM-----SVAKRNSMV 498
Query: 557 GVYACSTAISMNTTNFIRTHRR 578
+ S A+S +FI + R
Sbjct: 499 ALAVLSFALSRWLAHFIYKNFR 520
>gi|1935909|gb|AAC49676.1| lethal leaf-spot 1, partial [Zea mays]
Length = 467
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 215/465 (46%), Gaps = 80/465 (17%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCH 165
P++ GE+ + W + WYP+ L +D+ P + ++ +V++K+ K GE
Sbjct: 3 PSTSAPESGEK----FSWRDHWYPVSLVEDLDPSRPTPFQLLNRDLVIWKEPKSGEWVAL 58
Query: 166 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ-LPA--DAKIPRS--ACV 219
DRCPHRLA LSEG++ + G L+C YHGW F+G G C KIPQ +P +A+ RS AC
Sbjct: 59 DDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTKIPQAMPEGPEARAVRSPKACA 118
Query: 220 RTYEVKESQGVVWVW-----MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
+ SQG+++VW + P LP + F P F V+ +L Y + L+
Sbjct: 119 IKFPTLVSQGLLFVWPDENGWEKAAATKPPMLP--KEFEDPAFSTVTIQRDLFYGYDTLM 176
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEA 334
EN+ DP+HI +H + + +R+ A+PL F + G++G G+ FEA
Sbjct: 177 ENVSDPSHIEFAHHKV--TGRRDRARPLTFRMESSGAWGYSGA----NSGNPRITATFEA 230
Query: 335 PCVLQNNRESVDNKT---GEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTS 381
PC N E +D K G++ + +++C P GK+ IV +F G +
Sbjct: 231 PCYALNKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFTMPGKA 287
Query: 382 PWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE-----------LYFNLRS 430
W +L P WY H +++ V++ DM L Q ++ L TKE + F
Sbjct: 288 -WWQLVPRWYEHWTSNLVYDGDMIVLQGQEKIFL---AATKESSTDINQQYTKITFTPTQ 343
Query: 431 IDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGT 490
D +V +R W+ K G+ P +FG+ T +LP+
Sbjct: 344 ADRFVLAFRTWLRKFGNSQPEWFGNPT---------------------QEALPST----V 378
Query: 491 MHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALA 535
+ + +RY +H + C C+ A AF + A + A A
Sbjct: 379 LSKREMLDRYEQHTLKCSSCKGAYNAFQNLQKVFMGATVVCCAAA 423
>gi|162568916|gb|ABY19384.1| pheophorbide A oxygenase 1 [Nicotiana tabacum]
Length = 531
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 222/471 (47%), Gaps = 72/471 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ ++P + ++ +VL+ D + D+CPHRLA LSEG+
Sbjct: 78 FSWRDHWYPVSLVEDLDPNSPTPFQLLNRDLVLWFDKSNSQWVAFDDKCPHRLAPLSEGR 137
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRS--ACVRTYEVKESQGVVWVW 234
+ + G L+C YHGW F G G C +IPQ + +AK +S AC + SQG+++VW
Sbjct: 138 IDENGDLQCSYHGWSFNGCGSCTRIPQAASEGPEAKAVQSPRACATRFPTMVSQGLLFVW 197
Query: 235 MSQKT--PPNPDKLPWF-ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
+ K P E+F +P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 198 PDENAWERAQETKAPMLPEDFDKPEFATVTIQRDLFYGYDTLMENVSDPSHIEFAHHKV- 256
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL-RFEAPCVLQNNRESVDNK-- 348
+ +R+ A+PL F++ GFAG + P +F APC N E +D K
Sbjct: 257 -TGRRDRAKPLPFKMEASGPWGFAG-----ANNDKPKITAKFVAPCYSMNKIE-IDTKLP 309
Query: 349 -TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSAS 397
G++ + +++C P GK+ IV +F G + W ++FP W H +++
Sbjct: 310 IVGDQKWV--IWICSFNVPMAPGKTRSIVCSARNFFQFTVPGPA-WWQVFPRWQEHWTSN 366
Query: 398 KVFEQDMGFLSSQNEVLLKEKVPTK--------ELYFNLRSIDTWVAEYRKWMDKAGHGM 449
KV++ DM L Q ++ L + +L F D +V +R W+ + G+
Sbjct: 367 KVYDGDMIVLQGQEKIFLAKSKENSTDVNKEYTKLTFTPTQADRFVLAFRNWLRRHGNSQ 426
Query: 450 PYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKG 509
P +FG+ + P +P+ V + + +R+ +H + C
Sbjct: 427 PEWFGN--VDQPPLPSTV-----------------------LSKRQMMDRFEQHTLKCSS 461
Query: 510 CRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR----AFCLVSASLCLA 556
CR+A F + L A + A A + + + R +F ++SA L A
Sbjct: 462 CRNAYYTFERLQKILIGAVVVFCATAGIPSDIKLRVILASFAVLSAGLAYA 512
>gi|226505578|ref|NP_001147604.1| LOC100281213 [Zea mays]
gi|195612454|gb|ACG28057.1| pheophorbide a oxygenase [Zea mays]
Length = 525
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 203/495 (41%), Gaps = 74/495 (14%)
Query: 107 PASEEES---RGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGEL 162
P +EE+ GE R +DW ++WYPL D+ AP G TV +V + D G GE
Sbjct: 61 PRTEEQQPSPSGEER---FDWLDQWYPLAPVCDLDPRAPHGKTVLGLSVVAWYDRGAGEW 117
Query: 163 RCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSAC 218
R D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA AC
Sbjct: 118 RVFDDACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRAC 177
Query: 219 VRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSIL 273
V +Y ++W + + P + D L P P F V I +LPY + IL
Sbjct: 178 VASYPCVVQNNILWFY-PRADPEHSDVLQRKRPPLIPEIDDPDFVTVYGIRDLPYGYDIL 236
Query: 274 LENLMDPAHIPISHD-------------RTDYSAKREDAQPLGFEVTERTDRGFAGQWGR 320
+ENLMDPAH+P +H R DY +E P+ ++ + GF R
Sbjct: 237 VENLMDPAHVPYAHKGIMRGIRKKEDPGRVDYD--KEGGGPVKMKIEQANIEGFVSPQER 294
Query: 321 EKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGT 380
+ +F APC + + + +F C P G G+S +I F
Sbjct: 295 -------GYFQFVAPCTFFGTPFVQEGQKKKAPRVMLVFFCIPVGPGRSRVIWAF-PRNV 346
Query: 381 SPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT-KELYFNLRSIDTWVAEY 438
W+ + P W +H + + + D+ L + + + + S D V +
Sbjct: 347 GVWLHHITPRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPTSSDAMVVAF 406
Query: 439 RKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLAN 498
R W K G +T+ + ++P T L
Sbjct: 407 RNWFRKFCKNQ---VGWATLQVDQLPP------------------------TRTKDQLME 439
Query: 499 RYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQW-----RAFCLVSASL 553
RY+ V+ C+ C +A+KA + +L A+ + + G RA + + L
Sbjct: 440 RYWSXVVQCRSCNAALKAMKALEAALQVASVAVVGFLAVAKGTVLTSTVQRAAVVSATVL 499
Query: 554 CLAGVYACSTAISMN 568
C A + I N
Sbjct: 500 CFAASRWLANFIQKN 514
>gi|449452680|ref|XP_004144087.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 544
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 216/541 (39%), Gaps = 119/541 (21%)
Query: 75 KRTEPKLTKCHAVTDMSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLT 134
R P C A+T + S + + +V E GE R +DW +WYP+
Sbjct: 41 NRRNPIFNLC-AITSSTISTQESANPFQV-----DAESEPGEER---FDWYAQWYPIMPI 91
Query: 135 KDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQLID-GRLECLYHG 192
D+ P G TV +V++ D + + D CPHRLA LSEG++ GRL+C+YHG
Sbjct: 92 CDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHG 151
Query: 193 WQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD----- 244
W F G G C IPQ P D + ACV + V+W W PN D
Sbjct: 152 WCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFPSIVQNDVLWFW------PNSDPQYKD 205
Query: 245 -----KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH-------DRTDY 292
K P+ P F + + +LPY + IL ENLMDPAH+P +H +
Sbjct: 206 IMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYAHYGIMGRLPKNRE 265
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV-----------LQNN 341
A RE +P+ V + GF + GS +F APCV + +N
Sbjct: 266 KADREGGKPIDIVVKDFNINGFIAN---QDMGSS----QFFAPCVYCTSFSIPSKKINSN 318
Query: 342 RE-----------SVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDW 390
R+ +V T +K + +F+C P G GKS LI ++ P W
Sbjct: 319 RQDSGALLSGENNAVARNTSQKK-AMLIFMCIPVGPGKSRLIFVSLRNFAVSIDRIIPRW 377
Query: 391 YFHQSASKVFEQDMGFLSSQNEVLLKEK---------VPTKELYFNLRSIDTWVAEYRKW 441
FH + + + D+ L + +L VPTK D V +R+W
Sbjct: 378 IFHLGQNLILDSDLYLLHVEERKILDVGPSNWQKACFVPTKS--------DAKVVAFRRW 429
Query: 442 MDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYF 501
+++ + G ++ LP P+ L +RY+
Sbjct: 430 LNRYSDSQVDWRGKFSVILPPSPS---------------------------KEQLMDRYW 462
Query: 502 RHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQ------WRAFCLVSASLCL 555
HV++C C+ A K N + L + + +L I A +Q R LV A C
Sbjct: 463 SHVVNCSSCKVAYKGLNALEVVLQVIS--IASLGIFAATKQSFVSGAARVLMLVMAIFCF 520
Query: 556 A 556
A
Sbjct: 521 A 521
>gi|15230543|ref|NP_190074.1| pheophorbide a oxygenase [Arabidopsis thaliana]
gi|41688605|sp|Q9FYC2.1|PAO_ARATH RecName: Full=Pheophorbide a oxygenase, chloroplastic; Short=AtPaO;
Short=Pheide a oxygenase; AltName: Full=Accelerated cell
death 1; AltName: Full=Lethal leaf-spot 1 homolog;
Short=Lls1; Flags: Precursor
gi|9798391|emb|CAC03538.1| lethal leaf-spot 1 homolog Lls1 [Arabidopsis thaliana]
gi|20260386|gb|AAM13091.1| lethal leaf-spot 1 homolog Lls1 [Arabidopsis thaliana]
gi|332644443|gb|AEE77964.1| pheophorbide a oxygenase [Arabidopsis thaliana]
Length = 537
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 145/501 (28%), Positives = 225/501 (44%), Gaps = 78/501 (15%)
Query: 110 EEESRG--ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQ 166
EEE G E +++ W + WYP+ L +D+ + P + + +VL+ D +
Sbjct: 68 EEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFD 127
Query: 167 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACV 219
D CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ K PR AC
Sbjct: 128 DLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPR-ACA 186
Query: 220 RTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
+ SQG+++VW + P +LP ++F +P F V+ +L Y + L+
Sbjct: 187 IKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP--DDFDKPEFSTVTIQRDLFYGYDTLM 244
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEA 334
EN+ DP+HI +H + + +R+ A+PL F+V GF G D S +F A
Sbjct: 245 ENVSDPSHIDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQG----ANDDSPRITAKFVA 298
Query: 335 PCVLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTS 381
PC N E +D K G + + +++C P GK+ IV +F G +
Sbjct: 299 PCYSMNKIE-LDAKLPIVGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPA 355
Query: 382 PWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE---------LYFNLRSID 432
W ++ P WY H +++ V++ DM L Q +V L + + + + L F D
Sbjct: 356 -WWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQAD 414
Query: 433 TWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMH 492
+V +R W+ + G P +FG ST S +P+ V +
Sbjct: 415 RFVLAFRNWLRRHGKSQPEWFG-STPSNQPLPSTV-----------------------LT 450
Query: 493 APNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSAS 552
+ +R+ +H C C+ A +F K L A A A + + Q R LV A
Sbjct: 451 KRQMLDRFDQHTQVCSSCKGAYNSFQILKKFLVGATVFWAATAGVPSDVQIR---LVLAG 507
Query: 553 LCLAGVYACSTAISMNTTNFI 573
L L A + A+ NF+
Sbjct: 508 LSLISA-ASAYALHEQEKNFV 527
>gi|312281805|dbj|BAJ33768.1| unnamed protein product [Thellungiella halophila]
Length = 540
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 219/487 (44%), Gaps = 76/487 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ + P + + +VL+ D + D CPHRLA LSEG+
Sbjct: 85 FKWRDHWYPVSLVEDLDPNVPTRFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGR 144
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVWV 233
L +G L+C YHGW F G G C +IPQ K PR AC + SQG+++V
Sbjct: 145 LDENGHLQCSYHGWSFSGCGSCTRIPQASTSGPEARAVKSPR-ACAIKFPTMVSQGLLFV 203
Query: 234 WMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
W + +P +LP ++F +P F V+ +L Y + L+EN+ DP+HI +H
Sbjct: 204 WPDENGWDRANSIDPPRLP--DDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHH 261
Query: 289 RTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK 348
+ + +R+ A+PL F+V GF G D + +F APC N E +D K
Sbjct: 262 KV--TGRRDRAKPLPFKVESSGPWGFQG----ANDDNPRITAKFVAPCYSLNKIE-IDAK 314
Query: 349 T---GEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQS 395
G + + +++C P GK+ IV +F G + W ++ P WY H +
Sbjct: 315 LPIFGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPA-WWQVVPRWYEHWT 371
Query: 396 ASKVFEQDMGFLSSQNEVLLKEKVPTKE---------LYFNLRSIDTWVAEYRKWMDKAG 446
++ V++ DM L Q +V L + + + + L F D +V +R W+ + G
Sbjct: 372 SNLVYDGDMIVLQGQEKVFLSKSMDSPDYDVNKEYTKLTFTPTQADRFVLAFRNWLRRHG 431
Query: 447 HGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIH 506
P +FG + + P +P+ V + + +R+ +H
Sbjct: 432 KSQPDWFGSTAANQP-LPSTV-----------------------LTKREMLDRFEQHTQV 467
Query: 507 CKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAIS 566
C C+ A K F T K L A A + + Q R LV A L L A + A+
Sbjct: 468 CSSCKGAYKGFQTLKKFLVGTTVFFAATAGVPSDVQIR---LVLAGLALISA-ASAYALH 523
Query: 567 MNTTNFI 573
NF+
Sbjct: 524 EKENNFV 530
>gi|89077585|gb|ABD60316.1| chloroplast pheophorbide a oxygenase PaO2 [Brassica napus]
Length = 535
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 218/487 (44%), Gaps = 76/487 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ ++P + + +VL+ D + D CPHRLA LSEG+
Sbjct: 80 FKWRDHWYPVSLVEDLDPNSPTRFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGR 139
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVWV 233
L +G L+C YHGW F G G C KIPQ K PR AC + SQG+++V
Sbjct: 140 LDENGHLQCSYHGWSFAGCGSCTKIPQAATSGPEARAVKSPR-ACAIKFPTMVSQGLLFV 198
Query: 234 WMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
W + P +LP ++F +P F V+ +L Y + L+EN+ DP+HI +H
Sbjct: 199 WPDENGWDRANSIQPPRLP--DDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHH 256
Query: 289 RTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK 348
+ + +R+ A+PL F+V GF G D S +F APC N E +D K
Sbjct: 257 KV--TGRRDRAKPLPFKVESGGPWGFQG----ANDDSPKITAKFVAPCYSLNKIE-IDAK 309
Query: 349 ---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQS 395
G + + +++C P GK+ IV +F G + W ++ P WY H +
Sbjct: 310 LPIVGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPA-WWQVVPRWYEHWT 366
Query: 396 ASKVFEQDMGFLSSQNEVLLKEKVPTKE---------LYFNLRSIDTWVAEYRKWMDKAG 446
++ V++ DM L Q +V L + + + + L F D +V +R W+ + G
Sbjct: 367 SNLVYDGDMIVLQGQEKVFLSKSMESPDYDVNKQYTKLTFTPTQADRFVLAFRNWLRRYG 426
Query: 447 HGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIH 506
P +FG + + P +P+ V + + +R+ +H
Sbjct: 427 KSQPEWFGSTAANQP-LPSTV-----------------------LTKREMLDRFEQHTQV 462
Query: 507 CKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAIS 566
C C+ A F K L L A A + + Q R LV A L L A + A+
Sbjct: 463 CSSCKGAYNGFQIVKKFLVGTTVFLAATAGVPSDVQIR---LVLAGLALISA-ASAYALH 518
Query: 567 MNTTNFI 573
NF+
Sbjct: 519 EKEKNFV 525
>gi|37962886|gb|AAR05797.1| accelerated cell death 1 [Arabidopsis thaliana]
Length = 537
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 145/501 (28%), Positives = 225/501 (44%), Gaps = 78/501 (15%)
Query: 110 EEESRG--ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQ 166
EEE G E +++ W + WYP+ L +D+ + P + + +VL+ D +
Sbjct: 68 EEEYGGDKEEEGSEFKWRDHWYPVSLVEDLVPNVPTPFQLLGRDLVLWFDRNDQKWAAFD 127
Query: 167 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACV 219
D CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ K PR AC
Sbjct: 128 DLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPR-ACA 186
Query: 220 RTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
+ SQG+++VW + P +LP ++F +P F V+ +L Y + L+
Sbjct: 187 IKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP--DDFDKPEFSTVTIQRDLFYGYDTLM 244
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEA 334
EN+ DP+HI +H + + +R+ A+PL F+V GF G D S +F A
Sbjct: 245 ENVSDPSHIDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQG----ANDDSPRITAKFVA 298
Query: 335 PCVLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTS 381
PC N E +D K G + + +++C P GK+ IV +F G +
Sbjct: 299 PCYSMNKIE-LDAKLPIVGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPA 355
Query: 382 PWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE---------LYFNLRSID 432
W ++ P WY H +++ V++ DM L Q +V L + + + + L F D
Sbjct: 356 -WWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQAD 414
Query: 433 TWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMH 492
+V +R W+ + G P +FG ST S +P+ V +
Sbjct: 415 RFVLAFRNWLRRHGKSQPEWFG-STPSNQPLPSTV-----------------------LT 450
Query: 493 APNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSAS 552
+ +R+ +H C C+ A +F K L A A A + + Q R LV A
Sbjct: 451 KRQMLDRFDQHTQVCSSCKGAYNSFQILKKFLVGATVFWAATAGVPSDVQIR---LVLAG 507
Query: 553 LCLAGVYACSTAISMNTTNFI 573
L L A + A+ NF+
Sbjct: 508 LSLISA-ASAYALHEQEKNFV 527
>gi|255565489|ref|XP_002523735.1| pheophorbide A oxygenase, putative [Ricinus communis]
gi|223537039|gb|EEF38675.1| pheophorbide A oxygenase, putative [Ricinus communis]
Length = 531
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 233/516 (45%), Gaps = 82/516 (15%)
Query: 82 TKCHAVTDMSSSAVPTP-----DDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKD 136
T+ + ++ + +A P+P ++++V ++ES E + + W + WYP+ L +D
Sbjct: 40 TRTYKLSPLHVAAPPSPSVEKEEEYRV------DDESGQESVDSKFSWRDHWYPVSLVED 93
Query: 137 VPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQ 194
+ P + + +VL+ D E D+CPHRLA LSEG++ + G L+C YHGW
Sbjct: 94 LDPGLPTPFQLLGRDLVLWFDTTNQEWVALDDKCPHRLAPLSEGRIDENGHLQCSYHGWS 153
Query: 195 FEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVWVWMSQK-----TPPNP 243
F+G G C +IPQ + K PR AC + SQG+++VW + P
Sbjct: 154 FDGCGSCTRIPQAMPEGPEARAVKSPR-ACATRFPTMVSQGLLFVWPDENGWERARASKP 212
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
LP +NF +P F V+ +L Y + L+EN+ DP+HI +H + + +R+ A+PL
Sbjct: 213 PMLP--DNFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLA 268
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK---TGEKHYSTGLFL 360
F++ GFAG +G+ +F APC N E +D K G++ + +++
Sbjct: 269 FKLEGSGPWGFAG----ANEGNPRISAKFVAPCYYINKIE-IDTKLPIVGDQKWV--IWI 321
Query: 361 CR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
C P GK+ IV +F G + W ++ P W+ H +++KV++ DM L Q
Sbjct: 322 CSFNVPMAPGKTRSIVCSARNFLQFTMPGPA-WWQVVPRWHEHWTSNKVYDGDMIVLQGQ 380
Query: 411 NEVLL---KEKVPTKELY----FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
++ L KE E Y F D +V +R W+ + G+ P +F
Sbjct: 381 EKIFLSESKEGSNVNEQYTKLTFTPTQADRFVLAFRNWLRRHGNSQPEWFSFDG------ 434
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNS 523
LP+ + + +R+ +H C CR A AF T +
Sbjct: 435 ---------------QQPLPST----ILSKRQMLDRFEQHTNKCSSCRKAYTAFRTLQKL 475
Query: 524 LSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVY 559
L A +A A + + R A L VY
Sbjct: 476 LIGATVAFSATAGIPSDLNLRIILAGLAILSAVSVY 511
>gi|359478456|ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Vitis vinifera]
Length = 532
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 228/564 (40%), Gaps = 115/564 (20%)
Query: 54 PFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMSSSAVPTPDDHKVLVGPASEEES 113
PF + PT+ + PI+ R R VT +SS+ P V P E E
Sbjct: 26 PFRSVPTS--IFPPIRQCTARSRV---------VTAVSSTVSTEP------VNPV-EPEV 67
Query: 114 RGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHR 172
+ + ++W +WYP+ D+ P V +V++ D + + D CPHR
Sbjct: 68 QSHSQEEKFNWLLQWYPVMPVCDLDKRIPHAKKVIGLDVVVWWDRNENAWKVFDDMCPHR 127
Query: 173 LAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQ 228
LA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV Y
Sbjct: 128 LAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKACVSVYPSTVQN 187
Query: 229 GVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILLENLM 278
+VW W PN D K P+ P + + E+PY + +L+ENLM
Sbjct: 188 DIVWFW------PNTDPQYKDILMKNKPPYIPELDDPSYTRLMGNREIPYGYEVLIENLM 241
Query: 279 DPAHIPISH--------DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL 330
DPAH+P +H + A RE +PL ++ + GF G+ ++G F+
Sbjct: 242 DPAHVPYAHYGIMTVPSQKKRVKADREGGRPLEMKIQKLDRSGFIGK----QEGGTSKFI 297
Query: 331 RFEAPCVL-----------QNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTG 379
PCV + SV+ K + +F+C P G S LI F
Sbjct: 298 ---PPCVFYVSSDLFIDKTNGSASSVETKKEVQRRMLLIFICIPVSPGNSRLIWTF-PRN 353
Query: 380 TSPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEK---------VPTKELYFNLR 429
W+ ++ P W FH + + + D+ L + ++ VPTK
Sbjct: 354 FGVWVDRVVPRWMFHVGQNLILDSDLYLLHVEERKIMDIGPSNWQKACFVPTKS------ 407
Query: 430 SIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIG 489
D V +RKW++K G + + +LP P
Sbjct: 408 --DACVVGFRKWLNKYAGGQVDWGTKFSGALPPTPP------------------------ 441
Query: 490 TMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLV 549
L +RY+ HV++C CR A+K N + L + + ++ I+ A +Q + V
Sbjct: 442 ---REQLMDRYWSHVVNCSSCRVAIKGLNALEVVLQVIS--VASIGIVAATKQ--SLMSV 494
Query: 550 SASLCLAGVYACSTAISMNTTNFI 573
+A L + A S ++FI
Sbjct: 495 AARTALVSMAVICFAASRWLSHFI 518
>gi|255585393|ref|XP_002533392.1| pheophorbide A oxygenase, putative [Ricinus communis]
gi|223526766|gb|EEF28992.1| pheophorbide A oxygenase, putative [Ricinus communis]
Length = 552
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 197/472 (41%), Gaps = 83/472 (17%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCH 165
P E + +G++ +DW WYP+ D+ P V +V++ D + E R
Sbjct: 85 PELETDIQGDK----FDWYSAWYPVMPVCDLDKRVPHAKKVLGIDVVVWWDRNENEWRVF 140
Query: 166 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRT 221
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ PAD ACV
Sbjct: 141 DDTCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKYIPQAPADGPPVHTFNKACVAA 200
Query: 222 YEVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHS 271
Y ++W W PN D K P+ P + ++PY +
Sbjct: 201 YPSTVHHDILWFW------PNTDPQYKDILMKEKPPFIPELDDPSYTKTMGNRDIPYGYD 254
Query: 272 ILLENLMDPAHIPISH------DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGS 325
L+ENLMDPAH+P +H + RE +P+ V + GF G+ +EK S
Sbjct: 255 FLIENLMDPAHVPYAHYGLMKIRQPKEKVDREGGKPIDMSVKKLDKNGFIGK--QEKGSS 312
Query: 326 MPNFLRFEAPCVL---------QNNRESVDNKTGEK----HYSTGLFLCRPTGQGKSMLI 372
+F APC+ Q N ++T +K + +F+C P G S LI
Sbjct: 313 -----KFIAPCIFYAYTDPLVDQGNGAVSSSETKKKLSVQQRAALVFICIPVSPGNSRLI 367
Query: 373 VRFGTTGTSPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT-KELYFNLRS 430
F WI K+FP W FH + + + D+ L + + V ++ F
Sbjct: 368 WAF-PRNFGVWIDKIFPRWMFHVGQNLILDSDLYLLHVEERKITDIGVANWQKACFVPTK 426
Query: 431 IDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGT 490
D V +RKW++ G + G +LP P +
Sbjct: 427 SDALVVGFRKWLNNYAGGQVDWRGKYNGALPPTPPREQ---------------------- 464
Query: 491 MHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQ 542
L +RY+ HV++C C +A K N + L + +L + I+ A +Q
Sbjct: 465 -----LMDRYWSHVVNCSSCNAAHKGLNALEVILQVVSLVL--IGIVAAAKQ 509
>gi|162568918|gb|ABY19385.1| pheophorbide A oxygenase 2 [Nicotiana tabacum]
Length = 531
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 221/473 (46%), Gaps = 76/473 (16%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQ 180
+ W + WYP+ L +D+ + P + ++ +VL+ D + D+CPHRLA LSEG+
Sbjct: 78 FSWRDHWYPVSLAEDLDPNLPTPFQLLNRDLVLWFDKSSSQWVAFDDKCPHRLAPLSEGR 137
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRS--ACVRTYEVKESQGVVWVW 234
+ + G L+C YHGW F G G C +IPQ + +AK +S AC + SQG+++VW
Sbjct: 138 IDENGDLQCSYHGWSFNGCGSCTRIPQAASEGPEAKAVQSPRACATRFPTMVSQGLLFVW 197
Query: 235 MSQKT-----PPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ P LP E+F +P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 198 PDENAWERAQATKPPMLP--EDFDKPEFATVTIQRDLFYGYDTLMENVSDPSHIDFAHHK 255
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL-RFEAPCVLQNNRESVDNK 348
+ +R+ A+PL F++ GFAG + P +F APC N E +D K
Sbjct: 256 V--TGRRDRAKPLPFKMEASGPWGFAG-----ANNDKPKITAKFVAPCYSMNKIE-IDTK 307
Query: 349 ---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQS 395
G++ + +++C P GK+ IV +F G + W ++FP W H +
Sbjct: 308 LPIVGDQKWV--IWICSFNVPMAPGKTRSIVCSARNFFQFTVPGPA-WWQVFPRWQEHWT 364
Query: 396 ASKVFEQDMGFLSSQNEVLLKEKVPTK--------ELYFNLRSIDTWVAEYRKWMDKAGH 447
++KV++ DM L Q ++ L + +L F D +V +R W+ + G+
Sbjct: 365 SNKVYDGDMIVLQGQEKIFLAKSKENSTDVNKEYTKLTFTPTQADRFVLAFRNWLRRHGN 424
Query: 448 GMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHC 507
P +FG+ V+ P LP+ + + +R+ +H + C
Sbjct: 425 SQPEWFGN-----------VDQQP----------LPST----VLSKRQMMDRFEQHTLKC 459
Query: 508 KGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR----AFCLVSASLCLA 556
CR+A F L A + A A + + + R +F ++SA L A
Sbjct: 460 SSCRNAYYTFERLHKILIGAVVVFCATAGVPSDIKLRVILASFAILSAGLAYA 512
>gi|125546114|gb|EAY92253.1| hypothetical protein OsI_13973 [Oryza sativa Indica Group]
Length = 556
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 142/526 (26%), Positives = 209/526 (39%), Gaps = 101/526 (19%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD--------G 158
P +E+ + +DW ++WYP+ D+ AP G TV +IV + D G
Sbjct: 57 PRAEDAPSASGKEERFDWLDQWYPVAPVCDLDPGAPHGKTVLGLRIVAWFDRTTAAADGG 116
Query: 159 KGELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIP 214
GE R D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA
Sbjct: 117 GGEWRVFDDSCPHRLAPLSEGRVDDKGRLQCVYHGWCFDGRGACQFIPQAPALGPAVHKN 176
Query: 215 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYD 269
ACV +Y ++W + + P + L P+ P F V + +LPY
Sbjct: 177 SKACVASYPCVVQNNILWFY-PRSEPEYKEILQRKRPPYIPQIDDPSFVTVYGVRDLPYG 235
Query: 270 HSILLENLMDPAHIPISHDRTDYSAKRED------------------AQPLGFEVTERTD 311
+ +L+ENLMDPAH+P +H + K+ED PL E+ E
Sbjct: 236 YDVLVENLMDPAHVPYAHKGLMRTRKKEDPGRYNIHLLYTVEFDKEGGGPLKMEIEETNV 295
Query: 312 RGFAGQWGREKDGSMPNFLRFEAPCVLQNN-----------------RESVDNKTGEKHY 354
GF R F +F APC + + S+D++ EK
Sbjct: 296 EGFLSMLDR-------GFFKFVAPCTFYGSPLQTPSQALFKLIEPSYKISIDDQGKEKKK 348
Query: 355 STG----LFLCRPTGQGKSMLIVRFGTTGTSPWI-KLFPDWYFHQSASKVFEQDMGFL-- 407
+FLC P G+S L+ F W+ K+ P WY+H + + + D+ L
Sbjct: 349 KQPTVMLVFLCIPVSPGRSRLVWAF-PRNVGVWMDKIIPRWYYHIGQNAILDSDIYLLHI 407
Query: 408 SSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVV 467
+N + K Y S D + +R W K Y H
Sbjct: 408 EERNFATVGLDNWQKACYVPTSS-DNMIITFRNWFRK-------YCKHQI---------- 449
Query: 468 EHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTA 527
G ++ LP T L +RY+ HV+ C C A+K + +L A
Sbjct: 450 -----GWATPITNQLPP-----TPSKDQLLDRYWSHVMQCTSCSGALKKMKALEVALQVA 499
Query: 528 AALLTALAILGAGR-----QWRAFCLVSASLCLAGVYACSTAISMN 568
+ + + G R+ + +A LC A + I N
Sbjct: 500 SVAVVGFLAVAKGTVVTSVVQRSAVVAAAVLCFAASRWLANFIEKN 545
>gi|225436442|ref|XP_002274210.1| PREDICTED: pheophorbide a oxygenase, chloroplastic [Vitis vinifera]
gi|297734893|emb|CBI17127.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 213/474 (44%), Gaps = 70/474 (14%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSE 178
+ + W + WYP+ L +D+ + P + + IVL+KD E D+CPHRLA LSE
Sbjct: 84 SKFLWRDHWYPVSLIEDLDTNRPTPFQLLGRDIVLWKDKSTAEWVAFDDKCPHRLAPLSE 143
Query: 179 GQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVW 232
G++ + G L+C YHGW F+ G C +IPQ + R+ AC + SQG+++
Sbjct: 144 GRIDENGYLQCSYHGWSFDKCGSCKRIPQALPEGPEARAVGSPRACATRFPTMVSQGLLF 203
Query: 233 VWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
VW + + P LP + F P F V+ +L Y + L+EN+ DP+HI +H
Sbjct: 204 VWPDENGWERASATKPPMLP--DEFENPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAH 261
Query: 288 DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDN 347
+ + +R+ A+PL F++ GFAG DG+ +F APC N E +D
Sbjct: 262 HKV--TGRRDRAKPLPFKLESSGPGGFAGA----NDGNPRISAKFVAPCYYMNKIE-IDT 314
Query: 348 K---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQ 394
K GE+ + +++C P GK+ IV +F G + W ++ P W+ H
Sbjct: 315 KLPIVGEQKWK--IWICSFNVPMAPGKTRSIVCSARNFFQFSMPGPA-WWQVVPRWHEHW 371
Query: 395 SASKVFEQDMGFLSSQNEVLLKEK----VPTKELY----FNLRSIDTWVAEYRKWMDKAG 446
+++KV++ DM L Q ++ L + E Y F D +V +R W+ + G
Sbjct: 372 TSNKVYDGDMIVLQGQEKIFLSKSKEGSADVNEQYTQITFTPTQSDRFVLAFRNWLRRHG 431
Query: 447 HGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIH 506
+ P +FG S LP+ + + +R+ +H ++
Sbjct: 432 NSQPDWFGISN---------------------QGPLPST----VLSKRQMLDRFEQHTLN 466
Query: 507 CKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYA 560
C C+ A F T + AA + A + + R A L A YA
Sbjct: 467 CSSCKGAYTTFQTMQKLFIGAAVVFCATTGIPSEMWIRVILAGLALLSSALAYA 520
>gi|226434019|gb|ACO56118.1| pheide a oxyganase [Vitis vinifera]
Length = 539
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 213/474 (44%), Gaps = 70/474 (14%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSE 178
+ + W + WYP+ L +D+ + P + + IVL+KD E D+CPHRLA LSE
Sbjct: 84 SKFLWRDHWYPVSLIEDLDTNRPTPFQLLGRDIVLWKDKSTAEWVAFDDKCPHRLAPLSE 143
Query: 179 GQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVW 232
G++ + G L+C YHGW F+ G C +IPQ + R+ AC + SQG+++
Sbjct: 144 GRIDENGYLQCSYHGWSFDKCGSCKRIPQALPEGPEARAVGSPRACATRFPTMVSQGLLF 203
Query: 233 VWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
VW + + P LP + F P F V+ +L Y + L+EN+ DP+HI +H
Sbjct: 204 VWPDENGWERASATKPPMLP--DVFENPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAH 261
Query: 288 DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDN 347
+ + +R+ A+PL F++ GFAG DG+ +F APC N E +D
Sbjct: 262 HKV--TGRRDRAKPLPFKLESSGPGGFAGA----NDGNPRISAKFVAPCYYMNKIE-IDT 314
Query: 348 K---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPDWYFHQ 394
K GE+ + +++C P GK+ IV +F G + W ++ P W+ H
Sbjct: 315 KLPIVGEQKWK--IWICSFNVPMAPGKTRSIVCSARNFFQFSMPGPA-WWQVVPRWHEHW 371
Query: 395 SASKVFEQDMGFLSSQNEVLLKEK----VPTKELY----FNLRSIDTWVAEYRKWMDKAG 446
+++KV++ DM L Q ++ L + E Y F D +V +R W+ + G
Sbjct: 372 TSNKVYDGDMIVLQGQEKIFLSKSKEGSADVNEQYTQITFTPTQSDRFVLAFRNWLRRHG 431
Query: 447 HGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIH 506
+ P +FG S LP+ + + +R+ +H ++
Sbjct: 432 NSQPDWFGISN---------------------QGPLPST----VLSKRQMLDRFEQHTLN 466
Query: 507 CKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYA 560
C C+ A F T + AA + A + + R A L A YA
Sbjct: 467 CSSCKGAYTTFQTMQKLFIGAAVVFCATTGIPSEMWIRVILAGLALLSSALAYA 520
>gi|449452795|ref|XP_004144144.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 481
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 149/501 (29%), Positives = 217/501 (43%), Gaps = 94/501 (18%)
Query: 108 ASEEESRGERRVAD---YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELR 163
AS++ ERR + +DW EWYP+ D+ P+G V +V++ D + +
Sbjct: 2 ASDDVVTSERRKMEEEKFDWFSEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWK 61
Query: 164 CHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACV 219
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + AC
Sbjct: 62 VFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACA 121
Query: 220 RTYEVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYD 269
Y G+VW W PN D K P+ P + + ++ Y
Sbjct: 122 AVYPSTTQNGIVWFW------PNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYG 175
Query: 270 HSILLENLMDPAHIPISHDRT------DYSAKREDAQPLGFEVTERTDRGFAGQWGREKD 323
+ +L+ENLMD AH+P +H ++ RE +PL V + GF G KD
Sbjct: 176 YEVLIENLMDLAHLPYAHYGIMPAPPPMKNSDRERGRPLEMVVEKLKADGFVG-----KD 230
Query: 324 GSMPNFLRFEAPCV---------LQNNRESVDNKT---------GEKHYSTGL-FLCRPT 364
++ + +F APCV +Q N ES + + E T L F C P
Sbjct: 231 ETLRH--KFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANKPPTEISRRTFLAFFCIPV 288
Query: 365 GQGKSMLIVRFGTTGTSPWIK-LFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT-- 421
GKS LI F W+ + P W FH + + + DM +L E +E P+
Sbjct: 289 SPGKSRLIWAF-PINLDKWVHFIVPRWIFHIVQNLILDSDM-YLLHVEEHKYEEIGPSNW 346
Query: 422 -KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSA 480
K Y ++S D +V +R+W++K G + G + SLP + +P LV
Sbjct: 347 HKACYVPVKS-DAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSL------SPRALV----- 394
Query: 481 SLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLST-AAALLTALAILGA 539
RY+ HV++CK C A KA N + SL + A + LA+
Sbjct: 395 ----------------LERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQN 438
Query: 540 G---RQWRAFCLVSASLCLAG 557
G + RA + A +C A
Sbjct: 439 GVISAKVRATIFIIAIVCFAA 459
>gi|357518865|ref|XP_003629721.1| Pheophorbide a oxygenase [Medicago truncatula]
gi|355523743|gb|AET04197.1| Pheophorbide a oxygenase [Medicago truncatula]
Length = 532
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 205/500 (41%), Gaps = 78/500 (15%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDR 168
++E E +DW +WYPL D+ AP V +V++ D + + D
Sbjct: 43 DDEPEVETGSEKFDWYSQWYPLMPICDLDKRAPHAKKVMGIDVVIWWDRNESAWQVFDDA 102
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEV 224
CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P + + ACV Y
Sbjct: 103 CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACVAAYPS 162
Query: 225 KESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
++W W +++KTP P+ P F ++PY + +L+
Sbjct: 163 TVQNDILWFWPNTDPQYKDIITRKTP------PFIPEIDDPSFTSFMGNRDIPYGYEVLV 216
Query: 275 ENLMDPAHIPISH-----DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPN- 328
ENLMDP+H+P +H D +A RE PL F V E GF G K MP
Sbjct: 217 ENLMDPSHVPYAHYGLTPDPKGNNADREGGTPLDFSVEELDINGFTANQGWNKSKFMPPS 276
Query: 329 -FLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF 387
F + P L ++ E+ + +K + +F+C P GKS LI F K+
Sbjct: 277 IFYLYSEPDKLASSVETKKSSVQKKF--SMIFICIPVSPGKSRLIWCFPRNFGVWADKIV 334
Query: 388 PDWYFHQSASKVFEQDMGFLSSQNEVLLKEK---------VPTKELYFNLRSIDTWVAEY 438
P W H + + + D+ L + + ++ VPTK D V +
Sbjct: 335 PRWILHMGQNLILDSDLYLLHVEEQKIMDVGQGNWHKACFVPTKA--------DALVIGF 386
Query: 439 RKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLAN 498
RKW+ K + G + +LP P L +
Sbjct: 387 RKWLKKYAGDQVDWRGKYSGALPPTPP---------------------------REQLMD 419
Query: 499 RYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGV 558
RY+ H ++CK C A K+ N + L + + ++ + +Q S+ + +
Sbjct: 420 RYWSHTVNCKSCNFAYKSLNVVEVMLQIIS--VASIGFVATMKQGIVSAATRNSIVVLAI 477
Query: 559 YACSTAISMNTTNFIRTHRR 578
S A+S +FI + R
Sbjct: 478 --LSFALSRLLAHFIYKNFR 495
>gi|1935914|gb|AAC49679.1| lethal leaf-spot 1 homolog, partial [Arabidopsis thaliana]
Length = 539
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 221/493 (44%), Gaps = 76/493 (15%)
Query: 116 ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLA 174
E +++ W + WYP+ L +D+ + P + + +VL+ D + D CPHRLA
Sbjct: 78 EEEGSEFKWRDHWYPVSLVEDLVPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLA 137
Query: 175 KLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKES 227
LSEG+L +G L+C YHGW F G G C +IPQ K PR AC + S
Sbjct: 138 PLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPR-ACAIKFPTMVS 196
Query: 228 QGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
QG+++VW + P +LP ++F +P F V+ +L Y + L+EN+ DP+H
Sbjct: 197 QGLLFVWPDENGWDRANSIEPPRLP--DDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSH 254
Query: 283 IPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNR 342
I +H + + +R+ A+PL F+V GF G D S +F APC N
Sbjct: 255 IDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQG----ANDDSPRITAKFVAPCYSMNKI 308
Query: 343 ESVDNK---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPWIKLFPD 389
E +D K G + + +++C P GK+ IV +F G + W ++ P
Sbjct: 309 E-LDAKLPIVGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPA-WWQVVPR 364
Query: 390 WYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE---------LYFNLRSIDTWVAEYRK 440
WY H +++ V++ DM L Q +V L + + + + L F D +V +R
Sbjct: 365 WYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQADRFVLAFRN 424
Query: 441 WMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRY 500
W+ + G P +FG ST S +P+ V + + +R+
Sbjct: 425 WLRRHGKSQPEWFG-STPSNQPLPSTV-----------------------LTKRQMLDRF 460
Query: 501 FRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYA 560
+H C C+ A +F K L A A A + + Q R LV A L L A
Sbjct: 461 DQHTQVCSSCKGAYNSFQILKKFLVGATVFWAATAGVPSDVQIR---LVLAGLSLISA-A 516
Query: 561 CSTAISMNTTNFI 573
+ A+ NF+
Sbjct: 517 SAYALHEQEKNFV 529
>gi|1935912|gb|AAC49678.1| lethal leaf-spot 1 [Zea mays]
Length = 505
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 218/480 (45%), Gaps = 82/480 (17%)
Query: 94 AVPT--PDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQ 151
A PT P + P++ GE+ + W + WYP+ L +D+ P + ++
Sbjct: 41 AAPTSVPGEAAEQAEPSTSAPESGEK----FSWRDHWYPVSLVEDLDPSRPTPFQLLNRD 96
Query: 152 IVLYKDGK-GELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ-LP 208
+V++K+ K GE DRCPHRLA LSEG++ + G L+C YHGW F+G G C KIPQ +P
Sbjct: 97 LVIWKEPKSGEWVALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTKIPQAMP 156
Query: 209 A--DAKIPRS--ACVRTYEVKESQGVVWVW-----MSQKTPPNPDKLPWFENFARPGFQD 259
+A+ RS AC + SQG+++VW + P LP + F P F
Sbjct: 157 EGPEARAVRSPKACAIKFPTLVSQGLLFVWPDENGWEKAAATKPPMLP--KEFEDPAFST 214
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWG 319
V+ +L Y + L+EN+ DP+HI +H + + +R+ A+PL F + G++G
Sbjct: 215 VTIQRDLFYGYDTLMENVSDPSHIEFAHHKV--TGRRDRARPLTFRMESSGAWGYSGA-- 270
Query: 320 REKDGSMPNFLRFEAPCVLQNNRESVDNKT---GEKHYSTGLFLCR---PTGQGKSMLIV 373
G+ FEAPC N E +D K G++ + +++C P GK+ IV
Sbjct: 271 --NSGNPRITATFEAPCYALNKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIV 325
Query: 374 -------RFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE--- 423
+F G + W +L P WY H +++ V++ DM L Q ++ L TKE
Sbjct: 326 CSARNFFQFTMPGKA-WWQLVPRWYEHWTSNLVYDGDMIVLQGQEKIFL---AATKESST 381
Query: 424 --------LYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLV 475
+ F D +V R W+ K G+ P +FG+ T
Sbjct: 382 DINQQYTKITFTPTQADRFVLACRTWLRKFGNSQPEWFGNPT------------------ 423
Query: 476 AGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALA 535
+LP+ + + +RY + + C C+ A AF + A + A A
Sbjct: 424 ---QEALPST----VLSKREMLDRYEQLSLKCSSCKGAYNAFQNLQKVFMGATVVCCAAA 476
>gi|350537085|ref|NP_001234535.1| lethal leaf spot 1-like protein [Solanum lycopersicum]
gi|16973465|gb|AAL32300.1|AF321984_1 lethal leaf spot 1-like protein [Solanum lycopersicum]
Length = 537
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 224/482 (46%), Gaps = 76/482 (15%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQDR 168
+ E+ + + + W + WYP+ L +D+ P + ++ IV++ D G + D+
Sbjct: 72 DTENDEQDSSSKFSWRDHWYPVSLVEDLDPSLPTPFQLLNRDIVIWFDKSGSQWVALDDK 131
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRS--ACVRTY 222
CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ + +AK +S AC +
Sbjct: 132 CPHRLAPLSEGRLDENGDLQCSYHGWSFNGCGSCTRIPQAASQGPEAKAFQSPRACATRF 191
Query: 223 EVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 277
SQG+++VW + P LP E+F +P F V+ +L Y + L+EN+
Sbjct: 192 PTMVSQGLLFVWPDENGWERAQATKPPMLP--EDFDKPEFATVTIQRDLFYGYDTLMENV 249
Query: 278 MDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL-RFEAPC 336
DP+HI +H + + +R+ A+PL F++ GFAG + P +F APC
Sbjct: 250 SDPSHIDFAHHKV--TGRRDRAKPLPFKMEASGPWGFAG-----ANNDKPKITAKFVAPC 302
Query: 337 VLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGKSMLIV-------RFGTTGTSPW 383
N E +D K G++ + +++C P GK+ IV +F G + W
Sbjct: 303 YSMNKIE-IDTKLPIVGDQKWV--IWICSFNVPMAPGKTRSIVCSARNFSQFTVPGPA-W 358
Query: 384 IKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT--------KELYFNLRSIDTWV 435
++FP W H +++KV++ DM L Q +V L + +L F D +V
Sbjct: 359 WQVFPRWQEHWTSNKVYDGDMIVLQGQEKVFLSKSKENGTDVNKEYTKLTFTPTQADRFV 418
Query: 436 AEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPN 495
+R W+ + G+ P +FG ST + P +P+ V +
Sbjct: 419 LAFRNWLRRHGNSQPEWFG-STDNQP-LPSTV-----------------------LSKRQ 453
Query: 496 LANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWR----AFCLVSA 551
+ +R+ +H + C C+ A F + L + + A A + A R + ++SA
Sbjct: 454 MMDRFEQHTLKCSSCKKAYYTFEKLQKLLIGSVVVCCASAGIPADVNLRIILGSLAIISA 513
Query: 552 SL 553
L
Sbjct: 514 GL 515
>gi|407930081|gb|AFU51539.1| lethal leaf spot 1-like protein [Capsicum annuum]
Length = 537
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 225/495 (45%), Gaps = 86/495 (17%)
Query: 107 PASEEESRGERRVAD----------YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK 156
P E+ES + D + W + WYP+ L +D+ P + ++ +V++
Sbjct: 59 PIEEQESSTSTVIQDDEQDLSSYSKFSWRDNWYPVSLVEDLDPSLPTPFQLLNRDMVIWF 118
Query: 157 DGKG-ELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA--- 211
D G + D+CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ ++
Sbjct: 119 DKSGSQWVVLDDKCPHRLAPLSEGRLDENGHLQCSYHGWSFNGCGSCTRIPQAASEGPEA 178
Query: 212 ---KIPRSACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTI 263
+ PR+ R + SQG+++VW + P LP E+F +P F V+
Sbjct: 179 KAFQSPRATATR-FPTMVSQGLLFVWPDENGWERAQATKPPMLP--EDFDKPEFATVTIQ 235
Query: 264 HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKD 323
+L Y + L+EN+ DP+HI +H + + +R+ A+PL F++ GFAG +
Sbjct: 236 RDLFYGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLPFKMEASGPWGFAGANNDKPK 293
Query: 324 GSMPNFLRFEAPCVLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGKSMLIV---- 373
S +F APC N E +D K G++ + +++C P GK+ IV
Sbjct: 294 ISA----KFVAPCYSMNKIE-IDTKLPIVGDQKWV--IWICSFNVPMAPGKTRSIVCSAR 346
Query: 374 ---RFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT--------K 422
+F G + W ++FP W H +++KV++ DM L Q ++ L +
Sbjct: 347 NFFQFAVPGPA-WWQVFPRWQEHWTSNKVYDGDMIVLQGQEKIFLSKSKENGTDVNKDYT 405
Query: 423 ELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASL 482
+L F D +V +R W+ + G+ P +FG ST + P +P+ V
Sbjct: 406 KLTFTPTQADRFVLAFRNWLRRHGNSQPEWFG-STDNQP-LPSTV--------------- 448
Query: 483 PAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQ 542
+ + +R+ +H + C CR+A F + L + A A + +
Sbjct: 449 --------LSKRQMMDRFEQHTLKCSSCRNAYYTFERLQKFLIGTVLVCCATAGIPSDVN 500
Query: 543 WR----AFCLVSASL 553
R + ++SA L
Sbjct: 501 LRIILGSLAIISAGL 515
>gi|297799432|ref|XP_002867600.1| hypothetical protein ARALYDRAFT_492262 [Arabidopsis lyrata subsp.
lyrata]
gi|297313436|gb|EFH43859.1| hypothetical protein ARALYDRAFT_492262 [Arabidopsis lyrata subsp.
lyrata]
Length = 521
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 200/474 (42%), Gaps = 70/474 (14%)
Query: 114 RGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHR 172
R E +DW WYP+ D+ P G TV +V++ D + + + D CPHR
Sbjct: 66 RFESGSDKFDWYANWYPVMPICDLDKKVPHGKTVMGIDLVVWWDRNEKQWKVMDDTCPHR 125
Query: 173 LAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQ 228
LA LS+G++ GRL+C+YHGW F G G C IPQ P D + ACV Y
Sbjct: 126 LAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQH 185
Query: 229 GVVWVWMSQ----KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 284
++W W + K +K P+ P F + ++PY + +L+ENLMDPAH+P
Sbjct: 186 EIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVP 245
Query: 285 ISHDRTDYSAKREDAQPLGFEVTERTDRGFAG--QWGREKDGSMPNFLRFEAPCVLQNNR 342
+H Y RE +PL V + +GF +WG + F APCV +++
Sbjct: 246 YAH----YGLMREGGKPLEINVKKLDSKGFFSKQEWG---------YSNFIAPCVYRSST 292
Query: 343 ESV-------------DNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPD 389
+ + D K + +F+C P G+S LI F K+ P
Sbjct: 293 DPLPEQEHEYPAPAASDKAALSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPR 352
Query: 390 WYFHQSASKVFEQDMGFLSSQNEVLLKE--KVPTKELYFNLRSIDTWVAEYRKWMDKAGH 447
W FH + + + D+ L + +L+ K K + +S D V +R+W +K
Sbjct: 353 WVFHIGQNTILDSDLHLLHVEERKILERGPKNWQKACFIPTKS-DANVVTFRRWFNKYSE 411
Query: 448 GMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHC 507
+ G SL LP T L +RY+ HV +C
Sbjct: 412 AQVDWRGKFDPSL---------------------LPP-----TPPREQLFDRYWSHVENC 445
Query: 508 KGCRSAVKAFNTWKNSLSTAA-ALLTALAILG---AGRQWRAFCLVSASLCLAG 557
C+ A K N + L A+ A++ +A++ R LV+A L A
Sbjct: 446 SSCKKAHKYLNALEVILQIASVAMIGVMAVMKQTTMSNVARIAVLVAAVLSFAA 499
>gi|449452684|ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 538
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 196/503 (38%), Gaps = 100/503 (19%)
Query: 106 GPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRC 164
P E+ ER +DW +WYP+ D+ P G V +V++ D + +
Sbjct: 61 NPLEAVEAESER----FDWYAQWYPIMPICDLDKRVPHGKRVMGIDVVVWWDKNESGWKV 116
Query: 165 HQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVR 220
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV
Sbjct: 117 FDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVS 176
Query: 221 TYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDH 270
Y ++W W M++KTPP + P + + +LPY +
Sbjct: 177 VYPSVVQNDILWFWPNSDPQYKDIMAKKTPP------YIPEIDDPSYAKLIISRDLPYGY 230
Query: 271 SILLENLMDPAHIPISH-------DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKD 323
IL ENLMDPAH+P +H + A E QP+ V + GF G
Sbjct: 231 EILTENLMDPAHVPYAHYGLIRRQQTKNKKADEEGGQPIDIVVRDLDVHGFISNQGLGHG 290
Query: 324 GSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG---------------------LFLCR 362
+F APCV + + KH G +F+C
Sbjct: 291 -------KFVAPCVTYTSLNLPSKERNAKHQDNGTPSLDENNTVAPKTSQRKTMVVFMCI 343
Query: 363 PTGQGKSMLIVRFGTTGTSPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT 421
P GKS +I + W+ ++ P W FH + V + D L + +L +
Sbjct: 344 PISPGKSRVIF-IPLRNFAVWVNRIIPRWMFHLGQNLVMDSDSYLLHVEERKILDAGLAN 402
Query: 422 --KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVS 479
K + +S D V +R+W++K G + G + LP P
Sbjct: 403 WQKACFLPTKS-DAKVVAFRRWLNKYSDGHVDWRGKFSGILPPSPP-------------- 447
Query: 480 ASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGA 539
L RY+ HV++C C+ A K N + L + + +L I A
Sbjct: 448 -------------KEQLMERYWSHVVNCSSCKVAYKGLNALEVVLQVIS--IASLGIFAA 492
Query: 540 GRQ------WRAFCLVSASLCLA 556
+Q R LV A C A
Sbjct: 493 TKQSFVSGAARVLMLVMAIFCFA 515
>gi|307107837|gb|EFN56079.1| hypothetical protein CHLNCDRAFT_145588 [Chlorella variabilis]
Length = 563
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 174/377 (46%), Gaps = 57/377 (15%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQ 166
P S+EE + E+ A ++W ++WYP+ KD+PDDAP G + +Q IV++KDG G RC +
Sbjct: 73 PPSQEE-QPEQPEATFNWFDQWYPIAYVKDIPDDAPYGFVLLEQPIVIWKDGGGAYRCLR 131
Query: 167 DRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVK 225
D CPHRL LS+G++ +G L+C YHGWQF+G G C +PQ A Y+
Sbjct: 132 DACPHRLVPLSDGRIAPNGELQCPYHGWQFKGCGTCTLMPQ--GGDPTAPRAAATAYQCA 189
Query: 226 ESQGVVWVWM-------------SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSI 272
QG+VWV + S T P DK WF F D+ ++PYD +
Sbjct: 190 VKQGLVWVKLQPAPTDGSEPDTSSIHTIPELDKEGWF------AFGDM--WRDIPYDWAT 241
Query: 273 LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFL 330
L+EN++D H+P +H + V ER GF G W G K
Sbjct: 242 LIENVVDCGHVPFTH----------HGERAALGVLERGQFGFQGVWPTGPRKGALGAQHT 291
Query: 331 RFEAPCVLQNNRESVDNKT-GEKHYSTGLFLCRPTGQGKSMLIV----RFGTTGTSPWIK 385
RFE P ++++ ++ D + G G+ P G+ IV RF K
Sbjct: 292 RFEGPVLMRHTIDAFDTRGFGNITAVYGV----PVAPGRCRAIVRQPFRFKNKLLPLAFK 347
Query: 386 LFPDWYFHQSASKVFEQDMGFLSSQNEVLL----KEKV-------PTKELYFNLRSIDTW 434
+ P + H + V ++D FL Q +E V P ++Y+ + D +
Sbjct: 348 VMPAFLGHLGNNSVLDEDNIFLHMQARACFLPAEQESVRRGMGEKPAGQVYYMPAASDAY 407
Query: 435 VAEYRKWMDKAGHGMPY 451
V+ +R WM G P+
Sbjct: 408 VSAFRNWMKSVAGGGPF 424
>gi|357518875|ref|XP_003629726.1| Pheophorbide a oxygenase [Medicago truncatula]
gi|355523748|gb|AET04202.1| Pheophorbide a oxygenase [Medicago truncatula]
Length = 529
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 152/582 (26%), Positives = 232/582 (39%), Gaps = 99/582 (17%)
Query: 30 ALSSLHSLFFSPLLKIPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTD 89
++SSLH P+ P LK S FF + H +K T
Sbjct: 5 SVSSLHI----PIALEPQIPLKKSMFFNS----------QVHSTLPLIRGNASKFKLFTA 50
Query: 90 MSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFD 149
+S S + + V E E+ E+ +DW +WYPL D+ AP V
Sbjct: 51 LSPSPLTESSSSNLEVDDEPEVETGSEK----FDWYSQWYPLMPICDLDKRAPHAKKVMG 106
Query: 150 QQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQL 207
+V++ D + + D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ
Sbjct: 107 IDVVIWWDRNESAWQVFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQA 166
Query: 208 PADA---KIPRSACVRTYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFAR 254
P + + ACV Y ++W W +++KTP P+
Sbjct: 167 PPEGPPIHTSKKACVAAYPSTVQNDILWFWPNSDPQYKDIITRKTP------PFIPEIDD 220
Query: 255 PGFQDVSTIHELPYDHSILLENLMDPAHIPISH------DRTDYSAKREDAQPLGFEVTE 308
P F + ++ Y + +L+ENLMDP+H+P +H + A RE +PL + E
Sbjct: 221 PSFTSLMGNRDIAYGYEVLIENLMDPSHVPYAHYGLMKTPQPKVKADREGGRPLELSIEE 280
Query: 309 RTDRGFAGQWGREKDGSMPN--FLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQ 366
GF G K MP F + P ++ E+ + +K +F+C P
Sbjct: 281 LDVNGFTANQGWSKSKFMPPSIFYAYTDPNKPASSEETKKSSVQKKF--ALIFICIPVSP 338
Query: 367 GKSMLIVRFGTTGTSPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEK------- 418
G S LI F WI K+ P W FH + + + D+ L + + ++
Sbjct: 339 GNSRLIWCF-PRNFGLWIDKIVPRWIFHVGQNLILDSDLYLLHVEEKKIMDVGQANWHKA 397
Query: 419 --VPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVA 476
VPTK D V +RKW+ K G + G +LP P +
Sbjct: 398 CFVPTKA--------DALVIGFRKWLKKYAGGEVEWRGKYNGALPPTPPREQ-------- 441
Query: 477 GVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAI 536
L +RY+ H ++CK C A K+ N + L + + ++ I
Sbjct: 442 -------------------LLDRYWSHTVNCKSCNFAYKSLNVVEVMLQIIS--VASIGI 480
Query: 537 LGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRR 578
+ +Q S+ L V S A+S +FI + R
Sbjct: 481 VATMKQGVVSATTRNSMVLLAV--LSFALSRLLAHFIYKNFR 520
>gi|357114991|ref|XP_003559277.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 482
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 204/502 (40%), Gaps = 89/502 (17%)
Query: 106 GPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD---GKGEL 162
G A EE R +DW ++WYP+ D+ AP G T+ ++V + D G GE
Sbjct: 20 GGAEGEEGR-------FDWLDQWYPVAPVCDLDPRAPHGKTILGLRVVAWYDRTAGDGEW 72
Query: 163 RCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSAC 218
R D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA AC
Sbjct: 73 RVFDDACPHRLAPLSEGRIDDKGRLQCVYHGWCFDGRGSCQFIPQAPALGPPVHKNSKAC 132
Query: 219 VRTYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPY 268
V Y ++W + + +K P P+ P F V I +L Y
Sbjct: 133 VAAYPSVVQNNILWFYPRAGAEHEDVLQRKRP------PFIPEIDDPSFVTVYGIRDLSY 186
Query: 269 DHSILLENLMDPAHIPISH-----------DRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
+ +L+ENLMDPAH+P +H D RE P+ ++ E GF
Sbjct: 187 GYDVLVENLMDPAHVPYAHKGLMGRLRKKEDPGRVEFDREGGGPMKMKIEEAGVDGFLSP 246
Query: 318 WGREKDGSMPNFLRFEAPCVLQNN---RESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVR 374
+E G + R+ APC + R+ K +K +F+C P G+S +I
Sbjct: 247 --QENGG----YFRYVAPCTFYGSPLPRQEEGEK--KKPRIMLVFMCVPVAPGRSRVIWA 298
Query: 375 FGTTGTSPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT--KELYFNLRSI 431
F W+ K+ P WY+H + + + D+ L + V K +Y S
Sbjct: 299 F-PRNVGLWLDKIIPRWYYHIGQNAILDSDIYLLHVEERNFAAAGVENWQKAVYVPTSS- 356
Query: 432 DTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTM 491
D+ V +R W K H + V+ PA T
Sbjct: 357 DSMVIAFRNWFRK----------HCKSQVGWAAPTVDQLPA-----------------TP 389
Query: 492 HAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAA-----LLTALAILGAGRQWRAF 546
L RY+ HV C C +A+KA + +L AA L A L R
Sbjct: 390 TKDKLMERYWSHVEQCTSCSAALKAMKALEVALQVAAVAIVGFLTVAKETLVKSVAQRVA 449
Query: 547 CLVSASLCLAGVYACSTAISMN 568
+ +A LC A ++ I N
Sbjct: 450 VVSAAVLCFAASRWLASFIQKN 471
>gi|428304409|ref|YP_007141234.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428245944|gb|AFZ11724.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 468
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/429 (31%), Positives = 194/429 (45%), Gaps = 59/429 (13%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSE 178
A +D E WYP++ +D+ P T+ Q +V++ D +G R D+CPHRLA LSE
Sbjct: 23 ARFDCKEAWYPVFYIEDLDKSKPSKFTLLGQDLVIWWDKQGNSWRALADQCPHRLAPLSE 82
Query: 179 GQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWM 235
G++ DG LEC YHGW F GEGKC +IPQ A+ K S ACV ++ QG+++++
Sbjct: 83 GRIAEDGLLECPYHGWAFTGEGKCDRIPQQQAENKAHASQRACVASFPTVTRQGLLFIYP 142
Query: 236 SQKTPPNPDKLPWFENFARP--GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS 293
+ K+P E G+ ++T +LPYD LLEN++D +H+P +H R+
Sbjct: 143 GEPENAFNVKVPIIEPIEESPDGWICLNTFRDLPYDALTLLENVLDASHVPFTHHRS--V 200
Query: 294 AKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NKTG 350
R +A P+ EV +GF G W G K F F AP ++ ++ S +T
Sbjct: 201 GNRTNAAPVELEVVASDKQGFKGIWEEGPRKGTLGKQFTTFIAPALMWHDLTSKQFGRTL 260
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGF 406
Y+T P +G+ + RF +S ++KL P WY H + V E D F
Sbjct: 261 TVVYAT------PIRKGECRIFARFPFKFSSKLPGLFLKLTPRWYSHLGQNNVLEDDQIF 314
Query: 407 LSSQNEVLLKEKVP---TKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
L Q L + K Y R+ DT+V RKW+++ P F T S P
Sbjct: 315 LHYQERYLAAKGGGANFAKAFYLPTRA-DTFVTALRKWVNEY-QADP--FPEETFSPPLS 370
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFN--TWK 521
V L +RY H I C C A++ W
Sbjct: 371 TEV-----------------------------LLDRYHSHTIKCASCSQALRNIKRIRWG 401
Query: 522 NSLSTAAAL 530
+S A AL
Sbjct: 402 IGVSGAIAL 410
>gi|449527264|ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 538
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 196/503 (38%), Gaps = 100/503 (19%)
Query: 106 GPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRC 164
P E+ ER +DW +WYP+ D+ P G V +V++ D + +
Sbjct: 61 NPLEAVEAESER----FDWYAQWYPIMPICDLDKRVPHGKRVMGIDVVVWWDKNESGWKV 116
Query: 165 HQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVR 220
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV
Sbjct: 117 FDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVS 176
Query: 221 TYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDH 270
Y ++W W M++KTPP + P + + +LPY +
Sbjct: 177 VYPSVVQNDILWFWPNSDPQYKDIMAKKTPP------YIPEIDDPSYAKLIISRDLPYGY 230
Query: 271 SILLENLMDPAHIPISH-------DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKD 323
IL ENLMDPAH+P +H + A E QP+ V + GF G
Sbjct: 231 EILTENLMDPAHVPYAHYGLIRRQQTKNKKADEEGGQPIDIVVRDLDVHGFISNQGLGHG 290
Query: 324 GSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG---------------------LFLCR 362
+F APCV + + KH G +F+C
Sbjct: 291 -------KFVAPCVTYTSLNLPSKERNAKHQDNGTPSLDENNTVAPKTSQRKTMVVFMCI 343
Query: 363 PTGQGKSMLIVRFGTTGTSPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT 421
P GKS +I + W+ ++ P W FH + V + D L + +L +
Sbjct: 344 PISPGKSRVIF-IPLRNFAVWVNRIIPRWMFHLGQNLVMDSDSYLLHVEERKILDAGLAN 402
Query: 422 --KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVS 479
K + +S D V +R+W++K G + G + LP P
Sbjct: 403 WQKACFLPTKS-DAKVVAFRRWLNKYSDGHVDWRGKFSGILPPSPP-------------- 447
Query: 480 ASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGA 539
L RY+ HV++C C+ A K N + L + + +L I A
Sbjct: 448 -------------KEQLMERYWSHVVNCSSCKVAYKGLNALEVVLQVIS--IASLGIFAA 492
Query: 540 GRQ------WRAFCLVSASLCLA 556
+Q R + A LC A
Sbjct: 493 TKQSLVSGAARVLMVAMAILCFA 515
>gi|242037721|ref|XP_002466255.1| hypothetical protein SORBIDRAFT_01g004440 [Sorghum bicolor]
gi|241920109|gb|EER93253.1| hypothetical protein SORBIDRAFT_01g004440 [Sorghum bicolor]
Length = 525
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 199/469 (42%), Gaps = 58/469 (12%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQ 180
+DW ++WYP D+ AP G TV +V + D G GE R D CPHRLA LSEG+
Sbjct: 82 FDWLDQWYPFAPVCDLDPRAPHGKTVLGLSVVAWYDRGAGEWRVFDDACPHRLAPLSEGR 141
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRTYEVKESQGVVWVWMS 236
+ D GRL+C+YHGW F+G G C IPQ PA ACV +Y ++W +
Sbjct: 142 IDDKGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSPKACVASYPCVVQNNILWFY-P 200
Query: 237 QKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD--- 288
+ P D L P+ P F V I +LPY + IL+ENL+DPAH+P +H
Sbjct: 201 RADPEYKDVLQRKRPPFIPEIDDPEFVTVYGIRDLPYGYDILIENLLDPAHVPYAHKGII 260
Query: 289 RTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV--LQNNRESVD 346
R RE P ++ + +GF R + +F APC + +
Sbjct: 261 RGILEYDREGGGPSKMKIEQANIQGFVSPQER-------GYFQFVAPCTSFAAPFPQPQE 313
Query: 347 NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWI-KLFPDWYFHQSASKVFEQDMG 405
+K + +FLC P G+S +I F W+ + P W +H + V + D+
Sbjct: 314 DKKKKVPRVMLVFLCIPVSPGRSRVIWAF-PRNIGVWLHHITPRWLYHVGQNLVLDSDIF 372
Query: 406 FLSSQNEVLLKEKVPT-KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVP 464
L + + ++ + S D+ V +R W K G +T + ++P
Sbjct: 373 LLHVEERKFATVGLDNWQKACYVPTSSDSMVVAFRNWFKKFSKNQ---IGWATPQIDQLP 429
Query: 465 AVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL 524
P K L RY+ HV C C +A+KA + L
Sbjct: 430 PT----------------PTKD--------QLMERYWSHVAQCTSCNAALKAMKALEVVL 465
Query: 525 STAA-ALLTALAI----LGAGRQWRAFCLVSASLCLAGVYACSTAISMN 568
A+ A++ LA+ L RA + +A LC A + I N
Sbjct: 466 QVASVAVVGFLAVAKETLVTSTVQRAAVVSAAVLCFAASRWLANFIQKN 514
>gi|113477251|ref|YP_723312.1| pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
gi|110168299|gb|ABG52839.1| Pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
Length = 443
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 206/457 (45%), Gaps = 52/457 (11%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSE 178
++++ + WYPL +D+ + P+ +T+ +V++K + + D CPHRLA LSE
Sbjct: 3 TEFNFFQHWYPLSPVEDLDPEIPVSITLLGMGLVIWKPRYSQNYQVFLDVCPHRLAPLSE 62
Query: 179 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 233
G++ + G L C YHGWQF EG C IPQ I ++ CV + V++ ++WV
Sbjct: 63 GRVDEKTGNLMCSYHGWQFNSEGICTDIPQAENQEIIEKNRQNFCVTSLPVRQENDLLWV 122
Query: 234 WMSQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
W +KT LP A GF S + +L YD L+EN+ DP+H+P SH
Sbjct: 123 WPDRKTADLAASTPLPLSPQIDAEKGFVWSSYVRDLEYDWETLVENVADPSHVPFSHHGV 182
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
R A+P+ E+ + T R +P + FE PC L+ E K G
Sbjct: 183 --QGNRNKARPIVMEILQSTINVIKVSISR----GLPTIITFEPPCRLE--YEISIGKDG 234
Query: 351 EKHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMGFLS 408
+K GL C P GKS ++ +F +L P W+ H Q+ + V + DM L+
Sbjct: 235 KK---IGLVTYCLPVSPGKSRIVAQFPRNFAKIIHRLTPRWWDHIQNRNLVLDGDMVLLN 291
Query: 409 SQNEVLLKEKVPTKE---LYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPA 465
Q E LL++K +K Y S D V E+R W DK HG LP
Sbjct: 292 QQ-EYLLQQKQSSKSWKTAYQLPTSADRLVIEFRNWFDKYSHG----------QLPWSEV 340
Query: 466 VVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLS 525
V + LV S L NRY +H HC CR A+K + L
Sbjct: 341 GVSDSNNSLVNNNHGS--------------LLNRYQQHTQHCSSCRQALKNLKRLQIFLI 386
Query: 526 TAAAL-LTALAILGAGRQWR-AFCLVSASLCLAGVYA 560
T + ++ +AIL + + L+ ++ G+YA
Sbjct: 387 TYFVVTVSGVAILPDNLRIKIGLPLIITAVLGMGIYA 423
>gi|326494078|dbj|BAJ85501.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495628|dbj|BAJ85910.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522616|dbj|BAK07770.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 205/507 (40%), Gaps = 87/507 (17%)
Query: 106 GPASEEESRGERRVAD---YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGE 161
P++ GE + + +DW ++WYPL D+ AP G TV ++V + D E
Sbjct: 57 APSAPSPFGGEEKAEEAGSFDWLDQWYPLAPVCDLDPGAPHGKTVLGLRVVAWYDRAVDE 116
Query: 162 LRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSA 217
R D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA A
Sbjct: 117 WRVFDDACPHRLAPLSEGRIDDKGRLQCVYHGWCFDGRGSCQFIPQAPALGPPVHKNSKA 176
Query: 218 CVRTYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELP 267
CV +Y ++W + + +K PP + P F V + +LP
Sbjct: 177 CVASYPSVVQNNILWFYPKADAQHQDVLQRKRPP------FIPEIDDPSFVTVYGVRDLP 230
Query: 268 YDHSILLENLMDPAHIPISHD-------------RTDYSAKREDAQPLGFEVTERTDRGF 314
Y + +L+ENLMDPAH+P +H R ++ E P+ ++ E GF
Sbjct: 231 YGYDVLVENLMDPAHVPYAHKGLMGKLRKKEDPGRVEFDV--EGGGPVKMKIAEADIAGF 288
Query: 315 AGQWGREKDGSMPNFLRFEAPCV-----LQNNRESVDNKTGEKHYSTGLFLCRPTGQGKS 369
E+D S + R+ APC L E + K + +F+C P GKS
Sbjct: 289 LS----EQDNS--GYFRYVAPCTFYGSPLPKEEEGEEKKKKKPPQFMLVFMCVPVSPGKS 342
Query: 370 MLIVRFGTTGTSPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT--KELYF 426
+I F W+ K+ P WY+H + + + D+ L + V K +Y
Sbjct: 343 RVIWAF-PRNIGVWLDKVIPRWYYHIGQNAILDSDIYLLHIEERNFAAAGVENWQKAVYV 401
Query: 427 NLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKG 486
S D V +R W K + + LP+ P
Sbjct: 402 PTSS-DNMVIAFRNWFRKHCKSQVGWAAPTIGQLPETPT--------------------- 439
Query: 487 GIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR----- 541
L RY+ HV C+ C +A+K + +L A+ + + G
Sbjct: 440 ------KDKLMERYWSHVAQCRSCSTALKTMKALEVALQVASVAVVGFLAVAKGTLVTSV 493
Query: 542 QWRAFCLVSASLCLAGVYACSTAISMN 568
RA + A LC A ++ I N
Sbjct: 494 VQRAAVVTLAVLCFAASRWLASFIEKN 520
>gi|126656429|ref|ZP_01727690.1| hypothetical protein CY0110_22037 [Cyanothece sp. CCY0110]
gi|126622115|gb|EAZ92822.1| hypothetical protein CY0110_22037 [Cyanothece sp. CCY0110]
Length = 466
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 196/432 (45%), Gaps = 57/432 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRC-HQDRCPHRLAKLSEGQ 180
+DW E WYP++ +D+ P T+ ++ IV++ D K C D+CPHRLA LSEG+
Sbjct: 24 FDWKEVWYPVHYIEDLDKTKPTSFTLLEKNIVIWWDKKNSQWCVFDDQCPHRLAPLSEGR 83
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 237
+ + G LEC YHGW F G+G C IPQ + +S A V TY K +QG+++V+ +
Sbjct: 84 INESGCLECPYHGWAFSGQGNCEVIPQQKPEGNAEQSPRASVNTYSTKVAQGLLFVYAGK 143
Query: 238 KTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
+P + + V +T ++PYD L+EN++D +HIP +H ++
Sbjct: 144 TENAAKTPIPLVDVLEESSREWVCLNTFRDIPYDALTLMENVLDSSHIPYTHHKS--VGN 201
Query: 296 REDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NKTGEK 352
R + P+ EV E GF G W G K F AP ++ ++ S +T
Sbjct: 202 RSNVSPVDLEVVESGKWGFKGVWEEGPRKGTLGKQTTHFFAPGMMYHDLTSKQFGRTLTV 261
Query: 353 HYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGFLS 408
Y+T P +GK L RF SP +I L P WY H + V E D FL
Sbjct: 262 VYAT------PISKGKCRLFARFPFKFCSPIPKFFINLTPRWYSHIGQNGVLEDDQIFLH 315
Query: 409 SQNEVLLKE---KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPA 465
Q L K+ +K Y ++ D +V + W+++ + P+ P
Sbjct: 316 YQERYLEKKGGSSNVSKAFYLPTKA-DLFVFQLHSWINQ----------YQAQLFPEQPL 364
Query: 466 VVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLS 525
+PA + + L +RY H C CR+A+K K +S
Sbjct: 365 ----SPA------------------LSSETLLDRYHSHTKDCSSCRTALKNIQRIKIGVS 402
Query: 526 TAAALLTALAIL 537
A +L+ +L ++
Sbjct: 403 VATSLIWSLIVI 414
>gi|443474699|ref|ZP_21064670.1| Pheophorbide a oxygenase [Pseudanabaena biceps PCC 7429]
gi|443020589|gb|ELS34534.1| Pheophorbide a oxygenase [Pseudanabaena biceps PCC 7429]
Length = 480
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 208/475 (43%), Gaps = 72/475 (15%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRL 173
G R +DW E WYP++ +D+ P T+ ++ +V++ D + DRCPHRL
Sbjct: 32 GGRDPDRFDWQEVWYPVFYLEDLDKTKPAKFTLLERDLVIWWDRHSNAWQAFDDRCPHRL 91
Query: 174 AKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGV 230
LSEG++ DG LEC YHGW F+G+G C +IPQ P A + ACV + E QG+
Sbjct: 92 VPLSEGRIAEDGLLECPYHGWAFKGDGSCDRIPQQPEGGTAHTSKRACVSSLPTAERQGL 151
Query: 231 VWVWMSQKTPPNPDKLPWFENFARP--GFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
++++ + K+P E + T +LPYD LLEN++D +H+P +H
Sbjct: 152 LFIYAGKPENAPQVKIPIIEPLETETDKWTLFGTFRDLPYDAITLLENVLDASHLPFTHH 211
Query: 289 RTDYSAKREDAQPLGFEVTERTDRGFAGQWG----REKDGSMPNFLRFEAPCVLQNNRES 344
++ R +A P+ EV E GF G W R K G F AP ++ ++ S
Sbjct: 212 KS--VGNRANAAPMFLEVLETEKYGFKGTWEEGPRRGKLGRQDT--TFIAPSLMWHDLTS 267
Query: 345 VD-NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKV 399
+T Y+T PT +G+ L RF +S +I + P WY H + +
Sbjct: 268 KQFGRTITAVYAT------PTRKGECRLFARFPFQFSSAIPRFFIGITPRWYSHIGQNGI 321
Query: 400 FEQDMGFLSSQNEVL------LKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYF 453
E D FL Q L ++++ + ++ S DT+V E RKW+ + P F
Sbjct: 322 LEDDQIFLHYQERYLEQTLAKMEDRANYAKAFYLSTSADTYVTELRKWVSRY-QADP--F 378
Query: 454 GHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSA 513
++ P V V L +RY H C C A
Sbjct: 379 AGQQLAAPLVKEV-----------------------------LLDRYHSHTSKCASCSQA 409
Query: 514 VKAFNTWKN-SLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISM 567
++ K S++ AA T + +L A++ + G+ + AI++
Sbjct: 410 LRNVRRLKTASMTIAAIAWTVIPLLS--------FFAPANITVIGIGSIVVAIAI 456
>gi|359464344|ref|ZP_09252907.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 481
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 192/438 (43%), Gaps = 61/438 (13%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSE 178
+ + W + W+P+ KD+ T+ +Q +V++ D E R D+CPHRLA LSE
Sbjct: 37 SQFTWQDAWHPIAYVKDLDPYQLSTFTLLEQDLVIWWDQSAETWRVFADQCPHRLAPLSE 96
Query: 179 GQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKI--PRSACVRTYEVKESQGVVWVWM 235
G+L DG LEC YHGW F G G+C +IPQ + R ACV++ QG+++V+
Sbjct: 97 GRLTADGLLECPYHGWAFSGLGQCCRIPQQVGGQSVEQSRRACVQSLPTTVRQGMLFVYP 156
Query: 236 SQKTP----PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
Q P P P E A + + + +LP+D LLEN++DP+H+P +H R+
Sbjct: 157 GQSERAAHIPIPLVAPLEE--APNKWIVLDGVRDLPFDVLTLLENVLDPSHLPFAHHRS- 213
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQW----GREKDGSMPNFLRFEAPCVLQNNRESVDN 347
R A P+ E+ +GF G W G +K F AP ++ + D
Sbjct: 214 -VGDRSVAGPMDLEINHSDRQGFQGIWKTAVGPKKGQFGTQLTTFIAPNLIWH-----DL 267
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPW----IKLFPDWYFHQSASKVFEQD 403
T EK+ + + C P +G+ L RF SPW I+ P W FH + + E D
Sbjct: 268 TTQEKNRTLTVAYCTPIRKGECRLFARFPFQFASPWPAGLIRYTPSWVFHLLQNSILEDD 327
Query: 404 MGFLSSQNEVLLKEK--VPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLP 461
FL Q L +++ +P + ++ D +V +W+ + Y + P
Sbjct: 328 QIFLYLQERHLAQQRQGMPIAQAFYMPTQADRFVVALHQWLQR-------YNADPFPNRP 380
Query: 462 KVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWK 521
PA+ + RY H +HC CR+A+ +
Sbjct: 381 LPPAIGRE-------------------------QVIERYHSHTVHCASCRTALSRIKRGR 415
Query: 522 NSLSTAA--ALLTALAIL 537
+ A A +TA A L
Sbjct: 416 QGMVMGALVAWITAQAYL 433
>gi|172036878|ref|YP_001803379.1| cell death suppressor protein [Cyanothece sp. ATCC 51142]
gi|354554681|ref|ZP_08973985.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
gi|171698332|gb|ACB51313.1| putative Rieske [2Fe-2S] domain-containing cell death suppressor
protein [Cyanothece sp. ATCC 51142]
gi|353553490|gb|EHC22882.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
Length = 465
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 196/427 (45%), Gaps = 59/427 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRC-HQDRCPHRLAKLSEGQ 180
+DW E WYP++ +D+ P T+ ++ IV++ D C D+CPHRLA LS+G+
Sbjct: 24 FDWQEVWYPVHYIEDLDKTKPTSFTLLEKNIVIWWDENNSQWCVFDDQCPHRLAPLSQGR 83
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWM-- 235
+ + G LEC YHGW F G+G C IPQ + K +S A V+TY K +QG+++V+
Sbjct: 84 INESGCLECPYHGWAFSGQGNCEVIPQQKPEGKAEQSPRASVKTYPTKVAQGLLFVYAGK 143
Query: 236 SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
++ P P L + + ++T ++PYD L+EN++D +HIP +H ++
Sbjct: 144 TENAPKTPIPLVDVLDEKSDEWVCINTFRDIPYDALTLMENVLDSSHIPYTHHKS--VGN 201
Query: 296 REDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NKTGEK 352
R + P+ EV E GF G W G K F AP ++ ++ S +T
Sbjct: 202 RSNVSPVDLEVVESGKWGFKGVWEEGPRKGTLGKQTTYFFAPGMMYHDLTSKQFGRTLTV 261
Query: 353 HYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGFLS 408
Y+T P G+GK L RF +SP +I L P WY H + V E D FL
Sbjct: 262 VYAT------PIGKGKCRLFARFPFKFSSPIPKFFINLTPRWYSHIGQNGVLEDDQIFLH 315
Query: 409 SQNEVLLKEK----VPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVP 464
Q E L+EK +K Y ++ D +V + W+++ +
Sbjct: 316 YQ-ERYLEEKGGSPNVSKAFYLPTKA-DLFVFQLHSWINQYQAEL--------------- 358
Query: 465 AVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL 524
P + + + L +RY H HC CR+A+K K +
Sbjct: 359 -----------------FPKQSLSPALSSETLLDRYHSHTKHCSSCRTALKNLQRIKIGV 401
Query: 525 STAAALL 531
+ A +++
Sbjct: 402 AIATSVI 408
>gi|443323888|ref|ZP_21052865.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442796320|gb|ELS05613.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 469
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 211/481 (43%), Gaps = 74/481 (15%)
Query: 108 ASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQ 166
AS G +D E WYP+ D+ P T+ + +VL+ D K + R
Sbjct: 6 ASNTIPAGGTEATSFDVKEAWYPVAYLDDLDKTKPTTFTLLEIDLVLWWDAKSQSWRAFV 65
Query: 167 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA--DAKIPRSACVRTYE 223
D+CPHRLA LSEG++ + G LEC YHGW F G G C IPQ A A + AC Y
Sbjct: 66 DQCPHRLASLSEGRINEQGLLECPYHGWSFSGSGNCEDIPQQSATNQANTSKRACATAYP 125
Query: 224 VKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSILLENLMDPA 281
+ +QG+++V+ + N +P E + V +LPYD LLEN++D +
Sbjct: 126 TQTAQGLLFVYPGKAAMANQVPVPIVEPIEESPEEWVCLDLFRDLPYDALTLLENVLDVS 185
Query: 282 HIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQ 339
H+P +H +T +KR +A P+ VT+ GF G W G K + F AP ++
Sbjct: 186 HVPYTHHKT--VSKRSNAAPVDLAVTQSDKNGFQGVWEEGPRKGELGTQYTSFIAPSLMW 243
Query: 340 NNRESVD-NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQ 394
++ S +T Y+T P +G+ L RF SP +IKL P WY H
Sbjct: 244 HDLTSKQFGRTLTVVYAT------PIRKGQCRLFARFPFKFASPIPAFFIKLTPRWYSHV 297
Query: 395 SASKVFEQDMGFLSSQNEVLLKEKVP---TKELYFNLRSIDTWVAEYRKWMDKAGHGMPY 451
+ V E D FL Q L + +K Y ++ D +V+E R+W++ H P+
Sbjct: 298 NQHTVLEDDQIFLHHQERYLEAKGGSDNYSKAFYLATKA-DLYVSELRQWVN-LYHADPF 355
Query: 452 YFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCR 511
LP PA+++ L RY H +C CR
Sbjct: 356 ----PNEKLP--PALLKE-------------------------QLLERYHSHTKNCASCR 384
Query: 512 SAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTN 571
A+K L A+ L+ A+++ S S L+ V+A ++AI+ + +
Sbjct: 385 QALKNI----QKLKLASGLVGAISL-------------SLSPILSVVFASASAITQRSAS 427
Query: 572 F 572
Sbjct: 428 L 428
>gi|224118438|ref|XP_002331482.1| predicted protein [Populus trichocarpa]
gi|222873560|gb|EEF10691.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 215/469 (45%), Gaps = 70/469 (14%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDR 168
++ES E + + W + WYP+ L +D+ P + + +VL+ D E D+
Sbjct: 70 DDESGEEVIDSKFTWRDHWYPVSLLEDLDPLLPTPFQLLGRDLVLWFDKANQEWVAFDDK 129
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ-LPAD-----AKIPRSACVRT 221
CPHRLA LSEG++ + G L+C YHGW F+G G C +IPQ LP K PR AC
Sbjct: 130 CPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQALPEGPEARAVKSPR-ACATR 188
Query: 222 YEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 276
+ SQG+++VW + P LP ++F +P F V+ +L Y + L+EN
Sbjct: 189 FPTMVSQGLLFVWPDENGWERAQATKPPMLP--DDFNKPEFSTVTIQRDLFYGYDTLMEN 246
Query: 277 LMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPC 336
+ DP+HI +H + + +R+ A+PL F++ GFAG DG+ F APC
Sbjct: 247 VSDPSHIDFAHHKV--TGRRDRAKPLEFKLESSGPWGFAG----ANDGNPRITAEFVAPC 300
Query: 337 VLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGKSMLIV-----RFGTTGTSP-WI 384
N E +D K G++ + +++C P GK+ IV F T P W
Sbjct: 301 YYVNKVE-IDTKLPIVGDQKWI--IWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWW 357
Query: 385 KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKV--------PTKELYFNLRSIDTWVA 436
++FP W+ H +++KV++ DM L Q + L + + +L F D +V
Sbjct: 358 QVFPRWHEHWTSNKVYDGDMIVLQGQEKTFLSQSMGGSADINKQYTKLTFTPTQADRFVL 417
Query: 437 EYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNL 496
E+R W+ + G+ P +FG + L P+ V + +
Sbjct: 418 EFRGWLRRHGNSKPEWFGLTDKQL--FPSAV-----------------------LSKREM 452
Query: 497 ANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRA 545
+R+ +H C C+ A +F T + L A A + + Q R
Sbjct: 453 LDRFEQHTKKCSSCKKAYTSFQTLQKFLIGATIAFCATVGIPSDVQLRV 501
>gi|18416592|ref|NP_567725.1| ACD1-like protein [Arabidopsis thaliana]
gi|15983402|gb|AAL11569.1|AF424575_1 AT4g25650/L73G19_30 [Arabidopsis thaliana]
gi|15810259|gb|AAL07017.1| unknown protein [Arabidopsis thaliana]
gi|37962888|gb|AAR05798.1| LLS1-like protein [Arabidopsis thaliana]
gi|332659688|gb|AEE85088.1| ACD1-like protein [Arabidopsis thaliana]
Length = 536
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 202/486 (41%), Gaps = 76/486 (15%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDR 168
E E+ E +DW WYP+ D+ P G V +V++ D + + + D
Sbjct: 67 EPEALFEPGSDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDT 126
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEV 224
CPHRLA LS+G++ GRL+C+YHGW F G G C IPQ P D + ACV Y
Sbjct: 127 CPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPS 186
Query: 225 KESQGVVWVWMSQ----KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 280
++W W + K +K P+ P F + ++PY + +L+ENLMDP
Sbjct: 187 TVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDP 246
Query: 281 AHIPISH------DRTDYSAKREDAQPLGFEVTERTDRGFAG--QWGREKDGSMPNFLRF 332
AH+P +H + RE +PL V + ++GF +WG + F
Sbjct: 247 AHVPYAHYGLMRFPKPKEKIDREGGKPLEINVKKLDNKGFFSKQEWG---------YSNF 297
Query: 333 EAPCVLQNNRESV-------------DNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTG 379
APCV +++ + + D K + +F+C P G+S LI F
Sbjct: 298 IAPCVYRSSTDPLPEQEHEYPAPAASDKAALSKRRLSLIFICIPVSPGRSRLIWTFPRNF 357
Query: 380 TSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVP---TKELYFNLRSIDTWVA 436
K+ P W FH + + + D+ L + +L E+ P K + +S D V
Sbjct: 358 GVFIDKIVPRWVFHIGQNTILDSDLHLLHVEERKIL-ERGPENWQKACFIPTKS-DANVV 415
Query: 437 EYRKWMDKAGHGMPYYFGH-STISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPN 495
+R+W +K + G LP P +
Sbjct: 416 TFRRWFNKYSEARVDWRGKFDPFLLPPTPPREQ--------------------------- 448
Query: 496 LANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAA-ALLTALAILG---AGRQWRAFCLVSA 551
L +RY+ HV +C C+ A K N + L A+ A++ +A+L R LV+A
Sbjct: 449 LFDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAVLKQTTMSNVARIAVLVAA 508
Query: 552 SLCLAG 557
L A
Sbjct: 509 VLSFAA 514
>gi|224056994|ref|XP_002299108.1| predicted protein [Populus trichocarpa]
gi|222846366|gb|EEE83913.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 204/502 (40%), Gaps = 86/502 (17%)
Query: 91 SSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQ 150
S S V TP+ P E +S+ E+ +DW WYP+ D+ AP V
Sbjct: 4 SPSFVSTPE-------PELEADSQAEK----FDWYAHWYPVMPVCDLDKRAPHAKKVMGL 52
Query: 151 QIVLYKD-GKGELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP 208
IV++ D + R + CPHR+A LSEG++ GRL+C+YHGW F G G C IPQ P
Sbjct: 53 DIVVWWDKNESSWRVFNNACPHRMAPLSEGRVDQWGRLQCVYHGWCFNGSGNCNFIPQAP 112
Query: 209 ADA---KIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDV 260
D + ACV Y +VW W P D + P+ P + +
Sbjct: 113 TDGPPVSTSKKACVAVYPSTVHHDIVWFW-PNTDPQYKDIILKKQPPFIPELDDPSYIKI 171
Query: 261 STIHELPYDHSILLENLMDPAHIPISHD---RTD-------YSAKREDAQPLGFEVTERT 310
+ +LPY + +L+ENLMDPAH+P +H RT A RE P+ + +
Sbjct: 172 TGSRDLPYGYEVLIENLMDPAHVPYAHYGIMRTRQPKGILRLKADREGGSPVELSIKKLD 231
Query: 311 DRGFAG---QWGREKDGSMPNFLRFEAPCVLQNNRESV-----------DNKTGEKHYST 356
GF G Q+G K F APC+ + V + K +
Sbjct: 232 IDGFIGNQVQFGINK---------FIAPCISYADSSPVVDQGDDAIADTEKKPSMQRREA 282
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLK 416
+F C P G S LI WI P + H + V + D+ L + +++
Sbjct: 283 LIFFCVPVSPGNSRLIWAI-PKNYGVWIAKVPRFIHHSVTNIVLDSDLYLLHLEERKIME 341
Query: 417 EKVPT-KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLV 475
++ F D +V +RKW++K G + G+ + +LP P +
Sbjct: 342 IGASNWQKACFVPAKSDAFVVGFRKWLNKYAGGQVDWRGNYSGTLPPTPPREQ------- 394
Query: 476 AGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALA 535
L +RY+ HV++C C SA K N + L A+ L +
Sbjct: 395 --------------------LLDRYWSHVVNCPSCNSAYKGLNAVEVILQFAS--LAFIG 432
Query: 536 ILGAGRQWRAFCLVSASLCLAG 557
I GA + + A +C G
Sbjct: 433 IAGATKHNVYTMVAMAVVCFVG 454
>gi|359462641|ref|ZP_09251204.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 458
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 205/460 (44%), Gaps = 59/460 (12%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLSEGQ 180
+++ ++WYP+ +D+ P +T+ Q V+++ + QD CPHRLA LSEG+
Sbjct: 16 FNFWQQWYPVAPLEDLDPQRPTPITLLGQHFVIWQPKDSDQYLVFQDLCPHRLAPLSEGR 75
Query: 181 LID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVWM 235
+ + G+L C YHGWQF+ +G C IPQ A+A P+ + CV + + G++WVW
Sbjct: 76 IDEQTGQLMCSYHGWQFDQQGLCTHIPQ--AEAITPQQSQLYCVTSVPTQSQSGLLWVW- 132
Query: 236 SQKTPPNPDK--------LPW--FENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 285
P+PD LP F N A F S + +L YD L+EN+ DP+H+P
Sbjct: 133 -----PDPDTQDIAATQPLPLSPFVN-ADQNFVWSSVMRDLAYDWQTLVENVSDPSHVPF 186
Query: 286 SHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESV 345
+H R A P+ EV T Q G + F+ PC R
Sbjct: 187 AHHGV--QGNRNQAAPIPMEVLTSTPELIEVQ----TTGKFSTNITFQPPC-----RVEY 235
Query: 346 DNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDM 404
G+ +T + C P G+S ++ F + +K+ P W H ++ + V + DM
Sbjct: 236 QFSIGDGKQATMVTYCIPIAPGRSRIVALFARNFATGLMKVIPRWVEHMKNRNPVLDGDM 295
Query: 405 GFLSSQNEVLLK--EKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPK 462
L SQ + LL+ + + +Y S D V EYR+W +K HG +
Sbjct: 296 ILLRSQEKQLLQHTQTQSWQTIYKLPTSADRLVIEYRRWFEKYSHG-------------Q 342
Query: 463 VPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKN 522
+P H + + L +G P L +RY +H + C CR A+ +
Sbjct: 343 IPWGSAHQQIPVASNNYDYLQPQGE----QRPQLLDRYHQHTLICSSCRGALSRIKLLQK 398
Query: 523 SLSTAAAL-LTALAILGAGRQ--WRAFCLVSASLCLAGVY 559
L A+ ++ AIL + W +++A L L G Y
Sbjct: 399 MLVAVFAIAISGAAILPDDLRATWGIPLVITALLGLGGCY 438
>gi|224073160|ref|XP_002304001.1| predicted protein [Populus trichocarpa]
gi|222841433|gb|EEE78980.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 196/497 (39%), Gaps = 88/497 (17%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDR 168
E E + +DW +WYP+ D+ P TV +V++ D + E + D
Sbjct: 18 EAELEAASQEEKFDWYAQWYPVMPVCDLDKRVPHAKTVMGLDLVVWWDRNESEWKVFDDS 77
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEV 224
CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P ACV Y
Sbjct: 78 CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGNCKFIPQAPPAGPPVHTSMKACVAVYPS 137
Query: 225 KESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILL 274
+VW W PN D + P+ P F + PY + +L+
Sbjct: 138 TVHHDIVWFW------PNTDPQYRDIITKKQPPFIPELDDPSFTKHMGNRDFPYGYDVLI 191
Query: 275 ENLMDPAHIPISHDRTDYSAK----------REDAQPLGFEVTERTDRGFAGQWGREKDG 324
ENL+DPAH+P +H + K RE P+ V + +GF D
Sbjct: 192 ENLLDPAHLPYAHYGLVNAPKPQGILMHYSDREGGGPIDLSVKKLDSQGFFENQDHFGD- 250
Query: 325 SMPNFLRFEAPCVLQNNRESVD--NKTGEKHYSTG-LFLCRPTGQGKSMLIVRFGTTGTS 381
+F APC+ + D K G +F+C P G+S LI F
Sbjct: 251 -----TKFIAPCISYASSSPGDAPEKQGSMQKRMAFVFICIPVSPGRSRLIWIF-PRNFG 304
Query: 382 PWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEK---------VPTKELYFNLRSI 431
WI K+ P W FH + VF+ D+ L Q + VPTK
Sbjct: 305 LWIDKVVPRWIFHLKYNLVFDSDLYLLHMQERKFMDVGPANWQKACFVPTKS-------- 356
Query: 432 DTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTM 491
D + YR+W +K G + G +LP T
Sbjct: 357 DALLVGYRRWFNKYSGGQVDWKGKYCGALPP---------------------------TS 389
Query: 492 HAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSA 551
L +RY+ HV++C+ C +A K N + L A+ L + + A +Q +V A
Sbjct: 390 PREQLFDRYWSHVVNCRSCNAAYKGLNALEVILQVAS--LAFIGVAAATKQNANTMVVMA 447
Query: 552 SLCLAGVYACSTAISMN 568
+C AG + IS N
Sbjct: 448 VVCFAGSRWLARFISKN 464
>gi|414079743|ref|YP_007001167.1| pheophorbide a oxygenase [Anabaena sp. 90]
gi|413973022|gb|AFW97110.1| pheophorbide a oxygenase [Anabaena sp. 90]
Length = 469
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 200/452 (44%), Gaps = 61/452 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQ 180
+ E WYP++ +D+ P T+ + IV++ D K + D+CPHRLA LSEG+
Sbjct: 26 FQLAEAWYPVHYLQDLDKSKPTPFTLLGKDIVIWWDQKNSSWQVFIDQCPHRLAPLSEGR 85
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 237
+ DG LEC YHGW F G+G C KIPQ A K S ACV + E QG+++V+
Sbjct: 86 INEDGLLECPYHGWSFAGDGSCQKIPQQVAGGKAETSPRACVPSLPTTERQGLLFVYAGN 145
Query: 238 KTPPNPDKLPWFENF--ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
K+P E A G+ ++T ++PYD LLEN++DP+HI +H T
Sbjct: 146 PENAINTKVPVVEPIESAPEGWVIMNTFRDVPYDALTLLENILDPSHIAFTHHLT--VGN 203
Query: 296 REDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKH 353
R +A PL E+ E GF G W G + S F AP ++ ++ + EK
Sbjct: 204 RANAAPLELEIVESGKYGFEGIWKQGLKPGQSGKLSTTFIAPGLMWHDINA------EKG 257
Query: 354 YSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGFLSS 409
+ P +G+ +I RF S +IK+ P WY H + V E D FL
Sbjct: 258 RILTVVYAVPIRKGECRIIARFPFKFKSQIPGFFIKIRPRWYVHIGQNGVLEDDQIFLHY 317
Query: 410 QNEVLLKEKVP---TKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAV 466
Q L + K Y ++ DT+VAE RKW+++ HG + SLP +
Sbjct: 318 QERYLADKGGSANFNKAFYLATKA-DTFVAELRKWVNQY-HGETF----PGESLPPL--- 368
Query: 467 VEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLST 526
++ L RY H C CR A++ L
Sbjct: 369 -----------------------LLNKEALLERYHSHTEKCASCRQALRRI----QQLKF 401
Query: 527 AAALLTALAILGAGRQWRAFCLVSASLCLAGV 558
+LT LA+ A AF + + S+ L V
Sbjct: 402 LCGVLTILAL--ASSPLLAFLVETKSIVLVMV 431
>gi|425457635|ref|ZP_18837336.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9807]
gi|389800952|emb|CCI19818.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9807]
Length = 460
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 193/436 (44%), Gaps = 56/436 (12%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRL 173
G + +D + WYP+Y KD+ P T+ ++ +V++ D + E R +D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 174 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVKESQGV 230
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR++ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 231 VWVWMSQKTPPNPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
++V+ +P E G + + T +LPY L+EN++D +HIP +H
Sbjct: 131 LFVYAGNPENAPLTAIPIIEAMEEDGDAWICLDTFRDLPYSAVTLMENIIDSSHIPYTHH 190
Query: 289 RTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD 346
T R +A P+ E+ E +GF G W G K + F AP ++ ++ S
Sbjct: 191 LT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGQLGQQYSNFIAPGLIYHDLTS-- 246
Query: 347 NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQ 402
K G + + P QG+ L RF S +IKL P WY H + + + E
Sbjct: 247 EKFGR---TLTVVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILED 303
Query: 403 DMGFLSSQNEVLLKE---KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTIS 459
D FL Q L + + ++ Y ++ D V EYR W
Sbjct: 304 DQIFLYYQERYLQAQGGSQNFSQACYLPTKA-DLLVFEYRNW------------------ 344
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT 519
V A AG P++ L RY H +C C+ A+K N
Sbjct: 345 -------VNQYQADPFAG--QPFPSR-----QSKEILLERYHSHTKNCAVCQGALKNINR 390
Query: 520 WKNSLSTAAALLTALA 535
+ L+ A A++ L+
Sbjct: 391 LR-GLTLAIAIILGLS 405
>gi|218439150|ref|YP_002377479.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
gi|218171878|gb|ACK70611.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
Length = 474
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 204/474 (43%), Gaps = 63/474 (13%)
Query: 109 SEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQD 167
++E G +DW E WYP++ KD+ P T+ D+++V++ D + R D
Sbjct: 21 TDELPAGGLDANHFDWQEVWYPIHYVKDLDKTKPTPFTLLDRKLVIWWDKNASVWRVFDD 80
Query: 168 RCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQL--PADAKIPRSACVRTYEV 224
+CPHRLA LSEG++ + G +EC YHGW F G GKC IPQ +A+ + ACV +
Sbjct: 81 KCPHRLALLSEGRINEQGLIECPYHGWTFSGSGKCEFIPQQREGTNAEESKRACVTSLPT 140
Query: 225 KESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD-------VSTIHELPYDHSILLENL 277
QG+++ + P NP+ P + +D + T +LPYD LLEN+
Sbjct: 141 TVCQGLLFTY-----PGNPENAPKVKVPIIESLEDNSGEWVCIDTFRDLPYDALTLLENV 195
Query: 278 MDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV 337
+D +H+P +H T R +A P+ E+ + +GF G W ++G L +
Sbjct: 196 LDASHVPFTHHGT--VGNRNNAAPVELELVKSGRQGFTGIW---EEGPRKGTLGKQDTLF 250
Query: 338 LQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFH 393
+ N + D + + + + P +GK L RF +S +I L P WY H
Sbjct: 251 IAPNFMTHDLTSKQFGRTLTVVYATPISKGKCRLFARFPFQFSSKLPKFFINLTPRWYSH 310
Query: 394 QSASKVFEQDMGFLSSQNEVLLK---EKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMP 450
+ + + E D FL Q L + + TK Y ++ D +V R+W++
Sbjct: 311 TNQNTILEDDQIFLHYQERFLEEAGGSQNYTKACYLPTKA-DIYVNGLRQWVND------ 363
Query: 451 YYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGC 510
Y P P LP + L +RY+ H +HC C
Sbjct: 364 -YDAEPFKDQPLPPP----------------LPKE---------QLLDRYYSHTVHCGSC 397
Query: 511 RSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTA 564
A+ K +L A+ AL + +R F + L G+ S A
Sbjct: 398 SKALANIQRLKMALGILTAI--ALILTPLAVTYREFLPILTLWILTGISFMSGA 449
>gi|220908321|ref|YP_002483632.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7425]
gi|219864932|gb|ACL45271.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7425]
Length = 477
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 192/428 (44%), Gaps = 63/428 (14%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQ 180
++W E WYP++ D+ P T+ Q +VL+ D + E R D+CPHRLA LSEG+
Sbjct: 28 FNWHEAWYPVHYVVDLDRTQPTPFTLLGQDLVLWWDRQAESWRAFADQCPHRLAPLSEGR 87
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIP-QLPAD-AKIPRSACVRTYEVKESQGVVWVWMSQ 237
+ DG LEC YHGW F GEG+C +IP Q P A + ACV ++ QG+++V+
Sbjct: 88 IAEDGLLECPYHGWAFTGEGQCDRIPQQFPGQMAHTSKRACVTSFPTTVRQGLLFVYAGD 147
Query: 238 KTPPNPDK--LPWFENFARPGFQD---VSTIHELPYDHSILLENLMDPAHIPISHDRTDY 292
P N D+ +P QD ++T +LPYD LLEN++D +H+P +H R+
Sbjct: 148 --PANADRVSVPIIAALEESP-QDWVCLNTFRDLPYDALTLLENVLDSSHVPFTHHRS-- 202
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NKT 349
R +A P+ ++ E +GF G W G + F AP ++ ++ + +T
Sbjct: 203 VGNRANAAPVELDMLEFGKQGFQGFWQDGPRRGTLGSQTTTFIAPALMWHDLTTKQFGRT 262
Query: 350 GEKHYSTGLFLCRPTGQGKSMLIVR----FGTTGTSPWIKLFPDWYFHQSASKVFEQDMG 405
Y+T P +G+ L R FG+ + IKL P WY H + V E D
Sbjct: 263 LTAVYAT------PIRKGECRLFARFPFKFGSRLPALLIKLTPRWYAHIGNNNVLEDDQI 316
Query: 406 FLSSQNEVLLKEKVP---TKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPK 462
FL Q L + K Y R+ DT+V RKW+++ F ++S P
Sbjct: 317 FLHLQERYLEAQGGSANFAKACYLPTRA-DTYVTALRKWVNEYAANP---FPDDSLSPP- 371
Query: 463 VPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKN 522
+ L +RY H HC CR A+K K
Sbjct: 372 ----------------------------LSKEALLDRYHSHTRHCGSCRRALKTIQQLKW 403
Query: 523 SLSTAAAL 530
L A L
Sbjct: 404 GLGILAGL 411
>gi|427725393|ref|YP_007072670.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
gi|427357113|gb|AFY39836.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
Length = 439
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 206/432 (47%), Gaps = 51/432 (11%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLS 177
+ +++ ++WYP+ L +D+ AP +T+ + +V++K + + D+CPHRLA LS
Sbjct: 1 MTSFNFLQQWYPVALLEDLDPSAPKAITILGKPLVIWKPRAQQKYSVFLDKCPHRLAPLS 60
Query: 178 EGQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPR---SACVRTYEVKESQGVVW 232
EG++ + RL C YHGW+F+ G C +IPQL + + + CV ++ V+ Q ++W
Sbjct: 61 EGRIDEKSDRLMCSYHGWEFDEAGSCQRIPQLGQPEILEKRRDNFCVVSFPVQTEQDLLW 120
Query: 233 VWMSQKTPPNPDK--LPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
VW+ + TP + LP N + GF + ++ YD + L+EN++DP+H+P +H
Sbjct: 121 VWLDETTPDLAAEMPLPLSPNISETKGFVWSTYARDVDYDWTTLVENIVDPSHVPFAHH- 179
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKT 349
KRE A+PL FE+ G+ G N + F+ PC+++ + +
Sbjct: 180 -GLQGKREMAKPLTFEIISSEMTCIE---GKVTSGFKTN-ITFKPPCLVEYE---IPFPS 231
Query: 350 GEKHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMGFL 407
G++ GL C PT GK+ LI F +L P W+ H Q+ + V + DM L
Sbjct: 232 GKQ---VGLVTYCVPTSPGKARLIAFFVRNFAKQLGRLIPRWWEHRQTRNAVIDSDMIIL 288
Query: 408 SSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG-MPYYFGHSTISLPKVPAV 466
Q + K+ Y D +V E+R+W D+ G +P+ ++ + P
Sbjct: 289 QRQEYFNHQSSESWKDAYKMPAEADRFVIEFRRWFDQHCEGKLPW----ESLGIKPQPLP 344
Query: 467 VEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLST 526
+E P + +RY +H HC C+ A+K K L T
Sbjct: 345 IE----------------------TDRPVVLDRYRQHTQHCSSCKGALKNTKLAKRILVT 382
Query: 527 AA-ALLTALAIL 537
A A + A AIL
Sbjct: 383 MAIASVAATAIL 394
>gi|427729894|ref|YP_007076131.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427365813|gb|AFY48534.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 469
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 206/467 (44%), Gaps = 65/467 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSEGQ 180
+DW E WYP++ +D+ P T+ ++ IVL+ D + R D+CPHRLA LSEG+
Sbjct: 27 FDWQEVWYPVHYVEDLDKSQPTRFTLLERDIVLWWDKNEQTWRAFADQCPHRLAPLSEGR 86
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVW--- 234
+ DG LEC YHGW F G GKC +IPQ A K S ACV + QG+++V+
Sbjct: 87 INEDGWLECPYHGWAFSGTGKCERIPQQAAGDKAETSLRACVNSLPTTVRQGLLFVYPGR 146
Query: 235 ---MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
+Q T P D L E A G+ ++T ++PYD L+EN++D +HIP +H RT
Sbjct: 147 AENAAQTTVPIVDAL---EEDA-DGWVCLNTFRDIPYDALTLMENVLDSSHIPYTHHRT- 201
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NK 348
R + P+ EV E GF G W G K F AP ++ ++ S +
Sbjct: 202 -VGNRANVSPVNLEVVESGKWGFKGIWEEGPRKGTLGKQDTTFIAPGLMWHDLTSKQFGR 260
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDM 404
T Y+T P +G+ L RF +S +IKL P WY H + V E D
Sbjct: 261 TLTVVYAT------PIRKGECRLFARFPFKFSSKIPGLFIKLTPRWYSHIGQNGVLEDDQ 314
Query: 405 GFLSSQNEVLLKEKVPTKEL---YFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLP 461
FL Q E L+++ + L ++ D +VA+ W + H P F T++ P
Sbjct: 315 IFLHYQ-ERYLEQRGGSANLNKAFYLPTKADAFVAQLHSWRQQY-HAEP--FPGQTLTPP 370
Query: 462 KVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWK 521
+ L +RY H C CR+A+K F +
Sbjct: 371 -----------------------------LTKEALLDRYHSHTKQCASCRTALKNFQRLR 401
Query: 522 NSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMN 568
+ A L +L L Q + + + +A V T +
Sbjct: 402 VGVGIATVLAWSLLPLLILMQEQPSVITGIVVTVAVVLGAGTWFGLG 448
>gi|332708372|ref|ZP_08428350.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
gi|332352865|gb|EGJ32427.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
Length = 478
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 189/424 (44%), Gaps = 57/424 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSEGQ 180
+DW E WYP++ +D+ P T+ +Q IVL+ D ++ R D+CPHRLA LSEG+
Sbjct: 29 FDWEEVWYPVFYVEDLDKSQPTRFTLLEQDIVLWWDKHEQMWRAFVDQCPHRLAPLSEGR 88
Query: 181 L-IDGRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGVVWVWMSQ 237
+ DGRLEC YHGW F G G+C IPQ A+I + ACV + K +QG+++V+
Sbjct: 89 INQDGRLECPYHGWAFSGTGQCEVIPQQKERGKAEISQRACVNSLPTKIAQGLLFVYPGL 148
Query: 238 KTPPNPDKLPWFENFAR--PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
K+P + G+ ++T +LPYD L+EN++DP+HIP +H R+
Sbjct: 149 AENAAKTKVPIVDALEEDPDGWVCLNTFRDLPYDALTLMENVLDPSHIPYTHHRS--VGN 206
Query: 296 REDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NKTGEK 352
R + P+ EV E GF G W G K F AP ++ ++ S +T
Sbjct: 207 RANVSPVELEVVESGKCGFKGVWAEGPRKGTLGRQDTTFIAPGLMWHDLTSKQFGRTLTV 266
Query: 353 HYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGFLS 408
Y+T P +G+ L RF +S ++KL P WY H + V E D FL
Sbjct: 267 VYAT------PIRKGECRLFARFPFKFSSKLPRLFLKLTPRWYSHIGQNNVLEDDQIFLH 320
Query: 409 SQNEVLLKEKVP---TKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPA 465
Q + ++ K Y ++ D +V + R W++ H +I
Sbjct: 321 YQERYIEQQGGSGNFNKAFYLPTKA-DLFVFQLRFWVN-----------HYSID------ 362
Query: 466 VVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLS 525
P K ++ L RY H C CR A+ + L+
Sbjct: 363 ---------------PFPGKTLPPSLPKEVLLERYHSHTQKCASCRGALGNLQRLRLGLA 407
Query: 526 TAAA 529
A
Sbjct: 408 VGTA 411
>gi|116780249|gb|ABK21605.1| unknown [Picea sitchensis]
Length = 180
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 108/159 (67%), Gaps = 20/159 (12%)
Query: 64 VISPIKAHKL------RKRTEPKLT-KCH---AVTDMSSSAVPTP-----DDHKVLVGPA 108
V SP+ KL ++RT P+ + CH A M + A+ T +D ++L+
Sbjct: 25 VDSPVPIRKLFNVNKNKRRTHPRSSVNCHPFNAKCRMRAEAMSTARTLESEDGEILIKEE 84
Query: 109 SEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDR 168
+R E Y+W EWYPLYL +VP DAPLGLTVFD+Q+VLY+DG G L+C++DR
Sbjct: 85 GPLYNRNE-----YNWENEWYPLYLAAEVPKDAPLGLTVFDKQLVLYEDGNGVLQCYEDR 139
Query: 169 CPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQL 207
CPHR AKLSEGQL++GRLECLYHGWQFEG+GKCVKIPQ+
Sbjct: 140 CPHRAAKLSEGQLMEGRLECLYHGWQFEGDGKCVKIPQV 178
>gi|425444769|ref|ZP_18824812.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9443]
gi|389735432|emb|CCI01073.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9443]
Length = 460
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 167/345 (48%), Gaps = 23/345 (6%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRL 173
G + +D + WYP+Y KD+ P T+ ++ +V++ D + E R +D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 174 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVKESQGV 230
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR++ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 231 VWVWMSQKTPPNPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
++V+ +P E G + + T +LPY L+EN++D +HIP +H
Sbjct: 131 LFVYAGNPENAPLTAIPIIEAMEEDGDAWICLDTFRDLPYSAVTLIENIIDSSHIPYTHH 190
Query: 289 RTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD 346
T R +A P+ E+ E +GF G W G K + F P ++ ++ S
Sbjct: 191 LT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGQLGQQYSNFIVPGLIYHDLTS-- 246
Query: 347 NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQ 402
K G + + P QG+ L RF S +IKL P WY H + + + E
Sbjct: 247 EKFGR---TLTVVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILED 303
Query: 403 DMGFLSSQNEVLLKE---KVPTKELYFNLRSIDTWVAEYRKWMDK 444
D FL Q L + + ++ Y ++ D V EYR W+++
Sbjct: 304 DQIFLYYQERYLQAQGGSQNFSQACYLPTKA-DLLVFEYRNWVNQ 347
>gi|158336046|ref|YP_001517220.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
gi|158306287|gb|ABW27904.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
Length = 458
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 200/462 (43%), Gaps = 63/462 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLSEGQ 180
+++ ++WYP+ +D+ P +T+ Q V+++ G+ QD CPHRLA LSEG+
Sbjct: 16 FNFWQQWYPVAPLEDLDPQRPTPITLLGQHFVIWQPKDSGQYLVFQDLCPHRLAPLSEGR 75
Query: 181 LID--GRLECLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQ 237
+ D G+L C YHGWQF+ +G C IPQ A ++ + CV + G++WVW
Sbjct: 76 IDDQTGQLMCSYHGWQFDQQGLCTHIPQAEAVTSQQSQLYCVTVIPTQAHSGLLWVW--- 132
Query: 238 KTPPNPDK--------LPWF------ENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 283
P+PD LP +NF F + +L YD L+ENL DP+H+
Sbjct: 133 ---PDPDTQDVAATQPLPLSPLVDADQNFVYSSF-----MRDLAYDWQTLVENLSDPSHV 184
Query: 284 PISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRE 343
P +H R A P+ EV T Q G + F+ PC R
Sbjct: 185 PFAHHGV--QGNRNQAAPIPMEVLTSTPELIEVQ----TTGKFSTNITFQPPC-----RM 233
Query: 344 SVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQ-SASKVFEQ 402
G+ +T + C P G+S ++ F + +K+ P W H + + V +
Sbjct: 234 EYQFSIGDGKQATMVTYCIPIAPGRSRIVALFARNFATGLMKVIPRWVEHMLNRNPVLDG 293
Query: 403 DMGFLSSQNEVLLKE-KVPTKELYFNL-RSIDTWVAEYRKWMDKAGHGMPYYFGHSTISL 460
DM L SQ + LL+ + + + L S D V EYR+W +K HG
Sbjct: 294 DMILLRSQEKQLLQHTQTQNWQTTYKLPTSADRLVIEYRRWFEKYSHG------------ 341
Query: 461 PKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTW 520
++P + + A L G P L +RY +H + C CR A+
Sbjct: 342 -QIPWGSADGQIPVASNNYAYLQPLGE----QRPQLLDRYHQHTLICSSCRGALSRIKQL 396
Query: 521 KNSLSTAAAL-LTALAILGAGRQ--WRAFCLVSASLCLAGVY 559
+ L A+ ++ AIL + W +++A L L G Y
Sbjct: 397 QKMLVAVFAIAISGAAILPDDLRATWGIPLVITALLGLGGCY 438
>gi|428775230|ref|YP_007167017.1| Pheophorbide a oxygenase [Halothece sp. PCC 7418]
gi|428689509|gb|AFZ42803.1| Pheophorbide a oxygenase [Halothece sp. PCC 7418]
Length = 440
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 205/460 (44%), Gaps = 61/460 (13%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLSE 178
A +++ + WYPL D+ D P+ + Q I ++K G R DRCPHRLA LSE
Sbjct: 3 ATFNFFQHWYPLLPVADLVSDRPISTHLLGQPIAIWKPTGSSHYRAFLDRCPHRLAPLSE 62
Query: 179 GQL--IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVK----ESQGVVW 232
G++ G LEC YHGWQF+ G C KIPQ +A++ C + + + W
Sbjct: 63 GRVDPKTGHLECCYHGWQFDENGTCTKIPQ-AENAELLERNCEQLRATALPTCVANDLFW 121
Query: 233 VW-------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 285
VW ++ KTP + P +N GF S + +LPYD L+EN+ DP+H+P
Sbjct: 122 VWPDPDSAELAAKTPLSLS--PKIDN--SKGFLWSSYVRDLPYDWQTLVENIADPSHVPF 177
Query: 286 SHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESV 345
+H S RE A P+ E+ E T Q D + P+ + FE PC L+
Sbjct: 178 AHHGVQGS--RESATPIPMEIREATPERIVAQ----IDRNFPSTMTFEPPCRLE-----Y 226
Query: 346 DNKTGEKHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQD 403
+ G + GL C PT GKS ++ +F L P W+ H + V + D
Sbjct: 227 AIQLGSEEKQIGLITYCIPTAPGKSRIVAQFARNFALRAKDLTPRWWEHIRLRHLVLDGD 286
Query: 404 MGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMD-KAGHGMPYYFGHSTISLPK 462
M L Q E L+E+ K Y + D +V +RKW + +P+ ST++ P
Sbjct: 287 MVLLHCQ-EAALREEGHWKSAYMMPTNADRFVIAFRKWFENNCDQYIPWQGVGSTVAPP- 344
Query: 463 VPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWK- 521
+ + A+ + L +RY +H C C+ A+K K
Sbjct: 345 -----------------SPVEARREV-------LLDRYHQHTQICPDCQGALKRIQQLKV 380
Query: 522 NSLSTAAALLTALAIL-GAGRQWRAFCLVSASLCLAGVYA 560
+L T A L+ +A+L A R + +L AG++
Sbjct: 381 GTLVTTAILVFVIALLPDASRLSVGLPFCAIALFSAGIWG 420
>gi|166365800|ref|YP_001658073.1| pheophorbide a oxygenase [Microcystis aeruginosa NIES-843]
gi|166088173|dbj|BAG02881.1| pheophorbide a oxygenase [Microcystis aeruginosa NIES-843]
Length = 460
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 170/350 (48%), Gaps = 33/350 (9%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRL 173
G + +D + WYP+Y KD+ P T+ ++ +V++ D + E R +D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 174 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVKESQGV 230
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR++ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 231 VWVWMSQKTPPNPDKLPWFENFARPGFQD------VSTIHELPYDHSILLENLMDPAHIP 284
++V+ +P E P +D + T +LPY L+EN++D +H+P
Sbjct: 131 LFVYAGNPENAPLTAIPIIE----PMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVP 186
Query: 285 ISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNR 342
+H T R +A P+ E+ E +GF G W G K + F AP + ++
Sbjct: 187 YTHHLT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGKLGQQYSNFIAPGFIYHDL 244
Query: 343 ESVD-NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSAS 397
S +T Y+T P QG+ L RF S +IKL P WY H + +
Sbjct: 245 TSEKFGRTLTAVYAT------PIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQN 298
Query: 398 KVFEQDMGFLSSQNEVLLKE---KVPTKELYFNLRSIDTWVAEYRKWMDK 444
+ E D FL Q L + + ++ Y ++ D +V EYR W+++
Sbjct: 299 AILEDDQIFLYYQERYLQAQGDSRNFSQACYLPTKA-DLFVFEYRNWVNQ 347
>gi|425442274|ref|ZP_18822528.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9717]
gi|389716788|emb|CCH99015.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9717]
Length = 460
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 170/350 (48%), Gaps = 33/350 (9%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRL 173
G + +D + WYP+Y KD+ P T+ ++ +V++ D + E R +D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 174 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVKESQGV 230
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR++ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 231 VWVWMSQKTPPNPDKLPWFENFARPGFQD------VSTIHELPYDHSILLENLMDPAHIP 284
++V+ +P E P +D + T +LPY L+EN++D +H+P
Sbjct: 131 LFVYAGNPENAPLTAIPIIE----PMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVP 186
Query: 285 ISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNR 342
+H T R +A P+ E+ E +GF G W G K + F AP + ++
Sbjct: 187 YTHHLT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGKLGQQYSNFIAPGFIYHDL 244
Query: 343 ESVD-NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSAS 397
S +T Y+T P QG+ L RF S +IKL P WY H + +
Sbjct: 245 TSEKFGRTLTAVYAT------PIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQN 298
Query: 398 KVFEQDMGFLSSQNEVLLKE---KVPTKELYFNLRSIDTWVAEYRKWMDK 444
+ E D FL Q L + + ++ Y ++ D +V EYR W+++
Sbjct: 299 AILEDDQIFLYYQERYLQAQGDSRNFSQACYLPTKA-DLFVFEYRNWVNQ 347
>gi|222626003|gb|EEE60135.1| hypothetical protein OsJ_13022 [Oryza sativa Japonica Group]
Length = 548
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 191/478 (39%), Gaps = 84/478 (17%)
Query: 107 PASEEESR----GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL 162
P EE R GE R +DW ++WYP+ D+ P G V ++V + DG GE
Sbjct: 66 PPVAEEVRAPAAGEER---FDWLDQWYPVAPVCDLDPRKPHGKMVLGLRVVAWFDGGGEW 122
Query: 163 RCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSAC 218
R D CPHRLA LSEG++ GRL+C YHGW F+G G C IPQ PA AC
Sbjct: 123 RVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSKAC 182
Query: 219 VRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSIL 273
V +Y ++W + + P D L P+F + P F V + + PY + +L
Sbjct: 183 VASYPSVVQNNILWFY-PRTEPEYRDVLQRKRPPYFPDLDDPSFNTVFGVRDFPYGYDML 241
Query: 274 LENLMDPAHIPISH--------DRTD-----------YSAKREDAQPLGFEVTERTDRGF 314
+ENLMDPAH+P +H D+ D +E P+ ++ E GF
Sbjct: 242 VENLMDPAHVPYAHKGLFPQFQDKEDPGRYNIHLLSTVEFDQERGGPVKMKIEEANIDGF 301
Query: 315 AGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG----------LFLCRPT 364
G RF APC + NR + +T H+ +FLC P
Sbjct: 302 LSIQGENW-----GHFRFIAPCTI--NRSELPLET-LAHFDQEKQQQQPQGMLVFLCIPV 353
Query: 365 GQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVP--TK 422
G+S +I F + ++ K P W H + V + D+ L + V K
Sbjct: 354 APGRSRVIWVFPQSVSAWPDKFIPRWLHHMVTNTVLDSDLYLLHIEERNFAAVGVDKWQK 413
Query: 423 ELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASL 482
Y S D + +R W K Y H G + L
Sbjct: 414 ACYVPTLS-DNMIITFRNWFRK-------YCKHQV---------------GWATPMVNQL 450
Query: 483 PAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAG 540
P T L RY+ HV+ C C +A+K + +L A+ + G G
Sbjct: 451 PT-----TPTKDQLMERYWSHVMQCTSCSAALKWMRAMEVALQVASVAVVGFLAAGKG 503
>gi|307107873|gb|EFN56114.1| hypothetical protein CHLNCDRAFT_51738 [Chlorella variabilis]
Length = 553
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 174/441 (39%), Gaps = 73/441 (16%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
W ++WYP+ + D+P D P T+F +Q+VL++D G RC QD CPHRLA LSEG++++
Sbjct: 83 WLQQWYPVAVAADLPTDRPHPFTLFGRQLVLWRDAAGAWRCFQDACPHRLAPLSEGRVVE 142
Query: 184 GRLECLYHGWQFEGEGKCVKIPQL-----PADAKIPRSACVRTYEVKESQGVVWVW---- 234
G+L C YHGW FEG GKC ++PQ A A R AC T E+ G+VWVW
Sbjct: 143 GQLVCSYHGWSFEGTGKCTRVPQAMDERSEAAACGSRRACAATQPTAEAAGLVWVWPDAS 202
Query: 235 -------MSQKTPPNPDKL----PWFENFARPGFQDVS---TIHELPYDHSILLENLMDP 280
+ P +PD L F ++ + E PY ++EN++DP
Sbjct: 203 PGAPEQAAAAPLPVHPDLLAGGAGGGATPGSGSFVNIGGGWLVRECPYGFDTMIENILDP 262
Query: 281 AHIPISHDRTDYSAKREDAQPLGFEVTERT--DRGFAGQWG--REKDGSMPNFLRFEAPC 336
H+ + +REDA P ++ + GFA G K L F PC
Sbjct: 263 GHVMWAPH--GLLGRREDAVPYAVKLQGEISLEGGFATSLGASSRKLEVQRRSLEFRPPC 320
Query: 337 VLQNNRESVDNKTGEKHY---------STGLFLCR---PTGQGKSMLIVR------FGTT 378
++ + G + + L C P+ G +L+ G
Sbjct: 321 FVRQTIAPGELGPGPTGWLPPCHAPSKGSSLVTCGYAVPSRPGHCLLVTTSYAEAGSGAG 380
Query: 379 GTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEY 438
G + L P W H +V + D+ L Q L K + +F D V +
Sbjct: 381 GLRAALGLVPRWLLHVYTQEVLDGDLILLHGQERRLEKAGGSWRSAFFMPTPSDGAVVAF 440
Query: 439 RKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLAN 498
R+W D G+ LP E L +
Sbjct: 441 RRWFDDMAGGVGGLPWAGGGGLPPEEESKE--------------------------KLLD 474
Query: 499 RYFRHVIHCKGCRSAVKAFNT 519
R +H HC C +A+ T
Sbjct: 475 RLHQHTQHCPSCSAALARART 495
>gi|428772546|ref|YP_007164334.1| Pheophorbide a oxygenase [Cyanobacterium stanieri PCC 7202]
gi|428686825|gb|AFZ46685.1| Pheophorbide a oxygenase [Cyanobacterium stanieri PCC 7202]
Length = 465
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 196/435 (45%), Gaps = 67/435 (15%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEG 179
++++ E WYP++ +D+ + P T+ ++ IV++ + K + R D+CPHRLA L+EG
Sbjct: 24 NFNYQEVWYPVFFVEDLEKNRPNSFTLLEEDIVIWWEEKTSQWRVFTDKCPHRLAPLTEG 83
Query: 180 QLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMS 236
++ + G LEC YHGW F GEG C IPQ + + S ACVR Y K Q +++V+
Sbjct: 84 RINEEGLLECPYHGWAFSGEGDCEVIPQQQENQRAHTSSRACVRAYPCKVEQDLLFVYAG 143
Query: 237 QKTPPNPDKLPWFENFARPGFQD------VSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P N DK P P +D ++T ++PY LLEN++D +HIP +H +
Sbjct: 144 --NPDNADKTPI--PIVGPLEEDKDKWLVLNTFRDIPYSALTLLENVLDSSHIPYTHHGS 199
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-N 347
R + + E+ +GF G W G K + F AP ++ ++ S
Sbjct: 200 --VGDRTNVSTVELEIISSNRQGFNGVWQEGPRKGKLGSQYTTFVAPNLMWHDLTSKQFG 257
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQD 403
+T Y+T P +GK L RF +S +IKL P WY H + + + E D
Sbjct: 258 RTMTVVYAT------PISKGKCRLFARFPFQFSSKIPQFFIKLTPRWYSHLNQNAILEDD 311
Query: 404 MGFLSSQNEVLLKEKVPTKELY----FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTIS 459
FL Q L EK+ E Y + D +V E+R+W++K + F H +
Sbjct: 312 QIFLHYQERYL--EKLGGSEKYEKACYLPTKADLYVTEFRQWVNKYNAEL---FPHQNL- 365
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT 519
PA H L RY H C CR A+K
Sbjct: 366 ----PATPTHE------------------------TLLERYHSHTEKCSSCRQALKNIQK 397
Query: 520 WKNSLSTAAALLTAL 534
+ L +A++ ++
Sbjct: 398 IRQILIIFSAIIWSI 412
>gi|425466450|ref|ZP_18845748.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9809]
gi|389831010|emb|CCI26578.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9809]
Length = 460
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 170/350 (48%), Gaps = 33/350 (9%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRL 173
G + +D + WYP+Y KD+ P T+ ++ +V++ D + E R +D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 174 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVKESQGV 230
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR++ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 231 VWVWMSQKTPPNPDKLPWFENFARPGFQD------VSTIHELPYDHSILLENLMDPAHIP 284
++V+ +P E P +D + T +LPY L+EN++D +H+P
Sbjct: 131 LFVYAGNPENAPLTAIPIIE----PMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVP 186
Query: 285 ISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNR 342
+H T R +A P+ E+ E +GF G W G K + F AP ++ ++
Sbjct: 187 YTHHLT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGKLGQQYSNFIAPGLIYHDL 244
Query: 343 ESVD-NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSAS 397
S +T Y+T P QG+ L RF S +IKL P WY H + +
Sbjct: 245 TSEKFGRTLTAVYAT------PIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQN 298
Query: 398 KVFEQDMGFLSSQNEVLLKE---KVPTKELYFNLRSIDTWVAEYRKWMDK 444
+ E D FL Q L + + ++ Y ++ D V EYR W+++
Sbjct: 299 AILEDDQIFLYYQERYLQAQGDSRNFSQACYLPTKA-DLLVFEYRNWVNQ 347
>gi|254409954|ref|ZP_05023734.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182990|gb|EDX77974.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 446
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 204/463 (44%), Gaps = 70/463 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQ 180
+D TE WYP++ KD+ P T+ + +V++ D + R D+CPHRLA LS+G+
Sbjct: 5 FDHTEAWYPVHYLKDLDQSQPTQFTLLGRDLVIWWDKVADRWRVFDDQCPHRLAPLSQGR 64
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVKESQGVVWVWMSQ 237
+ DG LEC YHGW F G G C +IPQ D A+ + ACV E QG+++V+
Sbjct: 65 IAEDGLLECPYHGWAFTGAGTCDRIPQQTEDSSAQTSQRACVTALPTTECQGLLFVY--- 121
Query: 238 KTPPNPD-----KLPWFE--NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P NP+ K+P E + + G+ + T +LPYD LLEN++D +H+P +H R+
Sbjct: 122 --PGNPENAPNVKVPIVEPLDDSPEGWVCIDTFRDLPYDALTLLENVLDVSHVPFTHHRS 179
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-N 347
+ R A P+ EVTE +GF G W G K F AP ++ ++ S
Sbjct: 180 --VSDRAYASPVELEVTESGKQGFKGVWEQGPRKGTLGRQDTTFLAPTLMWHDLTSKQFG 237
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQD 403
+T Y+T P +G+ L RF S +IKL P WY H + V E D
Sbjct: 238 RTMTVVYAT------PIRKGECRLFARFPFKFASKLPGFFIKLTPRWYSHIGQNGVLEDD 291
Query: 404 MGFLSSQNEVLLKEKVP---TKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISL 460
FL Q L + +K Y ++ D +V E R+W+++ Y
Sbjct: 292 QIFLHYQEHYLESKGGSANFSKAFYLPTKA-DRFVFELRQWVNQ-------YNADPFTDQ 343
Query: 461 PKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSA---VKAF 517
P P + + L +RY H + CK C +A ++
Sbjct: 344 PLPPRLSQE-------------------------TLLDRYHSHTVKCKSCSTALVRIRQI 378
Query: 518 NTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYA 560
W + A + L L + +VS+ + L +
Sbjct: 379 RRWVAVVGAMAWAIIPLLALFFDKTATVAAIVSSGVALIAGFG 421
>gi|302816087|ref|XP_002989723.1| hypothetical protein SELMODRAFT_130316 [Selaginella moellendorffii]
gi|300142500|gb|EFJ09200.1| hypothetical protein SELMODRAFT_130316 [Selaginella moellendorffii]
Length = 500
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 178/418 (42%), Gaps = 46/418 (11%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDR 168
EE +R +DW EWYP+ + +++ P +T+ ++V++ D G+ + D+
Sbjct: 61 EEALEQTKRSTWFDWNSEWYPVAIEQELDKGVPHAVTILGNELVVWWDRNGKNWQVFSDK 120
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFE-GEGKCVKIPQL-PADAKIPRS--ACVRTYE 223
CPHRLA LSEG++ + G ++C YHGW F G G C +IPQ P D + S AC Y
Sbjct: 121 CPHRLAPLSEGRIAENGHIQCSYHGWMFAPGTGSCSRIPQAQPGDLSVRLSPRACATVYP 180
Query: 224 VKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 283
E QG++W+ S + + K P+F F ++PY + L+ENLMDP H+
Sbjct: 181 SMEQQGILWMNFS-ASASSQIKPPFFPVLEDADFVHYWATSDVPYGYEALIENLMDPTHV 239
Query: 284 PISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVL---QN 340
P +H + R P+ + V + GF G GR MP L F + Q
Sbjct: 240 PFAHHKLQ--GNRNKTGPVSYTVNKFDRHGFKGSTGRGDVVFMPP-LSFVMEIRIPPKQK 296
Query: 341 NRESVDNKTGEKHYST-GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKV 399
+ +K E T +F+C P G+S F P W H V
Sbjct: 297 VLSKLSSKLEESDKITYTVFMCVPVLPGRSKAFWSFPRNFAKSIHFYTPRWLAHLRHMLV 356
Query: 400 FEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTIS 459
+ D+ L ++++K E F S D +V +R+W+ G P Y H
Sbjct: 357 LDSDLYLLH-----IMEQKQERNEREFTPTSADAFVLGFRRWLSVYAGGAPGYAPHIDRK 411
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAF 517
LP P P L +RY HV C C +A+++F
Sbjct: 412 LPSSPP---------------------------KPQLMDRYENHVKRCPTCMAALRSF 442
>gi|318040272|ref|ZP_07972228.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
CB0101]
Length = 437
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 181/403 (44%), Gaps = 55/403 (13%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL-YKDGKGELRCHQDRCPHRLAKLSEGQLI 182
WT WY + +D+ P T+ + +VL ++ G+ R D CPHRL LS+G+L
Sbjct: 11 WTHAWYAVAFLRDLDPKRPTPFTLMGEDLVLWFERSSGQWRALADVCPHRLVPLSDGRLN 70
Query: 183 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKI-PRSACVRTYEVKESQGVVWVWMSQKTP 240
+ G LEC YHGW F GEG+C IPQ + I PRS C R Y QG+++V+
Sbjct: 71 EAGELECPYHGWTFNGEGRCTAIPQAQEGSTISPRSHC-RGYATATGQGLLFVFSGDIAE 129
Query: 241 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
LP +PG+ T +LP D LLEN++D +H+P +H T +RE+A
Sbjct: 130 AADHPLPLVPEIDQPGWLVQDTFRDLPMDALTLLENVLDVSHVPFTHHAT--VGRRENAG 187
Query: 301 PLGFEVTERTDRGFAGQWG----REKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYST 356
P+ E+ GF G W R K GS F + APC++ + + K + ++
Sbjct: 188 PVELELNSFGPEGFTGVWQEGPRRGKLGS--EFTTYAAPCLMWHE---LTAKGFARIFT- 241
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPW----IKLFPDWYFHQSASKVFEQDMGFLSSQNE 412
+ P +G+ LI RF SPW ++L P+W H V E D FL Q
Sbjct: 242 -VVYATPIRRGECRLITRFPFKFNSPWPARLLRLRPEWLQHLGNHVVLEDDQLFLHWQER 300
Query: 413 VLLKEKVPTKELY-FNLR-SIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHA 470
VL + + F+L S D +V W+++ G G P+ P P
Sbjct: 301 VLEQRGGSQDAMRSFHLSTSADRYVQALHDWVNRYG-GEPF---------PGEP------ 344
Query: 471 PAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSA 513
LP + G HA L RY H HC+ C A
Sbjct: 345 -----------LPPRQG---RHA--LMERYEAHTRHCRSCSGA 371
>gi|427734356|ref|YP_007053900.1| Rieske (2Fe-2S) domain-containing protein [Rivularia sp. PCC 7116]
gi|427369397|gb|AFY53353.1| Rieske (2Fe-2S) domain-containing protein [Rivularia sp. PCC 7116]
Length = 445
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 194/433 (44%), Gaps = 50/433 (11%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
+++++ WYP+ +D+ P +TV ++V++K + R D+CPHRLA LSEG
Sbjct: 3 SEFNFFGHWYPVSPVEDIDPKKPTAVTVLGLRLVIWKPKLSDYRVFLDKCPHRLAPLSEG 62
Query: 180 QLID--GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWVW 234
++ + G L C YHGW+F+ EG C +IPQ K ++ C + V++ ++WVW
Sbjct: 63 RVDEKTGNLMCSYHGWEFDAEGICTRIPQAENPQLVTKNQKNLCAVSLPVRQENDLLWVW 122
Query: 235 MSQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
+ +P N LP A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 123 LDANSPQLANDTPLPLSPQVDANKGFVWSSYVRDLEYDWQTLVENVADPSHVPFTHHGV- 181
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGE 351
RE A P+ ++ + T A G + FE PC L+ + G+
Sbjct: 182 -QGNREQASPVILQIVKST----ANLIEATSSGRFQTTITFEPPCRLEYTI-----RVGD 231
Query: 352 KHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMGFLSS 409
+ GL C PT GKS ++ +F + ++ P W+ H + +KV + DM L
Sbjct: 232 EGKQLGLVTYCIPTYPGKSRIVAQFTRNFATNLNRIIPRWWSHIKIRNKVLDGDMILLHQ 291
Query: 410 QNEVLLKEKVPT--KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVP--A 465
Q L + + K Y S D + E+R W DK G K+P
Sbjct: 292 QEHFLQERQSQESWKTAYQLPTSADRLIIEFRNWFDKYSQG-------------KLPWDE 338
Query: 466 VVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL- 524
V P ++ + L +RY +H +C CR A+K + L
Sbjct: 339 VGIQVPQNCTLTINE-----------NRQQLLDRYKQHTQNCSSCRKALKNSQRLQVFLV 387
Query: 525 STAAALLTALAIL 537
+ A L++ +AIL
Sbjct: 388 AYFAILISVIAIL 400
>gi|427730536|ref|YP_007076773.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
gi|427366455|gb|AFY49176.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
Length = 443
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 190/435 (43%), Gaps = 56/435 (12%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSE 178
A++++ + WYP+ +D+ P +TV ++V++K E R D+CPHRLA LSE
Sbjct: 3 AEFNFFQNWYPVSPIEDLDPQKPTPVTVLGLRLVIWKPKSSETYRVFLDQCPHRLAPLSE 62
Query: 179 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 233
G++ + G L C YHGWQF+ +G C +IPQ + ++ CV T V+++ ++WV
Sbjct: 63 GRIDEQTGNLMCSYHGWQFDAQGTCTQIPQAENPELVTKNQNNFCVTTLPVRQANDLLWV 122
Query: 234 WMSQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
W+ ++P LP A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 123 WLDAQSPELAAAQALPLSPQVDANKGFVWSSFVRDLEYDWQTLVENVADPSHVPFAHHGV 182
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
RE A+P+ + + T A G + FE PC R G
Sbjct: 183 --QGNREKARPIPISIVQST----ANLIEAVTTGGFQTKITFEPPC-----RLEYAISFG 231
Query: 351 EKHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMGFLS 408
+ GL C P GKS ++ +F + P W+ H + + V + DM L
Sbjct: 232 DAGKQVGLITYCIPVAPGKSRIVAQFTRNFAKTLHRFIPRWWDHITNRNAVLDGDM-ILL 290
Query: 409 SQNEVLLKEKVPT---KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPA 465
Q E L++K T K Y S D V E+RKW D G LP
Sbjct: 291 QQQEYFLQQKQLTESWKTAYQLPTSADRLVIEFRKWFDVYCRG----------QLPWSEV 340
Query: 466 VVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLS 525
+ HA + + + +RY +H HC CR+A+ KN
Sbjct: 341 GISHAEYSTINSDRSV--------------ILDRYKQHTQHCSSCRNAL------KNIQR 380
Query: 526 TAAALLTALAILGAG 540
+ LL AI AG
Sbjct: 381 SQIILLAYSAITIAG 395
>gi|390438979|ref|ZP_10227404.1| Pheophorbide a oxygenase [Microcystis sp. T1-4]
gi|389837609|emb|CCI31528.1| Pheophorbide a oxygenase [Microcystis sp. T1-4]
Length = 459
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 167/346 (48%), Gaps = 25/346 (7%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRL 173
G + +D + WYP+Y KD+ P T+ ++ +V++ D + E R +D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 174 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVKESQGV 230
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR+ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSLPTAIRQGL 130
Query: 231 VWVWMSQKTPPNPDKLPWFENFAR--PGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
++V+ +P E + + T +LPY L+EN++D +H+P +H
Sbjct: 131 LFVYAGNPENAPLTAIPIIEPLEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHH 190
Query: 289 RTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD 346
T R +A P+ E+ E +GF G W G K + F AP ++ ++ S
Sbjct: 191 LT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGQLGQQYSNFIAPGLIYHDLTSEK 248
Query: 347 -NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFE 401
+T Y+T P QG+ L RF S +IKL P WY H + + + E
Sbjct: 249 FGRTLTAVYAT------PIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILE 302
Query: 402 QDMGFLSSQNEVLLKE---KVPTKELYFNLRSIDTWVAEYRKWMDK 444
D FL Q L + ++ Y ++ D +V EYR W+++
Sbjct: 303 DDQIFLYYQERYLQARGDSRNFSQACYLPTKA-DLFVFEYRNWVNQ 347
>gi|422302482|ref|ZP_16389845.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9806]
gi|389788306|emb|CCI16148.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9806]
Length = 460
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 193/437 (44%), Gaps = 66/437 (15%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRL 173
G + +D + WYP+Y KD+ P T+ ++ +V++ D + E R +D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 174 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVKESQGV 230
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR+ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSLPTAIRQGL 130
Query: 231 VWVWMSQKTPPNPDKLPWFENFARPGFQD------VSTIHELPYDHSILLENLMDPAHIP 284
++V+ +P E P +D + T +LPY L+EN++D +H+P
Sbjct: 131 LFVYAGNPENAPLTAIPIIE----PMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVP 186
Query: 285 ISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNR 342
+H T R +A P+ E+ E +GF G W G K + F AP ++ ++
Sbjct: 187 YTHHLT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGQLGQQYSNFIAPGLIYHDL 244
Query: 343 ESVD-NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSAS 397
S +T Y+T P QG+ L RF S +IKL P WY H + +
Sbjct: 245 TSEKFGRTLTAVYAT------PIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQN 298
Query: 398 KVFEQDMGFLSSQNEVLLKE---KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFG 454
+ E D FL Q L + + ++ Y ++ D V EYR W+++ Y
Sbjct: 299 AILEDDQIFLYYQERYLQAQGDSRNFSQACYLPTKA-DLLVFEYRNWVNQ-------YQA 350
Query: 455 HSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAV 514
S P P + L RY H +C C+ A+
Sbjct: 351 DPFASQPFPPRQSKEI-------------------------LLERYHSHTKNCAVCQGAL 385
Query: 515 KAFNTWKNSLSTAAALL 531
K N + L+ A A++
Sbjct: 386 KNINRLR-GLTLAIAII 401
>gi|41469408|gb|AAS07231.1| putative iron-sulfur cluster-binding protein [Oryza sativa Japonica
Group]
Length = 527
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 186/459 (40%), Gaps = 67/459 (14%)
Query: 107 PASEEESR----GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL 162
P EE R GE R +DW ++WYP+ D+ P G V ++V + DG GE
Sbjct: 66 PPVAEEVRAPAAGEER---FDWLDQWYPVAPVCDLDPRKPHGKMVLGLRVVAWFDGGGEW 122
Query: 163 RCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSAC 218
R D CPHRLA LSEG++ GRL+C YHGW F+G G C IPQ PA AC
Sbjct: 123 RVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSKAC 182
Query: 219 VRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSIL 273
V +Y ++W + + P D L P+F + P F V + + PY + +L
Sbjct: 183 VASYPSVVQNNILWFY-PRTEPEYRDVLQRKRPPYFPDLDDPSFNTVFGVRDFPYGYDML 241
Query: 274 LENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFE 333
+ENLMDPAH H + +E P+ ++ E GF G RF
Sbjct: 242 VENLMDPAH--NIHLLSTVEFDQERGGPVKMKIEEANIDGFLSIQGENW-----GHFRFI 294
Query: 334 APCVLQNNRESVDNKTGEKHYSTG----------LFLCRPTGQGKSMLIVRFGTTGTSPW 383
APC + NR + +T H+ +FLC P G+S +I F + ++
Sbjct: 295 APCTI--NRSELPLET-LAHFDQEKQQQQPQGMLVFLCIPVAPGRSRVIWVFPQSVSAWP 351
Query: 384 IKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVP--TKELYFNLRSIDTWVAEYRKW 441
K P W H + V + D+ L + V K Y S D + +R W
Sbjct: 352 DKFIPRWLHHMVTNTVLDSDLYLLHIEERNFAAVGVDKWQKACYVPTLS-DNMIITFRNW 410
Query: 442 MDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYF 501
K Y H G + LP T L RY+
Sbjct: 411 FRK-------YCKHQV---------------GWATPMVNQLPT-----TPTKDQLMERYW 443
Query: 502 RHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAG 540
HV+ C C +A+K + +L A+ + G G
Sbjct: 444 SHVMQCTSCSAALKWMRAMEVALQVASVAVVGFLAAGKG 482
>gi|428771008|ref|YP_007162798.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
gi|428685287|gb|AFZ54754.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
Length = 468
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 190/433 (43%), Gaps = 59/433 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQ 180
+D+ E WYP++ D+ D P T+ D+ +V++ D K + R QD CPHRLA LS G+
Sbjct: 28 FDYKEVWYPVFFVNDLHKDKPSRFTLLDEDLVIWWDKKDQQWRVFQDMCPHRLAPLSTGR 87
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWMS 236
+ DG LEC YHGW F G+G C IPQ P K PR ACV++Y + +++V+
Sbjct: 88 IDEDGLLECPYHGWTFSGKGDCQSIPQQPEGENRHKSPR-ACVKSYPSAIAHDMLFVYAG 146
Query: 237 QK----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDY 292
+K P P P EN + + + T ++PYD LLEN++D +H+ +H T
Sbjct: 147 KKENAFLTPMPITQPLIENVEK--WTILKTFRDIPYDALTLLENVLDSSHVSYTHHGT-- 202
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEK 352
R +A P+ EV +GF G W +G L ++ + N D + +
Sbjct: 203 VGNRSNAAPVELEVKTADRQGFTGFWA---EGPRKGKLGSQSTTFIAPNLMWHDLTSKQL 259
Query: 353 HYSTGLFLCRPTGQGK----SMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLS 408
+ + P +GK ++ +F + +IKL P WY H + + + E D FL
Sbjct: 260 GRTMTVVYVTPISKGKCRVFALFPFQFASKIPQFFIKLTPQWYSHLNQNTILEDDQIFLH 319
Query: 409 SQNEVLLK---EKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPA 465
Q L K + + Y +S D +V+E RKW
Sbjct: 320 YQERYLEKLGGSRKFNQAFYLPTKS-DLFVSELRKW------------------------ 354
Query: 466 VVEHAPAGLVAGVSASL-PAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL 524
V +A L P + T + L RY+ H C C A+K T + S
Sbjct: 355 ---------VVNYNAYLFPEQEFPETPNHDQLIERYYSHTEQCSSCSGALKNIKTIRFSA 405
Query: 525 STAAALLTALAIL 537
++ +L L
Sbjct: 406 LIITGIVWSLIPL 418
>gi|56751940|ref|YP_172641.1| cell death suppressor protein Lls1-like protein [Synechococcus
elongatus PCC 6301]
gi|81300973|ref|YP_401181.1| cell death suppressor protein Lls1-like protein [Synechococcus
elongatus PCC 7942]
gi|56686899|dbj|BAD80121.1| cell death suppressor protein Lls1 homolog [Synechococcus elongatus
PCC 6301]
gi|81169854|gb|ABB58194.1| cell death suppressor protein Lls1-like [Synechococcus elongatus
PCC 7942]
Length = 461
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 200/451 (44%), Gaps = 77/451 (17%)
Query: 106 GPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRC 164
GPAS+ +DW E WYP++ +D+ D P T+ + +V++ D E R
Sbjct: 17 GPASDR----------FDWAEVWYPVHYLRDLNRDRPNAFTLLGRDLVIWWDRSAEQWRA 66
Query: 165 HQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQ--LPADAKIPRSACVRT 221
+D CPHR +LSEG+L +GRLEC YHGW F G G C IPQ A AC +T
Sbjct: 67 FEDACPHRQVRLSEGRLDAEGRLECPYHGWAFTGTGDCAVIPQQATTGQAHTSDRACAKT 126
Query: 222 YEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD-----VSTIHELPYDHSILLEN 276
+QG+++V+ TP D++P P D + T +LPYD LLEN
Sbjct: 127 LPTATAQGLLFVYAG--TPERADRVP--LPLVEPWGTDADWVCIDTFRDLPYDALTLLEN 182
Query: 277 LMDPAHIPISHDRTDYSAKREDAQPL-GFEVTERTDRGFAGQW----GREKDGSMPNFLR 331
++DP+H+P +H + R +A P+ ++ E +GF G W R K G+
Sbjct: 183 VLDPSHLPFTHHGS--VGNRANAGPMTDLKIVESDRQGFQGVWPEGPRRGKLGTQST--T 238
Query: 332 FEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLF 387
F AP ++ ++ E+ + G + + P G+ + RF S ++++
Sbjct: 239 FIAPSLMWHDLEA--DSLGR---AMTVVYATPIRAGECRIFARFPFRFKSAIPRFFLRIA 293
Query: 388 PDWYFHQSASKVFEQDMGFLSSQNEVLLKE---KVPTKELYFNLRSIDTWVAEYRKWMDK 444
P W+ H + V E+D FL Q + ++ +++ Y S D +V +W+D+
Sbjct: 294 PTWFQHLGQNTVLEEDQIFLHHQERRIQQQGGSATYSRQCYLPT-SADRFVLALHRWVDR 352
Query: 445 AGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHV 504
G+P+ P P LPA I P L RY H
Sbjct: 353 YA-GVPF---------PNEP-----------------LPASRSI-----PELLERYQSHT 380
Query: 505 IHCKGCRSAVKAFNTWKNSLSTAAALLTALA 535
+HC+ C +A + + AAL LA
Sbjct: 381 LHCRSCAAAWRRSKQGQTVAIAIAALSWTLA 411
>gi|443314552|ref|ZP_21044102.1| Rieske (2Fe-2S) domain-containing protein [Leptolyngbya sp. PCC
6406]
gi|442785849|gb|ELR95639.1| Rieske (2Fe-2S) domain-containing protein [Leptolyngbya sp. PCC
6406]
Length = 474
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 194/428 (45%), Gaps = 54/428 (12%)
Query: 102 KVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE 161
K+ P+ + + G +DW E WYP++ +D+ P T+ Q +V++ + + +
Sbjct: 17 KISTDPSPQALAPGGPDPDKFDWAEAWYPVHYVEDLDPQRPTRFTLLGQDLVIWWEPQAK 76
Query: 162 L-RCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--A 217
R ++CPHRLA LSEG++ + G+LEC YHGW F G G C +IPQ + RS A
Sbjct: 77 AWRVFANQCPHRLAPLSEGRINEAGQLECPYHGWTFSGSGACEQIPQQSPETAAHRSPRA 136
Query: 218 CVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENF-ARP-GFQDVSTIHELPYDHSILLE 275
C + QG+++V+ + +P E A P G+ ++T +LPYD LLE
Sbjct: 137 CAHSLPTAVRQGLLFVYPGRVENAPQVPVPIIEAVEAEPEGWVMLNTFRDLPYDALTLLE 196
Query: 276 NLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFE 333
N++D +HIP +H +T KRE+A P+ V + +GF G W G K RF
Sbjct: 197 NVLDASHIPYTHHKT--VGKRENAAPMEMTVIDPGKQGFQGLWPEGPRKGKLGTQSTRFV 254
Query: 334 APCVLQNNRESVD-NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFP 388
AP ++ ++ S +T Y+T P +G+ L RF +SP +I + P
Sbjct: 255 APGLMYHDLTSKQFGRTLTVVYAT------PIRKGECRLFARFPFKFSSPLPRFFIGVIP 308
Query: 389 DWYFHQSASKVFEQDMGFLSSQNEVLLKE-KVPTKELYFNLRSIDTWVAEYRKWMDKAGH 447
W H + V E D FL Q L + P + + D +V +R+W
Sbjct: 309 RWLSHIGNNGVLEDDQIFLHLQERFLAQAGDQPYAQTCYLPTQADRYVTAFRQW------ 362
Query: 448 GMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHC 507
V+ A AG SLP + L +RY H HC
Sbjct: 363 -------------------VQQFQADPFAG--ESLPPEWSQAA-----LLDRYQSHTQHC 396
Query: 508 KGCRSAVK 515
CR+A++
Sbjct: 397 GSCRTALR 404
>gi|67925326|ref|ZP_00518682.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
gi|67852825|gb|EAM48228.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
Length = 468
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 191/433 (44%), Gaps = 71/433 (16%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQDRCPHRLAKLSEGQ 180
+DW E WYP++ +D+ P T+ ++ IV++ + K + +D+CPHRLA LSEG+
Sbjct: 27 FDWQEVWYPVHYVEDLDKTRPTAFTLLEKNIVIWWEEKNNQWSVFEDQCPHRLAPLSEGR 86
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 237
+ + G LEC YHGW F G+G C IPQ K +S A V+T + QG+++V+ +
Sbjct: 87 INESGCLECPYHGWAFSGQGNCEIIPQQHPTGKAEKSLRASVKTLPTQVRQGLLFVYAGK 146
Query: 238 KTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
+P + + V +T +LPYD L+EN++D +HIP +H ++
Sbjct: 147 PENAEITPIPLVDVLEEDSDEWVCLNTFRDLPYDALTLMENVLDSSHIPYTHHKS--VGN 204
Query: 296 REDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NKTGEK 352
R + P+ EV E GF G W G K F AP ++ ++ S +T
Sbjct: 205 RANVSPVELEVIESGKWGFKGVWEEGPRKGTLGRQETNFVAPAMMYHDLTSKQFGRTLTV 264
Query: 353 HYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGFLS 408
Y+T P G+GK L RF +S +IKL P WY H + V E D FL
Sbjct: 265 VYAT------PIGKGKCRLFARFPFKFSSKIPKFFIKLTPRWYSHIGQNGVLEDDQIFLH 318
Query: 409 SQNEVLLKEK----------VPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTI 458
Q L ++ +PTK F + + W+++Y+ +
Sbjct: 319 HQERYLEQKGGSSKFAKAFYLPTKADLFVFQ-LHIWISQYQAQL---------------- 361
Query: 459 SLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFN 518
P + + + L +RY H HC CR+A+K
Sbjct: 362 -----------------------FPEQSLSPALSSETLLDRYHSHTKHCSSCRTALKNLQ 398
Query: 519 TWKNSLSTAAALL 531
K ++ A +++
Sbjct: 399 RLKIGVAIATSII 411
>gi|384251579|gb|EIE25056.1| hypothetical protein COCSUDRAFT_46572 [Coccomyxa subellipsoidea
C-169]
Length = 548
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 143/473 (30%), Positives = 211/473 (44%), Gaps = 82/473 (17%)
Query: 108 ASEEESRGERRVAD--YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCH 165
+++ + ER V YDW ++WYPL +D+ P + + +++VL++D + RC
Sbjct: 67 SAKHSTEVEREVEQETYDWAKQWYPLAFVEDLDPKVPHPVELLGERLVLWRDADKQWRCF 126
Query: 166 QDRCPHRLAKLSEGQL--IDGRLECLYHGWQFEGEGKCVKIPQLPADAKI-------PRS 216
QD+CPHRLA LSEG++ DG L C YHGW+F+GEGKC IPQ DAK PRS
Sbjct: 127 QDKCPHRLAPLSEGRIEPSDGTLMCSYHGWRFDGEGKCTDIPQ-SLDAKANAAACSNPRS 185
Query: 217 ACVRTYEVKESQGVVWVW-------MSQKTPPNPDKLPWFENFARP----GFQDV----- 260
C ++ + QG VWV+ P L E+ P G +D
Sbjct: 186 -CAISHPTQVLQGKVWVFGEGGSRAFIDSAAVKPALLEDLEDTYPPREKNGGEDCFFAGG 244
Query: 261 STIHELPYDHSILLENLMDPAHIPISH-----DRT-DYSAKREDAQPLGFEVTERTDRGF 314
+LPY S L+ENL DP+H+ SH DRT D + K +P + +
Sbjct: 245 HYARDLPYAWSTLMENLADPSHVNFSHHNVVGDRTVDQTMKIVSKEPSKTVPSIKDTFKM 304
Query: 315 AGQWGREKDGSMPNF-LRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKS-MLI 372
A +K F + F APC+++ G KH +++ PTG G+S +L
Sbjct: 305 AVTSFDDKARDYQTFDMEFVAPCLVKWGIPPWG--VGIKHGYMPMYMI-PTGPGRSKILW 361
Query: 373 VRFGTTGTSP-----WIKLFPDWYFHQSAS-KVFEQDMGFLSSQNEVLLKE-KVPTKELY 425
T + P +L P W H S + +V + D G L Q + KE + LY
Sbjct: 362 CMLLPTSSMPAPAKLMQRLTPKWLQHISITPQVLDGDTGLLHGQEVAVSKEAEKDLNRLY 421
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
+ D +VA YRKW+ G G P + +P+ ++ L A+
Sbjct: 422 YMPAQADRFVAAYRKWLAGRGGGGP-------LPMPE----------------TSELQAQ 458
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILG 538
P L +RY +H +C C AV+ F +L A L A+ +G
Sbjct: 459 --------PQLLDRYSQHTQNCPSCSRAVQVF----TALRIVTAALAAVCAMG 499
>gi|254412665|ref|ZP_05026438.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196180400|gb|EDX75391.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 443
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 184/412 (44%), Gaps = 54/412 (13%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQDRCPHRLAKLSE 178
+++++ ++WYPL +D+ P +TV ++V++K R D+CPHRLA LSE
Sbjct: 3 SEFNFFQQWYPLSPVEDLDPKQPTPVTVLGLRLVIWKPPSSPTYRVFLDQCPHRLAPLSE 62
Query: 179 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPR---SACVRTYEVKESQGVVWV 233
G++ + G L C YHGWQF +G C IPQ + + CV+T + ++WV
Sbjct: 63 GRVDEKTGNLVCSYHGWQFNSQGICTHIPQAETPQIVTNNQDNICVQTLPCCQENDLLWV 122
Query: 234 WMSQKTP------PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
W+ +P P P P + A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 123 WLDANSPELAAATPRPLS-PQVD--ASKGFVWSSMVRDLDYDWQTLVENIADPSHVPFAH 179
Query: 288 DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDN 347
R+ AQP+ E+ + T G G + FE PC L+
Sbjct: 180 H--GVQGNRDQAQPIAIEIVQSTANRIEG----NTVGRFNTKMTFEPPCHLE-----YAI 228
Query: 348 KTGEKHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASK-VFEQDMG 405
G+K GL C P GKS ++ +F +L P W+ H + V + DM
Sbjct: 229 SFGDKGQQVGLVTYCIPVAPGKSRIVAQFPRNFAKSLSRLTPRWWNHITVRNLVLDGDMI 288
Query: 406 FLSSQNEVLLKEKVPT--KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
L Q L + + K Y L S D +V E+RKW DK G +LP
Sbjct: 289 LLHQQERFLQQRQSVESWKTAYKLLTSADRFVIEFRKWFDKYCQG----------TLP-- 336
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVK 515
GL + + S+ + + +RY +H HC+ C +A+K
Sbjct: 337 -----WKQVGLNSSDTISI-------NDNRQEVLDRYRQHTQHCRSCSAALK 376
>gi|428211927|ref|YP_007085071.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
gi|428000308|gb|AFY81151.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
Length = 469
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 193/435 (44%), Gaps = 63/435 (14%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQ 180
+D E WYP+Y +D+ + T+ + ++ D G+ R +D+CPHRLA LSEG+
Sbjct: 27 FDVREVWYPVYYLQDLDKSKIMRFTLLGVDLAIWWDKTGQSWRAFEDKCPHRLAPLSEGR 86
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 237
+ + G +EC YHGW F GKC IPQ K +S ACVR + E QG+++V+
Sbjct: 87 INEQGWIECPYHGWAFSATGKCETIPQQNEGGKAEQSERACVRNFPTAEHQGLLFVYAGN 146
Query: 238 KTPPNPDKLPWFENFARP--GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
K+P + + ++T +LPYD LLEN++D +HIP +H RT
Sbjct: 147 PENAKQTKVPLIDPLEESPDKWVCLNTFRDLPYDALTLLENVLDASHIPYTHHRT--VGN 204
Query: 296 REDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NKTGEK 352
R +A + EV +GF G W G K F AP ++ ++ S +T
Sbjct: 205 RANASKVDLEVIAAGKQGFEGLWEEGPRKGTLGSQQTHFIAPGLMWHDLTSKQFGRTMTV 264
Query: 353 HYSTGLFLCRPTGQGKSMLIVR----FGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLS 408
Y+T P +G+ L R F + + +IKL P WY H + + E D FL
Sbjct: 265 VYAT------PIRKGECRLFARFPFQFASKVPATFIKLTPQWYSHIGQNAILEDDQIFLY 318
Query: 409 SQNEVLL----KEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVP 464
Q L EK+ K Y ++ D +V +RKW+++ + + G S L
Sbjct: 319 HQERYLEAAGGSEKI-AKAFYLPTKA-DLFVLAFRKWVNE--YDADPFPGESFPPLRSRE 374
Query: 465 AVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL 524
A L +RY H IHC+ C +A++ L
Sbjct: 375 A------------------------------LLDRYHSHTIHCRSCSTALRRI----QKL 400
Query: 525 STAAALLTALAILGA 539
A +L A+A + A
Sbjct: 401 REMAGILAAIAWITA 415
>gi|119510320|ref|ZP_01629456.1| hypothetical protein N9414_16222 [Nodularia spumigena CCY9414]
gi|119465064|gb|EAW45965.1| hypothetical protein N9414_16222 [Nodularia spumigena CCY9414]
Length = 445
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 197/435 (45%), Gaps = 54/435 (12%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSE 178
+++++ ++WYPL +D+ P +T+ ++V++K E + D+CPHRLA LSE
Sbjct: 3 SEFNFFQQWYPLSPVEDIDPTRPTPVTLLGIRLVIWKPKSSETYQVFLDQCPHRLAPLSE 62
Query: 179 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 233
G++ + G L C YHGWQF+ +G C IPQ + ++ CV + V+++ ++WV
Sbjct: 63 GRVDEKSGNLMCSYHGWQFDSQGICTHIPQAEKPEIVTKNEKIFCVISLPVRQANDLLWV 122
Query: 234 WMSQKTPPNPDKLPW---FENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
W + P + A G+ S + +L YD L+EN+ DP+H+P +H
Sbjct: 123 WPDANSAEAAANTPLPLSPQVDADKGYVWSSYVRDLEYDWETLVENVADPSHVPFTHHGV 182
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQ---NNRESVDN 347
KRE A P+ EV + T + G + FE PC L+ N +S +
Sbjct: 183 --QGKREYATPIPMEVVQSTSKLIEAM----TSGRFKTTITFEPPCRLEYAINLGDSGEK 236
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMGF 406
K G Y C P GKS ++ +F +L P W+ H + + V + DM
Sbjct: 237 KVGLVTY------CIPVSPGKSRIVAQFPRNFAKTLHRLTPRWWSHINTRNLVLDGDMIV 290
Query: 407 LSSQNEVLLKEKVPT--KELYFNLRSIDTWVAEYRKWMDKAGHG-MPYYFGHSTISLPKV 463
L Q L + + K +Y S D V E+R W DK G +P+ I++P
Sbjct: 291 LHQQENFLQQRQAVESWKTIYKLPTSADRLVIEFRNWFDKYCFGQLPW--SEVGITVPPS 348
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNS 523
P + ++ L +RY +H HC CR+A+K +
Sbjct: 349 PQINDNRSV-----------------------LLDRYSQHTQHCSSCRNALKVIQRLQVG 385
Query: 524 LST-AAALLTALAIL 537
L + +++ +A+L
Sbjct: 386 LLIYSTSIIAGVALL 400
>gi|428304442|ref|YP_007141267.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428245977|gb|AFZ11757.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 441
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 208/469 (44%), Gaps = 89/469 (18%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQ 180
+++ + WYP+ +D+ P +T+ +++V++K E R D+CPHRLA LSEG+
Sbjct: 6 FNFFQHWYPIAPLEDLDPKRPTPVTILGRRLVVWKPTVSEQYRVFLDQCPHRLAPLSEGR 65
Query: 181 --LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVWM 235
L G L C YHGWQF EG+C IPQ I ++ CV T +++ G++WVW+
Sbjct: 66 VDLETGNLMCSYHGWQFNPEGECTHIPQAENPDLIAKNKDNFCVVTLPIQQINGLLWVWL 125
Query: 236 SQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDY 292
+K+ LP + A GF S + +L YD L+EN+ DP+H+P SH
Sbjct: 126 DEKSADLAASTPLPLSPSIDASKGFVWSSMVRDLEYDWQTLVENVADPSHVPFSHHGV-- 183
Query: 293 SAKREDAQPLGFEVTERT--------DRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRES 344
R+ A+P+ E+ + T RGFA + + FE PC L+ E
Sbjct: 184 QGNRKQAKPIAMEIAQSTPDLIEATLSRGFATR------------ITFEPPCRLEYAMEF 231
Query: 345 VDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQD 403
G K + ++ C P GKS ++ +F + P W+ H Q+ + V + D
Sbjct: 232 ----PGGKKFGLVVY-CVPVSPGKSRIVGQFPRNFAKTLHHVIPRWWDHIQNRNLVLDGD 286
Query: 404 MGFLSSQNEVLLKEKVPT---KELYFNLRSIDTWVAEYRKWMDKAGHG-MPYYFGHSTIS 459
M L Q E L+E T K Y S D V E+R+W DK G +P+ + +
Sbjct: 287 MVLLHYQ-EHRLQEYESTQSWKTAYKMPTSADLLVIEFRRWFDKYCQGKLPW--EQTVVK 343
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGC--------R 511
P+ P V L +RY +H + C+ C R
Sbjct: 344 SPEQPLVNREV-------------------------LLDRYKQHTMICESCSGALKNVQR 378
Query: 512 SAVKAFNTWKNSLSTAAAL-----------LTALAILG-AGRQWRAFCL 548
S V + S++T AA+ L ALA++G G W F L
Sbjct: 379 SQVALIGYFAVSVATVAAMPDNLRVSLGLPLIALALIGLGGYAWLKFWL 427
>gi|357518871|ref|XP_003629724.1| Pheophorbide a oxygenase [Medicago truncatula]
gi|355523746|gb|AET04200.1| Pheophorbide a oxygenase [Medicago truncatula]
Length = 546
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 192/475 (40%), Gaps = 87/475 (18%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDR 168
++E E +DW +WYPL D+ AP V +V++ D + + D
Sbjct: 43 DDEPEVETGSEKFDWYSQWYPLMPICDLDKRAPHAKKVMGIDVVIWWDRNESAWQVFDDA 102
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEV 224
CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P + + ACV Y
Sbjct: 103 CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACVAAYPS 162
Query: 225 KESQGVVWVW----------MSQKTPP------NPDKLPWFENFARP-----GFQDVSTI 263
++W W +++KTPP +P + N P F++++
Sbjct: 163 TVQNDILWFWPNTDPQYKDIITRKTPPFIPEIDDPSFTSFMGNRDIPYGYDFNFENITLC 222
Query: 264 HEL--PYDHSILLENLMDPAHIPISH------DRTDYSAKREDAQPLGFEVTERTDRGFA 315
L Y + +L+ENLMDP+H+P +H + A RE +PL + E GF
Sbjct: 223 IPLTVTYMYEVLVENLMDPSHVPYAHYGLMKTPQPKVKADREGGRPLELSIEELDVNGFT 282
Query: 316 GQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRF 375
G K MP + + +++ K+ + +F C P G S LI F
Sbjct: 283 ENQGWSKSKFMPPSIFYAYTDLIKPVSSEETKKSSVQKKFALIFFCIPVSPGNSRLIWCF 342
Query: 376 GTTGTSPWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEK---------VPTKELY 425
WI K+ P W FH + + + D+ L + + +L VPTK
Sbjct: 343 -PRNFGLWIDKIVPRWIFHIGQNLIIDSDLYLLHVEEKKILDVGQANWHKACFVPTKA-- 399
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
D V +RKW+ K + G +LP P+
Sbjct: 400 ------DALVIGFRKWLKKYAGDQVEWRGKYNGALPPTPS-------------------- 433
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAG 540
L +RY+ HV++CK C A K SLS +L +++ G
Sbjct: 434 -------REQLMDRYWSHVVNCKSCNLAYK-------SLSVVEVMLQIISVASIG 474
>gi|434402833|ref|YP_007145718.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257088|gb|AFZ23038.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 443
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 206/463 (44%), Gaps = 64/463 (13%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSE 178
A++++ + WYPL +D+ P+ +T+ ++V++K E R D+CPHRLA LSE
Sbjct: 3 AEFNFFQHWYPLSPIEDIAPQRPVPVTLLGIRLVIWKSKLSENYRVFLDQCPHRLAPLSE 62
Query: 179 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWV 233
G++ D G L C YHGWQF+ +G C IPQ AK R+ CV + V++ ++WV
Sbjct: 63 GRVDDKTGNLMCSYHGWQFDEQGICTHIPQAENPELVAKNQRNFCVVSLPVRQENDLLWV 122
Query: 234 WMSQKTPPNPDKLPWFENFARP---------GFQDVSTIHELPYDHSILLENLMDPAHIP 284
W P+ D N P GF S + +L YD L+EN+ DP+H+P
Sbjct: 123 W------PDADSTELAANTPLPLSPQIDVKKGFVWSSYVRDLEYDWQTLVENVADPSHVP 176
Query: 285 ISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRES 344
+H RE A P+ + + T+ G + FE PC L+ S
Sbjct: 177 FAHHGV--QGNRETATPIALNIIKSTENLIEA----STAGRFQTTITFEPPCRLE-YAIS 229
Query: 345 VDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQD 403
V N + T C P GK ++ +F + P W+ H ++ ++V + D
Sbjct: 230 VPNSDKQLGLVT---YCIPVSPGKCRIVAQFPRNFAKTLHRFIPRWWNHIKTRNQVLDGD 286
Query: 404 MGFLSSQNEVLLKEKVPT---KELYFNLRSIDTWVAEYRKWMDKAGHG-MPYYFGHSTIS 459
M L Q E LL++K + K Y S D V E+R W DK G +P++
Sbjct: 287 M-ILLHQQEYLLQQKQLSESWKTAYKLPTSADRLVIEFRNWFDKYCQGKLPWH------- 338
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT 519
G++A P + I A L + Y +H HC CR+A+K
Sbjct: 339 -----------QVGIIA------PERWQINDNRAVIL-DCYKQHTQHCSSCRNALKNLQH 380
Query: 520 WKNSLSTAAAL-LTALAIL-GAGRQWRAFCLVSASLCLAGVYA 560
+ +L + ++ +AIL A R LV +L G Y+
Sbjct: 381 LQIALLAYFVITISGVAILPDALRMRLGLPLVITALLGLGAYS 423
>gi|427707380|ref|YP_007049757.1| Pheophorbide a oxygenase [Nostoc sp. PCC 7107]
gi|427359885|gb|AFY42607.1| Pheophorbide a oxygenase [Nostoc sp. PCC 7107]
Length = 465
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 189/432 (43%), Gaps = 57/432 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSEGQ 180
+DW E WYP++ D+ T+ ++ +VL+ D + R +D+CPHRLA LSEG+
Sbjct: 27 FDWLEVWYPVHYVADLNKSQLTRFTLLERDLVLWWDKNEQTWRAFEDQCPHRLAPLSEGR 86
Query: 181 L-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 237
+ DG LEC YHGW F G GKC IPQ K S ACV + QG+++V+ +
Sbjct: 87 VNKDGWLECPYHGWAFSGTGKCESIPQQAPGGKAETSPRACVNSLPTTVRQGLLFVYPGK 146
Query: 238 KTPPNPDKLPWFENFAR--PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
+P + G+ ++T +LPYD L+EN++D +HIP +H RT
Sbjct: 147 AENAAKTLVPIVDVLEENTEGWVCLNTFRDLPYDALTLMENVLDSSHIPYTHHRT--VGN 204
Query: 296 REDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NKTGEK 352
R + P+ E+ E GF G W G K F AP ++ ++ S +T
Sbjct: 205 RANVAPVELEIVELGKWGFKGLWQEGPRKGTLGKQDTTFIAPGLMWHDLTSKQFGRTLTV 264
Query: 353 HYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGFLS 408
Y+T P +G+ L RF +S ++KL P WY H + V E D FL
Sbjct: 265 VYAT------PIRKGECRLFARFPFKFSSNLPGLFLKLTPRWYSHLGQNGVLEDDQIFLH 318
Query: 409 SQNEVLLKEKVP---TKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPA 465
Q L ++ TK Y ++ D +V + R W+ +
Sbjct: 319 HQERYLEQKGGTDNFTKAFYLPTKA-DIFVFQLRSWVKQY-------------------- 357
Query: 466 VVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLS 525
+ S P + + L +RY H HC CR+A+K + +
Sbjct: 358 ------------CAESFPGETLPPPLPKEALLDRYHSHTKHCSSCRTALKNLQRLRLGVV 405
Query: 526 TAAALLTALAIL 537
A AL+ +L L
Sbjct: 406 VATALIWSLLSL 417
>gi|443326458|ref|ZP_21055111.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442793912|gb|ELS03346.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 435
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 188/432 (43%), Gaps = 59/432 (13%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLS 177
++ +++ + WYPL +D+ PL T+ +V++K + + DRCPHRLA LS
Sbjct: 1 MSSFNFFQHWYPLVPIEDINPQKPLPATLLGIPLVIWKPSSSQTYQVFLDRCPHRLAPLS 60
Query: 178 EGQLID--GRLECLYHGWQFEGEGKCVKIPQLPAD-----AKIPRSACVRTYEVKESQGV 230
EG++ D L C YHGWQFE +G C +IPQ AD AK ++ C + ++ +
Sbjct: 61 EGRIDDKTDNLMCSYHGWQFETKGNCTRIPQ--ADNPELIAKKSQNFCATVFPCRQENDL 118
Query: 231 VWVWMSQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+WVWM +P LP A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 119 LWVWMDASSPEIAAITALPLSPQIDASKGFVWSSMVRDLEYDWQTLVENVADPSHVPFAH 178
Query: 288 DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDN 347
R+ A P+ ++ R + D + FE PC L+
Sbjct: 179 H--GIQGNRDRAHPIPLDII----RSEIDLIEAKVDKPFKTTITFEPPCRLEYAL----- 227
Query: 348 KTGEKHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMG 405
G++ GL C P GKS ++ +F + KL P W+ H Q+ + + + DM
Sbjct: 228 TFGDEIKKIGLITYCIPVSPGKSRIVAQFSRNFATKLHKLTPRWWDHIQNRNLILDGDMV 287
Query: 406 FLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPA 465
L Q L + K Y S D V E+R W D+ + K+P
Sbjct: 288 LLHQQESFL--QHTNWKTAYKMPTSADRLVIEFRSWFDRYCNA-------------KLPW 332
Query: 466 VVEHAPAGLVAGVSASLPAKGGIGTMHAPN--LANRYFRHVIHCKGCRSAVKAFNTWKNS 523
VE P T+ P L +RY +H HC CR+ ++ W+
Sbjct: 333 AVESQPR----------------PTLDKPREILLDRYHQHTQHCSSCRNILRTIQLWQWI 376
Query: 524 LSTAAALLTALA 535
L ++T++
Sbjct: 377 LVIYFIVVTSIV 388
>gi|307153246|ref|YP_003888630.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7822]
gi|306983474|gb|ADN15355.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7822]
Length = 482
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 186/423 (43%), Gaps = 59/423 (13%)
Query: 109 SEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQD 167
++E S G +D E WYP++ KD+ P T+ D+++V++ D + R D
Sbjct: 32 TDELSAGGLDPTRFDPQEAWYPIHYVKDLDKTKPTSFTLLDRKLVIWWDKNADQWRVFDD 91
Query: 168 RCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEV 224
+CPHRLA LSEG++ + G +EC YHGW F G GKC IPQ P K S ACV + V
Sbjct: 92 QCPHRLALLSEGRINEEGLIECPYHGWTFSGSGKCEFIPQQPQGTKAEDSKRACVNSLPV 151
Query: 225 KESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD-------VSTIHELPYDHSILLENL 277
QG+++ + P NP+ P +D + T +LPYD +LEN+
Sbjct: 152 SVCQGLLFTY-----PGNPENAPKVRVPIIEPLEDNSGEWVCIDTFRDLPYDALTVLENV 206
Query: 278 MDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV 337
+D +H+P +H T R++A P+ E+ + GF G W ++G L +
Sbjct: 207 LDSSHVPYTHHGT--VGNRQNAAPVELEIVKSGREGFIGAW---EEGPRKGTLGRQDTIF 261
Query: 338 LQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFH 393
+ N D + + + + P +GK L RF + +I L P WY H
Sbjct: 262 IAPNFMYHDLTSKQFGRTLTVVYATPISKGKCRLFARFPFKFAAKLPGLFINLTPRWYSH 321
Query: 394 QSASKVFEQDMGFLSSQNEVLLKEKVPTK--ELYFNLRSIDTWVAEYRKWMDKAGHGMPY 451
+ + + E D FL Q L + K + ++ DT+V+ R+W+++ P
Sbjct: 322 TNQNTILEDDQIFLHYQERFLEQAGGSQKFNKAFYLPTKADTYVSALRQWVNQY-QAEP- 379
Query: 452 YFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCR 511
F T++ P + L +RY H ++C C
Sbjct: 380 -FKEQTLAPP-----------------------------LSKEELLDRYHSHTVNCASCS 409
Query: 512 SAV 514
+A+
Sbjct: 410 AAL 412
>gi|113477750|ref|YP_723811.1| pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
gi|110168798|gb|ABG53338.1| Pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
Length = 465
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 198/432 (45%), Gaps = 65/432 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQDRCPHRLAKLSEGQ 180
+DW E WYP+Y +D+ + P T+ +Q +V++ + K + R +D+CPHRLA LS+G+
Sbjct: 24 FDWQEVWYPIYYIEDLEKNKPTTFTLLEQDLVIWWEEKNNQWRVFEDQCPHRLAPLSQGR 83
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 237
+ + G LEC YHGW F G G C IPQ A K +S A V++ K QG+++V+ +
Sbjct: 84 INEAGCLECPYHGWAFSGGGNCEIIPQQIAGGKAEKSSRAKVKSLPTKVCQGLLFVYAGK 143
Query: 238 -----KTP-PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
+TP P D L N + ++T ++PYD L+EN++D +HIP +H RT
Sbjct: 144 IENAAQTPIPKVDVLDENSN----EWICLNTFRDVPYDGLTLMENVLDASHIPYTHHRT- 198
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NK 348
R + P+ EV E GF G W G K F AP ++ ++ S +
Sbjct: 199 -VGNRANVAPVELEVLESGKWGFKGVWEEGPRKGTLGRQETTFIAPGMMWHDLTSKQFGR 257
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDM 404
T Y+T P +G+ L RF +SP +I+L P WY H + V E D
Sbjct: 258 TLTVVYAT------PIRKGECRLFARFPFKFSSPLPKFFIQLSPRWYSHIGQNGVLEDDQ 311
Query: 405 GFLSSQNEVLLKEKVP---TKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLP 461
FL Q L + +K Y ++ D +V E R W++K + F ++T+S
Sbjct: 312 IFLHYQERYLEAKGGSANFSKAFYLPTKA-DLFVFELRSWVNKYNAQL---FPNATLS-- 365
Query: 462 KVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWK 521
+++ L +RY H C CR A+K K
Sbjct: 366 ---------------------------SALNSEILLDRYHSHTKKCSSCRRALKNLQRIK 398
Query: 522 NSLSTAAALLTA 533
+ + + A
Sbjct: 399 VGVVLVTSFIWA 410
>gi|78213302|ref|YP_382081.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9605]
gi|78197761|gb|ABB35526.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9605]
Length = 456
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 202/478 (42%), Gaps = 81/478 (16%)
Query: 98 PDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD 157
P DH L PA WTE+W+P+ +D+ P T+ ++ +V++ D
Sbjct: 12 PSDHGDLDAPAMHPT-----------WTEQWWPISYVQDLDPKTPSRFTLLERDLVIWWD 60
Query: 158 -GKGELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP- 214
R D CPHRL LSEG++ + G LEC YHGW F+G+G+C ++PQ + +
Sbjct: 61 RAASSWRVFPDVCPHRLVPLSEGRINEEGLLECPYHGWSFDGDGQCQRVPQALENTQPNN 120
Query: 215 -RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD-------VSTIHEL 266
RS C + QG+++VWM +P +LP P +D T +L
Sbjct: 121 RRSRCA-SLPTATRQGLLFVWMGAPDAADPSQLPLV-----PALEDNPDSWTVQDTFRDL 174
Query: 267 PYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDG 324
P D LLEN++D +H+P +H +T KRE+A P+ +T GF W G +
Sbjct: 175 PMDAVTLLENVLDVSHVPFTHHKT--VGKRENAAPVEASITGEDASGFTAYWEEGPRRGK 232
Query: 325 SMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP-- 382
F AP ++ ++ + G T ++ P +G+ L RF S
Sbjct: 233 LGAQSTTFHAPQLMWHDLTA----KGFGRILTVVYAV-PIRRGECRLFARFPFQFQSAVP 287
Query: 383 --WIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKE--KVPTKELYFNLRSIDTWVAEY 438
I L P W H KV E D FL Q VL + + +F + D +VA
Sbjct: 288 RLLIGLRPRWLQHIGNHKVLEDDQVFLHWQERVLERAGGSPAVERSFFMPTTSDVYVAAL 347
Query: 439 RKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLAN 498
+W++ G G P+ LP + L +
Sbjct: 348 HRWLNGNG-GEPF--------------------------AGQPLPPRQSTTA-----LMD 375
Query: 499 RYFRHVIHCKGCRSAVKAFNT---WKNSLSTAAALLTALAILGAGRQWRAFCLVSASL 553
RY H IHC+ C SA+K T W +L +A AL + G W + LV+A+L
Sbjct: 376 RYNSHTIHCRSCSSALKRIRTARPWAWALLWGSA---ALLGIQQGSAWNSTGLVTAAL 430
>gi|116070900|ref|ZP_01468169.1| cell death suppressor protein Lls1-like [Synechococcus sp. BL107]
gi|116066305|gb|EAU72062.1| cell death suppressor protein Lls1-like [Synechococcus sp. BL107]
Length = 438
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 195/454 (42%), Gaps = 70/454 (15%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE---LRCHQDRCPHRLAKLSEGQ 180
WTE+W+P+ +D+ P T+ ++ +V++ D K E R D CPHRL LSEG+
Sbjct: 5 WTEQWWPIAYLQDLDRSQPNRFTLLERDLVIWWDAKAEQASWRVFPDVCPHRLVPLSEGR 64
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAK--IPRSACVRTYEVKESQGVVWVWMSQ 237
+ D G LEC YHGW F+GEG C IPQ P + K RS C + QG+++VW +
Sbjct: 65 INDEGLLECPYHGWSFDGEGHCRSIPQAPDNTKPEARRSRC-SSLPTAIGQGLLFVWTGE 123
Query: 238 KTPPNPDKLPWF----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS 293
N LP E+ QD T +LP D LLEN++D +H+P +H +T
Sbjct: 124 PDAANQHPLPLVPALEEDPKSWTLQD--TFRDLPMDAVTLLENVLDVSHVPFTHHKT--V 179
Query: 294 AKREDAQPLGFEVTERTDRGFAGQWG----REKDGSMPNFLRFEAPCVLQNNRESVDNKT 349
R +A P+ +T + GF W R K GS F AP ++ ++ +
Sbjct: 180 GNRNNASPVLATITREAEDGFDAFWEEGPRRGKLGSQTT--SFHAPQLMWHDLTA----K 233
Query: 350 GEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMG 405
G T ++ P +G+ L RF S I L P W H KV E D
Sbjct: 234 GFARILTVVYAV-PIRRGECRLFARFPFQFQSAVPKLLIGLRPRWLQHIGNHKVLEDDQV 292
Query: 406 FLSSQNEVLLKE--KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
FL Q VL + +F + D +VA +W++ G G P+
Sbjct: 293 FLHWQERVLERAGGSPAADRAFFMPNTADVYVAALHRWLNNNG-GEPF------------ 339
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSA---VKAFNTW 520
LP + +L +RY+ H C+ C +A ++A W
Sbjct: 340 --------------AGKDLPER-----QRTADLMDRYYSHTQSCRSCSTALRRIRAARPW 380
Query: 521 KNSLSTAAALLTALAILGAGRQWRAFCLVSASLC 554
+ AA AL LG G W A +V A+L
Sbjct: 381 AWVVLWGAA---ALVGLGQGGVWSAIGVVIAALA 411
>gi|41469410|gb|AAS07233.1| putative iron-sulfur cluster-binding protein [Oryza sativa Japonica
Group]
Length = 552
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 202/508 (39%), Gaps = 72/508 (14%)
Query: 91 SSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQ 150
S+ A TP H + G ++W ++WYP+ D+ P G V
Sbjct: 54 SAVAAETPPPHARAEEEEEAAPAVGGGEEGRFEWLDQWYPVAPVCDLDPRKPHGKMVMGL 113
Query: 151 QIVLYKDGKG--ELRCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQL 207
++V + DG G E R D CPHRLA LSEG++ GRL+C YHGW F+G G C IPQ
Sbjct: 114 RVVAWFDGGGGGEWRVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQA 173
Query: 208 PA---DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQD 259
PA ACV +Y ++W + + P + L P+F + P F
Sbjct: 174 PALGPPVHKNSKACVASYPSVVQNNILWFY-PRSEPEYKEILQRKRPPYFPDLDDPSFNT 232
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDA----------------QPLG 303
V + +L Y + +L+ENLMDPAH+P +H +ED Q G
Sbjct: 233 VFGVRDLFYGYDVLVENLMDPAHVPYAHKGLMPIQNKEDPGRYCSTVHLLSTVESDQEGG 292
Query: 304 FEVTERTDRG-FAGQWGREKDGSMPNFLRFEAPCVL-----QNNRESVDNKTGEKH-YST 356
+ V RT++ G ++D +++F+APC L + V K +K +
Sbjct: 293 YPVKIRTEQAKIDGFLSVQEDDVC--YMKFDAPCTLYGKPFRTKEPQVSEKKKKKQPEAM 350
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLK 416
+FLC P G+S LI F + + P W +H + V + D L +
Sbjct: 351 TVFLCVPVAPGRSRLIWAFPRNVDAWLDNIIPRWLYHIVTNIVLDSDSYLLHIEERNFAT 410
Query: 417 EKVPT--KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGL 474
+ K Y S D V +R W K Y H G
Sbjct: 411 VGLDNWHKACYVPTSS-DNMVITFRNWFRK-------YCKHQI---------------GW 447
Query: 475 VAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTAL 534
++ LP T + RY HV+ C C +A+K + +L A+ +
Sbjct: 448 ATPMANQLPP-----TPTKDQVLERYRSHVMQCTSCSAALKKMKALEVALQVASVAIVGF 502
Query: 535 AILGAGRQW-----RAFCLVSASLCLAG 557
+ G RA + +A LC A
Sbjct: 503 LAVAKGSLAPSVVRRAAAVSTAVLCFAA 530
>gi|17229589|ref|NP_486137.1| cell death suppressor protein [Nostoc sp. PCC 7120]
gi|17131188|dbj|BAB73796.1| cell death suppressor protein [Nostoc sp. PCC 7120]
Length = 499
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 205/473 (43%), Gaps = 79/473 (16%)
Query: 104 LVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELR 163
L+ A+EE+S E + + WT++WYP+ + + + P + + + IVL++DG + R
Sbjct: 16 LLDNATEEQSSKEENI--FQWTKQWYPVAVVEFLDPSRPHAMQLLGKDIVLWRDGSSQWR 73
Query: 164 CHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----A 217
C +D CPHRLA LSEG++ DG L C YH W+F+ EG CV IPQ + ++ +
Sbjct: 74 CFEDFCPHRLAPLSEGRVEADGTLLCAYHAWRFDAEGNCVSIPQSKDEQTAAKNCESQKS 133
Query: 218 CVRTYEVKESQGVVWVWMS-------QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDH 270
C Y +E QG++WVW + P +P E+ + + +LPY
Sbjct: 134 CAVVYPTQERQGLLWVWAEAGEQAKVESQLQTPRIVPELEDNSGKVIKSPWNFRDLPYGW 193
Query: 271 SILLENLMDPAHIPISH-----DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGS 325
+EN+ DPAH+P+SH DR AK D P+ T+ GFA + + +
Sbjct: 194 DYFMENVSDPAHVPVSHHGIIGDRYQ-DAKFYDMIPIRHISTQD---GFAFEIQPTQGNT 249
Query: 326 MPNFLRFEAPCVLQNNRESVDNKTGE---------------KHYSTGLFLCRPTGQGKSM 370
+ F+ PC ++ S D G+ +H +F+ P G+ K
Sbjct: 250 VQAIHDFQPPCYMRIASTSEDG--GQLILALYATPTRPGWCRHIGCQVFVKNPQGK-KPQ 306
Query: 371 LIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT-KELYFNLR 429
+ FG P W H AS QDM FL Q +++ + + +
Sbjct: 307 GLSFFGLP--------LPVWLVHVLASLFLHQDMVFLHYQEKIIAQRRNGKWLNAVYTPN 358
Query: 430 SIDTWVAEYRKWMD-KAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGI 488
D V R+W + +AG G+P+ G+S+ +P PA+
Sbjct: 359 PQDKMVITLRQWWENRAGGGIPWAEGYSS----DIP------------------PAEKD- 395
Query: 489 GTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR 541
L + + H HC C+ A+K N +AA+ LA++ R
Sbjct: 396 ----KQKLFDVWTTHTQHCTVCQDALKNINRLTVLAYISAAVCLFLAVILDAR 444
>gi|30686966|ref|NP_849444.1| ACD1-like protein [Arabidopsis thaliana]
gi|75248733|sp|Q8W496.1|PTC52_ARATH RecName: Full=Protochlorophyllide-dependent translocon component
52, chloroplastic; AltName: Full=ACD1-like protein;
AltName: Full=Protein TIC 55-IV; AltName:
Full=Translocon at the inner envelope membrane of
chloroplasts 55-IV; Flags: Precursor
gi|17065310|gb|AAL32809.1| Unknown protein [Arabidopsis thaliana]
gi|27311961|gb|AAO00946.1| Unknown protein [Arabidopsis thaliana]
gi|332659689|gb|AEE85089.1| ACD1-like protein [Arabidopsis thaliana]
Length = 559
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 203/509 (39%), Gaps = 99/509 (19%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDR 168
E E+ E +DW WYP+ D+ P G V +V++ D + + + D
Sbjct: 67 EPEALFEPGSDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDT 126
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEV 224
CPHRLA LS+G++ GRL+C+YHGW F G G C IPQ P D + ACV Y
Sbjct: 127 CPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPS 186
Query: 225 KESQGVVWVWMSQ----KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 280
++W W + K +K P+ P F + ++PY + +L+ENLMDP
Sbjct: 187 TVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDP 246
Query: 281 AHIPISH--------DRTDY---------------------SAKREDAQPLGFEVTERTD 311
AH+P +H + Y RE +PL V + +
Sbjct: 247 AHVPYAHYGLMRFPKPKGKYIICISNSCFNPFTNLQILLAEKIDREGGKPLEINVKKLDN 306
Query: 312 RGFAG--QWGREKDGSMPNFLRFEAPCVLQNNRESV-------------DNKTGEKHYST 356
+GF +WG + F APCV +++ + + D K +
Sbjct: 307 KGFFSKQEWG---------YSNFIAPCVYRSSTDPLPEQEHEYPAPAASDKAALSKRRLS 357
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLK 416
+F+C P G+S LI F K+ P W FH + + + D+ L + +L
Sbjct: 358 LIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDSDLHLLHVEERKIL- 416
Query: 417 EKVP---TKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGH-STISLPKVPAVVEHAPA 472
E+ P K + +S D V +R+W +K + G LP P +
Sbjct: 417 ERGPENWQKACFIPTKS-DANVVTFRRWFNKYSEARVDWRGKFDPFLLPPTPPREQ---- 471
Query: 473 GLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAA-ALL 531
L +RY+ HV +C C+ A K N + L A+ A++
Sbjct: 472 -----------------------LFDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMI 508
Query: 532 TALAILG---AGRQWRAFCLVSASLCLAG 557
+A+L R LV+A L A
Sbjct: 509 GVMAVLKQTTMSNVARIAVLVAAVLSFAA 537
>gi|254425031|ref|ZP_05038749.1| Pheophorbide a oxygenase family [Synechococcus sp. PCC 7335]
gi|196192520|gb|EDX87484.1| Pheophorbide a oxygenase family [Synechococcus sp. PCC 7335]
Length = 503
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 179/386 (46%), Gaps = 54/386 (13%)
Query: 100 DHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK 159
D LV +S EES + WT++WYPL + + P + + + +VL++DG
Sbjct: 19 DESALVRDSSPEES--------FQWTQQWYPLAVADYLDPQRPHAMQLLGKDVVLWRDGT 70
Query: 160 GELRCHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQ---LPADAKI-- 213
G RC ++ CPHRLA LSEG++ DGRL C YH W+F+G GKC +IPQ L +AK
Sbjct: 71 GTWRCFENACPHRLAPLSEGRIEADGRLLCAYHAWRFDGSGKCDRIPQSKDLKTEAKYCN 130
Query: 214 -PRSACVRTYEVKESQGVVWVW-------MSQKTPPNPDKLPWFENFARPGFQDVSTIHE 265
PRSA V Y +E QG++WVW P +P ++ + + +
Sbjct: 131 DPRSA-VAAYPTQERQGLIWVWGDSSAAAQQASQQRAPRTVPELDSDSNRVVRASWNFRD 189
Query: 266 LPYDHSILLENLMDPAHIPISH-----DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGR 320
L Y +EN+ DPAH+P+SH DR Y+ + P EVT T GFA
Sbjct: 190 LAYGWDFFMENVSDPAHVPVSHHGLVGDR--YTGPKFYDMPQLREVT--TQGGFAYSVTP 245
Query: 321 EKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFL-------CRPTGQGKSMLIV 373
D F+ PC+++ + E G L+ CR GQ ++V
Sbjct: 246 TPDTISTVTHDFQPPCLMRISTEF----EGSAQLILVLYATPTLPGQCRHIGQ---QILV 298
Query: 374 RFGTTGTSPWIKLF----PDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLR 429
+ T T + F P W H AS QDM FL Q +++ + + K +
Sbjct: 299 KDSTGKTPKGLAFFGLPMPTWLSHILASLFLHQDMVFLHYQEQIVAQRESQRKSWIREVY 358
Query: 430 S---IDTWVAEYRKWMDK-AGHGMPY 451
+ D V +R+W+ K AG G+P+
Sbjct: 359 TPNPQDKMVIAFRQWLAKRAGGGVPW 384
>gi|119493134|ref|ZP_01624040.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
gi|119452788|gb|EAW33964.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
Length = 443
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 198/458 (43%), Gaps = 53/458 (11%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLS 177
V+++++ + WYPL +D+ P +T+ +V++K + + D CPHRLA LS
Sbjct: 2 VSEFNFFKNWYPLSPVEDLNPQQPTPVTLLGINLVIWKPKSSQTYQVFLDECPHRLAPLS 61
Query: 178 EGQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVW 232
EG++ + G L C YHGW+F+ G C IPQ + ++ C + +E+ ++W
Sbjct: 62 EGRVDENTGNLMCSYHGWEFDQNGICTSIPQAEKPEIVSKNKENFCATQFPTQEANDLLW 121
Query: 233 VWMSQKTPPNPDKLPWF---ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
VW + K P + A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 122 VWADPNSSEQAAKTPLPLSPQIDASQGFVWSSFVRDLEYDWQTLVENVADPSHVPFAHHG 181
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKT 349
R+ P+ ++ E ++ G + FE PC L+ E
Sbjct: 182 V--QGNRKKGSPIHLKIIESNLNLIEAKY----QGFFNTKITFEPPCRLEYAIE-----F 230
Query: 350 GEKHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMGFL 407
G GL C P GKS ++ +F + K+ P W+ H ++ + V + DM FL
Sbjct: 231 GSDGKQVGLVTYCLPVSPGKSRIVAQFTRNFSQRLNKIIPRWWEHVKTRNLVLDGDMIFL 290
Query: 408 SSQNEVLLKEKVPT---KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVP 464
Q E LL++K T K Y D V E+RKW ++ G
Sbjct: 291 -HQQERLLQQKQKTESWKTAYKLPTEADRLVIEFRKWFEQYSGG---------------- 333
Query: 465 AVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL 524
P L + LP P + +RY +H HC CR A+KA W+ L
Sbjct: 334 ----KLPWKLATSQTEVLPLNKT-----RPEILDRYQQHTQHCSSCRGALKAIKRWQMGL 384
Query: 525 STAAAL-LTALAILGAGRQWRA-FCLVSASLCLAGVYA 560
+ ++ AIL + RA V +L G+YA
Sbjct: 385 LIYFIIAISTAAILPDFWRLRAGLPFVLTALVGLGIYA 422
>gi|88809638|ref|ZP_01125145.1| hypothetical protein WH7805_00500 [Synechococcus sp. WH 7805]
gi|88786388|gb|EAR17548.1| hypothetical protein WH7805_00500 [Synechococcus sp. WH 7805]
Length = 440
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 192/455 (42%), Gaps = 65/455 (14%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG-KGELRCHQDRCPHRLAKLSEGQLI 182
WTE+W+P+ +D+ P T+ ++ +VL+ DG R D CPHRL LSEG++
Sbjct: 5 WTEQWWPVAYLRDLDPGKPQRFTLLERDLVLWWDGVNSTWRAFNDVCPHRLVPLSEGRIN 64
Query: 183 D-GRLECLYHGWQFEGEGKCVKIPQL--PADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
G LEC YHGW F GEG C +IPQ+ A+ RS C + + +QG+++VW
Sbjct: 65 SAGDLECPYHGWSFNGEGHCTRIPQMGDAGRARGRRSNCA-SLPTRSAQGLLFVWSGDPE 123
Query: 240 PPNPDKLPWFENFARPG--------FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
+ LP + G QD T +LP D LLEN++D +H+P +H +T
Sbjct: 124 KAESNDLPLVPSLQEEGDGWADGWIVQD--TFRDLPMDALTLLENVLDVSHVPFTHHKT- 180
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKT 349
KRE+A P+ + D GF W G + F F+AP ++ ++ ++
Sbjct: 181 -VGKRENAAPVLAVIQSEDDSGFEAVWDEGPRRGRLGSQFTHFKAPQLMWHDLDA----K 235
Query: 350 GEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPW----IKLFPDWYFHQSASKVFEQDMG 405
G T ++ P +G+ L RF S + L P W H KV E D
Sbjct: 236 GFARILTVVYAV-PIRRGQCRLFARFPFQFKSALPKVVVGLRPRWLQHIGNHKVLEDDQV 294
Query: 406 FLSSQNEVLLKE--KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
FL Q VL + +F D +VA +W++ G G P+
Sbjct: 295 FLHWQERVLESAGGSAGAERAFFLPTEADVYVAALHRWINNHG-GEPF------------ 341
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT---W 520
LP + + L +RY H +HC+ C A++ W
Sbjct: 342 --------------AGQPLPPRQEVDA-----LMDRYHSHTVHCRSCSQALRWIRIGQPW 382
Query: 521 KNSLSTAAALLTALAILGAGRQWRAFCLVSASLCL 555
+ AA+L L +G A V A L L
Sbjct: 383 CWVVLWTAAVLIGLGQMGWLSACGALLAVFAGLLL 417
>gi|148239148|ref|YP_001224535.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 7803]
gi|147847687|emb|CAK23238.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 7803]
Length = 440
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 189/436 (43%), Gaps = 60/436 (13%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQL- 181
WTE+W+P+ +D+ P TV ++ +VL+ D G R D CPHRL LSEG++
Sbjct: 5 WTEQWWPVAYLRDLDPKRPQRFTVLERDLVLWWDASIGSWRAFDDVCPHRLVPLSEGRIN 64
Query: 182 IDGRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
G LEC YHGW F+GEG+C +IPQ+ A+A RS+C + QG+++VW T
Sbjct: 65 ASGELECPYHGWSFDGEGRCTRIPQMAEGANASGRRSSC-NSLPTCSGQGLLFVWTGDPT 123
Query: 240 ---PPNPDKLPWFENFA---RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS 293
+P +P + G+ T +LP D LLEN++D +H+P +H +T
Sbjct: 124 MAGAKDPPLVPLLQEQGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHKT--V 181
Query: 294 AKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGE 351
RE+A P+ + D GF W G + F F AP ++ ++ ++ G
Sbjct: 182 GNRENAAPVLAVIRAENDSGFEAFWEEGPRRGRLGSQFTHFSAPQLMWHDLDA----KGF 237
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWYFHQSASKVFEQDMGFL 407
T ++ P +G+ L RF S +L P W H KV E D FL
Sbjct: 238 ARILTVVYAV-PIRRGECRLFARFPFQFKSALPRLLVGLRPRWLQHIGNHKVLEDDQVFL 296
Query: 408 SSQNEVLLKE--KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPA 465
Q VL + +F D +VA +W++ G G P+
Sbjct: 297 HWQERVLESAGGSAAAERAFFLPTEADVYVAALHRWINSHG-GEPF-------------- 341
Query: 466 VVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLS 525
LP + GI + L +RY H ++C+ C A+ +
Sbjct: 342 ------------AGQRLPPRQGIAS-----LMDRYNSHTVNCRSCSQALHWIR--RGQPW 382
Query: 526 TAAALLTALAILGAGR 541
L TA ++G G+
Sbjct: 383 CWVVLWTAAVLIGVGQ 398
>gi|297746465|emb|CBI16521.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 183/440 (41%), Gaps = 89/440 (20%)
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEV 224
CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV Y
Sbjct: 2 CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKACVSVYPS 61
Query: 225 KESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILL 274
+VW W PN D K P+ P + + E+PY + +L+
Sbjct: 62 TVQNDIVWFW------PNTDPQYKDILMKNKPPYIPELDDPSYTRLMGNREIPYGYEVLI 115
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEA 334
ENLMDPAH+P +H +A RE +PL ++ + GF G+ ++G F+
Sbjct: 116 ENLMDPAHVPYAHYGI-MTADREGGRPLEMKIQKLDRSGFIGK----QEGGTSKFI---P 167
Query: 335 PCVL-----------QNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPW 383
PCV + SV+ K + +F+C P G S LI F W
Sbjct: 168 PCVFYVSSDLFIDKTNGSASSVETKKEVQRRMLLIFICIPVSPGNSRLIWTF-PRNFGVW 226
Query: 384 I-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEK---------VPTKELYFNLRSIDT 433
+ ++ P W FH + + + D+ L + ++ VPTK D
Sbjct: 227 VDRVVPRWMFHVGQNLILDSDLYLLHVEERKIMDIGPSNWQKACFVPTKS--------DA 278
Query: 434 WVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHA 493
V +RKW++K G + + +LP P
Sbjct: 279 CVVGFRKWLNKYAGGQVDWGTKFSGALPPTPP---------------------------R 311
Query: 494 PNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASL 553
L +RY+ HV++C CR A+K N + L + + ++ I+ A +Q + V+A
Sbjct: 312 EQLMDRYWSHVVNCSSCRVAIKGLNALEVVLQVIS--VASIGIVAATKQ--SLMSVAART 367
Query: 554 CLAGVYACSTAISMNTTNFI 573
L + A S ++FI
Sbjct: 368 ALVSMAVICFAASRWLSHFI 387
>gi|186686519|ref|YP_001869715.1| pheophorbide a oxygenase [Nostoc punctiforme PCC 73102]
gi|186468971|gb|ACC84772.1| Pheophorbide a oxygenase [Nostoc punctiforme PCC 73102]
Length = 482
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 197/461 (42%), Gaps = 61/461 (13%)
Query: 90 MSSSAVPTPDDHKVLVGPAS--EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTV 147
MS+S +P + + +E G +D E WYP+ +D+ P T+
Sbjct: 1 MSNSVLPQEGSQQQVTSQTKVLQEFPAGGLDPDSFDCQEVWYPVCYIEDLNKSQPTPFTL 60
Query: 148 FDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIP 205
+Q IVL+ D + R D+CPHRLA LSEG++ +G LEC YHGW F G GKC IP
Sbjct: 61 LEQNIVLWWDKNEQTWRAFIDQCPHRLAPLSEGRINHEGWLECPYHGWAFSGTGKCEFIP 120
Query: 206 Q--LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFAR--PGFQDVS 261
Q A++ + ACV T QG+++V+ + K+P E + G+ ++
Sbjct: 121 QQIQRTKAEVSQRACVATLATAVYQGMLFVYPGRAENAAKTKVPIVEPLEQDPDGWICLN 180
Query: 262 TIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW--G 319
T ++PYD L+EN++D +HIP +H RT R + P+ E+ E GF G W G
Sbjct: 181 TFRDVPYDALTLMENVLDTSHIPYTHHRT--VGNRANVSPIDLEIIESGKWGFKGTWAEG 238
Query: 320 REKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLC--RPTGQGKSMLIVRFGT 377
K F AP ++ ++ S K Y L + P +G+ L RF
Sbjct: 239 PRKGTLGRQDTTFIAPGLMWHDLTS-------KQYGRTLTVVYATPIRKGECRLFARFPF 291
Query: 378 TGTSP----WIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLK---EKVPTKELYFNLRS 430
+S ++KL P WY H ++V E D FL Q L K TK Y ++
Sbjct: 292 KFSSNLPGLFLKLTPRWYSHIGQNRVLEDDQIFLHYQERYLEKLGGSANFTKAFYLPTKA 351
Query: 431 IDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGT 490
D +V + R W+ + P VE P L V
Sbjct: 352 -DLFVFQLRSWVRQ---------------YKAEPFKVECLPPPLSKEV------------ 383
Query: 491 MHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALL 531
L +RY H C CR A+ + ++ AL+
Sbjct: 384 -----LLDRYHSHTKKCASCRPALNQIQRLRAVVAVTTALI 419
>gi|298491713|ref|YP_003721890.1| pheophorbide a oxygenase ['Nostoc azollae' 0708]
gi|298233631|gb|ADI64767.1| Pheophorbide a oxygenase ['Nostoc azollae' 0708]
Length = 442
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 205/461 (44%), Gaps = 61/461 (13%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSE 178
A++++ WYPL +D+ P+ +T+ ++V++K + R D+CPHRLA LSE
Sbjct: 3 AEFNFFHHWYPLSPVEDLDSPRPVPVTLLGIRLVIWKPRDADNYRVFLDQCPHRLAPLSE 62
Query: 179 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWV 233
G++ D G L C YHGWQF+G G C IPQ AK ++ CV + V++ ++WV
Sbjct: 63 GRVDDKTGNLMCSYHGWQFDGRGICTHIPQAENPQLVAKNQQNFCVLSLPVRQENDLLWV 122
Query: 234 WMSQK------TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
W K T P P P + GF S I +L YD L+EN+ DP+H+P SH
Sbjct: 123 WPDAKSAELAATTPLPLS-PHID--TNKGFVWSSYIRDLEYDWQTLVENVADPSHVPFSH 179
Query: 288 DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDN 347
R+ A + V + T + ++P + F+ PC+L+
Sbjct: 180 HGV--QGNRDKATSIPLNVVQSTINLIEVSISK----ALPTTITFQPPCLLE-----YAI 228
Query: 348 KTGEKHYSTGLFL-CRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMG 405
G+ GL + C P GKS ++ +F L P W+ H + + V + DM
Sbjct: 229 SIGDTDKKLGLIVYCVPVSPGKSRIVAQFTRNFAKNLHYLIPRWWEHIKIRNLVLDGDMM 288
Query: 406 FLSSQNEVLLKEKVPT---KELYFNLRSIDTWVAEYRKWMDKAGHG-MPYYFGHSTISLP 461
L Q E LL+++ + K Y S D V E+R W DK HG +P+
Sbjct: 289 LL-HQQEYLLQQRQESESWKTAYKLPTSADRLVIEFRTWFDKYCHGQLPW---------- 337
Query: 462 KVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWK 521
+ V S P + I A L +RY +H HC CR A+K +
Sbjct: 338 --------------SKVGISNP-ETKINNNRAVML-DRYHQHTQHCSSCRKALKNLQRLQ 381
Query: 522 NSLSTAAAL-LTALAILG-AGRQWRAFCLVSASLCLAGVYA 560
L T + +A+L A R +V +L GVY+
Sbjct: 382 ILLLTYVVTSVCGVAVLSDALRMQLGLPVVITALLGLGVYS 422
>gi|75907279|ref|YP_321575.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75701004|gb|ABA20680.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 499
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 204/473 (43%), Gaps = 79/473 (16%)
Query: 104 LVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELR 163
L+ A+ E+S E + WT++WYPL + + + P + + + IVL++DG + R
Sbjct: 16 LLDNATNEQSSKEENT--FQWTKQWYPLAVVEFLDPSRPHAMQLLGKDIVLWRDGSSQWR 73
Query: 164 CHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----A 217
C +D CPHRLA LSEG++ DG L C YH W+F+ +G CV IPQ + ++ +
Sbjct: 74 CFEDFCPHRLAPLSEGRVEADGTLLCAYHAWRFDAQGNCVSIPQSKDEKTAAKNCESQKS 133
Query: 218 CVRTYEVKESQGVVWVWMS-------QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDH 270
C Y +E QG++WVW + P +P E+ + + +LPY
Sbjct: 134 CAVVYPTQERQGLLWVWAEAGEQAKVESQLQTPRIVPELEDNSGKVIKSPWNFRDLPYGW 193
Query: 271 SILLENLMDPAHIPISH-----DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGS 325
+EN+ DPAH+P+SH DR AK D P+ T GFA + + +
Sbjct: 194 DYFMENVSDPAHVPVSHHGIIGDRYK-DAKFYDMIPVR---PISTQDGFAFEIQPTQGKT 249
Query: 326 MPNFLRFEAPCVLQNNRESVDNKTGE---------------KHYSTGLFLCRPTGQGKSM 370
+ F+ PC ++ S D G+ +H +F+ P G+ K
Sbjct: 250 VQGIHDFQPPCHMRIVSTSEDG--GQLILALYATPTRPGWCRHIGCQVFVKNPQGK-KPQ 306
Query: 371 LIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT-KELYFNLR 429
+ FG P W H AS QDM FL Q +++ ++K +
Sbjct: 307 GLSFFGLP--------LPVWLVHVLASLFLHQDMVFLHYQEKIIAQKKNGKWLNAVYTPN 358
Query: 430 SIDTWVAEYRKWM-DKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGI 488
D V R+W+ ++AG G+P+ G+S+ +P PA+
Sbjct: 359 PQDKMVITLRQWLKNRAGGGIPWAEGYSS----DIP------------------PAE--- 393
Query: 489 GTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR 541
L + + H HC C+ A+K N +AA+ LA++ R
Sbjct: 394 --KDKQKLFDVWTTHTQHCTVCQDALKNINRLTVLAYISAAICLFLAVILDAR 444
>gi|427720788|ref|YP_007068782.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
gi|427353224|gb|AFY35948.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
Length = 443
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 193/437 (44%), Gaps = 60/437 (13%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSE 178
+++++ + WYP+ +D+ P +TV ++V++K E R D+CPHRLA LSE
Sbjct: 3 SEFNFFQHWYPVSPIEDLDSQRPNPVTVLGLRLVIWKPKSSETYRVFLDQCPHRLAPLSE 62
Query: 179 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 233
G++ D G L C YHGWQF+ +G C IPQ + ++ C T ++ ++WV
Sbjct: 63 GRIDDKTGNLMCTYHGWQFDAQGICTHIPQAENPQLVTKNQQNLCAVTLPTRQENDLLWV 122
Query: 234 WMSQKTPPNP--DKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
W K+ LP A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 123 WPDAKSVEQAAITPLPLSPQIDANKGFVWNSFVRDLEYDWQTLVENVADPSHVPFAHHGV 182
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--NRESVDNK 348
R+ A+P+ + E T A G+ + FE PC L+ N + D K
Sbjct: 183 --QGNRDKARPISLSIEEST----ASLIEVSTAGNFSTKITFEPPCRLEYAINIGNSDKK 236
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMGFL 407
G Y C P GKS ++ +F + P W+ H + + V + DM L
Sbjct: 237 MGLVTY------CIPVSPGKSRIVAQFPRNFAQTLHRFIPRWWDHITNRNLVLDGDMILL 290
Query: 408 SSQNEVLLKEKVPT---KELYFNLRSIDTWVAEYRKWMDKAGHG-MPYYFGHSTISLPKV 463
SQ E L+++ T K Y S D V E+R W DK G +P+ ISLP+
Sbjct: 291 -SQQEYFLQQRQLTESWKTAYKLPTSADRLVIEFRNWFDKYCQGRLPW--QEVGISLPED 347
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNS 523
+ ++ L +RY +H HC CR+ +K +
Sbjct: 348 LTINDNRLVVL-----------------------DRYNQHTRHCSSCRNTLKTIQWLR-- 382
Query: 524 LSTAAALLTALAILGAG 540
AALL I+ +G
Sbjct: 383 ----AALLAYFIIVVSG 395
>gi|302824059|ref|XP_002993676.1| hypothetical protein SELMODRAFT_137430 [Selaginella moellendorffii]
gi|300138499|gb|EFJ05265.1| hypothetical protein SELMODRAFT_137430 [Selaginella moellendorffii]
Length = 500
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 178/418 (42%), Gaps = 46/418 (11%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDR 168
EE +R +DW EWYP+ + +++ P +T+ ++V++ D G+ + D+
Sbjct: 61 EEALEQTKRSTWFDWNSEWYPVAIEQELDKGVPHAVTILGNELVVWWDSNGKNWQVFSDK 120
Query: 169 CPHRLAKLSEGQL-IDGRLECLYHGWQFE-GEGKCVKIPQL-PADAKIPRS--ACVRTYE 223
CPHRLA LSEG++ +G ++C YHGW F G G C +IPQ P D + S AC Y
Sbjct: 121 CPHRLAPLSEGRIGENGHIQCSYHGWIFAPGTGSCSRIPQAQPGDLSVRLSPRACATVYP 180
Query: 224 VKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 283
E QG++W+ S + + K P+F F ++PY + L+ENLMDP H+
Sbjct: 181 SMEQQGILWMNFS-ASASSQIKPPFFPVLEDADFVHYWATSDVPYGYEALIENLMDPTHV 239
Query: 284 PISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVL---QN 340
P +H + R A P+ + V + GF G GR MP L F + Q
Sbjct: 240 PFAHHKLQ--GNRNKAGPVSYTVNKFDRHGFKGSTGRGDVVFMPP-LSFVMEIRIPPKQK 296
Query: 341 NRESVDNKTGEKHYST-GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKV 399
+ +K E T +F+C P G+S F P W H V
Sbjct: 297 VLSKLWSKLEESDKITYTVFMCVPVLPGRSKAFWSFPRNFAKSIHFYTPRWLAHLRHMLV 356
Query: 400 FEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTIS 459
+ D+ L ++++K E + S D +V +R+W+ G P Y H
Sbjct: 357 LDSDLYLLH-----IMEQKQERNEREYIPTSADAFVLGFRRWLSVYAGGAPGYAPHIDRK 411
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAF 517
LP P L +RY HV C C +A+++F
Sbjct: 412 LPSSPP---------------------------KQQLMDRYENHVKRCPTCMAALRSF 442
>gi|427718650|ref|YP_007066644.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
gi|427351086|gb|AFY33810.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
Length = 464
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 197/450 (43%), Gaps = 62/450 (13%)
Query: 100 DHKVLVGPASEEESR-GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG 158
++ V V S EE R G + +D E WYP+Y D+ P T+ + IV++ D
Sbjct: 3 ENVVNVSDRSVEEIRVGGSELDYFDCQEAWYPVYYLDDLEQSQPTPFTLLGRDIVIWWDK 62
Query: 159 KGEL-RCHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPAD--AKIP 214
+ +L R D+CPHRLA LSEG++ DG LEC YHGW F G G C +IPQ + A+
Sbjct: 63 QAKLWRAFDDQCPHRLAPLSEGRINQDGLLECPYHGWAFSGSGSCDRIPQQVVNGIAETS 122
Query: 215 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSI 272
+ ACV + E QG+++V+ ++P + V +T +LPYD
Sbjct: 123 QRACVASLPTAERQGLLFVYPGNPENATKTQIPIVAPLEESPTEWVCLNTFRDLPYDALT 182
Query: 273 LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWG----REKDGSMPN 328
LLEN++D +H+P +H R+ R +A P+ EV +GF G W R K G
Sbjct: 183 LLENVLDSSHLPFTHHRS--VGNRANAAPVELEVISSNKQGFTGIWEEGPRRGKLGRQET 240
Query: 329 FLRFEAPCVLQNNRESVD-NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----W 383
+F AP ++ ++ S +T Y+T P +G+ L RF +
Sbjct: 241 --KFIAPGLMWHDLTSKQFGRTLTVVYAT------PIRKGECRLFARFPFKFPNKLPGLL 292
Query: 384 IKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVP---TKELYFNLRSIDTWVAEYRK 440
+KL P WY H + + E D FL Q L + TK Y ++ D++V E R+
Sbjct: 293 MKLTPRWYNHIGQNGILEDDQIFLHYQERYLEAKGGSTNFTKAFYLPTKA-DSFVFELRQ 351
Query: 441 WMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRY 500
W+++ + P +LP K + L +RY
Sbjct: 352 WVNQ----------YQVNPFP-----------------GETLPPK-----LTKEQLLDRY 379
Query: 501 FRHVIHCKGCRSAVKAFNTWKNSLSTAAAL 530
H C CR A+ K + A+
Sbjct: 380 HSHTKKCASCRGALSRIQQLKFWCAVIGAI 409
>gi|41469411|gb|AAS07234.1| putative iron-sulfur cluster-binding protein [Oryza sativa Japonica
Group]
Length = 521
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 144/534 (26%), Positives = 214/534 (40%), Gaps = 87/534 (16%)
Query: 33 SLHSLFFSPL-LKIPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMS 91
SLH L + L L PS PP ISP A + R+ + P V+ ++
Sbjct: 5 SLHLLSLTRLSLPFRDTVTNPSTPRIPPWRRQWISPTDARR-RRLSMP-------VSAVA 56
Query: 92 SSA-VPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQ 150
+ A +P D K E + GE R +DW ++WYP+ +D+ P G V
Sbjct: 57 AEAPLPRAVDEK-------ETPAAGEER---FDWLDQWYPVAPVRDLDKRKPHGKMVMGI 106
Query: 151 QIVLYKDGKG-ELRCHQDRCPHRLAKLSEGQLIDGR--LECLYHGWQFEGEGKCVKIPQL 207
+V++ DG G E R D CPHRLA LSEG+ +DG+ L+C YHGW F+G G C IPQ
Sbjct: 107 SVVVWFDGGGGEWRVVDDACPHRLAPLSEGR-VDGKGCLQCAYHGWCFDGHGSCQFIPQA 165
Query: 208 PA---DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQD 259
PA ACV +Y ++W + + P + L P+ P
Sbjct: 166 PALGPPVHKNSKACVASYPSVVQNNILWFY-PRSEPEYKEILQRKRPPYIRELDDPSSVI 224
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHD-------RTDYSAKREDAQPLGFEVTERTDR 312
S + +L Y + +L+EN MDPAH+P +H R + + E P+ + E
Sbjct: 225 NSGVRDLLYGYELLVENFMDPAHVPYAHRGQFPHVPREEDIGRYEGGLPIKMNIEELNIA 284
Query: 313 GFAG----QWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGK 368
GF WG + +F AP V Q+N + + K E T +F C P G+
Sbjct: 285 GFHSNPEENWG---------YFKFIAP-VDQDNNNTNNKKQPE---VTTVFFCIPVSPGR 331
Query: 369 SMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFL--SSQNEVLLKEKVPTKELYF 426
+I G + K+ P W+ H ++V + D L +N K Y
Sbjct: 332 CRVIWANGYNLDGWFDKMIPRWWLHIKTNQVLDSDSSVLHIEERNYAAFGLDNWHKACYV 391
Query: 427 NLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKG 486
S D + +R W K + + LP VE
Sbjct: 392 PTSS-DNLIIAFRNWFKKYCNNQVGWLTPMVNQLPPASTRVE------------------ 432
Query: 487 GIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAG 540
+ RY+ HV+ C C +A+K + +L A+ + G G
Sbjct: 433 ---------VYERYWSHVMQCTSCSAALKWMRALEVALQVASVAVVGFLAAGKG 477
>gi|294464913|gb|ADE77961.1| unknown [Picea sitchensis]
Length = 480
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 183/447 (40%), Gaps = 80/447 (17%)
Query: 108 ASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQ 166
+S +E +G+ ++W WYP D+ P TV IV++ D + + +
Sbjct: 77 SSNDEQQGDE--GKFNWFSHWYPAAPEYDLDKRVPHAFTVMGLDIVVWWDKRSQTWQVFD 134
Query: 167 DRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTY 222
D CPHR A LSEG++ DG L+C YHGW F +G C IPQ P+D + AC TY
Sbjct: 135 DSCPHRRAPLSEGRIDEDGDLQCSYHGWCFGPKGDCKYIPQEPSDGPRVHTSKRACASTY 194
Query: 223 EVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSI 272
+ QG++W W PN D K P + P F ++ +LPY + I
Sbjct: 195 PSLQQQGIIWFW------PNTDPQFKDTALEKKPPLIPALSDPSFPCTLSMRDLPYGYEI 248
Query: 273 LLENLMDPAHIPISH---------DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKD 323
L ENLMDP+H+P +H + S KR +PL + + GF G+
Sbjct: 249 LTENLMDPSHVPYAHYGLGSQTPMPWNNISFKRA-GRPLDLCLERLDESGFRGK------ 301
Query: 324 GSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG------------LFLCRPTGQGKSML 371
+ F F PCV ++ +K G+ S +F+C P G+S L
Sbjct: 302 -QVTGFSNFTPPCVYVSHHTFKTSKEGKPQPSISGTEQEKMKTIFFIFICIPVSPGRSRL 360
Query: 372 IVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKE-KVPTKELYFNLRS 430
I F +L P W H + + D+ FL + L K ++ + +
Sbjct: 361 IWAFPRNFALWMYRLLPRWLTHIQQNLFPDSDLYFLHLEERKLQNYGKTNWEKACYVPTA 420
Query: 431 IDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGT 490
D +V +RKW+ + + + SLP P +
Sbjct: 421 ADAFVVAFRKWLKRYANNGVDWGKSFDGSLPPSPPKEQ---------------------- 458
Query: 491 MHAPNLANRYFRHVIHCKGCRSAVKAF 517
L +RY HV+ C+ C+ A+ F
Sbjct: 459 -----LMDRYRSHVVKCRSCKGALNVF 480
>gi|384251580|gb|EIE25057.1| hypothetical protein COCSUDRAFT_65076 [Coccomyxa subellipsoidea
C-169]
Length = 560
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 227/544 (41%), Gaps = 94/544 (17%)
Query: 81 LTKCHAVTDMSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDD 140
L H + + +AV P + +E+ + E+ +DW ++WYPL +D+
Sbjct: 50 LVPAHGIA--AGTAVLAPQQGQGFFAAGEQEQIKSEQ---PFDWAKQWYPLGFLEDLDPK 104
Query: 141 APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL--IDGRLECLYHGWQFEGE 198
P + + Q++VL+ DG+G+ RC QD+CPHRLA LSEG++ DG L C YHGW+F+GE
Sbjct: 105 VPHPVELLSQRLVLWCDGQGQWRCFQDKCPHRLAPLSEGRIEPSDGTLMCSYHGWRFDGE 164
Query: 199 GKCVKIPQLPADAKIPRSACVR------TYEVKESQGVVWVW----------MSQKTPPN 242
GKC IPQ DAK SAC ++ + QG VWV+ + P
Sbjct: 165 GKCTDIPQ-SLDAKANASACANPRSCAISHPTQVLQGKVWVYGEGGPRTFIDSAAVQPAR 223
Query: 243 PDKLPWFENFARPGFQDVSTI-----HELPYDHSILLENLMDPAHIPISHDRTDYSAKRE 297
L E+ G + + + PY +L ENL+DP+H+ SH +E
Sbjct: 224 APNLAVGESVREAGGGEALRLVQPYTRDFPYAWDVLAENLLDPSHVNFSHHGIIGDRDKE 283
Query: 298 DA---------QPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK 348
D+ +P + T W R+ ++F APC++Q
Sbjct: 284 DSGLTRISPGPEPAAAPSAQDTISMEVETWVRQARKVDKWGVQFIAPCLIQWKFRLPWGN 343
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTS-PWIKLFPDWYFH-------QSASKVF 400
T +T F PT GKS ++ T P L YF + ++++
Sbjct: 344 T-----NTLNFYMIPTAPGKSRFMLDSYTQKEGMPLPVLLILKYFAIPWLPHLRMSNRIL 398
Query: 401 EQDMGFLSSQNEVLLKEKVPT----KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHS 456
+ D L Q + +E ++ YF D +VA++R+W+D+ G P + S
Sbjct: 399 DGDTALLHWQGHSVAREAKEEGRTWRQAYFMPTPADRYVAKFRQWLDERAGGGPTPYDPS 458
Query: 457 TISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKA 516
LP + E + +R+ H +HCK C+ +
Sbjct: 459 H-PLPPLETSKE--------------------------TILDRWNSHTMHCKACQQGFRI 491
Query: 517 FNTWKNSLSTAAAL--LTALAILGAGRQWRAFCLVS--ASLCLAGVYACSTAISMNTT-- 570
+ + + AL L A+LG GR L+S +L AG C+ A + +
Sbjct: 492 VQAAQIAAAVLGALCMLGLSAVLGQGRP-----LLSRLPALLGAGAIVCAVAWRLLKSFK 546
Query: 571 -NFI 573
NFI
Sbjct: 547 QNFI 550
>gi|17231846|ref|NP_488394.1| hypothetical protein alr4354 [Nostoc sp. PCC 7120]
gi|17133490|dbj|BAB76053.1| alr4354 [Nostoc sp. PCC 7120]
Length = 443
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 200/456 (43%), Gaps = 52/456 (11%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEG 179
++++ + WYP+ +D+ P +T+ ++V++K E R D+CPHRLA LSEG
Sbjct: 4 EFNFFQHWYPVSPIEDLDPKRPTPVTLLGIRLVIWKPQSSEGFRIFIDQCPHRLAPLSEG 63
Query: 180 QLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVW 234
++ D G L C YHGWQF+ EG C IPQ + ++ CV + V++ ++WVW
Sbjct: 64 RVDDKTGNLMCSYHGWQFDPEGVCTHIPQAENPEIVTKNQKDFCVISLPVRQQNDLLWVW 123
Query: 235 MSQKTPPNPDKLPW---FENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
K+ D+ P + A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 124 PDVKSQELADQTPLPLSPQVDASKGFVWSSFVRDLEYDWQTLVENVADPSHVPFAHHGV- 182
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGE 351
RE A+ + + T G DG + FE PC L+ G
Sbjct: 183 -QGNREQARATPISIMQST----PGLIEAVADGRFKAKITFEPPCRLEYA-----ISIGN 232
Query: 352 KHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMGFLSS 409
GL C P GKS ++ +F L P W+ H ++ + V + DM L
Sbjct: 233 DGKKVGLVTYCLPVSPGKSRIVAQFPRNFAKILYHLTPRWWDHVKTRNLVLDGDMILLKQ 292
Query: 410 QNEVLLKEKVPT--KELYFNLRSIDTWVAEYRKWMDKAGHG-MPYYFGHSTISLPKVPAV 466
Q L + ++ K +Y S D V E+RKW DK G +P+
Sbjct: 293 QEHFLQERQLSASWKTVYKMPTSADRLVIEFRKWFDKYCEGQLPWK-------------- 338
Query: 467 VEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNS-LS 525
G++ S +G L +RY +H HC CR A+K + L
Sbjct: 339 --------EVGIAIS---EGSTINDSRDTLLDRYKQHTQHCSSCRDALKNIKRLQVILLG 387
Query: 526 TAAALLTALAIL-GAGRQWRAFCLVSASLCLAGVYA 560
A +++ +A+L + R L+ ++ G+Y+
Sbjct: 388 YFAIIISGVAVLPDSLRVQLGLPLIITAILGLGLYS 423
>gi|30102998|gb|AAP21411.1| putative cell death suppressor protein [Oryza sativa Japonica
Group]
gi|108711642|gb|ABF99437.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 555
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 203/511 (39%), Gaps = 75/511 (14%)
Query: 91 SSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQ 150
S+ A TP H + G ++W ++WYP+ D+ P G V
Sbjct: 54 SAVAAETPPPHARAEEEEEAAPAVGGGEEGRFEWLDQWYPVAPVCDLDPRKPHGKMVMGL 113
Query: 151 QIVLYKDGKG--ELRCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQL 207
++V + DG G E R D CPHRLA LSEG++ GRL+C YHGW F+G G C IPQ
Sbjct: 114 RVVAWFDGGGGGEWRVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQA 173
Query: 208 PA---DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQD 259
PA ACV +Y ++W + + P + L P+F + P F
Sbjct: 174 PALGPPVHKNSKACVASYPSVVQNNILWFY-PRSEPEYKEILQRKRPPYFPDLDDPSFNT 232
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDA----------------QPLG 303
V + +L Y + +L+ENLMDPAH+P +H +ED Q G
Sbjct: 233 VFGVRDLFYGYDVLVENLMDPAHVPYAHKGLMPIQNKEDPGRYCSTVHLLSTVESDQEGG 292
Query: 304 FEVTERTDRG-FAGQWGREKDGSMPNFLRFEAPCVL-----QNNRESVDN----KTGEKH 353
+ V RT++ G ++D +++F+APC L + +D K ++
Sbjct: 293 YPVKIRTEQAKIDGFLSVQEDDVC--YMKFDAPCTLYGKPFRTKEPQIDQGKEKKKKKQP 350
Query: 354 YSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEV 413
+ +FLC P G+S LI F + + P W +H + V + D L +
Sbjct: 351 EAMTVFLCVPVAPGRSRLIWAFPRNVDAWLDNIIPRWLYHIVTNIVLDSDSYLLHIEERN 410
Query: 414 LLKEKVPT--KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAP 471
+ K Y S D V +R W K Y H
Sbjct: 411 FATVGLDNWHKACYVPTSS-DNMVITFRNWFRK-------YCKHQI-------------- 448
Query: 472 AGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALL 531
G ++ LP T + RY HV+ C C +A+K + +L A+ +
Sbjct: 449 -GWATPMANQLPP-----TPTKDQVLERYRSHVMQCTSCSAALKKMKALEVALQVASVAI 502
Query: 532 TALAILGAGRQW-----RAFCLVSASLCLAG 557
+ G RA + +A LC A
Sbjct: 503 VGFLAVAKGSLAPSVVRRAAAVSTAVLCFAA 533
>gi|75907526|ref|YP_321822.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75701251|gb|ABA20927.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 443
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 198/441 (44%), Gaps = 70/441 (15%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEG 179
++++ + WYP+ +D+ P +T+ ++V++K + R D+CPHRLA LSEG
Sbjct: 4 EFNFFQHWYPVSPIEDLDPKRPTPVTLLGIRLVIWKPKSSDSFRIFIDQCPHRLAPLSEG 63
Query: 180 QLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVW 234
++ D G L C YHGWQF+ EG C +IPQ + ++ CV + V++ ++WVW
Sbjct: 64 RIDDKTGNLMCSYHGWQFDTEGVCTRIPQAENPEIVTKNQKDFCVNSLPVRQENDLLWVW 123
Query: 235 -------MSQKTP----PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 283
++ +TP P D A GF S + +L YD L+EN+ DP+H+
Sbjct: 124 PDVNSQELAHQTPLPLSPQVD--------ASKGFVWTSFVRDLEYDWQTLVENVADPSHV 175
Query: 284 PISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRE 343
P +H + ++ A+P+ + G DG + + FE PC L+
Sbjct: 176 PFAHHGVQGNREQGRARPISIM------QSTPGLIEAVADGLVTAKITFEPPCRLEYAI- 228
Query: 344 SVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQ 402
SV N + T C P GKS ++ +F +L P W+ H ++ + V +
Sbjct: 229 SVGNDGKQLGLVT---YCLPVSPGKSRIVAQFPRNFAKTLHRLTPRWWDHIKTRNLVLDG 285
Query: 403 DMGFLSSQNEVLLKEKVPT--KELYFNLRSIDTWVAEYRKWMDK-AGHGMPYYFGHSTIS 459
DM L+ Q ++ + ++ K Y S D V E+RKW DK G+P+ I
Sbjct: 286 DMILLNQQEHLIQQRQLSASWKTAYKMPTSADRLVIEFRKWFDKYCDGGLPW--KEVGIP 343
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT 519
+P+ A+ ++ L +RY +H HC CR NT
Sbjct: 344 IPEAAAINDNRDV-----------------------LLDRYKQHTRHCSSCR------NT 374
Query: 520 WKNSLSTAAALLTALAILGAG 540
KN LL A++ +G
Sbjct: 375 LKNIERLQLILLGYFALVISG 395
>gi|260434502|ref|ZP_05788472.1| rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 8109]
gi|260412376|gb|EEX05672.1| rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 8109]
Length = 465
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 195/453 (43%), Gaps = 72/453 (15%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQLI 182
WTE+W+P+ +D+ + P T+ ++ +V++ D R D CPHRL LSEG++
Sbjct: 36 WTEQWWPISYVQDLDPNQPSRFTLLERDLVIWWDRAASSWRVFPDVCPHRLVPLSEGRIN 95
Query: 183 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP---RSACVRTYEVKESQGVVWVWMSQK 238
+ G LEC YHGW F+G G+C ++PQ D P RS C + QG+++VWM
Sbjct: 96 EEGLLECPYHGWSFDGGGQCQRVPQA-LDNTQPNNRRSRCA-SLPTATGQGLLFVWMGAP 153
Query: 239 TPPNPDKLPWFENFARPGFQD-------VSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
+P +LP P +D T +LP D LLEN++D +H+P +H RT
Sbjct: 154 DAADPSQLPLV-----PALEDNPDSWTVQDTFRDLPMDAVTLLENVLDVSHVPFTHHRT- 207
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKT 349
KR++A P+ +T GF W G + F AP ++ ++ +
Sbjct: 208 -VGKRKNAAPVEASITGEDASGFTAYWEEGPRRGKLGAQSTTFNAPQLMWHDLTA----K 262
Query: 350 GEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMG 405
G T ++ P +G+ L RF S I L P W H KV E D
Sbjct: 263 GFGRILTVVYAV-PIRRGECRLFARFPFQFQSAVPRLLIGLRPRWLQHIGNHKVLEDDQV 321
Query: 406 FLSSQNEVLLKE--KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
FL Q VL + + +F + D +VA +W++ G G P+
Sbjct: 322 FLHWQERVLERAGGSSAVERSFFMPTTADVYVAALHRWLNANG-GEPF------------ 368
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSA---VKAFNTW 520
LP + L +R+ H IHC+ C S ++A W
Sbjct: 369 --------------AGQPLPPR-----QTTTALMDRHNSHTIHCRSCSSVLRRIRAARPW 409
Query: 521 KNSLSTAAALLTALAILGAGRQWRAFCLVSASL 553
+L +A+L + G W + LV+A+L
Sbjct: 410 AWALIWGSAVLIGIQ---QGSGWSSTGLVTAAL 439
>gi|428208093|ref|YP_007092446.1| Pheophorbide a oxygenase [Chroococcidiopsis thermalis PCC 7203]
gi|428010014|gb|AFY88577.1| Pheophorbide a oxygenase [Chroococcidiopsis thermalis PCC 7203]
Length = 474
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 164/342 (47%), Gaps = 26/342 (7%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSE 178
A +D E WYP++ +D+ P T+ Q I ++ + + E R +D+CPHRLA LS+
Sbjct: 25 AFFDCQEVWYPVHYVQDLDKSKPTPFTLLGQDIAIWWEQQAECWRVFEDKCPHRLAPLSQ 84
Query: 179 GQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTY-EVKESQGVVWVW 234
G++ DG LEC YHGW F G G C +IPQ A S ACVR+ + QG+++V+
Sbjct: 85 GRIAEDGLLECPYHGWAFAGAGDCQRIPQQVAGQAAVTSPRACVRSLPTIVVKQGLLFVY 144
Query: 235 MSQKTPPNPDKLPWFENFAR--PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDY 292
+ K+P E G+ + T +LPYD L+EN++D +H+P +H R+
Sbjct: 145 PGKAENATKTKVPVIEPLEESLEGWVCIDTFRDLPYDALTLMENVLDASHVPFTHHRS-- 202
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NKT 349
R +A + EV E GF G W G + F AP ++ ++ S +T
Sbjct: 203 VGNRANASSVELEVVESGKHGFTGVWQEGPRRGTLGRQDTTFVAPGLMWHDLTSKQFGRT 262
Query: 350 GEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP---W-IKLFPDWYFHQSASKVFEQDMG 405
Y+T P +G+ L RF S W IKL P WY H + V E D
Sbjct: 263 LTAVYAT------PIRKGECRLFARFPFKFASKLPGWIIKLTPRWYSHLGQNSVLEDDQI 316
Query: 406 FLSSQNEVLLKEKVP---TKELYFNLRSIDTWVAEYRKWMDK 444
FL Q L TK Y ++ D +V E R+W+++
Sbjct: 317 FLHYQERYLEAGGGSGNFTKAFYLPTQA-DAFVVELRQWVNQ 357
>gi|113953594|ref|YP_731035.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
CC9311]
gi|113880945|gb|ABI45903.1| cell death suppressor protein Lls1 homolog [Synechococcus sp.
CC9311]
Length = 440
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 192/448 (42%), Gaps = 75/448 (16%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSEGQLI 182
W+E+W+P+ +D+ P T+ +Q +VL+ D G+ R +D CPHRL LSEG++
Sbjct: 5 WSEQWWPVAYLRDLDRTRPQRFTLLEQDLVLWWDAPGQCWRAFEDVCPHRLVPLSEGRIN 64
Query: 183 D-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
+ G+LEC YHGW F+G+G C IPQ+ A ++ R+ C ++ QG+++VW +
Sbjct: 65 EAGQLECPYHGWSFDGQGTCRAIPQMGERARSESKRTGC-GSFPTATGQGLLFVWSGTAS 123
Query: 240 PPNPDKLPWFENFARPG--------FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
+ LP G QD T +LP D LLEN++D +H+P +H RT
Sbjct: 124 AADSAALPLVPVLQEQGDGWADGWIVQD--TFRDLPMDALTLLENVLDVSHVPFTHHRT- 180
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQWG----REKDGSMPNFLRFEAPCVLQNNRESVDN 347
KRE+A P+ +T +GF W R K GS F AP ++ ++ +
Sbjct: 181 -VGKRENASPVEAVITREDSQGFEAFWQEGPRRGKLGSQDT--HFRAPQLMWHDLTA--- 234
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVR----FGTTGTSPWIKLFPDWYFHQSASKVFEQD 403
G T ++ P +GK L R F + L P W H KV E D
Sbjct: 235 -KGFARILTVVYAV-PISRGKCRLFARFPFQFKAAAPRLLVGLRPRWLQHIGNHKVLEDD 292
Query: 404 MGFLSSQNEVL--LKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLP 461
FL Q VL ++ + S D +V +W+++ G G P+
Sbjct: 293 QVFLHWQERVLETAGGSAAAEQAFVLPTSADIYVKALHRWVNRQGGG-PF---------- 341
Query: 462 KVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT-- 519
LP + L +RY H HC+ C A++ +
Sbjct: 342 ----------------AGRPLPPR-----QEVEALMDRYHSHTKHCRSCSVALRRIRSLR 380
Query: 520 -------WKNSLSTAAALLTALAILGAG 540
W +++ A L+ L LG G
Sbjct: 381 PWLWGSLWLSAVLIGAGQLSWLLWLGVG 408
>gi|414079207|ref|YP_007000631.1| pheophorbide a oxygenase [Anabaena sp. 90]
gi|413972486|gb|AFW96574.1| pheophorbide a oxygenase [Anabaena sp. 90]
Length = 443
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 205/432 (47%), Gaps = 49/432 (11%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSE 178
+++++ + WYPL +D+ P +T+ +++V++K K E R D+CPHRLA LSE
Sbjct: 3 SEFNFFQHWYPLIPIEDLEPHKPKPMTLLGKRLVIWKPTKSETYRVFLDQCPHRLAPLSE 62
Query: 179 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 233
G++ D G L C YHGW+F G C ++PQ + ++ CV ++ V++ Q ++WV
Sbjct: 63 GRIEDKTGNLMCSYHGWEFNENGICQRVPQAENPEIVTKNQDNFCVISFPVRQQQELLWV 122
Query: 234 WMSQKTPPNPDKLPWF---ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
W +KT + P + A GF + I +L YD L+EN+ DP+H+P +H
Sbjct: 123 WPDEKTAAIAENTPLPLSPQIDAEKGFVWSNYIRDLEYDWQTLVENVADPSHVPFAHHGV 182
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
R+ AQP+ + + T R +P + FE PC L+ S+ N TG
Sbjct: 183 --QGNRDKAQPIPINIVKSTMDLIEVDIAR----GLPTTITFEPPCRLEYAI-SLGN-TG 234
Query: 351 EKHYSTGLFL-CRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASK-VFEQDMGFLS 408
+K GL + C P GKS ++ +F ++ P W+ H + V + DM FL
Sbjct: 235 KK---LGLVVYCIPVSPGKSRIVAQFPRNFAKTLHRIIPRWWNHINERHLVLDGDMIFLQ 291
Query: 409 SQNEVLLKEKVPT--KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAV 466
Q L ++++ K Y + D V E+R W DK + S + ++
Sbjct: 292 QQEYYLQQKQLTQSWKTAYKLPTNADRLVIEFRNWFDK--------YCQSKLPWQEI--- 340
Query: 467 VEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWK-NSLS 525
G++ S P I A L +RY +H HC CR+AVK + L+
Sbjct: 341 ----------GINGSEPTT--INENRAEVL-DRYKQHTQHCSSCRTAVKNLERLQIGLLA 387
Query: 526 TAAALLTALAIL 537
+++ +A+L
Sbjct: 388 YFVIVISGVALL 399
>gi|87124080|ref|ZP_01079930.1| cell death suppressor protein [Synechococcus sp. RS9917]
gi|86168649|gb|EAQ69906.1| cell death suppressor protein [Synechococcus sp. RS9917]
Length = 439
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 198/458 (43%), Gaps = 67/458 (14%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQL- 181
W+E+W+P+ D+ P T+ ++ +VL+ D + G+ R D CPHRL LSEG++
Sbjct: 5 WSEQWWPVAYLCDLDRGRPSRFTLLERDLVLWWDREAGQWRAFDDVCPHRLVPLSEGRIN 64
Query: 182 IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKT 239
+G+LEC YHGW F+G G C +IPQ+ +A+ RS+C R+ +QG+++VW
Sbjct: 65 AEGQLECPYHGWSFDGSGHCRRIPQMTEEARPEGRRSSC-RSLPTASAQGLLFVWSGDPA 123
Query: 240 PPNPDKLPWF-------ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDY 292
+P LP E +A G+ T +LP D LLEN++D +H+P +H RT
Sbjct: 124 SADPAALPLVPVLQEQGEGWA-DGWVVQDTFRDLPMDALTLLENVLDVSHVPFTHHRT-- 180
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQWG----REKDGSMPNFLRFEAPCVLQNNRESVDNK 348
+R++A P+ E+T GF W R K GS F AP ++ ++ +
Sbjct: 181 VGRRDNAAPVQAEITREDGTGFEAFWQEGPRRGKLGSQATC--FRAPQLMWHDLTA---- 234
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVR----FGTTGTSPWIKLFPDWYFHQSASKVFEQDM 404
G T ++ P G+ L R F + L P W H KV E D
Sbjct: 235 KGFARILTVVYAV-PIRPGECRLFARFPFQFQAAAPRLLLGLRPRWLQHIGNHKVLEDDQ 293
Query: 405 GFLSSQNEVL--LKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPK 462
FL Q VL + ++ D +VA +W+ + G G P+
Sbjct: 294 VFLHWQERVLEAAGGSAAAENAFYLPTDSDCYVAALHRWVQRQGGG-PF----------- 341
Query: 463 VPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKN 522
+LP + G+ L +R H HC+ C A++ +
Sbjct: 342 ---------------PGRALPPRQGLEA-----LMDRERSHTRHCRSCSGALQRLRALRP 381
Query: 523 SLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYA 560
L L AL LG QW + V L LA A
Sbjct: 382 WLIAMLWLSAALVGLG---QWGSISAVGLGLALASGLA 416
>gi|218440057|ref|YP_002378386.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
gi|218172785|gb|ACK71518.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
Length = 442
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 203/461 (44%), Gaps = 63/461 (13%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEG 179
++++ ++WYPL +D+ P +T+ ++V++K + + D+CPHRLA LSEG
Sbjct: 4 EFNFFQQWYPLSPVEDLDPKRPTPVTLLGLRLVIWKPPSSDTYQVFIDQCPHRLAPLSEG 63
Query: 180 QL--IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVW 234
++ G L C YHGW+F+ +G C +IPQ + CVR + ++ ++WVW
Sbjct: 64 RIDPKTGYLMCSYHGWEFDTQGTCQRIPQAEKPEIVQEKVQQWCVRVFPTRQENDLLWVW 123
Query: 235 MSQKTP------PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
+ + P P P + A+ GF S + +L YD L+EN+ DP+H+P SH
Sbjct: 124 PDENSAELAASTPLPLS-PLLD--AKKGFVWSSMVRDLDYDWQTLVENVADPSHVPFSHH 180
Query: 289 RTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNK 348
RE A+P+ ++ E K + + FE PC L+ N
Sbjct: 181 --GIQGDREKARPVPIKIIESLPHRIQATVEIRKGTT----ITFEPPCHLEYN-----IS 229
Query: 349 TGEKHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMGF 406
G++ GL C P GKS ++ +F + L P W+ H + V + DM
Sbjct: 230 VGDQGKQVGLVTYCIPVMPGKSRIVAQFPRNFAKTFHHLTPRWWNHIMERNAVLDGDMIL 289
Query: 407 LSSQNEVLLK--EKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG-MPYYFGHSTISLPKV 463
L Q L + ++ K Y S D V E+R W DK G +P+ T PK+
Sbjct: 290 LQQQEYFLRQREQQESWKTAYKMPTSADRLVTEFRNWFDKYCQGQLPWNTVGITPDPPKI 349
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNS 523
E + +RY +H HC+ CR+A+K +
Sbjct: 350 NDRRE--------------------------EVLDRYRQHTQHCRSCRNALKTVQKMQIF 383
Query: 524 LSTAAALLTA-LAILGAGRQWR---AFCLVSASLCLAGVYA 560
L A+ A +A+L QWR F L+ +L G+Y+
Sbjct: 384 LLAFFAVTVATVAVLPD--QWRLSLGFPLIIVALLGLGLYS 422
>gi|33865393|ref|NP_896952.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
WH 8102]
gi|33632562|emb|CAE07374.1| cell death suppressor protein Lls1 homolog [Synechococcus sp. WH
8102]
Length = 455
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 181/407 (44%), Gaps = 58/407 (14%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQLI 182
WTE+W+P+ +D+ P T+ ++ +V++ D GE R D CPHRL LSEG++
Sbjct: 13 WTEQWWPISYLQDLDPQRPNRFTLLERDLVIWWDQSGESWRVFPDVCPHRLVPLSEGRIN 72
Query: 183 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKT 239
D G+LEC YHGW F+G+G+C +IPQ + + RS C + +QG+++VWM
Sbjct: 73 DAGQLECPYHGWSFDGDGQCRQIPQALENTQPDSRRSRCA-SLPTASAQGLLFVWMGSPD 131
Query: 240 PPNPDKLPWF----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
+P++LP EN QD T +LP D LLEN++D +H+P +H +T K
Sbjct: 132 SADPEQLPLVPALEENPDSWTVQD--TFRDLPMDAVTLLENVLDVSHVPFTHHKT--VGK 187
Query: 296 REDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKH 353
RE+A P+ +T GF W G + F AP ++ ++ + G
Sbjct: 188 RENAAPVEATITAEDASGFKAYWEEGPRRGKLGAQSTTFLAPQLMWHDLTA----KGFGR 243
Query: 354 YSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMGFLSS 409
T ++ P +G+ L RF S I L P W H KV E D FL
Sbjct: 244 ILTVVYAV-PIRRGECRLFARFPFQFQSALPRLLIGLRPRWLQHIGNHKVLEDDQVFLHW 302
Query: 410 QNEVL--LKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVV 467
Q L + +F + D +VA +W++ G G P+
Sbjct: 303 QERTLEAAGGSAAAERAFFLPTAADVYVAALHRWLNHNG-GEPF---------------- 345
Query: 468 EHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAV 514
LP + L +RY H IHC+ C +A+
Sbjct: 346 ----------AGQPLPNR-----QPTTALMDRYVSHTIHCRSCSTAL 377
>gi|317970428|ref|ZP_07971818.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
CB0205]
Length = 432
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 182/428 (42%), Gaps = 57/428 (13%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQDRCPHRLAKLSEGQL- 181
W W+P+ +D+ + P T+ Q +VL+ D + E R D CPHRL LS+G+L
Sbjct: 6 WQNAWFPVAFLRDLDRNRPTPFTLVGQDLVLWFDRQADEWRAFADVCPHRLVPLSDGRLN 65
Query: 182 IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 241
G LEC YHGW F+G G+C PQ + I + R+Y +QG+++V+
Sbjct: 66 AAGELECPYHGWSFDGSGRCTLQPQAEPGSSISGRSHCRSYATACAQGLLFVFSGPSEQA 125
Query: 242 NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
LP G+ T +LP D LLEN++D +H+P +H T +RE+A P
Sbjct: 126 REQPLPLVPVLDEAGWVVQDTFRDLPMDALTLLENVLDASHVPFTHHAT--VGRRENAAP 183
Query: 302 LGFEVTERTDRGFAGQWG----REKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG 357
+ +T GF G W R K GS RF AP ++ ++ + G T
Sbjct: 184 VALALTGFDRDGFTGLWEEGPRRGKLGS--QHTRFLAPGLMWHDLTA----KGFARILTV 237
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPW----IKLFPDWYFHQSASKVFEQDMGFLSSQNEV 413
++ PT G+ LI RF +SPW ++L P W H V E D FL Q V
Sbjct: 238 VYAV-PTRPGECRLIARFPFQFSSPWPGRLLRLRPQWLQHIGNHTVLEDDQLFLHWQERV 296
Query: 414 LLKE--KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAP 471
+ + + T Y D +V W+++ G G P+ P P
Sbjct: 297 IERRGGRHDTLRQYHLPTQADLYVRALHDWVNRYG-GEPF---------PGQP------- 339
Query: 472 AGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALL 531
LP + + L R+ H HC+ C A + L +L
Sbjct: 340 ----------LPQR-----QNRQALMERFEAHTRHCRSCAGADRRL----KRLQPLCWIL 380
Query: 532 TALAILGA 539
ALA LGA
Sbjct: 381 VALAGLGA 388
>gi|78184439|ref|YP_376874.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9902]
gi|78168733|gb|ABB25830.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9902]
Length = 438
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 187/435 (42%), Gaps = 67/435 (15%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE---LRCHQDRCPHRLAKLSEGQ 180
WTE+W+P+ +D+ P T+ ++ +V++ D + E R D CPHRL LSEG+
Sbjct: 5 WTEQWWPIAYLQDLDRRQPNRFTLLERDLVIWWDAQAEQHSWRVFPDVCPHRLVPLSEGR 64
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAK--IPRSACVRTYEVKESQGVVWVWMSQ 237
+ D G LEC YHGW F+GEG C IPQ + K RS C + QG+++VW +
Sbjct: 65 INDEGLLECPYHGWSFDGEGHCRSIPQATDNTKPEARRSRCS-SLPTATGQGLLFVWTGE 123
Query: 238 KTPPNPDKLPWF----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS 293
N LP E+ QD T +LP D LLEN++D +H+P +H +T
Sbjct: 124 PDSANQHPLPLVPALEEDPTSWTLQD--TFRDLPMDAVTLLENVLDVSHVPFTHHKT--V 179
Query: 294 AKREDAQPLGFEVTERTDRGFAGQWG----REKDGSMPNFLRFEAPCVLQNNRESVDNKT 349
R +A P+ +T + GF W R K GS RF+AP ++ ++ +
Sbjct: 180 GNRNNASPVLATITREAEDGFDAFWEEGPRRGKLGSQTT--RFQAPQLMWHDLTA----K 233
Query: 350 GEKHYSTGLFLCRPTGQGKSMLIVR----FGTTGTSPWIKLFPDWYFHQSASKVFEQDMG 405
G T ++ P +G+ L R F + I L P W H KV E D
Sbjct: 234 GFARILTVVYAV-PIRRGECRLFARFPFQFQSAAPKLLIGLRPRWLQHIGNHKVLEDDQV 292
Query: 406 FLSSQNEVLLKE--KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
FL Q VL + +F D +VA +W++ G G P+
Sbjct: 293 FLHWQERVLERAGGSPAADRAFFMPNRADVYVAALHRWLNNNG-GEPF------------ 339
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT---W 520
SLP + +L +R++ H C+ C +A++ T W
Sbjct: 340 --------------AGESLPER-----RRTTDLMDRFYSHTQSCRSCSTALRRIRTARPW 380
Query: 521 KNSLSTAAALLTALA 535
++ AA L L
Sbjct: 381 AWAVLWGAAALVGLG 395
>gi|434388871|ref|YP_007099482.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019861|gb|AFY95955.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 480
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 213/493 (43%), Gaps = 75/493 (15%)
Query: 109 SEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDR 168
++E AD+ W +WYP+ + + + P + + +VL++DG + +C +D
Sbjct: 8 ADESEANNASSADFQWMPQWYPVAVVEFLDPSKPHAFQLLGKNVVLWRDGAQQWQCFEDA 67
Query: 169 CPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQ-----LPADAKIPRSACVRTY 222
CPHRLA LSEG++ DG L C YHGW+F G+G C KIPQ L A + +C +Y
Sbjct: 68 CPHRLAPLSEGRVEADGTLLCAYHGWRFGGDGNCTKIPQSQSPELEAQHRANPKSCAISY 127
Query: 223 EVKESQGVVWVWMS-------QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLE 275
+++QG++WVW + +P + E + + I +LPY +E
Sbjct: 128 PTQQAQGLLWVWAESGAKGAVESKNRSPRIISELEGKSDRVVKLFWNIRDLPYGWDYFME 187
Query: 276 NLMDPAHIPISH-----DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL 330
N+ DPAH+P+SH DR AK D P E++ T GF+ +E+ + + L
Sbjct: 188 NVADPAHVPVSHHGLVGDR-HRDAKYYD-MPRLREIS--TQEGFSFGVTQEQGSPILDVL 243
Query: 331 R-FEAPCVLQNNRESVDNKTGEKHYSTGLFL-------CRPTGQGKSMLIVRFGTTGTSP 382
F+ PC+++ D E L+ CR G + ++V+ P
Sbjct: 244 HDFQPPCLMKITTTFTD----EGQLILVLYATPTRPGWCRHIG---TQILVKNPQGKLPP 296
Query: 383 WIKLF----PDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEY 438
+ F P W H AS QDM FL Q + + +Y D +
Sbjct: 297 GLGFFALPMPTWLGHILASLFLHQDMVFLHYQERTMAAKDRWLDAVY-TPNPQDKMTITF 355
Query: 439 RKWMDK-AGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLA 497
R+W++K AG G+P+ T LP PA+ + L
Sbjct: 356 RQWLEKRAGGGVPW---QGTADLP---------------------PAE-----LDKRKLL 386
Query: 498 NRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAG 557
+ + H C+ C++A+K W + S A+ A+ ++ + R+ L + ++
Sbjct: 387 DVWHTHTAECQYCQTALKRLR-WARTGSYGLAI--AILVVAVLLESRSIALTGQTSLISL 443
Query: 558 VYACSTAISMNTT 570
+ +I++ T
Sbjct: 444 AFVARISIALGLT 456
>gi|352094528|ref|ZP_08955699.1| Pheophorbide a oxygenase [Synechococcus sp. WH 8016]
gi|351680868|gb|EHA64000.1| Pheophorbide a oxygenase [Synechococcus sp. WH 8016]
Length = 440
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 189/438 (43%), Gaps = 64/438 (14%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQLI 182
W+E+W+P+ +D+ P T+ +Q +VL+ D GE R +D CPHRL LSEG++
Sbjct: 5 WSEQWWPVAYVRDLDPTRPQRFTLLEQDLVLWWDAPGESWRAFKDVCPHRLVPLSEGRIN 64
Query: 183 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKT 239
G+LEC YHGW F+G+G C IPQL A A+ R+AC + QG+++VW +
Sbjct: 65 SAGQLECPYHGWSFDGQGSCRAIPQLGARARSESRRTAC-GSLPTAIGQGLLFVWSGTPS 123
Query: 240 PPNPDKLPWFENFARPG--------FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
+ LP G QD T +LP D LLEN++D +H+P +H RT
Sbjct: 124 AADSAALPLVPVLQEQGDGWANGWIVQD--TFRDLPMDALTLLENVLDVSHVPFTHHRT- 180
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKT 349
KRE+A P+ +T +GF W G K F AP ++ ++ +
Sbjct: 181 -VGKRENASPVEAVITREDSQGFEAFWQEGPRKGKLGSQNTHFRAPQLMWHDLTA----K 235
Query: 350 GEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDMG 405
G T ++ P +GK L RF S + L P W H KV E D
Sbjct: 236 GFARILTVVYAV-PISRGKCRLFARFPFQFKSALPRVLVGLRPRWLQHIGNHKVLEDDQV 294
Query: 406 FLSSQNEVL-LKEKVPTKELYFNLR-SIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
FL Q VL E F L+ S D +V +W++ G G P+
Sbjct: 295 FLHWQERVLETAGGSAAAEQAFVLKTSADVYVKALHRWVNGQGGG-PF------------ 341
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNS 523
LP + + L +RY H HC C A + + +
Sbjct: 342 --------------AGRPLPPRQDVEA-----LMDRYHSHTKHCASCSVAFRRIRSLRPW 382
Query: 524 LSTAAALLTALAILGAGR 541
L +L + ++GAG+
Sbjct: 383 L--WGSLWLSAVLIGAGQ 398
>gi|116075488|ref|ZP_01472748.1| cell death suppressor protein Lls1-like [Synechococcus sp. RS9916]
gi|116067685|gb|EAU73439.1| cell death suppressor protein Lls1-like [Synechococcus sp. RS9916]
Length = 436
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 188/435 (43%), Gaps = 66/435 (15%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSEGQLI 182
WTE+W+P+ +D+ P T+ ++ +V++ D L R D CPHRL LSEG++
Sbjct: 5 WTEQWWPVAYVRDLDQSKPTRFTLLERDLVIWWDPSAALWRAFPDVCPHRLVPLSEGRIN 64
Query: 183 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKT 239
+ G LEC YHGW F+GEG+C IPQ + RS C + +QG+++VW
Sbjct: 65 ERGELECPYHGWSFDGEGRCQHIPQAEEGTRSDSLRSRC-DSLPSATAQGLLFVWTGAPE 123
Query: 240 PPNPDKLPWFENFARPGFQD-------VSTIHELPYDHSILLENLMDPAHIPISHDRTDY 292
+PD LP P QD T +LP D LLEN++D +H+P +H RT
Sbjct: 124 AADPDSLPLV-----PQLQDNPESWTVQDTFRDLPMDALTLLENVLDVSHVPFTHHRT-- 176
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
+R +A P+ E+T GF+ W G + F F AP ++ ++ +D K G
Sbjct: 177 VGRRSNAAPVRAEITREDRGGFSAVWEEGPRRGSLGSQFTTFRAPQLMWHD---LDAK-G 232
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWYFHQSASKVFEQDMGF 406
T ++ P +G+ L RF SP +L P W H KV E D F
Sbjct: 233 FARILTVVYAV-PIRRGECRLFARFPFQFRSPAPRLLLGLRPRWLQHIGNHKVLEDDQVF 291
Query: 407 LSSQNEVLLKEKVPT---KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
L Q + + Y ++ D +V +W+ G G P+
Sbjct: 292 LHWQERLFAAAGGGAAIDRAFYLPCQA-DVYVKALYRWVQSNG-GEPF------------ 337
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNS 523
V LP + + AP L +R+ H HC+ C +A++ +
Sbjct: 338 --------------VGQPLPPRQEL----AP-LMDRFHSHTRHCRSCSTALRRLQALRPW 378
Query: 524 LSTAAALLTALAILG 538
L + L L LG
Sbjct: 379 LWGSLWLSAVLVGLG 393
>gi|87303595|ref|ZP_01086374.1| cell death suppressor protein Lls1-like [Synechococcus sp. WH 5701]
gi|87281819|gb|EAQ73783.1| cell death suppressor protein Lls1-like [Synechococcus sp. WH 5701]
Length = 457
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 183/456 (40%), Gaps = 85/456 (18%)
Query: 91 SSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQ 150
S SA P+P GPA W WYP+ +D+ P G T+
Sbjct: 3 SVSAEPSPAVSSSACGPA---------------WRNAWYPVAFLRDLDPARPTGFTLLGD 47
Query: 151 QIVLYKDGKG-------ELRCHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCV 202
+VL+ D KG + R D CPHRL LSEG+L G LEC YHGW F+G+G+C
Sbjct: 48 DLVLWFDRKGDAAQPGGQWRAFADVCPHRLVPLSEGRLNAAGELECPYHGWTFDGQGRCT 107
Query: 203 KIPQL-----PADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENF--ARP 255
IPQ P+D RS+C R Y QG+++V+ LP
Sbjct: 108 AIPQASEGSQPSDR---RSSC-RAYATASGQGMLFVFAGAPEAAAAVPLPLVPVLEETEA 163
Query: 256 GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFA 315
G+ T +LPYD LLEN++D +H+P +H T +RE A P+ + + GF+
Sbjct: 164 GWLVQDTFRDLPYDALTLLENVLDVSHVPFTHHAT--VGRRETAGPVDLRLEQAGPGGFS 221
Query: 316 GQWG----REKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSML 371
G W R K GS F F AP ++ ++ + G T ++ PT G+ L
Sbjct: 222 GVWEEGPRRGKLGS--QFTTFLAPGLMWHDLTA----RGFARILTVVY-ATPTRPGECRL 274
Query: 372 IVRFGTTGTSPW----IKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKE--KVPTKELY 425
RF S W ++L P W H V E D FL Q VL
Sbjct: 275 FARFPFQFESSWPGRLLRLRPQWLQHIGNHTVLEDDQIFLHWQERVLEARGGSAALSRAC 334
Query: 426 FNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
D +V R W+ + G G P+ P P LP +
Sbjct: 335 HLATGADAYVKALRDWVVR-GAGEPF---------PDQP-----------------LPPR 367
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWK 521
G L RY H HC+ C A++ W+
Sbjct: 368 LGRRA-----LVERYESHTRHCRSCSGALRQIRRWR 398
>gi|16330378|ref|NP_441106.1| hypothetical protein slr1747 [Synechocystis sp. PCC 6803]
gi|383322119|ref|YP_005382972.1| hypothetical protein SYNGTI_1210 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325288|ref|YP_005386141.1| hypothetical protein SYNPCCP_1209 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491172|ref|YP_005408848.1| hypothetical protein SYNPCCN_1209 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436439|ref|YP_005651163.1| hypothetical protein SYNGTS_1210 [Synechocystis sp. PCC 6803]
gi|451814536|ref|YP_007450988.1| hypothetical protein MYO_112210 [Synechocystis sp. PCC 6803]
gi|1652868|dbj|BAA17786.1| slr1747 [Synechocystis sp. PCC 6803]
gi|339273471|dbj|BAK49958.1| hypothetical protein SYNGTS_1210 [Synechocystis sp. PCC 6803]
gi|359271438|dbj|BAL28957.1| hypothetical protein SYNGTI_1210 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274608|dbj|BAL32126.1| hypothetical protein SYNPCCN_1209 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277778|dbj|BAL35295.1| hypothetical protein SYNPCCP_1209 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958298|dbj|BAM51538.1| hypothetical protein BEST7613_2607 [Synechocystis sp. PCC 6803]
gi|451780505|gb|AGF51474.1| hypothetical protein MYO_112210 [Synechocystis sp. PCC 6803]
Length = 469
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 205/466 (43%), Gaps = 70/466 (15%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSE 178
+ +D WYPL +D+ P T+ + +V++ + + R + D+CPHRLA LSE
Sbjct: 26 SKFDCRAVWYPLAYEEDLDKRKPTRFTLLGEDLVIWWEANSQQWRVYADQCPHRLAPLSE 85
Query: 179 GQLID-GRLECLYHGWQFEGEGKCVKIPQ--LPADAKIPRSACVRTYEVKESQGVVWVWM 235
G++ G+LEC YHGW F G G+C IPQ A + ACVR+ + +QG+++ +
Sbjct: 86 GRINKAGQLECPYHGWTFAGSGQCQAIPQQHTGGQAHTSKRACVRSLPTQVAQGLLFAFP 145
Query: 236 SQKTPPNPDKLPWFE--NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS 293
+ LP + + + + ++T +LPYD L+EN++D +HIP +H +T
Sbjct: 146 GETDQAEKVALPLVDVLDGDQSEWVCLNTFRDLPYDAFTLMENVLDSSHIPYTHHKT--V 203
Query: 294 AKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD-NKTG 350
KR + P+ E+ +GF G W G K F AP ++ ++ S +T
Sbjct: 204 GKRSNVSPVDLEIIHGDRQGFTGIWEEGPRKGTLGKQTTTFIAPGLMWHDLTSKQFGRTL 263
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWYFHQSASKVFEQDMGF 406
Y+T P G+ L RF S + +L P WY H ++V E D F
Sbjct: 264 TVVYAT------PIRPGECRLFARFPFKFPSKFPRLVIGFTPRWYSHLGQNRVLEDDQIF 317
Query: 407 LSSQNE-VLLKEKVPT--KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKV 463
L Q V K P K+ Y ++ D +VAE+ +W+++
Sbjct: 318 LHFQERFVQGKGGSPNYEKDCYLPTKA-DLFVAEFHRWIEQ------------------- 357
Query: 464 PAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNS 523
+ P G + LP + + L +RY H HC CR+A+ N K
Sbjct: 358 ---YQVKPFG-----DSPLPDRQSV-----EQLMDRYHSHTEHCHSCRNALA--NIEKIQ 402
Query: 524 LSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNT 569
+ A + L CL ASL LA +A +++ T
Sbjct: 403 TGSLAIAIICLV-----------CLPVASLGLAPNFALGLGLTVLT 437
>gi|126654793|ref|ZP_01726327.1| hypothetical protein CY0110_10167 [Cyanothece sp. CCY0110]
gi|126623528|gb|EAZ94232.1| hypothetical protein CY0110_10167 [Cyanothece sp. CCY0110]
Length = 443
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 195/449 (43%), Gaps = 88/449 (19%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLS 177
++++++ WYPL +D+ ++P +T+ ++V++K + D+CPHRLA LS
Sbjct: 2 ISEFNFFHHWYPLIPIEDIDSNSPTPVTLLGLRLVIWKPRSSTYYQVFLDQCPHRLAPLS 61
Query: 178 EGQLIDG--RLECLYHGWQFEGEGKCVKIPQLPADAKIPRS----ACVRTYEVKESQGVV 231
EG++ + L C YHGW+F+ G C IPQ + ++ ACV ++ ++ G++
Sbjct: 62 EGRIDENSDNLMCSYHGWEFDQNGICTSIPQTENTKILTKNKQQFACV-SFPSRQINGLL 120
Query: 232 WVW-------MSQKTP----PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 280
WVW ++ KTP P D A GF S + ++ YD L+EN+ DP
Sbjct: 121 WVWPDKNSQDLANKTPLPLSPQID--------ADKGFIWSSYVRDMAYDWQTLVENVADP 172
Query: 281 AHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN 340
+H+P +H R + QP+ E+ + T + R + + + FE PC L+
Sbjct: 173 SHVPYAHHGV--QGNRNNGQPIPIEIVKSTPNVIEAKIERALNST----ITFEPPCRLE- 225
Query: 341 NRESVDNKTGEKHYSTGLFL-CRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASK- 398
K G+ + GL + C P GKS L+ +F +K+ P W+ H +
Sbjct: 226 ----YAIKIGDSNKQVGLVVYCVPVAPGKSRLVGQFPRNFAKSLMKIIPRWWEHLTTRHL 281
Query: 399 VFEQDMGFLSSQNEVLLKEKVPT---KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGH 455
V E DM L Q E L+EK T K Y D V E+R+W D G
Sbjct: 282 VLEGDM-ILLQQQEYYLQEKQETQSWKTAYQLPTEADRLVIEFRRWFDTYCQG------- 333
Query: 456 STISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAP------NLANRYFRHVIHCKG 509
K+P + GI H + +RY +H HC
Sbjct: 334 ------KLPW------------------EQVGINDTHLTINDNRHEVLDRYHQHTQHCSS 369
Query: 510 CRSAVKAFNTWKNSLSTAAALLTALAILG 538
CR+A+ N++ +L LAI
Sbjct: 370 CRNAL-------NNVKKLQFILLILAIFS 391
>gi|428224503|ref|YP_007108600.1| Pheophorbide a oxygenase [Geitlerinema sp. PCC 7407]
gi|427984404|gb|AFY65548.1| Pheophorbide a oxygenase [Geitlerinema sp. PCC 7407]
Length = 440
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 198/460 (43%), Gaps = 66/460 (14%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLSEGQ 180
+D+ + WYP+ +D+ + P + V ++IV++K R D+CPHRLA LSEG+
Sbjct: 6 FDFLQHWYPVSPLEDLDPECPTPVVVLGKRIVIWKPRFSDHYRAFLDQCPHRLAPLSEGR 65
Query: 181 LID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVWM 235
+ + G L C YHGWQF+ +G C +IPQ + ++ CV ++ G++WVW
Sbjct: 66 VDEKTGHLMCSYHGWQFDEQGTCTQIPQAEDSELVAKNRDRYCVTALPMQAVNGLLWVW- 124
Query: 236 SQKTPPNPDKLPWFENFARP---------GFQDVSTIHELPYDHSILLENLMDPAHIPIS 286
P+PD A P F S + +L YD L+ENL DP+H+P +
Sbjct: 125 -----PDPDSAHLASAQALPLSPYWNAGSEFVWASIVRDLEYDWQTLVENLADPSHVPFA 179
Query: 287 HDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVD 346
H +RE AQP ++ E T + +GS + F PC L E
Sbjct: 180 HHGV--QGRRERAQPTPIKIVESTQDRIEAK----SEGSFTTKITFTPPCHL----EYAI 229
Query: 347 NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSA-SKVFEQDMG 405
+ G++ + C P GKS ++ +F ++ P W+ H S + + + DM
Sbjct: 230 SLGGDRQVGLVTY-CVPVAPGKSRIVAQFSRNFAKRLHQITPRWWDHISVRNSILDGDMI 288
Query: 406 FLSSQNEVLLKEKVPT---KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPK 462
L Q E L+++ T K Y S D V E+R+W+D+ G K
Sbjct: 289 LLHYQ-EKELQQRSQTEDWKTAYKMPTSADRLVIEFRRWIDQYCQG-------------K 334
Query: 463 VPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKN 522
+P L + +L +RY +H + C CR A+K + +
Sbjct: 335 LPW--------------GELENDQKMPLGDRQHLLDRYHQHTLICSSCRRALKNLHRLQI 380
Query: 523 SLST--AAALLTALAILGAGRQWRAFCLVSASLCLAGVYA 560
L AL A + R + + LV +L ++A
Sbjct: 381 GLLAYFGVALSAAALVPDRFRFFLSLPLVLTALLGLAIWA 420
>gi|428297609|ref|YP_007135915.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
gi|428234153|gb|AFY99942.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
Length = 444
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 191/431 (44%), Gaps = 49/431 (11%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEG 179
++++ ++WYPL +D+ D P+ + V +V++K E + D CPHRLA LSEG
Sbjct: 4 NFNFFQQWYPLSPVEDLEKDRPIPVKVLGINLVIWKPLSSETFQVFLDECPHRLAPLSEG 63
Query: 180 QLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVW 234
++ D G L C YHGWQF+ +G C IPQ I ++ CV ++ V+E Q ++WVW
Sbjct: 64 RIDDQTGNLMCSYHGWQFDSQGSCTHIPQAEKAEIIAKNQDNFCVTSFPVREEQDLLWVW 123
Query: 235 MSQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
+ + KLP A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 124 LDLNSVDIAATTKLPLSPLVDASKGFVWSSFVRDLEYDWQTLVENVADPSHVPFAHHGV- 182
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGE 351
R+ A+P+ +V + + + S+P + FE PC L E GE
Sbjct: 183 -QGNRDKAKPILMQVKDSQADIIEVE--TVGNFSVPTKITFEPPCRL----EYAIQFGGE 235
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDM-GFLSS 409
+ C P GKS L+ +F KL P W+ H + + V + DM
Sbjct: 236 DKQMGLVTYCIPISPGKSRLVAQFPRNFAKRAHKLTPRWWDHINNRNLVIDGDMILLRQQ 295
Query: 410 QNEVLLKEKVPTKELYFNL-RSIDTWVAEYRKWMDK-AGHGMPYYFGHSTISLPKVPAVV 467
+ + ++ + + + L D V EYR W D+ G +P+ KV
Sbjct: 296 EQLLQQHQRTESWKTAYKLPTGADRLVIEYRNWFDRYCGGKLPW---------EKV---- 342
Query: 468 EHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTA 527
G++ +P T +RY +H HC CR A+K + L
Sbjct: 343 ---------GLNGEIPQT----TQSRQETLDRYTQHTQHCSSCRGALKNIQNIQKFL--L 387
Query: 528 AALLTALAILG 538
++A++G
Sbjct: 388 GYFTISVAVVG 398
>gi|158333261|ref|YP_001514433.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
gi|158303502|gb|ABW25119.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
Length = 467
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 190/444 (42%), Gaps = 72/444 (16%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSEGQ 180
+DW E WYP+ KD+ + T+ D+ +V++ D R D+CPHRLA+LSEG+
Sbjct: 23 FDWQEVWYPIAYVKDLDKEKLTTFTLLDRDLVIWWDHNANTWRVFADQCPHRLARLSEGR 82
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 237
+ DG +EC YHGW F G G+C +IPQ + S ACV + + QG+++ + Q
Sbjct: 83 IDEDGLIECPYHGWAFSGTGECERIPQQVSGRSAESSPRACVDSLPISIQQGLLFAYAGQ 142
Query: 238 ----KTPPNPDKLPWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
P P P E+ GF+D LPYD LLEN++DP+H+P +H R
Sbjct: 143 PERAALTPVPIVGPIEESPDDWIILDGFRD------LPYDVLTLLENVLDPSHLPYTHHR 196
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD- 346
+ R +A P+ EV E +GF G W G + F AP ++ ++ S
Sbjct: 197 S--VGNRSNAGPVELEVMESGKQGFYGVWEEGPRQGKLGTQTTTFVAPGLMWHDLTSSQF 254
Query: 347 NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTS---PW-IKLFPDWYFHQSASKVFEQ 402
+T Y+T P +G+ + RF +S W I P W+ H + + E
Sbjct: 255 GRTLTVVYAT------PVRKGECRIFARFPFQFSSKVPAWMISHTPTWFSHLGQNAILED 308
Query: 403 DMGFLSSQNEVLLK---EKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTIS 459
D FL Q L + K + Y R+ D +V +W ++ P+
Sbjct: 309 DQIFLHFQERYLERTKDSKSIAQAFYLPTRA-DRFVLALHQWQERF-QADPF-------- 358
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT 519
SLP + L +RY+ H ++C C A+K
Sbjct: 359 ------------------PGQSLPPE-----RTREQLLDRYYSHTVNCASCSQALKNVKR 395
Query: 520 WKN---SLSTAAALLTALAILGAG 540
+ L+ A LT L G G
Sbjct: 396 LRKVMVGLALVAWTLTPLLAFGFG 419
>gi|427728395|ref|YP_007074632.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
gi|427364314|gb|AFY47035.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
Length = 495
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 172/384 (44%), Gaps = 56/384 (14%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRC 169
+E+ + E + + WT++WYP+ + + + P G+ + Q IVL++DG G+ RC +D C
Sbjct: 17 DEQLQTEAEI--FSWTKQWYPVAVVEFLDPARPHGMQLLGQDIVLWRDGTGKWRCFEDFC 74
Query: 170 PHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPAD------AKIPRSACVRTY 222
PHRLA LSEG++ DG L C YH W+F+ +GKCV IPQ + + P+S C Y
Sbjct: 75 PHRLAPLSEGRVESDGTLLCAYHAWRFDAQGKCVSIPQSQDEQTAAHHCENPKS-CAVVY 133
Query: 223 EVKESQGVVWVWMS-------QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLE 275
+E QG++WVW + P + E+ + + +LPY +E
Sbjct: 134 PTQECQGLLWVWAESGEQAQIESQLRTPRLIAELEDSSGKVEKSPWNFRDLPYGWDYFME 193
Query: 276 NLMDPAHIPISH-----DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL 330
N+ DPAH+P+SH DR AK D P+ T+ GFA
Sbjct: 194 NVADPAHVPVSHHGIVGDRYK-DAKYYDMIPVR---KMSTEEGFAFALQPTTGNIEQAVH 249
Query: 331 RFEAPCVLQNNRESVDNKTGE----------------KHYSTGLFLCRPTGQGKSMLIVR 374
F+ PC + R + K G +H +F+ G+ K +
Sbjct: 250 DFQPPCYM---RIATTTKDGGQLILALYATPTRPGWCRHIGCQVFVKNSQGK-KPQGLSF 305
Query: 375 FGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLL-KEKVPTKELYFNLRSIDT 433
FG P W H AS QDM FL Q + + + K + F D
Sbjct: 306 FGLP--------LPTWLIHVLASLFLHQDMVFLHYQEKTIAQRRKGKWLDAVFTPNPQDK 357
Query: 434 WVAEYRKWMDK-AGHGMPYYFGHS 456
V R+W++K AG G+P+ G+S
Sbjct: 358 MVITLRQWLEKRAGGGIPWAEGYS 381
>gi|224057008|ref|XP_002299110.1| predicted protein [Populus trichocarpa]
gi|222846368|gb|EEE83915.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 187/482 (38%), Gaps = 123/482 (25%)
Query: 105 VGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELR 163
+GP E E E + +DW +WYPL D+ P V +V++ D + E +
Sbjct: 69 IGPP-EPEVEVETKREKFDWYAQWYPLMPVCDLDKRVPHAKKVLGLDVVVWWDRNESEWK 127
Query: 164 CHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACV 219
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV
Sbjct: 128 VFDDTCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKKACV 187
Query: 220 RTYEVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYD 269
Y +VW W PN D + P+ P + ++ Y
Sbjct: 188 AAYPSTLHHDIVWFW------PNTDPQYKDIILKKQPPFIPELEDPSYTRTMGNRDIAYG 241
Query: 270 HSILLENLMDPAHIPISH------DRTDYSAKREDAQPLGFEVTERTDRGFAG--QWGRE 321
+ +L+ENLMDPAH+P +H RE +P+ V + GF G +WG
Sbjct: 242 YDVLVENLMDPAHVPYAHYGIMRTQTPKVKVDREGGRPVALSVKKLDINGFDGDQEWGIS 301
Query: 322 KDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTS 381
K F APC+ + ++N+ G G + + GT
Sbjct: 302 K---------FIAPCIFYAYTKPLENQ----------------GNGAA------SSAGTR 330
Query: 382 PWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKW 441
K+ D G + Q VPTK D V +R+W
Sbjct: 331 KERKIM---------------DAGPANWQKACF----VPTKS--------DALVVGFRRW 363
Query: 442 MDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYF 501
++K G + G + +LP P + L +RY+
Sbjct: 364 LNKYAGGEVDWKGKYSGALPPTPPREQ---------------------------LMDRYW 396
Query: 502 RHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQ------WRAFCLVSASLCL 555
HV++C+ C +A K N + L A+ L + I+ A +Q R + A +C
Sbjct: 397 SHVVNCRSCNAAHKGLNALEVVLQVAS--LAFVGIVAATKQNVMSLAARNTMIAMAVVCF 454
Query: 556 AG 557
AG
Sbjct: 455 AG 456
>gi|308811733|ref|XP_003083174.1| slr1747 (ISS) [Ostreococcus tauri]
gi|116055053|emb|CAL57449.1| slr1747 (ISS), partial [Ostreococcus tauri]
Length = 405
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 167/380 (43%), Gaps = 66/380 (17%)
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVWVW--M 235
G LEC YHGW F GEGKC IPQ+ A K PR ACV Y E QG++WV+
Sbjct: 5 GELECGYHGWTFTGEGKCTSIPQIEPGAGLETALKSPR-ACVAAYPCVEKQGMLWVYPTA 63
Query: 236 SQKTPPNPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS 293
K P +LP P +QDV +LP D + LLEN+MD +H+P +H +
Sbjct: 64 KDKAPATLPELPLIPEIDDPDCVYQDV--FRDLPMDWATLLENVMDVSHVPFTHHNS--V 119
Query: 294 AKREDAQPLGFEVTER---TDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNK 348
KRE+A P+ E+T + GF G W G K + F+AP ++++ +
Sbjct: 120 GKRENATPVNLELTSADGVSASGFQGMWQEGPRKGKYGSQYTEFKAPTLMRHTLRT---- 175
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDWYFHQSASKVFEQDM 404
E + + PT G+ L+ RF S + L+P W+ H + + + E D
Sbjct: 176 --EAFTTLTVVYAVPTTPGRCRLLARFPFIFKSALPRFFFGLYPQWFSHTNQNSILEDDQ 233
Query: 405 GFLSSQNEVL-----LKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTIS 459
FL Q ++ +K K + Y ++ D +V+ +RKW+ + G P + +
Sbjct: 234 IFLHKQERLIEVDQKIKGKSYAQSCYMPTKA-DVYVSAFRKWITEIAGGGPAWPLGMPTN 292
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT 519
LP E L +RY+ H ++CK C +A+
Sbjct: 293 LPPQETTRE--------------------------ALLDRYYSHTVNCKSCATALANIGK 326
Query: 520 WKNSLSTAAALLTALAILGA 539
+ L +LT +A+ GA
Sbjct: 327 VRKVLR----VLTFVALAGA 342
>gi|218245636|ref|YP_002371007.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166114|gb|ACK64851.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 497
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 201/470 (42%), Gaps = 68/470 (14%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
A + WT++WYP+ + + + P + + +++VL++D + RC +DRCPHRL LSEG
Sbjct: 22 ATFQWTKQWYPIAVIEFLDPSRPHPVQLLGKELVLWRDRNNQWRCFEDRCPHRLVPLSEG 81
Query: 180 QL-IDGRLECLYHGWQFEGEGKCVKIPQLP------ADAKIPRSACVRTYEVKESQGVVW 232
++ DG L C YH W+F+ GKCV IPQ PRS C Y +E QG++W
Sbjct: 82 RVEADGTLLCAYHAWRFDETGKCVSIPQSKDKDTENQHLNNPRS-CAIAYPTQEQQGLLW 140
Query: 233 VW-------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 285
VW + P +P E + + + ++P+ +EN+ DPAH+P+
Sbjct: 141 VWPESGDQAEQESQSRKPRLIPELEEKSDKVVKLFWYVRDMPFGWDYFMENVCDPAHVPV 200
Query: 286 SHDRTDYSAKREDAQPLGFEVTER---TDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNR 342
SH ++ +DA+ + ER T GFA F+ PC++ +
Sbjct: 201 SHHGM-MGSRYKDAKYYNM-IREREISTQNGFAFSLEPVAPTIEKAVHDFQPPCLM---K 255
Query: 343 ESVDNKTGEKHYSTGLFL-------CRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWY 391
S K G K + L++ CR G ++V+ T + F P W
Sbjct: 256 ISSSFKDGAK-FILALYVSPTRPGWCRHIG---CQILVKSNEGKTPKGLAFFALPMPTWL 311
Query: 392 FHQSASKVFEQDMGFLSSQNEVLLKEKVPT-KELYFNLRSIDTWVAEYRKWMDK-AGHGM 449
H AS QD+ FL Q +++ ++ + D V RKW++K AG G+
Sbjct: 312 GHILASSFLHQDLVFLHYQEKIIARQGTQNWLSAVYTPNPQDKMVITLRKWLEKRAGGGI 371
Query: 450 PYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKG 509
P+ G + P++P P + L + + H HC+
Sbjct: 372 PWAEGTN----PELPP-----------------PQRD------KQQLFDVWSTHTQHCRV 404
Query: 510 CRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVY 559
C+ A+K N + A + A++ R A L S SL G +
Sbjct: 405 CQDALKNINRTRLFAYIGAGVCLLFAVILDARM-VAMTLGSQSLKEVGSW 453
>gi|427702133|ref|YP_007045355.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427345301|gb|AFY28014.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 435
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 179/428 (41%), Gaps = 59/428 (13%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSEGQL- 181
W + W+P+ +D+ P T+ D+ +VL+ D G+L R D CPHRL LS+G++
Sbjct: 6 WRQHWFPVAYLRDLDPARPTAFTLLDEDLVLWWDRAGQLWRAFADVCPHRLVPLSQGRIN 65
Query: 182 IDGRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
G LEC YHGW F G+G C IPQ A RS C R Y E+QG+++V+ ++
Sbjct: 66 AGGELECPYHGWSFAGDGHCTAIPQAEPGASPSAVRSRC-RAYATAEAQGLLFVFAGEEA 124
Query: 240 PPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDA 299
LP PG+ T +LP D LLEN++D +H+P +H RT KRE+A
Sbjct: 125 DAAAVPLPLVPVLEEPGWFVQDTFRDLPMDALTLLENVLDVSHVPFTHHRT--VGKRENA 182
Query: 300 QPLGFEVTERTDRGFAGQWG----REKDGSMPNFLRFEAPCVLQNNRESVD-NKTGEKHY 354
P+ +T GF W R K GS + AP ++ ++ + + Y
Sbjct: 183 APVVATITSSGPEGFTALWEEGPRRGKLGSQST--TYAAPGLMWHDLTAPSFARILTVVY 240
Query: 355 STGLFLCRPTGQGKSMLIVR----FGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
+T P +G+ L R F + + L P W H + V E D FL Q
Sbjct: 241 AT------PIRRGECRLFARFPFQFESRLPPLLLGLRPRWLQHIANHTVLEDDQVFLHWQ 294
Query: 411 NEVLLKEKVP--TKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVE 468
VL + + +F D +V W++ H P P
Sbjct: 295 ERVLEQRGRSGGAERAFFLATGADVYVKALHDWVN----------AHDGDPFPGQP---- 340
Query: 469 HAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAA 528
LP + L +R+ H HC CR A++ W+ L A
Sbjct: 341 -------------LPPR-----FDRAALMDRWESHGRHCASCRGALEGLRRWR-PLVQAI 381
Query: 529 ALLTALAI 536
L LAI
Sbjct: 382 PWLALLAI 389
>gi|359462313|ref|ZP_09250876.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 488
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 188/444 (42%), Gaps = 72/444 (16%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSEGQ 180
+DW E WYP+ KD+ + T+ D+ +V++ D R D+CPHRLA+LSEG+
Sbjct: 44 FDWQEVWYPIAYVKDLDKEKLTTFTLLDRDLVIWWDHNANTWRVFADQCPHRLARLSEGR 103
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 237
+ DG +EC YHGW F G G C +IPQ + S ACV + + QG+++ + Q
Sbjct: 104 IDEDGLIECPYHGWAFSGTGDCERIPQQVSGRSAESSPRACVDSLPISIQQGLLFAYAGQ 163
Query: 238 ----KTPPNPDKLPWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
P P P E+ GF+D LPYD LLEN++DP+H+P +H R
Sbjct: 164 PERAALTPVPIVGPIEESPDDWIILDGFRD------LPYDVLTLLENVLDPSHLPYTHHR 217
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVD- 346
+ R +A P+ EV E +GF G W G + F AP ++ ++ S
Sbjct: 218 S--VGNRSNAGPVELEVMESGKQGFYGVWEEGPRQGKLGTQTTTFVAPGLMWHDLTSSQF 275
Query: 347 NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTS---PW-IKLFPDWYFHQSASKVFEQ 402
+T Y+T P +G+ + RF +S W I P W+ H + + E
Sbjct: 276 GRTLTVVYAT------PVRKGECRIFARFPFQFSSKVPAWMISHTPTWFSHLGQNAILED 329
Query: 403 DMGFLSSQNEVLLK---EKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTIS 459
D FL Q L + K + Y R+ D +V +W ++ P+
Sbjct: 330 DQIFLHFQERYLERTKDSKSIAQAFYLPTRA-DRFVLALHQWQERF-QADPF-------- 379
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT 519
SLP + L +RY H ++C C A+K
Sbjct: 380 ------------------PGQSLPPE-----RTREQLLDRYHSHTVNCASCSQALKNVKR 416
Query: 520 WKN---SLSTAAALLTALAILGAG 540
+ L+ A LT L G G
Sbjct: 417 LRKVMVGLALVAWTLTPLLAFGFG 440
>gi|30103015|gb|AAP21428.1| putative cell death suppressor protein [Oryza sativa Japonica
Group]
Length = 511
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 171/425 (40%), Gaps = 72/425 (16%)
Query: 147 VFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIP 205
V +V + DG GE R D CPHRLA LSEG++ GRL+C YHGW F+G G C IP
Sbjct: 2 VMGLSVVAWLDGGGEWRVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIP 61
Query: 206 QLPA---DAKIPRSACVRTYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENF 252
Q PA ACV +Y ++W + + +K PP ++ +
Sbjct: 62 QAPALGPPVHKNSKACVASYPSVVQNNILWFYPRSEPEYCDVLKRKRPPYVPEI----DD 117
Query: 253 ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDR 312
P V + +L Y + +L+ENLMDPAH+P +H E P+ + E +
Sbjct: 118 DDPSHFMVYGVRDLLYGYELLVENLMDPAHVPYAHKGLFVEFDLEHGSPMKMRIEEASID 177
Query: 313 GF----AGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG-------LFLC 361
GF G WG + +F APC L D + E +
Sbjct: 178 GFHSNLDGDWG---------YFKFVAPCTLYGTPFRTDLEADEVKKKKKKKPEVRVVLFT 228
Query: 362 RPTGQGKSMLI--VRFGTTGTSPWI-KLFPDWYFHQSASKVFEQDMGF-LSSQNEVLLKE 417
P G+S I R+ G W+ K+ P W++H +++ + + D + +N +
Sbjct: 229 VPVAPGRSRFIWASRYKVGG---WLDKILPRWFYHMTSNTILDSDTYLHVEDRNITTVGL 285
Query: 418 KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAG 477
K Y S D V YR W K Y H P V + P
Sbjct: 286 DNWHKACYVPTSS-DNLVIAYRNWFRK-------YCNHQIGWANPNPTVKQQLPQ----- 332
Query: 478 VSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAIL 537
T L RY+ HV+ C CR+A+K + +L AA + + L
Sbjct: 333 ------------TPTRDQLLERYWSHVMQCTSCRAALKGMRALEITLQVAA--VAVVGFL 378
Query: 538 GAGRQ 542
AG++
Sbjct: 379 AAGKE 383
>gi|170079201|ref|YP_001735839.1| Rieske iron-sulfur protein [Synechococcus sp. PCC 7002]
gi|169886870|gb|ACB00584.1| probable Rieske iron-sulfur protein [Synechococcus sp. PCC 7002]
Length = 452
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 186/453 (41%), Gaps = 55/453 (12%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQ 180
+DW E WYP++ +D+ P + + +V++ K + + D CPHRLA LSEG+
Sbjct: 17 FDWHEAWYPIHFVQDLDKTKPTRFVLLGEPLVIWWQPKTQQWQVFSDVCPHRLAPLSEGR 76
Query: 181 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQK 238
++DG LEC YHGWQF G C KIP D + S A V+TY QG+++V+ +
Sbjct: 77 IVDGCLECPYHGWQFAETGACTKIPFQAPDGEAHHSPRAQVKTYASCVKQGLLFVYGGDR 136
Query: 239 TPPNPDKLPWFENFAR-PG-FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKR 296
+P + PG + ++PYD + LLEN++D +H+ +H R
Sbjct: 137 HEAAQTPIPTVPQLDQHPGEWVMADVFRDIPYDATTLLENVLDTSHVAFTHH--PRVGNR 194
Query: 297 EDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNR-ESVDNKTGEKH 353
++A+ +V+E GF G W G + F AP + ++ ES +
Sbjct: 195 KNAKEFILDVSEVEKTGFTGNWEEGPRRGTLGSQKTTFFAPAAMWHDIPESPFGQVMTVV 254
Query: 354 YSTGLFLCRPTGQGKSMLIVR--FGTTGTSPWI--KLFPDWYFHQSASKVFEQDMGFLSS 409
Y+T PT +G+ IVR F P + K P W+ H + + E D FL
Sbjct: 255 YAT------PTEKGRCRAIVRLPFRFKAAIPRLAFKFTPRWFSHLNQMGILEDDQIFLHL 308
Query: 410 QNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEH 469
Q L K + + S D +V YR+W+++ G P
Sbjct: 309 QERELAKSTQNYAKTCYLPTSSDLFVLAYRQWVERYGEPFP------------------- 349
Query: 470 APAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSL---ST 526
S + P + L RY H +C C A+ K +
Sbjct: 350 -----DEDFSPAEPQQS--------QLLERYHSHTKNCASCTQALHRIQKGKKGVIGLGF 396
Query: 527 AAALLTALAILGAGRQWRAFCLVSASLCLAGVY 559
L AI W + + + LAG++
Sbjct: 397 LLWLGLPFAIFSGLPTWSLGAIATVIIVLAGLW 429
>gi|159480512|ref|XP_001698326.1| pheophorbide A oxygenase [Chlamydomonas reinhardtii]
gi|158282066|gb|EDP07819.1| pheophorbide A oxygenase [Chlamydomonas reinhardtii]
Length = 365
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 153/335 (45%), Gaps = 24/335 (7%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQLI 182
W + WYP+ TKD+ P +T+ +V++ D R +D CPHRL LSEG++
Sbjct: 2 WFDSWYPVAFTKDLDPAKPHRVTLLGIPMVVWWDKNAAAWRVFEDVCPHRLVPLSEGRIT 61
Query: 183 -DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 241
G LEC YHGW F G+GKC IPQ+ AC Y QG+++V
Sbjct: 62 PSGLLECGYHGWAFSGDGKCEVIPQVSQGKCDTPRACATGYHCAVRQGLLFVGAGSGGGA 121
Query: 242 NPDKLPWFENFARPGFQDVS--TIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDA 299
++P PG + +S +LPYD S L+EN++D +H+P +H +++
Sbjct: 122 EEARIPLVSELEEPGGKWLSQDVWRDLPYDWSTLMENVLDSSHVPFTH----HASMSNRN 177
Query: 300 QPLGFEVTER-TDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYST 356
P ++T TD GF+G W G P F APC L++ +S + S
Sbjct: 178 GPYDLKLTSAITDAGFSGMWTTGPRAGKLGPQSTTFTAPCFLKHRLDS------KGFASL 231
Query: 357 GLFLCRPTGQGKSMLI----VRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNE 412
+ P G+ LI +RF L P W++H S+ + E D FL E
Sbjct: 232 TVVYAVPMEPGRCRLINRNVLRFNNAIPEAIFGLVPSWWWHVSSHVLLEDDQIFLHLGEE 291
Query: 413 VLLKEK---VPTKELYFNLRSIDTWVAEYRKWMDK 444
+ + + ++ + DT+V +++W+ +
Sbjct: 292 ETARRRAGGLGHSQVCYMPSQADTYVIAFQRWLSR 326
>gi|427724861|ref|YP_007072138.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
gi|427356581|gb|AFY39304.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
Length = 451
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 185/432 (42%), Gaps = 62/432 (14%)
Query: 116 ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY-KDGKGELRCHQDRCPHRLA 174
E +DW E WYP++ +D+ P + ++ +V++ + + D CPHRLA
Sbjct: 11 EVSTEKFDWLEAWYPVHFVQDLSKTEPTRFVLLEKPLVIWWHEESQQWNVFSDVCPHRLA 70
Query: 175 KLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVKESQGVVW 232
LSEG+++DG LEC YHGWQF G C KIP D A A V +Y + QG+++
Sbjct: 71 PLSEGRIVDGCLECPYHGWQFSESGSCEKIPFQKEDGTANENSRATVASYPCRVEQGLLF 130
Query: 233 VW----MSQKTPPNPDKLPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 287
V+ + +T P P +P + + PG + ++PYD + LLEN++D +H+ +H
Sbjct: 131 VYPGKLENAETQPLP-TIPALDQY--PGEWVMADVFRDIPYDATTLLENVLDTSHVAFTH 187
Query: 288 DRTDYSAKREDAQPLGFEVTERTDRGFAGQWG----REKDGSMPNFLRFEAPCVLQNN-R 342
R++A+ +V++ GF G W R K G+ F AP + ++
Sbjct: 188 HPR--VGNRKNAKEFILDVSDIEKTGFTGIWEEGPRRGKLGAQKT--TFFAPSAMWHDIE 243
Query: 343 ESVDNKTGEKHYSTGLFLCRPTGQGKSMLIV----RFGTTGTSPWIKLFPDWYFHQSASK 398
ES + Y+ PT +GK +V RF + K P W+ H S
Sbjct: 244 ESSFGQVMTCVYAV------PTEKGKCRALVRLPFRFKSAIPRLVFKYTPRWFSHVSQMG 297
Query: 399 VFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTI 458
+ E D FL Q L K K + + D +V YRKW++ G F T
Sbjct: 298 ILEDDQIFLHLQERELEKSKKNYAQTCYLPTGSDLFVLAYRKWVENFGEP----FADQTF 353
Query: 459 SLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFN 518
+ P P+ + L RY H +C C++A+
Sbjct: 354 A-PAEPSQAQ---------------------------LLERYHSHTKNCSSCKAALANIQ 385
Query: 519 TWKNSLSTAAAL 530
+ L+ A L
Sbjct: 386 KIRTGLAIAGFL 397
>gi|428771559|ref|YP_007163349.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
gi|428685838|gb|AFZ55305.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
Length = 444
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 185/420 (44%), Gaps = 68/420 (16%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLSE 178
+++++ + WYP++ +D+ + P T+ Q++V++K + + + + D CPHRLA LSE
Sbjct: 3 SEFNFFQNWYPIFPLEDLEINKPQSFTLLGQRLVIWKGEKQKKFQVFLDLCPHRLAPLSE 62
Query: 179 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 233
G++ + G L C YHGWQF +G C IPQ + ++ V+ + +E ++WV
Sbjct: 63 GRIDEETGNLMCSYHGWQFNEKGICTCIPQAENQELVVKNQHNFAVKVFPTREENDLLWV 122
Query: 234 WMSQKTPPNPDK--LPWFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
W TP +K LP + GF S + +L YD +EN+ DP+H+P +H
Sbjct: 123 WADANTPDLAEKKPLPLSPQIDKERGFVWSSMVRDLEYDWQTFIENVADPSHVPFAHH-- 180
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
R+ AQP+ E+ + + + R + FE P +R G
Sbjct: 181 GLQGNRKQAQPIAIEIVKSSVNLIEAKVSR----LFTTTITFEPP-----SRLEYAIGFG 231
Query: 351 EKHYSTGLF-LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFH-QSASKVFEQDMGFLS 408
+K GL C P GK ++ +F K+ P W+ H ++ + V + DM L
Sbjct: 232 DKGQQLGLITYCIPIEPGKCRIVAQFARNFAYSLHKITPRWWEHIKTRNAVLDGDMILLH 291
Query: 409 SQNEVLLKE----------KVPTKELYFNLRSIDTWVAEYRKWMDKAGHG-MPY-YFGHS 456
Q L ++ K+PTK D V E+R+W D G +P+ G S
Sbjct: 292 QQERFLQQKLAGENWKNSYKMPTKA--------DRLVIEFRRWFDIYCEGKLPWEKVGFS 343
Query: 457 TISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKA 516
K+ + + + +RY +H +CK CR+A+K
Sbjct: 344 NFENLKI--------------------------SDNRQQILDRYSQHTKYCKSCRNALKT 377
>gi|257058681|ref|YP_003136569.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256588847|gb|ACU99733.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 497
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 201/470 (42%), Gaps = 68/470 (14%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
A + WT++WYP+ + + + P + + +++VL++D + RC +DRCPHRL LSEG
Sbjct: 22 ATFQWTKQWYPIAVMEFLDPSRPHPVQLLGKELVLWRDRNNQWRCFEDRCPHRLVPLSEG 81
Query: 180 QL-IDGRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVW 232
++ DG L C YH W+F+ GKCV IPQ A PRS C Y +E QG++W
Sbjct: 82 RVEADGTLLCAYHAWRFDETGKCVSIPQSKDKATENQHLNNPRS-CAIAYPTQEQQGLLW 140
Query: 233 VW-------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 285
VW + P +P E + + + ++P+ +EN+ DPAH+P+
Sbjct: 141 VWPESGDQAEQESQTRKPRIIPELEEKSDKVVKLFWYVRDMPFGWDYFMENVCDPAHVPV 200
Query: 286 SHDRTDYSAKREDAQPLGFEVTER---TDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNR 342
SH ++ +DA+ + ER T GFA F+ PC++ +
Sbjct: 201 SHHGM-MGSRYKDAKYYDM-IREREISTQNGFAFSLEPVAPTIEKAVHDFQPPCLM---K 255
Query: 343 ESVDNKTGEKHYSTGLFL-------CRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWY 391
S K G K + L++ CR G ++V+ T + F P W
Sbjct: 256 ISSTFKDGAK-FILALYVSPTRPGWCRHIG---CQILVKSNEGKTPKGLAFFALPMPTWL 311
Query: 392 FHQSASKVFEQDMGFLSSQNEVLLKEKVPT-KELYFNLRSIDTWVAEYRKWMD-KAGHGM 449
H AS QD+ FL Q +++ ++ + D V RKW++ +AG G+
Sbjct: 312 GHILASSFLHQDLVFLHYQEKIIARQGTQNWLSSVYTPNPQDKMVITLRKWLENRAGGGI 371
Query: 450 PYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKG 509
P+ G + P++P P + L + + H HC+
Sbjct: 372 PWAEGTN----PELPP-----------------PQRD------KQQLFDVWSTHTQHCRV 404
Query: 510 CRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVY 559
C+ A+K N + A + ++ R A L S SL G +
Sbjct: 405 CQDALKNINRARLFAYIGAGVCLLFGVILDARM-VAMTLGSQSLKEVGSW 453
>gi|428307436|ref|YP_007144261.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428248971|gb|AFZ14751.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 498
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 187/446 (41%), Gaps = 60/446 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ WT++WYP+ + + + P + + + +VL++DG RC +D CPHRL LSEG++
Sbjct: 25 FQWTKQWYPVAVVEFLEPSRPHAIELLGKNLVLWRDGTETWRCFEDYCPHRLVPLSEGRV 84
Query: 182 I-DGRLECLYHGWQFEGEGKCVKIPQ---LPADAKIPRS--ACVRTYEVKESQGVVWVWM 235
DG L C YH W+F+ G CV IPQ +AK S AC Y +E QG++WVW
Sbjct: 85 EPDGTLLCAYHAWRFDSNGNCVSIPQSKDKETEAKNCSSPKACAIAYPTQERQGLLWVWA 144
Query: 236 SQKTPP-------NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH- 287
T +P +P E + + +I +LPY +EN+ DPAH+P+SH
Sbjct: 145 ESGTQAQLESQLNSPCLIPELEENSDRVVKMAWSIRDLPYGWDFFMENVADPAHVPVSHH 204
Query: 288 ---DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRES 344
AK D P+ T GF+ + + F+ PC ++ +
Sbjct: 205 GIVGNRYQDAKYYDMIPIR---KMSTQSGFSFEIVPVPGNLVQAVHDFQPPCQMRIVSTA 261
Query: 345 VDNKTGEKHYSTGLFLCRPT-GQGKSMLIVRFGTTGTSPWIKLF-----PDWYFHQSASK 398
D G+ + RP + S ++ G SP F P W H S
Sbjct: 262 TDG--GQLILALYAIPTRPGWCRNISCQVLVKNEAGKSPSGLAFFALPMPTWLGHVLGSL 319
Query: 399 VFEQDMGFLSSQNEVLLKEKVPTKEL--YFNLRSIDTWVAEYRKWMD-KAGHGMPYYFGH 455
QD+ FL Q E ++ ++ K L + D V +R+W++ KAG G+P+ G
Sbjct: 320 FLHQDLVFLHYQ-EKIISQRSQGKWLNAVYTPNPQDKMVIAFRQWLEQKAGGGIPWANG- 377
Query: 456 STISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVK 515
LPA L + + H +C+ C+SA+K
Sbjct: 378 -----------------------CKELPA----AEQDKQKLFDVWATHTQNCRVCQSALK 410
Query: 516 AFNTWKNSLSTAAALLTALAILGAGR 541
N AA + + ++ R
Sbjct: 411 TINRLTVVTYLAAIVCLIVGVIADAR 436
>gi|443321338|ref|ZP_21050394.1| Rieske (2Fe-2S) domain-containing protein [Gloeocapsa sp. PCC
73106]
gi|442788956|gb|ELR98633.1| Rieske (2Fe-2S) domain-containing protein [Gloeocapsa sp. PCC
73106]
Length = 490
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 194/456 (42%), Gaps = 66/456 (14%)
Query: 116 ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAK 175
+ + + W ++WYP+ + + + P + + + +VL++ KG+ C +D CPHR A
Sbjct: 10 QTKAESFQWHQQWYPVAVVQYLDPTKPNKIKLLGKNLVLWQKQKGQWSCLEDFCPHRGAP 69
Query: 176 LSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKI-------PRSACVRTYEVKES 227
LSEG++ DG L C YHGW+F EG+CVKIPQ D I P+++CV Y ++ +
Sbjct: 70 LSEGRVESDGTLMCAYHGWRFNDEGQCVKIPQC-KDQHIEIKHCQNPKASCV-AYPLQIA 127
Query: 228 QGVVWVWMS-------QKTPPNPDKLPWFENFARPGFQDVS--TIHELPYDHSILLENLM 278
QG++W+W + P P E A+ V+ +I +LPY EN+
Sbjct: 128 QGLIWIWSEPGAQAEIESKLREPRLTP--ELAAKSSDMVVAPWSIRDLPYGWDFFFENVC 185
Query: 279 DPAHIPISHDRTDYSAKREDAQPLGFEVTER--TDRGFAGQWGREKDGSMPNFLRFEAPC 336
DPAH P+SH + +DA T + T GFA Q + D +P F+ PC
Sbjct: 186 DPAHAPVSH-HGFLGNRYQDANYYDMIPTRKLSTQDGFAFQLVSDLDEPIPVSHDFQPPC 244
Query: 337 VLQNNRESVDNKTGEKHYSTGLFLCRPTGQG-----KSMLIVRFGTTGTSPWIKLF---- 387
+++ +D+ + + PT G ++++ + S + +F
Sbjct: 245 LMK-----IDSLLPNGNKIIFILYAIPTQPGWCRHIACQILIKHNKSPFSKGLSIFALNI 299
Query: 388 PDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT-KELYFNLRSIDTWVAEYRKWMDKAG 446
P W H +S QD+ FL Q + L K + E + D V +R+W+
Sbjct: 300 PAWMNHLMSSFFLHQDLVFLHYQEKELAKRGMEQWLEQVYLPNPQDKMVIAFRQWLKYRA 359
Query: 447 HG-MPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVI 505
G +P+ F + LP + L + + H
Sbjct: 360 EGNIPWQFPSDSQYLPT--------------------------AEENKQKLFDVWTTHTQ 393
Query: 506 HCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR 541
HC C+ A++ N KN L + LA+ R
Sbjct: 394 HCYVCQRALRRINYAKNLLKIGGVVCLILALFIDNR 429
>gi|443325070|ref|ZP_21053783.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442795326|gb|ELS04700.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 497
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 161/357 (45%), Gaps = 34/357 (9%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ WT++WYP+ + + + P L + + +VL++D G+ C +D CPHRLA LSEG++
Sbjct: 26 FQWTKQWYPVAVAEFLDSSRPHALQLLGKDLVLWQDNSGQWHCFEDFCPHRLAPLSEGRI 85
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW- 234
DG L C YH W+F+ +G CV IPQ R+ +C Y ++ Q ++WVW
Sbjct: 86 ESDGTLLCAYHAWRFDSQGNCVNIPQSKDRETEARNCANQKSCAIVYPTQQLQDLIWVWP 145
Query: 235 ------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
+ P +P ++ + + I +LPY +EN+ DPAH+P+SH
Sbjct: 146 ESGAVAEVESQARKPRTVPELDDPSSRVVKPFWNIRDLPYGWDFFMENVADPAHVPVSHH 205
Query: 289 RTDYSAKREDAQPLGFEVTE--RTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVD 346
++ EDA+ T GFA + F+ PC + R +
Sbjct: 206 GI-MGSRYEDAKYYDMPRVRAISTQEGFAFGITPTASNVVQAVHDFQPPCQM---RVTTS 261
Query: 347 NKTGEKHYSTGLFL------CRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWYFHQSA 396
K G K + CR G+ ++++ T P + F P W H A
Sbjct: 262 FKDGGKLILALYAIPTRPGWCRHIGR---QILIKNDAGKTPPGLGFFALPMPKWLNHILA 318
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPT-KELYFNLRSIDTWVAEYRKWMDK-AGHGMPY 451
S QD+ FL Q +++ K E + D V +R+W+ K AG+G+P+
Sbjct: 319 SLFLHQDLIFLHYQEKIVAKRGANKWLETVYTPNPQDKAVIAFRQWLAKRAGNGVPW 375
>gi|158335992|ref|YP_001517166.1| Rieske (2Fe-2S) domain-containing protein [Acaryochloris marina
MBIC11017]
gi|158306233|gb|ABW27850.1| rieske 2Fe-2S domain protein, ISS putative [Acaryochloris marina
MBIC11017]
Length = 507
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 173/362 (47%), Gaps = 43/362 (11%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ WT++WYP+ + + + +P + + +++V++ D +GE C +DRCPHRLA LSEG++
Sbjct: 38 FQWTQQWYPVAVVEFLAPKSPHAIQLLGKELVIWHDQQGEWHCFEDRCPHRLAPLSEGRI 97
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQ------LPADAKIPRSACVRTYEVKESQGVVWVW 234
+DG L C YH W+F+G G+C+ IPQ + PRS C +Y + QG++WVW
Sbjct: 98 EVDGTLMCAYHAWRFDGSGQCLDIPQSRDLETAKQNRANPRS-CAISYPTQVQQGLIWVW 156
Query: 235 ---------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 285
+SQ+ +P +P E Q + +LPY +EN+ DPAH+P+
Sbjct: 157 PDPSEDSQTLSQER--SPRIIPELEELPDRAIQLFWYVRDLPYGWDFFMENIADPAHVPV 214
Query: 286 SHDRTDYSAKRE----DAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL-RFEAPCVLQN 340
SH + R+ D P+ EV+ T GFA + + + F+ PC ++
Sbjct: 215 SHHGIMGNRYRDANYYDMSPVR-EVS--TQEGFAFDITPLANTILRKAVHNFQPPCHMRI 271
Query: 341 NRESVDNKTGEKHYS-----TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWY 391
E+ + G+ + T CR G ++++ T P + F P W
Sbjct: 272 --ETTFARDGQMILALYASPTRPGWCRHIG---CQVLIKDKDGKTPPGLGFFAWPMPKWL 326
Query: 392 FHQSASKVFEQDMGFLSSQNE-VLLKEKVPTKELYFNLRSIDTWVAEYRKWMD-KAGHGM 449
H A QD+ FL Q + + +E E + D V R+W+ +AG G+
Sbjct: 327 GHVLAPLFLHQDLVFLHYQEKRIGHQEPGDWLETVYTPNPQDKMVIALRQWIKTRAGGGI 386
Query: 450 PY 451
P+
Sbjct: 387 PW 388
>gi|359460881|ref|ZP_09249444.1| Rieske (2Fe-2S) domain-containing protein [Acaryochloris sp. CCMEE
5410]
Length = 507
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 196/450 (43%), Gaps = 68/450 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ WT++WYP+ + + + +P + + +++V++ D +G+ C +DRCPHRLA LSEG++
Sbjct: 38 FQWTQQWYPVAVAEFLDPKSPHAIQLLGKELVIWHDQQGKWHCFEDRCPHRLAPLSEGRI 97
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQ------LPADAKIPRSACVRTYEVKESQGVVWVW 234
+DG L C YH W+F+G G+C+ IPQ + PRS C +Y + QG++WVW
Sbjct: 98 EVDGTLMCAYHAWRFDGSGQCLDIPQSRDLETAKQNRANPRS-CAISYPTQVQQGLIWVW 156
Query: 235 -------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
S + +P +P E Q + +LPY +EN+ DPAH+P+SH
Sbjct: 157 PDPSENSQSLRQERSPRIIPELEELPDRAIQLFWYVRDLPYGWDFFMENIADPAHVPVSH 216
Query: 288 DRTDYSAKRE----DAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL-RFEAPCVLQNNR 342
+ R+ D P+ EV+ T GFA + + + F+ PC ++
Sbjct: 217 HGIMGNRYRDANYYDMSPVR-EVS--TQEGFAFDITPLANTILRKAVHNFQPPCHMRI-- 271
Query: 343 ESVDNKTGEKHYS-----TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWYFH 393
E+ + G+ + T CR G ++++ T P + F P W H
Sbjct: 272 ETTFARDGQMILALYASPTRPGWCRHIG---CQVLIKDKDGKTPPGLGFFAWPMPKWLGH 328
Query: 394 QSASKVFEQDMGFLSSQNE-VLLKEKVPTKELYFNLRSIDTWVAEYRKWMD-KAGHGMPY 451
A QD+ FL Q + + +E E + D V R+W+ +AG G+P+
Sbjct: 329 VLAPLFLHQDLVFLHYQEKRIGHQEPGDWLETVYTPNPQDKMVIALRQWIKTRAGGGIPW 388
Query: 452 YFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCR 511
P++P P + L + + H C+ CR
Sbjct: 389 QCD------PQLPP-----------------PQRD------KEQLFDIWNTHTKDCQACR 419
Query: 512 SAVKAFNTWKNSLSTAAALLTALAILGAGR 541
A+ K + +A + L ++ R
Sbjct: 420 GALNRIQQLKVVMWVSAVVCFGLGVMLDAR 449
>gi|428298626|ref|YP_007136932.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
gi|428235170|gb|AFZ00960.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
Length = 498
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 181/446 (40%), Gaps = 59/446 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ W ++WYP+ + + P G+ + + IVL++DG G+ C +D CPHRL LSEG++
Sbjct: 25 FQWKKQWYPVAVVDFLDSSRPHGMQLLGKDIVLWRDGSGKWCCFEDACPHRLVPLSEGRV 84
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLP---ADAK---IPRSACVRTYEVKESQGVVWVW 234
DG L C YH W+F+ +G CV IPQ +AK P+S C Y +E QG++WVW
Sbjct: 85 EADGTLLCAYHAWRFDSQGNCVNIPQTKDKQTEAKHCSNPKS-CAVVYPTQEKQGLLWVW 143
Query: 235 -------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ + P LP EN + + +LPY +EN+ DPAH+P+SH
Sbjct: 144 AESGSQALVESQLKAPRILPELENQSDKVIKLFWNFRDLPYGWDFFMENVADPAHVPVSH 203
Query: 288 DRTDYSAKREDAQPLGFEVT----ERTDRGFAGQWGREKDGSMPNFLRFEAPC---VLQN 340
+ ++ P +++ T GF+ + + F+ PC ++
Sbjct: 204 HGIVGNRYKD---PRYYDMIGLRQMSTQEGFSYEVTPTAANIKQSIADFQPPCHMRIVST 260
Query: 341 NRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWYFHQSA 396
+ T CR G ++V+ T P + F P W H A
Sbjct: 261 FEDGGQMILALYATPTRPGWCRHIG---CQVLVKNHENKTPPGLGFFALPMPIWLGHILA 317
Query: 397 SKVFEQDMGFLSSQNEVLL-KEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGH 455
S QDM FL Q + L K+ + + D V +R W++K G +
Sbjct: 318 SIFLHQDMVFLHYQEKALAQKQNDRWLDAVYTPNPQDKMVIAFRNWLEKRAGGNIDWASE 377
Query: 456 STISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVK 515
+ LP AP L + + H HC C+ A+K
Sbjct: 378 YNVQLP--------AP------------------ETDKQKLFDVWGTHTQHCSVCQDALK 411
Query: 516 AFNTWKNSLSTAAALLTALAILGAGR 541
N AA + L ++ R
Sbjct: 412 NINRLTILSFVAAVICGFLGVIIDAR 437
>gi|115456061|ref|NP_001051631.1| Os03g0805700 [Oryza sativa Japonica Group]
gi|108711641|gb|ABF99436.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113550102|dbj|BAF13545.1| Os03g0805700 [Oryza sativa Japonica Group]
gi|125546115|gb|EAY92254.1| hypothetical protein OsI_13974 [Oryza sativa Indica Group]
Length = 543
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 180/473 (38%), Gaps = 79/473 (16%)
Query: 107 PASEEESR----GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL 162
P EE R GE R +DW ++WYP+ D+ P G V ++V + DG GE
Sbjct: 66 PPVAEEVRAPAAGEER---FDWLDQWYPVAPVCDLDPRKPHGKMVLGLRVVAWFDGGGEW 122
Query: 163 RCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSAC 218
R D CPHRLA LSEG++ GRL+C YHGW F+G G C IPQ PA AC
Sbjct: 123 RVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSKAC 182
Query: 219 VRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSIL 273
V +Y ++W + + P D L P+F + P F V + + PY +
Sbjct: 183 VASYPSVVQNNILWFY-PRTEPEYRDVLQRKRPPYFPDLDDPSFNTVFGVRDFPYGYRNA 241
Query: 274 LENLMDPAHIPIS--------------HDRTDYSAKREDAQPLGFEVTERTDRGFAGQWG 319
L+ HI + H + +E P+ ++ E GF
Sbjct: 242 QAILLRNGHIGMQLDILCRGSIAMQNIHLLSTVEFDQERGGPVKMKIEEANIDGFL---- 297
Query: 320 REKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG----------LFLCRPTGQGKS 369
G RF APC + NR + +T H+ +FLC P G+S
Sbjct: 298 -SIQGENWGHFRFIAPCTI--NRSELPLET-LAHFDQEKQQQQPQGMLVFLCIPVAPGRS 353
Query: 370 MLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVP--TKELYFN 427
+I F + ++ K P W H + V + D+ L + V K Y
Sbjct: 354 RVIWVFPQSVSAWPDKFIPRWLHHMVTNTVLDSDLYLLHIEERNFAAVGVDKWQKACYVP 413
Query: 428 LRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGG 487
S D + +R W K Y H G + LP
Sbjct: 414 TLS-DNMIITFRNWFRK-------YCKHQV---------------GWATPMVNQLPT--- 447
Query: 488 IGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAG 540
T L RY+ HV+ C C +A+K + +L A+ + G G
Sbjct: 448 --TPTKDQLMERYWSHVMQCTSCSAALKWMRAMEVALQVASVAVVGFLAAGKG 498
>gi|359478793|ref|XP_002283586.2| PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent
translocon component 52, chloroplastic-like [Vitis
vinifera]
Length = 473
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 186/483 (38%), Gaps = 92/483 (19%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQ 180
+DW +WYP+ D+ P V +V++ D + E + D C HRLA LSEG+
Sbjct: 14 FDWLSQWYPVAPVCDLDKRKPHSKRVIGLDVVVWWDRNESEWKVFDDACAHRLAPLSEGR 73
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWMS 236
+ GRL+C+YHGW F G G C IPQ P D + A Y G+VW W
Sbjct: 74 IDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKARAAVYPSAVQHGIVWFW-- 131
Query: 237 QKTPPNPDKLPWFEN-FAR------PGFQDVSTI-----HELPYDHSILLENLMDPAHIP 284
PN D P F++ F + P D+S + P+ + IL+EN+MDPAH+
Sbjct: 132 ----PNTD--PQFKDIFTKKRPPYIPELDDLSYTKSMGARDFPFGYEILMENVMDPAHVA 185
Query: 285 ISH-------DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV 337
+H D A RE P+ V GF + + +P L + C+
Sbjct: 186 YAHYGIVQIPQAKDRXADREGGTPIEISVKRSAIDGFDAERELARSKFIPPCLYYT--CL 243
Query: 338 ----LQNNRESVDNKTGEK---HYSTG----LFLCRPTGQGKSMLIVRFGTTGTSPWIKL 386
Q+N T E+ H S + +C P G S LI F +
Sbjct: 244 DFPAYQSNESVSSGLTKEEPSSHMSPKRALLILICVPVSPGNSRLIWTFPRNFGLWTDHI 303
Query: 387 FPDWYFHQSASKVFEQDMGFLSSQNEVLLKEK---------VPTKELYFNLRSIDTWVAE 437
P W H S + + + D+ L + ++K VPTK D +
Sbjct: 304 IPRWMLHMSQNLILDSDLYLLHLEERKIMKAGPSNWHKACFVPTKS--------DAHIVA 355
Query: 438 YRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLA 497
+R W+ K G + + + +LP P L
Sbjct: 356 FRAWLRKYSGGQLDWGTNFSSALPPTPP---------------------------KEQLM 388
Query: 498 NRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSAS---LC 554
+RY+ HV++C C A K + L + L + ++ G A + + S LC
Sbjct: 389 DRYWSHVVNCSSCSVAYKGLQVLEVVLQIFSIALIGIPVINHGVMSVAARITAVSMAILC 448
Query: 555 LAG 557
A
Sbjct: 449 FAA 451
>gi|255585387|ref|XP_002533389.1| pheophorbide A oxygenase, putative [Ricinus communis]
gi|223526763|gb|EEF28989.1| pheophorbide A oxygenase, putative [Ricinus communis]
Length = 509
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 171/442 (38%), Gaps = 88/442 (19%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCH 165
P E +++GE+ +DW WYP+ D+ P V +V++ D + +
Sbjct: 73 PIFESDNQGEK----FDWFSHWYPIMPVCDLDKRVPHAKRVMGLDVVVWWDRNENSWKVF 128
Query: 166 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRT 221
D CPHRLA LSEG++ GRL+C+YHGW F G C IPQ P D + ACV
Sbjct: 129 DDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNSSGDCKFIPQAPQDGPPVHTFKKACVAA 188
Query: 222 YEVKESQGVVWVWMSQ----KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHS---ILL 274
Y +VW W + K + +K P+F P + + E P+ ++ +L
Sbjct: 189 YPSTVQNDIVWFWPNTNPEYKDILSKEKPPYFSELDDPSYTKSMSCREFPFGYAKYDLLF 248
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAG-QWGREKDGSMPNFLRFE 333
N +D RE P+ + + GF ++G + +F
Sbjct: 249 LNSLD----------------REGGSPINLNIEKLDKNGFVSTRFGGDS--------KFL 284
Query: 334 APCVLQNNRE-SVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWI-KLFPDWY 391
+PC + K G LFLC P G GKS LI F WI ++ P W
Sbjct: 285 SPCTYYSAFGLPAPAKAGNADEGVLLFLCVPVGPGKSRLIYAF-PRNFGVWIGRIMPRWV 343
Query: 392 FHQSASKVFEQDMGFLSSQNEVLLKEK---------VPTKELYFNLRSIDTWVAEYRKWM 442
H + V + D+ L + ++ VPTK D V +RKW+
Sbjct: 344 SHLVENLVLDSDLYLLHLEERKIMDIGPSNWQKACFVPTKS--------DAQVVAFRKWL 395
Query: 443 DKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFR 502
K G + G +LP P L +RY+
Sbjct: 396 KKYSDGQINWGGKFNGALPPSPP---------------------------KDQLMDRYWS 428
Query: 503 HVIHCKGCRSAVKAFNTWKNSL 524
HV++C C A K N + +L
Sbjct: 429 HVVNCSSCSLAYKRLNALEVAL 450
>gi|332707041|ref|ZP_08427101.1| Rieske, 2Fe-2S domain protein [Moorea producens 3L]
gi|332354306|gb|EGJ33786.1| Rieske, 2Fe-2S domain protein [Moorea producens 3L]
Length = 502
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 192/447 (42%), Gaps = 61/447 (13%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ WT++WYP+ + + + P + + +++VL++DG + RC +D CPHRLA LSEG++
Sbjct: 29 FQWTKQWYPVAVVEFLAPSRPHKIQLLGKELVLWRDGSDQWRCFEDFCPHRLAPLSEGRV 88
Query: 182 I-DGRLECLYHGWQFEGEGKCVKIPQLP------ADAKIPRSACVRTYEVKESQGVVWVW 234
DG L C YH W+F+ EG CV IPQ + P+S C Y +++QG++WVW
Sbjct: 89 EPDGTLLCAYHAWRFDAEGNCVSIPQSQDQETEVKNCSNPKS-CAVAYPTQQNQGLLWVW 147
Query: 235 -------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ P +P E+ + + I +LPY +EN+ DPAH+P+SH
Sbjct: 148 PESGSKAQQESQLRKPRLIPELESDSDRVVKLFWNIRDLPYGWDFFMENVADPAHVPVSH 207
Query: 288 DRTDYSAKREDAQ----PLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRE 343
++ EDA+ P E++ T GF+ + F+ PC ++
Sbjct: 208 HGI-MGSRYEDAKYYDMPCLREIS--TQEGFSFAINPTVETVAEAVHDFQPPCHMRIVTS 264
Query: 344 SVD-NKTGEKHYS--TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWYFHQSA 396
D K Y+ T CR G ++V+ T + F P W H A
Sbjct: 265 YNDGGKLILALYAIPTRPGWCRHIG---CQVLVKNEAGKTPEGLGFFALPMPIWLGHVLA 321
Query: 397 SKVFEQDMGFLSSQNEVLL-KEKVPTKELYFNLRSIDTWVAEYRKWMDK-AGHGMPYYFG 454
S QD+ FL Q ++L +++ + + D V +R+W K AG +P+
Sbjct: 322 SVFLHQDLVFLHYQEKILARRQQQDWLDAVYTPNPQDKMVITFRQWFKKRAGGTIPWD-- 379
Query: 455 HSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAV 514
+G++ LP + L + + H C C+ A+
Sbjct: 380 ---------------------SGINDQLPN----AELDKKQLFDVWSTHTKDCVVCQKAL 414
Query: 515 KAFNTWKNSLSTAAALLTALAILGAGR 541
N AAAL + I+ R
Sbjct: 415 TNINRATLISYGAAALCLLIGIVMDAR 441
>gi|384252187|gb|EIE25663.1| ISP domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 357
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 151/322 (46%), Gaps = 30/322 (9%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDR 168
E + ++ A YDW ++WYP++ D+P+ P + +FD+ IV+ + GKG + DR
Sbjct: 41 EPAPQPQQSEAFYDWRQQWYPVHYAADLPEGDPQRVWLFDEAIVVARRPGKGPI-AMLDR 99
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKE 226
CPHR A LS+G++ G L+C YHGW F+G+ G C IPQ+ I C E
Sbjct: 100 CPHRAAALSQGRMTAAGNLQCAYHGWSFDGKTGDCTNIPQVSQGGTISGRTCATALPCAE 159
Query: 227 SQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 286
QG+VWV+ S P+ D + PG+ I + P D +++LEN+ DP H +
Sbjct: 160 YQGIVWVYPSPGARPSTDTIVGLPELDEPGWTSDDFIRDFPVDFTLVLENVADPDHGVFA 219
Query: 287 HDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGR------------EKDGSM-------P 327
H T + + A+ +V+ +G GR +KD +M
Sbjct: 220 HQTTIFDSFAASAE-YPMQVSTEPGKGGPKVIGRVPGVLKMTGRGSDKDKAMFGEQANVT 278
Query: 328 NFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF 387
+ L FE P +++ +R + +G + T + C P G G++ R+ +P +
Sbjct: 279 STLAFEPPTLVRWSRF---DSSGTTRFITAFYCC-PAGVGRTRFFTRY-VRNIAPQLHP- 332
Query: 388 PDWYFHQSASKVFEQDMGFLSS 409
P W F+ + +Q F S
Sbjct: 333 PHWLFNIFLNAFLDQAGPFSCS 354
>gi|297746464|emb|CBI16520.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 190/491 (38%), Gaps = 91/491 (18%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCH 165
P +E ER + + EEWYP+ D+ P V +V++ D + E +
Sbjct: 110 PFRQESQMDERVLTE---IEEWYPVAPVCDLDKRKPHSKRVIGLDVVVWWDRNESEWKVF 166
Query: 166 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRT 221
D C HRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + A
Sbjct: 167 DDACAHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKARAAV 226
Query: 222 YEVKESQGVVWVWMSQKTPPNPDKLPWFEN-FAR------PGFQDVSTI-----HELPYD 269
Y G+VW W PN D P F++ F + P D+S + P+
Sbjct: 227 YPSAVQHGIVWFW------PNTD--PQFKDIFTKKRPPYIPELDDLSYTKSMGARDFPFG 278
Query: 270 HSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF 329
+ IL+EN+MDPAH+ +H A RE P+ V GF + + +P
Sbjct: 279 YEILMENVMDPAHVAYAHYGI---ADREGGTPIEISVKRSAIDGFDAERELARSKFIPPC 335
Query: 330 LRFEAPCV----LQNNRESVDNKTGEK---HYSTG----LFLCRPTGQGKSMLIVRFGTT 378
L + C+ Q+N T E+ H S + +C P G S LI F
Sbjct: 336 LYYT--CLDFPAYQSNESVSSGLTKEEPSSHMSPKRALLILICVPVSPGNSRLIWTFPRN 393
Query: 379 GTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEK---------VPTKELYFNLR 429
+ P W H S + + + D+ L + ++K VPTK
Sbjct: 394 FGLWTDHIIPRWMLHMSQNLILDSDLYLLHLEERKIMKAGPSNWHKACFVPTKS------ 447
Query: 430 SIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIG 489
D + +R W+ K G + + + +LP P
Sbjct: 448 --DAHIVAFRAWLRKYSGGQLDWGTNFSSALPPTPP------------------------ 481
Query: 490 TMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLV 549
L +RY+ HV++C C A K + L + L + ++ G A +
Sbjct: 482 ---KEQLMDRYWSHVVNCSSCSVAYKGLQVLEVVLQIFSIALIGIPVINHGVMSVAARIT 538
Query: 550 SAS---LCLAG 557
+ S LC A
Sbjct: 539 AVSMAILCFAA 549
>gi|254430676|ref|ZP_05044379.1| pheophorbide A oxygenase [Cyanobium sp. PCC 7001]
gi|197625129|gb|EDY37688.1| pheophorbide A oxygenase [Cyanobium sp. PCC 7001]
Length = 464
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 147/343 (42%), Gaps = 24/343 (6%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRLAKLSEGQLI 182
W +WY + D+ P T+ +Q +VL+ D + R +D CPHRL LSEG+L
Sbjct: 3 WNNQWYAVAYLDDLDRRRPTPFTLLEQDLVLWWDAAADTWRAFEDVCPHRLVPLSEGRLN 62
Query: 183 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKI-----PRSACVRTYEVKESQGVVWVWMS 236
G LEC YHGW F+G G+C IPQ D RS C QG+++V+
Sbjct: 63 GRGELECPYHGWSFDGSGRCTAIPQADPDQAAVACSSARSRCT-ALPTATGQGLLFVFAG 121
Query: 237 QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKR 296
+ LP P + T +LP D LLEN++D +H+P +H RT +R
Sbjct: 122 EPERAPDVPLPLVPVLEEPDWLVQDTFRDLPMDALTLLENVLDVSHVPFTHHRT--VGRR 179
Query: 297 EDAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHY 354
E+A P+ +T GF +W G + F F APC++ ++ + G
Sbjct: 180 ENAAPVEATITAEGPDGFTAEWLEGPRRGRLGSQFTTFAAPCLMWHDLTA----KGFARI 235
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWYFHQSASKVFEQDMGFLSSQ 410
T ++ P G+ L RF S +L P W H + V E D FL Q
Sbjct: 236 LTVVY-ATPIRPGECRLFARFPFQFRSVLPRLLLRFRPRWLQHLANHTVLEDDQVFLHWQ 294
Query: 411 NEVLLKE--KVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPY 451
L + + F D +V W+D G G P+
Sbjct: 295 ERALARRGGSAAFSQACFLPTGSDVYVKALHAWVDSHG-GEPF 336
>gi|159478284|ref|XP_001697234.1| pheophorbide a oxygenase [Chlamydomonas reinhardtii]
gi|158274708|gb|EDP00489.1| pheophorbide a oxygenase [Chlamydomonas reinhardtii]
Length = 542
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 182/466 (39%), Gaps = 97/466 (20%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ W EWYP+ + +D+ P + + L+KD +G+ R +DRC HRLA LSEG++
Sbjct: 77 FQWHSEWYPVGIIEDLDPRRPHATHLLGIPLALWKDAQGQWRAVEDRCSHRLAPLSEGRV 136
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAK------IPRSACVRTYEVKESQGVVWVW 234
DG L+C YHGWQF+G G C IPQL D K R +CVR Y + + G++WV
Sbjct: 137 EKDGTLQCAYHGWQFDGRGACTHIPQLRNDEKAQQVACASRRSCVRAYPTQVAHGLLWVL 196
Query: 235 MSQKTPPNPDKLPW--FENFARP------GFQDVSTIHEL-------------------- 266
P+ W E P G V+ I EL
Sbjct: 197 ------PDSSAAGWEKVEVVVTPAACLQAGTVPVTAIPELLAPGGSANGRSQFGNWYARD 250
Query: 267 -PYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTD-RGFAGQWGREKDG 324
P IL ENL+DPAH+P +H + +E G T RTD G AG K
Sbjct: 251 MPVRFDILAENLLDPAHLPFAHHGVMGNRNKEQ----GSSTTLRTDTMGVAGFVCDAKLN 306
Query: 325 SMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQG------KSMLIVRFGTT 378
+ ++AP +++ S+ T L C P G ++L +
Sbjct: 307 GPEGTVSWQAPSLIKYEFGSLPFIT--------LLYCVPAKPGWSRFYSATVLDANVKSA 358
Query: 379 GTSPWIKLFP-----DWYFHQSASK-VFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSID 432
P I L W+ H + + + D L Q +LL++ + Y+ D
Sbjct: 359 IPGPAIALVKLISNIRWFDHVTRRHLILDGDTYMLHVQERLLLEKNNDWRGAYYMPAPAD 418
Query: 433 TWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMH 492
V R+W D+ G +P + LP M
Sbjct: 419 GSVVATRRWFDEHGGAVPTC--EPGVQLPP---------------------------QMS 449
Query: 493 APNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILG 538
+ RY +H +CK C A++ T L+ +L AL ++
Sbjct: 450 KEAVLERYHQHTKNCKDCSQALRNVET-ATWLAAGGGVLAALVLVA 494
>gi|209528461|emb|CAR82238.1| pheophorbide a oxygenase [Pisum sativum]
Length = 282
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 146/287 (50%), Gaps = 36/287 (12%)
Query: 152 IVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG-RLECLYHGWQFEGEGKCVKIPQLPAD 210
++ Y + K + D+CPHRLA LSEG++ +G L+C YHGW F+G G C IPQ +
Sbjct: 8 VIWYDNSKSQWVVFDDKCPHRLAPLSEGRIDEGGNLQCSYHGWSFDGSGGCAVIPQASPE 67
Query: 211 AKIPRS-----ACVRTYEVKESQGVVWVW-----MSQKTPPNPDKLPWFENFARPGFQDV 260
R+ AC + SQG+++VW + P LP ++F +P F V
Sbjct: 68 GPESRAIRSPRACATRFPTLVSQGLLFVWPDENGWEKANASKPPMLP--DDFVKPEFAMV 125
Query: 261 STIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGR 320
+ +L Y + L+EN+ DP+HI +H + + +R+ A+PL F++ GF+G
Sbjct: 126 NIQRDLFYGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLPFKMDSGGSWGFSG---- 179
Query: 321 EKDGSMPNFLRFEAPCVLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGKSMLIV- 373
+G+ +F APC N E +D K G++ + +++C P GK+ IV
Sbjct: 180 ANEGNPRISSKFVAPCYYINKVE-IDTKLPIVGDQKWV--IWICSFNVPMAPGKTRSIVC 236
Query: 374 ------RFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVL 414
+F G S W ++ P WY H +++KV++ DM L Q +V
Sbjct: 237 SARNFFQFTVPGPS-WWQVVPRWYEHWTSNKVYDGDMIVLQGQEKVF 282
>gi|345846655|gb|AEO19899.1| pheophorbide a oxygenase [Pyrus x bretschneideri]
Length = 311
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 128/240 (53%), Gaps = 20/240 (8%)
Query: 108 ASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQD 167
+E+E + ++W + WYP+ L +D+ P + + +V++ DG+ + D
Sbjct: 80 GAEDEIEDATSTSKFNWRDHWYPVSLIEDLDPRLPSPFQLLGRDLVIWYDGESWV-AFDD 138
Query: 168 RCPHRLAKLSEGQLIDG-RLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRT 221
RCPHRLA LSEG++ +G L+C YHGW F+G G CVKIPQ ++ R+ AC
Sbjct: 139 RCPHRLAPLSEGRIDEGGNLQCSYHGWSFDGCGSCVKIPQASSEGPEARAVRSPRACATR 198
Query: 222 YEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 276
+ SQG+++VW + P LP + F++P F V+ +L Y + L+EN
Sbjct: 199 FPTLVSQGLLFVWPDENGWERANATKPPMLP--DEFSKPEFSSVTIQRDLFYGYDTLMEN 256
Query: 277 LMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPC 336
+ DP+HI +H + + +R+ A+PL F++ + GF+G DG+ F APC
Sbjct: 257 VSDPSHIDFAHHKV--TGRRDRAKPLPFKLEDSGPWGFSGA----NDGNPRITAEFIAPC 310
>gi|428184362|gb|EKX53217.1| hypothetical protein GUITHDRAFT_53010, partial [Guillardia theta
CCMP2712]
Length = 406
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 160/373 (42%), Gaps = 62/373 (16%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVL-YKDGKGELRCHQDRCPHRLAKLSEGQL----- 181
WYPL K V + P +++ +VL Y++ R DRCPHRL +LSEG++
Sbjct: 1 WYPLGFEKFVNKEKPCQVSILGTSVVLWYENTSSSWRAALDRCPHRLVRLSEGRIDPVSG 60
Query: 182 ----------IDGRLECLYHGWQFEG----EGKCVKIPQLPADAKIPRS-ACVRTYEVKE 226
I G +EC YHGW+F +G C IPQ +AK+ R+ + + T V+
Sbjct: 61 NIKSTWDSSHITGNIECPYHGWKFRAHDAVKGSCTCIPQSKDEAKLERAPSRLITLPVQC 120
Query: 227 SQGVVWVW----MSQKTPPNPDKLP--WFENFARPGFQDVSTIHELPYDHSILLENLMDP 280
G++W W M + P+P KL + PG V +LP D +IL+EN++DP
Sbjct: 121 RDGMIWCWTARLMGSEAEPDPSKLSAMLLDRIGAPGIMHVDYFRDLPMDATILMENVLDP 180
Query: 281 AHIPISHDRTDYSAKREDAQPLGFEVTERTD-RGFAG------QWGREKDGSMPNFLRFE 333
+H+P +H RT ++RE A PL + + GF+ K G F+
Sbjct: 181 SHLPFTHHRT--ISRRERASPLTLAMKQTVSPSGFSATKTAGDTLNTSKTGGSVEFIAPN 238
Query: 334 APCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVR--FGTTGTSPWIKL----- 386
N ++S + + P G S + VR F T + L
Sbjct: 239 TVISATNRKQSFSD--------WNVVYAVPQSPGLSRIYVRIVFETAKMPLPLSLIFKFA 290
Query: 387 --FPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKV---------PTKELYFNLRSIDTWV 435
P + H + K+ E D FL Q ++L E K +F DT V
Sbjct: 291 FSLPSFLLHLNNHKILEDDNVFLHFQGKLLQGEARFRRGNLLSPDWKTRFFLPTKSDTLV 350
Query: 436 AEYRKWMDKAGHG 448
+ +R+W+DK G
Sbjct: 351 SAFRQWLDKYTGG 363
>gi|298705514|emb|CBJ28781.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 190
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 101/165 (61%), Gaps = 19/165 (11%)
Query: 128 WYPLYLTKDVPDD-APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGR 185
WY + +D+ + P +++FD+ ++LY+D G L+C D CPHR AKLSEGQ+ DG
Sbjct: 30 WYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGN 89
Query: 186 LECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK------ 238
+ECLYHGWQFEG +G CVK+PQLP A PR+A +R Y + ++GVV+VWM +
Sbjct: 90 IECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGA 149
Query: 239 -----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLM 278
P PD L EN +P F + +LPYD S L ENL+
Sbjct: 150 KDILPIPSTPDNLD--EN--KPTFT-YEFVCDLPYDWSYLTENLV 189
>gi|384249925|gb|EIE23405.1| ISP domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 496
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 185/448 (41%), Gaps = 80/448 (17%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQDRCPHRLAKLSEGQ 180
+DW +WYPL +D+ P + + +++V++ D + + +DRCPHRLA LSEG+
Sbjct: 46 FDWARQWYPLAFVEDLDPGRPHAMELLGKRLVIWYDSRQHKWTAFEDRCPHRLAPLSEGR 105
Query: 181 L--IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA------CVRTYEVKESQGVVW 232
+ DG L C YHGW+F G+G C +IPQ DA+ +A C + + SQG VW
Sbjct: 106 IEPSDGTLMCSYHGWRFRGDGACTRIPQ-ALDARAEDTACSSGRSCAAVHPTQVSQGYVW 164
Query: 233 VW---------MSQKTPP--NPDKLPWFENFARPGFQDVST----IHELPYDHSILLENL 277
VW S PP P+ P A G +S +LPY +L+EN
Sbjct: 165 VWGDCSASAAAESALMPPLLIPELSPDDTGQATDGGPVISAASRYARDLPYSWDVLVENF 224
Query: 278 MDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV 337
+DP+H+ +H RE FE++ TDRG D P +
Sbjct: 225 LDPSHVSFAHH--GVQGNRESENVGVFEISP-TDRG---------DPMHPP----QEAIS 268
Query: 338 LQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSML---IVRFGTTGTSPW---IKLFPDWY 391
+ + + G+ +S PTG G+S + ++ +P+ L P W
Sbjct: 269 MDVKSAAFGTRGGKVKWSQMPMFVVPTGPGRSRVLWWLIVHADGLPAPFRALAGLKPRWA 328
Query: 392 FHQSASKVFEQDMGFLSSQNEVLLKEKVPT---KELYFNLRSIDTWVAEYRKWMDKAGHG 448
H + + VF+ D L Q VL +++ + YF D V +R+W ++ G
Sbjct: 329 DHLTRNLVFDGDNIILHIQERVLAEDRRKGGSWRRSYFMPTQADRIVTAFRQWFEERAGG 388
Query: 449 MPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCK 508
P + AV L +RY H HCK
Sbjct: 389 GPIAGNADADRIEPSRAV-----------------------------LLDRYSSHTRHCK 419
Query: 509 GCRSAVKAFNTWKNSLSTAAALLTALAI 536
C A+ + ++ TA A+L+ L +
Sbjct: 420 SCSQALGVAKVLQVAV-TALAVLSTLGL 446
>gi|323449061|gb|EGB04952.1| hypothetical protein AURANDRAFT_11520 [Aureococcus anophagefferens]
Length = 383
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 154/348 (44%), Gaps = 39/348 (11%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
W + W+PL D+ P + V +VL++DG + R DRCPHR A+LSEG++ D
Sbjct: 3 WFDRWWPLAFESHAFDEKPQHVEVLGAPVVLWRDGD-DWRAALDRCPHRFARLSEGRVAD 61
Query: 184 -GRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ---- 237
G +EC YHGW F+G G C IPQ R+ V G++WVW S
Sbjct: 62 DGCIECPYHGWTFDGATGACKAIPQ--GSTPTARAGATALPTVARG-GLIWVWTSALYDG 118
Query: 238 --KTPPNPDKLPWF----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 291
P+ L E F G ELP D ++LLEN+MDP+H+P +H D
Sbjct: 119 AANAAPDVGALDALSLQAEVFDAGGASIADYSRELPMDATMLLENVMDPSHLPYTH--HD 176
Query: 292 YSAKREDAQPLGFEVTE-RTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
+KR +A P+ + TD GF + F+R++AP ++ + E+ G
Sbjct: 177 TISKRANAGPIDLRLDRPATDEGFTLAKSFPDRADVSGFVRYDAPSLVLS--ETDRGPGG 234
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRF-----GTTGTSPWI--KLFPD---WYFHQSASKVF 400
+ ++ + P G+ L VR G ++ ++ P+ W H S KV
Sbjct: 235 FRDWN--VVYAVPVAPGRCRLFVRVVFEVSKLEGPQKFVFERILPNAPPWAIHLSNHKVL 292
Query: 401 EQDMGFLSSQNEVLLKEKVP-----TKELYFNLRSIDTWVAEYRKWMD 443
E D FL L + + LY + D V YR+W+D
Sbjct: 293 EDDNVFLHHAGAALRDDDALHPADWERRLYMPT-AADAGVRAYRRWLD 339
>gi|302844701|ref|XP_002953890.1| chlorophyll a oxygenase [Volvox carteri f. nagariensis]
gi|300260702|gb|EFJ44919.1| chlorophyll a oxygenase [Volvox carteri f. nagariensis]
Length = 657
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 37/329 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP + + D + +F + VL++D KG+ C +D C HR LS G++++G++
Sbjct: 315 WYPAEFSAKLGQDTLVPFELFGEPWVLFRDEKGQPACIKDECAHRACPLSLGKVVEGQVV 374
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F G+G C K+P P R+ V E G +WVW P LP
Sbjct: 375 CAYHGWEFNGDGHCTKMPSTPH----CRNVGVSALPCAEKDGFIWVWPGDGLPAQ--TLP 428
Query: 248 WFENFARP--GFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
+FARP GFQ + I ++P +H +L+ENL+D AH P +H T P+
Sbjct: 429 ---DFARPPEGFQVHAEIMVDVPVEHGLLMENLLDLAHAPFTHTTTFAR-----GWPVPD 480
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV------LQNNRESVDNKTGE--KHYST 356
V T++ +G W P + F+ PC+ L + + T K++
Sbjct: 481 FVKFHTNKLLSGYW-----DPYPIDMAFQPPCMVLSTIGLAQPGKIMRGVTASQCKNHLH 535
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVL 414
L +C P+ +G + L+ R + PW++ P D + A +V +D+ + Q + L
Sbjct: 536 QLHVCMPSKKGHTRLLYRM-SLDFLPWMRYVPFIDKVWKNVAGQVLGEDLVLVLGQQDRL 594
Query: 415 LKEKVPTKELYFNLRSIDTWVAEYRKWMD 443
L+ + N D YR+W +
Sbjct: 595 LR----GGNTWSNPAPYDKLAVRYRRWRN 619
>gi|282154870|dbj|BAI60053.1| pheophorbide a oxygenase [Brassica oleracea]
Length = 299
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 149/304 (49%), Gaps = 39/304 (12%)
Query: 150 QQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQL 207
+ +VL+ D + D CPHRLA LSEG+L +G L+C YHGW F G G C +IPQ
Sbjct: 3 RDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFAGCGSCTRIPQA 62
Query: 208 PADA------KIPRSACVRTYEVKESQGVVWVW-----MSQKTPPNPDKLPWFENFARPG 256
K PR AC + SQG+++VW + P +LP ++F +P
Sbjct: 63 ATSGPEARAVKSPR-ACAIKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP--DDFDKPE 119
Query: 257 FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAG 316
F V+ +L Y + L+EN+ DP+HI +H + + +R+ A+PL F+V GF G
Sbjct: 120 FSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQG 177
Query: 317 QWGREKDGSMPNFLRFEAPCVLQNNRESVDNK---TGEKHYSTGLFLCR---PTGQGKSM 370
D S +F APC N E +D K G + + +++C P GK+
Sbjct: 178 ----ANDDSPKITAKFVAPCYSLNKIE-IDAKLPIVGNQKWV--IWICSFNIPMAPGKTR 230
Query: 371 LIV-------RFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE 423
IV +F G + W ++ P WY H +++ V++ DM L Q +V L + + + +
Sbjct: 231 SIVCSARNFFQFSVPGPA-WWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLSKSMESPD 289
Query: 424 LYFN 427
N
Sbjct: 290 YDVN 293
>gi|307106345|gb|EFN54591.1| hypothetical protein CHLNCDRAFT_58209 [Chlorella variabilis]
Length = 545
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 168/390 (43%), Gaps = 70/390 (17%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQ 180
+ W E WYPL + P + + +V+++D + G +D CPHRLA+LS+G
Sbjct: 65 FSWLECWYPLAPVSFLDAPKPHAMQLLGIDLVVWRDDQTGTWAAARDCCPHRLARLSDGL 124
Query: 181 LIDGRLECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSAC------VRTYEVK-------- 225
++ G L C YHGW+F G+C ++PQ P ADA+ + AC + T+ +K
Sbjct: 125 VLGGSLSCKYHGWEFSTTGECTRLPQAPGADAE--QRACTSARCHLATFPIKARAGLASC 182
Query: 226 ---------------ESQGVVWVWMS---------QKTP----PNPDKLPWFENFARPGF 257
QG+++VW S + TP P D WF G
Sbjct: 183 GPGEPRLESRAPAAHAEQGMLFVWPSDDPATWVAAEATPLPLVPENDDPTWFR-----GA 237
Query: 258 QDVSTIHEL-PYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTD-RGFA 315
D + ++L P D ++ EN DP+H P HDRT + +RED+ P+ + + +GF
Sbjct: 238 DDGAWGYQLMPVDFAVAQENPFDPSHAPYLHDRT-LNMRREDSVPMAMHLEGKVGPQGFL 296
Query: 316 GQWGR--EKDGSMPNFLRFEAPCVLQNN-------RESVDNKTGEKHYSTGLFLCRPTGQ 366
G + + SM +F PC + R+ VD + P G
Sbjct: 297 VSHGGYLKSNESMEGTRQFIPPCTARQGRLHIATPRQWVDYRYQNGTRQLFTIYTTPAGP 356
Query: 367 GKSMLIVRFGTTGTSPWIKL----FPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTK 422
G S L + TT ++L P W H + ++D L Q +VL + P
Sbjct: 357 GNSHLSFKLVTTPPPAPVRLLWNVLPPWLMHIGGAA--DEDRTILHGQQQVLQSQGWPKA 414
Query: 423 ELYFNLRSIDTWVAEYRKWMDKAGHG-MPY 451
YF DT V +RKW+ + G G +PY
Sbjct: 415 PHYFLPTPSDTGVVSFRKWLREFGGGEVPY 444
>gi|4914457|emb|CAB43696.1| putative protein [Arabidopsis thaliana]
gi|7269415|emb|CAB81375.1| putative protein [Arabidopsis thaliana]
Length = 548
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 195/504 (38%), Gaps = 100/504 (19%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDR 168
E E+ E +DW WYP+ D+ P G V +V++ D + + + D
Sbjct: 67 EPEALFEPGSDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDT 126
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---------KIP---- 214
CPHRLA LS+G++ GRL+C+YHGW F G G C IPQ P D K+
Sbjct: 127 CPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPHMVYMEHKVKVFGC 186
Query: 215 --------------RSACVRTYEVKESQGVVWVWMSQ----KTPPNPDKLPWFENFARPG 256
+ ACV Y ++W W + K +K P+ P
Sbjct: 187 INDYFGNANQVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPS 246
Query: 257 FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAG 316
F + ++PY + + + + + ++ D RE +PL V + ++GF
Sbjct: 247 FTKLMGNRDIPYGYLLAFTSFQ--LCVILLAEKID----REGGKPLEINVKKLDNKGFFS 300
Query: 317 --QWGREKDGSMPNFLRFEAPCVLQNNRESV-------------DNKTGEKHYSTGLFLC 361
+WG + F APCV +++ + + D K + +F+C
Sbjct: 301 KQEWG---------YSNFIAPCVYRSSTDPLPEQEHEYPAPAASDKAALSKRRLSLIFIC 351
Query: 362 RPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVP- 420
P G+S LI F K+ P W FH + + + D+ L + +L E+ P
Sbjct: 352 IPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDSDLHLLHVEERKIL-ERGPE 410
Query: 421 --TKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGH-STISLPKVPAVVEHAPAGLVAG 477
K + +S D V +R+W +K + G LP P +
Sbjct: 411 NWQKACFIPTKS-DANVVTFRRWFNKYSEARVDWRGKFDPFLLPPTPPREQ--------- 460
Query: 478 VSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAA-ALLTALAI 536
L +RY+ HV +C C+ A K N + L A+ A++ +A+
Sbjct: 461 ------------------LFDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAV 502
Query: 537 LG---AGRQWRAFCLVSASLCLAG 557
L R LV+A L A
Sbjct: 503 LKQTTMSNVARIAVLVAAVLSFAA 526
>gi|242037723|ref|XP_002466256.1| hypothetical protein SORBIDRAFT_01g004450 [Sorghum bicolor]
gi|241920110|gb|EER93254.1| hypothetical protein SORBIDRAFT_01g004450 [Sorghum bicolor]
Length = 480
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 185/489 (37%), Gaps = 88/489 (17%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCH 165
P +EE + +DW ++WYP+ D+ AP G V +V + D G GE R
Sbjct: 60 PRAEEAPPSPSKTEAFDWLDQWYPIAPVCDLDPRAPHGKVVLGLSVVAWYDRGAGEWRVF 119
Query: 166 QDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRT 221
+D CPHRLA LS+G++ GRL+C YHGW F+G G C IPQ PA R ACV +
Sbjct: 120 EDACPHRLAPLSQGRIDGKGRLQCAYHGWCFDGAGACAFIPQAPALGPPVHENRRACVAS 179
Query: 222 YEVKESQGVVWVW----MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 277
Y ++W + + + P+F P + + ++ + + ++N+
Sbjct: 180 YPCVVQNNILWFYPRTEAEHRDVLRRKRPPYFAEIDDPSYFTTFGMRDVSVGYDVAVDNI 239
Query: 278 MDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV 337
D AH+P +H G +P F E P
Sbjct: 240 FDIAHVPYAH-----------------------------------KGLLPYFRDEEDP-- 262
Query: 338 LQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSAS 397
R + + L + P G+S +I F KL P W+FH +
Sbjct: 263 ---GRYAAGGEAAVWFMLVALII--PVAPGRSRVIWAFPRNAGVWLHKLIPRWFFHSVTN 317
Query: 398 KVFEQDMGFLSSQNEVLLKEKVPT--KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGH 455
+V + D+ + + + + Y S D V +R W K + H
Sbjct: 318 RVIDSDVCLMHVEERKFAAAGLENWHRSCYVPTSS-DGMVVAFRDWFRK-------HCNH 369
Query: 456 STISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVK 515
G A P + +L RY+ HV C C +A++
Sbjct: 370 QV-------------------GWGAPQPDHQLPPSSTKDHLLERYWSHVAQCTSCSAALR 410
Query: 516 AFNTWKNSLST-AAALLTALAI-----LGAGRQWRAFCLVSASLCLAGVYACSTAISMN- 568
+ + +L + +++ +LA+ L RA + +A LC +T I N
Sbjct: 411 SMRLLEVALQVMSVSVIGSLAVAKGSSLLTSVVQRAVVVTAAVLCFMASRWLATYIEKNF 470
Query: 569 -TTNFIRTH 576
+FI ++
Sbjct: 471 YFQDFIHSY 479
>gi|145355088|ref|XP_001421803.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582041|gb|ABP00097.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 510
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 200/479 (41%), Gaps = 82/479 (17%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQ 180
+DW+ WYPL + + P L V +++V Y D E R +D CPHR A LS G
Sbjct: 42 FDWSSAWYPLRPVSFLDANEPNELRVLGKKLVAYLDPTCKEWRVLEDSCPHRRAPLSLGY 101
Query: 181 L-IDGRLECLYHGWQFEG-EGKCVKIPQLPADAK------IPRSACVRTYEVKESQGVVW 232
+ DG L C YHGW F+G +G CV IP +A PRS C +Y + G++W
Sbjct: 102 VQKDGTLACRYHGWAFDGKDGSCVSIPMSVDEAAEKTACASPRS-CATSYPSRVEDGILW 160
Query: 233 VWMSQKTPPNPDKL------PWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPI 285
VW + D L P + AR G + ELP ++ LEN DP+H
Sbjct: 161 VWPTA----GADGLLASAGAPCATSLAREGTLPGEWGMVELPVGYAPALENQFDPSHAEW 216
Query: 286 SHDRTDYSAKREDAQPLGF-EVTERTDR-------GFA---GQWGREKDGSMPNFLRFEA 334
H R D + ++ GF +TE + R GF G + + G + + F A
Sbjct: 217 LHARYDAEGQLDERANAGFVAMTEFSVREGTMQKDGFVVEHGGYNKSNVGVSASRV-FTA 275
Query: 335 PCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWI-----KLFPD 389
PC + E +D K K Y + L PT G++++ +F S KL
Sbjct: 276 PC--SSRSEYLDAKG--KKYLSAAILYAPTEPGRTLMFTKFQAHQASAVQGAGARKLVRV 331
Query: 390 WYFH-----QSASKVFEQD-MGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMD 443
H SA + +QD + + E+ L+ K P K+ Y+ D V+ +R WMD
Sbjct: 332 GLSHGTPPGSSAYNLGDQDILAMHGVEVEMELQNK-PWKQSYYLPTPADAGVSAFRNWMD 390
Query: 444 KAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRH 503
K H+ + P VV+ A V + L +RY RH
Sbjct: 391 K----------HAGGKVAWAPGVVDDASK--VKSEAEQL---------------DRYHRH 423
Query: 504 VIHCKGCRSAVKAFNTWKNSLSTAAALLTA----LAILGAGRQWRAFCLVSASLCLAGV 558
HC C++A+ + A+ L A LA+ GA A +++ CLAG
Sbjct: 424 TKHCVACKTALSELGVLEERCVAASKYLLAGGLFLAVTGAAFDQEAPAIIAT--CLAGA 480
>gi|449527266|ref|XP_004170633.1| PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent
translocon component 52, chloroplastic-like, partial
[Cucumis sativus]
Length = 318
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 111 EESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRC 169
E GE R +DW +WYP+ D+ P G TV +V++ D + + D C
Sbjct: 71 ESEPGEER---FDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLC 127
Query: 170 PHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVK 225
PHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV +
Sbjct: 128 PHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFXSI 187
Query: 226 ESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLE 275
V+W W M +K PP + P F + + +LPY + IL E
Sbjct: 188 VQNDVLWFWPNSDPQYKDIMEKKKPP------YIPELDDPSFTKLISNRDLPYGYEILTE 241
Query: 276 NLMDPAHIPISH-------DRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
NLMDPAH+P +H + A RE +P+ V + GF
Sbjct: 242 NLMDPAHVPYAHYGIMGRLPKNREKADREGGKPIDIVVKDFNINGFIAN 290
>gi|38488613|dbj|BAD02269.1| chlorophyllide a oxygenase [Prochlorothrix hollandica]
Length = 366
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 134/291 (46%), Gaps = 24/291 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ +K++ PLG +FDQ VL++D +G C D C HR LS G++I GR++
Sbjct: 21 WYPVEFSKNLGMADPLGFELFDQCWVLFRDDQGTAACILDECAHRACPLSLGKVIQGRIQ 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-PDKL 246
C YHGW+++ +G+CV +P A S + T V E G++WVW P P
Sbjct: 81 CPYHGWEYDRQGECVHMPSCQA-----ISNPILTLPVMEQGGMIWVWPGTDEPGALPSLA 135
Query: 247 PWF-ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P +NF + +L +H ++LENL+D AH P +H T AK P
Sbjct: 136 PTLPDNFTL----QAELVMDLEVEHGLMLENLLDLAHAPFTH--TGTFAKGWPVPPF-VR 188
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTG 365
+ G W P + FE PC + + G + + C P G
Sbjct: 189 FANAATTPWTGHW-----DPYPIHMTFEPPCFVISTIGLRGKDCGRHLHQ--VHACLPRG 241
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWY--FHQSASKVFEQDMGFLSSQNEVL 414
QG++ L+ R W++ P + + A++V ++D+ + Q E L
Sbjct: 242 QGRTRLLYRLALD-FGHWLRWVPGTHCLWQHLANRVIQEDLRLVQGQQERL 291
>gi|434403930|ref|YP_007146815.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428258185|gb|AFZ24135.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 502
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 168/371 (45%), Gaps = 38/371 (10%)
Query: 111 EESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCP 170
E ++ + WT++WYP+ + + + P + + + VL++D +G+ C +D CP
Sbjct: 14 ESTKVNETEEKFQWTKQWYPVAIGECLDPSKPQPIELLGKNFVLWRDKQGKWNCFEDLCP 73
Query: 171 HRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEV 224
HRL +LSEG++ DG L C YH W+F GKCV +PQ + R+ +CV Y +
Sbjct: 74 HRLVRLSEGRVESDGTLLCAYHAWRFNSVGKCVSMPQSKDEETEARNCASSRSCVTVYPL 133
Query: 225 KESQGVVWVW-------MSQKTPPNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLEN 276
+E QG++W+W + + P +P E R + I +LPY +EN
Sbjct: 134 QERQGLLWLWPESGSQALIESKLKEPRVIPELEETPERIVNRSAWNIRDLPYGWDYFIEN 193
Query: 277 LMDPAHIPISHDRTDYSAKREDAQPLGFEVTER--TDRGFAGQWGREKDGSMPNFLRFEA 334
+ DPAH+P+SH ++ +DA + T GF+ + F+
Sbjct: 194 IADPAHVPVSHHNI-MGSRYKDANYFDMVSVRKLSTQEGFSFETKPTPPDIETLINDFQP 252
Query: 335 PCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSML----IVRFGTTGTSPWIKL---- 386
PC+++ SVD K+G K+ T P G + L I G P L
Sbjct: 253 PCLMR--VYSVD-KSGCKYILT--LYGVPIRPGWTRLIGNQIFVKNEKGEVPKKGLGFFA 307
Query: 387 --FPDWYFHQSASKVFEQDMGFLSSQNEVLL---KEKVPTKELYFNLRSIDTWVAEYRKW 441
P W H +S + QD FL Q +++ +EK K + D V +R+W
Sbjct: 308 LPMPIWLTHILSSMLLHQDSVFLHYQEKLMAQSPQEKWLAK--VYTPNPSDKMVITFRQW 365
Query: 442 MDK-AGHGMPY 451
+K AG +P+
Sbjct: 366 WEKRAGGEIPW 376
>gi|219130881|ref|XP_002185582.1| Tic55 component of chloroplast import machinery [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217402990|gb|EEC42947.1| Tic55 component of chloroplast import machinery [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 498
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 187/454 (41%), Gaps = 87/454 (19%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL--IDGR 185
W PL ++ D P L Q V Y+ G+ D CPHRLA LSEG++ R
Sbjct: 61 WVPLASVYELHPDRPTPLRFLGQSYVTYQSNDGQWAVFDDACPHRLAPLSEGRVDRQKNR 120
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVVWVWMSQKT 239
LEC YHGW+F+ +G+C +IPQ AD + A V++Y V + +++VW
Sbjct: 121 LECSYHGWEFDADGRCQEIPQ--ADFSTMQKAMQNERCHVKSYPVHVEKNILFVWPWADE 178
Query: 240 PP-----NPDKLPWFENFARPGFQDVST-IHELPYDHSILLENLMDPAHIPISHDRTDYS 293
P P P E+F ++ +T +LPY LLEN++DP+H+P +H
Sbjct: 179 DPLITVSQPHCAP--EHFMEGVSENCTTYTRDLPYGWDTLLENIVDPSHVPFAHH--GLQ 234
Query: 294 AKREDAQPLGFEV-TERTDRGFAGQWG------REKDGSMPNFLRFEAPCVLQNNRE--- 343
KREDA P+ ++ + GF Q+ R + G++ F AP V+ +
Sbjct: 235 GKREDAIPINMTSPSDLSPEGFVFQFEDRTMSMRRQGGAV-----FRAPFVIHYKADFET 289
Query: 344 SVDNKTGEKHYSTGLF----LCRPTGQGKSMLIVRFGTTGT------------SPWIKLF 387
K ++ S +F + PT G S +I+ G T + +
Sbjct: 290 PSKEKQKKRANSPKVFNLTAIMLPTKPGWSRIIL-MGAPRTKQIEKKEKERLVAKIFRKL 348
Query: 388 PDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGH 447
P W H +++ + D+ FL Q + + V + YF D V+ RKW+ + H
Sbjct: 349 PSWLVHTFSNRFLDSDLAFLHFQEQERERRGVDARA-YFMPAQSDRCVSALRKWILQYAH 407
Query: 448 GMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHC 507
+ + A L +G L NR+ +H HC
Sbjct: 408 --------------------------IPGPLPAPLTDRGV--------LFNRWTQHGEHC 433
Query: 508 KGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR 541
+ C SA K W+ + A+ LA A R
Sbjct: 434 RHCTSARKRVAKWRTNTLRLLAISLVLAKFTAAR 467
>gi|159463890|ref|XP_001690175.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
gi|115311321|sp|Q9ZWM5.2|CAO_CHLRE RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|61742126|gb|AAX54904.1| chloroplast chlorophyllide a oxygenase precursor [Chlamydomonas
reinhardtii]
gi|158284163|gb|EDP09913.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
Length = 645
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 154/329 (46%), Gaps = 37/329 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP + +P D + +F + V+++D KG+ C +D C HR LS G++++G++
Sbjct: 305 WYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVEGQVM 364
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F G+G C K+P P R+ V E G +WVW P + LP
Sbjct: 365 CPYHGWEFNGDGACTKMPSTP----FCRNVGVAALPCAEKDGFIWVWPGDGLP--AETLP 418
Query: 248 WFENFARP--GFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
+FA+P GF + I ++P +H +L+ENL+D AH P +H T P+
Sbjct: 419 ---DFAQPPEGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTHTSTFAR-----GWPVPD 470
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV------LQNNRESVDNKTGE--KHYST 356
V ++ +G W P + F+ PC+ L + + T K++
Sbjct: 471 FVKFHANKALSGFW-----DPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLH 525
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVL 414
L +C P+ +G + L+ R + PW++ P D + Q A++V +D+ + Q + +
Sbjct: 526 QLHVCMPSKKGHTRLLYRM-SLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRM 584
Query: 415 LKEKVPTKELYFNLRSIDTWVAEYRKWMD 443
L+ + N D YR+W +
Sbjct: 585 LR----GGSNWSNPAPYDKLAVRYRRWRN 609
>gi|255080538|ref|XP_002503849.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226519116|gb|ACO65107.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 668
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 179/407 (43%), Gaps = 70/407 (17%)
Query: 67 PIKAHKLRK--RTEPKLTKCHAVTDMSSSAVPTPDDHKV---LVG------PASEEESRG 115
P++A +L RT + T+ A + A D L+G P E +RG
Sbjct: 29 PVRAARLASTPRTRSRWTRASASGGTTIGAEEMAKDASAAEPLIGINPDRVPMVEAVNRG 88
Query: 116 ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAK 175
E ++WT++WYP+ + + P + + IV++KDG G+ +D+CPHRLA
Sbjct: 89 ETS-GTFNWTKQWYPVAVIDLLDTSKPHPTQLLGKDIVVWKDGAGKWNVFEDKCPHRLAP 147
Query: 176 LSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPR-----SACVRTYEVKESQG 229
LSEG++ DG L C YH W+F+G+G C +PQ + + R +C T E+QG
Sbjct: 148 LSEGRVEDDGTLLCAYHAWRFDGDGACTDMPQASSKEEADRVRANPRSCAFTRPCMEAQG 207
Query: 230 VVWVW---------MSQKTPP--NPDKLPWFENFARP--GFQDVSTIHELPYDHSILLEN 276
+VW W ++ TPP P+ +N P G+++ + ++PY + EN
Sbjct: 208 LVWAWGEGGKEAELEARMTPPLLVPEIEGVGKNGEAPGGGYRNHWQVRDMPYGWAAFFEN 267
Query: 277 LMDPAHIPISHDRTDYSAKREDAQPLGFE-VTERTDRGFAGQWGREKDGSMPNF------ 329
+DPAH +SH T ++ +D P GF V ER AG + D ++P F
Sbjct: 268 AIDPAHAVVSH-HTLVGSRYDD--PAGFNCVVERPMTAEAG-FRCAIDPAVPPFNTIGKY 323
Query: 330 -----LRFEAPCVLQNNRESVDNKTGEKHYS--TGLFLCR-------PTGQGKSMLIVRF 375
F+ PC+L+ + + + HY T CR G+G+ + R
Sbjct: 324 DAETSYDFQPPCLLKIDWRHEEARFLTSHYCVPTRPGWCRHFVATVCQRGEGEKVRQHR- 382
Query: 376 GTTGTSPWIKL------FPDWYFHQSASKVFEQDMGFLSSQNEVLLK 416
W KL P W H QDM L Q +++ +
Sbjct: 383 -------WFKLNLFTLTSPAWMTHVLGPTFLHQDMVLLHQQEKIIAQ 422
>gi|384245553|gb|EIE19046.1| hypothetical protein COCSUDRAFT_67947 [Coccomyxa subellipsoidea
C-169]
Length = 737
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 191/497 (38%), Gaps = 108/497 (21%)
Query: 103 VLVGPASEEESRGER------RVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK 156
VL+G SR ++ A + W+++WY + L + + P + + +++VL++
Sbjct: 239 VLLGAVEVARSRSDKDTGTPQEAAPFCWSKQWYAVSLLEALELKKPHPIKLLGKELVLWR 298
Query: 157 DGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS 216
D G +C +DRC HR A LSEG+++ L C YHGWQF G+CV +PQ R+
Sbjct: 299 DTSGTWQCFEDRCSHRQAPLSEGRVLGDTLMCSYHGWQFAQGGRCVNVPQAEGTRGNERA 358
Query: 217 -----ACVRTYEVKESQGVVWVWMS-------QKTPPNPDKLPWF--ENFAR-------- 254
+CV ++ QG+VWVW + P +PW ++ R
Sbjct: 359 CASPRSCVASFPTTVKQGIVWVWAEPGPLAAIEAAAKGPTLIPWISEDDVTRTPEGVPVI 418
Query: 255 ---PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT---- 307
PG Q +LP + +ENL DPAH +H E A E
Sbjct: 419 TVVPGMQ-----RDLPISYEHQMENLADPAHFNFAHHGVAGDMLHESAGTAHVEAVTSDE 473
Query: 308 ERTDRGFAGQ-----W-------GREKDGSMPNFL---RFEAPCVLQNNRESVDNKTGEK 352
E F G W GR + ++ + + F + VD + E
Sbjct: 474 ETAPAVFDGAEGLAYWVDMLMGVGRSVEHNLHHIVFPGLFTLKTFTPKDFPGVDWELLEI 533
Query: 353 HYSTGLFLCRPTGQGKSMLIVRFGTTGTS-PWI-----KLFPDWYFHQSASKVFEQDMGF 406
H PT G L+VR G + P + K P W H ++ + D
Sbjct: 534 H-------AVPTEPGHVRLLVRVFLAGHNLPLMPRLVSKYIPTWLSHIRGLEITDGDTVI 586
Query: 407 LSSQNEVLLKEKVPTKE----LYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPK 462
LS Q+ + E + + Y+ S D V RKW+D G G P+
Sbjct: 587 LSEQDRITRSETERSGQEWSKQYYMPTSSDRLVVATRKWLDSRGGGGPF----------- 635
Query: 463 VPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKN 522
P+ + M + +RY +H C C +A++ F
Sbjct: 636 --------------------PSARPLPAMTNEQMTDRYSQHTSDCPSCSAALRNF----R 671
Query: 523 SLSTAAALLTALAILGA 539
+L A L+ +A LGA
Sbjct: 672 ALRVMAGGLS-VAFLGA 687
>gi|125546117|gb|EAY92256.1| hypothetical protein OsI_13977 [Oryza sativa Indica Group]
Length = 525
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 205/530 (38%), Gaps = 75/530 (14%)
Query: 33 SLHSLFFSPL-LKIPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMS 91
SLH L + L L PS PP ISP A + R+ + P V+ ++
Sbjct: 5 SLHLLSLTRLSLPFRDTVTNPSTPRIPPWRRQWISPTDARR-RRLSMP-------VSAVA 56
Query: 92 SSA-VPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQ 150
+ A +P D K E + GE R +DW ++WYP+ +D+ P G V
Sbjct: 57 AEAPLPRAVDEK-------ETPAAGEER---FDWLDQWYPVAPVRDLDKRKPHGKMVMGI 106
Query: 151 QIVLYKDGKG-ELRCHQDRCPHRLAKLSEGQLIDGR--LECLYHGWQFEGEGKCVKIPQL 207
+V++ DG G E R D CPHRLA LSEG+ +DG+ L+C YHGW F+G G C IPQ
Sbjct: 107 SVVVWFDGGGGEWRVVDDACPHRLAPLSEGR-VDGKGCLQCAYHGWCFDGHGSCQFIPQA 165
Query: 208 PA---DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQD 259
PA ACV +Y ++W + + P + L P+ P
Sbjct: 166 PALGPPVHKNSKACVASYPSVVQNNILWFY-PRSEPEYKEILQRKRPPYIRELDDPSSVI 224
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAG--- 316
S + +L Y + L+ + + S + +E P+ + E GF
Sbjct: 225 NSGVRDLLYGYRNYLQAIHK--QLDASMYVCVFEFDQEGGLPIKMNIEELNIAGFHSNPE 282
Query: 317 -QWGREKDGSMPNFLR--FEA-PCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLI 372
WG K + + F A P V Q+N + + K E T +F C P G+ +I
Sbjct: 283 ENWGYFKFIAPVTLIGSPFRAKPVVDQDNNNTNNKKQPE---VTTVFFCIPVSPGRCRVI 339
Query: 373 VRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFL--SSQNEVLLKEKVPTKELYFNLRS 430
G + K+ P W+ H ++V + D L +N K Y S
Sbjct: 340 WANGYNLDGWFDKMIPRWWLHIKTNQVLDSDSSVLHIEKRNYAAFGLDNWHKACYVPTSS 399
Query: 431 IDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGT 490
D + +R W K + + LP VE
Sbjct: 400 -DNLIIAFRNWFKKYCNNQVGWLTPMVNQLPPASTRVE---------------------- 436
Query: 491 MHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAG 540
+ RY+ HV+ C C +A+K + +L A+ + G G
Sbjct: 437 -----VYERYWSHVMQCTSCSAALKWMRALEVALQVASVAVVGFLAAGKG 481
>gi|384249917|gb|EIE23397.1| hypothetical protein COCSUDRAFT_47272 [Coccomyxa subellipsoidea
C-169]
Length = 557
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 189/486 (38%), Gaps = 83/486 (17%)
Query: 103 VLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE- 161
+L P E S+ + + W +WYPL +D+ P + + +++V++ D + +
Sbjct: 65 ILDAPPKTEPSQEAEKEGTFVWARQWYPLAFVEDLDPGRPHAMELLGKRLVIWYDSRQQK 124
Query: 162 LRCHQDRCPHRLAKLSEGQL--IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA-- 217
+DRCPHRLA LSEG++ DG L C YHGW+F G+G C +IPQ DA+ +A
Sbjct: 125 WTAFEDRCPHRLAPLSEGRIEPSDGTLMCSYHGWRFRGDGACTRIPQ-ALDARAEDAACS 183
Query: 218 ----CVRTYEVKESQGVVWVW---------MSQKTPP------NPDKLPWFENFARPGFQ 258
C + + QG + VW + + PP +PD P
Sbjct: 184 SGRSCAAVHPTQVRQGFLHVWGEAGAEAAEEAARRPPVLIPELDPDAADAVMRDGSPTLD 243
Query: 259 DVST-IHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
I +LPY + L+ENL+DPAH+ +H+ S A T DR F
Sbjct: 244 SGKRYIRDLPYSYDFLVENLIDPAHVNYAHNGVIGSRNTPTAGYYEISPTPLPDRTFEFA 303
Query: 318 WGREKDGSMPNF------------LRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTG 365
DG + ++F AP ++ R GE + + PT
Sbjct: 304 TEHPSDGMSMDIVSKFMGRRTAYKIQFVAPAIV---RYYFPGYFGEVNDAQMWMAAVPTA 360
Query: 366 QGKSMLIVRF-----GTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVP 420
G+ + F G + + P W H + + VF+ D FL + V +
Sbjct: 361 PGRCRCLWWFFQPSVGASKRLQKVAAQPVWKDHMTRNLVFDGDNVFLHGADRVAAAAERE 420
Query: 421 T----KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVA 476
+ K YF D V E+R+W+D G G P I +
Sbjct: 421 SGSRWKGSYFMPAQADRMVLEFRRWLDSRGGGGPTPGDPGPILDDR-------------- 466
Query: 477 GVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT--WKNSLSTAAALLTAL 534
L +R+ +H HC C A+ F W + AA+LL +
Sbjct: 467 -----------------QKLLDRWEQHTKHCPSCLQALGKFQALRWAAVAAGAASLLVTV 509
Query: 535 AILGAG 540
+L +G
Sbjct: 510 GVLASG 515
>gi|290978282|ref|XP_002671865.1| predicted protein [Naegleria gruberi]
gi|284085437|gb|EFC39121.1| predicted protein [Naegleria gruberi]
Length = 563
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 186/410 (45%), Gaps = 62/410 (15%)
Query: 104 LVGPASEEESRGERRVADYDWTEEWYPLYLTKDVP--DDAPLGLTVFDQQIVLYKDGKGE 161
++ E + + + + D + WYP+ L+ D+ D P + + + +VLY+ G+
Sbjct: 153 VIEKIKEGSFKEKTNLNNMDMSLFWYPVALSTDIKINDKKPFVVKLLGEPLVLYRTSDGQ 212
Query: 162 LRCHQDRCPHRLAKLSEGQL--IDGR--LECLYHGWQFEGEGKCVKIPQLPAD--AKIPR 215
+ C D CPHR AKLS G++ +G+ LEC YHGW+FE +G+CV+IP + ++ + +
Sbjct: 213 VTCTLDLCPHRSAKLSTGEITEFEGKRSLECAYHGWRFEKDGQCVRIPSVSSERMKGLCK 272
Query: 216 SACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST--------IHELP 267
+ ++ +V E G++WVW + K + +++P E F + ST ++P
Sbjct: 273 TIKCQSKQVHECCGMIWVWPNDKVKSDINQIP-IELFREEYLTEDSTKPYIMLEKSRDIP 331
Query: 268 YDHSILLENLMDPAHIPISHDRT-----------------------DYSAKREDAQPLGF 304
++S++LENL+D AH+ +HD T D S + + + F
Sbjct: 332 CNYSLVLENLLDFAHLDFTHDGTLGKRSRATQVKTQLILSKDTPAQDDSVRSKLPTEMHF 391
Query: 305 EVTERTD----RGFAGQWGREK--DGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG- 357
+ T +D R ++ + K N F PC ++ ++ D G + G
Sbjct: 392 DKTIHSDSFTYRVTKPEYQKVKGVKREFGNITSFIPPCFVR--LDNTDYIEGGDLKNAGP 449
Query: 358 ----LFLCRPTGQGKSMLIVRF-GTTGTSPWIKLFPDWY--FHQSASKVFEQDMGFLSSQ 410
+F PTGQ + +I RF T ++ P Y QSA + +QD+ L
Sbjct: 450 RISQIFCMIPTGQNEHRIIFRFYSTIPVLNYLNKIPYIYSKLLQSADTILDQDLELLFGI 509
Query: 411 NEVLLKEKVPTKELYFNLRSIDTWVAEYRKW---MDKAGHGMPYYFGHST 457
+E + K +++ + + D + YR W M K Y+ G T
Sbjct: 510 SENVTKNGA---KVFSKIVNADAPIKAYRDWEAKMLKQNKNGIYFKGWET 556
>gi|115456065|ref|NP_001051633.1| Os03g0805900 [Oryza sativa Japonica Group]
gi|30102995|gb|AAP21408.1| putative cell death suppressor protein [Oryza sativa Japonica
Group]
gi|108711643|gb|ABF99438.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113550104|dbj|BAF13547.1| Os03g0805900 [Oryza sativa Japonica Group]
gi|222629206|gb|EEE61338.1| hypothetical protein OsJ_15461 [Oryza sativa Japonica Group]
Length = 525
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 205/530 (38%), Gaps = 75/530 (14%)
Query: 33 SLHSLFFSPL-LKIPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMS 91
SLH L + L L PS PP ISP A + R+ + P V+ ++
Sbjct: 5 SLHLLSLTRLSLPFRDTVTNPSTPRIPPWRRQWISPTDARR-RRLSMP-------VSAVA 56
Query: 92 SSA-VPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQ 150
+ A +P D K E + GE R +DW ++WYP+ +D+ P G V
Sbjct: 57 AEAPLPRAVDEK-------ETPAAGEER---FDWLDQWYPVAPVRDLDKRKPHGKMVMGI 106
Query: 151 QIVLYKDGKG-ELRCHQDRCPHRLAKLSEGQLIDGR--LECLYHGWQFEGEGKCVKIPQL 207
+V++ DG G E R D CPHRLA LSEG+ +DG+ L+C YHGW F+G G C IPQ
Sbjct: 107 SVVVWFDGGGGEWRVVDDACPHRLAPLSEGR-VDGKGCLQCAYHGWCFDGHGSCQFIPQA 165
Query: 208 PA---DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQD 259
PA ACV +Y ++W + + P + L P+ P
Sbjct: 166 PALGPPVHKNSKACVASYPSVVQNNILWFY-PRSEPEYKEILQRKRPPYIRELDDPSSVI 224
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAG--- 316
S + +L Y + L+ + + S + +E P+ + E GF
Sbjct: 225 NSGVRDLLYGYRNYLQAIHK--QLDASMYVCVFEFDQEGGLPIKMNIEELNIAGFHSNPE 282
Query: 317 -QWGREKDGSMPNFLR--FEA-PCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLI 372
WG K + + F A P V Q+N + + K E T +F C P G+ +I
Sbjct: 283 ENWGYFKFIAPVTLIGSPFRAKPVVDQDNNNTNNKKQPE---VTTVFFCIPVSPGRCRVI 339
Query: 373 VRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFL--SSQNEVLLKEKVPTKELYFNLRS 430
G + K+ P W+ H ++V + D L +N K Y S
Sbjct: 340 WANGYNLDGWFDKMIPRWWLHIKTNQVLDSDSSVLHIEERNYAAFGLDNWHKACYVPTSS 399
Query: 431 IDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGT 490
D + +R W K + + LP VE
Sbjct: 400 -DNLIIAFRNWFKKYCNNQVGWLTPMVNQLPPASTRVE---------------------- 436
Query: 491 MHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAG 540
+ RY+ HV+ C C +A+K + +L A+ + G G
Sbjct: 437 -----VYERYWSHVMQCTSCSAALKWMRALEVALQVASVAVVGFLAAGKG 481
>gi|290975135|ref|XP_002670299.1| predicted protein [Naegleria gruberi]
gi|284083856|gb|EFC37555.1| predicted protein [Naegleria gruberi]
Length = 443
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 178/378 (47%), Gaps = 68/378 (17%)
Query: 119 VADYDWTEEWYPLYLTKDVP--DDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKL 176
V + + T WYP+ L+KDV D P + +F + + LY+ G + C +D CPHR AKL
Sbjct: 53 VTNLEMTLFWYPVALSKDVSITDSKPKTIKLFGEPLALYRTSDGNITCVKDLCPHRSAKL 112
Query: 177 SEGQL--IDGR--LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVR--TYEVKESQGV 230
S GQ+ +G+ LEC YHGW+FE EG+CV+IP + ++ + ++ +V E G+
Sbjct: 113 STGQVTEFEGKRSLECAYHGWRFEKEGQCVRIPSVSSERMKGLCSTIKCQAKQVHECCGL 172
Query: 231 VWVWMSQKTPPNPDKLPWFENFARPGFQD--------VSTIHELPYDHSILLENLMDPAH 282
+WV+ + K + +++P E F D + +LP +S +LENL+DPAH
Sbjct: 173 IWVFPNDKVKADINQIP-LELFREEFLTDDSSKLEVLIENTRDLPCHYSFVLENLLDPAH 231
Query: 283 IPISHDRT----------------------DYSAKREDAQPLGFEVTERTDRGFAGQWGR 320
+ +HD T D ++R + + ++ + D F ++ +
Sbjct: 232 LDFTHDGTIGKRSQATQIQSQLVISKDIPSDNPSRRLIPKEMQYDQSIHQD-SFTYRFTK 290
Query: 321 EKDGSMPNF-------LRFEAPCVLQNNRESVDNKTGEKH--YSTGLFLCRPTGQGKSML 371
+ +P L F PC ++ ++ D E+ + +F PTG+G+ +
Sbjct: 291 PEFKKIPGLKSEFMVQLSFIPPCFVR--MDTTDYIANERSGPRMSQVFCLIPTGEGEVKV 348
Query: 372 IVRFGTT-------GTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTK-E 423
I +F ++ P+I+ F ++ +F+QD+ L+ + E V +
Sbjct: 349 IFKFYSSLSILNFLNKIPFIR----NKFAKTVDMIFDQDLELLAG-----VYENVNNGVK 399
Query: 424 LYFNLRSIDTWVAEYRKW 441
++ + + D + YR+W
Sbjct: 400 VFSKIVNADAPIKGYREW 417
>gi|159478286|ref|XP_001697235.1| pheophorbide a oxygenase [Chlamydomonas reinhardtii]
gi|158274709|gb|EDP00490.1| pheophorbide a oxygenase [Chlamydomonas reinhardtii]
Length = 526
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 191/485 (39%), Gaps = 102/485 (21%)
Query: 105 VGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRC 164
V P S + + + Y W +WYP+ +D+ P + + L+KD +G+ R
Sbjct: 8 VVPTSSTSADLDSQDGKYQWHSQWYPVGKVEDLDPRRPHATHLLGIPLALWKDAQGQWRA 67
Query: 165 HQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAK------IPRSA 217
+DRC HRLA LSEG++ DG L+C YHGWQF+G G C IPQL D K R +
Sbjct: 68 VEDRCSHRLAPLSEGRVEKDGTLQCAYHGWQFDGRGACTHIPQLRNDEKAQQVACASRRS 127
Query: 218 CVRTYEVKESQGVVWV--------WMSQKTPPNPDKLPWFEN--FARPGFQDVS-TIHEL 266
CVR Y + + G++WV W TPP+ +L N A P DV + ++
Sbjct: 128 CVRAYPTQVAHGLLWVLPDSSAAGWEKAATPPSTAQLLGGANDDGADP---DVGWYVRDM 184
Query: 267 PYDHSILLENLMDPAHIPISHD------------RT--DYSAKREDAQPLGFEVTERTDR 312
P L+EN+ DP+H+P +H RT D R+ LG+ R
Sbjct: 185 PLRFDTLVENIADPSHVPFAHHGVQVCRLRAGPARTGRDSDHGRQGVAGLGWVQATSGRR 244
Query: 313 GF----AGQWGREKDGSMPNFLRFE---APCVLQ----NNRESVDNKTGEK--------- 352
A GR S P R + LQ + ++ N TG
Sbjct: 245 THPCLCAADHGRAVAASKPQGRRSQEKGTKLTLQDLGPDGFKTPFNMTGADMAVSFTAPS 304
Query: 353 ----HYSTG-----LFLCRPTGQGKSML---IVRFGTTGTSPWIKLFP-----DWYFHQS 395
H ++ + L PT G S L ++ G TS + K+ W H
Sbjct: 305 IVRYHPASSNTPFLILLAVPTRPGWSRLYHGLLNSGRKPTSFFFKILSAIRKIQWADHSF 364
Query: 396 ASK-VFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFG 454
+ + D L Q +LL + K Y+ D V R+W D+ G
Sbjct: 365 LRHPILDGDTYMLHVQERLLLGKNNDWKGSYYMPAPADGAVVGTRRWFDEHG-------- 416
Query: 455 HSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAV 514
VV AG+ ++P + + + RY +H HCK C A+
Sbjct: 417 ----------GVVPTCEAGV------AMPPQ-----LSKRDAIERYHQHTKHCKVCSQAL 455
Query: 515 KAFNT 519
+ T
Sbjct: 456 RNVET 460
>gi|218437959|ref|YP_002376288.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218170687|gb|ACK69420.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 468
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 186/451 (41%), Gaps = 77/451 (17%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
+ + WT++WYP+ + +P +T+ +++V++++ + + D CPH+L +LS+G
Sbjct: 3 SQFSWTKQWYPVMPLSYLDASSPTPITLLGKKLVIWRNERQKWVVMDDYCPHKLMQLSKG 62
Query: 180 QLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVVW 232
+ +G L C +HGW F GEG+C IP L D + ++AC VR Y + QG++W
Sbjct: 63 TITEEGHLMCRHHGWCFNGEGQCTHIPML-GDTQAQQTACNSLKSQVRIYPTQVLQGLLW 121
Query: 233 VWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE--------------LPYDHSILLENLM 278
VW PD+ P F + +TI E +P +++ +E+
Sbjct: 122 VW--------PDESP--TAFEESSTKQPATIPECDPDVCATDWHMSDVPVGYTVSVESTF 171
Query: 279 DPAHIPISHDRTDYSAKREDAQPLGFEVTER--TDRGFAGQWGREK--DGSMPNFLRFEA 334
DP+H H+ + + F V + + GF + G K + M +F
Sbjct: 172 DPSHANFLHEGLGGFSPQTAVPITEFNVVGQISAEDGFTLKHGGYKLDNQDMDATRKFSP 231
Query: 335 PCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTG----TSPWIKLFPD- 389
PC +V T K L+ PT G I +F T G T+ KL P
Sbjct: 232 PCC----NTTVYRYTNGKSLIFQLYFI-PTKPGYCRYIGKFITEGNSQTTNSIFKLLPKD 286
Query: 390 ---WYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAG 446
H K+ +QD+ + SQ + P ++ YF D + +RKW+D+
Sbjct: 287 LRTGLMHLFTYKLGDQDLTAMHSQETIESSLNQPWQKAYFMPSPADVGIVTFRKWLDEFA 346
Query: 447 HGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIH 506
G P + G+ + ++ L +R+ RH H
Sbjct: 347 GGQPAWQGN----------------------------LQKSHKSLSDEQLYDRWHRHTKH 378
Query: 507 CKGCRSAVKAFNTWKNSLSTAAALLTALAIL 537
C CR++V + + + A L L ++
Sbjct: 379 CPSCRNSVIFIEKVQKACNIATIGLVLLTLV 409
>gi|428169222|gb|EKX38158.1| hypothetical protein GUITHDRAFT_50255, partial [Guillardia theta
CCMP2712]
Length = 366
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 167/365 (45%), Gaps = 54/365 (14%)
Query: 127 EWYPLYLTKDVPDDAP-LGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDG 184
+WYP+ KD+ D P + + +V + G C D CPHRLA LSEG++ +G
Sbjct: 4 DWYPVSPAKDLKKDQPNQVVLLGLDLVVWWHQPSGTWSCFADECPHRLAPLSEGRIDKNG 63
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADA-KIPRSACVRTYEVKESQGVVWVW----MSQKT 239
L+C YHGW+F +G C +IPQ D K + AC +Y G++W++ +
Sbjct: 64 NLQCAYHGWEFSEKGSCERIPQDSMDTMKCDKKACATSYP-----GLLWIFPDTDRNLAM 118
Query: 240 PPNPDKLPWFENFARPGFQDVST--IHELPYDHSILLENLMDPAHIPISHDRTDYSAKRE 297
+P +P F++ P F D + + ++PY L+ENL+DP+H+P +H R+
Sbjct: 119 SKSPKIIPQFDD---PAFVDPTNFFMRDVPYGWDTLIENLVDPSHVPFAHH--GLIEARD 173
Query: 298 DAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL---RFEAPCVLQNNRESVDNKTGEKHY 354
+P+ V E + GF G + S + +F PC++ D +
Sbjct: 174 QGRPINLYV-ESHEAGFEGYDMDQNSTSRRCGIVSSKFRPPCLIS------DPEKNSTFL 226
Query: 355 STGLFLCRPTGQGKSMLIV----RFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
G + C PT G S LI RF + +++ P W H S ++V + D FLS
Sbjct: 227 GLGTY-CIPTAPGHSRLITRFPFRFPNQIVANIVRMQPRWMTHLSQNQVIDSDNVFLS-- 283
Query: 411 NEVLLKEKVPTKEL-------------YFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHST 457
LL+ KV Y+ + D V +R+W+ K G G P + G +
Sbjct: 284 ---LLESKVLLPRSSLPLLLLIHIAATYYVPAAADRPVLAFRQWLQKQG-GQPAWLGTPS 339
Query: 458 ISLPK 462
+ LPK
Sbjct: 340 M-LPK 343
>gi|145351277|ref|XP_001420009.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580242|gb|ABO98302.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 668
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 163/379 (43%), Gaps = 67/379 (17%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
Y WT++WYP+ + + + P T+ +V++K+G G +D+CPHRLA LSEG++
Sbjct: 94 YSWTKQWYPVAVVDVLDETKPHPTTLLGIDLVVWKNGDGSWSVFEDKCPHRLAPLSEGRV 153
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPR-SACVRTYEVKE----SQGVVWVW- 234
DG L C YH W+F+G+GKC +PQ + + R A VR+ K +QG+VW W
Sbjct: 154 ESDGTLLCAYHAWRFDGDGKCTSMPQASSAEEEERIKANVRSCAFKRPSMVAQGLVWAWG 213
Query: 235 -------MSQKTPPNPDKLPWFENFARP------GFQDVSTIHELPYDHSILLENLMDPA 281
M P P +P E + GF++ + +LPY + EN +DPA
Sbjct: 214 EGGKDAEMEAAMTP-PLFVPEIEGIGKSGRASCGGFRNHWQVRDLPYGWNAFFENAIDPA 272
Query: 282 HIPISHDRTDYSAKREDAQPLGFE-VTER--TDRGFAGQWGREKDGSMPNF--------- 329
H +SH T ++ +D P GF+ V ER TD AG + D ++P F
Sbjct: 273 HAVVSH-HTLVGSRYDD--PAGFQCVVERPVTD---AGGFRCAIDPAVPPFNSIGKYDAE 326
Query: 330 --LRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIV-----RFGTTGTS- 381
F+ P +L+ + + HY C PT G V R G
Sbjct: 327 TSYDFQPPALLKIDWRHEGGRFLTSHY------CVPTRPGWCRHFVVTIAQRRPEMGNKI 380
Query: 382 ---PWIKL------FPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPT-----KELYFN 427
W KL P W H QDM L Q +++ + K+ F
Sbjct: 381 REHRWFKLNLFTLTSPAWLTHVLGPTFLHQDMVLLHQQEKIIAQGDGQAMAQKWKDQVFT 440
Query: 428 LRSIDTWVAEYRKWMDKAG 446
+ D + KW +K G
Sbjct: 441 PSTADKMTIFFYKWFEKNG 459
>gi|440790930|gb|ELR12190.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 499
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 161/399 (40%), Gaps = 69/399 (17%)
Query: 122 YDWTEEWYPLYLTKDVPDDA---------PLGLTVFDQQIVLYKDGKGELRCHQDRCPHR 172
+D WYP+ ++P A P G + IVL++D G +C QD+C HR
Sbjct: 8 FDMRNHWYPVAFASELPRGAAATGSRPTDPYGFQLLGDPIVLFRDQHGAAQCVQDKCSHR 67
Query: 173 LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
A LS G + DGRLEC +F GKC IP P + + CV Y E +VW
Sbjct: 68 SAPLSVGTVRDGRLEC-----KFGSGGKCESIPSEPT-TRPGKPFCVYAYPTTEVYDLVW 121
Query: 233 VWMSQKTPPNPDKLP--WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
VW + +P F+ + + + + +H + +EN++DP+H+P +HD T
Sbjct: 122 VWPGDPEKASEQHIPHHLFKEYRDKSWGKDTVTRDFDIEHGLFIENILDPSHLPFTHDGT 181
Query: 291 DYSAKREDAQPLGFEV-----------------TERTD----------RGFAGQWGRE-- 321
+KR A + E+ +TD GF G +
Sbjct: 182 --LSKRAKADEMKVEMLFDNVFGQAPAPRSSADDHQTDAHSHFTLGLPEGFYGMQAQAVW 239
Query: 322 -KDGSMP-NFLRFEAPCVLQ-NNRESVDNKTGEKHYST--GLFLCRPTGQGK-------- 368
D S P F+ PCV++ + + S K + Y T L C P +
Sbjct: 240 PADASRPAQRFTFQTPCVVRLDLQTSTTKKRPDGSYPTMIQLHFCVPVSPTRFRVNTIFF 299
Query: 369 SMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNL 428
+F +G P WY A K+ +QD+ L+ Q LL P + +
Sbjct: 300 RNFATKFTASGGFPLGSHLNRWY----ADKIMDQDVELLTGQMVNLLNAAKP----WNTV 351
Query: 429 RSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVV 467
D A YR+W D+A P++ G ++P + ++
Sbjct: 352 VRADKIAARYRRWRDQAELTNPWFCGFHQSAVPDIEDLI 390
>gi|384246692|gb|EIE20181.1| PaO-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 370
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 160/352 (45%), Gaps = 40/352 (11%)
Query: 114 RGERRVADYDWTEE----WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRC 169
R ++ +D D E+ WYP+ + + D A + + +F + VL++D +G C +D C
Sbjct: 1 RNKQLQSDLDLPEQLQDFWYPVAFSSQLKDGAMVTMELFGKPWVLFRDAQGLPSCVKDAC 60
Query: 170 PHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQG 229
HR LS G ++DG ++C YHGWQ++G G C K+P + V T V ES+G
Sbjct: 61 AHRACPLSLGSVVDGCIQCPYHGWQYDGSGNCTKMP----STAFCKGITVSTLPVSESEG 116
Query: 230 VVWVWMSQKTPPNPDKLPWFENFARP--GFQ-DVSTIHELPYDHSILLENLMDPAHIPIS 286
VWVW + P + +P ++ RP GF I E+P +H +LLENL+D AH P +
Sbjct: 117 FVWVWPGRSVPEH--NVP--QHVTRPPDGFTVHAELILEVPVEHGLLLENLLDLAHAPFT 172
Query: 287 HDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN----- 341
H T P+ V R G W P + FE PC++ +
Sbjct: 173 HTST-----FAKGWPVPDVVKFNAARMLGGNW-----EPYPIDMAFEPPCMVLSTIGLAQ 222
Query: 342 ---RESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSA 396
E K++ L +C P G G++ L+ R W K P ++ A
Sbjct: 223 PGKIERGARAASCKNHLHQLHVCLPAGPGRTRLLYRMSMDFLQ-WTKAVPGIQAFWAHIA 281
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
+V +D+ ++ Q + +L+ +++ N + D YR+W + G
Sbjct: 282 KQVMGEDLVLVAGQQDRMLR----GADVWANPVAYDKLGVRYRRWRNSVAAG 329
>gi|218193945|gb|EEC76372.1| hypothetical protein OsI_13975 [Oryza sativa Indica Group]
gi|222626004|gb|EEE60136.1| hypothetical protein OsJ_13023 [Oryza sativa Japonica Group]
Length = 341
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 127/281 (45%), Gaps = 41/281 (14%)
Query: 91 SSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQ 150
S+ A TP H + G ++W ++WYP+ D+ P G V
Sbjct: 54 SAVAAETPPPHARAEEEEEAAPAVGGGEEGRFEWLDQWYPVAPVCDLDPRKPHGKMVMGL 113
Query: 151 QIVLYKDGKG--ELRCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQL 207
++V + DG G E R D CPHRLA LSEG++ GRL+C YHGW F+G G C IPQ
Sbjct: 114 RVVAWFDGGGGGEWRVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQA 173
Query: 208 PA---DAKIPRSACVRTYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFAR 254
PA ACV +Y ++W + + +K PP +F +
Sbjct: 174 PALGPPVHKNSKACVASYPSVVQNNILWFYPRSEPEYKEILQRKRPP------YFPDLDD 227
Query: 255 PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDA--------------- 299
P F V + +L Y + +L+ENLMDPAH+P +H +ED
Sbjct: 228 PSFNTVFGVRDLFYGYDVLVENLMDPAHVPYAHKGLMPIQNKEDPGRYCSTVHLLSTVES 287
Query: 300 -QPLGFEVTERTDRG-FAGQWGREKDGSMPNFLRFEAPCVL 338
Q G+ V RT++ G ++D +++F+APC L
Sbjct: 288 DQEGGYPVKIRTEQAKIDGFLSVQEDDVC--YMKFDAPCTL 326
>gi|302817640|ref|XP_002990495.1| hypothetical protein SELMODRAFT_131716 [Selaginella moellendorffii]
gi|300141663|gb|EFJ08372.1| hypothetical protein SELMODRAFT_131716 [Selaginella moellendorffii]
Length = 491
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 154/345 (44%), Gaps = 47/345 (13%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + + + PL + +F++ VL++ G C D C HR LS G++ DG L+
Sbjct: 153 WYPVAFSACLDSEKPLAIEIFEKNWVLFRGKDGRAGCIHDACAHRACPLSLGKVNDGCLQ 212
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ G C K+P K+ C+ E G+VW+W TP + P
Sbjct: 213 CPYHGWEYATSGSCEKMPSTRFVPTKVKSMPCI------EKDGLVWIWPGSATPESDIPS 266
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
LP ENF I +L +H +L+ENL+D AH P +H T ++ + F
Sbjct: 267 LLP-PENFT----LHAEIILDLEVEHGLLMENLLDLAHAPFTHT-TTFAKGWSVPSSVKF 320
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYST 356
+ T RG+ + P + F PC++ + E D ++ + H
Sbjct: 321 KTPVETLRGYWDPY--------PIDMEFRRPCMVLSTIGLAKPGKLEGSDTQSCKNHLHQ 372
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS-----ASKVFEQDMGFLSSQN 411
L +C P+ +GK+ L+ R + +PW+K P F Q+ A KV ++D+ + Q
Sbjct: 373 -LHVCIPSTRGKTRLLYRM-SLDFAPWLKYVP---FIQTLWVHLARKVLDEDLRLVEGQQ 427
Query: 412 EVLLKEKVPTKELYFNL-RSIDTWVAEYRKWMDKAGHGMPYYFGH 455
E +++ +NL D YRKW H + H
Sbjct: 428 ERMVRGAN-----VWNLPVPYDKLGVRYRKWRVSCEHDHADHHQH 467
>gi|3786324|dbj|BAA33964.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
Length = 463
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 168/370 (45%), Gaps = 39/370 (10%)
Query: 89 DMSSSAVPTPDDHKVLVGPASEEESRGERRVADYD--WTEEWYPLYLTKDVPDDAPLGLT 146
++ S++ TP D A+ SRG + + WYP + +P D +
Sbjct: 82 EVPSTSYGTPVDRAPRRSKAAIRRSRGLESSMEIEEGLRNFWYPAEFSARLPKDTLVPFE 141
Query: 147 VFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 206
+F + V+++D KG+ +D C HR LS G++++G++ C YHGW+F G+G C K+P
Sbjct: 142 LFGEPWVMFRDEKGQPSYIRDECAHRGCPLSLGKVVEGQVMCPYHGWEFNGDGACTKMPS 201
Query: 207 LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARP--GFQDVSTIH 264
P R+ V E G +WVW P + LP +FA+P GF + I
Sbjct: 202 TP----FCRNVGVAALPCAEKDGFIWVWPGDGLP--AETLP---DFAQPPEGFLIHAEIM 252
Query: 265 -ELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKD 323
++P +H +L+ENL+D AH P +H T P+ V ++ +G W
Sbjct: 253 VDVPVEHGLLIENLLDLAHAPFTHTSTFAR-----GWPVPDFVKFHANKALSGFW----- 302
Query: 324 GSMPNFLRFEAPCV------LQNNRESVDNKTGE--KHYSTGLFLCRPTGQGKSMLIVRF 375
P + F+ PC+ L + + T K++ L +C P+ +G + L+ R
Sbjct: 303 DPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTRLLYRM 362
Query: 376 GTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDT 433
+ PW++ P D + Q A++V +D+ + Q + +L+ + N D
Sbjct: 363 -SLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRMLR----GGSNWSNPAPYDK 417
Query: 434 WVAEYRKWMD 443
YR+W +
Sbjct: 418 LAVRYRRWRN 427
>gi|302834209|ref|XP_002948667.1| hypothetical protein VOLCADRAFT_89014 [Volvox carteri f.
nagariensis]
gi|300265858|gb|EFJ50047.1| hypothetical protein VOLCADRAFT_89014 [Volvox carteri f.
nagariensis]
Length = 664
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 191/490 (38%), Gaps = 110/490 (22%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQ 180
D+ WT W+PL + D P +T+ +V+++D G R +DRCPHRLA LSEG+
Sbjct: 92 DFVWTRHWWPLIPVDYLKPDRPNPVTLLGITMVVWRDAGGRWRVFRDRCPHRLAPLSEGR 151
Query: 181 L-IDGRLECLYHGWQFEGEGKCVKIPQ-----LPADAKIPRSACVRTYEVKESQGVVWVW 234
+ DG L C YHGW+F+G G C +IPQ A A R +C Y + ++WVW
Sbjct: 152 VESDGSLSCAYHGWRFDGSGACRRIPQAVDAASEAAACSSRRSCATAYPARVEFNMLWVW 211
Query: 235 MSQKTPPNPD--------KLPWFENFAR---PGFQDVS-TIHELPYDHSILLENLMDPAH 282
+PD +L + R PG + S + +LPY + ILLENL DP+H
Sbjct: 212 PDA----SPDAEAAAAATELVVSNDLRRRDNPGGTNFSWFMRDLPYSYEILLENLTDPSH 267
Query: 283 IPISHDRTDYSAKREDAQPLGFEVTERTDRGFAG--------QWGREKDGSMPNF-LRFE 333
+P SH + R+ + + ++ AG QW R DG P+F F
Sbjct: 268 LPFSHHGHSPALARDKGGAMPMKPSQDVTTAAAGAESPTPPPQWAR-PDG--PDFEFDFR 324
Query: 334 APC-------VLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLI-------VRFG--- 376
V ++ + G + P G+S +RF
Sbjct: 325 GNISPDATISVHMPHQVMYTYRLGPQFQIRMELFAVPVAPGRSRFFSFYSRIPIRFSPQK 384
Query: 377 --TTGTSPWIKLF-----PDWYFHQSASKVFEQDMGFLSSQNEVL--------LKEKVPT 421
T G K P H S ++ + D FLS Q+EV+ + VP
Sbjct: 385 LLTGGVVQAAKYLLYVWDPVVLSHLSTHEILDGDSVFLSVQDEVVQEAEERAAITATVPG 444
Query: 422 KE----------------------------LYFNLRSIDTWVAEYRKWMDKAGHGMPYYF 453
+ LY+ D V R+W+++ G P+
Sbjct: 445 GDPVVTAKDAAAAAANGGGAARSASTLLSRLYYMPAQADAAVQAGRRWIEERAGGAPFRA 504
Query: 454 GHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTM-------HAPN------LANRY 500
+ + + A ++G + +L G +G + AP+ L +RY
Sbjct: 505 RQQQLLAGRAATI---GAATDISGSAETLTTGGLVGLLAADKVPGEAPDPQRRRHLLSRY 561
Query: 501 FRHVIHCKGC 510
+H HC C
Sbjct: 562 EQHTRHCPSC 571
>gi|332529285|ref|ZP_08405248.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Hylemonella
gracilis ATCC 19624]
gi|332041295|gb|EGI77658.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Hylemonella
gracilis ATCC 19624]
Length = 336
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 156/339 (46%), Gaps = 35/339 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
++P+ L +DV + PL + + + +VL++D G+ R DRCPHR A LS G+++DG LE
Sbjct: 7 FHPVALCRDV-HEQPLPVRLLGEDLVLWRDATGQARVFTDRCPHRGAALSMGRVVDGELE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+FE +G+CV IP +P P ++V+E+ G+VWV ++ P ++P
Sbjct: 66 CPYHGWRFEPQGRCVAIPAVPGFTP-PEGHRACAHQVREAYGLVWVCLNPAHTAPPAQVP 124
Query: 248 W-FENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISH-------DRTDYSAK 295
FA ++ + PY+ ++EN +D +H H D T
Sbjct: 125 VPLPAFAAEDDVNLRKVTSGPYEVQASAPRIVENFLDMSHFGFIHTGWLGARDHTAMQPY 184
Query: 296 REDAQPLGFEVTERTDRGFAGQ---WGREKDGSMPNF-LRFEAP--CVLQNNRESVDNKT 349
+ + P G V++ FA Q + G+M + P CVL E+ K
Sbjct: 185 KVEKTPTGIFVSD----CFAWQPQSSVHAQGGAMVEYTYEVAGPYHCVLTKVPEATAVKL 240
Query: 350 GEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSS 409
S LF+C P +S + +R + PD + +F QD L S
Sbjct: 241 ANFRESIALFVC-PVDPERSRVWIRMAMNHSED-----PDQTLIDFQNTIFGQDQPVLES 294
Query: 410 QNEVLL--KEKVPTKELYFNLRSIDTWVAEYRKWMDKAG 446
Q LL E P KE++ + D + YR+++ + G
Sbjct: 295 QRPKLLPISEHAPVKEVH---SAADLASSHYRRYLRELG 330
>gi|428298085|ref|YP_007136391.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
gi|428234629|gb|AFZ00419.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
Length = 500
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 194/449 (43%), Gaps = 71/449 (15%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSE 178
+ ++ WT++WYP+ + P +T+ + +V+++D + + D CPH+LA+LS
Sbjct: 42 MTNFSWTKQWYPVTPISYLEPSHPTAITLLGKNLVIWRDKQQKWVAMDDVCPHKLAQLSL 101
Query: 179 GQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVV 231
G + +G + C +HGW F+G G C IP L +D K +AC + TY + QG++
Sbjct: 102 GSIDKNGNIMCRHHGWCFDGTGTCTNIPML-SDEKALETACKSERSQITTYPTQVLQGLL 160
Query: 232 WVWMSQKTPPNPDKLPWFENFARPGFQDVST-----IHELPYDHSILLENLMDPAHIPIS 286
W+W + +P + + P FQ S+ + E+P +++ E+ DP+H
Sbjct: 161 WIW-ADNSPTAFEDSNLKQPALMPEFQLDSSATDWFMSEVPVGYTVSFESSFDPSHAQFL 219
Query: 287 HDR-TDYSAKREDAQPLG-FEVTER--TDRGF----AGQWGREKDGSMPNFLRFEAPCVL 338
H+ +S +R A P+ FEV+ + GF +G KD M +F PC
Sbjct: 220 HNGIAGFSPER--AIPMEHFEVSGEISAENGFTLKHSGYNIFNKD--MDATRQFTPPCC- 274
Query: 339 QNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP----WIKLFPDW---- 390
N G+ F+ PT G I +F T S W +L P +
Sbjct: 275 --NTTIYKYSNGKSALFQLYFV--PTEPGYCKHIGKFITDTFSQKRNFWFELLPKYLQTG 330
Query: 391 YFHQSASKVFEQDMGFLSSQ--NEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
H S+ K+ QD+ + SQ NE L E P ++ YF D + +RKW+D+ G
Sbjct: 331 LRHSSSYKLSNQDLSMMHSQAMNESL--EDKPWQKSYFMPSLADIGIVTFRKWLDEFAGG 388
Query: 449 MPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCK 508
P + G + +VP + L + + RH HC
Sbjct: 389 KPAWQG-----MKEVP-----------------------FQELSDEQLYDIWHRHTKHCP 420
Query: 509 GCRSAVKAFNTWKNSLSTAAALLTALAIL 537
CR ++ + K+ A+L L +L
Sbjct: 421 SCRQSLVLIDKVKDYCQNFTAVLAILGLL 449
>gi|303272767|ref|XP_003055745.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226463719|gb|EEH60997.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 582
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 185/480 (38%), Gaps = 113/480 (23%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQ 166
P +E + E +DW + WYP+ + P + V + +V +K G
Sbjct: 70 PETESSATNETSAYQFDWAKAWYPMSPIAFLDPTIPNPMKVLGKSLVAWKSEDGTWSVAN 129
Query: 167 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVR----- 220
D CPHR+A LS G L + +L C YHGW+F G+G+ ++P + DAK R+AC
Sbjct: 130 DECPHRMAPLSMGFLSETNQLVCRYHGWEFNGKGEATRVP-MSVDAKAERTACASPRGCA 188
Query: 221 -TYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSIL------ 273
+Y VKE GV+WVW P P W E A P + + +LP D ++
Sbjct: 189 VSYPVKEQSGVLWVW------PTPGADAWLEASAVPVATEAAEFGDLPGDWGMVELPVGY 242
Query: 274 ---LENLMDPAHIPISHDRTD-YSAKREDAQPLGFEVTERTDR--------GFAGQWG-- 319
LEN DP+H H + D + + + FE R + GF Q G
Sbjct: 243 APALENQFDPSHAEWLHAKYDEITGGLSETMNVKFEPMTRFNVKEGSMNKIGFIVQHGGY 302
Query: 320 --REKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFG- 376
KD S F APC ++R + +G ++ S + L PT G+ ++ +F
Sbjct: 303 NAGNKDVSAERL--FTAPC---SSRSEYKDASGNRYLSAAI-LYTPTEPGRCLMFTKFQA 356
Query: 377 --------------TTG-------TSPWIKLFPDWY-------------------FHQSA 396
TTG ++P F WY + +A
Sbjct: 357 HTRRAVQGAGGKKITTGDRVNALLSAPAQNAF-RWYMEFMVKDPALVRVGLNHGVYGNAA 415
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK-AGHGMPYYFGH 455
+ +QD+ + + + K+ Y+ D VA +RKWMD AG G+ + G
Sbjct: 416 YTLGDQDIQAMHGVEVAMESREKSWKQSYYLPSPSDAGVAGFRKWMDDHAGGGVRWAEGV 475
Query: 456 STISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVK 515
KV + + RY RH HC+ C+ +K
Sbjct: 476 RD-DASKVKPIAQR---------------------------LERYERHTRHCRHCKETLK 507
>gi|302804017|ref|XP_002983761.1| hypothetical protein SELMODRAFT_118803 [Selaginella moellendorffii]
gi|300148598|gb|EFJ15257.1| hypothetical protein SELMODRAFT_118803 [Selaginella moellendorffii]
Length = 481
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 41/305 (13%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + + + PL + +F++ VL++ G C D C HR LS G++ DG L+
Sbjct: 153 WYPVAFSACLDSEKPLAIEIFEKNWVLFRGKDGRAGCIHDACAHRACPLSLGKVNDGCLQ 212
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ G C K+P K+ C+ E G+VW+W TP + P
Sbjct: 213 CPYHGWEYATSGSCEKMPSTRFVPTKVKSMPCI------EKDGLVWIWPGSATPESDIPS 266
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
LP +NF I +L +H +L+ENL+D AH P +H T ++ + F
Sbjct: 267 LLP-PDNFT----LHAEIILDLEVEHGLLMENLLDLAHAPFTH-TTTFAKGWSVPSSVKF 320
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYST 356
+ T RG+ + P + F PC++ + E D ++ + H
Sbjct: 321 QTPVETLRGYWDPY--------PIDMEFRRPCMVLSTIGLAKPGKLEGSDTQSCKNHLHQ 372
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS-----ASKVFEQDMGFLSSQN 411
L +C P+ +GK+ L+ R + +PW+K P F Q+ A KV ++D+ + Q
Sbjct: 373 -LHVCIPSTRGKTRLLYRM-SLDFAPWLKYVP---FIQTLWVHLARKVLDEDLRLVEGQQ 427
Query: 412 EVLLK 416
E +++
Sbjct: 428 ERMVR 432
>gi|409096514|ref|ZP_11216538.1| Rieske (2Fe-2S) domain-containing protein [Thermococcus zilligii
AN1]
Length = 319
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 154/341 (45%), Gaps = 37/341 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ + +K+V D P+G+ F + IVL++D G++ +D C HR A+LS G++I+GRL+
Sbjct: 2 WFAILSSKEVRKDRPVGVVRFGRNIVLWRDENGKVNAIEDSCVHRRARLSAGKVINGRLQ 61
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG++++G+G+ IP L ++P V+ Y V E G++W+W + P +
Sbjct: 62 CPFHGFEYDGDGRVKLIPALGRSYRVPERFSVKAYNVAEKAGMIWMWFGEGEPGGEPRF- 120
Query: 248 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRE--------- 297
FE+ + ++ +P+ ++ EN +D H+P H T R
Sbjct: 121 -FEDIDKKFACAEIQETWNVPFPRAV--ENQLDVMHLPFVHRTTIGRGNRTLVNGPVVKW 177
Query: 298 -DAQPLGFEVTERTDRGFAGQWGREKDGSMPN-FLRFEAPCVLQNNRESVDNKTGEKHYS 355
D F V DRG + E +G +L F P V QN+ EK
Sbjct: 178 IDGDSFVFYVFNEVDRGQIAKKPGELEGLESRVYLEFIFPNVWQNH-------ISEKVRV 230
Query: 356 TGLFLCRPTGQGKSMLIVRF--GTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEV 413
F+ P + K+M+ +RF TG P +L + V QD + +Q
Sbjct: 231 VAFFV--PVTKEKTMIYLRFYIKATGIRPLDRLIAKLGMRFNKV-VLHQDRRVVETQEWD 287
Query: 414 LLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFG 454
+ K+ +L D + E+RK + + + + FG
Sbjct: 288 IRKD---------SLVQGDLPIMEFRKRLYREKKLVEFLFG 319
>gi|416409232|ref|ZP_11688442.1| Pheophorbide a oxygenase, partial [Crocosphaera watsonii WH 0003]
gi|357260669|gb|EHJ10049.1| Pheophorbide a oxygenase, partial [Crocosphaera watsonii WH 0003]
Length = 226
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQDRCPHRLAKLSEGQ 180
+DW E WYP++ +D+ P T+ ++ IV++ + K + +D+CPHRLA LSEG+
Sbjct: 27 FDWQEVWYPVHYVEDLDKTRPTAFTLLEKNIVIWWEEKNNQWSVFEDQCPHRLAPLSEGR 86
Query: 181 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 237
+ + G LEC YHGW F G+G C IPQ K +S A V+T + QG+++V+ +
Sbjct: 87 INESGCLECPYHGWAFSGQGNCEIIPQQHPTGKAEKSLRASVKTLPTQVRQGLLFVYAGK 146
Query: 238 KTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
+P + + V +T +LPYD L+EN++D +HIP +H ++
Sbjct: 147 PENAEITPIPLVDVLEEDSDEWVCLNTFRDLPYDALTLMENVLDSSHIPYTHHKS--VGN 204
Query: 296 REDAQPLGFEVTERTDRGFAG 316
R + P+ EV E GF G
Sbjct: 205 RANVSPVELEVIESGKWGFKG 225
>gi|308808800|ref|XP_003081710.1| cell death suppressor protein (ISS) [Ostreococcus tauri]
gi|116060175|emb|CAL56234.1| cell death suppressor protein (ISS) [Ostreococcus tauri]
Length = 664
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 155/377 (41%), Gaps = 63/377 (16%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
Y WT++WYP+ + + + P + +V++K+G G +D+CPHR+A L+EG++
Sbjct: 87 YSWTKQWYPVAVCDVLDETKPHATQLLGVDLVVWKNGTGTWSVFEDKCPHRMAPLTEGRV 146
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLP-----ADAKIPRSACVRTYEVKESQGVVWVW- 234
DG L C YH W+F+G+G C +PQ A K +C +QG+VW W
Sbjct: 147 ESDGTLLCAYHAWRFDGDGNCTAMPQASSAEEEARVKANEKSCAFKRPSMVAQGLVWAWG 206
Query: 235 --------MSQKTP----PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
S TP P D + A GF++ + +LPY + EN +DPAH
Sbjct: 207 ESGPEAEMESAMTPPLLVPEIDGIGKSGRAACGGFRNHWQVRDLPYGWNAFFENAIDPAH 266
Query: 283 IPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF-----------LR 331
+SH T ++ +D P GF+ AG + D ++P F
Sbjct: 267 AVVSH-HTLVGSRYDD--PAGFQCVVERPVTSAGGFRCAIDPAVPPFNTIGKYDAETSYD 323
Query: 332 FEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIV-----RFGTTGTS----P 382
F+ P +L+ + + HY C PT G V R G +
Sbjct: 324 FQPPALLKIDWRHEGGRFLTSHY------CTPTRPGWCRHFVVTIAQRRHEKGDAIRQHR 377
Query: 383 WIKL------FPDWYFHQSASKVFEQDMGFLSSQNEVL-------LKEKVPTKELYFNLR 429
W KL P W H QDM L Q +++ L EK KE F
Sbjct: 378 WFKLNLFTLTSPAWLTHVLGPTFLHQDMVLLHQQEKIIAQGEGQKLAEK--WKEQVFTPT 435
Query: 430 SIDTWVAEYRKWMDKAG 446
+ D + KW ++ G
Sbjct: 436 TADKMTIFFYKWFERNG 452
>gi|255071573|ref|XP_002499461.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226514723|gb|ACO60719.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 609
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 199/529 (37%), Gaps = 128/529 (24%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+DW WYP+ + D AP + V + IV +K G +D CPHR+A LS G +
Sbjct: 112 FDWARAWYPMSPIDFLDDTAPNPMKVLGKSIVAWKGEGGAWAVVEDSCPHRMAPLSLGFI 171
Query: 182 I-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA------CVRTYEVKESQGVVWVW 234
D ++ C YHGW+F +GK IP + DAK ++A C +Y VKE GV+WVW
Sbjct: 172 SEDKQIVCRYHGWEFGNDGKATAIP-MSTDAKAEKTACESPRSCAVSYPVKEEAGVLWVW 230
Query: 235 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSIL---------LENLMDPAHIPI 285
P W E A P + ELP + ++ LEN DP+H
Sbjct: 231 ------PTAGADAWLEASATPVATAAAEFGELPGEWGMVELPVGYAPALENQFDPSHAEW 284
Query: 286 SHDRTDYSAKREDA------QPLG-FEVTERT--DRGF----AGQWGREKDGSMPNFLRF 332
H + + + D +P+ F V E T GF G KD S F
Sbjct: 285 LHAKYNAESGLLDGAMNVAYEPMTRFNVKEGTMGAGGFTVEHGGYNAGNKDVSAERL--F 342
Query: 333 EAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRF--------------GTT 378
APC ++R + G ++ S + L PT G+ ++ +F T
Sbjct: 343 TAPC---SSRSEYKDANGNRYLSAAI-LYTPTEPGRCLMFTKFQAHTRKAVQGAGKAKVT 398
Query: 379 GTSPWIKLFP-------DWY-------------------FHQSASKVFEQDMGFLSSQNE 412
W + WY + A + +QD+ +
Sbjct: 399 AGDRWRGILESPAKTAFQWYMEFVAKDPELCRIGLQHGVYGAGAYTLGDQDIQAMHGVEV 458
Query: 413 VLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK-AGHGMPYYFGHSTISLPKVPAVVEHAP 471
+ + K+ Y+ D VA +R WMDK AG G+ + G P
Sbjct: 459 AMESAERDWKKSYYLPTPSDAGVAGFRTWMDKHAGGGVKWADGTRDDESKMKP------- 511
Query: 472 AGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLST----- 526
++ L RY RH HC+ C++A++ + L
Sbjct: 512 ------IAQRL---------------ERYERHTRHCRYCKAALRELGVLEERLVDFSNAM 550
Query: 527 -AAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIR 574
AA L+ L G++ A SLCLAG +++N T +R
Sbjct: 551 LAAGLVFGLGGAVVGQEGPAVV----SLCLAG-------LAVNATESVR 588
>gi|295702951|ref|YP_003596026.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium DSM
319]
gi|294800610|gb|ADF37676.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium DSM 319]
Length = 335
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 152/342 (44%), Gaps = 38/342 (11%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSE 178
+ D +EW P + DV D PL +T+ ++++VL++ ++ +D C HR A LS
Sbjct: 2 IKDLVLAKEWLPAAYSHDVTDQ-PLQVTILEERVVLFRTTNA-IKAFKDLCIHRGAALSL 59
Query: 179 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK 238
G+++D + C YHGW+++ G CVKIPQ P IP A + Y+ E G++WV M+ +
Sbjct: 60 GKVVDDCIVCPYHGWKYDDAGACVKIPQQPPGRAIPSKAKAQVYDCVEKYGIIWVKMNSE 119
Query: 239 TPPNPDKLPWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRT------- 290
P LP ++ GF+ V ++ H L ++EN +D +H+ H+ +
Sbjct: 120 AGDTP--LPLYDEHLNSGFKTVCASPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSDYA 177
Query: 291 ---DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDN 347
DY +D + + E+ D G + + FE + V++
Sbjct: 178 EIPDYKVHWKDNRYVSDEIAVYADADGTGNFAT-------IYYTFEILRPTVARLKKVNH 230
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFL 407
+TGE + LF P + KS + + PD YF + EQD +
Sbjct: 231 ETGE--IFSMLFAVLPEEERKSTVFALVSRNYSFDA----PDQYFRDFQQLIIEQDTSIV 284
Query: 408 SSQNEVLLKEKVPTK---ELYFNLRSIDTWVAEYRKWMDKAG 446
SQ E++P EL+ N D YR+W+ G
Sbjct: 285 ESQK----PEELPLDLQAELHLN---PDRLSIAYRRWLGDLG 319
>gi|307110739|gb|EFN58974.1| hypothetical protein CHLNCDRAFT_137589 [Chlorella variabilis]
Length = 510
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 178/443 (40%), Gaps = 62/443 (13%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL-YKDGKGELRCHQDRCPHRLAKLSEG 179
++W ++WYPL + P TV +++V+ Y + R +DR PHRL LSEG
Sbjct: 19 QFNWQQQWYPLAPVSYLDRAKPTPYTVLGRRLVVWYHAPSQQWRALEDRWPHRLVPLSEG 78
Query: 180 QL--IDGRLECLYHGWQFEGEGKCVKIPQL-----PADAKIPRSACVRTYEVKESQGVVW 232
++ G L+C YHGWQF G+G+C +IPQ A A + +CV + V++ QG++W
Sbjct: 79 RIEPGSGNLQCSYHGWQFGGDGRCARIPQADSPQQEAAACGSQRSCVAAFPVRQEQGMLW 138
Query: 233 VWM---------SQKTP-PNP-DKLPWFENFARPGFQDVSTIH--ELPYDHSILLENLMD 279
VWM SQ P P P + L + A P + + ELP LLENL+D
Sbjct: 139 VWMEAGPGAAAASQLRPLPLPAELLSSGGDGATPAGSLLGGWYQRELPLSAEYLLENLLD 198
Query: 280 PAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGRE------KDGSMPNFLRFE 333
P+HI +H S R + PL + GF R+ + G E
Sbjct: 199 PSHIHFAHSGVIGSPSRAGSIPLHLAGPLTSQGGFQLHMDRQWQGRAGRQGGRGQQQARE 258
Query: 334 APCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIK-------L 386
P ++ + +G T G S + F TG P ++ L
Sbjct: 259 IPGLVDVGEAAPAGGSGSVPAVTRFVPPGLVCPGTSRVFTAFFATGLPPVLQSALRSDAL 318
Query: 387 FPDWYFHQ-----SASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKW 441
P + Q A +V + D + Q + +E + YF + D V +W
Sbjct: 319 APLLHAFQFLADLGAHQVIDGDAVHIHQQERTVRQEG---RRSYFMPAAADRGVMLLHRW 375
Query: 442 MDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYF 501
+D+ G P YF + + A + + +RY
Sbjct: 376 LDEYAGGGPQYFPGPGAASSGMGAAASK--------------------PLSRQEVLDRYE 415
Query: 502 RHVIHCKGCRSAVKAFNTWKNSL 524
+H HC CR A+ + + + +L
Sbjct: 416 QHTKHCPSCRQALSSVRSLRQAL 438
>gi|358455131|ref|ZP_09165359.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357081384|gb|EHI90815.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 367
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 113 SRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHR 172
S G R A+ WYP+ D+ APL + +VL++D +G C DRCPHR
Sbjct: 5 SEGMRVTAEPLLRHYWYPVAFASDL-GGAPLARRLLGTDVVLWRDAEGRPACAADRCPHR 63
Query: 173 LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
AKLS G DG + C YHGW++ +GKCV IPQ +I A V TY V E+ G++W
Sbjct: 64 DAKLSRGWTEDGAVVCPYHGWRYGSDGKCVLIPQNAPGQRISPRAVVATYPVTEALGLLW 123
Query: 233 VWMSQKTPPNPDK--LPWFENFARPGFQDVSTIHEL-PYDHSILLENLMDPAHIPISHDR 289
V + + P +P F +PG++ V + P LL+N +DPAHI H R
Sbjct: 124 VCLDPASEPATAMAGIPAIPQFGQPGWRVVQEFDTVWPCSAPHLLDNNLDPAHIAFVHRR 183
Query: 290 T 290
T
Sbjct: 184 T 184
>gi|427739078|ref|YP_007058622.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374119|gb|AFY58075.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 459
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 191/453 (42%), Gaps = 82/453 (18%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQ 180
++ WT++WYP+ + P +T+ +++V+++D + D CPH+LA+LS G
Sbjct: 3 NFSWTKQWYPITPVSYLELLKPTPITLLGKKLVIWRDKHQQWIVMDDACPHKLAQLSLGS 62
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVVWV 233
+ DG L C +HGW F+G GKC IP L +D K +AC V TY +E QG++WV
Sbjct: 63 INEDGNLMCRHHGWCFDGMGKCTNIPML-SDEKALETACNSEKSKVTTYPTQELQGLLWV 121
Query: 234 WMSQK-------TPPNPDKLPWFENFARPGFQDVST----IHELPYDHSILLENLMDPAH 282
W T P +P ++ D S+ + E+P +++ +E+ DP+H
Sbjct: 122 WADNSSTAFEDCTLKQPATIPEYK-------LDTSSNDWFMSEVPVGYTVSVESTFDPSH 174
Query: 283 IPISHDR-TDYSAKREDAQPLGFEVTE--RTDRGF----AGQWGREKDGSMPNFLRFEAP 335
H+ +S R A FE + GF +G KD M F P
Sbjct: 175 AQFLHEGIAGFSPARAIAMK-EFEAVGGISAEDGFTLKHSGYNIFNKD--MDATRNFHPP 231
Query: 336 CVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP-----WIKLFPDW 390
C E + K+ H L+ P G I +F + P W++L P +
Sbjct: 232 CSNTTIYEYPNGKSALFH----LYFV-PIKPGYCRHIGKFISDAIPPQKGNFWMELLPKY 286
Query: 391 YF----HQSASKVFEQDMGFLSSQ--NEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
H ++ K+ QD+ + SQ NE + +K+ K YF DT + +RKW+D+
Sbjct: 287 LQTGLKHSASYKLANQDLSMMHSQAVNES-MGDKIWQKS-YFMPSLADTGIVTFRKWLDE 344
Query: 445 AGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHV 504
G P + V+ P + L + + RH
Sbjct: 345 FAGGKPEW------------QQVKETP----------------FQELSDEKLYDIWHRHT 376
Query: 505 IHCKGCRSAVKAFNTWKNSLSTAAALLTALAIL 537
HC CR ++ + K+ + A L LA++
Sbjct: 377 KHCPSCRQSLVFIDKVKDLCQSLTAALVILALV 409
>gi|384048602|ref|YP_005496619.1| Ring-hydroxylating dioxygenase, large terminal subunit [Bacillus
megaterium WSH-002]
gi|345446293|gb|AEN91310.1| Ring-hydroxylating dioxygenase, large terminal subunit [Bacillus
megaterium WSH-002]
Length = 337
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 38/344 (11%)
Query: 117 RRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKL 176
+ + D +EW P + D+ D PL +T+ ++++ L++ ++ +D C HR A L
Sbjct: 2 QMIKDLVLAKEWLPAAYSHDLTDQ-PLQVTILEERVALFRTTNA-IKAFKDLCIHRGAAL 59
Query: 177 SEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS 236
S G+++D + C YHGW+++ G CVKIPQ P IP A + Y+ E G++WV M+
Sbjct: 60 SLGKVVDDCIVCPYHGWKYDEAGACVKIPQQPPGRAIPSKAKAQVYDCVEKYGIIWVKMN 119
Query: 237 QKTPPNPDKLPWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRT----- 290
+ P LP ++ + PGF+ V + H L ++EN +D +H+ H+ +
Sbjct: 120 SEASDTP--LPQYDEYLNPGFKTVCANPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSD 177
Query: 291 -----DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESV 345
DY +D + + E+ D G + + FE + V
Sbjct: 178 YAEIPDYKVHWKDNRYVSDEIAVYADADGTGNFAT-------IYYTFEILRPTVARLKKV 230
Query: 346 DNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMG 405
+ +TGE + LF P + KS + + PD YF + EQD
Sbjct: 231 NYETGEIF--SMLFAVLPEEERKSTVFALVSRNYSFDE----PDQYFRDFQQLIIEQDTS 284
Query: 406 FLSSQNEVLLKEKVPTK---ELYFNLRSIDTWVAEYRKWMDKAG 446
+ SQ E++P EL+ N D YR+W+ G
Sbjct: 285 IVESQK----PEELPLDLQAELHLN---PDRLSIAYRRWLGDLG 321
>gi|440790926|gb|ELR12186.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 306
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 122 YDWTEEWYPLYLTKDVPDDA---------PLGLTVFDQQIVLYKDGKGELRCHQDRCPHR 172
+D WYP+ ++P A P G + IVL++D G +C QD+C HR
Sbjct: 8 FDMRNHWYPVAFASELPRGAAATGSRPTDPYGFQLLGDPIVLFRDQHGAAQCVQDKCSHR 67
Query: 173 LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
A LS G + DGRLEC YHGWQF GKC IP P + + CV Y E +VW
Sbjct: 68 SAPLSVGTVRDGRLECKYHGWQFGSGGKCESIPSEPT-TRPGKPFCVYAYPTTEVYDLVW 126
Query: 233 VWMSQKTPPNPDKLP--WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
VW + +P F+ + + + + H + +EN++DP+H+P +HD T
Sbjct: 127 VWPGDPEKASEQHIPHHLFKEYRDKSWGKDTVTRDFDIGHGLFIENILDPSHLPFTHDGT 186
Query: 291 DYSAKREDAQPLGFEV 306
+KR A + E+
Sbjct: 187 --LSKRAKADEMKVEM 200
>gi|303271473|ref|XP_003055098.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226463072|gb|EEH60350.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 662
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 164/384 (42%), Gaps = 79/384 (20%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
++WT++WYP+ + + P + +V+++DG G +D+CPHRLA LSEG++
Sbjct: 95 FNWTKQWYPVAVIDLIDATKPHPTQLLGVDLVVWRDGDGRWSAFEDKCPHRLAPLSEGRV 154
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPR-----SACVRTYEVKESQGVVWVW- 234
DG L C YH W+F+ +GKC +PQ + + R +C E+QG+VW W
Sbjct: 155 EDDGTLLCAYHAWRFDADGKCADMPQASSREEEERVKSNPRSCAFARPTMEAQGLVWAWG 214
Query: 235 --------MSQKTPP--NPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMDPAH 282
++ TPP P+ +N PG +++ + ++PY + EN +DPAH
Sbjct: 215 EGGKEAEIEARMTPPLLVPEIEGVGKNGEAPGGAYRNHWQVRDMPYGWAAFFENAIDPAH 274
Query: 283 IPISHDRTDYSAKREDAQPLGFE-VTERTDRGFAGQWGREKDGSMPNF-----------L 330
+SH T ++ +D P GF+ V ER AG + D ++P F
Sbjct: 275 AVVSH-HTLVGSRYDD--PAGFKCVVERPMTAEAG-FRCALDPAVPPFNTIGKYDAETSY 330
Query: 331 RFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT---------------GQGKSMLIVRF 375
F+ PC+L+ + + HY C PT G+G+S+ R
Sbjct: 331 DFQPPCLLKIDWRHEQARFLTSHY------CVPTRPGWCRHFVATVCQRGEGESVRQHR- 383
Query: 376 GTTGTSPWIKL------FPDWYFHQSASKVFEQDMGFLSSQNEVL-------LKEKVPTK 422
W KL P W H QDM L Q +++ L EK K
Sbjct: 384 -------WFKLNLFTLTSPAWMTHVLGPTFLHQDMVLLHQQEKIIANGDGQALAEK--WK 434
Query: 423 ELYFNLRSIDTWVAEYRKWMDKAG 446
+ F D + +W K G
Sbjct: 435 DQVFIPTGADKMTVMFYQWFGKHG 458
>gi|62946445|ref|YP_227649.1| hypothetical protein all7348 [Nostoc sp. PCC 7120]
gi|17134547|dbj|BAB77106.1| all7348 [Nostoc sp. PCC 7120]
Length = 460
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 186/435 (42%), Gaps = 76/435 (17%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
++ W ++WYP+ T + P +T+ +++V+++D D CPH+LA+LS G
Sbjct: 3 TNFSWIKQWYPITPTSYLEPSYPTPITLLGKKLVVWQDKDHTWVVMDDVCPHKLAQLSLG 62
Query: 180 QL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVVW 232
+ DG L C +HGW F+G GKC IP L D + +AC V TY + QG++W
Sbjct: 63 NINQDGNLMCRHHGWCFDGAGKCTNIPML-NDPQALMNACSSQRSQVTTYPTQVLQGLLW 121
Query: 233 VWMSQKTPPNPDKLPWFENFARPGFQDVSTI---------HELPYDHSILLENLMDPAHI 283
VW P+ + ++ +P TI E+P +++ +E+ DP+H
Sbjct: 122 VW------PDNSSTAFADSALKPPALMPDTIGSSMSDWFMSEVPVGYTVCVESSFDPSHA 175
Query: 284 PISHDR-TDYSAKREDAQPL-GFEVTER--TDRGF----AGQWGREKDGSMPNFLRFEAP 335
H+ +S +R A P+ FEV + + GF +G KD M RF P
Sbjct: 176 QFLHEGIAGFSPQR--AIPIENFEVMGKMSAEDGFILKHSGYNVFNKD--MDATRRFTPP 231
Query: 336 CVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSM--LIVRFGTTGTSPWIKLFPDW--- 390
C +N G+ F+ G K + I + + W + P +
Sbjct: 232 C---SNTTIYKYSNGKSAIFQLYFVPTKPGYCKQIGKFIADIPSQKRNFWFQSLPTYLQT 288
Query: 391 -YFHQSASKVFEQDMGFLSSQ--NEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGH 447
H S+ K+ QD+ + SQ NE L E P ++LYF DT + +RKW+D+
Sbjct: 289 GLNHSSSYKLSNQDLSMMHSQTINESL--ENKPWQKLYFLPSVADTGIVTFRKWLDEFAG 346
Query: 448 GMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHC 507
G P + G + + P +G + L + + RH HC
Sbjct: 347 GKPEWQGVTEV------------------------PFQG----LSDEQLYDIWHRHTKHC 378
Query: 508 KGCRSAVKAFNTWKN 522
CR ++ + K+
Sbjct: 379 PSCRQSLVLIDKVKD 393
>gi|308812898|ref|XP_003083756.1| unnamed protein product [Ostreococcus tauri]
gi|116055637|emb|CAL58305.1| unnamed protein product [Ostreococcus tauri]
Length = 523
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 138/528 (26%), Positives = 207/528 (39%), Gaps = 105/528 (19%)
Query: 99 DDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG 158
DD SE+ +RG+ +DW WYPL T + D P L V +++V Y D
Sbjct: 3 DDVASSTTSVSEQATRGDGE--SFDWFSAWYPLRPTSFLDPDEPNELRVLGKKLVAYLDP 60
Query: 159 K-GELRCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEG-EGKCVKIPQLPADA---- 211
GE R +D CPHR A LS G + DG L C YHGW F+G +GKCV IP +A
Sbjct: 61 TCGEWRVLEDSCPHRRAPLSLGYVQRDGALACRYHGWAFDGKDGKCVAIPMSVDEAAEKT 120
Query: 212 --KIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDKLPWFENFARPG-FQDVSTIHEL 266
PRS C +Y + G++WVW + + A G + EL
Sbjct: 121 ACASPRS-CATSYPCRVEDGILWVWPTSGADAALLSATTACATSLAAEGTLPGEWGMVEL 179
Query: 267 PYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF-EVTERTDR-------GFA--- 315
P ++ LEN DP+H H + D + + + GF +T+ + R GF
Sbjct: 180 PVGYAPALENQFDPSHAEWLHAKYDENGQLSEKDNAGFVPMTDFSLRAETMNKDGFVVDH 239
Query: 316 GQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRF 375
G + + G + + F APC + E +D K G K+ S + L PT G++++ +F
Sbjct: 240 GGYNKSNVGVTASRV-FTAPC--SSRSEYLDAK-GRKYLSAAI-LYAPTEPGRTLMFTKF 294
Query: 376 -----------GTTGTSPWIKL----------FPDWYFH--------------------Q 394
G SP +L D+Y
Sbjct: 295 QAHQSGAVQGAGARKVSPVDRLNALITAPAKGLFDFYLDTFTSDPKLVRVGLSHGSPPGS 354
Query: 395 SASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFG 454
+A + +QD+ + + + P K+ Y+ D V+ +R WMD
Sbjct: 355 NAYYLGDQDILAMHGVEVEMELQNKPWKQSYYLPTPADAGVSTFRNWMDT---------- 404
Query: 455 HSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAV 514
H+ + P VV+ A +RY RH HC C++A+
Sbjct: 405 HAGGKVRWAPGVVDDASK-----------------VKSEAEQFDRYHRHTKHCVACKTAL 447
Query: 515 KAFNTWKNSLSTAAALLTA----LAILGAGRQWRAFCLVSASLCLAGV 558
+ A+ L A LA+ GA +A ++A CLAG
Sbjct: 448 NELGVLEERCMLASKALLASGLFLAVTGAAFDQQAPATIAA--CLAGA 493
>gi|224075986|ref|XP_002304860.1| predicted protein [Populus trichocarpa]
gi|222842292|gb|EEE79839.1| predicted protein [Populus trichocarpa]
Length = 267
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 95/191 (49%), Gaps = 15/191 (7%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCH 165
PA E +S+ E +DW +WYP+ D+ P V +V++ D + E +
Sbjct: 70 PALETDSQQET----FDWYAQWYPVMPVCDLDKREPHAKKVMGLDLVVWWDRNENEWKVF 125
Query: 166 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRT 221
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV
Sbjct: 126 DDTCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKACVAA 185
Query: 222 YEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLEN 276
Y +VW W +P D L P+ P + E P+ + IL+EN
Sbjct: 186 YPTTVQNDIVWFW-PNSSPEYKDILSSKKPPYIAELDDPSYIKTMGNREFPFGYEILIEN 244
Query: 277 LMDPAHIPISH 287
L+DPAH+P +H
Sbjct: 245 LVDPAHVPYAH 255
>gi|209524279|ref|ZP_03272829.1| Rieske (2Fe-2S) domain protein [Arthrospira maxima CS-328]
gi|423066784|ref|ZP_17055574.1| Rieske domain protein [Arthrospira platensis C1]
gi|209495370|gb|EDZ95675.1| Rieske (2Fe-2S) domain protein [Arthrospira maxima CS-328]
gi|406711809|gb|EKD07008.1| Rieske domain protein [Arthrospira platensis C1]
Length = 347
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 109/191 (57%), Gaps = 9/191 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +++V +P+G+ +++Q IVL++D +G++ +DRCPHR KLS G+ I +E
Sbjct: 21 WYVVSSSQEVTS-SPVGVILWNQPIVLFRDTQGKINALEDRCPHRQVKLSHGKAIGDEIE 79
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-PDKL 246
C YHGW+F G G CV +P L + K P+ ++TY V+E G +W+++ ++ P N P ++
Sbjct: 80 CTYHGWRFNGGGDCVYVPYLQENQKPPKCG-IKTYPVRELYGFIWIFIGEEKPDNEPLEI 138
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P +E+ V+TIH + +S L+ENLMD H H ++ A E E
Sbjct: 139 PEWEHLNY--IATVATIHTQAH-YSFLVENLMDMYH---GHLHQNWQAWTEAQLDYITET 192
Query: 307 TERTDRGFAGQ 317
+ D + Q
Sbjct: 193 DNKVDAYYEAQ 203
>gi|119491090|ref|ZP_01623248.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
gi|119453635|gb|EAW34795.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
Length = 343
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 98/156 (62%), Gaps = 6/156 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V PLG+T+++Q I+L++D +G+++ +DRCPHR KLS G++I G +E
Sbjct: 17 WYVVARSNEVKTQ-PLGVTLWNQPIILFRDSQGKIQALEDRCPHRQVKLSHGKIIAGLIE 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK-TPPNPDKL 246
C YHGWQF +G+CVKIP L + K+P +R Y V+E G +W+++ + T P +
Sbjct: 76 CAYHGWQFNTQGQCVKIPYLAENQKLPNCQ-IRNYPVQELDGFIWLFLGENSTQTQPLGV 134
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
P +++ VS IH + +S ++ENLMD H
Sbjct: 135 PEWDHLNYIA--TVSLIHCQAH-YSFVIENLMDMYH 167
>gi|427720732|ref|YP_007068726.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 7507]
gi|427353168|gb|AFY35892.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 7507]
Length = 353
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 138/309 (44%), Gaps = 29/309 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V + P G+T++ Q I LY+D G++ +DRCPHR KLS GQ+I LE
Sbjct: 26 WYVVARSYEVTN-KPTGVTLWQQAIALYRDSTGKVHALEDRCPHRQVKLSHGQVISDELE 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 246
C YHGW+F G+C +P L A+ K+P S +R + VKE G +W++ K P P L
Sbjct: 85 CAYHGWRFNSTGECAAVPYLAANQKLP-SCKIRRHSVKEQDGFIWLFPGDKEPSTEPMGL 143
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P +E+ V H +S L+ENLMD H H D A E + E
Sbjct: 144 PEWEHLNYIASVAVIDCHA---HYSYLIENLMDMYH---GHLHQDLQAWAEASLQDINED 197
Query: 307 TERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGL-------- 358
R D + Q K + + + P + Q + E +D H+++ L
Sbjct: 198 ANRVDAHYTAQ-SYYKIDRIWSISQLFFPALRQLHSEPLDVSYIYPHWASKLGNDFKIYC 256
Query: 359 FLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY-------FHQSASKVFE----QDMGFL 407
LC ++ F + + P W+ +A K+ + QD+ +
Sbjct: 257 LLCPVNETQTKAYLIHFTSLNAFWRLHKLPVWFRRFVKDSLFNAAKKLLDGLVIQDVQMI 316
Query: 408 SSQNEVLLK 416
+ +V L+
Sbjct: 317 EEEQQVYLQ 325
>gi|323448461|gb|EGB04359.1| hypothetical protein AURANDRAFT_32727 [Aureococcus anophagefferens]
Length = 493
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 186/457 (40%), Gaps = 98/457 (21%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK--------GELRCHQDRCPHRL 173
+DW + WYP+ + + P + + +VL+ DG G R +D CPHR
Sbjct: 29 FDWFDHWYPVNVVDSMDPSRPHKVQLLGLNLVLWNDGATVGGEKAAGSWRAFEDSCPHRR 88
Query: 174 AKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC---VRTYEVKESQG 229
LSEG++ DG L C YHGW+++G G C +P P ++K R C ++ + + G
Sbjct: 89 GPLSEGRVEDDGTLLCSYHGWRYDGSGACSDLPYSP-ESKRERHQCSASCASFPTQVADG 147
Query: 230 VVWVWMSQKTPP-----NPDKLPWFENFARPG------FQDVSTIHELPYDHSILLENLM 278
+VWV+ ++ P L + RPG + + + + P ++EN +
Sbjct: 148 MVWVFPNRAISAIEALLKPAPLVSELHDPRPGEDRDWQVKIPAGVRDFPCGWDTMVENTL 207
Query: 279 DPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF---LRFEAP 335
DPAH +H T + D + F+ T++ R G E DG M + L F P
Sbjct: 208 DPAHFCAAHHGT-LGDRYSDPRAYTFKTTKKVSR----DGGFELDGDMGSLESALEFVPP 262
Query: 336 CVLQNNRESVDNKTGEKHYSTGLFL---CRPTGQGK-----SMLIVR---FGTT------ 378
C+++ G + L L C PT GK ++L R FG T
Sbjct: 263 CLVKYR-----PNYGAMPFEGALVLATYCVPTAPGKVRPLATVLRDRAAPFGETLAERAL 317
Query: 379 ----GTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKV-PTK-------ELYF 426
G + + L P W+ H ++S V QD L Q L+ E PTK ++ +
Sbjct: 318 AVFMGPTWFPGLVPKWFGHIASSVVLHQDAALLYEQYRNLIDEGYEPTKPGSKSFNQVCY 377
Query: 427 NLRSIDTWVAEYRKWMD-KAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAK 485
+D V YR+W+ AG G+P+ +LP +
Sbjct: 378 MPNDVDRGVTAYRRWLQVHAGGGVPW-------------------------ACDDALPPR 412
Query: 486 GGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKN 522
G + ++ + + H HC C A + F ++
Sbjct: 413 G------SEDIFDMWDAHTSHCSHCLDAYRNFGIARD 443
>gi|376003503|ref|ZP_09781313.1| oxygenase [Arthrospira sp. PCC 8005]
gi|375328160|emb|CCE17066.1| oxygenase [Arthrospira sp. PCC 8005]
Length = 347
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +++V +P+G+ +++Q IVL++D +G++ +DRCPHR KLS G+ I +E
Sbjct: 21 WYVVSSSQEVTS-SPVGVILWNQPIVLFRDTQGKINALEDRCPHRQVKLSHGKAIGDEIE 79
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-PDKL 246
C YHGW+F G G CV +P L K P+ ++TY V+E G +W+++ ++ P N P ++
Sbjct: 80 CTYHGWRFNGGGDCVYVPYLQESQKPPKCG-IKTYPVRELYGFIWIFIGEEKPDNEPLEI 138
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P +E+ V+TIH + +S L+ENLMD H H ++ A E E
Sbjct: 139 PEWEHLNY--IATVATIHTQAH-YSFLVENLMDMYH---GHLHQNWQAWTEAQLDYITET 192
Query: 307 TERTDRGFAGQ 317
+ D + Q
Sbjct: 193 DNKVDAYYEAQ 203
>gi|238767620|dbj|BAH66649.1| chlorophyllide a oxygenase [Mesostigma viride]
Length = 299
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 37/298 (12%)
Query: 157 DGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS 216
D G + C +D C HR LS G + +G C YHGWQ++ +GKC K+PQ A++
Sbjct: 1 DEDGRVACLRDECAHRACPLSLGTVENGHATCPYHGWQYDTDGKCTKMPQTRLRAQVR-- 58
Query: 217 ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWF---ENFARPGFQDVSTIHELPYDHSIL 273
V T V+E G++WV+ P P+ LP F NF + E+P +H ++
Sbjct: 59 --VSTLPVREHDGMIWVYPGSNEP--PEHLPSFLPPSNFT----VHAELVLEVPIEHGLM 110
Query: 274 LENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFE 333
+ENL+D AH P +H T ++ + F+V ++ AG W P ++FE
Sbjct: 111 IENLLDLAHAPFTHTET-FAKGWSVPDSVNFKVAAQS---LAGHW-----EPYPISMKFE 161
Query: 334 APC-------VLQNNRESVDNKTGE-KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIK 385
PC + + + +GE K + L +C P G+G++ ++ R + W+K
Sbjct: 162 PPCMTISEIGLAKPGQLEAGKFSGECKQHLHQLHVCMPAGEGRTRILYRM-CLDFAHWVK 220
Query: 386 LFPDW--YFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKW 441
P + A++V +D+ + Q + +L+ ++++N + D YR W
Sbjct: 221 YIPGIQNVWSGMATQVLGEDLRLVEGQQDRMLR----GADIWYNPVAYDKLGVRYRSW 274
>gi|307110738|gb|EFN58973.1| hypothetical protein CHLNCDRAFT_137587 [Chlorella variabilis]
Length = 432
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 157/372 (42%), Gaps = 42/372 (11%)
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL-YKDGKGELRCHQDRCPHRLAKLSEG 179
++W ++WYPL + P TV +++V+ Y + R +DR PHRLA LSEG
Sbjct: 19 QFNWQQQWYPLAPVSYLDRAKPTPYTVLGRRLVVWYHAPSQQWRALEDRWPHRLAPLSEG 78
Query: 180 QL--IDGRLECLYHGWQFEGEGKCVKIPQL-----PADAKIPRSACVRTYEVKESQGVVW 232
++ G L+C YHGWQF G+G+C IPQ A A + +CV + V++ QG++W
Sbjct: 79 RIEPASGNLQCSYHGWQFGGDGRCASIPQADSPQQEATACGSQRSCVAAFPVRQEQGMLW 138
Query: 233 VWM---------SQKTP-PNP-DKLPWFENFARPGFQDVSTIH--ELPYDHSILLENLMD 279
VWM SQ P P P + L + A P + + ELP LLENL+D
Sbjct: 139 VWMEAGPGAAAASQLRPLPLPAELLSSGGDGATPAGSLLGGWYQRELPLSAEYLLENLLD 198
Query: 280 PAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGRE------KDGSMPNFLRFE 333
P+HI +H S R + PL + GF R+ + G E
Sbjct: 199 PSHIHFAHSGVIGSPSRAGSIPLHLAGPLTSQGGFQLHMDRQWQGRAGRQGGRGQQQARE 258
Query: 334 APCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIK-------L 386
P ++ + +G T G S + + TG P ++ L
Sbjct: 259 IPGLVDLGEAAPAGGSGSVPAVTRFVPPGLVCPGTSRVFTAYSATGLPPVLQSALRSDAL 318
Query: 387 FPDWYFHQ-----SASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKW 441
P + Q A +V + D + Q + +E + YF + D V +W
Sbjct: 319 APLLHAFQFLADLGAHQVIDGDAVHIHQQERTVRQEG---RRSYFMPAAADRGVMLLHRW 375
Query: 442 MDKAGHGMPYYF 453
+D+ G P YF
Sbjct: 376 LDEYAGGGPQYF 387
>gi|307103693|gb|EFN51951.1| hypothetical protein CHLNCDRAFT_54799 [Chlorella variabilis]
Length = 683
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 149/330 (45%), Gaps = 39/330 (11%)
Query: 128 WYPL-YLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
W+ + +++K P+D + +F Q VL++D +G C D C HR LS GQ++DG L
Sbjct: 331 WFAVAFVSKLGPEDK-VPFELFGQAWVLFRDSEGRPACVLDECAHRGCPLSLGQVVDGNL 389
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+F G+G+C K+P + R V E G VWVW + P P L
Sbjct: 390 VCPYHGWRFNGKGECTKMP----STNLCRGVAVSALPCAEQDGFVWVWPGWEEPTLP--L 443
Query: 247 PWFENFARP--GFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
P RP G++ + I E+P +H +L+ENL+D AH P +H T P+
Sbjct: 444 P---AVTRPPAGYRIHAEIEVEVPVEHGLLVENLLDLAHAPFTHTSTFAR-----GWPVP 495
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV-LQNNRESVDNKTGE-------KHYS 355
V R G W P + F PC+ L + + K G +++
Sbjct: 496 DAVKFHASRLLGGNW-----DPYPIEMSFNPPCMTLSHVGLARPGKAGVGATPQDCQNHL 550
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEV 413
L +C P+ G + L+ R T W +L P ++ A +V +D+ + Q +
Sbjct: 551 HQLHVCLPSRAGHTRLLYRMATDFLW-WTELLPGIQHFWRYIAGQVLGEDLVLVLGQQDR 609
Query: 414 LLKEKVPTKELYFNLRSIDTWVAEYRKWMD 443
LL+ + + + S D YR+W +
Sbjct: 610 LLR----GGDTWRHPVSYDKLAVRYRRWRN 635
>gi|5478803|dbj|BAA82482.1| chlorophyll b synthase [Prochlorothrix hollandica]
Length = 276
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 126/277 (45%), Gaps = 24/277 (8%)
Query: 142 PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 201
PLG +FDQ VL++D +G C D C HR LS G++I GR++C YHGW+++ +G+C
Sbjct: 8 PLGFELFDQCWVLFRDDQGTAACILDECAHRACPLSLGKVIQGRIQCPYHGWEYDRQGEC 67
Query: 202 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-PDKLPWF-ENFARPGFQD 259
V +P A S + T V E G++WVW P P P +NF
Sbjct: 68 VHMPSCQA-----ISNPILTLPVMEQGGMIWVWPGTDEPGALPSLAPTLPDNFTL----Q 118
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWG 319
+ +L +H ++LENL+D AH P +H T AK P + G W
Sbjct: 119 AELVMDLEVEHGLMLENLLDLAHAPFTH--TGTFAKGWPVPPF-VRFANAATTPWTGHW- 174
Query: 320 REKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTG 379
P + FE PC + + G + + C P GQG++ L+ R
Sbjct: 175 ----DPYPIHMTFEPPCFVISTIGLRGKDCGRHLHQ--VHACLPRGQGRTRLLYRLALD- 227
Query: 380 TSPWIKLFPDWY--FHQSASKVFEQDMGFLSSQNEVL 414
W++ P + + A++V ++D+ + Q E L
Sbjct: 228 FGHWLRWVPGTHCLWQHLANRVIQEDLRLVQGQQERL 264
>gi|409993443|ref|ZP_11276584.1| Rieske (2Fe-2S) protein [Arthrospira platensis str. Paraca]
gi|291571667|dbj|BAI93939.1| probable dioxygenase, Rieske iron-sulfur component [Arthrospira
platensis NIES-39]
gi|409935712|gb|EKN77235.1| Rieske (2Fe-2S) protein [Arthrospira platensis str. Paraca]
Length = 347
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +++V +P+G+ +++Q IVL++D +G++ +DRCPHR KLS G+ I +E
Sbjct: 21 WYVVSSSQEVTS-SPVGVILWNQSIVLFRDTQGKINALEDRCPHRQVKLSHGKAIGDEIE 79
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 246
C+YHGW+F G G C +P L + K P+ ++TY V+E G +WV++ ++ P P ++
Sbjct: 80 CIYHGWRFNGGGDCAYVPYLQENQKPPKCG-IKTYPVRELYGFIWVFIGEEKPDIEPLEI 138
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P +E+ V+TIH + +S L+ENLMD H H ++ A E E
Sbjct: 139 PEWEHLNY--IATVATIHTQAH-YSFLIENLMDMYH---GHLHQNWQAWTEAQLDYITET 192
Query: 307 TERTDRGFAGQ 317
+ D + Q
Sbjct: 193 DNKVDAYYEAQ 203
>gi|294497580|ref|YP_003561280.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium QM
B1551]
gi|294347517|gb|ADE67846.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium QM B1551]
Length = 335
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 150/342 (43%), Gaps = 38/342 (11%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSE 178
+ D +EW P + D+ D PL +T+ ++++VL++ ++ +D C HR A LS
Sbjct: 2 IKDLVLAKEWLPAAYSHDLTDQ-PLQVTILEERVVLFRTTNA-IKAFKDLCIHRGAALSL 59
Query: 179 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK 238
G+++D + C YHGW+++ G CVKIPQ P IP A + Y E G++WV M+ +
Sbjct: 60 GKVVDDCIVCPYHGWKYDDAGACVKIPQQPPGRAIPSKAKAQVYACVEKYGIIWVKMNSE 119
Query: 239 TPPNPDKLPWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRT------- 290
P LP+++ GF+ V + H L ++EN +D +H+ H+ +
Sbjct: 120 AGDTP--LPFYDEHLNSGFKTVCANPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSDYA 177
Query: 291 ---DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDN 347
DY +D + + E+ D G + + FE + V+
Sbjct: 178 EIPDYKVHWKDNRYVSDEIAVYADADGTGNFAT-------IYYTFEILRPTVARLKKVNY 230
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFL 407
+TGE + LF P + KS + + PD YF + EQD +
Sbjct: 231 ETGEIF--SMLFAVLPEEERKSTVFALVSRNYSFDA----PDQYFRDFQQLIIEQDTSIV 284
Query: 408 SSQNEVLLKEKVPTK---ELYFNLRSIDTWVAEYRKWMDKAG 446
SQ E++P EL+ N D YR+W+ G
Sbjct: 285 ESQK----PEELPLDLQAELHLN---PDRLSIAYRRWLGDLG 319
>gi|159479812|ref|XP_001697980.1| rieske iron-sulfur cluster 55 kDa protein of chloroplast inner
membrane translocon [Chlamydomonas reinhardtii]
gi|158273779|gb|EDO99565.1| rieske iron-sulfur cluster 55 kDa protein of chloroplast inner
membrane translocon [Chlamydomonas reinhardtii]
Length = 563
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 160/413 (38%), Gaps = 76/413 (18%)
Query: 91 SSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQ 150
+++ VP D + P++E E + W + W+P+ + + + P T+ +
Sbjct: 60 TATVVPPARDVQPSATPSAESE--------QFVWAQNWFPVAVVECLDSSRPHPFTLMGK 111
Query: 151 QIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPA 209
+VL++DG G R +D CPHRL LSEG++ DG L C YH W+F+G GKC IPQ+
Sbjct: 112 DLVLWRDGGGTWRAFEDACPHRLVPLSEGRIEKDGTLLCAYHAWRFDGGGKCTSIPQVEG 171
Query: 210 DAKI---------PRSACVRTYEVKESQGVVWVWMSQKTP-------PNP---------- 243
PR CV +G M P P P
Sbjct: 172 KEAAERAFSSPSKPRRVCVCVCAYVCVKGREAYKMRPALPLRACSFLPAPLPLTVFELPS 231
Query: 244 ---DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
LPWF F+D LPY + +EN+ DPAH+ +SH A A
Sbjct: 232 SRVQPLPWF-------FRD------LPYSYDFFVENVTDPAHVNVSHHNV---AGNRYAP 275
Query: 301 PLGFEVTERTDRGFAGQWGREKDGSMPNF----LRFEAPCVLQNNRESVDNKTGEKHYST 356
F V + AG + + N F P +++ E D
Sbjct: 276 DQYFSVDPLREVSAAGGFKYASRAPVTNVSTSSTEFLPPSLVKIKVEYSDGAA----LIL 331
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKL----------FPDWYFHQSASKVFEQDMGF 406
L+ C PT G + + R T P K+ P W H +AS QD F
Sbjct: 332 ALYSC-PTTPGHNRHVGRQILIKT-PEGKMPRGLAFFALPMPKWLGHATASVFLHQDQVF 389
Query: 407 LSSQNEVLLKEKVPTKEL-YFNLRSIDTWVAEYRKWMDK-AGHGMPYYFGHST 457
L Q ++ + YF D +R W+ + AG G+PY G +T
Sbjct: 390 LHQQERIVAGRSAASHTAKYFMPAPSDNMTVAFRTWLGQHAGGGVPYAGGRTT 442
>gi|115483520|ref|NP_001065430.1| Os10g0567100 [Oryza sativa Japonica Group]
gi|78709025|gb|ABB48000.1| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113639962|dbj|BAF27267.1| Os10g0567100 [Oryza sativa Japonica Group]
gi|215693283|dbj|BAG88665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185041|gb|EEC67468.1| hypothetical protein OsI_34699 [Oryza sativa Indica Group]
gi|222613295|gb|EEE51427.1| hypothetical protein OsJ_32507 [Oryza sativa Japonica Group]
Length = 542
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 35/332 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C Q+ C HR L G + +GR++
Sbjct: 221 WYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVSEGRIQ 280
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HGW++ +GKC K+P A + +R+ E +G+VW+W TP + +P
Sbjct: 281 CPFHGWEYSTDGKCEKMP-----ATKLLNVRIRSLPCFEQEGMVWIWPGDGTPES--TIP 333
Query: 248 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ GF + ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 334 SLQ--PPSGFTIHAEMVMELPVEHGLLLDNLLDIAHAPFAH--TSTFAKGWSVPSLVKFL 389
Query: 307 TERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNR--------ESVDNKTGEKHYSTGL 358
T + G G W P + F PC++ + E K H L
Sbjct: 390 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTTGISKPGKLEGKSIKQCSTHLHQ-L 441
Query: 359 FLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEVLLK 416
+C P+ + K+ ++ + + +PW+K P + S KV +D+ + Q E ++
Sbjct: 442 HICLPSSRNKTRMLYQM-SLNFAPWLKHIPFMHILWSHFGEKVLNEDLRLVLGQQERMIN 500
Query: 417 EKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
++ S D YR W D G
Sbjct: 501 ----GANVWNWPVSYDKLGIRYRLWRDAIERG 528
>gi|18854993|gb|AAL79685.1|AC087599_4 putative chlorophyll synthase [Oryza sativa Japonica Group]
Length = 519
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 35/332 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C Q+ C HR L G + +GR++
Sbjct: 198 WYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVSEGRIQ 257
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HGW++ +GKC K+P A + +R+ E +G+VW+W TP + +P
Sbjct: 258 CPFHGWEYSTDGKCEKMP-----ATKLLNVRIRSLPCFEQEGMVWIWPGDGTPES--TIP 310
Query: 248 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ GF + ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 311 SLQ--PPSGFTIHAEMVMELPVEHGLLLDNLLDIAHAPFAH--TSTFAKGWSVPSLVKFL 366
Query: 307 TERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNR--------ESVDNKTGEKHYSTGL 358
T + G G W P + F PC++ + E K H L
Sbjct: 367 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTTGISKPGKLEGKSIKQCSTHLHQ-L 418
Query: 359 FLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEVLLK 416
+C P+ + K+ ++ + + +PW+K P + S KV +D+ + Q E ++
Sbjct: 419 HICLPSSRNKTRMLYQM-SLNFAPWLKHIPFMHILWSHFGEKVLNEDLRLVLGQQERMIN 477
Query: 417 EKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
++ S D YR W D G
Sbjct: 478 ----GANVWNWPVSYDKLGIRYRLWRDAIERG 505
>gi|168050551|ref|XP_001777722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670942|gb|EDQ57502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 562
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 148/328 (45%), Gaps = 41/328 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP + D+ D + F++ V+++ G C +D C HR LS G++ DGR++
Sbjct: 246 WYPAAFSADIDDKTMVPFDSFEEAWVIFRGKDGRPGCVRDSCAHRACPLSLGKVEDGRIQ 305
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ GKC K+P +A++ C+ E G+VW+W +TP L
Sbjct: 306 CPYHGWEYNTSGKCEKMPSTRLVNAELDSLPCI------EQDGMVWIWPGNETPST--NL 357
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P + T+ ELP +H +L+ENL+D AH P +H T ++ E + F
Sbjct: 358 PCLNPPSHYTIHAQITM-ELPVEHGLLVENLLDLAHAPFTHT-TTFAKGWEVPSFVKFRT 415
Query: 307 TERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN----------NRESVDNKTGEKHYST 356
+G W P + F+ PC++ + N VD H
Sbjct: 416 ---PIAALSGTW-----DPYPIAMEFKPPCMVLSTIGLEKPGKLNGTDVDACPTHLHQ-- 465
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVL 414
L +C P+ +GK+ L+ R +P++K P + + A+KV +D+ + Q
Sbjct: 466 -LHVCMPSSKGKTRLLYRMALD-FAPYLKHVPFIKYLWQHLANKVLGEDLRLVEGQ---- 519
Query: 415 LKEKVPTKELYFNL-RSIDTWVAEYRKW 441
++++ +NL + D YR+W
Sbjct: 520 -QDRMERGANVWNLPVAYDKLGVRYRRW 546
>gi|411117878|ref|ZP_11390259.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoriales cyanobacterium JSC-12]
gi|410711602|gb|EKQ69108.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoriales cyanobacterium JSC-12]
Length = 355
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 13/195 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +V D PLG+ ++ Q IVLY+D + ++ +DRCPHR KLS G ++DG LE
Sbjct: 22 WYVVARASEVTD-KPLGVVLWHQDIVLYRDRQNQIHALEDRCPHRFVKLSRGAVVDGELE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-----MSQKTPPN 242
C YHGW+ EG+C +P L + K+P S+ +R+Y V+E G +W++ + Q
Sbjct: 81 CAYHGWRIGTEGQCTCVPYLAENQKLP-SSKIRSYPVQELNGFIWLYPGDRTLLQAQNIQ 139
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
P LP +++ G +S I + S L+ENLMD H + + +++ DA
Sbjct: 140 PMGLPEWDHLNYIG--SISVI-DAKAHFSYLIENLMDMYHGHLHQNLQAWASAELDAIE- 195
Query: 303 GFEVTERTDRGFAGQ 317
E R D + Q
Sbjct: 196 --ETDHRVDAHYTAQ 208
>gi|186682326|ref|YP_001865522.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186464778|gb|ACC80579.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 461
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 181/428 (42%), Gaps = 75/428 (17%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSE 178
+ + WT++WYP+ + P +T+ +++V+++D + D CPH+LA+LS
Sbjct: 2 ITSFSWTKQWYPITPVSYLEPSYPTPMTLLGKKLVIWRDKHQKWVAMDDSCPHKLAQLSL 61
Query: 179 GQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVV 231
G + +G L C +HGW F+G GKC IP L +D K ++AC V TY + QG++
Sbjct: 62 GSINENGNLMCRHHGWCFDGAGKCTNIPML-SDEKALKAACNSERSQVTTYPTQVLQGLL 120
Query: 232 WVW-------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 284
W+W T P +P E+ D + E+P +++ +E+ DP+H
Sbjct: 121 WIWADNSPTAFKDSTSKQPALMP--ESQLDSSLTDW-FMSEVPVGYTVSVESSFDPSHAQ 177
Query: 285 ISHDR-TDYSAKREDAQPL-GFEVTER--TDRGF----AGQWGREKDGSMPNFLRFEAPC 336
H +S +R A P+ FEV + GF +G KD M +F PC
Sbjct: 178 FLHKGIAGFSPER--AIPIQNFEVFGEISAEDGFTLEHSGYNIFNKD--MDATRKFTPPC 233
Query: 337 VLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGT----SPWIKLFPDWYF 392
+N S G+ F+ PT G I +F + W +L P +
Sbjct: 234 ---SNTTSYKYSNGKSALFQLYFV--PTKSGYCKQIGKFIADSLPQKGNFWFELLPKYLQ 288
Query: 393 ----HQSASKVFEQDMGFLSSQ--NEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAG 446
H S+ K+ QD+ + SQ NE ++ + ++ YF D + +RKW+D+
Sbjct: 289 TGLKHSSSYKLSNQDLSMMHSQAVNESVVNKT--WQKSYFMPSVADIGIVTFRKWLDEFA 346
Query: 447 HGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIH 506
G P G V AP + L + + RH H
Sbjct: 347 GGKPALQG------------VAEAP----------------FQELSDEQLYDIWHRHTKH 378
Query: 507 CKGCRSAV 514
C CR ++
Sbjct: 379 CPSCRQSL 386
>gi|262197943|ref|YP_003269152.1| Rieske (2Fe-2S) domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262081290|gb|ACY17259.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haliangium ochraceum
DSM 14365]
Length = 367
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 135/304 (44%), Gaps = 29/304 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L +++ PL T+ ++++VL++D G DRC HR A LSEG L DG +
Sbjct: 29 WYVACLAEELGRKKPLARTIMEERLVLWRDADGRAVAMLDRCLHRNAPLSEGDLFDGCIG 88
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP--NPDK 245
C YHGW ++ +G CV +P + P + + T+ V+E G+VWVWM P P
Sbjct: 89 CPYHGWTYDRDGACVNVPSAGPEGA-PVALRIETFPVRERDGLVWVWMGGDVAPEREPFA 147
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+P+++ PG++ + D + L+EN MD H H R + ++ A + E
Sbjct: 148 MPFYDT---PGWRRYYMVTAFDNDVTSLVENFMDVPHTVFVH-RGWFRSRSRRAVDMRVE 203
Query: 306 VT--------ERTDR--GFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
T E+ D GF K M + RF P N VD GE
Sbjct: 204 RTADSVLVSYEQPDDQIGFTRLLLNPKGLPMTHTDRFYMP-----NITRVDYLWGEA--E 256
Query: 356 TGLFL---CRPTGQGKSML--IVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
TG + C P G+SM+ ++ + ++P + + V EQD+ +
Sbjct: 257 TGFVITSQCTPVDAGRSMVYTLISYKLPISAPLLTPVLQPLLRRYTRAVIEQDVDIMRVH 316
Query: 411 NEVL 414
VL
Sbjct: 317 GSVL 320
>gi|338534630|ref|YP_004667964.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
gi|337260726|gb|AEI66886.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
Length = 332
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
W WY + + + + PLGL +++VL++D GE C CPHR A L G++
Sbjct: 13 QWAAHWYAVARSPALGRERPLGLQRLGRRLVLWRDAAGEAHCADAACPHRGADLGLGRVR 72
Query: 183 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 242
+G LEC YHG+++EG G C+ +P DAK R+ +R + V+E+ G +W W+ +
Sbjct: 73 EGALECPYHGFRYEGGGACLAMPCEGRDAKPSRALALRVHPVREAHGFIWAWLGGQARAP 132
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
LPW P S + ++E +MD H P +H R
Sbjct: 133 LPPLPWLAGAPEPAANSASVEEVWGARFTRVMEGMMDLHHFPFAHRR 179
>gi|428777231|ref|YP_007169018.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428691510|gb|AFZ44804.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 340
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 100/175 (57%), Gaps = 7/175 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V D P +T++ Q IVLY+ G++ +DRCPHR +LSEG+L R+E
Sbjct: 15 WYVVARSSEVTTD-PYAVTLWKQPIVLYRQSDGQVCALEDRCPHRFVRLSEGKLQRDRVE 73
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 246
C YHGWQF EGKCV IP L K+P +R Y V+E G +WV++ +T P ++
Sbjct: 74 CAYHGWQFNAEGKCVSIPYLTEKQKLP-PCQLRVYPVQEGDGFIWVFLGDETATVPRFQV 132
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS-AKREDAQ 300
P +++ + ++ E +S L+ENLMD H + D ++ AK E+ +
Sbjct: 133 PEWDHL---NYIATVSVIETQAHYSYLIENLMDMYHGHLHEDWQAWTDAKLENIE 184
>gi|298710363|emb|CBJ31980.1| Rieske (2Fe-2S) region [Ectocarpus siliculosus]
Length = 495
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 173/441 (39%), Gaps = 84/441 (19%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGR 185
+WYP+ KD + + + +V++++ +G DRCPHR A LSEG++ DG
Sbjct: 3 KWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDGS 62
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKI---PRSACVRTYEVKESQGVVWVW-------M 235
L C YH W+F+ +GKC+ IPQ D K PR AC + Y + +Q +VWVW +
Sbjct: 63 LLCAYHAWRFDADGKCLSIPQSDRDGKDETNPR-ACAKLYPTQVAQDMVWVWGENGSDAV 121
Query: 236 SQKTPPNPDKLPWFENFARPGFQD------VSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ P + E+ + G + V T +L Y EN+MDPAH+ +SH
Sbjct: 122 LESLLTKPALVSALED--KEGIKSGRVVPGVVTQRDLAYSWETFWENVMDPAHVVVSHH- 178
Query: 290 TDYSAKREDAQPLGFEVTER---TDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVD 346
KR A+PL E T + T GF + G+ F P +++ E D
Sbjct: 179 -GLMGKRSMAKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELED 237
Query: 347 NKT------------GEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPW----------- 383
KT G P G++ +P
Sbjct: 238 GKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGENKGDDEKDKKKGAPSLLQLVARISPV 297
Query: 384 -IKLFPD----WYFHQSASKVFEQDMGFLSSQNEVLLKE---KVPTKELYFNLRSIDTWV 435
+KL P+ W H + QDM L Q +++ + + + D +
Sbjct: 298 KLKLAPNEQRAWIQHIFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKGI 357
Query: 436 AEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPN 495
RKW+ K G G P + PK G SLP++ P+
Sbjct: 358 HTLRKWIKKFGSGGPPW--------PK--------------GYDTSLPSR-----HDNPD 390
Query: 496 LA-NRYFRHVIHCKGCRSAVK 515
+ + Y +H HC C A+K
Sbjct: 391 VMWDIYEQHTKHCTTCLGALK 411
>gi|428201421|ref|YP_007080010.1| ring-hydroxylating dioxygenase, large terminal subunit [Pleurocapsa
sp. PCC 7327]
gi|427978853|gb|AFY76453.1| ring-hydroxylating dioxygenase, large terminal subunit [Pleurocapsa
sp. PCC 7327]
Length = 356
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 21/176 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V D+ P+G+T++ Q IVLY+D G++ +DRCPHR KLS G++I LE
Sbjct: 23 WYVVARSTEVRDE-PIGVTLWHQAIVLYRDKTGKVHALEDRCPHRQVKLSHGKVIGNELE 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F EG CV +P L ++ K+P +R Y V+E G +W++ P + DKL
Sbjct: 82 CAYHGWRFNWEGNCVAVPYLASNQKLPNCK-IRRYPVRELDGFIWLF-----PGDLDKLD 135
Query: 248 WFENFARP---------GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
N +P + +I E +S L+ENLMD H H DY A
Sbjct: 136 --RNSIQPMGVPEWNHLNYIATVSIIECKGHYSFLIENLMDMYH---GHLHDDYQA 186
>gi|168057848|ref|XP_001780924.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667637|gb|EDQ54262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 35/298 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ D + F++ V+++ G C +D C HR LS G++ +GR++
Sbjct: 191 WYPVAFSADIDDKTMVPFNSFEEAWVIFRGKDGRPGCVRDSCAHRACPLSLGKVEEGRIQ 250
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ GKC K+P +AK+ C+ E G+VW+W +TP L
Sbjct: 251 CPYHGWEYNTSGKCEKMPSTRFVNAKLDSLPCI------EQDGMVWIWPGNETPST--NL 302
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P + T+ ELP +H +L+ENL+D AH P +H T AK D F
Sbjct: 303 PCLNPPSHYTIHAQITM-ELPVEHGLLVENLLDLAHAPFTHTTT--FAKGWDVP--NFVK 357
Query: 307 TERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN----------NRESVDNKTGEKHYST 356
G W P + F+ PC++ + N V+ H
Sbjct: 358 FRTPIAALQGTW-----DPYPIAMEFKPPCMVLSTIGLEKPGKLNGSDVEACPTHLHQ-- 410
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNE 412
L +C P+ +GK+ L+ R +P++K P + + A+KV +D+ + Q +
Sbjct: 411 -LHVCMPSSKGKTRLLYRMA-LDFAPYLKHVPFIKYLWQHLANKVLGEDLRLVEGQQD 466
>gi|427724958|ref|YP_007072235.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Leptolyngbya
sp. PCC 7376]
gi|427356678|gb|AFY39401.1| Rieske (2Fe-2S) iron-sulfur domain protein [Leptolyngbya sp. PCC
7376]
Length = 363
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+++V D P GLT++ ++ VL++D +G + +DRCPHR KLS GQ++ RLE
Sbjct: 29 WYVAALSREVIDQ-PFGLTLWKEKFVLFRDRQGSVHALEDRCPHRQVKLSSGQVVGDRLE 87
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF+ EG C +P L + + P +R+ V+E G +WV+ K+
Sbjct: 88 CAYHGWQFDAEGTCAHVPYLAENQRRPNCK-IRSLPVREQDGFIWVFPGDLETLEEQKIE 146
Query: 248 WFE--NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
F +A + ++ + S L+ENLMD H H DY A A+ G E
Sbjct: 147 PFSLPEWAHLNYIVTVSVIDCEGHFSYLIENLMDMYH---GHLHNDYQA-WASAKLEGLE 202
Query: 306 VTE-RTDRGFAGQ 317
+E R D + Q
Sbjct: 203 SSEMRVDAHYEAQ 215
>gi|326315963|ref|YP_004233635.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323372799|gb|ADX45068.1| Rieske (2Fe-2S) iron-sulfur domain protein [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 325
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 97/167 (58%), Gaps = 17/167 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ L +DV +PL + DQ++VL++D G DRCPHR A+LS G++ DGRLE
Sbjct: 7 WHPVALAEDV-GSSPLAALLLDQRLVLWRDAAGAPHAFPDRCPHRGARLSLGRVHDGRLE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQFEG G+CV +P LP + P V + V+E+ G+VWV ++ P LP
Sbjct: 66 CPYHGWQFEGGGRCVHVPALP-QFQPPAGHRVECFGVREAHGLVWVCLA----PGDAALP 120
Query: 248 WF--ENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 288
F E+ AR + ++ PYD + ++EN +D +H H+
Sbjct: 121 AFTAEDDAR-----LRKLNCGPYDVAASAPRIVENFLDMSHFGFVHE 162
>gi|427729934|ref|YP_007076171.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427365853|gb|AFY48574.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 348
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V + PLG+ ++ Q I LY+D +G++ +DRCPHR KLS GQ+I+ LE
Sbjct: 23 WYVVARSSEVTN-RPLGIIIWHQAIALYRDSQGQIHALEDRCPHRQVKLSHGQVINDELE 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 246
C YHGW+F +G+C +P L + K+P + +R Y VKE G +W++ P P L
Sbjct: 82 CAYHGWRFNHQGECATVPYLATNQKLP-NCTIRLYPVKEQDGFIWLFPGDGEPSVEPLGL 140
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS-AKREDAQPLGFE 305
P +E+ + + +S L+ENLMD H + D ++ A ED E
Sbjct: 141 PEWEHL---NYIATVAVINCQAHYSYLIENLMDMYHGHLHQDLQAWAEATLEDID----E 193
Query: 306 VTERTDRGFAGQ 317
R D + Q
Sbjct: 194 DNHRVDAHYQAQ 205
>gi|108758573|ref|YP_631639.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108462453|gb|ABF87638.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 330
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
W WY + + + PLG+ +++VL++D GE C CPHR A L G++
Sbjct: 12 QWAAHWYAVARSPALGTGRPLGIQRLGRRLVLWRDAAGEAHCADAACPHRGADLGLGRVR 71
Query: 183 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 242
G LEC YHG+++ G G C+ +P DAK R +R + V+E+ G +W W+ + P +
Sbjct: 72 QGALECPYHGFRYGGGGACLAMPCEGPDAKPSRGLALRMHPVREAHGFIWAWLGGRAPAS 131
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
LPW + P + + ++E +MD H P +H R
Sbjct: 132 LPALPWLADAPEPDSSSAAVEEVWNARFTRVMEGMMDLHHFPFAHRR 178
>gi|149921339|ref|ZP_01909793.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
gi|149817772|gb|EDM77236.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
Length = 354
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG-QLIDG 184
+ WY + + ++ APL T+ ++++ + G+L + CPHR A+LS G QL DG
Sbjct: 4 DSWYAVAWSHEI-KRAPLARTILGRELLFRRSPTGQLHVTTNVCPHRQARLSAGKQLADG 62
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
R++C YH W+F+ +G+CV +P LP DA++P AC+ +Y E Q +VWVWM + +
Sbjct: 63 RIQCPYHAWEFDLDGRCVNVPTLPEDARVPPQACLTSYPAVEEQSLVWVWMGRPGGESTH 122
Query: 245 KLPWFENFARPGFQDVSTIHELP-----YDHSILLENLMDPAHIPISHDRT 290
+P F+ + G Q LP ++ L+EN +DP+HI H T
Sbjct: 123 PVPGFD-YDSLGAQ--VRHQRLPSTRWQANYIDLIENALDPSHIQTVHPNT 170
>gi|220908310|ref|YP_002483621.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864921|gb|ACL45260.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 338
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 9/185 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D P T+ D+ +VL+ D +G+ QDRC HR AKLS GQ+I+G +
Sbjct: 14 WYPVLPIAQL-QDGPKAFTLLDEPLVLWLDQEGKPAATQDRCCHRSAKLSIGQVIEGCIR 72
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+ +G CV++PQ P D IP + Y +E G VWV + PP D +P
Sbjct: 73 CPYHGWEFDPQGACVRVPQHP-DRPIPSGYRINAYPCQERYGYVWVCLE---PPVQD-IP 127
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
F P ++ + E S+ L+EN +D AHIP H++T + +R P +++
Sbjct: 128 EFAEATDPNYRLIPGFWETWQCSSLRLMENTLDIAHIPFVHNQT-FGDERSPVPP-DYDL 185
Query: 307 TERTD 311
E TD
Sbjct: 186 IEETD 190
>gi|257059007|ref|YP_003136895.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589173|gb|ACV00060.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 362
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 96/176 (54%), Gaps = 15/176 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + ++ D PLG+T++D IVLY+D G++ +DRCPHR KLS+G++I LE
Sbjct: 24 WYVVARSTEIKDH-PLGVTIWDHSIVLYRDTLGKIHALEDRCPHRQVKLSDGKVIGNHLE 82
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP-PNPDKL 246
C YHGWQF +G C IP L K+P+ + +Y V+E G +W+++ + N D L
Sbjct: 83 CAYHGWQFNFQGTCHAIPYLNEKQKLPKCQ-INSYPVEELNGFIWLFLGDRQRFENNDIL 141
Query: 247 PWFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDYSAKRE 297
P A P + ++ I E S L+ENLMD H H +Y A E
Sbjct: 142 P----LAMPEWDHLNYIATVSVIECRGHFSFLIENLMDMYH---GHLHQNYQAWTE 190
>gi|75908048|ref|YP_322344.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75701773|gb|ABA21449.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 347
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +++V + PLG+T++ Q I LY+D +G++ +DRCPHR KLS GQ+I LE
Sbjct: 23 WYVVARSQEVTN-KPLGVTLWHQAIALYRDSEGQIHALEDRCPHRQVKLSHGQVIGNELE 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 246
C YHGW+ G+C +P L + K+P +R Y VKE G +W++ P P L
Sbjct: 82 CAYHGWRLNHHGECAAVPYLAENQKLPNCK-IRHYPVKEQDGFIWLFPGDGEPSIEPMGL 140
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS-AKREDAQPLGFE 305
P +++ + I +S L+ENLMD H + D ++ A+ +D + E
Sbjct: 141 PEWDHL---NYIASVAIINCQAHYSYLIENLMDMYHGHLHQDLQAWAQAELQDIE----E 193
Query: 306 VTERTDRGFAGQ 317
ER D + Q
Sbjct: 194 TDERVDAHYQAQ 205
>gi|440683964|ref|YP_007158759.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
gi|428681083|gb|AFZ59849.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
Length = 363
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 9/191 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V + PLG+ ++ Q I LY+D G++ +DRCPHR +LS GQ+ +LE
Sbjct: 30 WYVVARSSEV-TNKPLGVIIWKQAIALYRDHTGKVHALEDRCPHRQVQLSHGQVKGNQLE 88
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 246
C YHGW+F G+CV +P L A+ K+P + +R Y VKE G +W++ S P P L
Sbjct: 89 CNYHGWRFNSNGECVAVPYLAANQKLP-TCQIRHYPVKEQDGFIWLFPSDIEPSIEPMGL 147
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P +E+ VS I+ + +S L+ENLMD H H D A E A E
Sbjct: 148 PEWEHLNY--IATVSVINTQAH-YSYLIENLMDMYH---GHLHQDLQAWAEAALQNIDED 201
Query: 307 TERTDRGFAGQ 317
R + + Q
Sbjct: 202 DNRVNAHYTAQ 212
>gi|170690598|ref|ZP_02881765.1| Vanillate monooxygenase [Burkholderia graminis C4D1M]
gi|170145033|gb|EDT13194.1| Vanillate monooxygenase [Burkholderia graminis C4D1M]
Length = 352
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 119/295 (40%), Gaps = 49/295 (16%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ +V DAPL T+ D+ +VLY+ G+ DRCPHR A LS G+++DG LE
Sbjct: 8 WYVAALSSEVTADAPLARTLLDEPVVLYRVAGGQAVALADRCPHRFAPLSRGRVVDGALE 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F EG+CV P D ++P A R Y V+E G +W W + LP
Sbjct: 68 CPYHGLRFGAEGRCVFNPH--GDGRVPARAEARHYPVRERYGAIWFWPGDPQRASNTPLP 125
Query: 248 WF------ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT----------- 290
F ENF + ++L D NL+D +H H T
Sbjct: 126 AFDYLDPQENFTSERYLHTHANYQLSAD------NLLDLSHFQYLHPETLGSEQMASGAV 179
Query: 291 -------DYSAKRED---------AQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEA 334
S +RE Q ER DR QW G + +R
Sbjct: 180 RATVAGNTVSVRREMKGEYLRPMLTQSFNLLYGERADRELDVQW--IPPGLLTIVVRICE 237
Query: 335 PCVLQNNRESVD------NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPW 383
+ + RE+V HY L R G+ + L+ R + +P+
Sbjct: 238 SGLPETTREAVSAHWLTPETAASSHYFFAFGLPRAIGEHGAELVSRTAQSLLAPF 292
>gi|298709173|emb|CBJ31116.1| Pheophorbide a oxygenase, putative chloroplast precursor
[Ectocarpus siliculosus]
Length = 532
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 89 DMSSSAVPTPDDHKVLVGPASEEESRG--ERRVADYDWTEEWYPLYLTKDVPDD---APL 143
++ + + T + +V GP E S + A + W +WYP+ + +D+ P
Sbjct: 5 ELRAQDIDTVEQREVDSGPKDESGSAAPDTSKQAGFQWRRQWYPVAVMRDLEARDPRMPY 64
Query: 144 GLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQLID--GRLECLYHGWQFEGEGK 200
+ + + +V++KD K G + DRCPHR A LSEG++ GRL+C+YHGW+FEG+GK
Sbjct: 65 PVQLMGEGLVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEGDGK 124
Query: 201 CVKIPQLP----ADAKIPRSACVRTYEVKESQGVVWVW---------MSQKTPPNPDKLP 247
C IPQ A+ + AC K +G +W+W S+ PP +P
Sbjct: 125 CGSIPQATPGSRETAQNSKRACATAIPTKVVEGKLWLWPDPSPEGVKESETVPPA--TVP 182
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
+F F +L Y L+ENL DPAH+P +H R P+ E+
Sbjct: 183 GL-DFGSGDFGGNWYCRKLAYGFDTLIENLADPAHVPFAHH--GVMGSRAMGTPMAIEMD 239
Query: 308 ERTDRG 313
+ G
Sbjct: 240 KEAGSG 245
>gi|443324150|ref|ZP_21053095.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442796058|gb|ELS05383.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 334
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 9/188 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + K + P G + Q+IVL+ D G+ DRC HR A+LS+G++IDG +
Sbjct: 13 WYPV-MPKSHLLEQPQGFELLGQKIVLWLDNSGQAVAAHDRCCHRSAQLSKGKIIDGNIT 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C+YHGWQF+ G CVK+PQL IP++ + TY +E G VWV + + P N +LP
Sbjct: 72 CIYHGWQFDSCGTCVKVPQLEDGKPIPKTYKIETYACQERYGYVWVCLGE--PLN--ELP 127
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ P F+ + +E + ++EN +D AH H T E P EV
Sbjct: 128 DIAEASDPSFRLIPEFYETWNCAGLRVMENELDLAHPTFVHTTT--FGSEEHPIPDAIEV 185
Query: 307 TERTDRGF 314
TE TD G
Sbjct: 186 TE-TDHGI 192
>gi|299471142|emb|CBN78999.1| cell death suppressor protein [Ectocarpus siliculosus]
Length = 501
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 159/389 (40%), Gaps = 62/389 (15%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGR 185
+WYP+ V + + + +V++++ G C DRCPHR A L+EG++ DG
Sbjct: 10 QWYPVLAADHVDSGRAHPVQLLGKNLVVWRNKGGRWSCFDDRCPHRAAPLTEGRIEDDGS 69
Query: 186 LECLYHGWQFEGEGKCVKIPQLP---ADAKIPRSACVRTYEVKESQGVVWVWM------- 235
L C YH W+F+ +GKC+ IPQ D P+ AC + Y + +Q ++WVW
Sbjct: 70 LLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPK-ACAKVYPTQVAQDMIWVWAENGPDAG 128
Query: 236 --SQKTPPN-PDKLPWFENFARPGFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTD 291
S TPP+ +L E A H +L Y ++EN +DPAH+P +H
Sbjct: 129 LESALTPPHLIPELDDKEGLASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGV- 187
Query: 292 YSAKREDAQPLGFEVTER----TDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDN 347
+ +D +P+ FE+ + GF ++ E + N + F PC++ E+ D
Sbjct: 188 AGDRYKDVRPIDFELDKEWPVTATSGFRFKFDDEITDTH-NKVTFVPPCLVL--VENADY 244
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVRFG-------------------------TTGTSP 382
K G+ PT G S L+ R T+G
Sbjct: 245 SGTLKLMLYGI----PTKPGWSRLVGRQAYVHKYAPKSKEAKALHKENKRLGKKTSGLLV 300
Query: 383 WIKL---FPDWYFHQSASKVFEQDMGFLSSQNEVLLK------EKVPTKELYFNLRSIDT 433
++ FP W H ++ QDM FL Q + L + D
Sbjct: 301 AARITSKFPQWLMHATSGIFLYQDMVFLHHQEKTLASVGYDGTSASSYSNAVYTPAPADR 360
Query: 434 WVAEYRKWMDKAGHGMPYYFGHSTISLPK 462
V RKW+ G G P + +LP+
Sbjct: 361 AVMAVRKWIATHGSGGPAWDKDCDPTLPE 389
>gi|83317156|gb|ABC02752.1| chlorophyll synthase [Phyllostachys edulis]
Length = 541
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 41/335 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C Q+ C HR L G + GR++
Sbjct: 220 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNGGRIQ 279
Query: 188 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ +GKC K+P + +I C E +G+VW+W P + P
Sbjct: 280 CPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCF------EQEGMVWIWPGDDPPKSTIPS 333
Query: 245 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
LP R GF + ELP H +LL+NL+D AH P + ++ + + P
Sbjct: 334 LLP------RSGFTIHAEIVMELPVRHGLLLDNLLDTAHAPFT---LTFTFAKGWSVPSL 384
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYS 355
E + G W + + F PC++ + E + H
Sbjct: 385 VEFLAPSPL-LPGYWDLSQ-----MIVEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLH 438
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEV 413
L +C P+ + K+ L+ R + +PW+K P + S A KV +D+ + Q E
Sbjct: 439 Q-LHVCLPSSRNKTRLLYRM-SLDFAPWLKHIPFMHLLWSYFAEKVLNEDLRLVLGQQER 496
Query: 414 LLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
++ ++ S D YR+W D G
Sbjct: 497 MIN----GANVWNWPVSYDKLGIRYRQWRDAVERG 527
>gi|148555200|ref|YP_001262782.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148500390|gb|ABQ68644.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 367
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 34/238 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +V D+ L + ++Q++LY+ GEL + CPHR A L G+++ +E
Sbjct: 8 WYVAAWSDEVSDNL-LTRRILNEQVLLYRTEAGELVATANTCPHRFAPLHLGKVVGDAIE 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F GEG+CV P D +IP A +RTY + E G W+WM + +P
Sbjct: 67 CPYHGLRFNGEGRCVFNPD--GDGRIPAGARLRTYPITERLGAAWIWMGDPARADLAMIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT---DYSAK--------- 295
FE P ++ V + + ++ + +NLMD AH+ + H + D +
Sbjct: 125 DFEFLEDPSYRTVKGVLHVRANYRYINDNLMDEAHLHMVHHNSLACDMVRRAKTELVKDE 184
Query: 296 ----------REDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLR--FEAPCVLQNN 341
R+ A P F++ R RG + +G+M +++ ++APC ++NN
Sbjct: 185 GGTIWANRYGRDGAPPAIFDMMWRMTRG-------DYEGTMDHWVEGGWKAPCFVRNN 235
>gi|160897586|ref|YP_001563168.1| Rieske (2Fe-2S) domain-containing protein [Delftia acidovorans
SPH-1]
gi|160363170|gb|ABX34783.1| Rieske (2Fe-2S) domain protein [Delftia acidovorans SPH-1]
Length = 372
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 145/336 (43%), Gaps = 30/336 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ +V DAPLG+ + DQ +VL++D +G +R DRCPHR A+LS G++ +G LE
Sbjct: 44 WHPVAQAHEV-VDAPLGVQLLDQPLVLWRDPQGLVRVFVDRCPHRGARLSMGRVENGHLE 102
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ----KTPPNP 243
C YHGWQF G+CVK+P LP+ P S CV+ +E +E+ G+VWV ++ P
Sbjct: 103 CPYHGWQFADSGQCVKVPALPSFTP-PPSQCVKAFEAQEAYGLVWVRLATGEELSAVPAL 161
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISH-------DRTDY 292
L F + ++ PYD + ++EN +D +H H D T
Sbjct: 162 AALAALPAFEAEADAHLRKLNCGPYDVAASAPRIIENFLDMSHFGFVHEGWLGSRDATAI 221
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAP--CVLQNNRESVDNKTG 350
A + G T + AP VL ES + G
Sbjct: 222 EAYAVETTATGVLATGCKAVQPQSNLHSTSAAEVEYTYEVTAPYAAVLTKLPESGTTRAG 281
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
+ S LF+C P S + R PD + +F QD L SQ
Sbjct: 282 WRE-SIALFIC-PVTPETSRVWFRLAVADFDS-----PDAQLQEFQHTIFCQDQPVLESQ 334
Query: 411 NEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAG 446
L P E++ + D + YR+++ +G
Sbjct: 335 QPKCLPLD-PRAEMH---SAADRMSSAYRRYLRASG 366
>gi|333916146|ref|YP_004489878.1| Rieske (2Fe-2S) domain-containing protein [Delftia sp. Cs1-4]
gi|333746346|gb|AEF91523.1| Rieske (2Fe-2S) iron-sulfur domain protein [Delftia sp. Cs1-4]
Length = 338
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 144/339 (42%), Gaps = 33/339 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ +V D APLG+ + DQ +VL++D +G +R DRCPHR A+LS G++ +G LE
Sbjct: 7 WHPVAQAHEVVD-APLGVQLLDQPLVLWRDPQGLVRVFVDRCPHRGARLSMGRVENGHLE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ-------KTP 240
C YHGWQF G+CVK+P LP+ P S CV+ +E +E+ G+VWV ++
Sbjct: 66 CPYHGWQFADSGQCVKVPALPSFTP-PPSQCVKAFEAQEAYGLVWVRLATGEELSAVPAL 124
Query: 241 PNPDKLPWFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISH-------DR 289
L F + ++ PYD + ++EN +D +H H D
Sbjct: 125 AALAALAALPAFEAEADAHLRKLNCGPYDVAASAPRIIENFLDMSHFGFVHEGWLGSRDA 184
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAP--CVLQNNRESVDN 347
T A + G T + AP VL ES
Sbjct: 185 TAIEAYAVETTATGVLATGCKAVQPQSNLHSTSAAEVEYTYEVTAPYAAVLTKLPESGTT 244
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFL 407
K G + S LF+C P S + R PD + +F QD L
Sbjct: 245 KAGWRE-SIALFIC-PVTPETSRVWFRLAVADFDS-----PDAQLQEFQHTIFCQDQPVL 297
Query: 408 SSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAG 446
SQ L P E++ + D + YR+++ +G
Sbjct: 298 ESQQPKCLPLD-PRAEMH---SAADRMSSAYRRYLRASG 332
>gi|317053494|ref|YP_004118628.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Pantoea sp.
At-9b]
gi|316952599|gb|ADU72072.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pantoea sp. At-9b]
Length = 363
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 142/346 (41%), Gaps = 51/346 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ ++++ D P + ++QIVL+++ + ++ D C HR LS G+++DG +
Sbjct: 37 WHPVAYSEEI-QDQPYSSRLLNEQIVLWRNKENSIQAVADLCIHRGTALSIGKVVDGEIM 95
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F G+G C IPQ IP A V Y+ +E G+VWV + PD
Sbjct: 96 CPYHGWRFRGDGACTMIPQRENPRHIPDKARVTAYQAQERYGIVWVALDTPLWNIPD--- 152
Query: 248 WFENFARPGFQDVST-IHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
F P F +ST ++ D S LEN D H P H +R E
Sbjct: 153 -IPEFDEPEFHVISTGPYDWQSDASRQLENFTDFGHFPWVHTGLLGDPERVIVPKYQVET 211
Query: 307 TERTDR-----------GFAGQWGREKDGSMP---NFLRFEAP--CVLQNNRESVDNKTG 350
E R G A WGREK +P ++ P VL+ + D
Sbjct: 212 DEHVMRYHFMRPEAPQAGKASVWGREKKDVLPVRHSYYELHLPYTIVLRQDWGGADK--- 268
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
LF+ +P G+ KS +R Y H +V ++ + Q
Sbjct: 269 ----MVHLFVSQPIGKDKSRAFLRTARN------------YAHDQDPRVLQEFTDIVLDQ 312
Query: 411 NEVLLKEKVP-------TKELYFNLRSIDTWVAEYRKWMDKAGHGM 449
++ +++ + P EL+ + D YRK M G +
Sbjct: 313 DQTIVESQRPEFVPFDLADELHLDF---DLVAINYRKLMRATGLAL 355
>gi|397570853|gb|EJK47493.1| hypothetical protein THAOC_33779, partial [Thalassiosira oceanica]
Length = 706
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 198/502 (39%), Gaps = 116/502 (23%)
Query: 108 ASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG--------- 158
A + ++ GE ++ WT+ WYPL + + P +F +V++ DG
Sbjct: 128 AEDPQADGEEE--EFVWTKNWYPLVPVEILDLAKPHKFRLFGTDVVVWNDGPLDNGGGTF 185
Query: 159 -------------KGELRCHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKI 204
+G R D CPHR LSEG++ DG L C YHGW+F+G+GK V +
Sbjct: 186 QPKKDRPKNAKKSEGTWRVFVDSCPHRRVPLSEGRIEDDGSLLCSYHGWRFDGDGKAVAV 245
Query: 205 PQLPAD-----AKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK----LPWFENFARP 255
PQ+ ++ P+S C +Y V G+++VW + + +P + F +
Sbjct: 246 PQVDSNELELIKSNPKSDC-GSYPVTIVDGLMYVWPETGSDARIESALADVPVNDRFDQA 304
Query: 256 -GFQDVS------TIHELPYDHSILLENLMDPAHIPISHDRT------DYSAKREDAQPL 302
+D S + ELPY H LEN++DPAH+PISH D + + +PL
Sbjct: 305 DAVKDGSVWKGPWSYRELPYGHDYFLENVVDPAHVPISHHNVVGSRYGDQTLNLKTGKPL 364
Query: 303 ---GFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPC-VLQNNRESVDNKTGEKHYSTGL 358
GF + D AG GS F+AP VL + K + Y++
Sbjct: 365 DKTGFSIVSPGDAANAG-------GSSTT---FKAPSQVLIEAKFGDGAKQWLELYTSPS 414
Query: 359 --FLCRPTGQGKSMLIVRFGTTGTSPWIKLF----PDWYFHQSASKVFEQDMGFLSSQNE 412
C G+ M+I + + G ++ F P W H A QD FL Q
Sbjct: 415 RPGFCNHVGR---MVIQKDASGGMPQLLRAFTAPLPKWLNHLLAPSFLNQDALFLHGQER 471
Query: 413 VL-LKEKVPTKELYFNLRSIDTW------------VAEYRKWMDKAGHGMPYYFGHSTIS 459
L E+ T ++ D++ V +R WM K G G + G T
Sbjct: 472 SLTFGEEYVTSRPQTGKKAGDSYASAVMPCSADRGVMMFRSWMAKYGKGFIPFQGDKT-- 529
Query: 460 LPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNT 519
+P V V + + + H HCK C A++
Sbjct: 530 MPPVDNNV----------------------------VFDVWNSHTKHCKYCLGALRNIGR 561
Query: 520 WKNSLSTAAALLTAL--AILGA 539
+ A+AL+ +L ILG
Sbjct: 562 IRAMSFLASALVASLRPRILGV 583
>gi|428312063|ref|YP_007123040.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428253675|gb|AFZ19634.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 353
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V PLG+T++ Q IVLY+D G + +DRCPHR KLS G +I RLE
Sbjct: 23 WYVVARSTEV-QTQPLGVTLWHQPIVLYRDNSGGVHALEDRCPHRQVKLSHGCVIGDRLE 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-----MSQKTPPN 242
C YHGWQF+ G+C +P L A+ K+P +RTY V E G +W++
Sbjct: 82 CHYHGWQFQSSGECAAVPYLAANQKLPNCK-IRTYPVHEQDGFIWLFPGDVETLHSAQIQ 140
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS-AKREDAQP 301
P +P +E+ + ++ E +S L+ENLMD H + D ++ A ED +
Sbjct: 141 PMGVPEWEHL---NYIATVSVIECKAHYSYLIENLMDMYHGHLHQDWQAWTDAVLEDIE- 196
Query: 302 LGFEVTERTDRGFAGQ 317
E R D + Q
Sbjct: 197 ---EKDNRVDVHYQAQ 209
>gi|299471141|emb|CBN78998.1| Rieske (2Fe-2S) region rieske 2Fe-2S domain protein, ISS putative
[Ectocarpus siliculosus]
Length = 487
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 175/444 (39%), Gaps = 81/444 (18%)
Query: 142 PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGK 200
PL + + +V++++ + C DRCPHR A L+EG++ DG L C YH W+F+ +GK
Sbjct: 14 PLRGKLLGKDLVVWRNKEERWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGK 73
Query: 201 CVKIPQLP---ADAKIPRSACVRTYEVKESQGVVWVW---------MSQKTP----PNPD 244
C+ IPQ D P+ AC + Y + +QG+VWVW S TP P+ D
Sbjct: 74 CLSIPQSDRGGKDEAQPK-ACAKVYPTQVAQGMVWVWGENGPDAGLESALTPAQLIPDLD 132
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
E+ R V ++L Y +EN++DP+H+ +SH + P+
Sbjct: 133 DKEGVES-GRVMLASVGQ-NDLAYGWDTFMENVVDPSHVTVSHHGI-AGDRYTGPSPIDL 189
Query: 305 EVTER----TDRGFAGQWGREKDGSMP--NFLRFEAPCVLQNNRESVDNKTGEKHYSTGL 358
+ + R T GF ++ +D S+P + + F+ PC++ N + K Y T
Sbjct: 190 KPSARWPVPTKDGFEFEF---RDDSLPADSTVTFQPPCLVINEAKDSAGKLLLIIYGTPT 246
Query: 359 FLCRPTGQGKSMLIVRFGTT----------------------GTSPWIKLFPDWYFHQSA 396
G+S + F T+ + P W H +
Sbjct: 247 RPGWVRLLGRSAYVHTFAPNSKEAKVQAKEDKRNGVNKSRLQATANVVTKLPSWLQHVTG 306
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTK---ELYFNLRSIDTWVAEYRKWMDKAGHGMPYYF 453
S QD+ FL Q ++L + + F + D V R+W+ K G G P +
Sbjct: 307 SLFLHQDLVFLHYQEKILASAGCDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWD 366
Query: 454 GHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSA 513
+ +LP E L N Y H C C+ A
Sbjct: 367 KNCDRTLPPRERNREA--------------------------LFNVYENHTKSCTSCQGA 400
Query: 514 VKAFNTWKNSLSTAAALLTALAIL 537
+K + TAA + A+L
Sbjct: 401 LKNVKKMLTTAKTAAVISFTWAVL 424
>gi|443316742|ref|ZP_21046175.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783653|gb|ELR93560.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 362
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
WY + +V D P G+T++ Q+IVL++D +++ +DRCPHR +LS G++++G
Sbjct: 27 VNHWYAVARADEVTADKPRGVTLWQQKIVLFRDRNHQVQALEDRCPHRQVQLSHGEVVNG 86
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
+EC+YHGW+F+ G C +P L K+P + +R Y V+E G +WV+ + +
Sbjct: 87 EVECVYHGWRFDATGACTHVPYLGEAQKLP-TCTLRRYPVREQDGFIWVFPGDEARLAAE 145
Query: 245 KLPWFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAH 282
K+ E A P + ++ I ++ +S L+ENLMD H
Sbjct: 146 KI---EPLALPEWDHLNYIATVSLIDVESHYSFLIENLMDMYH 185
>gi|241765642|ref|ZP_04763595.1| Rieske (2Fe-2S) domain protein [Acidovorax delafieldii 2AN]
gi|241364522|gb|EER59599.1| Rieske (2Fe-2S) domain protein [Acidovorax delafieldii 2AN]
Length = 326
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 96/168 (57%), Gaps = 18/168 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRL 186
W+P+ L DV PL + +Q +VL++D G ++ D+CPHR A+LS G++ DGRL
Sbjct: 7 WHPVALAVDVAQ-TPLAAQLLEQALVLWRDASGAVQALADQCPHRGARLSLGRVTADGRL 65
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
EC YHGWQF G G+C+ +P LP+ A P + C R + +E+ G+VWV M+ P +
Sbjct: 66 ECPYHGWQFAGGGQCMHVPALPSFAP-PATHCARHFAAREAHGLVWVRMA----PGDGAV 120
Query: 247 PWF--ENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 288
P F E+ AR + ++ PYD ++EN +D +H H+
Sbjct: 121 PTFAAEDDAR-----LRKLNCGPYDVEASAPRIIENFLDMSHFGFVHE 163
>gi|16330819|ref|NP_441547.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|383322561|ref|YP_005383414.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325730|ref|YP_005386583.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491614|ref|YP_005409290.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436881|ref|YP_005651605.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|451814977|ref|YP_007451429.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|1653312|dbj|BAA18227.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|339273913|dbj|BAK50400.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|359271880|dbj|BAL29399.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275050|dbj|BAL32568.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278220|dbj|BAL35737.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451780946|gb|AGF51915.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
Length = 357
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 16/161 (9%)
Query: 141 APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 200
PLG+ ++++ I +Y+D G++R +DRCPHR KLSEG+++ LEC YHGWQF+ +G
Sbjct: 36 GPLGIVLWEKAIAIYRDQDGQVRAVEDRCPHRQVKLSEGKVLGNNLECAYHGWQFDAQGH 95
Query: 201 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWF--ENFARPGFQ 258
C KIP D K+P +RTY V+E G +W++ P + D L E A P +
Sbjct: 96 CAKIPYFSEDQKLP-PCRLRTYPVQEKDGFIWLY-----PGDLDHLASHGPEPLAIPEWH 149
Query: 259 DVSTI-----HELPYDHSILLENLMDPAHIPISHDRTDYSA 294
++ I + P S L+ENLMD H H +Y A
Sbjct: 150 HLNHIGSFAAFDCPGHFSYLIENLMDMYH---GHLHDNYQA 187
>gi|218441166|ref|YP_002379495.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218173894|gb|ACK72627.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 349
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 89/158 (56%), Gaps = 12/158 (7%)
Query: 142 PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 201
P+ +T++ Q+IV+Y+D G + +D CPHRL KLS+G ++ +EC YHGW+F GEGKC
Sbjct: 32 PISITLWYQKIVIYRDQAGMIHALEDSCPHRLVKLSQGAIVGNEIECAYHGWRFNGEGKC 91
Query: 202 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-----PDKLPWFENFARPG 256
IP L + K+P +R+Y V+E G +WV+ K N P +P +E+
Sbjct: 92 TLIPYLNENQKLPPCQ-IRSYPVQELDGFIWVFPGDKNYLNQESVQPMGVPEWEHL---N 147
Query: 257 FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
+ +I + P S L+ENLMD H H +Y A
Sbjct: 148 YIATVSIIDCPSHFSFLIENLMDMYH---GHLHDNYQA 182
>gi|254414106|ref|ZP_05027874.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179242|gb|EDX74238.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 357
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 8/204 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + V P + + +Q+ VLY++ G++ +D+CPHR A LS G + DG L
Sbjct: 6 WYVCEFSSAV-TQKPKQILMLNQRFVLYRNSDGQVVALKDQCPHRGAALSLGWVEDGCLR 64
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+ +GKC+ IP + IP+ A V +Y V+E G+VW++ P +P
Sbjct: 65 CPYHGWKFQADGKCIDIPANAPEIPIPKKARVDSYLVQEKYGLVWLFYGDLPPEKRPPIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
+ F P + + ++ ++ ++EN +D AH+ I H + + E+ + ++V
Sbjct: 125 YLPEFTDPKMRSIVADVKVNNHYTRVIENALDLAHVYIVHGNSVGAGLTENPRIETYQVH 184
Query: 308 ERTDRGFAGQWGREKDGSMPNFLR 331
E +WG NF +
Sbjct: 185 EE-------EWGIRATTKFVNFTK 201
>gi|365097945|ref|ZP_09331712.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
sp. NO-1]
gi|363413190|gb|EHL20398.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
sp. NO-1]
Length = 326
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 101/192 (52%), Gaps = 27/192 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRL 186
W+P+ L DV AP+ + + +Q +V+++D G ++ D+CPHR A+LS G++ G+L
Sbjct: 7 WHPVALVGDVAQ-APVAVQLLEQPVVVWRDAAGAVQAFADQCPHRGARLSLGRVTPQGQL 65
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
EC YHGWQF G+C +P LPA P C R +E +E+ G+VWV M Q T L
Sbjct: 66 ECPYHGWQFASGGRCTHVPALPAFVP-PPGHCARAFEAREAHGLVWVRMEQGT----TAL 120
Query: 247 PWFENFARPGFQDVSTIHEL---PYDHSI----LLENLMDPAHIPISH-------DRTDY 292
P F+ +D + + +L PYD + ++EN +D +H H D T
Sbjct: 121 PAFKA------EDDARLRKLNCGPYDVAASAPRIIENFLDMSHFGFVHEGWLGSRDATAI 174
Query: 293 SAKREDAQPLGF 304
R +A P G
Sbjct: 175 DDYRVEATPTGL 186
>gi|407961823|dbj|BAM55063.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
Length = 345
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 16/161 (9%)
Query: 141 APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 200
PLG+ ++++ I +Y+D G++R +DRCPHR KLSEG+++ LEC YHGWQF+ +G
Sbjct: 24 GPLGIVLWEKAIAIYRDQDGQVRAVEDRCPHRQVKLSEGKVLGNNLECAYHGWQFDAQGH 83
Query: 201 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWF--ENFARPGFQ 258
C KIP D K+P +RTY V+E G +W++ P + D L E A P +
Sbjct: 84 CAKIPYFSEDQKLP-PCRLRTYPVQEKDGFIWLY-----PGDLDHLASHGPEPLAIPEWH 137
Query: 259 DVSTI-----HELPYDHSILLENLMDPAHIPISHDRTDYSA 294
++ I + P S L+ENLMD H H +Y A
Sbjct: 138 HLNHIGSFAAFDCPGHFSYLIENLMDMYH---GHLHDNYQA 175
>gi|299532048|ref|ZP_07045443.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
gi|298719963|gb|EFI60925.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
Length = 324
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 98/165 (59%), Gaps = 13/165 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ + +V AP + + +Q +VL+++ +G ++ DRCPHR A+LS G++ +G LE
Sbjct: 7 WHPVAQSSEVVS-APFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVENGHLE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF G+CVK+P +P D P S VR +EV+E+ G++WV + P+ +LP
Sbjct: 66 CPYHGWQFSSGGQCVKVPAVP-DFTPPASQRVRAFEVQEAYGLIWV----RLEPSDSQLP 120
Query: 248 WFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 288
FA + + ++ PYD + ++EN +D +H H+
Sbjct: 121 ---VFAAETDEHLRKVNCGPYDVAASAPRIIENFLDMSHFGFVHE 162
>gi|384247255|gb|EIE20742.1| hypothetical protein COCSUDRAFT_67210 [Coccomyxa subellipsoidea
C-169]
Length = 555
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 34/248 (13%)
Query: 70 AHKLRKRTEPKLTKCHAVTDMSSSAVPT-----PDDHKVLVGPASEEESRGERRV----A 120
A+ LR R C A + S + H VL ++ G+ +V
Sbjct: 27 ANSLRPRVSKNTVNCKASSWRSQRQAEVRCRFQQNGHSVLA------DTSGDTKVHLDDD 80
Query: 121 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQ 180
+ W WYP+ + DV P+ +T+ +++VL++ GE C DRC HR A LSEG+
Sbjct: 81 KFSWERNWYPVAILADVDGSKPIPVTLLGKKLVLWQGSDGEWNCVVDRCAHRYAPLSEGR 140
Query: 181 LIDGRLECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
+ DG ++C YHGWQ+ G+G+C +IPQ A A SACV + V+ G VWVW
Sbjct: 141 VKDGDIQCAYHGWQYNGQGQCTRIPQAEDASACCSSSACVEAFPVQLRAGAVWVWPDSSP 200
Query: 240 PPNPDK---LPWFENFARPGFQDVS-TIHELPYDHSILLENLMDPA-------------- 281
D LP + + V I + Y ++ L+E L+DP+
Sbjct: 201 SAARDSSLVLPSVDTVLEESLEYVDWYIRDFYYGYAGLMEMLLDPSACSFTLHGIGLFNR 260
Query: 282 HIPISHDR 289
H+PI D+
Sbjct: 261 HVPIPMDQ 268
>gi|238767622|dbj|BAH66650.1| chlorophyllide a oxygenase [Klebsormidium flaccidum]
Length = 322
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 48/331 (14%)
Query: 129 YPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLEC 188
YP+ +++V + + F++ V+++D G+ C +D C HR LS G L+DG+++C
Sbjct: 1 YPVAFSENVDSKTMVPIDCFNEPWVIFRDQDGKAGCIRDECAHRACPLSLGALVDGKVQC 60
Query: 189 LYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDKL 246
YHGW++ G+C +P+ + P S VR E G++W+W K P PD
Sbjct: 61 PYHGWEYTTSGECT---HMPSTVQAPTS--VRALPCVEQDGMIWIWPGDKVPEATLPDLS 115
Query: 247 PWFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
P G+ TIH E+P +H +L+ENL+D AH P +H T + P
Sbjct: 116 P------PSGY----TIHAQITLEVPVEHGLLVENLLDLAHAPFTHTTT---FAKGWPVP 162
Query: 302 LGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVL-------QNNRESVDNKTGEKHY 354
+ +G W P + F PC++ Q + S N ++
Sbjct: 163 NSVKFKTAAAAALSGFW-----DPYPIDMEFRPPCMVFSTIGLSQPGKLSGTNTKDCPNH 217
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQ----SASKVFEQDMGFLSSQ 410
L +C P+ G + L+ R + + W K P + H+ A++V +D+ + Q
Sbjct: 218 LHQLHVCVPSKTGTTRLLYRM-SLDFAWWAKYVP--FIHKLWEYMANQVLSEDLRLVEGQ 274
Query: 411 NEVLLKEKVPTKELYFNLRSIDTWVAEYRKW 441
+ +++ ++ + + D YR+W
Sbjct: 275 QDRMIR----GANVWNHPVAYDKLGVRYRRW 301
>gi|418528828|ref|ZP_13094770.1| Rieske iron-sulfur protein [Comamonas testosteroni ATCC 11996]
gi|371454089|gb|EHN67099.1| Rieske iron-sulfur protein [Comamonas testosteroni ATCC 11996]
Length = 324
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 98/165 (59%), Gaps = 13/165 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ + DV AP + + +Q +VL+++ +G ++ DRCPHR A+LS G++ +G LE
Sbjct: 7 WHPVAQSSDVVS-APFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVENGHLE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF G+CVK+P +P D P S V+ +EV+E+ G++WV + P+ +LP
Sbjct: 66 CPYHGWQFSSGGQCVKVPAVP-DFTPPASQRVQAFEVQEAYGLIWV----RLEPSDSQLP 120
Query: 248 WFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 288
FA + + ++ PYD + ++EN +D +H H+
Sbjct: 121 ---VFAAETDEHLRKVNCGPYDVAASAPRIIENFLDMSHFGFVHE 162
>gi|81300845|ref|YP_401053.1| hypothetical protein Synpcc7942_2036 [Synechococcus elongatus PCC
7942]
gi|81169726|gb|ABB58066.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 334
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 1/160 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + D+ P+ ++ DQQ+V+Y+ G++ DRCPHR A L+ GQ+ +
Sbjct: 13 WYAIAASTDL-GSTPIAASLLDQQLVVYRTTAGQVVVLDDRCPHRGASLACGQVKGNAIA 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF+ +G C +IP A A+IP++A V +Y V+E G++WV+ + L
Sbjct: 72 CPYHGWQFDLDGHCAQIPSQQASARIPQAAKVASYPVQERYGLIWVFTGDRDRAAQTPLW 131
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ + G++ V + D+ + EN MD AH P H
Sbjct: 132 ELPEYDQAGWRVVQGQFDWAADYRRVTENGMDVAHSPFVH 171
>gi|56752067|ref|YP_172768.1| hypothetical protein syc2058_d [Synechococcus elongatus PCC 6301]
gi|56687026|dbj|BAD80248.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 340
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 1/160 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + D+ P+ ++ DQQ+V+Y+ G++ DRCPHR A L+ GQ+ +
Sbjct: 19 WYAIAASTDL-GSTPIAASLLDQQLVVYRTTAGQVVVLDDRCPHRGASLACGQVKGNAIA 77
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF+ +G C +IP A A+IP++A V +Y V+E G++WV+ + L
Sbjct: 78 CPYHGWQFDLDGHCAQIPSQQASARIPQAAKVASYPVQERYGLIWVFTGDRDRAAQTPLW 137
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ + G++ V + D+ + EN MD AH P H
Sbjct: 138 ELPEYDQAGWRVVQGQFDWAADYRRVTENGMDVAHSPFVH 177
>gi|172039536|ref|YP_001806037.1| cell death suppressor protein [Cyanothece sp. ATCC 51142]
gi|354552200|ref|ZP_08971508.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
gi|171700990|gb|ACB53971.1| putative Rieske [2Fe-2S] domain-containing cell death suppressor
protein [Cyanothece sp. ATCC 51142]
gi|353555522|gb|EHC24910.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
Length = 461
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 179/450 (39%), Gaps = 73/450 (16%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSE 178
++ + W++ WYP+ + P +T+ +++V+++ + D+CPH+LA+LS
Sbjct: 2 ISQFSWSQNWYPISPLSYLDPSVPTPITILGKKLVIWQTKNQQWVVMDDQCPHKLAQLSF 61
Query: 179 GQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVV 231
G++ DG L C +HGW F +G C KIP L + I ++AC V Y + QG++
Sbjct: 62 GKIQADGTLMCRHHGWCFNEQGNCTKIPMLVEEEAI-KTACNSSRSQVTVYPTQVKQGLL 120
Query: 232 WVW-MSQKTPPNPDKLPWFENFARPGFQDVST---IHELPYDHSILLENLMDPAHIPISH 287
WVW +Q+T +L G +T + E+P +++ LE+ DP+H H
Sbjct: 121 WVWPDNQETAFEDCQLKEPAIIPECGLDVTATDWHLSEVPVGYTVSLESSFDPSHAQFLH 180
Query: 288 DR------------TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAP 335
+ T + E + GF + F + M +F P
Sbjct: 181 EGLAGFSPEKTIPITSFKTVSEISAEAGFTLKHSGYNIF--------NQDMEATRQFSPP 232
Query: 336 CVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPD------ 389
C N G + F+ PT G+ I +F T+ + D
Sbjct: 233 CC---NTTIYRYPNGNMMLAQLYFI--PTEPGRCRYIGKFITSMNFSQKNIILDRLPKQL 287
Query: 390 --WYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGH 447
+ H S ++ +QD+ + +Q + + + P + YF S D + +R+W+D+
Sbjct: 288 RTGFKHLSNYQLSDQDLTVMHAQETLQMTVEKPWHKSYFLPASADVGIITFRQWLDRFAG 347
Query: 448 GMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHC 507
G P + + + P P E L R+ RH +C
Sbjct: 348 GKPAW--ENAKAHPYQPLTEEQ--------------------------LYERWHRHTKYC 379
Query: 508 KGCRSAVKAFNTWKNSLSTAAALLTALAIL 537
CR++V + + + + +L
Sbjct: 380 PSCRASVDFLGKLQQYSRYSMIIFSVFTLL 409
>gi|158340878|ref|YP_001522046.1| hypothetical protein AM1_D0239 [Acaryochloris marina MBIC11017]
gi|158311119|gb|ABW32732.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 234
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 10/184 (5%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGEL-RCHQDRCPHRL 173
G + + W + W+P+ KD+ T+ +Q +V++ D E R D+CPHRL
Sbjct: 32 GGEDPSQFTWQDAWHPIAYVKDLDPSQLSTFTLLEQDLVIWWDQSAETWRVFADQCPHRL 91
Query: 174 AKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGV 230
A LSEG+L DG LEC YHGW F G G+C +IPQ + +S ACV++ QG+
Sbjct: 92 APLSEGRLTADGLLECPYHGWAFSGLGQCCRIPQQVGGQSVEQSRRACVQSLPTTVRQGM 151
Query: 231 VWVWMSQKT----PPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 286
++V+ Q P P P E A + + + +LP+D LLEN++DP+H+P +
Sbjct: 152 LFVYPGQSERAAHIPIPLVAPLEE--APNKWIVLDGVRDLPFDVLTLLENVLDPSHLPFA 209
Query: 287 HDRT 290
H R+
Sbjct: 210 HHRS 213
>gi|392307718|ref|ZP_10270252.1| oxidase [Pseudoalteromonas citrea NCIMB 1889]
Length = 372
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 94/164 (57%), Gaps = 6/164 (3%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + +DV P+G+ ++ +VLY+D KGEL C D+CPH+ LS G+ +
Sbjct: 5 QWYAISRIQDV-KKKPIGIKRLNKLLVLYRDTKGELVCMDDKCPHKGVMLSRGKQHGDII 63
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP-DK 245
C YHG+QF+ +G CV +P L + +P+ CV+TY+VKE G++W W P N +
Sbjct: 64 ACPYHGFQFDQKGDCVHMPVLGKNGDVPKGMCVKTYKVKEEFGLIWFWYGDLMPENDYPE 123
Query: 246 LPWFENFARPGFQDVSTIH--ELPYDHSILLENLMDPAHIPISH 287
+P F+ F ++ + + + P +++ +E++ + HIP H
Sbjct: 124 VPMFKQFKE--YKGYYSFYGWDAPINYTRYVESVCEIYHIPFVH 165
>gi|170078842|ref|YP_001735480.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7002]
gi|169886511|gb|ACB00225.1| Rieske [2Fe-2S] domain protein; synechoxanthin biosynthesis
[Synechococcus sp. PCC 7002]
Length = 367
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 34/194 (17%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D PLG T++++ VLY+D G+++ +DRCPHR KLS GQ++ LEC YHGWQF+ G
Sbjct: 43 DQPLGFTLWNEDFVLYRDQAGQVQALEDRCPHRQVKLSSGQVVGDNLECAYHGWQFDASG 102
Query: 200 KCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPNPDKL----------PW 248
C +P L + K R AC +RT V+E G +WV+ P +P++L P
Sbjct: 103 TCAHVPYLAENQK--RPACKIRTLPVREQDGFIWVF-----PGDPERLTDEAIQPLPIPE 155
Query: 249 FENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDY----SAKREDAQPLGF 304
+E+ V+TI + S L+ENLMD H H +Y SAK ED Q
Sbjct: 156 WEHLNY--IVSVTTI-DCEGHFSYLIENLMDMYH---GHLHDNYQAWASAKLEDIQ---- 205
Query: 305 EVTE-RTDRGFAGQ 317
VTE R D + Q
Sbjct: 206 -VTEQRVDAHYEAQ 218
>gi|427707274|ref|YP_007049651.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Nostoc sp.
PCC 7107]
gi|427359779|gb|AFY42501.1| Rieske (2Fe-2S) iron-sulfur domain protein [Nostoc sp. PCC 7107]
Length = 350
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 6/168 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V + P+G+ ++ Q I LY+D G++ +DRCPHR KLS GQ+I LE
Sbjct: 23 WYVVAPSHEVTHE-PVGVIIWHQAIALYRDSTGKIHALEDRCPHRQVKLSHGQVIGNELE 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-PDKL 246
C YHGW+F G+C ++P L A+ K+P +R Y VKE G +W++ N P L
Sbjct: 82 CAYHGWRFNSSGECTEVPYLAANQKLPNCQ-IRRYPVKEQDGFIWLFPGDGEHSNQPLGL 140
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
P +E+ V+ I+ + +S L+ENLMD H + D ++A
Sbjct: 141 PEWEHLNY--IASVAVINCQAH-YSYLIENLMDMYHGHLHQDLQAWAA 185
>gi|5478805|dbj|BAA82483.1| chlorophyll b synthase [Prochloron didemni]
Length = 276
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 24/284 (8%)
Query: 135 KDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQ 194
++V P+ +FD+ +L++D + C DRC HR LS G++++GR++C YHGW+
Sbjct: 1 QNVNTTTPMPFELFDRSWILFRDRNSNIGCIHDRCAHRACTLSLGKVVNGRVQCAYHGWE 60
Query: 195 FEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL-PWF-ENF 252
+ EG C +P A V+ E G++WVW P KL P ENF
Sbjct: 61 YNTEGTCEVMPSCKQT-----KAAVKALPAIEQSGMIWVWPGSGVPGELPKLAPAIPENF 115
Query: 253 ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDR 312
EL +H + +ENL+D AH P +H T ++ + F +T
Sbjct: 116 TL----QAEITMELDVEHGLFMENLLDLAHAPFTHTGT-FAKGWPVPDFVRFANLPKTP- 169
Query: 313 GFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLI 372
G W P + FE PC + + G + + +C P G+GK+ L+
Sbjct: 170 -LTGHW-----DPYPIDMSFEPPCYVISTIGLRGRDCGRHLHQ--VHVCLPKGKGKTRLL 221
Query: 373 VRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVL 414
R W++ P + ++ A +V +D+ + Q + L
Sbjct: 222 YRLALDFYK-WLRFVPGMNLFWEHMAQRVIGEDIRLVRGQQKSL 264
>gi|407937805|ref|YP_006853446.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
sp. KKS102]
gi|407895599|gb|AFU44808.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
sp. KKS102]
Length = 327
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 13/166 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRL 186
W+P+ L++ V APL + + +Q +VL++D G + D+CPHR A+LS G++ G+L
Sbjct: 7 WHPVALSEAVAAQAPLAVQLLEQPVVLWRDSGGAVHALADQCPHRGARLSLGRVTPQGQL 66
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
EC YHGWQF G+C +P LP+ P + C R +E +E+ G+VWV + P L
Sbjct: 67 ECPYHGWQFAAGGQCTHVPALPSFVP-PATHCARHFETQEAYGMVWV----RIAPGEQGL 121
Query: 247 PWFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 288
P FA G + ++ PYD + ++EN +D +H H+
Sbjct: 122 P---VFAAEGDARLRKLNCGPYDVAASAPRIIENFLDMSHFGFVHE 164
>gi|297170934|gb|ADI21951.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases, large terminal subunit [uncultured nuHF2
cluster bacterium HF0130_29D04]
Length = 329
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY L+K+VP+ P + + IV ++ KGE+ +DRC HR A LS G + +G +
Sbjct: 9 QWYAAALSKEVPEKEPFARKICGEDIVFFRKPKGEVSALEDRCAHRHAPLSLGLVENGSI 68
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHG F+G G+CV++ P KIP A +++Y V E G VW+W+ + + +
Sbjct: 69 RCQYHGMLFDGNGQCVEV---PGQEKIPSGARIKSYPVAEQDGWVWIWIGKNGSQSVSTI 125
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
P F F + + + ++NL+D +H+ +H + S A+P
Sbjct: 126 PSFPYFDTAKWAGFQKYFHVQGAAQLFVDNLLDLSHLAFTHKSSIGSTSSAVAEP 180
>gi|260223404|emb|CBA33939.1| hypothetical protein Csp_B21530 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 346
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 91/165 (55%), Gaps = 12/165 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ + + DAPL +T+ +Q++VL++D G D+CPHR AKLS G++ GRLE
Sbjct: 27 WHPVMASTSL-TDAPLAITLLEQELVLWRDATGSAHAWADQCPHRGAKLSLGRVCAGRLE 85
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQFE G+CV +P +PA P S V T+ V E+ G++WV Q P LP
Sbjct: 86 CPYHGWQFEAGGQCVHVPAVPAFVP-PASHAVSTHAVVEAYGLLWV---QLQPEAGVPLP 141
Query: 248 WFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 288
F + V PYD + ++EN +D AH H+
Sbjct: 142 AFVAETDTQLRKVLCG---PYDVATSAPRIVENFLDMAHFGFVHE 183
>gi|91781025|ref|YP_556232.1| vanillate demethylase [Burkholderia xenovorans LB400]
gi|91693685|gb|ABE36882.1| Vanillate demethylase [Burkholderia xenovorans LB400]
Length = 353
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG-RL 186
WY ++D+ A LG T+ ++Q+VL++ G + D CPHR A L G+++DG R+
Sbjct: 8 WYAAGWSQDLAAGAMLGRTMLNEQLVLFRADDGTVSALSDICPHRFAPLHLGKIVDGCRI 67
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
+C YH +F+G G CVK P KIP +A ++ Y V E ++WVWM ++ +P +
Sbjct: 68 QCAYHALEFDGTGACVKNPH--GKQKIPAAAKLQAYPVVEKHSLIWVWMGEQAAADPSVI 125
Query: 247 PWFENFA-RPGFQDVSTIHELPYDHS--ILLENLMDPAHIPISHD 288
P F GFQ VS L D S ++++NLMD +H HD
Sbjct: 126 PDFSMLDPDSGFQ-VSRRDWLHMDASYDLVVDNLMDLSHTAFLHD 169
>gi|218245961|ref|YP_002371332.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166439|gb|ACK65176.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 362
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 15/173 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + ++ D PLG+T++D IVLY+D G++ ++RCPHR KLS+G++I LE
Sbjct: 24 WYVVAGSTEIKD-RPLGVTIWDHSIVLYRDTLGKIHALENRCPHRQVKLSDGKVIGNHLE 82
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ-KTPPNPDKL 246
C YHGWQF +G C IP L K+P+ + +Y V+E G +W+++ + N D L
Sbjct: 83 CAYHGWQFNSQGTCHSIPYLNEKQKLPKCQ-INSYPVEELNGFIWLFLGDPQRLENNDIL 141
Query: 247 PWFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDYSA 294
P A P + ++ I E S ++ENLMD H H +Y A
Sbjct: 142 P----LAIPEWDHLNYIATVSVIECRGHFSFVIENLMDMYH---GHLHQNYQA 187
>gi|221065631|ref|ZP_03541736.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|220710654|gb|EED66022.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 324
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 97/165 (58%), Gaps = 13/165 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ + DV AP + + +Q +VL+++ +G ++ DRCPHR A+LS G++ +G LE
Sbjct: 7 WHPVAQSSDVVS-APFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVENGHLE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF G+CVK+P +P D P S V+ +EV+E+ G++WV + P+ +LP
Sbjct: 66 CPYHGWQFSSGGQCVKVPAVP-DFTPPASQRVQAFEVQEAYGLIWV----RLEPSDSQLP 120
Query: 248 WFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 288
FA Q + ++ YD + ++EN +D +H H+
Sbjct: 121 ---VFAAETDQHLRKVNCGSYDVAASAPRIIENFLDMSHFGFVHE 162
>gi|299471143|emb|CBN79000.1| Rieske (2Fe-2S) region [Ectocarpus siliculosus]
Length = 476
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 168/444 (37%), Gaps = 65/444 (14%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGR 185
+WYP+ K V + + + +V++++ +G C DRCPHR A L+EG++ DG
Sbjct: 10 QWYPVLGVKHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGS 69
Query: 186 LECLYHGWQFEGEGKCVKIPQLP---ADAKIPRSACVRTYEVKESQGVVWVWM------- 235
L C YH W+F+ +GKC+ IPQ D P+ AC + Y + +Q ++WVW
Sbjct: 70 LLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPK-ACAKVYPTQVAQDIIWVWAENGPDAG 128
Query: 236 --SQKTPPNPDKLPWF---ENFARPGFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDR 289
S TPP+ LP E A H +L Y ++ENL+DP+H+P +H
Sbjct: 129 LESALTPPH--LLPELDDEEGLASGRVVPQGVQHTDLAYGWDTMIENLVDPSHVPCAHHG 186
Query: 290 TDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAP-----CVLQNNRES 344
+ +D +P+ E + D + P C L +
Sbjct: 187 V-AGDRYKDVRPIDLEPDKEWPVTATVLVENADDAGELKMTLYGVPTKPGWCRLVGRQAY 245
Query: 345 VDNKTGEKHYSTGLFL-CRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQD 403
V + + L + G+ S L+V + + P W H SA QD
Sbjct: 246 VHKYAPKSKEAKALRKENKRLGKKPSELMV------AASIMSKIPQWLMHASAGIFLYQD 299
Query: 404 MGFLSSQNEVLL------KEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHST 457
M L Q++ L + + D V RKW+ G G P +
Sbjct: 300 MVLLHHQDKTLASVGHDGNSTSSYGKAVYTPAPADRAVMAVRKWIATHGSGGPAWDKDCD 359
Query: 458 ISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAF 517
+LP+ EH L + Y H C C A+K
Sbjct: 360 PTLPE----REHKREVLF----------------------DYYEGHTKTCSTCLRALKNI 393
Query: 518 NTWKNSLSTAAALLTALAILGAGR 541
N + TA A+ +L R
Sbjct: 394 NKLLAASKTATAVSCTWGLLRGAR 417
>gi|5478799|dbj|BAA82480.1| chlorophyll b synthase [Marchantia polymorpha]
Length = 282
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 30/283 (10%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D + + F++ VL++ G C +D C HR LS G ++DGR++C YHGW++ G
Sbjct: 6 DIMIPIESFEEPWVLFRGKDGRAGCVRDECAHRACPLSLGTVVDGRIQCPYHGWEYNTGG 65
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDKLPWFENFARPGF 257
KC K+P + P +R E G+VW+W +TP P LP EN+
Sbjct: 66 KCEKMP-----STRPLKTGIRALPCIEQDGMVWIWPGDETPAATLPSLLP-PENYT---- 115
Query: 258 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
+ ELP +H +L+ENL+D AH P +H T ++ + F+ + +G
Sbjct: 116 IHAEIVLELPVEHGLLMENLLDLAHAPFTHTST-FAKGWSVPNMVKFKTPM---QALSGN 171
Query: 318 WGREKDGSMPNFLRFEAPCVLQNN--------RESVDNKTGEKHYSTGLFLCRPTGQGKS 369
W P + F+ PC++ + + + KH L +C P+ +GK+
Sbjct: 172 W-----DPYPIDMAFQPPCMVLSTIGLVKPGKLDGSSTASCSKHLHQ-LHVCMPSSRGKT 225
Query: 370 MLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNE 412
L+ R+ T + + D + A++V +D+ + Q +
Sbjct: 226 RLMYRWLWTLPNGRSMPYIDRVWTHLANQVLNEDLRLVEGQQD 268
>gi|428182347|gb|EKX51208.1| hypothetical protein GUITHDRAFT_159336 [Guillardia theta CCMP2712]
Length = 469
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 158/378 (41%), Gaps = 57/378 (15%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQ 180
+++ ++WYPL + + + P + +F +V++ D + +D CPHRLA LSEG+
Sbjct: 26 FNFKKQWYPLAVIEFLDKKKPHHVQLFGNDLVMWYDKTSDKWNVFEDACPHRLAPLSEGR 85
Query: 181 LI-DGRLECLYHGWQFEGEGKCVKIPQL---PADAKI-PRSACVRTYEVKESQGVVWVWM 235
+ DG L C YHGW+F+ GKC IPQ A A + + AC +Y ++QG++WVW
Sbjct: 86 IEEDGTLLCSYHGWRFDANGKCTLIPQANEKQAQALMSSKRACALSYPAMQAQGLLWVWG 145
Query: 236 SQKTP----------PNPDKLPWFENFARPGF--QDVSTIHELPYDHSILLENLMDPAHI 283
Q P +P + E+ G Q +I ++PY +EN++DPAH+
Sbjct: 146 EQGGPGSDAAIESALKSPALIAELEDPELKGRAQQLTWSIRDMPYGWDFFMENVLDPAHV 205
Query: 284 PISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRE 343
+SH P F + +T R Q G + + F+ L +
Sbjct: 206 TVSHHGI---VGNRYTSPSFFRM--QTTRNATAQ------GGFAHSITFDKSPPLGEGSD 254
Query: 344 SVD-----------NKTGEKHYSTGLFLCRPTGQG-----KSMLIVRFGTTGTSPWIKLF 387
+V ++ S PT G ++V+ +P + F
Sbjct: 255 TVQEFLPPSMVRIKSRFPNGCQSLLALYATPTKPGYVRHIGCQVLVKGEDGALAPGLGFF 314
Query: 388 ----PDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMD 443
P W H AS QDM L Q EK+ Y N++ D V +R W+
Sbjct: 315 ALPMPKWLNHVLASLFLHQDMVLLHHQ------EKILADAGYRNMQ--DKGVTFFRNWLR 366
Query: 444 KAGHGMPYYFGHSTISLP 461
+G + T S+P
Sbjct: 367 VFANGGVPWKAEGTSSMP 384
>gi|17231358|ref|NP_487906.1| hypothetical protein all3866 [Nostoc sp. PCC 7120]
gi|17133000|dbj|BAB75565.1| all3866 [Nostoc sp. PCC 7120]
Length = 351
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V PLG+T++ Q I LY+D +G++ +DRCPHR KLS GQ+I LE
Sbjct: 23 WYVVARSHEVTS-KPLGVTLWHQVIALYRDSEGQIHALEDRCPHRQVKLSHGQVIGNELE 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 246
C YHGW+ G+C +P L + K+P + +R Y VKE G +W++ P P L
Sbjct: 82 CAYHGWRLNHHGECATVPYLAPNQKLP-NCTIRPYPVKEQDGFIWLFPGDGEPSLEPLGL 140
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS-AKREDAQPLGFE 305
P +++ + I +S L+ENLMD H + D ++ A+ +D + E
Sbjct: 141 PEWDHL---NYIASVAIINCQAHYSYLIENLMDMYHGHLHQDLQAWAQAELQDIE----E 193
Query: 306 VTERTDRGFAGQ 317
+R D + Q
Sbjct: 194 NDQRVDAHYQAQ 205
>gi|238767610|dbj|BAH66644.1| chlorophyllide a oxygenase [Picocystis salinarum]
Length = 318
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 135/304 (44%), Gaps = 36/304 (11%)
Query: 155 YKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 214
++D +G+ C D CPHR LS G++IDG + C YHGW+ GEG CV +PQ+ +
Sbjct: 1 FRDQEGKAVCVHDECPHRACPLSIGKVIDGNIACPYHGWEVNGEGVCVNMPQVTPQVEAG 60
Query: 215 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIH-----ELPYD 269
R CV+ +E G++W+W + P P P + P ++H ++P +
Sbjct: 61 RP-CVQKLPCEEVGGMIWIWTGEDGIPIP---PVESDRLLPPTNKGFSLHAEIAMDVPVE 116
Query: 270 HSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF 329
H +L+ENL+D AH P +H T ++ + F+ R AG W P
Sbjct: 117 HGLLIENLLDLAHAPFTHTST-FAKGWSVPDLVNFQTA--AARALAGNW-----EPYPID 168
Query: 330 LRFEAPCVLQN--------NRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTS 381
+ FE PC+ + ES ++ K++ + +C P G + L+ R
Sbjct: 169 MSFEPPCMTLSTIGLAQPGKLESGVRQSQCKNHLHQMHVCLPAGPKSTRLLYRMHLDFLG 228
Query: 382 PWIKLFPD----WYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAE 437
W K P W + A +V +D+ + Q + L + +++ + D
Sbjct: 229 -WAKNVPGIQKLWEY--MAGQVLGEDLRLVLGQQDRLER----GGDVWGHPVPYDKLGVR 281
Query: 438 YRKW 441
YR+W
Sbjct: 282 YRRW 285
>gi|428779892|ref|YP_007171678.1| ring-hydroxylating dioxygenase, large terminal subunit
[Dactylococcopsis salina PCC 8305]
gi|428694171|gb|AFZ50321.1| ring-hydroxylating dioxygenase, large terminal subunit
[Dactylococcopsis salina PCC 8305]
Length = 340
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 102/181 (56%), Gaps = 7/181 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V P +T++ + IVLY+ G++ +DRCPHR KLS G++ LE
Sbjct: 14 WYVVARSCEVTTQ-PHAVTLWKESIVLYRQNDGKICALEDRCPHRFVKLSAGEVQGNYLE 72
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 246
C YHGWQF+ +GKC+ IP L K+PR +R Y V+E+ G +WV++ ++ P ++
Sbjct: 73 CAYHGWQFDDQGKCISIPYLTEKQKLPRCQ-LRRYPVQEADGFIWVFLGEENQNIPRFQI 131
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS-AKREDAQPLGFE 305
P +++ + ++ E +S L+ENLMD H + D ++ AK E+ + E
Sbjct: 132 PEWDHL---NYIATVSVIETQAHYSYLIENLMDMYHGHLHQDWQAWTDAKLENIKETDQE 188
Query: 306 V 306
V
Sbjct: 189 V 189
>gi|264679811|ref|YP_003279720.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
gi|262210326|gb|ACY34424.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
Length = 324
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 97/165 (58%), Gaps = 13/165 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ + +V AP + + +Q +VL+++ +G ++ DRCPHR A+LS G++ +G LE
Sbjct: 7 WHPVAQSSEVVS-APFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVENGHLE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF G+CVK+P +P D P S VR +EV+E+ G++WV + + +LP
Sbjct: 66 CPYHGWQFSSGGQCVKVPAVP-DFTPPASQRVRAFEVQEAYGLIWV----RLESSDSQLP 120
Query: 248 WFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 288
FA + + ++ PYD + ++EN +D +H H+
Sbjct: 121 ---VFAAETDEHLRKVNCGPYDVAASAPRIIENFLDMSHFGFVHE 162
>gi|329939798|ref|ZP_08289099.1| oxidase [Streptomyces griseoaurantiacus M045]
gi|329301368|gb|EGG45263.1| oxidase [Streptomyces griseoaurantiacus M045]
Length = 398
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WYP+ T ++ + P G+ +++VL++D G L C RCPH+ A + +G+L +
Sbjct: 5 QWYPILQTSEIQREKPTGVRRMGEELVLWRDLDGTLVCQTARCPHKGANIGDGRLKGNTV 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
EC YHG++F+ EG C +P L A A++P S +RTY V+E G+VW+W ++ + L
Sbjct: 65 ECPYHGFRFDAEGTCKVVPALGAGARVPASLKLRTYPVREQHGLVWLWWGEER----EHL 120
Query: 247 PWFE------NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
P E +RP ++ +S L Y I E+L++ H+ H
Sbjct: 121 PAIELPAELVGNSRP-YETISWTRPLHYTRYI--ESLLEFYHVTFVH 164
>gi|428209012|ref|YP_007093365.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428010933|gb|AFY89496.1| Rieske (2Fe-2S) iron-sulfur domain protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 351
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 90/158 (56%), Gaps = 8/158 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +++V + P+ +T++ Q I +Y+ G++ +DRCPHR KLS G+++D LE
Sbjct: 23 WYAVARSREVTTN-PIAVTLWHQAIAIYRGNDGKVYALEDRCPHRQVKLSHGRVVDNNLE 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK---TPPNPD 244
C YHGW+ G G+CV +P L + K+P +R Y ++E G VW++ + T P
Sbjct: 82 CAYHGWRIAGNGECVDVPYLATNQKLPNCK-IRHYPIREQDGFVWLFPGDRNLATQLQPL 140
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
LP +++ + +I E +S L+ENLMD H
Sbjct: 141 GLPEWDHL---NYIATVSIIECAAHYSYLIENLMDMYH 175
>gi|302829817|ref|XP_002946475.1| hypothetical protein VOLCADRAFT_103059 [Volvox carteri f.
nagariensis]
gi|300268221|gb|EFJ52402.1| hypothetical protein VOLCADRAFT_103059 [Volvox carteri f.
nagariensis]
Length = 441
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 180/430 (41%), Gaps = 84/430 (19%)
Query: 154 LYKDGKGELRC-HQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADA 211
+Y +G RC Q LA LSEG++ DG L+C YHGWQF+G G C IPQL DA
Sbjct: 1 MYMKMRGVRRCPVQPAVTLGLAPLSEGRIESDGTLQCSYHGWQFDGRGACTHIPQLRGDA 60
Query: 212 KI------PRSACVRTYEVKESQGVVWVW--MSQKT------PPNPDKLPWFENFARP-- 255
K R +CVR + V+ G++WV SQ+ P P + E P
Sbjct: 61 KAMQVACESRRSCVRAFPVQVVHGLLWVRPDSSQQAHEEFAKNPAPPQTAIKELLGEPEV 120
Query: 256 -GFQDVST--IHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDR 312
GF+ + + ++P L EN++DP+H+P +H + + E V E +
Sbjct: 121 EGFRQTTQWYMRDVPMRFDTLCENILDPSHVPFTHHKVQGNRNNEKGTTTKL-VDEISLE 179
Query: 313 GFAGQWGREKDG--------SMPNFLRFEAPCVLQNNRESVDNKTG-EKHYSTGLFLCRP 363
GFA + + PNF+R+ P + N +V + G + Y T + +CRP
Sbjct: 180 GFAFELDFQNPRFGVSVPAFKAPNFVRYGNP-IRSLNVFAVPTRPGWSRIYVTFMKVCRP 238
Query: 364 TGQGKSMLIVRFGTT----GTSPWI--KLFP-----DWYFHQSASK-VFEQDMGFLSSQN 411
G+++ + G G PW+ KL+ W H + V + D L Q
Sbjct: 239 ---GRAITVGTQGEDTRQPGRLPWLVEKLYSMVEKITWLEHITQRHPVLDGDNYILHLQE 295
Query: 412 EVLLKEKVPT-KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHA 470
L +E ++ +F + D R W + G +P P P
Sbjct: 296 RALHEEHNSDWQKNFFMPAAADASTIAIRTWFNTFGGAVP-------TCEPGTP------ 342
Query: 471 PAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAAL 530
V+ L + + +RY +H +HC+ C+ A++ ++ A A+
Sbjct: 343 -------VAPRLTKREAL---------DRYSQHTVHCRHCQKALR-------NVDLATAV 379
Query: 531 LTALAILGAG 540
+TA IL AG
Sbjct: 380 VTAAGILVAG 389
>gi|407713671|ref|YP_006834236.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235855|gb|AFT86054.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 357
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V D PL T+ D++IVL++D DRCPHR A LS G+L G +
Sbjct: 8 WYVAAWDSEVLSDKPLARTLLDEKIVLFRDANNTAVALADRCPHRFAPLSMGELCQGNVR 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG QF +GKCV P + IP +A VR Y V E V+W+WM K+ + +P
Sbjct: 68 CSYHGLQFGSDGKCVHNPH--GNGIIPATAVVRAYPVVERYSVIWIWMGDKSKADDALIP 125
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+ ++ + +N+MD +HI H T
Sbjct: 126 EYRGLDPETAYVAKDYLYAKANYVLETDNIMDLSHIEFLHPET 168
>gi|238767604|dbj|BAH66641.1| chlorophyllide a oxygenase [Pyramimonas parkeae]
Length = 264
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 124/268 (46%), Gaps = 32/268 (11%)
Query: 157 DGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS 216
D G C +D C HR LS GQ++DG++EC YHGW + G+C K+P + +
Sbjct: 1 DADGIAACVKDECAHRACPLSLGQVVDGQVECPYHGWAYNRGGECTKMP----STRYCKG 56
Query: 217 ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD-VSTIHELPYDHSILLE 275
V++ V+E G++WVW P ++P F A GF + ++P +H +L+E
Sbjct: 57 VGVKSLTVQEQDGLIWVWPGGAEPTT--EVPRFH--APEGFTTHAELMLDVPVEHGLLIE 112
Query: 276 NLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAP 335
NL+D AH P +H T AK L V + + G W P + FEAP
Sbjct: 113 NLLDLAHAPFTHTST--FAKGWSIPEL---VNIKMNGALVGNW-----DPYPIDMSFEAP 162
Query: 336 CVLQNN---------RESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKL 386
C+ + + + + KH + +C P+ +G + L+ R PW++
Sbjct: 163 CITLSTIGLARPGQVEKGLRAEDCPKHLYQ-MHVCLPSKKGHTRLLYRMALD-FMPWVQY 220
Query: 387 FP--DWYFHQSASKVFEQDMGFLSSQNE 412
P + + Q A++V +D+ + Q E
Sbjct: 221 VPFINSVWQQMANQVLGEDLRLVLGQQE 248
>gi|307725646|ref|YP_003908859.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307586171|gb|ADN59568.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 356
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ +V APLG T+ D+ +VLY+ GE DRCPHR A LS G+++DG LE
Sbjct: 8 WYVAALSSEVTAHAPLGRTLLDEPVVLYRTAGGEAVALADRCPHRFAPLSSGRIVDGTLE 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F G CV P D ++P A R Y V E G VW W LP
Sbjct: 68 CPYHGLRFGAHGHCVFNPH--GDGRVPARAQARRYPVHERYGAVWFWPGDPQRALGTPLP 125
Query: 248 WFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
F+ R F +H ++ + +NL+D +H H T
Sbjct: 126 AFDYLDPRDHFTSERYLHTRA-NYQLSADNLLDLSHFQYLHPDT 168
>gi|126659883|ref|ZP_01731008.1| hypothetical protein CY0110_08486 [Cyanothece sp. CCY0110]
gi|126618846|gb|EAZ89590.1| hypothetical protein CY0110_08486 [Cyanothece sp. CCY0110]
Length = 460
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 153/354 (43%), Gaps = 34/354 (9%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ W++ WYP+ + P +TV +++V++++ K + D+CPH+LA+LS G++
Sbjct: 5 FSWSQNWYPISPLSYLDASVPTPVTVLGKKLVIWQNKKQQWVVMDDQCPHKLAQLSLGRI 64
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVVWVW 234
DG L C +HGW F EG C KIP L +A+ ++AC V Y + QG++WVW
Sbjct: 65 EDDGTLMCRHHGWCFNAEGNCTKIPMLEEEAR--KTACNSSRSQVTVYPTQVKQGLLWVW 122
Query: 235 MSQKTPPNPD-KLPWFENFARPGFQDVST---IHELPYDHSILLENLMDPAHIPISHDRT 290
KT D +L G +T + E+P + + +E+ DP+H H+
Sbjct: 123 PDDKTTAFEDCQLKEPAIIPECGLDVTATDWHLLEVPVGYIVSVESSFDPSHAQFLHEGL 182
Query: 291 DYSAKREDAQPLGFEVTER--TDRGF----AGQWGREKDGSMPNFLRFEAPCVLQNNRES 344
A + F+ + GF +G KD M +F PC N
Sbjct: 183 AGFAPEKAIPITSFKTVGEISAESGFTLKHSGYNIFNKD--MEATRQFNPPCC---NTTI 237
Query: 345 VDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPD--------WYFHQSA 396
G + F+ PT G+ I +F T+ D + H S
Sbjct: 238 YRYPNGNMMLAQLYFI--PTEPGRCRYISKFITSMNFSQNNFILDRLPQKLKTGFQHLST 295
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMP 450
++ +QD+ + +Q + + P + YF D + +R+W+D+ G P
Sbjct: 296 YQLSDQDLMVMHAQETLQASLEKPWHKSYFLPAKADIGIITFRQWLDQFAGGKP 349
>gi|325293910|ref|YP_004279774.1| vanillate O-demethylase oxygenase [Agrobacterium sp. H13-3]
gi|325061763|gb|ADY65454.1| vanillate O-demethylase oxygenase subunit [Agrobacterium sp. H13-3]
Length = 346
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 107/202 (52%), Gaps = 9/202 (4%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
+T+ + IVLY+ G+L +D CPHR LS G++ +EC YHG F+ G C ++
Sbjct: 23 VTMLGENIVLYRLQNGKLAALEDACPHRKLPLSMGRIKGDDVECGYHGLTFDCSGACTRV 82
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 263
P +IP ACVR+Y V+E G+VWVWM + +P ++ E+F P + +
Sbjct: 83 ---PGAERIPHVACVRSYPVEERYGLVWVWMGEAAKADPAEIFHVEHFGDPSWGVNRGES 139
Query: 264 HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKD 323
+ ++ + +NL+DP+H+ H ++ +++ + PL E T ++D +W + D
Sbjct: 140 MTINCNYLYMTDNLLDPSHVAWVH-QSSFASSACEETPL--ETTVKSDGVVVWRWMLDSD 196
Query: 324 GS--MPNFLRFEAPCVLQNNRE 343
+ FL+FE C + + E
Sbjct: 197 PAPFYAPFLQFEGKCDRKQHYE 218
>gi|55584974|gb|AAV53699.1| DdmC [Stenotrophomonas maltophilia]
Length = 339
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 11/182 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L +++ + PLG T+ D + LY+ G + D CPHR A LS+G L++G L+
Sbjct: 8 WYVAALPEEL-SEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGILVNGHLQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G G+CV P + P S VR++ V E ++W+W +P +P
Sbjct: 67 CPYHGLEFDGGGQCVHNPH--GNGARPASLNVRSFPVVERDALIWIWPGDPALADPGAIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
F P ++ V + ++ +L++NLMD H H R +AQ F+
Sbjct: 125 DFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVH--------RANAQTDAFDRL 176
Query: 308 ER 309
ER
Sbjct: 177 ER 178
>gi|393778388|ref|ZP_10366662.1| Rieske (2Fe-2S) protein [Ralstonia sp. PBA]
gi|392714659|gb|EIZ02259.1| Rieske (2Fe-2S) protein [Ralstonia sp. PBA]
Length = 360
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYPL +D+ + + V ++ IV+Y+ G++ QD CPHRLA LS G+L +E
Sbjct: 8 WYPLGWAEDIGRELSRHM-VLEEAIVVYRREDGKIAALQDACPHRLAPLSLGKLKGDTIE 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ GKCV+I P IP +A VR Y ++E G+ W+WM +P KL
Sbjct: 67 CGYHGMTFDCSGKCVRI---PGQEIIPGNAVVRAYPIEEKYGLAWIWMGDPALADPAKLF 123
Query: 248 WFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRT 290
+ P ++ V + ++ L +NL+DPAH+ H T
Sbjct: 124 HIAQYDDPNWRAVKGGTLRIDCNYLSLCDNLLDPAHVTFVHPST 167
>gi|418407591|ref|ZP_12980909.1| vanillate O-demethylase oxygenase subunit [Agrobacterium
tumefaciens 5A]
gi|358006735|gb|EHJ99059.1| vanillate O-demethylase oxygenase subunit [Agrobacterium
tumefaciens 5A]
Length = 346
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 107/202 (52%), Gaps = 9/202 (4%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
+T+ + IVLY+ G+L +D CPHR LS G++ +EC YHG F+ G C ++
Sbjct: 23 VTMLGENIVLYRLQNGKLAALEDACPHRKLPLSMGRIKGDDVECGYHGLTFDCSGACTRV 82
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 263
P +IP ACVR+Y V+E G+VWVWM + +P ++ E+F P + +
Sbjct: 83 ---PGAERIPHVACVRSYPVEERYGLVWVWMGEAAKADPAEIFRVEHFGDPSWGVNRGES 139
Query: 264 HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKD 323
+ ++ + +NL+DP+H+ H ++ +++ + PL E T ++D +W + D
Sbjct: 140 MTINCNYLYMTDNLLDPSHVAWVH-QSSFASSACEETPL--ETTVKSDGVVVWRWMLDSD 196
Query: 324 GS--MPNFLRFEAPCVLQNNRE 343
+ FL+FE C + + E
Sbjct: 197 PAPFYAPFLQFEGKCDRKQHYE 218
>gi|254574850|pdb|3GKE|A Chain A, Crystal Structure Of Dicamba Monooxygenase
gi|254574851|pdb|3GKE|B Chain B, Crystal Structure Of Dicamba Monooxygenase
gi|254574852|pdb|3GKE|C Chain C, Crystal Structure Of Dicamba Monooxygenase
gi|254839314|pdb|3GB4|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839315|pdb|3GB4|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839316|pdb|3GB4|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839346|pdb|3GOB|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839347|pdb|3GOB|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839348|pdb|3GOB|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839356|pdb|3GTE|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839357|pdb|3GTE|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839358|pdb|3GTE|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839359|pdb|3GTS|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|254839360|pdb|3GTS|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|254839361|pdb|3GTS|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|255311844|pdb|3GL0|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311845|pdb|3GL0|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311846|pdb|3GL0|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311847|pdb|3GL2|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
gi|255311848|pdb|3GL2|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
gi|255311849|pdb|3GL2|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
Length = 349
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 11/182 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L +++ + PLG T+ D + LY+ G + D CPHR A LS+G L++G L+
Sbjct: 9 WYVAALPEEL-SEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGILVNGHLQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G G+CV P + P S VR++ V E ++W+W +P +P
Sbjct: 68 CPYHGLEFDGGGQCVHNPH--GNGARPASLNVRSFPVVERDALIWIWPGDPALADPGAIP 125
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
F P ++ V + ++ +L++NLMD H H R +AQ F+
Sbjct: 126 DFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVH--------RANAQTDAFDRL 177
Query: 308 ER 309
ER
Sbjct: 178 ER 179
>gi|86608774|ref|YP_477536.1| Rieske family iron-sulfur cluster-binding protein [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|86557316|gb|ABD02273.1| iron-sulfur cluster-binding protein, Rieske family [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 339
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +P + ++IVL+ D G+ + DRC HR A+LS+G + DG +
Sbjct: 13 WYPVMPLSRLEQGSPQPFELLGERIVLWLDKAGQPQAVADRCCHRSAQLSKGIVCDGHIR 72
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK-L 246
C YHGW+F+G G CVK+PQLP A+IP S + Y + G WV + P P + +
Sbjct: 73 CPYHGWEFDGTGACVKVPQLPDQARIPESYRIPAYLCQARYGYAWVCLH----PQPLRGI 128
Query: 247 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P P ++ + +E S+ + EN D AHI H T S ED P FE
Sbjct: 129 PVIPEAEDPSYRLIHEFYERWECASLRICENEFDAAHISFVHQNTFGSM--EDLVPSHFE 186
Query: 306 VTE 308
V E
Sbjct: 187 VEE 189
>gi|5478797|dbj|BAA82479.1| chlorophyll b synthase [Oryza sativa]
Length = 356
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 147/335 (43%), Gaps = 39/335 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C + C HR L G + +GR++
Sbjct: 35 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQ 94
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW++ +GKC K+P + +R+ E +G+VW+W P + P
Sbjct: 95 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSL 149
Query: 246 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 150 LP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVK 201
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYST 356
+T + G G W P + F PC++ + E K H
Sbjct: 202 FLTPSS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQ 254
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEVL 414
L +C P+ + K+ L+ R + +PWIK P + S A KV +D+ + Q E +
Sbjct: 255 -LHICLPSSRNKTRLLYRM-SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQERM 312
Query: 415 LKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGM 449
+ ++ S D YR W D G+
Sbjct: 313 IN----GANVWNWPVSYDKLGIRYRLWRDAIERGV 343
>gi|428772905|ref|YP_007164693.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cyanobacterium stanieri PCC 7202]
gi|428687184|gb|AFZ47044.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanobacterium stanieri
PCC 7202]
Length = 354
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 14/171 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V D P+ +T++ +IVL++D +G + +DRCPHR KLS G+++D +E
Sbjct: 20 WYVVARSVEVKDQ-PVSVTLWHNEIVLFRDSQGNINALEDRCPHRQVKLSPGKVVDDNIE 78
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW--MSQKTPPNPDK 245
C YHGWQF+ EG C +P L K+PR ++ Y V+E G +W++ +P
Sbjct: 79 CAYHGWQFDKEGNCSFVPYLDERQKLPRCK-IKRYPVQELDGFIWLFPGDGDSEAVSPMG 137
Query: 246 LPWFENFARPGFQDVSTIHEL--PYDHSILLENLMDPAHIPISHDRTDYSA 294
LP +E+ ++++ E+ P +S L+ENLMD H H +Y A
Sbjct: 138 LPEWEHLNY-----IASVAEVDCPGHYSYLIENLMDMHH---GHLHDNYQA 180
>gi|238767608|dbj|BAH66643.1| chlorophyllide a oxygenase [Prasinoderma coloniale]
Length = 304
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 140/332 (42%), Gaps = 56/332 (16%)
Query: 156 KDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPR 215
+D G C +D C HR LS G+ + G+++C YHGW+FE +G+C K P I
Sbjct: 1 RDANGVAGCVRDSCAHRACPLSLGKNVGGKVQCPYHGWEFETDGRCTKTPSTNELKNIR- 59
Query: 216 SACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE-----LPYDH 270
V V E G++WV+ ++ PP + F A PG D TIH +P +H
Sbjct: 60 ---VEALPVVERDGMIWVYPGEEDPPEDHQN--FTALAPPG--DEFTIHAEIVLTVPVEH 112
Query: 271 SILLENLMDPAHIPISH-----------DRTDY-SAKREDAQPLGFEVTERTDRGFAGQW 318
+L+ENL+D AH P +H DR D+ + K AQ +G G G+W
Sbjct: 113 GLLMENLLDLAHAPFTHTSTFAKGWSVPDRVDFKTVKNAVAQQIG---------GLGGEW 163
Query: 319 GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYST----------GLFLCRPTGQGK 368
P + F+ PC++ + V K G+ T L +C P G+
Sbjct: 164 -----QPYPIDMTFQPPCMVLSQIGLV--KPGQVEAETRASDCDRHLHQLHVCLPAKDGE 216
Query: 369 SMLIVRFGTTGTSPWIKL-FPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFN 427
+ L+ R L F ++ + A++V +D+ + Q + +++ N
Sbjct: 217 TRLLYRMSLDFAKFAKNLPFVSEFWEELANQVLGEDLVLVEGQQ----RNMKAGMDVWSN 272
Query: 428 LRSIDTWVAEYRKWMDKAGHGMPYYFGHSTIS 459
+ D YR+W +G P TI
Sbjct: 273 PVAYDKLGVRYRRWRTGVQYGNPSLRSELTIE 304
>gi|115483526|ref|NP_001065433.1| Os10g0567400 [Oryza sativa Japonica Group]
gi|75247969|sp|Q8S7E1.1|CAO_ORYSJ RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|18855011|gb|AAL79703.1|AC087599_22 putative chlorophyll synthase [Oryza sativa Japonica Group]
gi|110289596|gb|ABB48002.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113639965|dbj|BAF27270.1| Os10g0567400 [Oryza sativa Japonica Group]
gi|215694378|dbj|BAG89371.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185043|gb|EEC67470.1| hypothetical protein OsI_34701 [Oryza sativa Indica Group]
gi|222613297|gb|EEE51429.1| hypothetical protein OsJ_32509 [Oryza sativa Japonica Group]
Length = 541
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 147/335 (43%), Gaps = 39/335 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C + C HR L G + +GR++
Sbjct: 220 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQ 279
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW++ +GKC K+P + +R+ E +G+VW+W P + P
Sbjct: 280 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSL 334
Query: 246 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVK 386
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN--------RESVDNKTGEKHYST 356
+T + G G W P + F PC++ + E K H
Sbjct: 387 FLTPSS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQ 439
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEVL 414
L +C P+ + K+ L+ R + +PWIK P + S A KV +D+ + Q E +
Sbjct: 440 -LHICLPSSRNKTRLLYRM-SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQERM 497
Query: 415 LKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGM 449
+ ++ S D YR W D G+
Sbjct: 498 IN----GANVWNWPVSYDKLGIRYRLWRDAIERGV 528
>gi|88857937|ref|ZP_01132579.1| putative oxidase [Pseudoalteromonas tunicata D2]
gi|18643160|gb|AAL76235.1|AF441246_1 LppA [Pseudoalteromonas tunicata]
gi|88819554|gb|EAR29367.1| putative oxidase [Pseudoalteromonas tunicata D2]
Length = 370
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 4/163 (2%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + T+DV P+G+ ++ +VLY+D GEL C DRCPH+ KLS GQ +
Sbjct: 5 QWYAILRTQDV-KKKPVGIKRLEKLLVLYRDTAGELVCLDDRCPHKGVKLSLGQQHGDLI 63
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS--QKTPPNPD 244
C YHG+Q++ +G CV +P L +P+ CV++Y+VKE G++W W ++ PD
Sbjct: 64 ACPYHGFQYDQQGDCVHMPVLGQKGNVPKGMCVKSYKVKEELGLIWFWFGDVRQEHEYPD 123
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+P F+ + P +++ +E++ + HIP H
Sbjct: 124 -IPMFKQLKEYKGHYSYYGWDAPINYTRYVESVCEIYHIPFVH 165
>gi|81300844|ref|YP_401052.1| hypothetical protein Synpcc7942_2035 [Synechococcus elongatus PCC
7942]
gi|81169725|gb|ABB58065.1| hypothetical protein Synpcc7942_2035 [Synechococcus elongatus PCC
7942]
Length = 345
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 130/301 (43%), Gaps = 23/301 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ L + V D PL +T+ + I LY+D G++ DRC HR A LS G + + L
Sbjct: 7 WYPVALAQKV-GDRPLSVTLCGEAIALYRDSAGQIHALSDRCVHRGAALSGGWVENDCLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQ++ +G C KIP +IP +A V Y+ E G+VW++ + LP
Sbjct: 66 CPYHGWQYDAQGHCRKIPANTEQQRIPFAAKVPHYDAIERYGLVWLFYGDLPEADRPPLP 125
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE-- 305
+ P ++ V ++ + ENLMD AH P +H + +A +P E
Sbjct: 126 PLPEYDDPAWRTVQGEVTYTTHYTRVTENLMDFAHAPFTHSGSFGAASDPLIEPYKVEQL 185
Query: 306 ------VTERTDRGFAGQWGREKDGSMP----NFLRFEAPCVLQNNRESVDNKTGEKHYS 355
T+ T + G W G P + PC++ R D G +
Sbjct: 186 PDGLRAQTQFTKSAYRGIWKLFNRGDAPRTVTTTITLYMPCIV---RTETDLGNGFRFIG 242
Query: 356 TGLFLCRPTGQGKSM-LIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVL 414
G L K+ L VR TG + D + + K+ E+D + +Q +
Sbjct: 243 YGANLPIDAETTKTFWLTVRTFFTGA------WADGDTVRRSLKIIEEDKRIVETQRPKM 296
Query: 415 L 415
+
Sbjct: 297 I 297
>gi|167572126|ref|ZP_02365000.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
oklahomensis C6786]
Length = 330
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
++ W P+ L++ V + PLG+ +Q +VL++D G +R +DRC HR A LS G++
Sbjct: 9 FNSASRWMPVALSEQVSSETPLGVVCMEQPLVLFRDASGAVRAMEDRCAHRRAPLSLGRM 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
DGRL+C YHGW +EG G CV IP L A+ +P R Y+ E G VW
Sbjct: 69 TPDGRLQCAYHGWTYEGATGACVAIPNLSANEHVPSHFAARAYKTLERDGFVW 121
>gi|149920331|ref|ZP_01908801.1| oxidase-related protein [Plesiocystis pacifica SIR-1]
gi|149818773|gb|EDM78215.1| oxidase-related protein [Plesiocystis pacifica SIR-1]
Length = 354
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 26/296 (8%)
Query: 126 EEWYPLYLTKDV--PDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
E W+ + + +++ P+ L F +VL++D +G+LR DRCPHR A LS G + D
Sbjct: 5 EAWHVIAIRRELRRAHREPVALRRFGLDLVLWRDAEGKLRAVLDRCPHRSASLSAGAVKD 64
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ-KTPPN 242
G++EC +HG++++GEG CVK+P +A+ PR +E++E+ +VW+W Q + +
Sbjct: 65 GQIECPFHGFRWDGEGNCVKVPCNGPEAQRPRHLANTAFELREAHDMVWMWWGQPRAAGD 124
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSIL-----LENLMDPAHIPISHDRTDYSAKRE 297
+LPW FA D +H+ + + + +EN +D AH+P +H T +
Sbjct: 125 YPELPWSGPFA---AVDEGYVHDTLVETTQVGWMRNVENQLDWAHLPFAHHNTIGTGF-- 179
Query: 298 DAQPLGFEVTERTDRGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
P EV D W E D +P+ P + G +YS
Sbjct: 180 ---PPDIEVRAELDGDLLSCWPAHYEDDEGVPH-----TPLHYMFPNTWIMAVGGPNNYS 231
Query: 356 TGLFLCRPTGQGKSMLIVR-FGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
F P + + + +R + G P + F + +F+QD + +Q
Sbjct: 232 VIAFA--PVDETHTRMYLRTYVKRGRVPGLAALIARVFRPANRVIFKQDQRIIETQ 285
>gi|395003531|ref|ZP_10387666.1| ring-hydroxylating dioxygenase, large terminal subunit [Acidovorax
sp. CF316]
gi|394318544|gb|EJE54963.1| ring-hydroxylating dioxygenase, large terminal subunit [Acidovorax
sp. CF316]
Length = 325
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 13/168 (7%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
T W+P+ L V APL + + +VL++DG G+++ DRCPHR A+LS G++ G
Sbjct: 4 TTLWHPVALAHAV-QQAPLAVQLLQHALVLWRDGAGQVQAFTDRCPHRGARLSLGRVHGG 62
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
R+EC YHGWQF G+C +P LP P + C + V E+ G++WV +
Sbjct: 63 RIECPYHGWQFAASGQCEHVPALP-QFTPPATHCALRHGVVEAYGLIWV----RIVAGDA 117
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 288
LP FE G + + + PYD + ++EN +D AH HD
Sbjct: 118 ALPAFEA---EGDERLRKLDCGPYDVATSAPRIVENFLDMAHFGFVHD 162
>gi|110289597|gb|ABB48003.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
Length = 526
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 147/335 (43%), Gaps = 39/335 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C + C HR L G + +GR++
Sbjct: 205 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQ 264
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW++ +GKC K+P + +R+ E +G+VW+W P + P
Sbjct: 265 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSL 319
Query: 246 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 320 LP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVK 371
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN--------RESVDNKTGEKHYST 356
+T + G G W P + F PC++ + E K H
Sbjct: 372 FLTPSS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQ 424
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEVL 414
L +C P+ + K+ L+ R + +PWIK P + S A KV +D+ + Q E +
Sbjct: 425 -LHICLPSSRNKTRLLYRM-SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQERM 482
Query: 415 LKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGM 449
+ ++ S D YR W D G+
Sbjct: 483 IN----GANVWNWPVSYDKLGIRYRLWRDAIERGV 513
>gi|300864498|ref|ZP_07109363.1| Rieske (2Fe-2S) region [Oscillatoria sp. PCC 6506]
gi|300337508|emb|CBN54511.1| Rieske (2Fe-2S) region [Oscillatoria sp. PCC 6506]
Length = 350
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V P+ + +++Q IV+Y+D E+R +DRCPHR KLS GQ+ LE
Sbjct: 23 WYVVARSNEVKTQ-PIAVILWNQPIVIYRDNTEEIRALEDRCPHRQVKLSHGQVKGDLLE 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F G+C ++ L + K+P S +R++ VKE G +W++ +T L
Sbjct: 82 CAYHGWRFNASGECAEVDYLADNQKLP-SCKIRSFPVKEQDGFIWLFPGDETKAEQVSLL 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
+ + ++ +S L+ENLMD H H D+ A A+P+ ++
Sbjct: 141 GLPEWEHINYIATVSVINCQAHYSFLIENLMDMYH---GHLHQDWQAW---AEPVLQDLD 194
Query: 308 ERTDR 312
E DR
Sbjct: 195 EDADR 199
>gi|342209969|gb|AEL16995.1| McpG [Streptomyces longispororuber]
Length = 347
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WYP+ T D+ DAP G+ +++VL++D G L C RCPH+ A L++G+L+ +
Sbjct: 5 QWYPILRTDDIKRDAPTGVRRMGEELVLWRDLDGNLVCQSARCPHKGANLADGRLVGNSV 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-K 245
C YHG++F +G C +P L ++ ++P S V TYEV+E +VW+W K P+ +
Sbjct: 65 ACPYHGFRFGTDGACRLVPALGSEGRVPASLRVDTYEVREKYDLVWLWWGDKRANLPEIE 124
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
LP E P + T P ++ +E+L++ H+ H
Sbjct: 125 LP-HELAEHPRPYETITFSR-PVHYTRYIESLLEFYHVTFVH 164
>gi|418472321|ref|ZP_13042068.1| oxidase, partial [Streptomyces coelicoflavus ZG0656]
gi|371547060|gb|EHN75473.1| oxidase, partial [Streptomyces coelicoflavus ZG0656]
Length = 384
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 71/114 (62%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WYP+ T++V +D PLG+ Q +VL++D G L C RCPH+ A L +G++ +
Sbjct: 5 QWYPIVETQEVRNDKPLGVRRMGQDLVLWRDIDGNLVCQGARCPHKGANLGDGRMKGNTI 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 240
EC YHG+++ +G C IP + A A+IP S V TY V+E G+VW+W + P
Sbjct: 65 ECPYHGFRYGADGACRVIPAMGAQARIPGSLRVATYPVREQFGLVWMWWGDERP 118
>gi|423696631|ref|ZP_17671121.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
gi|388003531|gb|EIK64858.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 357
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++ LG T+ +Q IV +++ +G ++ DRCPHR A L G+++ ++
Sbjct: 8 WYIAGWADELAQGGMLGRTIVEQPIVFFRNSQGAIQALADRCPHRFAPLHMGKIVGDSVQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G G+C P D IP++ACVR + V E G +WVW N +P
Sbjct: 68 CPYHGLRFDGSGQCTHNPH--GDGSIPKAACVRAFAVAERHGAIWVWPGDPNLANDALIP 125
Query: 248 WFENFARPGFQDVSTIHELP--YDHSILLENLMDPAHIPISHDRT 290
F F + D LP + +L +N+MD +H+ H T
Sbjct: 126 DFSFFEQ-APTDAKGHGYLPTRAHYELLADNIMDLSHVDFLHPDT 169
>gi|325517532|gb|ADZ25004.1| Rieske (2Fe-2S) domain-containing protein [Sorangium cellulosum]
Length = 337
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
EWY + + V D P+GL Q IVL++ G + C DRCPHR AKLS G++ G +
Sbjct: 5 EWYAVLESHRVRRD-PVGLKRLGQDIVLWRQSSGNVACLIDRCPHRGAKLSVGRVAQGCI 63
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
EC YHG+ F+ G C +P AD +P+ V ++ V+E G++WVW + P +
Sbjct: 64 ECPYHGFLFDAGGACRYVPANGADRPVPKGLHVDSWPVREEHGLIWVWWGESRSEYP-PV 122
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
PWF A + + ++ +EN +D H P H
Sbjct: 123 PWFPQPASDEAHAAESSGVYNFHYARAIENALDAHHFPFIH 163
>gi|428770647|ref|YP_007162437.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cyanobacterium aponinum PCC 10605]
gi|428684926|gb|AFZ54393.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanobacterium aponinum
PCC 10605]
Length = 350
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 10/192 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V D P +T++ + IV++++ +G+++ +DRCPHR KLS+G ++ +E
Sbjct: 20 WYVVARSVEVTD-KPYCVTLWHENIVIFRNAQGKIKALEDRCPHRQVKLSDGVVVGDDIE 78
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM--SQKTPPNPDK 245
C YHGW+F GEGKC +P L + ++P S ++ Y V+E G +W+++ P
Sbjct: 79 CAYHGWRFNGEGKCSFVPYLQENQRLP-SCKLKAYPVQELDGFIWLFLGDGDSEKIKPMG 137
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
LP +E+ V+TI+ P S L+ENLMD H H +Y A E
Sbjct: 138 LPEWEHLNY--IASVTTIN-CPGHFSYLIENLMDMYH---GHLHDNYQAWAEANLKEIET 191
Query: 306 VTERTDRGFAGQ 317
++R D + Q
Sbjct: 192 TSQRIDVLYTAQ 203
>gi|330808946|ref|YP_004353408.1| vanillate monooxygenase subunit [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377054|gb|AEA68404.1| putative vanillate monooxygenase, subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 357
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++ LG T+ +Q IV +++ +G ++ DRCPHR A L G+++ ++
Sbjct: 8 WYIAGWADELAQGGMLGRTIVEQPIVFFRNSQGAIQALADRCPHRFAPLHMGKIVGDSVQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G G+C P D IP++ACVR + V E G +WVW N +P
Sbjct: 68 CPYHGLRFDGSGQCTHNPH--GDGSIPKAACVRAFAVAERHGAIWVWPGDPNLANDALIP 125
Query: 248 WFENFARPGFQDVSTIHELP--YDHSILLENLMDPAHIPISHDRT 290
F F + D LP + +L +N+MD +H+ H T
Sbjct: 126 DFSFFEQ-APTDAKGHGYLPTRAHYELLADNIMDLSHVDFLHPDT 169
>gi|226490898|ref|NP_001151343.1| LOC100284976 [Zea mays]
gi|195645962|gb|ACG42449.1| chlorophyllide a oxygenase [Zea mays]
gi|223948119|gb|ACN28143.1| unknown [Zea mays]
gi|413951238|gb|AFW83887.1| chlorophyllide a oxygenase [Zea mays]
Length = 542
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 146/335 (43%), Gaps = 41/335 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C Q+ C HR L G + +GR++
Sbjct: 221 WYPVAFSSDLKDDTMVPIACFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 280
Query: 188 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ +GKC K+P + +I C E +G+VW+W P P
Sbjct: 281 CPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCF------EQEGMVWIWPGDDPPKATIPS 334
Query: 245 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LLP------PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLV 386
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN--------RESVDNKTGEKHYS 355
+T + G G W P + F PC++ + E + H
Sbjct: 387 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLH 439
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEV 413
L +C P+ + K+ L+ R + +PW+K P + S A KV +D+ + Q E
Sbjct: 440 Q-LHVCLPSSRNKTRLLYRM-SLDFAPWLKHVPLMHLLWSHFAEKVLNEDLRLVLGQQER 497
Query: 414 LLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
++ ++ S D YR W D G
Sbjct: 498 MIN----GANVWNWPVSYDKLGVRYRLWRDTVERG 528
>gi|397615617|gb|EJK63540.1| hypothetical protein THAOC_15793 [Thalassiosira oceanica]
Length = 883
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 17/242 (7%)
Query: 109 SEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDR 168
S EE ++ + + WY + V + ++ + +VLY+D G L C +D
Sbjct: 377 SVEEGIQSQKFDSASFNDHWYAVAYPWQVKEGEVFATRLWGEPLVLYRDSDGNLVCSKDV 436
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKI-----PRSACVRTY 222
CPHR A LS G++ D G+LEC+YHGW F +G IP D P+ +C++TY
Sbjct: 437 CPHRSAPLSMGKINDEGQLECMYHGWGFGKDGNIESIPTQIRDGGSSKRSPPKRSCLKTY 496
Query: 223 EVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
V+E +G++W+W + + KLP + + + T+ + D ++EN +D H
Sbjct: 497 CVEEHEGLIWIWRGELLEADASKLPKTRDVST---YPIDTVLDYNVDWQYIVENNLDSPH 553
Query: 283 IPISHDRT-----DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV 337
+ H+ + + RE + + R D G G +G+ G P +RF++P +
Sbjct: 554 LFWLHNGSVPPVRSLNFVREKVNQVKLQYF-RDDSGH-GHYGQTA-GGKPKIVRFDSPNI 610
Query: 338 LQ 339
++
Sbjct: 611 VR 612
>gi|397588210|gb|EJK54188.1| hypothetical protein THAOC_26247 [Thalassiosira oceanica]
Length = 855
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 17/242 (7%)
Query: 109 SEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDR 168
S EE ++ + + WY + V + ++ + +VLY+D G L C +D
Sbjct: 377 SVEEGIQSQKFDSASFNDHWYAVAYPWQVKEGEVFATRLWGEPLVLYRDSDGNLVCSKDV 436
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKI-----PRSACVRTY 222
CPHR A LS G++ D G+LEC+YHGW F +G IP D P+ +C++TY
Sbjct: 437 CPHRSAPLSMGKINDEGQLECMYHGWGFGKDGNIESIPTQIRDGGSSKRSPPKRSCLKTY 496
Query: 223 EVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
V+E +G++W+W + + KLP + + + T+ + D ++EN +D H
Sbjct: 497 CVEEHEGLIWIWRGELLEADASKLPKTRDVST---YPIDTVLDYNVDWQYIVENNLDSPH 553
Query: 283 IPISHDRT-----DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV 337
+ H+ + + RE + + R D G G +G+ G P +RF++P +
Sbjct: 554 LFWLHNGSVPPVRSLNFVREKVNQVKLQYF-RDDSGH-GHYGQTA-GGKPKIVRFDSPNI 610
Query: 338 LQ 339
++
Sbjct: 611 VR 612
>gi|405373825|ref|ZP_11028484.1| iron-sulfur cluster-binding protein, Rieske family [Chondromyces
apiculatus DSM 436]
gi|397087339|gb|EJJ18389.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 332
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 5/211 (2%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
W WY + + +PLGL +++VL++D G CPHR A L G++ +
Sbjct: 13 WATHWYAVAQASALGRSSPLGLQRLGRRLVLWRDADGVAHGADAACPHRGADLGLGRVRE 72
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
G LEC YHG++++G G C +P +AK ++ +R + V+E+ G +W W+ T
Sbjct: 73 GMLECPYHGFRYDGGGACRAMPCEGREAKPSKALSLRKHPVREAHGFIWAWLGGVTREPL 132
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR-TDYSAKREDAQPL 302
+LPW + PG S + ++E ++D H P +H R R D P
Sbjct: 133 PELPWLPSAPEPGPNSASVDDVWSARFTRVMEGMLDLHHFPFAHRRYVPPGYTRLD--PY 190
Query: 303 GFEVTERTDRGFAGQWGREKDGSMPNFLRFE 333
+V + R W R++DG LRF+
Sbjct: 191 EVQVESGSIRSVG--WLRKEDGPPGTGLRFD 219
>gi|339444691|ref|YP_004710695.1| ferredoxin subunit of nitrite reductase [Eggerthella sp. YY7918]
gi|338904443|dbj|BAK44294.1| ferredoxin subunit of nitrite reductase [Eggerthella sp. YY7918]
Length = 323
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 16/226 (7%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + + +V P+G+ F +++VL++D GE+ C C HR A L+ G++ +G +
Sbjct: 5 QWYAILSSSEVKKGTPVGVVRFGRRLVLWRDENGEVACLDGTCCHRGADLATGRVCEGHV 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C +HG ++ +G V IP DA++P + VR++ ++ G +WV+ K PD L
Sbjct: 65 CCPFHGLRYAADGHVVTIPANGRDAEVPENFLVRSWLAVDAFGFIWVFYG-KPEDAPDDL 123
Query: 247 PWFENFARPG--FQDVSTIHELPYDHSILLENLMDPAHIPISHDRT---------DYSAK 295
P F F R G F + S + + Y +I EN +D H+P H T +
Sbjct: 124 PMFAEF-RSGFPFAERSEVWNVHYSRAI--ENQLDVIHLPFVHPNTIGRGHKTLVNGPVT 180
Query: 296 REDAQPLGFEVTERTDRGFAGQWGRE-KDGSMPNFLRFEAPCVLQN 340
+ DA L F V DRG Q E ++ N L++ P + QN
Sbjct: 181 KWDADTLTFYVKNEPDRGQKPQTAEEIENWEQLNSLQYRVPNLWQN 226
>gi|238767606|dbj|BAH66642.1| chlorophyllide a oxygenase [Pyramimonas parkeae]
Length = 338
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 31/295 (10%)
Query: 130 PLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECL 189
P+ + + ++ + L +F + VL++D +G+ C QD+C HR LS G + +G + C
Sbjct: 1 PIEFSAQLVENTLIPLELFGEPWVLFRDAEGKAACLQDQCAHRACPLSLGSVQNGNVTCA 60
Query: 190 YHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWF 249
YHGWQF G+G C ++P P ++ V+ +V E G+++ W + P+ +P
Sbjct: 61 YHGWQFNGQGDCEEMPSTPH----CKNVGVKALQVTEKDGMIFAWTGEDDEPD---IPIP 113
Query: 250 ENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTE 308
E GF S I E+P +H +L+ENL+D AH P +H T ++ + + F + +
Sbjct: 114 ELAPPAGFVIHSEITMEVPVEHGLLVENLLDLAHAPFTHTAT-FARGWPIPEAVRFHLLD 172
Query: 309 RTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN---------RESVDNKTGEKHYSTGLF 359
+ +G W P + F P + ++ V +KH L
Sbjct: 173 K----LSGNW-----DPYPIDMAFLPPVMTESKIGLNQPGKIERGVRCDECDKHLHQ-LH 222
Query: 360 LCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNE 412
+C P +G + L+ R W++ P + + A++V +D+ + Q +
Sbjct: 223 VCLPAKEGHTRLLYRMSLDFMG-WVRFIPGIQRVWKEVANQVLGEDLRLVLGQQD 276
>gi|254297531|ref|ZP_04964984.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|386861637|ref|YP_006274586.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1026b]
gi|418539490|ref|ZP_13105086.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1026a]
gi|157807918|gb|EDO85088.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|385346114|gb|EIF52807.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1026a]
gi|385658765|gb|AFI66188.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1026b]
Length = 332
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 122/279 (43%), Gaps = 19/279 (6%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V D APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSDKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 240
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW ++
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWARAARGVD 129
Query: 241 P-NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI--PISHDR-TDYSAKR 296
P F +T+ L YD + L D H+ I+ R TDY
Sbjct: 130 TREPAAAAARATRCAQRFAGCATV-SLAYDDYV--AALADGPHLLMRIAGLRITDYVIA- 185
Query: 297 EDAQPLGFEVTERTDRGFAGQWGREKDGS-MPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
D +P G + +A + + G+ P LR AP +D + G
Sbjct: 186 -DPEPRGGRLAMERGVTWAARRHDHRFGAHYPWTLRLTAPQDGAPASVEIDTRDGAPMLW 244
Query: 356 TGLFLCRPTGQGKSMLIVRFG----TTGTSPWIKLFPDW 390
+ + P +G + L+ R G T G P LF W
Sbjct: 245 ASVAIA-PAARGATNLLWRGGVAADTGGAGP--ALFRLW 280
>gi|217421515|ref|ZP_03453019.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
gi|217395257|gb|EEC35275.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
Length = 332
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 122/279 (43%), Gaps = 19/279 (6%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V D APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSDKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 240
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW ++
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWARAARGVD 129
Query: 241 P-NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI--PISHDR-TDYSAKR 296
P F +T+ L YD + L D H+ I+ R TDY
Sbjct: 130 TREPAAAAARATRCAQRFAGCATV-SLAYDDYV--AALADGPHLLMRIAGLRITDYVIA- 185
Query: 297 EDAQPLGFEVTERTDRGFAGQWGREKDGS-MPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
D +P G + +A + + G+ P LR AP +D + G
Sbjct: 186 -DPEPRGGRLAMERGVTWAARRHDHRFGAHYPWTLRLTAPQDGAPASVEIDTRDGAPMLW 244
Query: 356 TGLFLCRPTGQGKSMLIVRFG----TTGTSPWIKLFPDW 390
+ + P +G + L+ R G T G P LF W
Sbjct: 245 ASVAIA-PAARGATNLLWRGGVAADTGGAGP--ALFRLW 280
>gi|398814683|ref|ZP_10573362.1| ring-hydroxylating dioxygenase, large terminal subunit
[Brevibacillus sp. BC25]
gi|398036162|gb|EJL29383.1| ring-hydroxylating dioxygenase, large terminal subunit
[Brevibacillus sp. BC25]
Length = 326
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSE 178
V D EW Y + DV D P+ +T+ +++VL+++ +G + +D C HR A LS
Sbjct: 3 VQDTVLRNEWIVAYRSVDV-QDRPIQVTIMGERVVLFRNEEG-IHAFKDLCIHRGAALSL 60
Query: 179 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK 238
G + +G+L C YHGW++E G CVKIPQLPAD IP A Y E G VWV + +
Sbjct: 61 GCVREGKLVCPYHGWEYEASGACVKIPQLPADQAIPGKARAVLYGCAERYGFVWVNLGNQ 120
Query: 239 TPPNPDKLPWFENFARPGFQDV----STIHELPYDHSILLENLMDPAHIPISHD 288
+P D LP FE+ F++V T+ P ++EN +D H+ + H+
Sbjct: 121 SPEFFD-LPEFEDHH---FRNVIWGPQTVTAKP---PRIVENFLDVGHLAVVHE 167
>gi|254430294|ref|ZP_05043997.1| rieske (2Fe-2S) domain protein [Cyanobium sp. PCC 7001]
gi|197624747|gb|EDY37306.1| rieske (2Fe-2S) domain protein [Cyanobium sp. PCC 7001]
Length = 330
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
DAP T+ ++ +LY+D G+ D+CPHR A G + L C YHGW F+ EG
Sbjct: 20 DAPCQATLLNRTYILYRDDTGQPHAAVDQCPHRGASFKAGWVEGSCLRCPYHGWSFDAEG 79
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 259
CV+IP IP A + T V+ES G VW++ + +P +P F G++
Sbjct: 80 HCVRIPADQPGVPIPAQARLHTLPVQESSGFVWIFPGDPSLADPSLIPAFPELGAEGWRP 139
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTE 308
VS + + S ++E+ +D +H P H + R+DA L FEV E
Sbjct: 140 VSGEYLWHANFSRVVESGLDTSHAPFVH--KPFFPNRDDAAVLPFEVAE 186
>gi|444916129|ref|ZP_21236252.1| hypothetical protein D187_08534 [Cystobacter fuscus DSM 2262]
gi|444712629|gb|ELW53546.1| hypothetical protein D187_08534 [Cystobacter fuscus DSM 2262]
Length = 340
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 18/223 (8%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDG 184
E W P+ ++++V PLGLT+ ++IVL++DG+G L +D+CPHR KLS G++ DG
Sbjct: 16 EVWTPVAMSREV-RGKPLGLTLAGERIVLFRDGRGTLSALRDQCPHRGVKLSLGKVGADG 74
Query: 185 RLECLYHGWQFEGEGKCVKIP--QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 242
LEC +HGW+F G C IP LP + + + V + V+E G++W++ ++
Sbjct: 75 CLECPFHGWRFSASGSCTHIPLNALPEEKR--QRYAVTAFPVRERGGLIWLY-TRPGGEA 131
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDYSAKREDAQP 301
PD+ E+ +PG V E H + +EN++D H+P H RT R +P
Sbjct: 132 PDEPYVPESLEKPGVH-VGFYAETWNAHWTRAMENMLDSPHLPFVHQRTIGRGLRRRMKP 190
Query: 302 -----LGFEVTERTDRGFAGQWGREKDGSM----PNFLRFEAP 335
+ E T R ++ G GS+ PN +R P
Sbjct: 191 ESTMEVEVEPTSTGFRTWSSMDGVPPQGSLDWLRPNGMRLNIP 233
>gi|225620020|ref|YP_002721277.1| Rieske (2Fe-2S) domain-containing protein [Brachyspira
hyodysenteriae WA1]
gi|225214839|gb|ACN83573.1| Rieske (2Fe-2S) domain protein [Brachyspira hyodysenteriae WA1]
Length = 327
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 130/297 (43%), Gaps = 25/297 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +K+V + PL ++ +V ++D + C D+C HR A LS G++ +
Sbjct: 6 WYAVLDSKEVKRNKPLFAKRLNKNLVFWRDSNNNICCIDDKCCHRGASLSHGKICGNNIA 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG+QF+ GK V IP + ++ ++ V YEV+E G +W+W K N D++
Sbjct: 66 CPFHGFQFDKTGKTVMIPANGKNTEVNKNFFVEGYEVRELYGFIWLWYGDKDKIN-DRIM 124
Query: 248 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDYSAKR---------- 296
+ ++ F STI + ++H + +EN +D HI H T +
Sbjct: 125 FPDDLKDKKFS-YSTIRDQWHNHYTRCIENQLDVVHIAFVHYNTIGKGNKTVVNGPLVEL 183
Query: 297 -EDAQPLGFEVTERTDRGFAGQWGRE-KDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHY 354
ED L F V D G E K FL F P Q N EK
Sbjct: 184 DEDNNILKFYVNNVIDSGQKALRESEMKKEDFKYFLYFYFPNTWQ-------NYIFEKMR 236
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTS-PWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
G+F P +++ +RF + P+IK + + + KV +QD + +Q
Sbjct: 237 VFGVFA--PVDDENTVIYMRFYQKIVNIPFIKSIVNLIGKKYSDKVLKQDKNVVKTQ 291
>gi|412992548|emb|CCO18528.1| predicted protein [Bathycoccus prasinos]
Length = 655
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 122/265 (46%), Gaps = 36/265 (13%)
Query: 77 TEPKLTKCHAVTDMSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKD 136
T +L + V D +S+ P K+ + P E E ++ WT++WYP+ +
Sbjct: 29 TTGRLNETLEVEDTASAIFP-----KIGMHPDREHLVEKE---GNFSWTKQWYPVAVADM 80
Query: 137 VPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQLI-DGRLECLYHGWQ 194
+ P +T+ +V++ D GE +D+CPHRLA LSEG++ DG L C YH W+
Sbjct: 81 IDPLKPHPVTLLGTDLVVWYDSVGEKWNVFEDKCPHRLAPLSEGRVEPDGSLLCAYHAWR 140
Query: 195 FEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW--------------- 234
F+GEGKC +PQ + R +C + E QG++W W
Sbjct: 141 FDGEGKCTAMPQANNQREEERIKGNPLSCASSRPTMEEQGLIWCWGESSSGSDETVKTEA 200
Query: 235 MSQKTPPNPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDY 292
M P P+ ++ PG +++ + +LPY EN +DPAH +SH T
Sbjct: 201 MMTPAPVIPEMKGVTKSGEAPGGAYRNHWQMRDLPYGWCAFFENAIDPAHAVVSH-HTLV 259
Query: 293 SAKREDAQPLGFE-VTERTDRGFAG 316
+ +D P GF V ER AG
Sbjct: 260 GDRYKD--PAGFACVVERPTTDNAG 282
>gi|393719683|ref|ZP_10339610.1| Rieske (2Fe-2S) protein [Sphingomonas echinoides ATCC 14820]
Length = 326
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
DAP+ +T+ IVL++D G+ + DRCPHR LS G + DG + C YHGW+F+G G
Sbjct: 29 DAPVAITLQGAPIVLFRDADGQAQALHDRCPHRGVALSLGTVSDGTIACAYHGWRFDGAG 88
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPW-FENFARPGFQ 258
+C IP L D I +SA VR Y V E G VW+W P+ P + F R FQ
Sbjct: 89 RCRHIPSLREDQTI-KSAPVRRYPVAEQDGYVWLWTGTD---EPEGAPLAIDGFDR--FQ 142
Query: 259 DVSTIHELPYDHSILLENLMDPAHIPISH 287
+ EL + + +EN +D H +H
Sbjct: 143 WLQGAMELACEAILPIENNLDICHAAFTH 171
>gi|347528258|ref|YP_004835005.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136939|dbj|BAK66548.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 351
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +KD +++ ++ +V+Y+ G L +DRCPHR A LS+G+ L
Sbjct: 7 WYMAGWSKDFTGTDVQSVSILNEPLVMYRADNGSLVALEDRCPHRAAPLSKGRREGNDLR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C+YHG F +G C +P P IP+S CVR+Y V E G WVWM + + +P
Sbjct: 67 CMYHGIMFGPDGACTDLPGQPV---IPKSVCVRSYNVIEKDGCAWVWMGEADRLDFALIP 123
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
F P + + ++ + +L++NL+D +H P H+ T + ++ Q L
Sbjct: 124 NFIGPDHPDWAITQSQLDIDAEGQLLIDNLLDVSHAPYVHEATFGVSDKKTVQTL 178
>gi|242059995|ref|XP_002459143.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
gi|241931118|gb|EES04263.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
Length = 542
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 146/335 (43%), Gaps = 41/335 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C Q+ C HR L G + +GR++
Sbjct: 221 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 280
Query: 188 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ +GKC K+P + +I C E +G+VW+W P P
Sbjct: 281 CPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCF------EQEGMVWIWPGDDPPKATIPS 334
Query: 245 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LLP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLV 386
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYS 355
+T + G G W P + F PC++ + E + H
Sbjct: 387 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLH 439
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEV 413
L +C P+ + K+ L+ R + +PW+K P + S A KV +D+ + Q E
Sbjct: 440 Q-LHVCLPSSRNKTRLLYRM-SLDFAPWLKHVPLMHLLWSHFAEKVLNEDLRLVLGQQER 497
Query: 414 LLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
++ ++ S D YR W D G
Sbjct: 498 MIN----GANIWNWPVSYDKLGIRYRLWRDAVERG 528
>gi|238026710|ref|YP_002910941.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
glumae BGR1]
gi|237875904|gb|ACR28237.1| Iron-sulfur cluster-binding protein, Rieske family [Burkholderia
glumae BGR1]
Length = 345
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ DV D APL +T+ + + L++ G+ E +D+CPHR A+LS G + G+L
Sbjct: 13 WYPVARAVDVTD-APLAVTLLGEALALWRTGENEFGVVKDKCPHRSARLSGGWVDQGKLV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW + G G CV+IPQ+P K V Y K G +WV + + PD
Sbjct: 72 CPYHGWTYNGVGACVRIPQMPQ-KKPSEKIVVDHYRCKTKYGYIWVALDEPIHDIPD--- 127
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
F A GF + E+ + +LEN +D +H H +T A+ + P +E
Sbjct: 128 -FPEAADAGFYRIHEFMEVWNCSGLRILENGLDNSHFAFVHRKTFGLAEMPEPAPARYED 186
Query: 307 TE 308
TE
Sbjct: 187 TE 188
>gi|416952084|ref|ZP_11935493.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
gi|325523120|gb|EGD01521.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
Length = 337
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 136 DVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQF 195
D DDAP+G + + +V Y++ ++ +D CPHR LS G + L C YHG +F
Sbjct: 6 DEIDDAPVGRVLLGEPVVFYRNAARKVVALEDACPHRKLPLSMGTVTGDHLRCGYHGLEF 65
Query: 196 EGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARP 255
+G C + P L ++IP +ACV+ Y V E G+VW+WM +PD + E++ P
Sbjct: 66 GADGACTRAPGL---SRIPPNACVKAYPVAERYGLVWIWMGAPDQADPDTILAVEHYGEP 122
Query: 256 GFQ-DVSTIHELPYDHSILLENLMDPAHIPISH 287
G+ + + + + +NL+DP+H+ H
Sbjct: 123 GWGVNRGPAMNVDCHYLYMTDNLLDPSHVAYVH 155
>gi|416952092|ref|ZP_11935501.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
gi|325523128|gb|EGD01529.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
Length = 349
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY KDV A +T+ ++IVLY+ G +D CPHR+ LS G+L +E
Sbjct: 7 WYVAGWDKDVTR-ALTPVTMLGERIVLYRKADGTPVALEDACPHRMLPLSMGRLTGDDVE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ G CV+ P A+IP A VR Y V E G+VWVWM + +PD L
Sbjct: 66 CGYHGLTFDCSGACVRA---PGSARIPAQAVVRRYPVAERYGLVWVWMGDEAAADPDALL 122
Query: 248 WFENFARPGF----QDVSTI--HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
+ + P + D T+ H L + +NL+DP+H+ H R+ + +++P
Sbjct: 123 TIDEWDDPAWGLNRGDAMTVDCHYL-----YMTDNLLDPSHVAWVH-RSSFGNAACESEP 176
Query: 302 LGFEVTERTDRGFAGQWGREKDGS--MPNFLRFEAPCVLQNNRE 343
L + + + +W R+ D + F+RF C + + E
Sbjct: 177 L--KTSAAANGVTVSRWMRDVDVAPFYAKFVRFAGRCDRKQHYE 218
>gi|294011169|ref|YP_003544629.1| putative Rieske protein [Sphingobium japonicum UT26S]
gi|292674499|dbj|BAI96017.1| putative Rieske protein [Sphingobium japonicum UT26S]
Length = 430
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ +V + +++++D +GE QDRCPHR A LS G + +
Sbjct: 80 WYVAALSSEVDATQLFHRRILGMSVLIFRDAQGEAVALQDRCPHRFAPLSMGSRVGDAIA 139
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+ G CV P ++PR VR + + E G +W+WM+++ +P LP
Sbjct: 140 CPYHGLRFDAGGHCVHNPH--GRGQLPRGQVVRGFPLIERHGFIWIWMAEEA-ADPALLP 196
Query: 248 WFENFARPGFQDVS-TIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
F R V T +LP D+ ++L+N+MD +H+ H + R PL +V
Sbjct: 197 DFSPLDRGHANGVGHTYMKLPVDYRLILDNVMDLSHVDYVH--GEIITTRGQLSPLIPQV 254
Query: 307 TERTDRGFAGQW 318
E T+ + W
Sbjct: 255 -EETENSVSASW 265
>gi|113477070|ref|YP_723131.1| Rieske (2Fe-2S) protein [Trichodesmium erythraeum IMS101]
gi|110168118|gb|ABG52658.1| Rieske (2Fe-2S) region [Trichodesmium erythraeum IMS101]
Length = 349
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 92/158 (58%), Gaps = 8/158 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + ++ PL +T++ Q IVLY+ G++ +D CPHR KLS G++I LE
Sbjct: 22 WYAVARSIEL-QSQPLSITLWHQTIVLYRGCSGKVYGLEDICPHRFVKLSSGRVIADELE 80
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN---PD 244
C YHGW+FE GKC IP L ++ K+P S +RT+ V+E G +W++ K+ N P
Sbjct: 81 CTYHGWRFESNGKCSHIPYLASNQKLP-SCQIRTFPVQELHGFIWLFPGDKSLANLISPL 139
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
++P +++ + ++ + +S L+ENLMD H
Sbjct: 140 EIPEWDHL---NYIATISVIKCRAHYSYLVENLMDMYH 174
>gi|56752068|ref|YP_172769.1| hypothetical protein syc2059_d [Synechococcus elongatus PCC 6301]
gi|56687027|dbj|BAD80249.1| unknown protein [Synechococcus elongatus PCC 6301]
Length = 233
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ L + V D PL +T+ + I LY+D G++ DRC HR A LS G + + L
Sbjct: 7 WYPVALAQKV-GDRPLSVTLCGEAIALYRDSAGQIHALSDRCVHRGAALSGGWVENDCLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQ++ +G C KIP +IP +A V Y+ E G+VW++ + LP
Sbjct: 66 CPYHGWQYDAQGHCRKIPANTEQQRIPFAAKVPHYDAIERYGLVWLFYGDLPEADRPPLP 125
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+ P ++ V ++ + ENLMD AH P +H + +A +P E
Sbjct: 126 PLPEYDDPAWRTVQGEVTYTTHYTRVTENLMDFAHAPFTHSGSFGAASDPLIEPYKVE 183
>gi|384249736|gb|EIE23217.1| Rieske-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 480
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 39/189 (20%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ WT+ WYPL + +D+ P + + +V+++D + RC +D CPHRLA LS+G++
Sbjct: 6 FVWTKHWYPLAVVEDLNPQKPFATKLLGKDLVIWQDADKQWRCFEDICPHRLAPLSQGRI 65
Query: 182 --IDGRLECLYHGWQFEGEGKCVKIPQLPADAK-------IPRSACVRTYEVKESQGVVW 232
DG L+C YHGW+F G G + IPQ D+ + +CV TY V+ G+VW
Sbjct: 66 EPSDGSLQCSYHGWRFGGSGAAIAIPQAAHDSPQSERTSLASKRSCVATYPVQVQLGLVW 125
Query: 233 VW-----------------MSQK---TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSI 272
VW ++Q+ P L +NF R + P + I
Sbjct: 126 VWPESGPHAFIESSAEQPALNQRVKEVAPEDVALTTNQNFVR----------DFPVAYDI 175
Query: 273 LLENLMDPA 281
L EN+ D A
Sbjct: 176 LFENISDQA 184
>gi|167569836|ref|ZP_02362710.1| Rieske [Burkholderia oklahomensis C6786]
Length = 334
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D W PL L++ V +APLG+ + +VLY+D G +R +DRC HR A LS G++
Sbjct: 10 DSAAHWLPLALSEQVNGEAPLGVVCMGRPLVLYRDASGAVRAMEDRCVHRRAPLSLGRIT 69
Query: 183 -DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
DGRL+C YHGW ++G G CV IP L ++P R YE +E G VW
Sbjct: 70 PDGRLQCGYHGWTYDGATGACVAIPNLSEHERVPAHYVARAYETRERDGFVW 121
>gi|260427622|ref|ZP_05781601.1| rieske domain protein [Citreicella sp. SE45]
gi|260422114|gb|EEX15365.1| rieske domain protein [Citreicella sp. SE45]
Length = 356
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 27/199 (13%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ DD T+ + +V+++ G + +DRCPHRL LS+G+ I ++
Sbjct: 9 WYVAGWSTEI-DDELRRFTILGEHVVMFRTSDGSVAALEDRCPHRLLPLSKGKRIGDTVQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ G CV++ P +P+SA V Y + E G+VW+WM +P+ +
Sbjct: 68 CGYHGLTFDCSGACVRV---PGQTNLPKSAYVEAYPIVEKHGIVWIWMGDAEKADPEAVF 124
Query: 248 WFENFARPGF--QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRE-------- 297
F PG+ +H L ++ + ENL+DPAH+ H T +A E
Sbjct: 125 DMPEFTDPGWAAHHGDALH-LKSNYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVQT 183
Query: 298 ------------DAQPLGF 304
DA+P+GF
Sbjct: 184 EGEAIVAWRWIRDAEPIGF 202
>gi|126658476|ref|ZP_01729624.1| Rieske (2Fe-2S) region [Cyanothece sp. CCY0110]
gi|126620218|gb|EAZ90939.1| Rieske (2Fe-2S) region [Cyanothece sp. CCY0110]
Length = 344
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 13/175 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V + P+ + ++ IVLY+D KG++ +RCPHR KLSEG++++ LE
Sbjct: 13 WYVVAQSIEVTN-KPIEVRLWYHSIVLYRDSKGKIHGLDNRCPHRQVKLSEGKVVENSLE 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM-SQKT----PPN 242
C YHGWQF+ +G C IP L + +P + Y VKE G +W+++ SQ+
Sbjct: 72 CAYHGWQFDSKGVCTFIPYLLDNQVLPNCK-ISAYPVKECYGFIWIYLGSQQILGLQKIE 130
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRE 297
P ++P +E + + ++ + S L+ENLMD H H DY A E
Sbjct: 131 PIRIPEWEQL---NYINTISVIDCQAHFSFLIENLMDMYH---GHLHNDYQAWTE 179
>gi|119512027|ref|ZP_01631122.1| Rieske (2Fe-2S) region protein [Nodularia spumigena CCY9414]
gi|119463317|gb|EAW44259.1| Rieske (2Fe-2S) region protein [Nodularia spumigena CCY9414]
Length = 357
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 152 IVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADA 211
I LY+D G++ +DRCPHR KLS GQ+I LEC YHGW+F G+C +P L +
Sbjct: 54 IALYRDSTGKIHALEDRCPHRQVKLSHGQVIGNELECAYHGWRFNSAGECAAVPYLAENQ 113
Query: 212 KIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKLPWFENFARPGFQDVSTIHELPYDH 270
K+P + +R Y VKE G +W++ + P P LP +E+ VS IH + +
Sbjct: 114 KLP-TCEIRHYPVKEQDGFIWLFPGKAEPSVEPLGLPEWEHLNY--IATVSVIHTQAH-Y 169
Query: 271 SILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
S L+ENLMD H H D A E + E R D + Q
Sbjct: 170 SYLIENLMDMYH---GHLHQDLQAWAEASLQDIDENNYRVDAHYIAQ 213
>gi|168702405|ref|ZP_02734682.1| iron-sulfur cluster-binding protein, Rieske family [Gemmata
obscuriglobus UQM 2246]
Length = 335
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 19/186 (10%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+ W P+ L++ + D P+G+ V +Q + L++ GE+ D CPHR KLS G+++ R
Sbjct: 5 DHWQPVLLSRRLRRD-PVGVVVANQPVALFRTSGGEVAALSDVCPHRRLKLSVGKVVGDR 63
Query: 186 LECLYHGWQFE--GEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
L+C YHGW F+ G G+ P+L +AC +Y+ +E+ G+VW+ PP P
Sbjct: 64 LQCKYHGWTFDDCGNGESPAAPKL--------TACTASYDAREAHGLVWIKSRTSAPPFP 115
Query: 244 DKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
D PGF + T+ H +P + ++N + H HD Y R +
Sbjct: 116 D-------VTAPGFYPICTLEHTVPAPLELAVDNFNEIEHSATVHDTFGYDLDRLSEVKV 168
Query: 303 GFEVTE 308
FE T+
Sbjct: 169 AFESTD 174
>gi|429125292|ref|ZP_19185824.1| Rieske (2Fe-2S) domain-containing protein [Brachyspira hampsonii
30446]
gi|426278846|gb|EKV55876.1| Rieske (2Fe-2S) domain-containing protein [Brachyspira hampsonii
30446]
Length = 330
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 23/296 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +K+V + PL ++ +V ++D + C D+C HR A LS G++ +
Sbjct: 6 WYAVLDSKEVKKNKPLFAKRLNKNLVFWRDSNNNICCIDDKCCHRGASLSHGKVCGNNIA 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG+QF+ GK V IP + ++ ++ V YEV++ G +W+W K N DK+
Sbjct: 66 CPFHGFQFDKSGKTVMIPANGKNTEVNKNFFVEGYEVRDLYGFIWLWYGDKDKIN-DKIM 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKR----------- 296
+ ++ F + E ++ +EN +D HI H T +
Sbjct: 125 FPDDLKDKKFSYSTIKDEWNNHYTRCIENQLDVVHIAFVHHNTIGRGNKTIVNGPLAELD 184
Query: 297 EDAQPLGFEVTERTDRGFAGQWGRE-KDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
ED L F V D G E K FL F P Q N EK
Sbjct: 185 EDNNILKFYVNNVIDNGQKALSASEMKKEDFKYFLYFYFPNTWQ-------NYIFEKMRI 237
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTS-PWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
G+F P +++ +RF + P+IK ++ + + V +QD + +Q
Sbjct: 238 FGVFA--PVDDENTVIYMRFYQKIVNIPFIKNIINFIGKKYSDIVLKQDKNVVKTQ 291
>gi|393778405|ref|ZP_10366679.1| oxidoreductase subunit alpha [Ralstonia sp. PBA]
gi|392714676|gb|EIZ02276.1| oxidoreductase subunit alpha [Ralstonia sp. PBA]
Length = 372
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID-GRL 186
WYP+ + + GL V D+ IV+++ +GE+ DRC H+ LSE +L+D GRL
Sbjct: 11 WYPVGFSHEFKAGDLQGLKVADKPIVIWRTAEGEVVAFDDRCCHKRFPLSESKLLDDGRL 70
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW---MSQKTPPNP 243
EC YHG ++ GKCV+IP P D IP A + T +KE GVVW+W + Q + NP
Sbjct: 71 ECAYHGLCYDSSGKCVEIPSQP-DKAIPPQARLHTVPIKEQDGVVWLWPGDVEQASTLNP 129
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
+ P + + I E P ++ +L+ENL+D +H HD
Sbjct: 130 PRTPELTDTSCVTAVSPERI-EAPANYLLLIENLLDISHFYPLHD 173
>gi|172035343|ref|YP_001801844.1| oxygenase [Cyanothece sp. ATCC 51142]
gi|354555438|ref|ZP_08974739.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
gi|171696797|gb|ACB49778.1| probable oxygenase [Cyanothece sp. ATCC 51142]
gi|353552497|gb|EHC21892.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
Length = 344
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 104/191 (54%), Gaps = 14/191 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V P+ + ++ IVLY+D +G++ ++RCPHR KLSEG++++ LE
Sbjct: 13 WYVVAQSTEVTT-KPIEVRLWYHSIVLYRDSQGKIHGLENRCPHRQVKLSEGKVVENNLE 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK----TPP-N 242
C YHGW+F+ +G C IP L + +P+ + Y ++ES G +W+++ K +P
Sbjct: 72 CAYHGWRFDRQGMCSYIPYLSDNQGLPQCK-INVYPLEESDGFIWIFLGNKQLLESPTFK 130
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
P ++P +E+ G VS I + S L+ENLMD H H DY A E A+
Sbjct: 131 PIRIPEWEHLNYIG--TVSFI-DCQAHFSFLIENLMDMYH---GHLHNDYQAWTE-AKLK 183
Query: 303 GFEVTERTDRG 313
TE +G
Sbjct: 184 ELTTTEEAVKG 194
>gi|423095040|ref|ZP_17082836.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
gi|397886387|gb|EJL02870.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
Length = 346
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++ +A LG T+ ++ +V ++D +G ++ DRCPHR A L G+++ ++
Sbjct: 8 WYIAGWADELAQEALLGRTIVERPVVFFRDSQGVIQAIDDRCPHRFAPLHMGKVVGDSIQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G GKC P + IP++ACVR Y V E G +WVW+ + +P
Sbjct: 68 CPYHGLRFDGAGKCTHNPH--GEGTIPKAACVRGYPVVERHGAIWVWLGDPALASDALIP 125
Query: 248 WFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
F F + P + +L +N+MD +H+ H T
Sbjct: 126 DFSFFEQAPTHAKGKGYLPTRAHYELLSDNIMDLSHVDFLHPDT 169
>gi|351730088|ref|ZP_08947779.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
radicis N35]
Length = 326
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRL 186
W+P+ L DV P+ + + +Q +V+++D G ++ D+CPHR A+LS G++ DGRL
Sbjct: 7 WHPVALVGDVAQ-TPVAVQLLEQPVVVWRDAAGVVQAFADQCPHRGARLSLGRVTPDGRL 65
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
EC YHGWQF G+C ++P LP P + C R + +E+ G+VWV M L
Sbjct: 66 ECPYHGWQFAAGGRCTQVPALPTFVP-PPAHCARAFVAREAYGLVWVCMDGAG----TAL 120
Query: 247 PWF--ENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 288
P F E+ AR + ++ PYD + ++EN +D +H H+
Sbjct: 121 PVFAAEDDAR-----LRKLNCGPYDVAASAPRIIENFLDMSHFGFVHE 163
>gi|409409031|ref|ZP_11257466.1| phenylpropionate dioxygenase [Herbaspirillum sp. GW103]
gi|386432353|gb|EIJ45181.1| phenylpropionate dioxygenase [Herbaspirillum sp. GW103]
Length = 343
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 10/191 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L + D P T+ +++V++ G QDRC HR AKLS+G + +G +
Sbjct: 13 WYALMPVSQL-KDGPQPFTLLGEKLVVWLKEDGTPAALQDRCCHRTAKLSKGFVENGNIV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW F GEG CV++PQ D +P ACV++Y KE G VWV + + PD
Sbjct: 72 CGYHGWTFNGEGACVRVPQ-SVDGSVPSGACVKSYFCKERYGYVWVALEEPLRDIPD--- 127
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
F PG++ + +E + ++EN D +H H T + +P +E+
Sbjct: 128 -FPEDGAPGYRRIFQFYERWETSPLRMMENSFDNSHFSYVHRAT--FGLYDQPKPEKYEI 184
Query: 307 TERTDRGFAGQ 317
E TD GF +
Sbjct: 185 NE-TDYGFEAE 194
>gi|148557165|ref|YP_001264747.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148502355|gb|ABQ70609.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 351
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 84/167 (50%), Gaps = 8/167 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++V D APLG T+ +++V ++ GK L DRCPHR LS G + DG LE
Sbjct: 14 WYMFAWGEEVAD-APLGRTIAGEELVCFR-GKDGLVVLADRCPHRFVPLSLGSVADGVLE 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F +G+C+ P P A VR+Y V E V+WVW +PD +
Sbjct: 72 CAYHGLRFGSDGRCMFNPL----GDPPERAVVRSYPVVERDRVIWVWTGDPALADPDGIA 127
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
F A P V+ + D+ + ++NL D H+ H DY A
Sbjct: 128 DFSFLADPARATVTGYAHVRADYQLAIDNLSDLTHVQFVH--RDYQA 172
>gi|75215802|sp|Q9XJ38.1|CAO_DUNSA RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|5478801|dbj|BAA82481.1| chlorophyll b synthase [Dunaliella salina]
Length = 463
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 147/369 (39%), Gaps = 37/369 (10%)
Query: 93 SAVPTPDDHKVLVGPASEEESRGERRVADYDWTEE-WYPLYLTKDVPDDAPLGLTVFDQQ 151
S VP P V GP ++ R + D WYP K + + +F
Sbjct: 99 SHVPQPS-QAVRRGPKPKDSRRLRSSLELEDGLRNFWYPTEFAKKLEPGMMVPFDLFGVP 157
Query: 152 IVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADA 211
VL++D C +D C HR LS G++I+G ++C YHGW+F+G G C K+P
Sbjct: 158 WVLFRDEHSAPTCIKDSCAHRACPLSLGKVINGHVQCPYHGWEFDGSGACTKMPS----T 213
Query: 212 KIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV--STIHELPYD 269
++ V E G VWVW PP+ + A P DV + ++P +
Sbjct: 214 RMCHGVGVAALPCVEKDGFVWVWPGDGPPPDLPP----DFTAPPAGYDVHAEIMVDVPVE 269
Query: 270 HSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF 329
H +L+ENL+D AH P +H T P+ V + AG W P
Sbjct: 270 HGLLMENLLDLAHAPFTHTTT-----FARGWPIPEAVRFHATKMLAGDW-----DPYPIS 319
Query: 330 LRFEAPCVL-------QNNRESVDNKTGE-KHYSTGLFLCRPTGQGKSMLIVRFGTTGTS 381
+ F PC+ Q + K E K + L +C P+ +G + L+ R
Sbjct: 320 MSFNPPCIALSTIGLSQPGKIMRGYKAEECKRHLHQLHVCMPSKEGHTRLLYRMSLDFWG 379
Query: 382 PWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYR 439
W K P D + + A +V +D+ + Q ++ + + D YR
Sbjct: 380 -WAKHVPFVDVLWKKIAGQVLGEDLVLVLGQQARMIG----GDDTWCTPMPYDKLAVRYR 434
Query: 440 KWMDKAGHG 448
+W + G
Sbjct: 435 RWRNMVADG 443
>gi|428219628|ref|YP_007104093.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427991410|gb|AFY71665.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena sp. PCC
7367]
Length = 391
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + L+ ++ + PL +T + + IV+Y+D KG++ +D CPHR KLS G ++ LE
Sbjct: 63 WYVVALSSEL-QEKPLAVTFWGEAIVIYRDSKGQVHALEDTCPHRFVKLSHGCVVGDHLE 121
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW---MSQKTPPNPD 244
C YHGWQF +G C +P L + K+P ++ Y V++ G +W++ ++ P
Sbjct: 122 CAYHGWQFNDQGNCAVVPYLAENQKLPNCQ-IKRYAVQDLDGFIWLFPGDLALAEQVEPM 180
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
+P +++ V+TI + +S L+ENLMD H H +Y A A L
Sbjct: 181 GVPEWDHLNY--IASVTTI-DTEAHYSYLIENLMDMYH---GHLHDNYQA-WASASLLNI 233
Query: 305 EVTE-RTDRGFAGQ 317
E ++ R D + Q
Sbjct: 234 EASDRRVDAHYEAQ 247
>gi|407711022|ref|YP_006794886.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
gi|407239705|gb|AFT89903.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
Length = 361
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 87/173 (50%), Gaps = 16/173 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ +V +APL T+ D+ +V Y+ G+ DRCPHR A LS G+L+DG LE
Sbjct: 8 WYVAALSSEVAANAPLARTLLDEPVVFYRTAGGQAVALADRCPHRFAPLSRGRLVDGALE 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPAD----AKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
C YHG +F +G+CV P + A P A R Y V+E G VW W P +P
Sbjct: 68 CPYHGLRFGADGRCVFNPHGNRNGNDTASPPARAQARHYPVRERYGAVWFW-----PGDP 122
Query: 244 DK-----LPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
++ LP F+ R F +H ++ + +NL+D +H H T
Sbjct: 123 ERAAHTPLPAFDYLDPRENFTTGRYLHTRA-NYQLSADNLLDLSHFQYLHPET 174
>gi|67921495|ref|ZP_00515013.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
gi|67856607|gb|EAM51848.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
Length = 355
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++++ P+ + ++ + IVLY+D G++ +RCPHR KLSEG+++ LE
Sbjct: 13 WYVVAQSREITT-KPIEVKLWYRSIVLYRDSTGKIHGLDNRCPHRQVKLSEGKVVGNSLE 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAK--------IPRSACVRTYEVKESQGVVWVWMSQK- 238
C YHGWQF G+G C IP L ++ +PRS + +Y V+E G VW+++ +K
Sbjct: 72 CAYHGWQFNGQGSCTFIPYLNSNLNGKFSKNQALPRSQ-IESYPVQEDDGFVWIFLGEKH 130
Query: 239 ----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
P +P +++ G VS I + S L+ENLMD H H DY A
Sbjct: 131 LLESKQVQPMSIPEWQHLNYIG--TVSVI-DCQAHFSFLIENLMDMYH---GHLHDDYQA 184
Query: 295 KREDAQPLGFEVTERTDRGF 314
DA+ TE +G
Sbjct: 185 -WTDAKLKELLTTEEGVKGL 203
>gi|332531588|ref|ZP_08407485.1| Rieske (2Fe-2S) protein [Hylemonella gracilis ATCC 19624]
gi|332038951|gb|EGI75380.1| Rieske (2Fe-2S) protein [Hylemonella gracilis ATCC 19624]
Length = 362
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++++ D PLG V ++I Y+D G++ QD CPHR A LS G + DG+L
Sbjct: 12 WYVAASSQEIGADKPLGRMVCGERIAFYRDAAGKMVAVQDFCPHRGAPLSLGHVCDGQLT 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ ++++ V E G VWVW + + KLP
Sbjct: 72 CGYHGLVMGCDGKTVSMP----GQRVRGFPAIKSFPVAERYGFVWVWTGEAALADEAKLP 127
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
E F P + ++ + D+ ++++NLMD H H T K D P V
Sbjct: 128 VLEFFDHPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHS-TSIGQKEIDETPCKTTVE 186
Query: 308 ERT 310
+ T
Sbjct: 187 DDT 189
>gi|110679615|ref|YP_682622.1| vanillate O-demethylase oxygenase [Roseobacter denitrificans OCh
114]
gi|109455731|gb|ABG31936.1| vanillate O-demethylase oxygenase, putative [Roseobacter
denitrificans OCh 114]
Length = 356
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ DDA + ++L++ G + +D CPHR LS G+ I ++
Sbjct: 9 WYVAAWSSEI-DDALRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGKRIGDTVQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ +GKCV++ P +IP SACV Y +E G+VW+WM + NPD +
Sbjct: 68 CGYHGLTFDTDGKCVRV---PGQDRIPPSACVDAYPTEERSGIVWIWMGEPERANPDDI- 123
Query: 248 WFENFARPGFQDVS-------TIHELPYDHSILLENLMDPAHIPISHDRT 290
F P F D S +H + ++ + ENL+DPAH+ H+ T
Sbjct: 124 ----FDLPQFHDDSWHMHHGGALH-IKSNYLNVAENLVDPAHVSFVHETT 168
>gi|416384569|ref|ZP_11684646.1| C3: Vanillate O-demethylase oxygenase-like protein [Crocosphaera
watsonii WH 0003]
gi|357265012|gb|EHJ13825.1| C3: Vanillate O-demethylase oxygenase-like protein [Crocosphaera
watsonii WH 0003]
Length = 355
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++++ P+ + ++ + IVLY+D G++ +RCPHR KLSEG+++ LE
Sbjct: 13 WYVVAQSREITT-KPIEVKLWYRSIVLYRDSTGKIHGLDNRCPHRQVKLSEGKVVGNSLE 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAK--------IPRSACVRTYEVKESQGVVWVWMSQK- 238
C YHGWQF G+G C IP L ++ +PRS + +Y V+E G VW+++ +K
Sbjct: 72 CAYHGWQFNGQGSCTFIPYLNSNLNGKFSKNQALPRSQ-IESYPVQEDDGFVWIFLGEKH 130
Query: 239 ----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
P +P +++ G VS I + S L+ENLMD H H DY A
Sbjct: 131 LLESKQVQPMSIPEWQHLNYIG--TVSVI-DCQAHFSFLIENLMDMYH---GHLHDDYQA 184
Query: 295 KREDAQPLGFEVTERTDRGF 314
DA+ TE +G
Sbjct: 185 -WTDAKLKELLTTEEGVKGL 203
>gi|119513069|ref|ZP_01632124.1| hypothetical protein N9414_17752 [Nodularia spumigena CCY9414]
gi|119462279|gb|EAW43261.1| hypothetical protein N9414_17752 [Nodularia spumigena CCY9414]
Length = 354
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + V P + + +Q+ VLY++ +G++ +D+C HR A LS G L D +
Sbjct: 6 WYACEFSS-VVTKKPKQIVMLNQRFVLYRNSQGQVVALKDQCSHRGAALSMGWLEDNCIR 64
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+FE +GKCV+IP IP+ A + +Y ++E G +W++ + +P
Sbjct: 65 CPYHGWKFESDGKCVQIPSNEVGTPIPKKANITSYPIQEKYGFIWLFYGELPESERPPIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
F P + ++ +LEN +D +H+PI H T
Sbjct: 125 ALPEFDDPNLHRSFLDFSVNTHYTRVLENALDLSHLPIVHANT 167
>gi|9944967|gb|AAG03051.1|AF284781_1 LLS1 protein [Oryza sativa Japonica Group]
Length = 540
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 146/336 (43%), Gaps = 42/336 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C + C HR L G + +GR++
Sbjct: 220 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQ 279
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW++ +GKC K+P + +R+ E +G+VW+W P + P
Sbjct: 280 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSL 334
Query: 246 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVK 386
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYST 356
+T + G G W P + F PC++ + E K H
Sbjct: 387 FLTPSS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQ 439
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEVL 414
L +C P+ + K+ L+ R + +PWIK P + S A KV +D+ + Q +
Sbjct: 440 -LHICLPSSRNKTRLLYRM-SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRVVLGQQDGC 497
Query: 415 LKEKVPTKELYFNLRSIDTWVA-EYRKWMDKAGHGM 449
K L SI + YR W D G+
Sbjct: 498 QWRKC------LELASIICKLGIRYRLWRDAIERGV 527
>gi|21224238|ref|NP_630017.1| oxidase [Streptomyces coelicolor A3(2)]
gi|2815311|emb|CAA16434.1| putative oxidase [Streptomyces coelicolor A3(2)]
Length = 395
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 71/114 (62%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WYP+ ++V +D PLG+ Q +VL++D G L C RCPH+ A L +G++ +
Sbjct: 5 QWYPIVEAQEVGNDKPLGVRRMGQDLVLWRDIDGNLVCQGARCPHKGANLGDGRMKGNTI 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 240
EC YHG+++ +G C IP + ++A+IP S V TY V+E G+VW+W + P
Sbjct: 65 ECPYHGFRYGADGACRVIPAMGSEARIPGSLRVPTYPVREQFGLVWMWWGDERP 118
>gi|390167216|ref|ZP_10219213.1| putative Rieske protein [Sphingobium indicum B90A]
gi|389590161|gb|EIM68162.1| putative Rieske protein [Sphingobium indicum B90A]
Length = 430
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ +V + ++++++ +GE QDRCPHR A LS G + +
Sbjct: 80 WYVAALSSEVDATQLFHRRILGMSVLIFRNAQGEAVALQDRCPHRFAPLSMGSRVGDAIA 139
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+ G CV P ++PR VR + + E G +W+WM+++ +P LP
Sbjct: 140 CPYHGLRFDAGGHCVHNPH--GRGQLPRGQVVRGFPLIERHGFIWIWMAEEA-ADPALLP 196
Query: 248 WFENFARPGFQDVS-TIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
F R V T +LP D+ ++L+N+MD +H+ H + R PL +V
Sbjct: 197 DFSPLDRGHANGVGHTYMKLPVDYRLILDNVMDLSHVDYVH--GEIITTRGQLSPLIPQV 254
Query: 307 TERTDRGFAGQW 318
E T+ + W
Sbjct: 255 -EETENSVSASW 265
>gi|300871468|ref|YP_003786341.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
95/1000]
gi|300689169|gb|ADK31840.1| rieske (2Fe-2S) domain protein [Brachyspira pilosicoli 95/1000]
Length = 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +K+V + PL ++ +V ++D + C +D+C HR A LS G++ +
Sbjct: 6 WYGVLDSKEVKKNKPLFAKRLNKNLVFWRDENNNICCIEDKCCHRGASLSHGKVCGNNIA 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG+QF GK V IP + ++ V +YEV+E G++W+W K N DK+
Sbjct: 66 CPFHGFQFNKNGKVVMIPANGKNTQVDERFFVESYEVRELYGLIWLWYGDKDKIN-DKIM 124
Query: 248 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDYSAKR---------- 296
+ ++ F STI + ++H + +EN +D H+ H T +
Sbjct: 125 FPDDLKDKKFS-YSTIRDEWHNHYTRCIENQLDVVHVAFVHYNTIGKGNKTLVNGPLVEL 183
Query: 297 -EDAQPLGFEVTERTDRGFAGQWGRE-KDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHY 354
ED L F V D G E K FL F P + Q N EK
Sbjct: 184 NEDTNTLKFYVNNVIDNGQKALSASEMKKEDFKYFLYFYFPNIWQ-------NYIFEKMR 236
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTS-PWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
F P +++ +RF + P IK ++ + ++ V +QD + +Q
Sbjct: 237 VFAAF--APVDDENTVVYIRFYQKVVNIPIIKNIVNFIGKKFSAYVLKQDKDVVKTQ 291
>gi|404475340|ref|YP_006706771.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
B2904]
gi|404436829|gb|AFR70023.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
B2904]
Length = 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +K+V + PL ++ +V ++D + C +D+C HR A LS G++ +
Sbjct: 6 WYGVLDSKEVKKNKPLFAKRLNKNLVFWRDENNNICCIEDKCCHRGASLSHGRVCGNNIA 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG+QF GK V IP + ++ V +YEV+E G++W+W K N DK+
Sbjct: 66 CPFHGFQFNQNGKVVMIPANGKNTQVDEKFFVESYEVRELYGLIWLWYGDKDKIN-DKIM 124
Query: 248 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDYSAKR---------- 296
+ ++ F STI + ++H + +EN +D H+ H T +
Sbjct: 125 FPDDLKDKKFS-YSTIRDEWHNHYTRCIENQLDVVHVAFVHYNTIGKGNKTLVNGPLVEL 183
Query: 297 -EDAQPLGFEVTERTDRGFAGQWGRE-KDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHY 354
ED L F V D G E K FL F P + Q N EK
Sbjct: 184 NEDTNTLKFYVNNVIDNGQKALSASEMKKEDFKYFLYFYFPNIWQ-------NYIFEKMR 236
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTS-PWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
F P +++ +RF + P IK ++ + ++ V +QD + +Q
Sbjct: 237 VFAAF--APVDDENTVVYIRFYQKVVNIPIIKNIVNFIGKKFSAYVLKQDKDVVKTQ 291
>gi|389871176|ref|YP_006378595.1| vanillate O-demethylase oxygenase [Advenella kashmirensis WT001]
gi|388536425|gb|AFK61613.1| vanillate O-demethylase oxygenase [Advenella kashmirensis WT001]
Length = 363
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 16/198 (8%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
L + ++ +V Y+ G++ +D CPHR LS G+LID +EC YHG F G+G C+
Sbjct: 23 LQLLNEYLVFYRQQDGQVVALEDACPHRKLPLSMGRLIDDAVECGYHGLTFNGQGTCIFA 82
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGF---QDVS 261
P AKIPR+A V+++ E G+VWVWM + +P + P + Q +
Sbjct: 83 P----GAKIPRAATVKSFATTEKYGLVWVWMGDADKADASLIPQIAEYGHPDWGINQGDA 138
Query: 262 TIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRG-FAGQWGR 320
I E Y + + +NL+DP+H+ H R+ + +PL T TD G +W
Sbjct: 139 MIVECNYLY--MTDNLLDPSHVAWVH-RSSFGNSACVNEPL---TTTVTDSGVIVSRWMY 192
Query: 321 EKDGS--MPNFLRFEAPC 336
+ + + F++F C
Sbjct: 193 DTEVAPFYAKFVKFTGNC 210
>gi|431807777|ref|YP_007234675.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
P43/6/78]
gi|430781136|gb|AGA66420.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
P43/6/78]
Length = 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +K+V + PL ++ +V ++D + C +D+C HR A LS G++ +
Sbjct: 6 WYGVLDSKEVKKNKPLFAKRLNKNLVFWRDENNNICCIEDKCCHRGASLSHGKVCGNNIA 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG+QF GK V IP + ++ V +YEV+E G++W+W K N DK+
Sbjct: 66 CPFHGFQFNKNGKVVMIPANGKNTQVDERFFVESYEVRELYGLIWLWYGDKDKIN-DKIM 124
Query: 248 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDYSAKR---------- 296
+ ++ F STI + ++H + +EN +D H+ H T +
Sbjct: 125 FPDDLEDKKFS-YSTIRDEWHNHYTRCIENQLDVVHVAFVHYNTIGKGNKTLVNGPLVEL 183
Query: 297 -EDAQPLGFEVTERTDRGFAGQWGRE-KDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHY 354
ED L F V D G E K FL F P + Q N EK
Sbjct: 184 NEDTNTLKFYVNNVIDNGQKALSASEMKKEDFKYFLYFYFPNIWQ-------NYIFEKMR 236
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTS-PWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
F P +++ +RF + P IK ++ + ++ V +QD + +Q
Sbjct: 237 VFAAF--APVDDENTVVYIRFYQKVVNIPIIKNIVNFIGKKFSAYVLKQDKDVVKTQ 291
>gi|428316589|ref|YP_007114471.1| Rieske (2Fe-2S) iron-sulfur domain protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428240269|gb|AFZ06055.1| Rieske (2Fe-2S) iron-sulfur domain protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 356
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+ WY + + +V + PL ++++ IVL++D G++ +DRCPHR KLS GQ+
Sbjct: 26 DRWYAIARSTEVQNQ-PLAAKIWNRAIVLFRDSSGKINALEDRCPHRQVKLSHGQVKGDL 84
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+EC YHGW+ G+C ++ L + K+P +R+Y VKE G +W++ +T
Sbjct: 85 IECAYHGWRLNARGECAEVDYLAENQKLPNCK-IRSYPVKEKNGFIWLFPGDETQAEKID 143
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
L + + ++ + +S L+ENLMD H H D+ A
Sbjct: 144 LLDLSEWEHLNYIATVSVIDCQAHYSFLIENLMDMYH---GHLHDDWQA 189
>gi|415940797|ref|ZP_11555693.1| Rieske 2Fe-2S family protein [Herbaspirillum frisingense GSF30]
gi|407759115|gb|EKF68855.1| Rieske 2Fe-2S family protein [Herbaspirillum frisingense GSF30]
Length = 327
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D P T+ +++V++ G QDRC HR A+LS+G + +G + C YHGW F GEG
Sbjct: 8 DGPQPFTLLGEKLVVWLREDGTPAALQDRCCHRTARLSKGFVENGNIVCGYHGWTFNGEG 67
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 259
CV++PQ D +P ACV++Y KE G VWV + PD F PG++
Sbjct: 68 ACVRVPQ-SVDGSVPSGACVKSYHCKERYGYVWVALEDPLRDIPD----FPEDGAPGYRR 122
Query: 260 VSTIHELPYDHSIL--LENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
+ +E +D S L +EN D +H H T + +P +E+ E TD GF +
Sbjct: 123 IFQFYER-WDTSALRMMENSFDNSHFSYVHRAT--FGLYDQPKPEKYEI-EETDYGFEAE 178
>gi|237812428|ref|YP_002896879.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei MSHR346]
gi|254188948|ref|ZP_04895459.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|157936627|gb|EDO92297.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|237505159|gb|ACQ97477.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei MSHR346]
Length = 332
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 121/279 (43%), Gaps = 19/279 (6%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 240
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW ++
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWARAARGVD 129
Query: 241 P-NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI--PISHDR-TDYSAKR 296
P F +T+ L YD + L D H+ I+ R TDY
Sbjct: 130 TREPAAAAARATRCAQRFAGCATV-SLAYDDYV--AALADGPHLLMRIAGLRITDYVIA- 185
Query: 297 EDAQPLGFEVTERTDRGFAGQWGREKDGS-MPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
D +P G + +A + + G+ P LR AP +D + G
Sbjct: 186 -DPEPRGGRLAMERGVTWAARRHDHRFGAHYPWTLRLTAPQDGAPASVEIDTRDGAPMLW 244
Query: 356 TGLFLCRPTGQGKSMLIVRFG----TTGTSPWIKLFPDW 390
+ + P +G + L+ R G T G P LF W
Sbjct: 245 ASVAIA-PAARGATNLLWRGGVAADTGGAGP--ALFRLW 280
>gi|339503621|ref|YP_004691041.1| vanillate O-demethylase oxygenase [Roseobacter litoralis Och 149]
gi|338757614|gb|AEI94078.1| putative vanillate O-demethylase oxygenase subunit [Roseobacter
litoralis Och 149]
Length = 356
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ DD + ++L++ G + +D CPHR LS G+ I ++
Sbjct: 9 WYVAAWSTEI-DDELRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGKRIGDTVQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ +GKCV++ P +IP SACV Y ++E G+VW+WM + NPD +
Sbjct: 68 CGYHGLTFDTDGKCVRV---PGQDRIPLSACVDAYPIEERSGIVWIWMGEPERANPDDI- 123
Query: 248 WFENFARPGFQDVS-------TIHELPYDHSILLENLMDPAHIPISHDRT 290
F P F D S +H + ++ + ENL+DPAH+ H+ T
Sbjct: 124 ----FDLPQFHDDSWHMHHGGALH-IESNYLNVAENLVDPAHVSFVHETT 168
>gi|333915906|ref|YP_004489638.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
gi|333746106|gb|AEF91283.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
Length = 342
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 9/176 (5%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+ WYPL +++V + ++ +VLY+ G + +D CPHRL LS G+L
Sbjct: 7 DTWYPLTWSRNVGRQLS-AHRIVERDVVLYRTEAGAVVAMEDACPHRLLPLSMGKLKGDA 65
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+EC YHG F+ G+C ++ P IP +A V TY VKE+ G+VW+WM P D
Sbjct: 66 IECGYHGLTFDCSGRCTRV---PGQDMIPGNAVVTTYPVKENMGLVWIWMGD--PSRADS 120
Query: 246 LPWFE--NFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRED 298
+P F+ + P + V + ++ L +NL DPAH+ H T +A ED
Sbjct: 121 VPVFDLPQYHDPAWSAVEGDALRIQANYLNLADNLCDPAHVSFVHLSTLGNAASED 176
>gi|116620794|ref|YP_822950.1| Rieske (2Fe-2S) domain-containing protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116223956|gb|ABJ82665.1| Rieske (2Fe-2S) domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 363
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+ WY + ++ LG + ++Q+ L++D +G L CPHR A LS G L++G
Sbjct: 15 DAWYCAGWSHELRYPRILGRKLLNRQLALFRDQQGRLHALDAACPHRGADLSLGHLVEGH 74
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
++C HGW+F+ GKCV IP + KIP A TY V E QG++W+WM P P
Sbjct: 75 IQCPLHGWRFDDTGKCVCIPSQLPEVKIPPGAMASTYRVVERQGIIWIWMGAVRDPMP-- 132
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSI-----------LLENLMDPAHIPISHDRTDYSA 294
P QDV + H + +EN +D H+P H
Sbjct: 133 --------APPHQDVWEASPARHRHFLPPQLWRCSFFNAVENAIDNTHLPFLHAGL-LGP 183
Query: 295 KREDAQPLGFEVTERTDRGFAGQ 317
++ P V + RGF G+
Sbjct: 184 NQQQLYPTQNLVVDEDLRGFRGE 206
>gi|323530310|ref|YP_004232462.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1001]
gi|323387312|gb|ADX59402.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1001]
Length = 361
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 86/178 (48%), Gaps = 26/178 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ +V +APL T+ D+ +V Y+ G+ DRCPHR A LS G+L+DG LE
Sbjct: 8 WYVAALSSEVTANAPLARTLLDEPVVFYRTAGGQAVALADRCPHRFAPLSRGRLVDGALE 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPAD----AKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
C YHG +F +G+CV P + A P A R Y V+E G VW W P +P
Sbjct: 68 CPYHGLRFGADGRCVFNPHGNRNGNDTASPPARAQARHYPVRERYGAVWFW-----PGDP 122
Query: 244 DK-----LPWF------ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
++ LP F ENF + ++L D NL+D +H H T
Sbjct: 123 ERAAHTPLPAFHYLDPRENFTTGRYLHTRANYQLSAD------NLLDLSHFQYLHPET 174
>gi|149921995|ref|ZP_01910437.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
gi|149817160|gb|EDM76640.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
Length = 368
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 11/221 (4%)
Query: 126 EEWYPLYLTKDVPDDA-----PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQ 180
E WYP+ + D+P PLG+ ++ VL++D G + C CPHR A L++G+
Sbjct: 23 EAWYPIAPSTDLPARGRRATKPLGIMRLGRRWVLWRDEAGAVACMPAACPHRGADLAQGR 82
Query: 181 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYE-VKESQGVVWVWMSQKT 239
+ G +EC YHG+++ G+CV +P A++P VR V+E+ G++W+W ++
Sbjct: 83 VRQGEIECPYHGFRWSAGGECVALPCEGRGARVPAKLHVRERPIVREAHGLIWMWYGERE 142
Query: 240 PPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD-YSAKRED 298
P +LPWFE G + + + +E + D H P +H D + K
Sbjct: 143 PTA--QLPWFERSPVEGRRTATHTEVWEVSFTRTMEAMQDLHHFPFAHHGLDPWRGKAAR 200
Query: 299 AQPLGFEVT-ERTDRGFAGQWGREKDGSMPNFLRFEAPCVL 338
P V ER + A RE DGS + F+ C
Sbjct: 201 LDPYECRVEGERIYQKAALALERE-DGSTEPVVHFQLDCAF 240
>gi|288961898|ref|YP_003452208.1| vanillate monooxygenase [Azospirillum sp. B510]
gi|288914178|dbj|BAI75664.1| vanillate monooxygenase [Azospirillum sp. B510]
Length = 357
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V D PL T+ D+ +VL++D G R DRCPHR A LS G + L
Sbjct: 8 WYVAAWDHEVTADRPLARTLLDRPVVLFRDAAGTARALFDRCPHRFAPLSLGTVQGDSLR 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G G C + P + IP++A V + + E ++W+WM +P +P
Sbjct: 68 CAYHGLEFDGRGACTRNPH--GNGTIPKAAKVEAFPLVERHSLIWIWMGDPAKADPAAIP 125
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLE--NLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
F P Q V + L + + +LE N+MD +HI H T S A
Sbjct: 126 DFGCL-DPESQHVGKRY-LRVNANYMLENDNIMDLSHIQFLHASTLGSDAVAQA------ 177
Query: 306 VTERTDRGFAGQWGREKDGS-MPNFL 330
VTE + G R G MP+FL
Sbjct: 178 VTEVKEEGNTVWSLRTTHGEIMPDFL 203
>gi|47569539|ref|ZP_00240218.1| oxidase-related protein [Bacillus cereus G9241]
gi|47553795|gb|EAL12167.1| oxidase-related protein [Bacillus cereus G9241]
Length = 315
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +KD+ P+ V + VLY+D KGE++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYSKDI-KKIPVKKRVAGKDFVLYRDQKGEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 246
C YHGW+F+ G CV+IP P + IP+ + +Y VKE G++W++ S++TPP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFSHTFSYPVKEKIGLIWIYPDSEETPPEWQTF 130
Query: 247 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
EN F F H + +E+++D AH+ H +T + D+
Sbjct: 131 HVMENTPFKLSSFHATWNAHL-----TRSIESVLDIAHLAYVHKKTIGRKTKADSTNYKL 185
Query: 305 EVT----------ERTDRGFAGQW----GREKDGSMPNFLRF 332
E T + F QW G++++ S ++ F
Sbjct: 186 EGTLDQFIFSNGDAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|119504455|ref|ZP_01626534.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2080]
gi|119459477|gb|EAW40573.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2080]
Length = 364
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 119/254 (46%), Gaps = 27/254 (10%)
Query: 117 RRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKL 176
R D+ WY T ++ D P T+ ++ IV+YK+ G +RC HR A L
Sbjct: 2 REAEDWFLYNCWYAAAWTSEIDDGKPFSRTLLEKPIVIYKNESGVYVALDNRCCHRSAPL 61
Query: 177 SEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS 236
S G++ L C+YHG +++ G+CV+I P AKI + V +Y + + G++W+WM
Sbjct: 62 SMGRIEGDCLRCMYHGMKYDPSGQCVEI---PGQAKISSNHRVHSYPLVDRGGMLWIWMG 118
Query: 237 QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHS--ILLENLMDPAHIPISHDRT---- 290
+ N D +P FE P + + L YD + ++++NL D +H+ H T
Sbjct: 119 EAHKANSDDIPHFEPLDDPQWCGLPNRCYLHYDANWMLIVDNLADFSHLAFVHTSTLGGS 178
Query: 291 -DY---SAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVD 346
DY SA++ D GFE ER RG P +L+ P VD
Sbjct: 179 EDYATESAQQVDKLDNGFEF-ERWHRG----------SEQPPYLQKITPWPAD---RIVD 224
Query: 347 NKTGEKHYSTGLFL 360
+ + Y+ G+FL
Sbjct: 225 RRNFVRMYTPGIFL 238
>gi|443478861|ref|ZP_21068556.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena biceps
PCC 7429]
gi|443015788|gb|ELS30604.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena biceps
PCC 7429]
Length = 329
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + ++ P + Q+IVL+ D +G+ DRC HR A LS G + G +
Sbjct: 13 WYPVIPMSLLAEEQPKSFQLLGQKIVLWIDAEGKPAAALDRCCHRSAHLSLGSVKQGAIA 72
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQ++ G C+ +PQLP D IP++ + T+ +E G VWV M P N K+
Sbjct: 73 CAYHGWQYDRSGSCLHVPQLPTDTPIPKNYRIHTFACEERYGYVWVCMGD--PIN--KIA 128
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ P F+ + +E+ + ++EN MD AH H T SA + P E+
Sbjct: 129 EIPEASDPQFRLIPEFYEVWNCAGLRVMENEMDLAHPTFVHTTTFGSA--DHPIPEELEI 186
Query: 307 TERTDRGF 314
TE TD G
Sbjct: 187 TE-TDYGL 193
>gi|83716647|ref|YP_439697.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
thailandensis E264]
gi|167616266|ref|ZP_02384901.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis Bt4]
gi|257142836|ref|ZP_05591098.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
thailandensis E264]
gi|83650472|gb|ABC34536.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis E264]
Length = 355
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T +QIVL++D +G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + ++ + ACVR+Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVRSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ PG+ + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPDELVAPGYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|359400756|ref|ZP_09193733.1| hypothetical protein NSU_3419 [Novosphingobium pentaromativorans
US6-1]
gi|357597795|gb|EHJ59536.1| hypothetical protein NSU_3419 [Novosphingobium pentaromativorans
US6-1]
Length = 332
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 147 VFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 206
V + IVLY+ G + C +DRC HRLA LS G+ + CLYHG++F +G CV+I
Sbjct: 18 VLGEPIVLYRAADGSIVCMEDRCCHRLAPLSLGERDGDAVRCLYHGFKFARDGACVEI-- 75
Query: 207 LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHEL 266
P IPRSACV+TY E G +WVWM N D +P G+ + +
Sbjct: 76 -PGQKTIPRSACVQTYPATEKGGWIWVWMGDPARANLDLVPPAIGPGDEGWLTDQSHLDY 134
Query: 267 PYDHSILLENLMDPAHIPISHDRTDYSAKR--EDAQPLGFEVTERTDRGF 314
D+ ++ +NL D +H+ H R + A D +P +VT R DRG
Sbjct: 135 DADYQLINDNLTDFSHLSYVH-RNSFGATEFFADTRP---KVT-RLDRGI 179
>gi|148554606|ref|YP_001262188.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499796|gb|ABQ68050.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 338
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ ++ D P+G + +VLY++ G + DRCPHR LS G+ RL
Sbjct: 9 WYVAALSTEIAD-GPVGRRICSLPVVLYRERSGAVAALFDRCPHRFVPLSRGRCEGDRLV 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG ++G GKCV PQ + RS VR++ V+E G+VW+WM + +P
Sbjct: 68 CGYHGLAYDGAGKCVANPQ----GTVTRSLDVRSFPVEERHGLVWIWMGDPALRDTVAIP 123
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
F RP + ++ +N+MD +HI H T + K DA+
Sbjct: 124 DFSLLDRPAMRPQYGYMWTAAHFELMTDNIMDLSHIEFLHADTLGTEKIRDAK 176
>gi|423435967|ref|ZP_17412948.1| hypothetical protein IE9_02148 [Bacillus cereus BAG4X12-1]
gi|401123450|gb|EJQ31226.1| hypothetical protein IE9_02148 [Bacillus cereus BAG4X12-1]
Length = 315
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 28/224 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + KD+ P+ V + VLY+D KGE++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYAKDI-KKIPVKKRVAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 246
C YHGW+F+ G CV+IP P + IP+ A +Y VKE G++W++ S++TPP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFAHTSSYPVKEKIGLIWIYPDSEETPPEWKTF 130
Query: 247 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
EN F F H + +E+++D AH+ H +T ++ A+ +
Sbjct: 131 HVMENTPFKLSFFHATWNAHL-----TRSIESVLDIAHLAYVHKKT--IGRKTKAESTNY 183
Query: 305 EVTERTDR------------GFAGQW----GREKDGSMPNFLRF 332
++ D+ F QW G++++ S ++ F
Sbjct: 184 KLEGTLDQFIFSNGNAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|187921686|ref|YP_001890718.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187720124|gb|ACD21347.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 364
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V DAP+G+T QIVL++D +G++R +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPVGITRLGDQIVLWRDKEGQVRALEDRCPHRGARLSLGWNLGGSVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G+ K+P + ++ + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGIEIDGSGEVTKVPAV-SNCPLEGQKCVKSYPVEEHAGAIFLWFGDEAHKEPTPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|357126896|ref|XP_003565123.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 550
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 146/335 (43%), Gaps = 39/335 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ C Q+ C HR L G + +GR+
Sbjct: 229 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDRRPGCVQNTCAHRACPLDLGSVNEGRIT 288
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW++ +GKC K+P + +R E +G+VW+W TP P
Sbjct: 289 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRALPCFEQEGMVWIWPGDDTP-----TP 338
Query: 248 WFENFARP-GFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+ P GF + ELP +H +LL+NL+D AH P +H T AK
Sbjct: 339 TIPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSFVKF 396
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN--------RESVDNKTGEKHYSTG 357
+T + G G W P + F PC++ + E + H
Sbjct: 397 LTPTS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLHQ- 448
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEVLL 415
L +C P+ + K+ L+ R + +PWIK P + S A KV +D+ + Q
Sbjct: 449 LHICLPSSRNKTRLLYRM-SLDFAPWIKHIPFMHLLWSHFAEKVLNEDLRLVLGQ----- 502
Query: 416 KEKVPTKELYFNL-RSIDTWVAEYRKWMDKAGHGM 449
+E++ + +N S D YR W D G+
Sbjct: 503 QERMNSGANVWNWPVSYDKLGIRYRLWRDAVERGV 537
>gi|334118342|ref|ZP_08492432.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Microcoleus
vaginatus FGP-2]
gi|333460327|gb|EGK88937.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Microcoleus
vaginatus FGP-2]
Length = 356
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 5/169 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+ WY + T +V PL ++++ IVL++D G++ +DRCPHR KLS GQ+
Sbjct: 26 DRWYAIARTSEVHTQ-PLAAKIWNRAIVLFRDSAGKINALEDRCPHRQVKLSHGQVKGDL 84
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+EC YHGW+ G+C ++ L + K+P +R+Y VKE G +W++ + +
Sbjct: 85 IECAYHGWRLNARGECAEVDYLAENQKLPNCK-IRSYPVKEQNGFIWLFPGDEMQAEKNN 143
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
L + + ++ + +S L+ENLMD H H D+ A
Sbjct: 144 LLDLPEWEHLNYIATVSVIDCQAHYSFLIENLMDMYH---GHLHDDWQA 189
>gi|428219240|ref|YP_007103705.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427991022|gb|AFY71277.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena sp. PCC
7367]
Length = 360
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + + P + F+Q+ +Y+ G++ +RC HR A L+ G + D L
Sbjct: 6 WYAVEFSDRI-SETPCLVKAFNQEFAVYRTAAGKVLAMDNRCVHRGAALANGTVNDNCLT 64
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS----QKTPPNP 243
C YHGW+F+ GKCV IP PA IP A V TY+V E G +W++ + PP P
Sbjct: 65 CPYHGWKFDSSGKCVDIPANPAGMSIPNRAKVSTYDVVEKYGWIWLFWGDLPIDERPPIP 124
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ LP F N P + +S ++ ++EN +D AH P H
Sbjct: 125 E-LPHFYN---PDLKAISGDFNWSANYERIVENGLDIAHAPFVH 164
>gi|379011985|ref|YP_005269797.1| hypothetical protein Awo_c21320 [Acetobacterium woodii DSM 1030]
gi|375302774|gb|AFA48908.1| hypothetical protein containing a rieske (2Fe-2S) domain
[Acetobacterium woodii DSM 1030]
Length = 322
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + + ++ + G+T +++VL++D G ++C D+C HR A LS G L+ +
Sbjct: 5 QWYGILNSNEIKKNKLTGVTRMGEKLVLWRDETGAVKCIFDQCCHRGASLSAGTLVHDTI 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
+C +HG+ ++G G+ V+IP A +P V Y VKE G +W+W P+ +
Sbjct: 65 KCPFHGFSYDGTGRVVQIPANGKKAPVPEHFKVNAYVVKEKYGFIWLWYGAFQEVLPE-I 123
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
P+FE + R GF S P ++ +EN +D H+P H
Sbjct: 124 PFFE-YLRTGFSYGSFSEVWPVHYTRAIENQLDVVHLPFVH 163
>gi|427704113|ref|YP_007047335.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427347281|gb|AFY29994.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 338
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 6/166 (3%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
T+ WY + L+ V D PL +++VL +DG G + RC HR L+ G
Sbjct: 9 TDCWYAVGLSSQV-GDQPLAHRFQGREVVLMRDGGGRVLAFDGRCAHRGCSLAAGWARGE 67
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS-QKTPPNP 243
RL C YHGWQ++ G CV IP L A+ IPR A +RT+ +E G VW+W++ ++ P+
Sbjct: 68 RLVCPYHGWQYDALGTCVHIPALRAEESIPRQARLRTFPTRERHGFVWLWLAGRQASPDG 127
Query: 244 DKL--PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
D L P + D++ + + +I EN +DP H H
Sbjct: 128 DVLDIPELDGLTLRAGGDMAYTYATHFTRTI--ENGIDPTHAAFVH 171
>gi|53719245|ref|YP_108231.1| iron-sulfur protein, partial [Burkholderia pseudomallei K96243]
gi|52209659|emb|CAH35615.1| putative iron-sulphur protein [Burkholderia pseudomallei K96243]
Length = 321
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 233
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|434381532|ref|YP_006703315.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
WesB]
gi|404430181|emb|CCG56227.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
WesB]
Length = 328
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +K+V + PL ++ ++ ++D + C +D+C HR A LS G++ +
Sbjct: 6 WYGVLDSKEVKKNKPLFAKRLNKNLMFWRDENNNICCIEDKCCHRGASLSHGKVCGNNIA 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG+QF GK V IP + ++ V +YEV+E G++W+W K N DK+
Sbjct: 66 CPFHGFQFNKNGKVVMIPANGKNTQVDERFFVESYEVRELYGLIWLWYGDKDKIN-DKIM 124
Query: 248 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDYSAKR---------- 296
+ ++ F STI + ++H + +EN +D H+ H T +
Sbjct: 125 FPDDLKDKKFS-YSTIRDEWHNHYTRCIENQLDVVHVAFVHYNTIGKGNKTLVNGPLVEL 183
Query: 297 -EDAQPLGFEVTERTDRGFAGQWGRE-KDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHY 354
ED L F V D G E K FL F P + Q N EK
Sbjct: 184 NEDTNTLKFYVNNVIDNGQKALSASEMKKEDFKYFLYFYFPNIWQ-------NYIFEKMR 236
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTS-PWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
F P +++ +RF + P IK ++ + ++ V +QD + +Q
Sbjct: 237 VFAAF--APVDDENTVVYIRFYQKVVNIPIIKNIVNFIGKKFSAYVLKQDKDVVKTQ 291
>gi|167815593|ref|ZP_02447273.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 91]
Length = 135
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|307153793|ref|YP_003889177.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306984021|gb|ADN15902.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 355
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +V P + ++ Q IVLY+D KG + +DRCPHR KLS G + LE
Sbjct: 25 WYAVARSCEV-KRLPYSIILWHQAIVLYRDQKGIIHALEDRCPHRQVKLSHGSVSGNDLE 83
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW------MSQKTPP 241
C YHGW+F EGKC +P L K+P S +R+Y V E G +W++ + QK+
Sbjct: 84 CAYHGWRFNREGKCTFVPYLAEHQKLP-SCQIRSYPVLELDGFIWLFPGDEQALKQKS-L 141
Query: 242 NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
P +P +++ + ++ P +S L+ENLMD H + ++ ++A + Q
Sbjct: 142 QPMGVPEWDHL---NYIATVSVINCPGHYSFLIENLMDMYHGHLHNNYQAWAAAK--LQN 196
Query: 302 LGFEVTERTDRGFAGQ 317
L E R D + Q
Sbjct: 197 LSVE-QNRIDAYYEAQ 211
>gi|167719395|ref|ZP_02402631.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei DM98]
Length = 127
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|427416553|ref|ZP_18906736.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
gi|425759266|gb|EKV00119.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
Length = 372
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE--------LRCHQDRCPHRLAKLS 177
WY + + ++ D PLG+ ++ Q IVLY+D + +DRCPHR +LS
Sbjct: 34 NHWYVVAQSSELTDQ-PLGVVLWHQPIVLYRDSASADSSVRTQVVHALEDRCPHRQVRLS 92
Query: 178 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW--- 234
GQ+ +LEC+YHGWQF G CV++P L A K+P + +RTY VKE G +W++
Sbjct: 93 HGQVQGNQLECVYHGWQFNDTGACVEVPYLSAKQKLP-NCRLRTYPVKEQDGFIWLFPGD 151
Query: 235 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
Q P LP +++ + T + S L+ENLMD H
Sbjct: 152 ADQADTLTPMGLPEWDHI---NYIASYTTIDTQSHFSFLIENLMDMYH 196
>gi|296125678|ref|YP_003632930.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Brachyspira
murdochii DSM 12563]
gi|296017494|gb|ADG70731.1| Rieske (2Fe-2S) iron-sulfur domain protein [Brachyspira murdochii
DSM 12563]
Length = 330
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 127/296 (42%), Gaps = 23/296 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +++V + PL ++ +V ++D + C D+C HR A LS G++ +
Sbjct: 6 WYAVLDSREVKKNKPLFAKRLNKNLVFWRDKNNNICCIDDKCCHRGASLSHGKVCVDNIA 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG+QF+ GK V IP + ++ ++ V YEV++ G +W W K N DK+
Sbjct: 66 CPFHGFQFDKSGKTVIIPANGKNTEVNKNFFVSGYEVRDLYGFIWFWYGDKDKIN-DKIM 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKR----------- 296
+ ++ F S E ++ +EN +D H+ H T +
Sbjct: 125 FPDDLRDNKFSYSSIKDEWNNHYTRCIENQLDVVHVAFVHHNTIGRGNKTIVNGPLVESD 184
Query: 297 EDAQPLGFEVTERTDRGFAGQWGRE-KDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
ED+ L F V TD G E K FL F P Q N EK
Sbjct: 185 EDSNILKFYVNNVTDNGQKALNASEMKKEDFKYFLYFYFPNTWQ-------NYIFEKMRI 237
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTS-PWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
G+F P +++ +RF + P+IK ++ + + V +QD + +Q
Sbjct: 238 FGVFA--PVDDENTVIYMRFYQKILNIPFIKNIINFIGKKYSDIVLKQDKNVVKTQ 291
>gi|167902512|ref|ZP_02489717.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei NCTC 13177]
Length = 134
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|149921338|ref|ZP_01909792.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
gi|149817771|gb|EDM77235.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
Length = 360
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 98/181 (54%), Gaps = 8/181 (4%)
Query: 142 PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 201
P T+ + ++L + +G + +CPHR A LS G+ GR+ C YHGW F+ +G+C
Sbjct: 21 PFARTLLGRHVMLIRTREGVVGLGA-QCPHRHADLSTGEFGKGRIRCPYHGWSFDMQGRC 79
Query: 202 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVS 261
V++ P +++P++AC+ Y +E QG++WVW + P P + P FE +
Sbjct: 80 VEV---PGTSRVPKAACLPRYPARERQGMIWVWFGEGE-PTPSEPPSFEFSPSQRMRRQR 135
Query: 262 TIHEL-PYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTD-RGFAGQWG 319
T L + L+EN +DP HI +H RT ++ + L E+ +R+D GF G+ G
Sbjct: 136 TPPRLWEVSYVDLVENTLDPTHITATHART-LGSRWAEHVGLMTEIEQRSDGGGFVGRAG 194
Query: 320 R 320
+
Sbjct: 195 K 195
>gi|167823999|ref|ZP_02455470.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 9]
Length = 128
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|167738401|ref|ZP_02411175.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 14]
Length = 131
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|42524666|ref|NP_970046.1| oxidase-related protein [Bdellovibrio bacteriovorus HD100]
gi|39576876|emb|CAE78105.1| oxidase-related protein [Bdellovibrio bacteriovorus HD100]
Length = 346
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 33/324 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ + + + IV Y+D KG++ +D CPHR LS G++++ ++E
Sbjct: 10 WYVGIPSAELAVNKATARKILGEPIVFYRDSKGKVSAMRDICPHRGIPLSYGRVVNDQIE 69
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKI-PRSACVRTYEVKESQGVVWVWMSQK--TPPNPD 244
C YHGW+F+G G C +IP L D ++ P VR+Y V E+QG++WV++ K
Sbjct: 70 CPYHGWKFDGTGMCTEIPSLCPDQELNPNKIKVRSYPVHEAQGLIWVFVGDKDYDVSKAP 129
Query: 245 KLPWFENFARPGFQDVSTIHELP--YDHSILLENLMDPAHIPISH-------DRTDYSAK 295
+P + F +++ + P DH+++ LMDPAH P H ++T K
Sbjct: 130 AIPVMKAFPADVKPNLTYVVNFPCHVDHAVI--GLMDPAHGPYVHKSWFWRSEKTMLEKK 187
Query: 296 REDA-QPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHY 354
++ A GF++ + + + G+ + F PCV + E G +++
Sbjct: 188 KKFAPVNYGFQMVRHQPSKNSKAY-KILGGTPTTEITFTLPCVRVEHIE-----VGPRNF 241
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNE-- 412
+ L + + + PW+ L HQ + K QDM ++ Q +
Sbjct: 242 YSYTALTPVDENNTRVTQLAYWDI---PWLTLLKP-AIHQFSKKFLGQDMDAVTKQQDGL 297
Query: 413 ------VLLKEKVPTKELYFNLRS 430
+L+K+ + Y+ L++
Sbjct: 298 RYDPSLMLIKDADTQAKWYYALKT 321
>gi|302830776|ref|XP_002946954.1| hypothetical protein VOLCADRAFT_120385 [Volvox carteri f.
nagariensis]
gi|300267998|gb|EFJ52180.1| hypothetical protein VOLCADRAFT_120385 [Volvox carteri f.
nagariensis]
Length = 505
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 147 VFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL--IDGRLECLYHGWQFEGEGKCVKI 204
V +Q+V+++ +D CPHRLA LSEG+L RL C YHGW+F+ EG C K+
Sbjct: 2 VLGEQLVVWRHSLRGWVVQRDVCPHRLAPLSEGRLEAAGTRLACAYHGWEFDEEGSCTKV 61
Query: 205 PQLPADAKI-------PRSACVRTYEVKESQGVVWVWMSQ--------KTPPNPDKLPWF 249
PQL +D + PRS CV +Y E G++ VWM K P P L
Sbjct: 62 PQLSSDPRAAATACSSPRS-CVTSYPTLELDGLLLVWMDDSKEGRQQAKIAPKPKLL--- 117
Query: 250 ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTER 309
E+ A+P D +E+P D++ LE MDP+H H + + E++ P+ + +
Sbjct: 118 EDGAKP-ILDSWFANEMPVDYTYWLEQGMDPSHANFLHHGALF--RSENSLPMSAKSVKD 174
Query: 310 TD--RGFAGQWG--REKDGSMPNFLRFEAP 335
D GF + G +K G M F F P
Sbjct: 175 VDLAGGFMWEHGAYEKKQGDMRGFREFLPP 204
>gi|134277982|ref|ZP_01764697.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 305]
gi|134251632|gb|EBA51711.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 305]
Length = 332
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 233
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|300309801|ref|YP_003773893.1| phenylpropionate dioxygenase [Herbaspirillum seropedicae SmR1]
gi|300072586|gb|ADJ61985.1| phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Herbaspirillum seropedicae SmR1]
Length = 343
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L + P T+ +++V++ G QDRC HR A+LS+G + +G +
Sbjct: 13 WYALMPIAQL-RQGPQPFTLLGEKLVVWLKEDGAPAALQDRCCHRTARLSKGFVENGNIV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW F GEG CV++PQ AD +P ACV++Y KE G VWV + + P D +P
Sbjct: 72 CGYHGWTFNGEGACVRVPQ-NADGSVPAGACVKSYFCKERYGYVWVALEE---PLRD-IP 126
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
F PG++ + +E ++ ++EN D +H H T + +P +E+
Sbjct: 127 EFPEEGAPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRAT--FGLYDQPKPEKYEI 184
Query: 307 TERTDRGFAGQ 317
E TD GF +
Sbjct: 185 AE-TDYGFEAE 194
>gi|126453309|ref|YP_001066370.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1106a]
gi|242317153|ref|ZP_04816169.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|403518798|ref|YP_006652931.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
gi|126226951|gb|ABN90491.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106a]
gi|242140392|gb|EES26794.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|403074440|gb|AFR16020.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
Length = 332
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 233
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|167910762|ref|ZP_02497853.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 112]
Length = 133
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|167918794|ref|ZP_02505885.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei BCC215]
Length = 332
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 233
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|254179664|ref|ZP_04886263.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1655]
gi|184210204|gb|EDU07247.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1655]
Length = 332
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 233
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|426405189|ref|YP_007024160.1| oxidase-like protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861857|gb|AFY02893.1| oxidase-related protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 346
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 33/324 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ + + + IV Y+D KG++ +D CPHR LS G++++ ++E
Sbjct: 10 WYVGLPSAELAVNKATARKILGEPIVFYRDSKGKVSAMRDICPHRGIPLSYGRVVNDQIE 69
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKI-PRSACVRTYEVKESQGVVWVWMSQK--TPPNPD 244
C YHGW+F+G G C +IP L D ++ P VR+Y V E+QG++WV++ K
Sbjct: 70 CPYHGWKFDGTGMCTEIPSLCPDQELNPNKIKVRSYPVHEAQGLIWVFVGDKDYDVSKAP 129
Query: 245 KLPWFENFARPGFQDVSTIHELP--YDHSILLENLMDPAHIPISH-------DRTDYSAK 295
+P + F +++ + P DH+++ LMDPAH P H ++T K
Sbjct: 130 AIPVMKAFPADVKPNLTYVVNFPCHVDHAVI--GLMDPAHGPYVHKSWFWRSEKTMLEKK 187
Query: 296 REDA-QPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHY 354
++ A GF++ + + + G+ + F PCV + E G +++
Sbjct: 188 KKFAPVNYGFQMVRHQPSKNSKAY-KILGGTPTTEITFTLPCVRVEHIE-----VGPRNF 241
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNE-- 412
+ L + + + PW+ L HQ + K QDM ++ Q +
Sbjct: 242 YSYTALTPVDENNTRVTQLAYWDI---PWLTLLKP-AIHQFSKKFLGQDMDAVTKQQDGL 297
Query: 413 ------VLLKEKVPTKELYFNLRS 430
+L+K+ + Y+ L++
Sbjct: 298 RYDPSLMLIKDADTQAKWYYALKT 321
>gi|76809319|ref|YP_333639.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1710b]
gi|126438758|ref|YP_001059085.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 668]
gi|226197307|ref|ZP_03792884.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|254197515|ref|ZP_04903937.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
gi|254259439|ref|ZP_04950493.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1710a]
gi|418385122|ref|ZP_12967027.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 354a]
gi|418540796|ref|ZP_13106312.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1258a]
gi|418547038|ref|ZP_13112216.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1258b]
gi|418553254|ref|ZP_13118087.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 354e]
gi|76578772|gb|ABA48247.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei 1710b]
gi|126218251|gb|ABN81757.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 668]
gi|169654256|gb|EDS86949.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
gi|225930686|gb|EEH26696.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|254218128|gb|EET07512.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1710a]
gi|385360380|gb|EIF66313.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1258a]
gi|385362282|gb|EIF68106.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1258b]
gi|385371926|gb|EIF77070.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 354e]
gi|385376682|gb|EIF81331.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 354a]
Length = 332
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 233
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|67640966|ref|ZP_00439755.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei GB8 horse 4]
gi|254178622|ref|ZP_04885277.1| conserved domain protein [Burkholderia mallei ATCC 10399]
gi|254199663|ref|ZP_04906029.1| conserved domain protein [Burkholderia mallei FMH]
gi|254205981|ref|ZP_04912333.1| conserved domain protein [Burkholderia mallei JHU]
gi|254358620|ref|ZP_04974893.1| conserved domain protein [Burkholderia mallei 2002721280]
gi|147749259|gb|EDK56333.1| conserved domain protein [Burkholderia mallei FMH]
gi|147753424|gb|EDK60489.1| conserved domain protein [Burkholderia mallei JHU]
gi|148027747|gb|EDK85768.1| conserved domain protein [Burkholderia mallei 2002721280]
gi|160699661|gb|EDP89631.1| conserved domain protein [Burkholderia mallei ATCC 10399]
gi|238521795|gb|EEP85244.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei GB8 horse 4]
Length = 332
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 233
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|347528238|ref|YP_004834985.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136919|dbj|BAK66528.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 359
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++ D PL T+ DQ+I+L++ G G DRCPHR A LS G++I ++
Sbjct: 9 WYAAAFADEI-SDKPLARTLLDQEIMLFRKGDGTAAMLADRCPHRFAPLSGGKVIGDEIQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F +G+C P + + ++A + + V E G++W W P LP
Sbjct: 68 CPYHGLRFNAQGECTHNPHVKGGGAL-KAANITAWPVMEKYGILWFWPGNPDLAEPSALP 126
Query: 248 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSA 294
E RP F V + + ++ ++++NL+D +H H + SA
Sbjct: 127 RVEFLERPDAFSVVKGLLHVKGNYELVVDNLLDLSHASYIHPQFGGSA 174
>gi|424904520|ref|ZP_18328030.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis MSMB43]
gi|390930498|gb|EIP87900.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis MSMB43]
Length = 336
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D W PL L++ V APLG+ Q +VLY+D G R +DRC HR A LS G++
Sbjct: 11 DSAARWLPLALSEQVSARAPLGVVCMGQPLVLYRDASGAARAMEDRCAHRRAPLSLGRVT 70
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
DGRL+C YHGW ++G G CV IP L +P VR YE E G VW
Sbjct: 71 PDGRLQCGYHGWIYDGASGACVAIPNLSQGEPVPPHYAVRAYETFERDGYVW 122
>gi|124266194|ref|YP_001020198.1| vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
gi|124258969|gb|ABM93963.1| putative vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
Length = 349
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
T WY L+ +V A + D I++Y+ G DRCPHR A L G+ I
Sbjct: 9 TNAWYVAALSTEVGAQALFHRKILDTSILIYRKQDGTAVALHDRCPHRFAPLHLGKRIGD 68
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
+ CLYH QF+ G+C K P + +IP++A VR++ ++E G +W+WM + P+
Sbjct: 69 EVACLYHALQFDCTGQCTKNPH--GNGQIPKAAKVRSFPLEERYGFLWIWMGEDA-PDLA 125
Query: 245 KLPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
+LP F + P T + ++ ++++N+MD +H I H + R PL
Sbjct: 126 RLPDFGELDKGPDTGVAFTYMHMKANYELIIDNVMDLSH--IDHVHGEIITTRGQLSPLV 183
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRF 332
++ E ++ + +W ++ +M F F
Sbjct: 184 PQMRE-GEQAISARWEWQQTPAMLIFANF 211
>gi|213385128|dbj|BAG84256.1| putative oxygenase [Streptomyces griseoviridis]
Length = 381
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 75/118 (63%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + L+ DV + P + +V+++D +G++ C Q RCPH+ A L++G+++ +
Sbjct: 5 QWYAILLSGDVKKNKPHKTRRMGENLVVWRDIEGKVVCQQARCPHKGANLADGRVMGNSV 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
EC YHG++F+ G+CV +P L +A+IP S V++Y V+E G++W+W + PD
Sbjct: 65 ECPYHGFRFDPSGQCVAVPCLGTEARIPPSMRVKSYPVREHLGLIWMWWGEDREVLPD 122
>gi|78061637|ref|YP_371545.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
gi|77969522|gb|ABB10901.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
Length = 351
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 80/141 (56%), Gaps = 10/141 (7%)
Query: 123 DW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
DW + W+P+ +V D PL +T+ D++IVL++ G G + +D CPHR A LS G
Sbjct: 27 DWEILSRYWHPVAFATEV-GDRPLAVTLLDERIVLFRSG-GAIVAARDVCPHRGAPLSRG 84
Query: 180 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
+++ RL C YHG ++ +GKCV+IP P D IP C+ TY +++ G+VWV +
Sbjct: 85 WVVEDRLVCPYHGLEYAADGKCVRIPSQP-DGPIPERLCLTTYAAQQAYGLVWVSLGGGE 143
Query: 240 PPNPDKLPWFENFARPGFQDV 260
P PD W GFQ +
Sbjct: 144 LPLPDFPAWNAE----GFQQI 160
>gi|83719903|ref|YP_442852.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis E264]
gi|167621297|ref|ZP_02389928.1| Rieske [Burkholderia thailandensis Bt4]
gi|257139068|ref|ZP_05587330.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis E264]
gi|83653728|gb|ABC37791.1| Rieske [2Fe-2S] domain protein [Burkholderia thailandensis E264]
Length = 326
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D W PL L++ V APL + Q IVL++D G R +DRC HR A LS G++
Sbjct: 10 DSAARWLPLALSEQVSGKAPLAVMCMGQPIVLFRDAAGAARAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
+GRL+C YHGW ++G G CV IP L D ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGACVAIPNLSHDERVPAHYAARAYETFERDGYVW 121
>gi|339321988|ref|YP_004680882.1| ring-hydroxylating dioxygenase [Cupriavidus necator N-1]
gi|338168596|gb|AEI79650.1| ring-hydroxylating dioxygenase [Cupriavidus necator N-1]
Length = 353
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T Q IVL++DG+G++ +DRCPHR A+LS G + R+
Sbjct: 21 WYPVAASWAV-SHAPIGITRLSQNIVLWRDGEGQVHALEDRCPHRGARLSMGWNLGDRVA 79
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP---NPD 244
C YHG + G+G+ +P + + + CVR+Y V+E G +++W + P +PD
Sbjct: 80 CWYHGVEVGGDGQVKSVPAVES-CPLEGRTCVRSYPVQEKAGAIFLWFGDQAPQGEGSPD 138
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
+L E + + ++ ++N+MDP H H + A E + +
Sbjct: 139 ELRLPEELVSEEHSNFLCVAHWDCNYRYAIDNVMDPMHGAYLHAVSHSMASGEKSAVMQV 198
Query: 305 EVTE 308
TE
Sbjct: 199 RETE 202
>gi|116694681|ref|YP_728892.1| ring-hydroxylating dioxygenase [Ralstonia eutropha H16]
gi|113529180|emb|CAJ95527.1| Ring-hydroxylating dioxygenase [Ralstonia eutropha H16]
Length = 353
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T Q IVL++DG+G++ +DRCPHR A+LS G + R+
Sbjct: 21 WYPVAASWAV-SHAPIGITRLSQNIVLWRDGEGQVHALEDRCPHRGARLSMGWNLGDRVA 79
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP---NPD 244
C YHG + G+G+ +P + + + CVR+Y V+E G +++W + P +PD
Sbjct: 80 CWYHGVEVGGDGQVKSVPAVES-CPLEGRTCVRSYPVQEKAGAIFLWFGDQAPQGEGSPD 138
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
+L E + + ++ ++N+MDP H H + A E + +
Sbjct: 139 ELRLPEELVSEEHSNFLCVAHWDCNYRYAIDNVMDPMHGAYLHAVSHSMASGEKSAVMQV 198
Query: 305 EVTE 308
TE
Sbjct: 199 RETE 202
>gi|307155301|ref|YP_003890685.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306985529|gb|ADN17410.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 337
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ ++ + + V+ Q I +Y+D KG+L ++ CPH+ L +G++ + L
Sbjct: 26 WYPVAWAYNLKPTQIIPVVVWQQAIAVYRDSKGQLHALENACPHKGVVLDKGEVRENILV 85
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F EG+C+KIP LP + K+P A R+Y V+E G++WV+ + LP
Sbjct: 86 CPYHGWEFNPEGECIKIPYLPPEQKLP-CAKARSYPVQEKYGIIWVFPGDASLATQQSLP 144
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
+ P + V SI EN MD H
Sbjct: 145 DLPEYNDPDWIIVEIPAHFKAHFSICNENTMDVFH 179
>gi|374366267|ref|ZP_09624348.1| oxidoreductase, rieske (2fe-2S) region [Cupriavidus basilensis
OR16]
gi|373102051|gb|EHP43091.1| oxidoreductase, rieske (2fe-2S) region [Cupriavidus basilensis
OR16]
Length = 353
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 109 SEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDR 168
S +++R E R+ + WYP+ V AP+G+T Q IVL++DG+G++ +DR
Sbjct: 3 SNKQARAEARL-NTGLHNYWYPVSAAWAVTH-APIGITRLGQNIVLWRDGEGQVHALEDR 60
Query: 169 CPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQ 228
CPHR A+LS G + R+ C YHG + G+G+ +P + + + CVR+Y V+E
Sbjct: 61 CPHRGARLSMGWNLGDRVACWYHGVEVGGDGQVKSVPAVDS-CPLEGKTCVRSYPVQEKA 119
Query: 229 GVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH- 287
G +++W ++ D L E D + ++ ++N+MDP H H
Sbjct: 120 GAIFLWFGERALAEADALRLPEELESDEHTDFLCVAHWDCNYRYAIDNVMDPMHGAYLHA 179
Query: 288 --------DRTDYSAKREDAQPLGFEVTERTDRGFAGQW 318
++ A RE L FE T + RG W
Sbjct: 180 VSHSMAAGEKQAVMAVRETDTGLVFEKTGQ--RGVNFDW 216
>gi|374366506|ref|ZP_09624585.1| Rieske 2Fe-2S family protein [Cupriavidus basilensis OR16]
gi|373101976|gb|EHP43018.1| Rieske 2Fe-2S family protein [Cupriavidus basilensis OR16]
Length = 472
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID-GRL 186
WY L + + DD P T+ + +VL++ G+ QDRC HR A+LS+G + + G +
Sbjct: 6 WYAL-MPISMLDDGPKPFTLLGENLVLWRRADGKPAALQDRCCHRTARLSKGWVNERGDI 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ G CV+IPQ P D IP A V+ Y V+E G VWV + P PD
Sbjct: 65 VCGYHGWEYNCSGNCVRIPQAP-DNAIPSGAKVQAYHVQEKYGYVWVALDDPLQPIPD-- 121
Query: 247 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
F PG++ + +E S+ ++EN D +H H R ++ E +P ++
Sbjct: 122 --FPEDGDPGYRRIFQFYEKWNTSSLRVMENAFDNSHFSFVH-RANFGLS-EQPKPEKYD 177
Query: 306 VTERTDRGFAGQWGREKDGSMP 327
+ +R +WG E + +P
Sbjct: 178 LQQR-------EWGFEAETLVP 192
>gi|383786720|ref|YP_005471289.1| ring-hydroxylating dioxygenase, large terminal subunit
[Fervidobacterium pennivorans DSM 9078]
gi|383109567|gb|AFG35170.1| ring-hydroxylating dioxygenase, large terminal subunit
[Fervidobacterium pennivorans DSM 9078]
Length = 327
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 40/337 (11%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG-- 184
+WY + + ++ +GLT F +++ +++D KG++ C D C HR A LS G+L+
Sbjct: 5 QWYVVLSSSELKKGQLIGLTRFGEKLAMWRDEKGDVHCISDICCHRGASLSHGKLLANGE 64
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP- 243
RL C +HG++++ GK IP A +P + V++Y+ E +W+W PP+P
Sbjct: 65 RLMCPFHGFEYDPTGKVQAIPSNGRTAPVPENFKVKSYKTYELADFIWIWYGDNDPPSPP 124
Query: 244 ---DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
D + ++ F ++ +H +S +EN +DP H+P H T R A
Sbjct: 125 SYFDDID--DSLVYSQFSEIWNVH-----YSRAIENQLDPIHVPFVHYNTIGRGNRTVAD 177
Query: 301 P----------LGFEVTERTDRGFAGQWGREKDGSMPN--FLRFEAPCVLQNNRESVDNK 348
F V R D G + E + S + +L F+ P + QN+
Sbjct: 178 GPIVKWINDTMFYFYVFNRVDDGTPARKPEEMEISEMSKVYLEFKFPNIWQNH------- 230
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTS-PWIKLFPDWYFHQSASKVFEQDMGFL 407
EK T F+ P +++ +RF T +I KV QD +
Sbjct: 231 IHEKLRVTAAFV--PIDDEHTLIYLRFYVGFTKIKFIDKLISLLGMPFNRKVLHQDKAVV 288
Query: 408 SSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+Q + K ++ E NL + D + EYRK +K
Sbjct: 289 ETQ--IPKKSELKMSE---NLINGDLPILEYRKKREK 320
>gi|384209589|ref|YP_005595309.1| Rieske (2Fe-2S) domain-containing protein [Brachyspira intermedia
PWS/A]
gi|343387239|gb|AEM22729.1| Rieske (2Fe-2S) domain protein [Brachyspira intermedia PWS/A]
Length = 327
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +K+V + PL ++ +V ++D + C D+C HR A LS G++ +
Sbjct: 6 WYAVLDSKEVKRNKPLFAKRLNKNLVFWRDSNNNICCIDDKCCHRGASLSHGKICGNNIA 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG+QF+ GK V IP + ++ ++ V YEV+E G +W+W K N D++
Sbjct: 66 CPFHGFQFDKTGKTVMIPANGKNTEVNKNFFVEGYEVRELYGFIWLWYGDKDKIN-DRIM 124
Query: 248 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDYSAKR---------- 296
+ ++ F STI + ++H + +EN +D HI H T +
Sbjct: 125 FPDDLKDKKFS-YSTIKDEWHNHYTRCIENQLDVVHIAFVHYNTIGRGNKTVVNGPLVEL 183
Query: 297 -EDAQPLGFEVTERTDRGFAGQWGRE-KDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHY 354
ED L F V D G E K FL F P Q N EK
Sbjct: 184 DEDNNILKFYVNNVIDSGQKALRESEMKKEDFKYFLYFYFPNTWQ-------NYIFEKMR 236
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTS-PWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
G+F P +++ +RF + P+I+ + + + V +QD + +Q
Sbjct: 237 VFGVFA--PVDDENTVIYMRFYQKIVNIPFIRSIVNLIGKKYSDIVLKQDKNVVKTQ 291
>gi|254512627|ref|ZP_05124693.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium KLH11]
gi|221532626|gb|EEE35621.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium KLH11]
Length = 349
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 10/188 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +KD+ A T D+ IVLY+ G +D CPHR LS+G L +E
Sbjct: 7 WYVAAWSKDI-GRALKAETFLDENIVLYRQEDGTPVALEDACPHRKLPLSKGNLKGDLVE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ GKC+ P PR A VR+Y V + ++W+WM +PDK+
Sbjct: 66 CGYHGLTFDCSGKCIDSPT--QRGMTPRRAVVRSYPVVDRYRLLWIWMGDPELADPDKIF 123
Query: 248 WFENFARP--GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
ENF P G D + ++ + + +NL+DP+H+ H + ++ D +PL
Sbjct: 124 PIENFDNPGWGLTDGGAM-DIDCHYLWVCDNLLDPSHVAWVH-VSSFAGAGTDEEPLN-- 179
Query: 306 VTERTDRG 313
E+TDRG
Sbjct: 180 -VEKTDRG 186
>gi|384251621|gb|EIE25098.1| hypothetical protein COCSUDRAFT_46585 [Coccomyxa subellipsoidea
C-169]
Length = 1215
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 159/411 (38%), Gaps = 86/411 (20%)
Query: 183 DGRLECLYHGWQFEGEGKCVKIPQL------PADAKIPRSACVRTYEVKESQGVVWVW-- 234
DG L C YHGW+F GEGKC IPQ A PRS C + K QG+V+VW
Sbjct: 796 DGTLMCSYHGWRFSGEGKCTDIPQSLDPKANAAACSNPRS-CAISRPTKVLQGMVFVWGH 854
Query: 235 ---------MSQKTPPNPDKLPWFENFARPGFQDVSTI-------HELPYDHSILLENLM 278
+ P PD + E+ Q V T+ ELPY +L ENL
Sbjct: 855 SSSNAAAEAEAMPVPGVPD-MAMTEDIPSSTSQGVPTLAFLPDYYRELPYGWEVLAENLQ 913
Query: 279 DPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRG---------FAGQWGREKDGSMPN- 328
DP+H+P +H +R+D + + + R + AG+ R + G +
Sbjct: 914 DPSHLPFAH--HGVLNRRDDEKAGYYRMDSRRPKDSSSGQDVICVAGESIRPRLGDLQGR 971
Query: 329 FLRFEAPCVLQ---NNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVR--FGTTGTS-- 381
+F+ P +++ R+ D E + +F P GKS ++ F G
Sbjct: 972 AFQFDPPSLIRWYTYQRDQGDIDKHESWINMNVFYVIPVAPGKSAVLFSGFFTAHGAKKM 1031
Query: 382 PWI-----KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKEL-----YFNLRSI 431
P I K P W H VF+ D L Q E LL E E Y+
Sbjct: 1032 PLIPQLIFKFRPRWESHCFTHLVFDGDSKILHMQ-ERLLAETSRNGESSWRKNYYMPAQA 1090
Query: 432 DTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTM 491
D VA +RKW+D+ G G P P L S LP M
Sbjct: 1091 DRLVAAFRKWLDERGGGGP--------------------PTRL----SGQLPPLDDRQEM 1126
Query: 492 HAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAA--LLTALAILGAG 540
+ +R+ +H HC C AVKAF + + A LL + LG G
Sbjct: 1127 YL----DRFNQHTRHCPSCMGAVKAFERLRVAAVAAGVIFLLGLSSALGRG 1173
>gi|416956292|ref|ZP_11935878.1| Rieske (2Fe-2S) protein [Burkholderia sp. TJI49]
gi|325522614|gb|EGD01145.1| Rieske (2Fe-2S) protein [Burkholderia sp. TJI49]
Length = 356
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V +AP+GLT +QIVL++D G++ +DRCPHR A+LS G + G L
Sbjct: 26 WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGGNLA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G K+P + A+ + + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGIEVDGSGTVNKVPAV-ANCPLEGTRCVKSYPVEEKAGAIFLWFGDEAHAEPAPLN 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPEELVADEYAHFLCVSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|421746659|ref|ZP_16184441.1| oxidoreductase, rieske (2fe-2S) region [Cupriavidus necator HPC(L)]
gi|409774804|gb|EKN56371.1| oxidoreductase, rieske (2fe-2S) region [Cupriavidus necator HPC(L)]
Length = 356
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T Q IVL++DG G++ +DRCPHR A+LS G + R+
Sbjct: 21 WYPVAASWSVTH-APIGITRLSQNIVLWRDGAGQVHALEDRCPHRGARLSMGWNLGDRVA 79
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP----PNP 243
C YHG + G+G+ +P + + + CVR+Y V+E G +++W ++ P +
Sbjct: 80 CWYHGVEVGGDGQVKSVPAVES-CPLEGKTCVRSYPVQEKAGAIFLWFGERAPLDGADST 138
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDYSA 294
D L E P + ++ ++N+MDP H H ++ A
Sbjct: 139 DALRLPEELENPEHSHFLCVAHWDCNYRYAIDNVMDPMHGAYLHAVSHSMASGEKQAVMA 198
Query: 295 KREDAQPLGFEVTERTDRGFAGQW 318
RE L FE T RG W
Sbjct: 199 VRETEHGLMFEKT--GQRGVNFDW 220
>gi|346993484|ref|ZP_08861556.1| Rieske (2Fe-2S) protein [Ruegeria sp. TW15]
Length = 349
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 141/343 (41%), Gaps = 40/343 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +KD+ + T + +VLY+ G +D CPHR LS+G LI +E
Sbjct: 7 WYVAAWSKDIGRELK-AETYLGENVVLYRQQDGTPVALEDACPHRKLPLSKGNLIGDTVE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ GKC P PR A V++Y V + ++W+WM NPD +
Sbjct: 66 CGYHGLTFDCSGKCTDSPT--QRGMTPRRAVVKSYPVVDRYRLLWIWMGDPELANPDLIF 123
Query: 248 WFENFARP--GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
ENF P G D + ++ + + +NL+DP+H+ H + ++ D +PL
Sbjct: 124 PIENFDNPTWGMTD-GGVMDIDCHYLWVCDNLLDPSHVAWVH-VSSFAGAGTDEEPLN-- 179
Query: 306 VTERTDRG-FAGQWGREKDGS--MPNFLRFEAPCVLQNNRESV-----DNKTGEKHYSTG 357
E+TDRG +W K S + FE C + E NK+ TG
Sbjct: 180 -VEKTDRGVIVSRWIENKPPSPYYSKLVAFEGECDRLQHYEMCLPAIGLNKSIYTPVGTG 238
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS---------------ASKVFEQ 402
+ P Q + F T + F W+ H++ A F +
Sbjct: 239 GYDIDPVEQTFINISYNFMTPINEDETRYF--WFQHRNSDPDNAEVSKFMNDGARMAFIE 296
Query: 403 DMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKA 445
D L ++ + K P +L +D YR+ +D+A
Sbjct: 297 DKEVLEEVHKGMKNAKTPHIDL-----GLDAGAKIYRRVLDRA 334
>gi|337745128|ref|YP_004639290.1| Rieske (2Fe-2S) domain-containing protein [Paenibacillus
mucilaginosus KNP414]
gi|336296317|gb|AEI39420.1| Rieske (2Fe-2S) domain protein [Paenibacillus mucilaginosus KNP414]
Length = 332
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 148/349 (42%), Gaps = 66/349 (18%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
EW+P+ + ++ +D PL +TV +++ +++ +G + +D C HR A LS+G + L
Sbjct: 15 EWHPVCIAGEL-NDKPLSVTVLGERVAVFRTKRG-VHALRDLCVHRGAMLSKGWVEGETL 72
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++EG G CV IP + KIP A Y E G+VWV + + + P PD
Sbjct: 73 VCPYHGWKYEGNGACVCIPAQSKEDKIPARARAEQYRCMEKYGLVWVCIGEPSAPLPD-- 130
Query: 247 PWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISH----DRTDYSAKREDAQP 301
FE F PG++ + +++ + ++EN D AH+ H DY A+
Sbjct: 131 --FEEFENPGYRPLPCGPYQVKAAGTRVIENFTDFAHLMFVHGGLLGHPDY------AEL 182
Query: 302 LGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKH-YSTGLFL 360
F+V + DR + G + P + K G + Y +F
Sbjct: 183 PDFKVYKEKDRVYTG----------------DVPIFQPVAHSGSEAKEGTTYVYVKEVF- 225
Query: 361 CRPTGQGKSMLIVRFGTTGTSPWIKL-----------------------FPDWYFHQSAS 397
RP + L R TG + WI L D F + +
Sbjct: 226 -RPLA---ARLSKRDAATGQTLWILLTVLPVTEKECTVYMAVSRNYGFDVDDRQFIEFQN 281
Query: 398 KVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAG 446
VFEQD + +Q LL + + N ++ D YR+W+ + G
Sbjct: 282 TVFEQDAWIIETQKPELLPLDLQAE---LNHKA-DVLSVAYRRWLIELG 326
>gi|434391889|ref|YP_007126836.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
gi|428263730|gb|AFZ29676.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
Length = 349
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 136/322 (42%), Gaps = 27/322 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + A + T+ + IV + +G++ + CPHR LS G+ +E
Sbjct: 11 WYYALPGGSLKRGAMVAKTLLGEPIVFARSREGKVFALCNICPHRAVPLSCGRFDGQEIE 70
Query: 188 CLYHGWQFEGEGKCVKIPQL-PADAKIPRSACVRTYEVKESQGVVWVWMS---QKTPPNP 243
C YHGW+F+ G+C +IP L D+ + V+ Y V+E QG +W++M+ +K PP
Sbjct: 71 CCYHGWRFDQTGRCTEIPALVEGDSLDLKRFQVKQYPVREVQGNIWIYMASNERKAPPAT 130
Query: 244 D-KLPWFENFARPGFQDVSTIHELPY-DHSILLENLMDPAHIPISHDRTDYSAKRE---- 297
D ++P F +Q V T+H Y DH+I+ LMDPAHI H + + R
Sbjct: 131 DMEVPVVPFFGDKSYQLVVTLHFPCYVDHAII--GLMDPAHISFVHRSWWWKSGRSLFEE 188
Query: 298 ----DAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKH 353
D P GF + A + G+ + F P V +++ + E H
Sbjct: 189 VKAFDPSPYGFTMRRHKIPNVALGYRLIGGGAPETEIAFRLPGV------RIEHVSTEHH 242
Query: 354 YSTGLFLCRPTGQGKSMLIVRF-----GTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLS 408
L P + ++ + T P IK F + Q V +Q G
Sbjct: 243 NVCNLTAVTPLSETETEVTTLLYWTTPWITAIKPLIKPFVRAFLDQDRQVVIKQQEGLKY 302
Query: 409 SQNEVLLKEKVPTKELYFNLRS 430
+L+++ Y+ L++
Sbjct: 303 DPTLLLIRDADTQARWYYQLKA 324
>gi|402814201|ref|ZP_10863795.1| putative phenylpropionate dioxygenase [Paenibacillus alvei DSM 29]
gi|402508048|gb|EJW18569.1| putative phenylpropionate dioxygenase [Paenibacillus alvei DSM 29]
Length = 325
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 17/176 (9%)
Query: 119 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSE 178
V D EW +DV + PL + + +++VL+++ +G + +D C HR A LS
Sbjct: 3 VNDAVLRNEWIVACRAQDV-QEKPLQVLIMGERVVLFRNEEG-VHAFKDLCVHRGAALSL 60
Query: 179 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK 238
G + DG+L C YH W+FEG G C +IPQLPA+ IP+ A TY +E G +WV +
Sbjct: 61 GCVKDGKLVCPYHAWEFEGSGACSRIPQLPAEQAIPKKAHAITYGCEERYGFIWVNLG-- 118
Query: 239 TPPNPDKLPW--FENFARPGFQDV----STIHELPYDHSILLENLMDPAHIPISHD 288
N D +PW FE F G+++V ++ P ++EN +D H+ + H+
Sbjct: 119 ---NAD-IPWFPFEEFGAEGWRNVIWGPQSVGAKP---PRIVENFLDVGHLAVVHE 167
>gi|206971423|ref|ZP_03232373.1| 2Fe-2S domain protein [Bacillus cereus AH1134]
gi|229178848|ref|ZP_04306208.1| hypothetical protein bcere0005_22040 [Bacillus cereus 172560W]
gi|365160845|ref|ZP_09357002.1| hypothetical protein HMPREF1014_02465 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423413757|ref|ZP_17390877.1| hypothetical protein IE1_03061 [Bacillus cereus BAG3O-2]
gi|423430459|ref|ZP_17407463.1| hypothetical protein IE7_02275 [Bacillus cereus BAG4O-1]
gi|206733408|gb|EDZ50580.1| 2Fe-2S domain protein [Bacillus cereus AH1134]
gi|228604613|gb|EEK62074.1| hypothetical protein bcere0005_22040 [Bacillus cereus 172560W]
gi|363622286|gb|EHL73455.1| hypothetical protein HMPREF1014_02465 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401100089|gb|EJQ08087.1| hypothetical protein IE1_03061 [Bacillus cereus BAG3O-2]
gi|401119386|gb|EJQ27201.1| hypothetical protein IE7_02275 [Bacillus cereus BAG4O-1]
Length = 315
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 28/224 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + KD+ P+ V + VLY+D KGE++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYVKDI-KKIPVKKRVAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 246
C YHGW+F+ G CV+IP P + IP+ A +Y VKE G++W++ S++ PP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFAHTFSYPVKEKIGLIWIYPDSEENPPEWQTF 130
Query: 247 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
EN F F H + +E+++D AH+ H +T ++ A+ +
Sbjct: 131 HVMENTPFKLSFFHATWNAHL-----TRSIESVLDIAHLAYVHKKT--IGRKTKAESTNY 183
Query: 305 EVTERTDR------------GFAGQW----GREKDGSMPNFLRF 332
++ D+ F QW G++++ S ++ F
Sbjct: 184 KLEGTLDQFIFSNGDAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|126731895|ref|ZP_01747699.1| Rieske (2Fe-2S) protein [Sagittula stellata E-37]
gi|126707722|gb|EBA06784.1| Rieske (2Fe-2S) protein [Sagittula stellata E-37]
Length = 356
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ DD T+ +V+Y+ G + +DRCPHRL LS+G+ + ++
Sbjct: 9 WYVAAWSTEIDDDL-RRFTILGDHVVMYRKSDGGVVALEDRCPHRLLPLSKGKRVGDNVQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ G CV++ P +P+SA V + +E G+VW+WM + K+
Sbjct: 68 CGYHGLTFDCSGACVRV---PGQTNLPKSAYVEAFPTEERHGIVWIWMGDAARADTSKIF 124
Query: 248 WFENFARPGFQ--DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDA 299
F PG++ +H L ++ + ENL+DPAH+ H T +A E+
Sbjct: 125 DMPEFTDPGWKVHHGDALH-LRSNYLNVAENLVDPAHVSFVHPTTLGNAASENV 177
>gi|194291340|ref|YP_002007247.1| oxidoreductase, rieske (2fe-2S) region [Cupriavidus taiwanensis LMG
19424]
gi|193225244|emb|CAQ71186.1| putative oxidoreductase, putative Rieske (2Fe-2S) region
[Cupriavidus taiwanensis LMG 19424]
Length = 353
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 6/203 (2%)
Query: 109 SEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDR 168
S +++R E R+ + WYP+ + V AP+G+T Q IVL++DG G++ +DR
Sbjct: 3 SNKQARAEARL-NTGLRNYWYPVAASWAVTH-APIGITRLSQNIVLWRDGAGQVHALEDR 60
Query: 169 CPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQ 228
CPHR A+LS G + R+ C YHG + G+G+ +P + + + CVR+Y V+E
Sbjct: 61 CPHRGARLSMGWNLGDRVACWYHGVEVGGDGQVKSVPAVES-CPLEGRTCVRSYPVQEQA 119
Query: 229 GVVWVWMSQKTPP---NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 285
G +++W + P +PD+L E + ++ ++N+MDP H
Sbjct: 120 GAIFLWFGDQAPQGEGSPDELRLPEELVSEEHSHFLCVAHWDCNYRYAIDNVMDPMHGAY 179
Query: 286 SHDRTDYSAKREDAQPLGFEVTE 308
H + A E + + TE
Sbjct: 180 LHAVSHSMASGEKSAVMQIRETE 202
>gi|213385123|dbj|BAG84251.1| putative oxygenase [Streptomyces griseoviridis]
Length = 442
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WYP+ ++DV + P G +++V+++D +G + RCPH+ A L G++ L
Sbjct: 5 QWYPVARSRDVKQNKPKGAMRLGEEVVMWRDARGNAVVQEARCPHKGANLGAGRINQNAL 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-K 245
EC YHG++F G C +P L ++A+IP+ +R Y V+E +VW+W ++ P+
Sbjct: 65 ECPYHGFRFGAGGDCEAVPCLGSEARIPKGLRIRNYPVREEHDMVWMWWGEERESYPEID 124
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+P R V+ + P ++ +E++++ H P H
Sbjct: 125 IP--PEVTRWKGVHVTGSWQQPVHYTRYIESMLEFYHAPFVH 164
>gi|152979928|ref|YP_001352913.1| vanillate monooxygenase subunit alpha [Janthinobacterium sp.
Marseille]
gi|151280005|gb|ABR88415.1| vanillate monooxygenase, alpha subunit [Janthinobacterium sp.
Marseille]
Length = 358
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 19/197 (9%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
W++E YLT+ + + +++Y+ G DRCPH+LA LS G+L
Sbjct: 14 WSKEVGRQYLTR----------RILGEPVLMYRKEDGSPVALLDRCPHKLAPLSLGELKG 63
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
+EC YHG QF+ G CV++P P +IP +A V+++ + E VW+WM + T NP
Sbjct: 64 DIVECGYHGLQFDCSGTCVRVPGQP---QIPPTAQVKSFPLVERYNAVWIWMGEATLANP 120
Query: 244 DKLPWFENFARPGFQ--DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
D + E + PG+ D +H ++ + +NL+DPAH H T +A E+
Sbjct: 121 DDIVEVERYQMPGWDLIDGQYLH-FKSNYLNITDNLVDPAHTTYVHKNTIGNAAGEN--- 176
Query: 302 LGFEVTERTDRGFAGQW 318
+ +V + + A +W
Sbjct: 177 VAVKVEQGDNHVLAYRW 193
>gi|379718706|ref|YP_005310837.1| Rieske domain-containing protein [Paenibacillus mucilaginosus 3016]
gi|378567378|gb|AFC27688.1| Rieske domain-containing protein [Paenibacillus mucilaginosus 3016]
Length = 332
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 150/345 (43%), Gaps = 58/345 (16%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
EW+P+ + ++ +D PL +TV +++ +++ +G + +D C HR A LS+G + L
Sbjct: 15 EWHPVCIAGEL-NDKPLSVTVLGERVAVFRTKRG-VHALRDLCVHRGAMLSKGWVEGETL 72
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++EG G CV IP + KIP A Y E G+VWV + + + P PD
Sbjct: 73 VCPYHGWKYEGNGACVCIPAQSKEDKIPARARAEQYRCMEKYGLVWVCIGEPSAPLPD-- 130
Query: 247 PWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF- 304
FE F PG++ + +++ + ++EN D AH+ H LG
Sbjct: 131 --FEEFENPGYRPLPCGPYQVKAAGTRVIENFTDFAHLMFVH-----------GGLLGHP 177
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPT 364
+ E D + GR G +P F P V + E+ + T Y +F RP
Sbjct: 178 DYAELPDFKVYKEKGRVYTGDVPIF----QP-VAHSGSEAKEGTT--YVYVKEVF--RPL 228
Query: 365 GQGKSMLIVRFGTTGTSPWIKL-----------------------FPDWYFHQSASKVFE 401
+ L R TG + WI L D F + + VFE
Sbjct: 229 A---ARLSKRDAATGQTLWILLTVLPVTEKECTVYMAVSRNYGFDVDDRQFIEFQNTVFE 285
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAG 446
QD+ + +Q LL + + N ++ D YR+W+ + G
Sbjct: 286 QDVWIIETQKPELLPLDLQAE---LNHKA-DVLSVAYRRWLIELG 326
>gi|434384793|ref|YP_007095404.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428015783|gb|AFY91877.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 333
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 11/183 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ T D+ +P T+ Q+IVL+ D +G+ +DRC HR A+LS G++++G +
Sbjct: 13 WYPVIPTADLLG-SPQPFTLLGQKIVLWLDAEGKPAAAKDRCCHRSAQLSLGKVVNGAIA 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF+ G+CV +PQL D IP +A + TY E G WV + + P
Sbjct: 72 CPYHGWQFDSSGRCVCVPQL-KDVGIPAAARIETYRCTEKYGYAWVCLDEPIAEIPHIAE 130
Query: 248 WFENFAR--PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
FE+ R P F + L ++EN +D AH H T + P E
Sbjct: 131 AFESDFRLIPEFYETWKCAGLR-----VMENELDLAHPTFVHTTT--FGSEDHPTPDRLE 183
Query: 306 VTE 308
+TE
Sbjct: 184 ITE 186
>gi|220906615|ref|YP_002481926.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219863226|gb|ACL43565.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 364
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 142 PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 201
P + + D ++VLY++ + +L +D+C HR A LS G + L C YHGW+FE G C
Sbjct: 32 PKAVKLMDHRVVLYRNAQEQLVALKDQCAHRGAALSAGWVEGNCLRCPYHGWKFESNGTC 91
Query: 202 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVS 261
++IP P IP+ A V TY V+E G +W+++ +P F F P + V
Sbjct: 92 MEIPANPPGVPIPKRARVDTYPVQEKYGFIWLFLGDLPEDERPPIPSFPQFDDPNLRCVF 151
Query: 262 TIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
+ +++ ++EN MD +H H+R+ K + A+ +EV
Sbjct: 152 GEYTWNANYTRVIENTMDCSHTLFLHNRS--LGKSDKARIEDYEVV 195
>gi|412985155|emb|CCO20180.1| predicted protein [Bathycoccus prasinos]
Length = 654
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 180/482 (37%), Gaps = 100/482 (20%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
++W + WYP + DAP + + ++V++K G C +D CPHR A LS G
Sbjct: 154 FNWQKNWYPTSPVSFLETDAPNAIKILGLEMVVWKTKNG-WSCLEDSCPHRRAPLSLG-F 211
Query: 182 IDGR---LECLYHGWQFEGEGKCVKIP-----QLPADAKIPRSACVRTYEVKESQGVVWV 233
ID L C YHGW+F +GKCV IP A A + +C Y K GV+WV
Sbjct: 212 IDSNKDALVCRYHGWEFAKDGKCVDIPMSIDENANATACNSKKSCASEYPCKVHAGVLWV 271
Query: 234 WMSQKTPPNPD---KLPWFENFAR-PGFQDVS-TIHELPYDHSILLENLMDPAHIPISHD 288
W + K ENF+ G D + ELP ++ LEN DP+H H
Sbjct: 272 WPETGADAFLEASVKKCATENFSELQGAGDNEWGMVELPVGYNPALENQFDPSHAEWLHA 331
Query: 289 RTDYSAKREDAQPLG-------FE-VTERTDRGFAGQWG--REKDGSMPNFLRFEAPCVL 338
R D + + FE + T GF + G + ++ F APC
Sbjct: 332 RYDAESNIRSVSEMADFVPMTKFESFDDDTTEGFKVRHGGYNAANSNIDATRVFTAPC-- 389
Query: 339 QNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRF-----------GTTG-------- 379
+ E +D+K K Y + L PT ++++ +F GT
Sbjct: 390 SSRSEYLDDKG--KPYLSAHILYTPTEPNRTLMFTKFQAYQFTAVQGAGTRKVSVADKIE 447
Query: 380 ---TSPWIKLFPDWYFH--------------------QSASKVFEQDMGFLSSQNEVLLK 416
T+P LF + Y +A + QD+ + + + K
Sbjct: 448 NLFTTPVRNLF-NLYIQNFNTIGDARLIFTGLQHGAGNAAYTLGNQDIRAMHGVEKDMKK 506
Query: 417 EKVPTKELYFNLRSIDTWVAEYRKWMDK-AGHGMPYYFGHSTISLPKVPAVVEHAPAGLV 475
+ Y+ D V+ +R WMD +G + S + P V E
Sbjct: 507 RGGKWNKAYYLPTVADKGVSAFRTWMDNFTENGNVEWLDGSAVD--ATPTVSEEEQ---- 560
Query: 476 AGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALA 535
RY RH HC+ C++A+ + L A+ +L A +
Sbjct: 561 ---------------------TERYHRHTKHCRACKAALNELGILEERLLLASKVLLATS 599
Query: 536 IL 537
++
Sbjct: 600 LI 601
>gi|399078123|ref|ZP_10752723.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034061|gb|EJL27338.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 336
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP ++ + P+ D +++Y+ G L DRCPHR A S G +++ ++
Sbjct: 8 WYPAGWVHEL-EKGPIARKFLDIPVMIYRLSTGVLAALHDRCPHRFAPFSYGTIVEDKVR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C+YHG +F+ G+CV A P+ A VR++ V E VVW+WM ++ P + +P
Sbjct: 67 CIYHGLEFDSAGRCVGNALCFA---APKVAKVRSFPVFEQDNVVWIWMGEEEPADTSTIP 123
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ P ++ V + D+ +L +NLMD HI + H
Sbjct: 124 RYAYHNDPKYRCVYGNNYTKADYRLLCDNLMDLTHIVLLH 163
>gi|206563700|ref|YP_002234463.1| [2Fe-2S]-binding protein [Burkholderia cenocepacia J2315]
gi|421867809|ref|ZP_16299462.1| Vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
H111]
gi|444364026|ref|ZP_21164381.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|444372565|ref|ZP_21172008.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198039740|emb|CAR55710.1| [2Fe-2S]-binding protein [Burkholderia cenocepacia J2315]
gi|358072222|emb|CCE50340.1| Vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
H111]
gi|443593327|gb|ELT62073.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443593707|gb|ELT62420.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
Length = 356
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 11/206 (5%)
Query: 95 VPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 154
+ +PD H+ P + RG + +Y WYP+ + V + AP+GLT +QIVL
Sbjct: 1 MTSPDQHEAQHDPVRDYLDRG---IKNY-----WYPVAPSWQVSN-APVGLTRLSEQIVL 51
Query: 155 YKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 214
++D G++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ +
Sbjct: 52 WRDHDGKVHALEDRCPHRGARLSLGWNLGGNIACWYHGIEVDGGGTVNRVPAV-SNCPLE 110
Query: 215 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
+ CV++Y V+E G +++W + P L E + + ++ +
Sbjct: 111 GTKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVAEEYGHFLCVSNWKCNYQYAI 170
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQ 300
+N+MDP H H T +S D Q
Sbjct: 171 DNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|107026012|ref|YP_623523.1| Rieske (2Fe-2S) protein [Burkholderia cenocepacia AU 1054]
gi|116692803|ref|YP_838336.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105895386|gb|ABF78550.1| Rieske (2Fe-2S) region [Burkholderia cenocepacia AU 1054]
gi|116650803|gb|ABK11443.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia HI2424]
Length = 356
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 11/206 (5%)
Query: 95 VPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 154
+ +PD H+ P + RG + +Y WYP+ + V + AP+GLT +QIVL
Sbjct: 1 MTSPDQHEAQHDPVRDYLDRG---IKNY-----WYPVAPSWQVSN-APVGLTRLSEQIVL 51
Query: 155 YKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 214
++D G++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ +
Sbjct: 52 WRDHDGKVHALEDRCPHRGARLSLGWNLGGNIACWYHGIEVDGGGTVNRVPAV-SNCPLE 110
Query: 215 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
+ CV++Y V+E G +++W + P L E + + ++ +
Sbjct: 111 GTKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVADEYAHFLCVSNWKCNYQYAI 170
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQ 300
+N+MDP H H T +S D Q
Sbjct: 171 DNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|218232265|ref|YP_002367205.1| vanillate O-demethylase oxygenase [Bacillus cereus B4264]
gi|218160222|gb|ACK60214.1| vanillate O-demethylase oxygenase subunit [Bacillus cereus B4264]
Length = 315
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 28/224 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + KD+ P+ + + VLY+D KGE++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYVKDI-KKIPVKKRIAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 246
C YHGW+F+ G CV+IP P + IP+ A +Y VKE G++W++ S++ PP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFAHTFSYPVKEKIGLIWIYPDSEENPPEWQTF 130
Query: 247 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
EN F F H + +E+++D AH+ H +T ++ A+ +
Sbjct: 131 HVMENTPFKLSFFHATWNAHL-----TRSIESVLDIAHLAYVHKKT--IGRKTKAESTNY 183
Query: 305 EVTERTDR------------GFAGQW----GREKDGSMPNFLRF 332
++ D+ F QW G++++ S ++ F
Sbjct: 184 KLEGTLDQFIFSNGDAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|254461027|ref|ZP_05074443.1| vanillate O-demethylase oxygenase subunit [Rhodobacterales
bacterium HTCC2083]
gi|206677616|gb|EDZ42103.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium HTCC2083]
Length = 355
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +KD +D +T+ +Q +V+++ G++ +DRCPHRL LS+G+ I ++
Sbjct: 8 WYVAGWSKDFGEDL-RAITITEQNLVMFRSTDGQIVALEDRCPHRLLPLSKGKRIGDTVQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F +GKCV++ P +P SA V T+ V E+ G+VW+W + +
Sbjct: 67 CGYHGMTFGTDGKCVRV---PGQDNLPASAYVETFPVHEAHGIVWIWPGEAALAADTPVF 123
Query: 248 WFENFARPGF--QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
F+ P + +H L ++ + ENL+DPAH+ H T SA E+ +
Sbjct: 124 DLPEFSDPNWHAHHGDGLH-LNANYLNVAENLVDPAHVSFVHPTTLGSAASEN---VPVH 179
Query: 306 VTERTDRGFAGQWGRE 321
V+ D+ A +W ++
Sbjct: 180 VSTSGDQIVAWRWIKD 195
>gi|114765025|ref|ZP_01444172.1| Rieske (2Fe-2S) protein [Pelagibaca bermudensis HTCC2601]
gi|114542572|gb|EAU45597.1| Rieske (2Fe-2S) protein [Pelagibaca bermudensis HTCC2601]
Length = 356
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 37/204 (18%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ DD T+ +V+++ G + +DRCPHRL LS+G+ I ++
Sbjct: 9 WYVAGWSTEI-DDELRRFTILGDNVVMFRKSDGAVAALEDRCPHRLLPLSKGKRIGDTVQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ G CV++ P +P+SA V +Y + E G+VW+WM +P+K
Sbjct: 68 CGYHGLTFDCSGACVRV---PGQTNLPKSAYVISYPIVEKHGIVWIWMG-----DPEKAD 119
Query: 248 WFENFARPGFQDVS-------TIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRE--- 297
+ F P F D + +H L ++ + ENL+DPAH+ H T +A E
Sbjct: 120 EAQVFDMPEFSDPAWAAHHGDALH-LKSNYLNVAENLVDPAHVSFVHPTTLGNAASENVP 178
Query: 298 -----------------DAQPLGF 304
DA+P+GF
Sbjct: 179 VHVQTEGEAIVAWRWIRDAEPIGF 202
>gi|398992730|ref|ZP_10695693.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
gi|398136495|gb|EJM25581.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
Length = 313
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
T W+ + L++ V D PL + +++VL+++ G+ +DRCPHR L+ G++++
Sbjct: 3 TPGWWAMALSEAVIDQTPLAVAFGGEELVLFRNAAGQAFALEDRCPHRRVPLALGRVVES 62
Query: 185 RLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP--- 240
L+C YHGW F+G G C +IP L A ++P R + V E+ G V VW+ + TP
Sbjct: 63 GLQCGYHGWTFDGANGACTQIPNLHAGERVPARYAARAFAVSEANGFVHVWLGEGTPQVE 122
Query: 241 -PNPDKLPWFENFARPGFQDVSTIHELPYDHSI 272
P+ D P F STI + +D +
Sbjct: 123 LPSSDYQPSGREFTG------STIVNMSHDQYL 149
>gi|399076291|ref|ZP_10751944.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. AP07]
gi|398037624|gb|EJL30809.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. AP07]
Length = 361
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 15/196 (7%)
Query: 101 HKVLVGPASEEESRGERRVADYDW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD 157
H GP+ + G ++ DW + W+P+ +V AP + D +V+++
Sbjct: 5 HDSTPGPSLRPDGSG---ISPGDWDVLSRFWFPIAEVVEV-GAAPFKARLLDVDLVVFRG 60
Query: 158 GKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA 217
G L +DRCPHR +LS GQ+ DG++ C YH F+ G+C +IP + DA+IPR+
Sbjct: 61 ANG-LAVARDRCPHRHVRLSGGQVEDGQIICPYHALAFDETGQCTRIPAVGPDARIPRNY 119
Query: 218 CVRTYEVKESQGVVWVWMSQKTPPNPDK-LPWFENFARPGFQDVSTI--HELPYDHSILL 274
V T+ V+ G+VW + P+PD+ LP F + +DV I + P + +
Sbjct: 120 RVETFPVQVRYGLVWTCLV----PDPDRDLPVFPDLVDSRPEDVVFIKTRDWPVSSARQV 175
Query: 275 ENLMDPAHIPISHDRT 290
EN D H+P+ H T
Sbjct: 176 ENFFDIGHLPVVHGAT 191
>gi|302831235|ref|XP_002947183.1| hypothetical protein VOLCADRAFT_87282 [Volvox carteri f.
nagariensis]
gi|300267590|gb|EFJ51773.1| hypothetical protein VOLCADRAFT_87282 [Volvox carteri f.
nagariensis]
Length = 547
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 167/453 (36%), Gaps = 111/453 (24%)
Query: 134 TKDVPDDAPLGLTVFDQQIVLYKDGKG-ELRCHQDRCPHRLAKL---------------- 176
T+D+ P + + +V++ D R +D CPHRL L
Sbjct: 19 TRDLDRSRPHRFVLLNIPLVIWWDSNAASWRVFEDVCPHRLVPLRCAATERDEGSEGPQH 78
Query: 177 ----------------SEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACV 219
SEG++ G LEC YHGW F +G+C +PQ + PR AC
Sbjct: 79 VYTNTLTIGPTCTPLRSEGRINKAGLLECGYHGWAFNSQGRCEVVPQ-QGKSDTPR-ACA 136
Query: 220 RTYEVKESQGVVWVW---MSQKTPPN-----------------PDKLPWFENFARPG--- 256
+ E QG+++V + PN ++P P
Sbjct: 137 VAFHAAERQGLMFVLPRPLPSALLPNGAANGCLGEALAEAVAEETRIPLVPELDEPNGKW 196
Query: 257 -FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE----VTERTD 311
QDV +LPYD S L+EN++D +H+P +H A + +G VT ++
Sbjct: 197 IAQDV--WRDLPYDWSTLMENVLDASHVPFTHH-----ASMSNRNTIGLYDLKLVTPLSE 249
Query: 312 RGFAGQW--GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKS 369
RGF G W G P F AP ++N ++ Y+ P GK
Sbjct: 250 RGFTGVWKTGPRAGKLGPQSTVFTAPAFMRNRLDAKGFSAMTVVYAV------PMRPGKC 303
Query: 370 MLIVRFGTTGTSPWIKL----FPDWYFHQSASKVFEQDMGFLSSQNEVLLKEK---VPTK 422
LI R +P +L PDW+ H S+ + E D FL E L + + +
Sbjct: 304 RLINRNILRFNNPIPQLVFSSLPDWWSHVSSHVLLEDDQIFLHLGEEELARRRAAGLTHS 363
Query: 423 ELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASL 482
++ + DT+V + +W+ K AG V + A L
Sbjct: 364 QVCYMPSQADTYVIAFNRWIQKY----------------GGGGPFGGTDAGFVEALGARL 407
Query: 483 PAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVK 515
K L +RY +H +C C+ +K
Sbjct: 408 SRK---------ELLDRYSQHTENCATCQRGLK 431
>gi|91779910|ref|YP_555118.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
xenovorans LB400]
gi|91692570|gb|ABE35768.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
xenovorans LB400]
Length = 363
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V DAP+G+T QIVL++D +G++R +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPVGITRLGDQIVLWRDKEGKVRALEDRCPHRGARLSLGWNLGGSVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G K+P + ++ + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGIEVDGGGTVTKVPAV-SNCPLEGQKCVKSYPVEEHAGAIFLWFGDDAHKEPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|167578135|ref|ZP_02371009.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis TXDOH]
Length = 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T +QIVL++D +G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQVSS-APVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + ++ + ACVR+Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVRSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ P + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|187918962|ref|YP_001887993.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187717400|gb|ACD18623.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 352
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D PLG+T+ + +V+ + GE+R RCPH+ L+ G+++DG++EC YHGWQF+G G
Sbjct: 38 DKPLGVTLLGESVVIAR-LNGEVRAMHGRCPHKGTALALGEVVDGKIECPYHGWQFDGGG 96
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ- 258
KCV++P + + + Y E G++WV + + P PD F + P F+
Sbjct: 97 KCVRVPAR-EELTEGMNVSIDCYYAAEHVGIIWVALEKPIAPLPD----FPELSDPSFRI 151
Query: 259 DVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+E LEN +D AH P HD T
Sbjct: 152 QQGPSYEWATSAPRRLENFVDFAHFPYVHDGT 183
>gi|110289598|gb|AAP55073.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
Length = 527
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 141/312 (45%), Gaps = 39/312 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C + C HR L G + +GR++
Sbjct: 220 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQ 279
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW++ +GKC K+P + +R+ E +G+VW+W P + P
Sbjct: 280 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSL 334
Query: 246 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVK 386
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN--------RESVDNKTGEKHYST 356
+T + G G W P + F PC++ + E K H
Sbjct: 387 FLTPSS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQ 439
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLK 416
L +C P+ + K+ L+ R + +PWIK P + H S E+ +S +N L
Sbjct: 440 -LHICLPSSRNKTRLLYRM-SLDFAPWIKHVP--FMHILWSHFAEK----VSPKNSEQLH 491
Query: 417 EKVPTKELYFNL 428
K+ + +++L
Sbjct: 492 TKLLSISCHYSL 503
>gi|333896094|ref|YP_004469968.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333111359|gb|AEF16296.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 327
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + +K++ + P+G+T F Q++V ++D + C D+C HR A L+ G++ + +
Sbjct: 5 QWYAVLDSKELKKNKPIGVTRFSQKLVFWRDELDNISCIFDKCCHRGASLALGKVANNHI 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
+C +HG++++ GK IP D + + V +Y KE+ G +WVW + P K+
Sbjct: 65 QCPFHGFKYDSSGKVTSIPANGKDRPVLSNFKVNSYIAKEAYGFIWVWYGEPRENLP-KI 123
Query: 247 PWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+FE F+ GF ++ +H ++ +EN +D H+P H+ T
Sbjct: 124 KFFEELKEGFSYGGFSEIWRVH-----YTRAIENQLDVVHLPFVHNTT 166
>gi|312960145|ref|ZP_07774657.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
gi|311285639|gb|EFQ64208.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
Length = 357
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++ LG T+ +Q IV ++D G ++ DRCPHR A L G+++ ++
Sbjct: 8 WYIAGWADELAQGGMLGRTIVEQPIVFFRDSHGVIQALADRCPHRFAPLHRGKVVGDSVQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G G+C P + IP++ACVR + E G +WVW + + +P
Sbjct: 68 CPYHGLRFDGSGQCTHNPH--GEGNIPKAACVRGFAAVERHGAIWVWPGDRHLASDALIP 125
Query: 248 WFENFARP-------GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
F F + G+ +EL L +N+MD +H+ H T
Sbjct: 126 DFSFFEQAPTHAKGHGYLPTRAHYEL------LSDNIMDLSHVDFLHPDT 169
>gi|428310783|ref|YP_007121760.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428252395|gb|AFZ18354.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 340
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 135/298 (45%), Gaps = 17/298 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + L+K +P + L T+ + + +++D G+ +DRC HR ++LS G++ G+++
Sbjct: 7 WYIIALSKQLPPNKILQRTLLGEWLAIFRDENGKAVALRDRCMHRNSRLSCGKVRQGKIQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW ++ GK + +P D + + V++Y+ KE G ++V +S P
Sbjct: 67 CPYHGWIYDNTGKIMAVPSEGKDFQPLSTRQVKSYQTKEQDGYIYVQLSDNKSEEFAPFA 126
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+P+++ PG++ V I+ + + EN +D H H ++++ QPL
Sbjct: 127 MPYYQ---EPGWETVRVINRFRNNVTNCAENFIDIPHTAFVHPGVFRTSRQ---QPLKMS 180
Query: 306 VTERTDRGFAGQWGREKD-GSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG----LFL 360
V R F + + G FL ++ + + + N T + Y G LF+
Sbjct: 181 VERRNGSTFVEYYNETTNLGWYSRFLNWKGYEIRHTDSFHMPNITSVE-YDMGPHRRLFI 239
Query: 361 CRPT--GQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLK 416
+ S L+ T W K+ + H +A + QD+ L Q E + K
Sbjct: 240 TSQSIPETENSTLVYTDVTYNYGIWNKIARP-FVHWTAQHIIRQDIKILDIQGEAIAK 296
>gi|255545394|ref|XP_002513757.1| chlorophyll synthase, putative [Ricinus communis]
gi|223546843|gb|EEF48340.1| chlorophyll synthase, putative [Ricinus communis]
Length = 535
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 148/334 (44%), Gaps = 39/334 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++ V+++ G+ C Q+ C HR L G + +GR++
Sbjct: 218 WYPVAFSTDLKDDTMIPIDCFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 277
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +GKC K+P + KI C E +G++WVW P L
Sbjct: 278 CPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCF------EQEGMIWVWPGSDPPAA--TL 329
Query: 247 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + A GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 330 PSLQPPA--GFHVHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWTVPSLVTF 385
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYSTG 357
+T + G G W P + F PC++ + E + H
Sbjct: 386 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTRQCATHLHQ- 437
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVLL 415
L +C P+ + K+ L+ R + +P +K P ++ + A +V +D+ + Q E ++
Sbjct: 438 LHVCLPSSRQKTRLLYRM-SLDFAPLLKHIPFMEYLWRHFAEQVLNEDLRLVVGQQERMI 496
Query: 416 KEKVPTKELYFNL-RSIDTWVAEYRKWMDKAGHG 448
+NL + D YR W D G
Sbjct: 497 -----NGANVWNLPVTYDKLGVRYRLWRDAVERG 525
>gi|167565588|ref|ZP_02358504.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
oklahomensis EO147]
Length = 337
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T +QIVL++D +G++ +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGMTRLSEQIVLWRDQQGQVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ P + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|295699780|ref|YP_003607673.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295438993|gb|ADG18162.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 354
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 87/168 (51%), Gaps = 19/168 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +V DDA T+ ++LY+ G+L QDRC HR A LS G+ +
Sbjct: 7 WYVAAWSHEVTDDALFSRTIIGTPVLLYRTTDGQLVALQDRCCHRGAPLSVGRREGDCVR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHG +F+ G CV+ P P +IP A VR+Y V E +W+WM +P +P
Sbjct: 67 CLYHGLKFDARGTCVEAPAQP---RIPPKATVRSYPVVERHRWIWIWMGDPMLADPATIP 123
Query: 248 ---WFENFA---RPGFQDVSTIHELPYDHSILL--ENLMDPAHIPISH 287
W ++ A PG+ IH YD + LL +NL+D +H+P H
Sbjct: 124 DTHWLDDPAWRCLPGY-----IH---YDVNYLLICDNLLDFSHLPFVH 163
>gi|167913596|ref|ZP_02500687.1| Rieske [Burkholderia pseudomallei 112]
Length = 330
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D W P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W ++
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWA-CARDA 127
Query: 240 PPNPDKLPWFENFAR 254
PP + +P AR
Sbjct: 128 PPPAEAIPRAPRSAR 142
>gi|354725108|ref|ZP_09039323.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
mori LMG 25706]
Length = 340
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W PD
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDA 132
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LTFQDELADTENFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|302834211|ref|XP_002948668.1| hypothetical protein VOLCADRAFT_89016 [Volvox carteri f.
nagariensis]
gi|300265859|gb|EFJ50048.1| hypothetical protein VOLCADRAFT_89016 [Volvox carteri f.
nagariensis]
Length = 308
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 49/211 (23%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGRL 186
W+PL + D P +T+ +V+++D G R +DRCPHRLA LSEG++ DG L
Sbjct: 24 WWPLIPVDYLKPDRPNPVTLLGITMVVWRDAGGRWRVFRDRCPHRLAPLSEGRVEPDGSL 83
Query: 187 ECLYHGWQFEGEGKCVKIPQ-----LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 241
C YHGW+F+G G C +IPQ A A R +C Y + ++WVW
Sbjct: 84 SCAYHGWRFDGSGACRRIPQAVDAASEAAACSSRRSCATAYPARVEFNMLWVW------- 136
Query: 242 NPDKLP----------------------WFENFA-------------RPGFQDVSTIHEL 266
PD P F+ ++ +P + ++
Sbjct: 137 -PDASPDAEAAAAATELVVSNDLRRRDKQFKEYSSSMESPRPSASSQKPPLPLAWYVRQV 195
Query: 267 PYDHSILLENLMDPAHIPISHDRTDYSAKRE 297
PY + I +EN++DP+H+P SH KR+
Sbjct: 196 PYSYEICMENVLDPSHLPYSHHGHSPQLKRD 226
>gi|334125546|ref|ZP_08499535.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
hormaechei ATCC 49162]
gi|295097475|emb|CBK86565.1| Phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases, large terminal subunit [Enterobacter
cloacae subsp. cloacae NCTC 9394]
gi|333387009|gb|EGK58213.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
hormaechei ATCC 49162]
Length = 340
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LTFPDELADTENFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|383452944|ref|YP_005366933.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
gi|380734627|gb|AFE10629.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
Length = 363
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 134/322 (41%), Gaps = 63/322 (19%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ L ++++ D PL T+ +VL++ G+ DRCPHR LS G++ +G+LE
Sbjct: 26 WFILCTSREL-GDRPLARTLQGTPLVLFRGEGGKPGALMDRCPHRNVPLSLGRVTNGQLE 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW+F+ G+C IP L + + RS C +Y +E G VWV+ + P P +
Sbjct: 85 CGYHGWRFDTGGQCRLIPGLVGEPEA-RSRCAASYATREQDGFVWVYSTPGVEPTSEPFR 143
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH----------DRTDY--- 292
P + + V + P +LEN +D H H + D
Sbjct: 144 FPLLDA---ADYTTVRRVLRAPGSLHAVLENTLDVPHTAFLHGGLFRTAEKKNEIDVVVR 200
Query: 293 -SAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGE 351
SA R +A+ LG E +G G+ G + +F RF P + Q V+ + GE
Sbjct: 201 RSADRVEAEYLG----EPAPKGLVGRLLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGE 251
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPW---------IKL-FPDWYFHQSAS---- 397
KS ++V T S W +KL P W +
Sbjct: 252 ----------------KSHIVVNSAMTPVSDWDTLVYAVVTVKLPVPRWLLKAAVPFVLP 295
Query: 398 ---KVFEQDMGFLSSQNEVLLK 416
+F QD+ L Q + + +
Sbjct: 296 VGLHIFGQDVRILEKQTDSIRR 317
>gi|91786893|ref|YP_547845.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas sp. JS666]
gi|91696118|gb|ABE42947.1| Rieske (2Fe-2S) region [Polaromonas sp. JS666]
Length = 350
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Query: 147 VFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 206
+ ++ +V Y+ G QDRCPHR L G+++ +EC YHG F+ GKCVK P
Sbjct: 18 LLNEMVVFYRKEDGTAVALQDRCPHRFIPLHLGKIVGDSIECAYHGLTFDCSGKCVKNPH 77
Query: 207 LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENF-ARPGFQDVSTIHE 265
D K+P +A VR+Y V E G++W+WM + +P +P + + GF
Sbjct: 78 --GDGKVPAAARVRSYPVAEKHGMLWIWMGSQA-ADPVTIPDYSVLESEAGFATSRGYLH 134
Query: 266 LPYDHSILLENLMDPAHIPISHD 288
+ ++ ++ ENL+D +HI HD
Sbjct: 135 IEANYELMGENLLDLSHITYLHD 157
>gi|392980594|ref|YP_006479182.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392326527|gb|AFM61480.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 340
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA K P CVR+Y+V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYQVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LSFPDELADTEHFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|124266197|ref|YP_001020201.1| vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
gi|124258972|gb|ABM93966.1| putative vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
Length = 353
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
T WY L+ +V A + D I++Y+ G DRCPHR A L G+ I
Sbjct: 13 TNAWYVAALSTEVGAQALFHRKILDTSILIYRKQDGTAVALHDRCPHRFAPLHLGKRIGD 72
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
+ CLYH QF+ G+C K P + +IP++A VR++ ++E G +W+WM + P+
Sbjct: 73 EVACLYHALQFDCTGQCTKNPH--GNGQIPKAAKVRSFPLEERYGFLWIWMGEDA-PDLA 129
Query: 245 KLPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+LP F + P T + ++ ++++N+MD +H+ H
Sbjct: 130 RLPDFGELDKGPDTGVAFTYMHMKANYELIIDNVMDLSHVDHVH 173
>gi|428310254|ref|YP_007121231.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428251866|gb|AFZ17825.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 383
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + + + ++ Q I +Y+D G++ +D CPH+ L +G++ L
Sbjct: 26 WYPVGWASQLKPGDIMPVVIWQQAIAVYRDETGQIHALEDACPHKGIALHKGKVQGCHLT 85
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F G G+CV IP LP K+PR A R+Y V+E ++W++ T +LP
Sbjct: 86 CAYHGWEFNGNGECVGIPYLPEGQKLPR-AQARSYPVQEKYNLIWLFPGDPTLAASQELP 144
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
F P + + + SI EN MD H
Sbjct: 145 HVPEFDHPDYLMIPLAAHMQSHFSICNENAMDVFH 179
>gi|383788948|ref|YP_005473517.1| putative oxidoreductase [Caldisericum exile AZM16c01]
gi|381364585|dbj|BAL81414.1| putative oxidoreductase [Caldisericum exile AZM16c01]
Length = 322
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 158/334 (47%), Gaps = 46/334 (13%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + +K++ D P+GL F +++V+++ G + C D+C HR A LS+G++++ +
Sbjct: 5 QWYIVLSSKELKD-KPIGLKRFGEKLVMWRTKDG-IACIADKCAHRGASLSKGKIVNNHI 62
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
+C +HG++++ G+ V IP +K+P + V++Y+VKE G ++++ ++ P ++
Sbjct: 63 QCPFHGFEYDSSGRVVLIPANGKASKVPDNFKVKSYKVKEKNGFIFLFYGDESKA-PGEI 121
Query: 247 PWFE----NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRE----- 297
P+F+ +F + H +S +EN +DP H+P H T R
Sbjct: 122 PFFDWIDGSFTYDELNEPWNTH-----YSRCIENQLDPIHLPFVHHNTIGIGGRTVADGP 176
Query: 298 -----DAQPLGFEVTERTDRGFAGQWGREKDGSMPN-FLRFEAPCVLQNNRESVDNKTGE 351
D++ + F V R D G + E G +L F P QN+ +
Sbjct: 177 VVEWFDSEKMRFYVFNRKDDGTPPKKPEELKGQKSKVYLEFIFPNFWQNH-------ISD 229
Query: 352 KHYSTGLFLCRPTGQGKSMLIVR--FGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSS 409
K + F+ P + S++ VR TG KL + S F++ +
Sbjct: 230 KFFIVAAFV--PVDEEHSLVYVRQYVKITGIKFIDKLIA------TLSIPFDR---IVLH 278
Query: 410 QNEVLLKEKVPTK---ELYFNLRSIDTWVAEYRK 440
Q+ +++ ++P K ++ NL D + EYRK
Sbjct: 279 QDRRVVETQIPKKSALQMDENLVQGDLPIIEYRK 312
>gi|296104599|ref|YP_003614745.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295059058|gb|ADF63796.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 340
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA K P CVR+Y+V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYQVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LTFPDELADTEHFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|401765142|ref|YP_006580149.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|400176676|gb|AFP71525.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 340
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LTFPDELADTDSFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|148555225|ref|YP_001262807.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148500415|gb|ABQ68669.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 362
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + D+ AP + V + I L++ G DRCPHR A L +G+L+ L+
Sbjct: 8 WYVAGWSGDL-GPAPRRIRVLGEWIALFRLADGTAAAIGDRCPHRFASLGDGKLVGDSLQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+ +G+CV P D +P VR+Y + E G +WVW + +P +P
Sbjct: 67 CPYHGLRFDRDGRCVHNPH--GDGSVPAGGGVRSYPLVERHGALWVWTGDRGRADPAAIP 124
Query: 248 WFENFARPGFQDVSTIH---ELPYDHSILLENLMDPAHIPISH---------DRTDYSAK 295
F F P VS H PY+ ++ +NL+D +H H DRT +
Sbjct: 125 DFARFDDPALA-VSRGHLKVTAPYE--LVTDNLLDLSHAAFIHPFLASPDAADRTRTGVR 181
Query: 296 RED 298
+ED
Sbjct: 182 QED 184
>gi|385206189|ref|ZP_10033059.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
gi|385186080|gb|EIF35354.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
Length = 363
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V DAP+G+T QIVL++D +G++R +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPVGITRLGDQIVLWRDKEGKVRALEDRCPHRGARLSLGWNLGGSVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G K+P + ++ + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGIEVDGGGTVTKVPAV-SNCPLEGQKCVKSYPVEEHAGAIFLWFGDDAHKEPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|419958593|ref|ZP_14474656.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae GS1]
gi|388606496|gb|EIM35703.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae GS1]
Length = 340
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LTFPDELADTDSFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|402568505|ref|YP_006617849.1| Rieske (2Fe-2S) protein [Burkholderia cepacia GG4]
gi|402249702|gb|AFQ50155.1| Rieske (2Fe-2S) protein [Burkholderia cepacia GG4]
Length = 356
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 98 PDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD 157
P H+V P + RG + +Y WYP+ + V +AP+GLT +QIVL++D
Sbjct: 4 PAQHEVQHDPVRDYLDRG---IKNY-----WYPVAPSWQV-SNAPVGLTRLSEQIVLWRD 54
Query: 158 GKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA 217
+G++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ + +
Sbjct: 55 HEGKVHALEDRCPHRGARLSLGWNLGGNIACWYHGVEIDGGGTVNRVPAV-SNCPLEGTK 113
Query: 218 CVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 277
CV++Y V+E G +++W + P L E + + ++ ++N+
Sbjct: 114 CVKSYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVADEYGHFLCVSNWKCNYQYAIDNV 173
Query: 278 MDPAHIPISHDRTDYSAKREDAQ 300
MDP H H T +S D Q
Sbjct: 174 MDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|359478791|ref|XP_003632170.1| PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent
translocon component 52, chloroplastic-like [Vitis
vinifera]
Length = 474
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 131/351 (37%), Gaps = 33/351 (9%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQ 180
+DW +WYP+ D+ P V + ++ D + E + D C H LA LSEG
Sbjct: 56 FDWFSQWYPVASVCDLDKRKPHAKRVMGFDVAVWWDRNESEWKVFDDSCAHGLAPLSEG- 114
Query: 181 LID--GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWVWM 235
+ID G+L+C+YHG F G G C IPQ P D + A Y G+VW W
Sbjct: 115 MIDQWGQLQCVYHGQCFNGSGDCKFIPQAPPDGPPVHTFKKARAAVYPSAVQNGIVWFW- 173
Query: 236 SQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP--AHI 283
PN D K P+ P + P+ + +L+EN+MD AH
Sbjct: 174 -----PNTDSQFKDILTKKKPPYIPELDDPSYTKSMGARYFPFRYEVLMENIMDLAYAHY 228
Query: 284 PISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEA---PCVLQN 340
I + P+ V GF + + +P L + P N
Sbjct: 229 RIMQIPQANRXIEKGGTPIEISVMRIAIDGFVAERELARSKFIPPCLCYTCLGFPAYQSN 288
Query: 341 NRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIK-LFPDWYFHQSASKV 399
S D + + +C P G S LI PW + P W H + +
Sbjct: 289 GSVSSDLTKEVTIRALLILICVPVSPGNSRLIWT-SPRNFGPWTDCMVPXWMLHMRQNLI 347
Query: 400 FEQDMGFLSSQNEVLLKEKVPT--KELYFNLRSIDTWVAEYRKWMDKAGHG 448
+ + + L+K + K + +S D + +R W+ K G
Sbjct: 348 LDSAIYLPHVEEYKLMKAGLSNWQKACFMPTKS-DAHIIAFRAWLRKHSAG 397
>gi|149920026|ref|ZP_01908500.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
gi|149819123|gb|EDM78559.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
Length = 331
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ ++ V P+ L +VL+++ + EL C +DRCPHR LS G + GRL
Sbjct: 6 WYPILFSRRV-RQRPVALRRGGVDLVLFRNARRELVCLRDRCPHRGVPLSLGFVRAGRLV 64
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG++F+ G CV++P DA+IP C + V+E G+VW++ +LP
Sbjct: 65 CGYHGFEFDDAGACVRMPCEGPDARIPAGMCTDRFPVRERDGIVWMFWGADGLAEATELP 124
Query: 248 WFENFARPGFQDVSTIHEL--PYDHSILLENLMDPAHIPISH 287
+ A G+ S EL P + LEN D H H
Sbjct: 125 YLR--ATVGYAGTSHDSELEWPLSFTNSLENNFDIHHFNYVH 164
>gi|15644039|ref|NP_229088.1| oxidase-related protein [Thermotoga maritima MSB8]
gi|418044556|ref|ZP_12682652.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermotoga maritima
MSB8]
gi|4981841|gb|AAD36358.1|AE001783_9 oxidase-related protein [Thermotoga maritima MSB8]
gi|351677638|gb|EHA60785.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermotoga maritima
MSB8]
Length = 331
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 151/337 (44%), Gaps = 48/337 (14%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG-- 184
+WY + ++++ +G+T F +++ ++D G++ C D C HR A +S G+++
Sbjct: 5 QWYVVLSSRELKKGQLIGVTRFGEKLAFWRDSNGKVHCISDICCHRGASISHGKVLSNGE 64
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
R+ C +HG++++ +G+ IP + +P + V++Y E +W+W + P P
Sbjct: 65 RVMCPFHGFEYDSQGRVRTIPANGRNTPVPENFRVKSYPTYELADFIWIWYGDREPEKPP 124
Query: 245 KLPWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKR---- 296
K +F++ F++V +H +S +EN +DP H+P H T R
Sbjct: 125 K--YFDDITDELVYTEFKEVWNVH-----YSRAIENQLDPIHLPFVHYNTIGRGNRTVVD 177
Query: 297 ------EDAQPLGFEVTERTDRGFAGQWGREKDGSMPN--FLRFEAPCVLQNNRESVDNK 348
+D + F V R D G + E D + +L F+ P + QN+
Sbjct: 178 GPIVEWKDDEMFYFYVFNRIDDGTPARKPEEMDPKRKSKVYLEFKFPNIWQNH------- 230
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRF--GTTGTSPWIKLFPDWYFHQSASKVFEQDMGF 406
EK T F P +M+ +RF G TG KL K F +
Sbjct: 231 ISEKIRVTAAFT--PIDDDHTMIYLRFYVGLTGIKFLDKLIA------VLGKPFNK---I 279
Query: 407 LSSQNEVLLKEKVPTK-ELYF--NLRSIDTWVAEYRK 440
+ Q++ +++ ++P + EL NL D + EYRK
Sbjct: 280 VLHQDKRVVETQIPKRSELRMGENLIPGDAPILEYRK 316
>gi|148270571|ref|YP_001245031.1| Rieske (2Fe-2S) domain-containing protein [Thermotoga petrophila
RKU-1]
gi|222100224|ref|YP_002534792.1| Rieske (2Fe-2S) domain protein [Thermotoga neapolitana DSM 4359]
gi|281412879|ref|YP_003346958.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Thermotoga
naphthophila RKU-10]
gi|147736115|gb|ABQ47455.1| Rieske (2Fe-2S) domain protein [Thermotoga petrophila RKU-1]
gi|221572614|gb|ACM23426.1| Rieske (2Fe-2S) domain protein [Thermotoga neapolitana DSM 4359]
gi|281373982|gb|ADA67544.1| Rieske (2Fe-2S) iron-sulphur domain protein [Thermotoga
naphthophila RKU-10]
Length = 324
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 36/273 (13%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ + + +V P+G+ + +V ++D G++ +D C HR A+LS G++I+ R++
Sbjct: 5 WFAVLSSNEVRR-KPVGVRRLGRDLVFWRDSLGKVYALEDFCVHRRARLSAGKVINDRIQ 63
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG++++G G+ IP L + K+P V +Y V E ++W+W + P+K P
Sbjct: 64 CPFHGFEYDGNGRVRLIPALGKNYKVPDRFRVNSYPVYEKNNIIWLWFGEG---EPEKEP 120
Query: 248 WF-----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRE----- 297
F E+FA F+++ + P+ ++ EN +D H+P H T R
Sbjct: 121 KFFDDIDEDFAYAEFRELWNV---PFPRAV--ENQLDVMHLPFVHRTTIGRGNRTLVHGP 175
Query: 298 -----DAQPLGFEVTERTDRGFAGQWGREKDGSMPN-FLRFEAPCVLQNNRESVDNKTGE 351
D F V DRG + E G +L F P + QN+ E
Sbjct: 176 VVKWIDEDSFIFYVFNEVDRGQRVKRPEELSGEESRVYLEFIFPNLWQNH-------ISE 228
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRF--GTTGTSP 382
F+ P + K+M+ +RF TG P
Sbjct: 229 GTRVVAFFV--PVDRQKTMIYLRFYVKMTGLKP 259
>gi|119513068|ref|ZP_01632123.1| hypothetical protein N9414_17747 [Nodularia spumigena CCY9414]
gi|119462278|gb|EAW43260.1| hypothetical protein N9414_17747 [Nodularia spumigena CCY9414]
Length = 341
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 17/212 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + V + P + +F+Q+ VLY++ +G++ D+CPHR A S G + L
Sbjct: 6 WYACEFSSAVTN-KPKQVLMFNQRFVLYRNSQGQIIALNDQCPHRGAAFSLGWVEKDCLR 64
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+ +GKCV+IP + IP+ A V +Y V+E G VW++ S LP
Sbjct: 65 CPYHGWKFQADGKCVEIPSNAPETPIPKKAHVDSYPVEEKYGFVWLFYSDLPAAKRPLLP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-------LLENLMDPAHIPISHDRTDYSAKREDAQ 300
F + VST+ + YD I L+E +D H+ H ++ + + +
Sbjct: 125 TFPEYM------VSTMRPV-YDDGIDNANYARLMEANLDFTHVIAVHKKS-FGQRIPIDK 176
Query: 301 PLGFEVTERTDRGFAGQWGREKDGSMPNFLRF 332
+ ++V ++ D G Q E G+ +FL F
Sbjct: 177 TIKYQV-DKYDWGAVAQVNYESLGNSKSFLNF 207
>gi|170289277|ref|YP_001739515.1| Rieske (2Fe-2S) domain-containing protein [Thermotoga sp. RQ2]
gi|170176780|gb|ACB09832.1| Rieske (2Fe-2S) domain protein [Thermotoga sp. RQ2]
Length = 321
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 36/273 (13%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ + + +V P+G+ + +V ++D G++ +D C HR A+LS G++I+ R++
Sbjct: 2 WFAVLSSNEVRR-KPVGVRRLGRDLVFWRDSLGKVYALEDFCVHRRARLSAGKVINDRIQ 60
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG++++G G+ IP L + K+P V +Y V E ++W+W + P+K P
Sbjct: 61 CPFHGFEYDGNGRVRLIPALGKNYKVPDRFRVNSYPVYEKNNIIWLWFGEG---EPEKEP 117
Query: 248 WF-----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRE----- 297
F E+FA F+++ + P+ ++ EN +D H+P H T R
Sbjct: 118 KFFDDIDEDFAYAEFRELWNV---PFPRAV--ENQLDVMHLPFVHRTTIGRGNRTLVHGP 172
Query: 298 -----DAQPLGFEVTERTDRGFAGQWGREKDGSMPN-FLRFEAPCVLQNNRESVDNKTGE 351
D F V DRG + E G +L F P + QN+ E
Sbjct: 173 VVKWIDEDSFIFYVFNEVDRGQRVKRPEELSGEESRVYLEFIFPNLWQNH-------ISE 225
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRF--GTTGTSP 382
F+ P + K+M+ +RF TG P
Sbjct: 226 GTRVVAFFV--PVDRQKTMIYLRFYVKMTGLKP 256
>gi|186681095|ref|YP_001864291.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186463547|gb|ACC79348.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 358
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 41/346 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + + ++L +D G++ +D CPHR LS G+ +E
Sbjct: 13 WYYALPSNQIKPGMMISRIFLGEPVLLVRDQNGKVSAMRDICPHRAVPLSCGRFDGQEVE 72
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+F G+C IP L + ++ S V++YEV+E+QG +W++M+ P
Sbjct: 73 CCYHGWRFNSAGRCTAIPSLVEEQQMDLSRFDVQSYEVREAQGNIWIYMADPDKSQPAAS 132
Query: 247 PWFENFARPGFQDVS-----------TIHELP--YDHSILLENLMDPAHIPISH------ 287
E PGF++ S + + P DH+++ LMDPAH P H
Sbjct: 133 D-MEIPVIPGFEERSLRGASPTPQFVEVMKFPCFVDHAVV--GLMDPAHSPYVHRAWWWR 189
Query: 288 -DRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNNRESV 345
+ K+ DA P GF + G+ G +P + F P V +
Sbjct: 190 SGQLHEEVKQFDASPYGFTMRRHRLPANGGRLYLLIGGGVPETEISFRLPSV------RI 243
Query: 346 DNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLF-------PDWYFHQSASK 398
+ T H L P ++ V F T PW+ F + Q +
Sbjct: 244 EETTIGNHRVVNLTAVTPISDTETE--VTFVLYSTLPWVGFFKPLLHVLAQTFLGQDRTV 301
Query: 399 VFEQDMGFLSSQNEVLLKEKVPTKELYFNL-RSIDTWVAEYRKWMD 443
V +Q +G + L+K+ + Y+ L R VAE R++++
Sbjct: 302 VEKQQIGLKYNPVLRLIKDSDMQAQWYYQLKREYARSVAEGREFVN 347
>gi|254248108|ref|ZP_04941428.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
gi|124874609|gb|EAY64599.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
Length = 356
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 95 VPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 154
+ +PD H+ P + RG + +Y WYP+ + V + AP+GLT +QIVL
Sbjct: 1 MTSPDQHEAHHDPVRDYLDRG---IKNY-----WYPVAPSWQVSN-APVGLTRLSEQIVL 51
Query: 155 YKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 214
++D G++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ +
Sbjct: 52 WRDHDGKVHALEDRCPHRGARLSLGWNLGGNIACWYHGIEVDGGGTVNRVPAV-SNCPLE 110
Query: 215 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
CV++Y V+E G +++W + P L E + + ++ +
Sbjct: 111 GMKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVADEYAHFLCVSNWKCNYQYAI 170
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQ 300
+N+MDP H H T +S D Q
Sbjct: 171 DNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|384921320|ref|ZP_10021304.1| vanillate O-demethylase oxygenase, putative [Citreicella sp. 357]
gi|384464805|gb|EIE49366.1| vanillate O-demethylase oxygenase, putative [Citreicella sp. 357]
Length = 356
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 15/178 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ DD T+ +V+++ G + +DRCPHRL LS G+ + ++
Sbjct: 9 WYVAAWSTEI-DDELRRFTILGDHVVMFRKTDGTVAALEDRCPHRLLPLSRGKRVGDTVQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ G CV++ P +P+SA V + + E+ G+VW+WM T +P+ +
Sbjct: 68 CGYHGLTFDCSGACVRV---PGQTNLPKSARVDAFPIVENHGIVWIWMGDPTRADPETV- 123
Query: 248 WFENFARPGFQDVS-TIH-----ELPYDHSILLENLMDPAHIPISHDRTDYSAKREDA 299
F P F D + +H L + + ENL+DPAH+ H T +A E+
Sbjct: 124 ----FDMPEFSDPNWAVHHGDALHLESHYLNVAENLVDPAHVSFVHPTTLGNAASENV 177
>gi|167647208|ref|YP_001684871.1| vanillate monooxygenase [Caulobacter sp. K31]
gi|167349638|gb|ABZ72373.1| Vanillate monooxygenase [Caulobacter sp. K31]
Length = 347
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 29/174 (16%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+ WY +++ D PL T+ D IVLY+ G++ DRCPHR A LS G L DG+
Sbjct: 8 DAWYQAAFAREI-GDKPLARTLLDVPIVLYRSA-GKVVALHDRCPHRFAPLSMGALRDGQ 65
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG F +G+CV P +PR+ VR Y V E VVW+WM +P
Sbjct: 66 IICGYHGVGFGDDGRCVHNPH----GALPRAMRVRAYPVVERHTVVWIWMGDTRKADPAL 121
Query: 246 LPWFENFARPGFQDVSTIHELP------------YDHSILLENLMDPAHIPISH 287
+P D+S I E P ++ ++++NLMD +H H
Sbjct: 122 IP-----------DLSFIDETPETARICFYIPTAANYRLVVDNLMDLSHADYLH 164
>gi|302854901|ref|XP_002958954.1| hypothetical protein VOLCADRAFT_100270 [Volvox carteri f.
nagariensis]
gi|300255700|gb|EFJ39989.1| hypothetical protein VOLCADRAFT_100270 [Volvox carteri f.
nagariensis]
Length = 561
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 138/363 (38%), Gaps = 72/363 (19%)
Query: 97 TPDDHK-VLVGPASEEESRGERRVAD---YDWTEEWYPLYLTKDVPDDAPLGLTVF---- 148
+P H+ V G S EE R +D ++W ++WYP+ + P T+
Sbjct: 116 SPSVHRDVPEGMLSREELSDTERESDQRQFNWFQQWYPVAALDALDPTRPHAFTLLHTNP 175
Query: 149 --------DQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEG 199
Q +VL++DG G R +D CPHRLA LSEG++ DG L C YH W+F+G G
Sbjct: 176 HLHRNATVGQDLVLWRDGSGRWRAFKDACPHRLAPLSEGRIEKDGTLLCAYHAWRFDGSG 235
Query: 200 KCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWVWMS----------QKTPPNPDKL 246
C +P D + PRS C +Y E G++WVW K PP P
Sbjct: 236 ACTAMPFCSPDDPGRRNPRS-CAVSYPALERGGLLWVWAQGGPGAEEAAAAKQPPVP--- 291
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPA-------HIPISHDRTDYSAKREDA 299
P ++ RP LE + P+ H+P S T A
Sbjct: 292 PEVQDDGRPRAGVTCMGDRYKDPRPFQLEVTLPPSLEEGFKVHLPNSKSETVREA----- 346
Query: 300 QPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLF 359
T+ T G +DGS F P ++ +
Sbjct: 347 ------YTDFTPPGLVRIQSENRDGSRTILALFSTPI--------------RPGWTRLIM 386
Query: 360 LCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKV 419
+ P +G +V F + K+ P W H QD+ FL Q ++++++
Sbjct: 387 VSSPDNEGGGRSVVGFVGS------KMLPVWLAHLLGPLFLHQDLLFLHYQERAVMRQQL 440
Query: 420 PTK 422
K
Sbjct: 441 ERK 443
>gi|356552681|ref|XP_003544691.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 534
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 44/345 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++ V+++ G+ C Q+ C HR L G + +GR++
Sbjct: 213 WYPVAFSNDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 272
Query: 188 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ +GKC K+P + KI C E +G++W+W P P
Sbjct: 273 CPYHGWEYTTDGKCEKMPSTQQLNVKIKSVPCF------EREGMIWIWPGNDPPTATLPS 326
Query: 245 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
LP GF+ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 327 LLP------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLV 378
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN--------RESVDNKTGEKHYS 355
+T + G G W P + F PC++ + E + H
Sbjct: 379 NFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGRLEGQSTRECSTHLH 431
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEV 413
L +C P+ + K+ L+ R + +P +K P + + A +V +D+ + Q
Sbjct: 432 Q-LHVCLPSSKQKTRLLYRM-SLDFAPLLKHIPLMKYLWRHFAEQVLNEDLRLVVGQ--- 486
Query: 414 LLKEKVPTKELYFNL-RSIDTWVAEYRKWMDKAGHGMPYY-FGHS 456
+E++ +N + D YR W D G+ F HS
Sbjct: 487 --QERMNNGANVWNFPVAYDKLGVRYRMWRDALERGVKQLPFSHS 529
>gi|359492578|ref|XP_002284499.2| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Vitis
vinifera]
gi|302141810|emb|CBI19013.3| unnamed protein product [Vitis vinifera]
Length = 537
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 149/334 (44%), Gaps = 39/334 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++ V+++ G+ C ++ C HR L G + +GR++
Sbjct: 220 WYPVAFSTDLKDDTMIPIDCFEEPWVVFRGQDGKPGCVRNTCAHRACPLHLGSVNEGRIQ 279
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +GKC K+P + KI C+ E +G++W+W P L
Sbjct: 280 CPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCL------EQEGMIWIWPGSDPPTA--TL 331
Query: 247 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + PGF+ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 332 PSLQ--PPPGFKIHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKF 387
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYSTG 357
+T + G G W P + F PC++ + E K H
Sbjct: 388 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTKQCATHLHQ- 439
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGF-LSSQNEVL 414
L +C P+ + K+ L+ R + +P ++ P + + A KV +D+ L Q+ +L
Sbjct: 440 LHVCLPSSRDKTRLLYRM-SLDFAPVLQHIPFMQYLWRYFAEKVLNEDLRLVLGQQDRML 498
Query: 415 LKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
+ V + S D YR W D G
Sbjct: 499 MGANVWNCPV-----SYDKLGVRYRLWRDAVERG 527
>gi|449493594|ref|XP_004159366.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 371
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 155/387 (40%), Gaps = 88/387 (22%)
Query: 215 RSACVRTYEVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIH 264
+ AC Y G+VW W PN D K P+ P + +
Sbjct: 7 KKACAAVYPSTTQNGIVWFW------PNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNR 60
Query: 265 ELPYDHSILLENLMDPAHIPISHDRT------DYSAKREDAQPLGFEVTERTDRGFAGQW 318
++ Y + +L+ENLMD AH+P +H ++ RE +PL V + GF G
Sbjct: 61 DMAYGYEVLIENLMDLAHLPYAHYGIMPAPPPMKNSDRERGRPLEMVVEKLKADGFVG-- 118
Query: 319 GREKDGSMPNFLRFEAPCV---------LQNNRESVDNKT---------GEKHYSTGL-F 359
KD ++ + +F APCV +Q N ES + + E T L F
Sbjct: 119 ---KDETLRH--KFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANKPPTEISRRTFLAF 173
Query: 360 LCRPTGQGKSMLIVRFGTTGTSPWIK-LFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEK 418
C P GKS LI F W+ + P W FH + + + DM L + E+
Sbjct: 174 FCIPVSPGKSRLIWAF-PINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKY--EE 230
Query: 419 VPT----KELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGL 474
+ T K Y ++S D +V +R+W++K G + G + SLP + +P L
Sbjct: 231 IGTSNWHKACYVPVKS-DAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSL------SPRAL 283
Query: 475 VAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLST-AAALLTA 533
V RY+ HV++CK C A KA N + SL + A +
Sbjct: 284 V---------------------LERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGV 322
Query: 534 LAILGAG---RQWRAFCLVSASLCLAG 557
LA+ G + RA + A +C A
Sbjct: 323 LALTQNGVISAKVRATIFIIAIVCFAA 349
>gi|224066823|ref|XP_002302233.1| predicted protein [Populus trichocarpa]
gi|222843959|gb|EEE81506.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 147/333 (44%), Gaps = 37/333 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++ VL++ G+ C ++ C HR L G + +GR++
Sbjct: 155 WYPVAFSTDLKDDTMIPIDCFEEPWVLFRGKDGKPGCVRNTCAHRACPLHLGSVNEGRIQ 214
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +GKC K+P D K+ C E +G++W+W P L
Sbjct: 215 CPYHGWEYSTDGKCEKMPSTRLLDVKVKSLPCF------EQEGMIWIWPGSDPPAA--SL 266
Query: 247 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + PGFQ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 267 PSLQ--PPPGFQVHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWTVPSLVKF 322
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYSTG 357
+T + G G W P + F PC++ + E + H
Sbjct: 323 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECATHLHQ- 374
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVLL 415
L +C P+ + K+ L+ R + + +K FP + + A +V +D+ + Q E ++
Sbjct: 375 LHVCLPSSRQKTRLLYRM-SLDFAGVLKHFPFMHYLWKHFAEQVLNEDLRLVLGQQERMI 433
Query: 416 KEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
++ S D YR W D G
Sbjct: 434 N----GANVWNWPVSYDKLGVRYRLWRDAVERG 462
>gi|402845723|ref|ZP_10894056.1| Rieske [2Fe-2S] domain protein [Klebsiella sp. OBRC7]
gi|402270174|gb|EJU19442.1| Rieske [2Fe-2S] domain protein [Klebsiella sp. OBRC7]
Length = 340
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A R + + ++ LEN+MDP H H
Sbjct: 133 LNFPQELADRDKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|393760646|ref|ZP_10349453.1| vanillate O-demethylase oxygenase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161144|gb|EJC61211.1| vanillate O-demethylase oxygenase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 347
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 143 LGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 202
L + + + +VLY+ G+ +D CPHR LS+G+LI ++EC YHG F+ G C
Sbjct: 21 LPVRMLSENLVLYRREDGQPVALEDSCPHRRLPLSKGRLIGDQVECGYHGLTFDCSGSCT 80
Query: 203 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVS 261
K P + A+IP+SA VR+Y E G+VWVWM +P KL + P + +
Sbjct: 81 KAPGV---AQIPKSAVVRSYPCAERYGLVWVWMGDPALADPSKLIDIPEWDNPEWGVNRG 137
Query: 262 TIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGF-AGQWGR 320
EL ++ + +NL+DP+H+ H ++ + + PL +V D G +W +
Sbjct: 138 DAMELDCNYLYVTDNLLDPSHVSWVH-QSSFGSPDIIGLPLTVKV---EDNGVTVSRWSK 193
Query: 321 EKDGS--MPNFLRFEAPC 336
+ + F++FE C
Sbjct: 194 NVEVAPFYKQFVKFEGNC 211
>gi|398998322|ref|ZP_10701100.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
gi|398120749|gb|EJM10402.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
Length = 358
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY L ++ D P+G T+ ++ +VL++ GE+ +DRC HR LS G L + +
Sbjct: 25 QWYVAALGWEL-KDKPVGRTLLNKPVVLFRKANGEVAALEDRCCHRALPLSNGTLEESGI 83
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-K 245
C YHG F+ GKCV+I P KIP A V Y V E +VW+W + P PD +
Sbjct: 84 RCGYHGLLFDERGKCVEI---PGQDKIPSKAKVPAYHVSEQDQIVWIWFGSEAQPEPDCE 140
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P + + + ++ + ++ +NLMD +H+ H RT
Sbjct: 141 PPTYPVHSSGKYLFEGNVYHYNAPYQLIHDNLMDLSHLGYVHLRT 185
>gi|167584429|ref|ZP_02376817.1| Rieske (2Fe-2S) domain protein [Burkholderia ubonensis Bu]
Length = 356
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 21/228 (9%)
Query: 97 TPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK 156
+P H P + RG + +Y WYP+ + V +AP+GLT ++QIVL++
Sbjct: 3 SPAQHASPTDPVRDYLDRG---IKNY-----WYPVAPSWQV-SNAPVGLTRLNEQIVLWR 53
Query: 157 DGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS 216
D G + +DRCPHR A+LS G + G L C YHG + +G G ++P + ++ + +
Sbjct: 54 DQDGRVHALEDRCPHRGARLSLGWNLGGNLACWYHGVEVDGSGTVNRVPAV-SNCPLEGT 112
Query: 217 ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 276
CV++Y V+E G +++W P L E + + ++ ++N
Sbjct: 113 KCVKSYPVQEQAGAIFLWFGDDAHAEPAPLNLPEELVAGEYAHFLCMSNWTCNYQYAIDN 172
Query: 277 LMDPAHIPISHDRTDYSAKREDAQP----------LGFEVTERTDRGF 314
+MDP H H T +S D Q L FE T + D F
Sbjct: 173 VMDPMHGAYLH-ATSHSMAEGDKQADMRVRKTETGLVFEKTGQRDVNF 219
>gi|261342346|ref|ZP_05970204.1| iron-sulfur cluster-binding protein, Rieske family [Enterobacter
cancerogenus ATCC 35316]
gi|288314981|gb|EFC53919.1| iron-sulfur cluster-binding protein, Rieske family [Enterobacter
cancerogenus ATCC 35316]
Length = 340
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LSFPDELADTDNFSNFLCTAGWKCNYQYALENVMDPMHGTYLH 175
>gi|167723244|ref|ZP_02406480.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei DM98]
Length = 334
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T +QIVL++D +G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ P + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|224143360|ref|XP_002324929.1| predicted protein [Populus trichocarpa]
gi|222866363|gb|EEF03494.1| predicted protein [Populus trichocarpa]
Length = 68
Score = 98.2 bits (243), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/68 (69%), Positives = 52/68 (76%)
Query: 491 MHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVS 550
MHAP LANRYFR+VIHCK SA+KAFNTWK L + LTALAIL +GRQ +AF VS
Sbjct: 1 MHAPYLANRYFRNVIHCKASCSALKAFNTWKKDLYAISLALTALAILVSGRQRKAFLFVS 60
Query: 551 ASLCLAGV 558
SLCLAGV
Sbjct: 61 TSLCLAGV 68
>gi|53721920|ref|YP_110905.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei K96243]
gi|167819390|ref|ZP_02451070.1| Rieske [Burkholderia pseudomallei 91]
gi|167897836|ref|ZP_02485238.1| Rieske [Burkholderia pseudomallei 7894]
gi|167922401|ref|ZP_02509492.1| Rieske [Burkholderia pseudomallei BCC215]
gi|418395960|ref|ZP_12969861.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354a]
gi|418555670|ref|ZP_13120359.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354e]
gi|52212334|emb|CAH38358.1| Rieske [2Fe-2S] domain protein [Burkholderia pseudomallei K96243]
gi|385368180|gb|EIF73640.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354e]
gi|385373241|gb|EIF78298.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354a]
Length = 355
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T +QIVL++D +G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ P + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|423110296|ref|ZP_17097991.1| hypothetical protein HMPREF9687_03542 [Klebsiella oxytoca 10-5243]
gi|376380281|gb|EHS93029.1| hypothetical protein HMPREF9687_03542 [Klebsiella oxytoca 10-5243]
Length = 340
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + E A F ++ LEN+MDP H H
Sbjct: 133 LSFPEELANSDKFSHFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|229079696|ref|ZP_04212229.1| hypothetical protein bcere0023_23490 [Bacillus cereus Rock4-2]
gi|228703536|gb|EEL55989.1| hypothetical protein bcere0023_23490 [Bacillus cereus Rock4-2]
Length = 322
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 28/224 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + KD+ P+ V + VLY+D K E++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYAKDI-KKIPVKKRVAGKDFVLYRDEKDEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 246
C YHGW+F+ G CV+IP P + IP+ A +Y VKE G++W++ +++TPP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFAHTLSYPVKEKIGLIWIYPDNEETPPEWQTF 130
Query: 247 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
EN F F H + +E+++D AH+ H +T ++ A+ +
Sbjct: 131 HVMENTPFKLSFFHATWNAHL-----TRSIESVLDIAHLAYVHKKT--IGRKTKAESTNY 183
Query: 305 EVTERTDR------------GFAGQW----GREKDGSMPNFLRF 332
++ D+ F QW G++++ S ++ F
Sbjct: 184 KLEGTLDQFIFSNGDAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|170737946|ref|YP_001779206.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169820134|gb|ACA94716.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia MC0-3]
Length = 356
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 95 VPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 154
+ +PD H+ P + RG + +Y WYP+ + V + AP+GLT +QIVL
Sbjct: 1 MTSPDQHEAQHDPVRDYLDRG---IKNY-----WYPVAPSWQVSN-APVGLTRLSEQIVL 51
Query: 155 YKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 214
++D G++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ +
Sbjct: 52 WRDHDGKVHALEDRCPHRGARLSLGWNLGGNIACWYHGIEVDGGGTVNRVPAV-SNCPLE 110
Query: 215 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
CV++Y V+E G +++W + P L E + + ++ +
Sbjct: 111 GLKCVKSYPVEERAGAIFLWFGDEAHGEPAPLNLPEELVADEYAHFLCVSNWKCNYQYAI 170
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQ 300
+N+MDP H H T +S D Q
Sbjct: 171 DNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|421469070|ref|ZP_15917560.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|400230637|gb|EJO60400.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
Length = 373
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 90 MSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFD 149
+ S+ + +P H P + RG + +Y WYP+ + V + AP+G+T
Sbjct: 13 IRSTLMTSPAQHASQHDPVRDYLDRG---IKNY-----WYPVAPSWQVSN-APVGITRLS 63
Query: 150 QQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPA 209
+QIVL++D G++ +DRCPHR A+LS G + G + C YHG + +G G K+P + A
Sbjct: 64 EQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGGSVACWYHGIEVDGSGTVNKVPAV-A 122
Query: 210 DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYD 269
+ + + CV++Y V+E G +++W P P L + + +
Sbjct: 123 NCPLEGTKCVKSYPVEEKAGAIFLWFGDDAHPEPAPLNLPVELVADEYAHFLCMSNWKCN 182
Query: 270 HSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ ++N+MDP H H T +S D Q
Sbjct: 183 YQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 212
>gi|226502977|ref|NP_001142071.1| uncharacterized protein LOC100274228 [Zea mays]
gi|194706992|gb|ACF87580.1| unknown [Zea mays]
Length = 440
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 147/335 (43%), Gaps = 40/335 (11%)
Query: 128 WYPLYLTKDV-PDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
WYP+ + D+ D + + F++Q V+++ G C Q+ C HR L G + +GR+
Sbjct: 116 WYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRI 175
Query: 187 ECLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--P 243
+C YHGW++ +GKC K+P D +I C E +G+VW+W P P
Sbjct: 176 QCPYHGWEYSTDGKCEKMPSTKMLDVRIQSLPCF------EQEGMVWIWPGDDPPKATIP 229
Query: 244 DKLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 230 SLLP------PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSL 281
Query: 303 GFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN----NRESVDNKTGEKHYST-- 356
+T + G G W P + F PC++ + ++ + ST
Sbjct: 282 VKFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLQGKSTRQCSTHL 334
Query: 357 -GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEV 413
L +C P+ + K+ L+ R + +PW+K P + S A KV +D+ + Q E
Sbjct: 335 HQLHVCLPSSRNKTRLLYRM-SLDFAPWLKHVPLMHLLWSHFAEKVLNEDLRLVLGQQEG 393
Query: 414 LLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
++ ++ S D YR W D G
Sbjct: 394 MID----GANVWNWPVSYDKLGIRYRLWRDAVERG 424
>gi|423116230|ref|ZP_17103921.1| hypothetical protein HMPREF9689_03978 [Klebsiella oxytoca 10-5245]
gi|376378412|gb|EHS91171.1| hypothetical protein HMPREF9689_03978 [Klebsiella oxytoca 10-5245]
Length = 340
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + E A F ++ LEN+MDP H H
Sbjct: 133 LSFPEELANSDKFSHFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|228952851|ref|ZP_04114920.1| hypothetical protein bthur0006_22450 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|423424649|ref|ZP_17401680.1| hypothetical protein IE5_02338 [Bacillus cereus BAG3X2-2]
gi|423504089|ref|ZP_17480681.1| hypothetical protein IG1_01655 [Bacillus cereus HD73]
gi|449090153|ref|YP_007422594.1| hypothetical protein HD73_3495 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228806807|gb|EEM53357.1| hypothetical protein bthur0006_22450 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401113421|gb|EJQ21290.1| hypothetical protein IE5_02338 [Bacillus cereus BAG3X2-2]
gi|402457667|gb|EJV89428.1| hypothetical protein IG1_01655 [Bacillus cereus HD73]
gi|449023910|gb|AGE79073.1| hypothetical protein HD73_3495 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 322
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 28/224 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + KD+ P+ V + VLY+D K E++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYAKDI-KKIPVKKRVAGKDFVLYRDEKDEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 246
C YHGW+F+ G CV+IP P + IP+ A +Y VKE G++W++ +++TPP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFAHTLSYPVKEKIGLIWIYPDNEETPPEWQTF 130
Query: 247 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
EN F F H + +E+++D AH+ H +T ++ A+ +
Sbjct: 131 HVMENTPFKLSFFHATWNAHL-----TRSIESVLDIAHLAYVHKKT--IGRKTKAESTNY 183
Query: 305 EVTERTDR------------GFAGQW----GREKDGSMPNFLRF 332
++ D+ F QW G++++ S ++ F
Sbjct: 184 KLEGTLDQFIFSNGDAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|167894084|ref|ZP_02481486.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 7894]
Length = 124
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 183 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVV 231
+GRL+C YHGW ++G G CV IP L ++P R YE E G V
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYV 120
>gi|167578934|ref|ZP_02371808.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
thailandensis TXDOH]
Length = 480
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D T P+ L++ V APLG+ +Q +VL++D G +DRC HR A LS G++
Sbjct: 9 FDSTARGMPVALSEQVSGKAPLGVICMEQPLVLFRDASGAACAMEDRCAHRRAPLSLGRI 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
D RL+C YHGW ++G G CV IP L A ++P R Y E G VW S
Sbjct: 69 TPDCRLQCAYHGWTYDGATGACVAIPNLSASERVPVRYAARAYRTLERDGFVWACASDAR 128
Query: 240 PPN 242
P+
Sbjct: 129 APD 131
>gi|53717145|ref|YP_105952.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
mallei ATCC 23344]
gi|67643274|ref|ZP_00442021.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei GB8 horse 4]
gi|76819609|ref|YP_337644.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1710b]
gi|121598013|ref|YP_989930.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
mallei SAVP1]
gi|126442454|ref|YP_001062304.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 668]
gi|126456066|ref|YP_001075269.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1106a]
gi|134279414|ref|ZP_01766127.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 305]
gi|167000183|ref|ZP_02266003.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei PRL-20]
gi|167742215|ref|ZP_02414989.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 14]
gi|167827763|ref|ZP_02459234.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 9]
gi|167849237|ref|ZP_02474745.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei B7210]
gi|167906179|ref|ZP_02493384.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei NCTC 13177]
gi|167914502|ref|ZP_02501593.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 112]
gi|217418682|ref|ZP_03450189.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
gi|226197753|ref|ZP_03793328.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|237510278|ref|ZP_04522993.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei MSHR346]
gi|242311560|ref|ZP_04810577.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|254174319|ref|ZP_04880981.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei ATCC 10399]
gi|254189984|ref|ZP_04896493.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|254193004|ref|ZP_04899439.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
gi|254200795|ref|ZP_04907160.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei FMH]
gi|254204766|ref|ZP_04911119.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei JHU]
gi|254264054|ref|ZP_04954919.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1710a]
gi|254300250|ref|ZP_04967696.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|386864685|ref|YP_006277633.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026b]
gi|403522532|ref|YP_006658101.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
gi|418535817|ref|ZP_13101553.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026a]
gi|418543448|ref|ZP_13108804.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258a]
gi|418549984|ref|ZP_13114991.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258b]
gi|52423115|gb|AAU46685.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
mallei ATCC 23344]
gi|76584082|gb|ABA53556.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
pseudomallei 1710b]
gi|121225811|gb|ABM49342.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei SAVP1]
gi|126221945|gb|ABN85450.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 668]
gi|126229834|gb|ABN93247.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106a]
gi|134249833|gb|EBA49914.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 305]
gi|147748407|gb|EDK55482.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei FMH]
gi|147754352|gb|EDK61416.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei JHU]
gi|157809865|gb|EDO87035.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|157937661|gb|EDO93331.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|160695365|gb|EDP85335.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei ATCC 10399]
gi|169649758|gb|EDS82451.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
gi|217397986|gb|EEC38001.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
gi|225930362|gb|EEH26374.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|235002483|gb|EEP51907.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei MSHR346]
gi|238524583|gb|EEP88015.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei GB8 horse 4]
gi|242134799|gb|EES21202.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|243063833|gb|EES46019.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei PRL-20]
gi|254215056|gb|EET04441.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1710a]
gi|385352776|gb|EIF59167.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258a]
gi|385353105|gb|EIF59471.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258b]
gi|385354415|gb|EIF60684.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026a]
gi|385661813|gb|AFI69235.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026b]
gi|403077599|gb|AFR19178.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
Length = 355
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T +QIVL++D +G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ P + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|334132860|ref|ZP_08506615.1| Putative vanillate O-demethylase oxygenase subunit A
[Methyloversatilis universalis FAM5]
gi|333441770|gb|EGK69742.1| Putative vanillate O-demethylase oxygenase subunit A
[Methyloversatilis universalis FAM5]
Length = 364
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 8/210 (3%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
T+ WY L+ +VP + + D +++Y+ +G DRCPHR A L G+ I
Sbjct: 18 TDCWYVAALSSEVPAEGLFHRRILDTSVLIYRKAEGAPVALHDRCPHRFAPLHLGKRIGD 77
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
+ C YH +F+ G C P + IP++A VR++ + E G VW+WM +P
Sbjct: 78 DVVCAYHALRFDCSGACTHNPH--GNGLIPKAAKVRSFPLLEKYGFVWIWMGDAALADPA 135
Query: 245 KLPWFE--NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
KLP F + P T + ++ ++++N+MD +H I H ++ + R PL
Sbjct: 136 KLPDFGPLDDGHPNAL-AHTYMRMDVNYELIIDNVMDLSH--IDHVHSEIISTRGQLSPL 192
Query: 303 GFEVTERTDRGFAGQWGREKDGSMPNFLRF 332
V E D +W + +M F F
Sbjct: 193 VPAVKEGAD-SVNARWEWSQQPAMLIFANF 221
>gi|76817955|ref|YP_336975.1| putative Rieske iron-sulfur protein [Burkholderia pseudomallei
1710b]
gi|126455605|ref|YP_001074433.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1106a]
gi|167741281|ref|ZP_02414055.1| Rieske [Burkholderia pseudomallei 14]
gi|167818458|ref|ZP_02450138.1| Rieske [Burkholderia pseudomallei 91]
gi|167826843|ref|ZP_02458314.1| Rieske [Burkholderia pseudomallei 9]
gi|167848359|ref|ZP_02473867.1| Rieske [Burkholderia pseudomallei B7210]
gi|167905295|ref|ZP_02492500.1| Rieske [Burkholderia pseudomallei NCTC 13177]
gi|217422820|ref|ZP_03454322.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
gi|226194756|ref|ZP_03790348.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|242312032|ref|ZP_04811049.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|254189417|ref|ZP_04895927.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|254263186|ref|ZP_04954051.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei 1710a]
gi|403521665|ref|YP_006657234.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
gi|76582428|gb|ABA51902.1| putative rieske iron-sulfur protein [Burkholderia pseudomallei
1710b]
gi|126229373|gb|ABN92786.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106a]
gi|157937095|gb|EDO92765.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|217393728|gb|EEC33748.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
gi|225933100|gb|EEH29095.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|242135271|gb|EES21674.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|254214188|gb|EET03573.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei 1710a]
gi|403076732|gb|AFR18311.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
Length = 330
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D W P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 240 PP 241
PP
Sbjct: 129 PP 130
>gi|126442410|ref|YP_001061494.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 668]
gi|126221901|gb|ABN85406.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 668]
Length = 330
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D W P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 240 PP 241
PP
Sbjct: 129 PP 130
>gi|73539609|ref|YP_299976.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|159464211|ref|XP_001690335.1| hypothetical protein CHLREDRAFT_114479 [Chlamydomonas reinhardtii]
gi|72122946|gb|AAZ65132.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
gi|158279835|gb|EDP05594.1| predicted protein [Chlamydomonas reinhardtii]
Length = 349
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 21/172 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + D DA + TV D+ + +Y+ G L +DRC HRLA LS G+ L
Sbjct: 7 WYMVGWSTDFTADAIVPFTVMDEPLAIYRKTDGSLAALEDRCCHRLAPLSVGRKEGDELR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK-------TP 240
C+YHG +F +G+C ++ P +I CVR Y + E G WVWM + P
Sbjct: 67 CMYHGLKFAADGRCTEV---PGQDRISPRVCVRAYPIVEKHGAAWVWMGEAEKADEALVP 123
Query: 241 P--NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P PD W + ++ + ++ +NL+D +H P H+ T
Sbjct: 124 PIIGPDNAEWAMQ---------CSTFDMDVNAELISDNLLDLSHAPFVHEAT 166
>gi|237509499|ref|ZP_04522214.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei MSHR346]
gi|254299474|ref|ZP_04966923.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|157809462|gb|EDO86632.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|235001704|gb|EEP51128.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei MSHR346]
Length = 330
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D W P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 240 PP 241
PP
Sbjct: 129 PP 130
>gi|170721765|ref|YP_001749453.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida W619]
gi|169759768|gb|ACA73084.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida W619]
Length = 341
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRL 186
WY L L DD P T+ + +VL+K G +DRC HR AKLS+G + DG +
Sbjct: 13 WYAL-LPMAALDDGPKPFTLLGEALVLWKRPDGTPVAMRDRCCHRTAKLSKGFVSEDGNI 71
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+++ G CVKIPQ P A IP A V+ Y +E G WV + P PD
Sbjct: 72 ACGYHGWEYDCSGACVKIPQNPTGA-IPPGAAVKAYHCQEKYGYAWVALDDPLQPIPD-- 128
Query: 247 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
F PG++ + +E + ++EN D +H H + ++ + QP +E
Sbjct: 129 --FPEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVH-KANFGLF-DQPQPASYE 184
Query: 306 VTERTDRGFAGQ 317
E TD GF +
Sbjct: 185 FRE-TDYGFEAE 195
>gi|421748983|ref|ZP_16186499.1| Rieske 2Fe-2S family protein [Cupriavidus necator HPC(L)]
gi|409772226|gb|EKN54294.1| Rieske 2Fe-2S family protein [Cupriavidus necator HPC(L)]
Length = 345
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 19/203 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID-GRL 186
WY L + + DD P T+ + +VL+K G L +DRC HR A+LS+G + + G +
Sbjct: 13 WYAL-MPVSMLDDGPKPFTLLGEDLVLWKRSDGSLAALRDRCCHRTARLSKGWVNERGDI 71
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+++ G CV+IPQ P D ++P A V Y +E G VWV + P PD
Sbjct: 72 VCGYHGWEYDCSGACVRIPQAP-DNRVPAGARVPAYRAEEKYGYVWVALDDPLQPIPD-- 128
Query: 247 PWFENFARPGFQDVSTIHELPYDHSIL--LENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
F P ++ + +E ++ S L +EN D +H H R ++ + +P +
Sbjct: 129 --FPEEGDPAYRRILQYYER-WNTSPLRVMENAFDNSHFSFVH-RANFGIA-DQPKPEKY 183
Query: 305 EVTERTDRGFAGQWGREKDGSMP 327
E+T+R +WG E + +P
Sbjct: 184 ELTQR-------EWGFEAETLVP 199
>gi|124383222|ref|YP_001024411.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
mallei NCTC 10229]
gi|126446690|ref|YP_001078164.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
mallei NCTC 10247]
gi|254357015|ref|ZP_04973290.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei 2002721280]
gi|124291242|gb|ABN00512.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei NCTC 10229]
gi|126239544|gb|ABO02656.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei NCTC 10247]
gi|148026042|gb|EDK84165.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei 2002721280]
Length = 355
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T +QIVL++D +G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGVGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ P + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|420249027|ref|ZP_14752278.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398064681|gb|EJL56358.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 362
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V +AP+GLT +QIVL++D G++ +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-GNAPIGLTRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGNRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G +P + A + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGIEVDGSGTVQAVPAVSA-CPLEGQKCVKSYPVEEHAGAIFLWFGDDAHKEPTSLA 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPEELVGAEYSQFLCVSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|336247113|ref|YP_004590823.1| 3-phenylpropionate dioxygenase subunit alpha [Enterobacter
aerogenes KCTC 2190]
gi|444354768|ref|YP_007390912.1| Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
[Enterobacter aerogenes EA1509E]
gi|334733169|gb|AEG95544.1| 3-phenylpropionate dioxygenase, alpha subunit [Enterobacter
aerogenes KCTC 2190]
gi|443905598|emb|CCG33372.1| Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
[Enterobacter aerogenes EA1509E]
Length = 340
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LSFPEELANHEKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|167921537|ref|ZP_02508628.1| Rieske [Burkholderia pseudomallei BCC215]
Length = 330
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D W P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 240 PP 241
PP
Sbjct: 129 PP 130
>gi|83718255|ref|YP_440309.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis E264]
gi|167617039|ref|ZP_02385670.1| Rieske [Burkholderia thailandensis Bt4]
gi|257140941|ref|ZP_05589203.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis E264]
gi|83652080|gb|ABC36144.1| Rieske [2Fe-2S] domain protein [Burkholderia thailandensis E264]
Length = 330
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D W P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 240 PP 241
PP
Sbjct: 129 PP 130
>gi|167722287|ref|ZP_02405523.1| Rieske [Burkholderia pseudomallei DM98]
gi|254195546|ref|ZP_04901974.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
gi|169652293|gb|EDS84986.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
Length = 330
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D W P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 240 PP 241
PP
Sbjct: 129 PP 130
>gi|15644093|ref|NP_229142.1| oxidase-related protein [Thermotoga maritima MSB8]
gi|4981900|gb|AAD36412.1|AE001788_7 oxidase-related protein [Thermotoga maritima MSB8]
Length = 321
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 36/273 (13%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ + + +V P+G+ + +V ++D G++ +D C HR A+LS G++I+ R++
Sbjct: 2 WFAVLSSNEVRR-KPVGVRRLGRDLVFWRDSLGKVYALEDFCVHRRARLSAGKVINDRIQ 60
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG++++G G+ IP L + K+P V +Y V E ++W+W + P+K P
Sbjct: 61 CPFHGFEYDGNGRVRLIPALGKNYKVPDRFRVNSYPVYEKNNIIWLWSGEG---EPEKEP 117
Query: 248 WF-----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRE----- 297
F E+FA F+++ + P+ ++ EN +D H+P H T R
Sbjct: 118 KFFDDIDEDFAYAEFRELWNV---PFPRAV--ENQLDVMHLPFVHRTTIGRGNRTLVHGP 172
Query: 298 -----DAQPLGFEVTERTDRGFAGQWGREKDGSMPN-FLRFEAPCVLQNNRESVDNKTGE 351
D F V DRG + E G +L F P + QN+ E
Sbjct: 173 VVKWIDEDSFIFYVFNEVDRGQRVKRPEELSGEESRVYLEFIFPNLWQNH-------ISE 225
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRF--GTTGTSP 382
F+ P + K+M+ +RF TG P
Sbjct: 226 GTRVVAFFV--PVDRQKTMIYLRFYVKMTGLKP 256
>gi|424776775|ref|ZP_18203751.1| vanillate O-demethylase oxygenase [Alcaligenes sp. HPC1271]
gi|422888068|gb|EKU30460.1| vanillate O-demethylase oxygenase [Alcaligenes sp. HPC1271]
Length = 347
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
+ + + +VLY+ G+ +D CPHR LS+G+LI ++EC YHG F+ G C K
Sbjct: 23 VRMLSENLVLYRREDGQPVALEDSCPHRRLPLSKGRLIGDQVECGYHGLTFDCSGSCTKA 82
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 263
P + A+IPRSA VR+Y E G+VWVWM +P KL + P + +
Sbjct: 83 PGV---AQIPRSAVVRSYPCTERFGLVWVWMGDPELADPSKLIDIPEWENPEWGVNRGDA 139
Query: 264 HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGF-AGQWGREK 322
EL ++ + +NL+DP+H+ H ++ + + PL +V D G +W +
Sbjct: 140 MELDCNYLYVTDNLLDPSHVSWVH-QSSFGSPDIIGLPLTVKV---EDNGVTVSRWSKNV 195
Query: 323 DGS--MPNFLRFEAPC 336
+ + F++FE C
Sbjct: 196 EVAPFYKQFVKFEGNC 211
>gi|163851145|ref|YP_001639188.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
extorquens PA1]
gi|163662750|gb|ABY30117.1| Rieske (2Fe-2S) domain protein [Methylobacterium extorquens PA1]
Length = 357
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
W WY D+ D P T+ ++IVL+ DG+GE DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDLAD-GPKPFTLMGERIVLFLDGEGEPAAMMDRCCHRTARLSKGWCED 67
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
G + C YHGW ++ G +IPQ + +PR A V++Y G WV +++
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLAEPYA--- 123
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPL 302
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -TIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 303 GFEVTERTDRGFAGQ 317
+E+TE T+ GF +
Sbjct: 181 KYEITE-TEYGFEAE 194
>gi|134280663|ref|ZP_01767373.1| putative rieske iron-sulfur protein [Burkholderia pseudomallei 305]
gi|134247685|gb|EBA47769.1| putative rieske iron-sulfur protein [Burkholderia pseudomallei 305]
Length = 330
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D W P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 240 PP 241
PP
Sbjct: 129 PP 130
>gi|338173749|gb|AEI83421.1| chlorophyllide a oxygenase [Camellia sinensis]
Length = 536
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 142/332 (42%), Gaps = 35/332 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++ V+++ G+ C Q+ C HR L G + +GR++
Sbjct: 219 WYPVAFSTDLKDDTMVPIDCFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGPINEGRIQ 278
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +GKC K+P +AKI C E +G++W+W P +
Sbjct: 279 CPYHGWEYSTDGKCKKMPSTRLVNAKIKALPCF------EQEGMIWIWPGNDAPTA--TI 330
Query: 247 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + PGF+ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 331 PSLQ--PPPGFKIHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLAKF 386
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPC-VLQNNRESVDNKTGEKHYSTGLFLCRPT 364
+T + G G W P + F PC VL S ++ S+ L +
Sbjct: 387 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISSPGNWKDRALSSALRIFTNF 439
Query: 365 GQGKSMLIVRFGTTGTSPWIKL-------FPDWYFHQSASKVFEQDMGFLSSQNEVLLKE 417
L R G WI L F + + A KV +D+ + Q + +L
Sbjct: 440 MYAYHHLDRRQGYCTECRWILLPMLKHVPFMQYLWKYFAEKVLNEDLRIVIGQQDRML-- 497
Query: 418 KVPTKELYFNL-RSIDTWVAEYRKWMDKAGHG 448
+NL S D YR W D G
Sbjct: 498 ---NGANVWNLPVSYDKLGVRYRLWRDAVDQG 526
>gi|330820227|ref|YP_004349089.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
gladioli BSR3]
gi|327372222|gb|AEA63577.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
gladioli BSR3]
Length = 369
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+GLT +QIVL++D +G + +DRCPHR A+LS G + +
Sbjct: 29 WYPVAPSWQV-SSAPVGLTRLSEQIVLWRDREGRVHALEDRCPHRGARLSLGWNLGDHVA 87
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G ++P + A+ + ACV++Y V+E G +++W + P L
Sbjct: 88 CWYHGIEVDGSGTVARVPAV-ANCPLEGQACVKSYPVEERAGAIFLWFGDEAHREPAPLV 146
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
E + + + ++ ++N+MDP H H + A+ + + T
Sbjct: 147 LPEELSSDAYAHFVCVSNWTCNYQYAIDNVMDPMHGAYLHASSHSMAEGDKQADMRVRKT 206
Query: 308 E 308
E
Sbjct: 207 E 207
>gi|320160752|ref|YP_004173976.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
gi|319994605|dbj|BAJ63376.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
Length = 327
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 142/311 (45%), Gaps = 55/311 (17%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + +++V P+G +++V ++ G++ C DRCPH A LS G++++ L
Sbjct: 5 QWYVVLESREVRVGRPVGAVRMGEKMVFWRRKDGKVVCMADRCPHLGASLSRGKVVEDHL 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C +H ++F+ G CV IP L + P++ +++Y E+ G +W++ + P + L
Sbjct: 65 ACPFHAFEFDPGGACVYIPALGRNTPPPKAMRIKSYPTYEAHGFIWIYWGE---PQGELL 121
Query: 247 P--WF---ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ- 300
P +F E F+ G++ + +H +S ++EN +D H+P H T ++
Sbjct: 122 PPKFFDIDETFSYAGYRQLWPVH-----YSRMVENQLDVMHLPHVHTDTIGRGRKVVVDG 176
Query: 301 PLGFEVTERTDRGFAGQW--GREKDG------------SMPNFLRFEAPCVLQNNRESVD 346
PL R + G W R+ DG S P FL F P + Q NR S D
Sbjct: 177 PLA-----RVEDGVLKVWVFNRKDDGTPPRRADELPTPSRPPFLEFIFPNLWQ-NRISSD 230
Query: 347 NK-------TGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKV 399
+ E+H G+F R + IVR P ++ +W + +
Sbjct: 231 YRIVVAFVPVDEEH---GMFYLR-----QYQRIVRI------PILREIVNWIGVLGSHHI 276
Query: 400 FEQDMGFLSSQ 410
EQD +S+Q
Sbjct: 277 AEQDRRVVSTQ 287
>gi|425074949|ref|ZP_18478052.1| hypothetical protein HMPREF1305_00831 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425085585|ref|ZP_18488678.1| hypothetical protein HMPREF1307_01005 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405595152|gb|EKB68542.1| hypothetical protein HMPREF1305_00831 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405607617|gb|EKB80586.1| hypothetical protein HMPREF1307_01005 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 340
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LSFPEELADHKKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|413960602|ref|ZP_11399831.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia sp.
SJ98]
gi|413931316|gb|EKS70602.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia sp.
SJ98]
Length = 352
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V + AP+GLT QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 25 WYPVAPSWQVAN-APIGLTRLGDQIVLWRDNEGKVHALEDRCPHRGARLSLGWNLGGSVA 83
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G K+P + A + CV++Y V+E G +++W P L
Sbjct: 84 CWYHGIEVDGSGTVQKVPAVSA-CPLEGQKCVKSYPVEERAGAIFLWFGDDANKEPAPLV 142
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 143 LPEELVAEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 194
>gi|385722324|gb|AFI73228.1| chlorophyllide a oxygenase [Hordeum vulgare]
gi|385722326|gb|AFI73229.1| chlorophyllide a oxygenase [Hordeum vulgare subsp. vulgare]
gi|385722328|gb|AFI73230.1| chlorophyllide a oxygenase [Hordeum vulgare]
Length = 550
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 144/335 (42%), Gaps = 39/335 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ C Q+ C HR L G + +GR+
Sbjct: 229 WYPVAFSGDLKDDTMVPIDCFEEQWVIFRGKDKRPGCVQNTCAHRACPLDLGSVNEGRIT 288
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW++ +GKC K+P + +R E +G+VW+W TP P
Sbjct: 289 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRALPCFEQEGMVWIWPGDDTP-----TP 338
Query: 248 WFENFARP-GFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+ P GF + ELP +H +LL+NL+D AH P +H T AK
Sbjct: 339 TIPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSFVKF 396
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYSTG 357
+T + G G W P + F PC++ + E + H
Sbjct: 397 LTPTS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCATHLHQ- 448
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEVLL 415
L +C P+ K+ L+ R + +PW+K P + S A KV +D+ + Q
Sbjct: 449 LHVCLPSSTNKTRLLYRM-SLDFAPWMKHMPFMHLLWSHFAEKVLNEDLRLVLGQ----- 502
Query: 416 KEKVPTKELYFNL-RSIDTWVAEYRKWMDKAGHGM 449
++++ +N S D YR W D G+
Sbjct: 503 QDRMNNGANVWNWPVSYDKLGIRYRLWRDAVERGV 537
>gi|399076244|ref|ZP_10751897.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398037577|gb|EJL30762.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 340
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 14/224 (6%)
Query: 146 TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 205
T D +VLY++ + ++ DRCPHR A LS GQ+++GRL C YHG F+ G CV
Sbjct: 25 TFLDIPVVLYRNAEAKVIALHDRCPHRFAPLSMGQIVEGRLRCGYHGLSFDEAGACVHSL 84
Query: 206 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE 265
P++A VR + V E +VW+WM P + +P + +
Sbjct: 85 M---STVAPKAAKVRAFAVHEQDKMVWIWMGDAAPGDTAAIPRLPHHTDEVMSCNFGLTT 141
Query: 266 LPYDHSILLENLMDPAHIPISH---DRTDYSAK----REDAQPLGFEVTERTDRGFAGQW 318
D+ +L +NLMD H + H DY AK ED Q + V E FA
Sbjct: 142 AKADYRLLSDNLMDLTHTALLHPAFGGLDYIAKTKSWEEDGQVVSDHVVEDMPAFFAP-- 199
Query: 319 GREKDGSMPNFLRFEAPC--VLQNNRESVDNKTGEKHYSTGLFL 360
G + + +R+ AP +L++ +D+ E + + L
Sbjct: 200 GTDLKVHNRDTIRWIAPATHILESRITPMDDANWETYIPSAHIL 243
>gi|326500120|dbj|BAJ90895.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 550
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 144/336 (42%), Gaps = 41/336 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ C Q+ C HR L G + +GR+
Sbjct: 229 WYPVAFSGDLKDDTMVPIDCFEEQWVIFRGKDKRPGCVQNTCAHRACPLDLGSVNEGRIT 288
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK--TPPNPDK 245
C YHGW++ +GKC K+P + +R E +G+VW+W TP P
Sbjct: 289 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRALPCFEQEGMVWIWPGDDTPTPTIPSL 343
Query: 246 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
LP GF + ELP +H +LL+NL+D AH P +H T AK
Sbjct: 344 LP------LSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSFVK 395
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYST 356
+T + G G W P + F PC++ + E + H
Sbjct: 396 FLTPTS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCATHLHQ 448
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEVL 414
L +C P+ K+ L+ R + +PW+K P + S A KV +D+ + Q
Sbjct: 449 -LHVCLPSSTNKTRLLYRM-SLDFAPWMKHMPFMHLLWSHFAEKVLNEDLRLVLGQ---- 502
Query: 415 LKEKVPTKELYFNL-RSIDTWVAEYRKWMDKAGHGM 449
++++ +N S D YR W D G+
Sbjct: 503 -QDRMNNGANVWNWPVSYDKLGIRYRLWRDAVERGV 537
>gi|414878608|tpg|DAA55739.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 538
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 147/335 (43%), Gaps = 40/335 (11%)
Query: 128 WYPLYLTKDVPD-DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
WYP+ + D+ D + + F++Q V+++ G C Q+ C HR L G + +GR+
Sbjct: 214 WYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRI 273
Query: 187 ECLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--P 243
+C YHGW++ +GKC K+P D +I C E +G+VW+W P P
Sbjct: 274 QCPYHGWEYSTDGKCEKMPSTKMLDVRIQSLPCF------EQEGMVWIWPGDDPPKATIP 327
Query: 244 DKLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 328 SLLP------PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSL 379
Query: 303 GFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN----NRESVDNKTGEKHYST-- 356
+T + G G W P + F PC++ + ++ + ST
Sbjct: 380 VKFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLQGKSTRQCSTHL 432
Query: 357 -GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQS--ASKVFEQDMGFLSSQNEV 413
L +C P+ + K+ L+ R + +PW+K P + S A KV +D+ + Q E
Sbjct: 433 HQLHVCLPSSRNKTRLLYRM-SLDFAPWLKHVPLMHLLWSHFAEKVLNEDLRLVLGQQEG 491
Query: 414 LLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
++ ++ S D YR W D G
Sbjct: 492 MID----GANVWNWPVSYDKLGIRYRLWRDAVERG 522
>gi|167839497|ref|ZP_02466181.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis MSMB43]
gi|424905101|ref|ZP_18328608.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis MSMB43]
gi|390929495|gb|EIP86898.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis MSMB43]
Length = 355
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T +QIVL++D +G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDRQGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + ++ + +CV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQSCVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ P + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPDELVGPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|449465447|ref|XP_004150439.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
sativus]
gi|449513335|ref|XP_004164299.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
sativus]
Length = 534
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 145/333 (43%), Gaps = 37/333 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ +D + F++ VL++ G C ++ C HR L G + DGR++
Sbjct: 217 WYPVAFSSDLKNDIMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPLHLGSVNDGRVQ 276
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +GKC K+P + KI C E +G++WVW P L
Sbjct: 277 CPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCF------EKEGMIWVWPGNDPPAA--NL 328
Query: 247 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + PGFQ + E+P +H +LL+NL+D AH P +H T AK L
Sbjct: 329 PSLK--PPPGFQIHAELVIEIPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKF 384
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYSTG 357
+T + G G W P + F PC++ + E + H
Sbjct: 385 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLHQ- 436
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVLL 415
L +C P+ + K+ L+ R + +P +K P + + A +V +D+ + Q E +
Sbjct: 437 LHVCLPSTRQKTRLLYRM-SLDFAPVLKQIPFMHYLWRHFAEQVLNEDLRLVIGQQERM- 494
Query: 416 KEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
V ++ S D YR W + G
Sbjct: 495 ---VNGANIWNMPVSYDKLGVRYRLWRNAVEEG 524
>gi|423122072|ref|ZP_17109756.1| hypothetical protein HMPREF9690_04078 [Klebsiella oxytoca 10-5246]
gi|376393380|gb|EHT06040.1| hypothetical protein HMPREF9690_04078 [Klebsiella oxytoca 10-5246]
Length = 340
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ GEL+ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGELQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W + P+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYHVQEAHGAIFLWFAATPDQQPEP 132
Query: 246 LPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LTFPEELADSDKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|115358852|ref|YP_775990.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
AMMD]
gi|115284140|gb|ABI89656.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria AMMD]
Length = 356
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 97 TPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK 156
+P H+V P RG + +Y WYP+ + V +AP+GLT +QIVL++
Sbjct: 3 SPAQHEVQHDPVRAYLDRG---IKNY-----WYPVAPSWQV-SNAPVGLTRLSEQIVLWR 53
Query: 157 DGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS 216
D +G++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ +
Sbjct: 54 DHEGKVHALEDRCPHRGARLSLGWNLGGNIACWYHGVEIDGGGTVNRVPAV-SNCPLEGM 112
Query: 217 ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 276
CV++Y V+E G +++W + P L E + + ++ ++N
Sbjct: 113 KCVKSYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVDAEYGHFLCVSNWKCNYQYAIDN 172
Query: 277 LMDPAHIPISHDRTDYSAKREDAQ 300
+MDP H H T +S D Q
Sbjct: 173 VMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|419764691|ref|ZP_14290931.1| rieske [2Fe-2S] domain protein [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397743274|gb|EJK90492.1| rieske [2Fe-2S] domain protein [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 371
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 48 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 106
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V E+ G +++W PD+
Sbjct: 107 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVHEAHGAIFLWFGVTADQQPDE 163
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + E A + + ++ LEN+MDP H H
Sbjct: 164 LSFPEELADSEKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 206
>gi|349574249|ref|ZP_08886206.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
shayeganii 871]
gi|348014197|gb|EGY53084.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
shayeganii 871]
Length = 365
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 136/324 (41%), Gaps = 34/324 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +DV P LT+FD+ V++ G G +DRCPHR A LS G++ +G++
Sbjct: 36 WYIAATERDV-RRKPQCLTLFDRHYVVFHAGNGRFAAMEDRCPHRNAPLSAGKVCNGQIR 94
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF +G+ +IP L A +P +R V + +VW+ P P LP
Sbjct: 95 CPYHGWQFAADGRLARIPALDGQA-LP---AIRIPTVHCTAQDGYVWLCPGNPATPAPLP 150
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
F + G+ + LEN +D H HD SA + +
Sbjct: 151 -FPHLNEAGWTSFRMRTRFAAPVAQCLENFLDCPHAVYVHDSWFRSATGKPVRATLRHLA 209
Query: 303 -GFEV---TERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGL 358
G EV E ++ + + + M + RF AP VD + ++ +
Sbjct: 210 DGAEVEYENEPREQSWVWRLLQNSGTDMRHTDRFIAPAT-----SRVDYRFSDRKHYIIT 264
Query: 359 FLCRPTGQGK----SMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVL 414
C P G+ + +++ R+G G P ++L F + + QD+ + Q + +
Sbjct: 265 SSCTPIGENETEVHTVISFRYGRLG--PLVRLV----FEPLSRLIIGQDVAIMQRQRDNI 318
Query: 415 L----KEKVPTKELYFNLRSIDTW 434
+E+ T E L +I W
Sbjct: 319 RRFGGRERFYTSEADLLLPAIQAW 342
>gi|124382372|ref|YP_001025916.1| (Fe-S)-binding protein [Burkholderia mallei NCTC 10229]
gi|126446785|ref|YP_001078004.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia mallei NCTC
10247]
gi|166999829|ref|ZP_02265659.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei PRL-20]
gi|238562555|ref|ZP_04610116.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei GB8 horse 4]
gi|254176289|ref|ZP_04882947.1| rieske (2Fe-2S) domain protein [Burkholderia mallei ATCC 10399]
gi|254200942|ref|ZP_04907307.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254204904|ref|ZP_04911257.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|254359023|ref|ZP_04975295.1| rieske (2Fe-2S) domain protein [Burkholderia mallei 2002721280]
gi|126239639|gb|ABO02751.1| Rieske [2Fe-2S] domain protein [Burkholderia mallei NCTC 10247]
gi|147748554|gb|EDK55629.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|147754490|gb|EDK61554.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|148028210|gb|EDK86170.1| rieske (2Fe-2S) domain protein [Burkholderia mallei 2002721280]
gi|160697331|gb|EDP87301.1| rieske (2Fe-2S) domain protein [Burkholderia mallei ATCC 10399]
gi|238522321|gb|EEP85766.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei GB8 horse 4]
gi|243064141|gb|EES46327.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei PRL-20]
gi|261826768|gb|ABM99526.2| Rieske [2Fe-2S] domain protein [Burkholderia mallei NCTC 10229]
Length = 330
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D W P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHGYKTLERDGFIWACARDAP 128
Query: 240 PP 241
PP
Sbjct: 129 PP 130
>gi|356549331|ref|XP_003543047.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 532
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 147/336 (43%), Gaps = 43/336 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++ V+++ G+ C Q+ C HR L G + +GR++
Sbjct: 213 WYPVAFSNDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 272
Query: 188 CLYHGWQFEGEGKCVKIPQL-PADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ +GKC K+P + KI C E +G++W+W P P
Sbjct: 273 CPYHGWEYTTDGKCEKMPSTRQLNVKIKSVPCF------EKEGMIWIWPGNDPPAATLPS 326
Query: 245 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
LP GF+ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 327 ILP------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLV 378
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYS 355
+T + G G W P + F PC++ + E + H
Sbjct: 379 NFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLH 431
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEV 413
L +C P+ + K+ L+ R + +P +K P + + A +V +D+ + Q
Sbjct: 432 Q-LHVCLPSSKQKTRLLYRM-SLDFAPLLKHIPLMKYLWRHFAEQVLNEDLRLVVGQ--- 486
Query: 414 LLKEKVPTKELYFNL-RSIDTWVAEYRKWMDKAGHG 448
+E++ +N + D YR W D G
Sbjct: 487 --QERMNNGANVWNFPVAYDKLGVRYRMWRDALERG 520
>gi|170698964|ref|ZP_02890023.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
gi|170136144|gb|EDT04413.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
Length = 356
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 97 TPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK 156
+P H+V P RG + +Y WYP+ + V +AP+GLT +QIVL++
Sbjct: 3 SPAQHEVQPDPVRAYLDRG---IKNY-----WYPVAPSWQV-SNAPVGLTRLSEQIVLWR 53
Query: 157 DGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS 216
D +G++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ +
Sbjct: 54 DHEGKVHALEDRCPHRGARLSLGWNLGGNIACWYHGVEIDGGGTVNRVPAV-SNCPLEGM 112
Query: 217 ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 276
CV++Y V+E G +++W + P L E + + ++ ++N
Sbjct: 113 KCVKSYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVDAEYGHFLCVSNWKCNYQYAIDN 172
Query: 277 LMDPAHIPISHDRTDYSAKREDAQ 300
+MDP H H T +S D Q
Sbjct: 173 VMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|310824238|ref|YP_003956596.1| rieske family iron-sulfur cluster-binding protein [Stigmatella
aurantiaca DW4/3-1]
gi|309397310|gb|ADO74769.1| Iron-sulfur cluster-binding protein, Rieske family [Stigmatella
aurantiaca DW4/3-1]
Length = 360
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 126/311 (40%), Gaps = 52/311 (16%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ L + ++ PL T+ +VL++ G DRCPHR LS G++++G+L+
Sbjct: 26 WFILCASGEL-GGKPLMRTLQGTPLVLFRGDGGRPAALLDRCPHRNVPLSLGRVVEGQLQ 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW+F+ G+C IP L + + ++ C +Y +E G VWV+ + P P +
Sbjct: 85 CGYHGWRFDAAGECRAIPGLTGETRA-KARCAASYATREQDGFVWVYSTPGVEPTSEPYR 143
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + PG+ V + P LEN +D H H +AK+ + +
Sbjct: 144 FPLLDA---PGYSSVRRVVRAPGSLHAALENTLDVPHTAFLHGGLFRTAKKSNEIEVVVR 200
Query: 306 ----------VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
+ E +G G+ G + +F RF P + Q V+ + G+
Sbjct: 201 RGPDRVEAEYIGEPRPKGLVGRVLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGQ---- 251
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKL----------FPDW----YFHQSASKVFE 401
+S L+V T S W L P W + A +F
Sbjct: 252 ------------ESHLMVSSAMTPVSDWDTLIYAVVTFRLPIPHWLVKPFLTPVALHIFS 299
Query: 402 QDMGFLSSQNE 412
QD L Q +
Sbjct: 300 QDSRILKQQTD 310
>gi|295700273|ref|YP_003608166.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439486|gb|ADG18655.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 352
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + + TV D+ + LY+ G L +D CPHRLA L+ G+ L
Sbjct: 8 WYMVGWSSEFSATDIVPFTVMDEPLALYRKDDGTLVALEDLCPHRLAPLTVGRKEGDELR 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C+YHG +F +G+C +I P +I CVR+Y ++E G WVWM + +P
Sbjct: 68 CMYHGLKFAADGRCTEI---PGQERISSKVCVRSYPIEEKHGAAWVWMGDPAKADVALIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
E + V + + + ++ +NL+D +H P H+ T
Sbjct: 125 PIEGPDSDTYSMVCSKFVMNGNAELVADNLLDLSHAPFIHEST 167
>gi|347528273|ref|YP_004835020.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136954|dbj|BAK66563.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 363
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++ + PL + D+ +V+Y+D + +L +DRCPHR A LS G++I+G ++
Sbjct: 9 WYASAYADEI-GERPLARKLLDRDMVIYRDAEKQLAVLEDRCPHRFAPLSGGKVIEGTIQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+ G C P + + ++A V + V E G+VW+W D LP
Sbjct: 68 CPYHGLRFDRTGACTHNPHMKGGGPL-KAASVAAWPVLEKYGIVWIWPGDPERAREDALP 126
Query: 248 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ RP F V + + + ++++NL+D +H H
Sbjct: 127 RIDFLERPKDFSVVKGLLHVRGHYELVVDNLLDLSHAAYIH 167
>gi|171317565|ref|ZP_02906753.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
gi|171097259|gb|EDT42106.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
Length = 356
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 95 VPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 154
+ +P H+V P RG + +Y WYP+ + V +AP+GLT +QIVL
Sbjct: 1 MTSPAQHEVQHDPVRAYLDRG---IKNY-----WYPVAPSWQV-SNAPVGLTRLSEQIVL 51
Query: 155 YKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 214
++D +G++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ +
Sbjct: 52 WRDHEGKVHALEDRCPHRGARLSLGWNLGGSIACWYHGVEIDGGGTVNRVPAV-SNCPLE 110
Query: 215 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 274
CV++Y V+E G +++W + P L E + + ++ +
Sbjct: 111 GMKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVDAEYGHFLCVSNWKCNYQYAI 170
Query: 275 ENLMDPAHIPISHDRTDYSAKREDAQ 300
+N+MDP H H T +S D Q
Sbjct: 171 DNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|399021599|ref|ZP_10723693.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398090943|gb|EJL81398.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 341
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 10/191 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + +D P T+ + IV++ G+ QDRC HR AKLS+G + +G +
Sbjct: 13 WYAV-MPITMLEDGPKPFTLLGENIVVWLKSPGKPAALQDRCCHRTAKLSKGFVDNGNIV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW F+ G CV++PQ AD +P A V++Y +E G VWV + + P D +P
Sbjct: 72 CGYHGWTFDCAGACVRVPQ-NADGSVPAGAMVQSYYCEERYGYVWVALEK---PLRD-IP 126
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+F PG++ + +E ++ ++EN D +H H T + +P +E+
Sbjct: 127 FFPEETTPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRGT--FGLYDQPKPEKYEI 184
Query: 307 TERTDRGFAGQ 317
E TD GF +
Sbjct: 185 NE-TDYGFEAE 194
>gi|333907699|ref|YP_004481285.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
gi|333477705|gb|AEF54366.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
Length = 344
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++D+ D PL +T+ ++ +V+Y+ G +DRCPHR A LS+G++ +
Sbjct: 8 WYCAGWSQDLLD-KPLAITLLNEPVVIYRGEDGTAIALEDRCPHRFAPLSKGKVQGNNIA 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ +G P + IP+ V+ Y V E+QGV+W+WM + + +P +
Sbjct: 67 CGYHGLVFDAKGNGTYNPH--GNGAIPKGCSVKYYPVIEAQGVIWIWMGEASQADPASII 124
Query: 248 WF-ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
E R G+ V + + ++ +NL+D +H+P H
Sbjct: 125 DIGECDKREGWTSVHGYLNVKCHYELVADNLLDLSHVPYLH 165
>gi|407709870|ref|YP_006793734.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
gi|407238553|gb|AFT88751.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 367
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V DAP+G+T QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPIGITRLGDQIVLWRDKEGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + A + CV++Y +E G V++W P L
Sbjct: 85 CWYHGIEINGSGTVTKVPAVSA-CPLEGQKCVKSYPAQEHAGAVFLWFGDDAHKEPAPLN 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPEELVGEEYASFLCMSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|152981997|ref|YP_001354194.1| hypothetical protein mma_2504 [Janthinobacterium sp. Marseille]
gi|151282074|gb|ABR90484.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 354
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 159/381 (41%), Gaps = 62/381 (16%)
Query: 87 VTDMSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLT 146
+T++S+ V H PA+ R RR W+P+ ++ D PL +T
Sbjct: 1 MTELSNIGVTMTGPHD----PANHPLYRALRRF--------WHPVAYASEL-GDTPLAVT 47
Query: 147 VFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 206
+ DQ +VL + G + RCPH+ L+ GQ++DG +EC YHGW+++ GKCV++P
Sbjct: 48 LLDQSLVLAR-LNGVVTALDSRCPHKGTSLALGQIVDGTIECPYHGWRYDDGGKCVRVPA 106
Query: 207 LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHEL 266
+ + A V Y E G++WV + + PD P FE+ Q S ++
Sbjct: 107 REELCDVLK-ASVAKYHAAEHVGIIWVALEEPLYAFPD-FPEFEDAEYNVLQGTS--YDW 162
Query: 267 PYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSM 326
LEN +D AH HD T S +P+ W ++G +
Sbjct: 163 ATSSPRRLENFVDFAHFSFVHDGTIGSRSNPRVEPVDV-------------W---REGPV 206
Query: 327 PNFLR--FEAPCV-----LQNNRESVDNKTGEKHYST--GLFLCRPTGQGKSMLIVRFGT 377
F R + P V L +++ E H + + L R GK ++ +
Sbjct: 207 LRFNRSGVKEPGVGLKKELLGITDALIEPVNEYHVTMPHTVHLKRIFPNGKRYVLFMSAS 266
Query: 378 TGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKE----LYFNL----- 428
T+ + F W+ + + D F ++EVL ++K P E L+FNL
Sbjct: 267 PVTATQTRSF--WWIARDFGTDTKHDAFFRDFEDEVLGQDK-PIIESQRPLWFNLAGGDP 323
Query: 429 -------RSIDTWVAEYRKWM 442
R D EYR+W+
Sbjct: 324 AQRETPMRGADVVTIEYRRWL 344
>gi|240138298|ref|YP_002962770.1| rieske 2Fe-2S family protein [Methylobacterium extorquens AM1]
gi|240008267|gb|ACS39493.1| rieske 2Fe-2S family protein [Methylobacterium extorquens AM1]
Length = 357
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
W WY D+ D P T+ ++IVL+ DG+GE DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDL-TDGPKPFTLMGERIVLFLDGEGEPAAMMDRCCHRTARLSKGWCED 67
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
G + C YHGW ++ G +IPQ + +PR A V++Y G WV + +
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLEEPYA--- 123
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPL 302
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -AIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 303 GFEVTERTDRGFAGQ 317
+E+TE T+ GF +
Sbjct: 181 KYEITE-TEYGFEAE 194
>gi|218529996|ref|YP_002420812.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
extorquens CM4]
gi|218522299|gb|ACK82884.1| Rieske (2Fe-2S) domain protein [Methylobacterium extorquens CM4]
Length = 357
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
W WY D+ D P T+ ++IVL+ DG+GE DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDLAD-GPKPFTLMGERIVLFLDGEGEPAAMMDRCCHRTARLSKGWCED 67
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
G + C YHGW ++ G +IPQ + +PR A V++Y G WV + +
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLEEPYA--- 123
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPL 302
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -AIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 303 GFEVTERTDRGFAGQ 317
+E+TE T+ GF +
Sbjct: 181 KYEITE-TEYGFEAE 194
>gi|254560840|ref|YP_003067935.1| rieske 2Fe-2S family protein [Methylobacterium extorquens DM4]
gi|254268118|emb|CAX23994.1| rieske 2Fe-2S family protein [Methylobacterium extorquens DM4]
Length = 357
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
W WY D+ D P T+ ++IVL+ DG+GE DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDLAD-GPKPFTLMGERIVLFLDGEGEPAAMMDRCCHRTARLSKGWCED 67
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
G + C YHGW ++ G +IPQ + +PR A V++Y G WV + +
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLEEPYA--- 123
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPL 302
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -AIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 303 GFEVTERTDRGFAGQ 317
+E+TE T+ GF +
Sbjct: 181 KYEITE-TEYGFEAE 194
>gi|377822077|ref|YP_004978448.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. YI23]
gi|357936912|gb|AET90471.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp. YI23]
Length = 331
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
EW P+ + DVPD G V D++IV+++D G +D CPHR A+LS GQ++ ++
Sbjct: 12 EWLPVCNSDDVPDGGARGFIVADERIVVWRDSLGAAHVWRDYCPHRGAQLSLGQVMRDQI 71
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+++ EG+C++IP P+ + + AC T+ +E GVVW+ + L
Sbjct: 72 VCPYHGWRYDIEGQCLRIPSNPS-LRPSKRACATTFVSEEKYGVVWMCFGEPA----HAL 126
Query: 247 PWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISH 287
+F A G + ++ + ++EN +D AH H
Sbjct: 127 DFFPEAAIAGGRRINLAPQTVKSSAPRVVENFLDMAHFSFVH 168
>gi|418061853|ref|ZP_12699685.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacterium
extorquens DSM 13060]
gi|373564597|gb|EHP90694.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacterium
extorquens DSM 13060]
Length = 357
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
W WY D+ D P T+ ++IVL+ DG+GE DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDL-TDGPKPFTLMGERIVLFLDGEGEPAAMMDRCCHRTARLSKGWCED 67
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
G + C YHGW ++ G +IPQ + +PR A V++Y G WV + +
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLEEPYA--- 123
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPL 302
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -AIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 303 GFEVTERTDRGFAGQ 317
+E+TE T+ GF +
Sbjct: 181 KYEITE-TEYGFEAE 194
>gi|443312467|ref|ZP_21042084.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
gi|442777445|gb|ELR87721.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
Length = 338
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 16/200 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP T ++ ++P + ++IV++ D G+ QDRC HR A+LS G+++DG +
Sbjct: 13 WYPAIPTTEL-SNSPNPFELLGEKIVIWLDKAGKPAAVQDRCCHRSAQLSIGKVVDGNIC 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF +G CV +PQL D IP + +++Y E G VWV + + P D LP
Sbjct: 72 CAYHGWQFNSDGACVCVPQL-KDETIPANYKIKSYRCTERYGYVWVCLEE---PLID-LP 126
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ +P ++ + +EL ++ ++EN D AH H T E P ++
Sbjct: 127 EIDEATKPDYRLLHEFYELWKCAALRVMENEFDLAHPTFVHTTT--FGSEEHPIPESMKL 184
Query: 307 TERTDRGFAGQWGREKDGSM 326
TE +WG G +
Sbjct: 185 TE-------TEWGLHVQGVL 197
>gi|78061955|ref|YP_371863.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
gi|77969840|gb|ABB11219.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
Length = 358
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 97 TPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK 156
+P+ H P RG + +Y WYP+ + V +AP+GLT +QIVL++
Sbjct: 3 SPEQHAAQHDPVRAYLDRG---IKNY-----WYPVAPSWQV-SNAPVGLTRLSEQIVLWR 53
Query: 157 DGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS 216
D G++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ + +
Sbjct: 54 DHDGKVHALEDRCPHRGARLSLGWNLGGNIACWYHGIEVDGGGTVNRVPAV-SNCPLEGT 112
Query: 217 ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 276
CV++Y V+E G +++W + P L E + + ++ ++N
Sbjct: 113 KCVKSYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVADEYGHFLCVSNWKCNYQYAIDN 172
Query: 277 LMDPAHIPISHDRTDYSAKREDAQ 300
+MDP H H T +S D Q
Sbjct: 173 VMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|413951239|gb|AFW83888.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 512
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C Q+ C HR L G + +GR++
Sbjct: 221 WYPVAFSSDLKDDTMVPIACFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 280
Query: 188 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ +GKC K+P + +I C E +G+VW+W P P
Sbjct: 281 CPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCF------EQEGMVWIWPGDDPPKATIPS 334
Query: 245 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LLP------PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLV 386
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN--------RESVDNKTGEKHYS 355
+T + G G W P + F PC++ + E + H
Sbjct: 387 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLH 439
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP 388
L +C P+ + K+ L+ R + +PW+K P
Sbjct: 440 Q-LHVCLPSSRNKTRLLYRM-SLDFAPWLKHVP 470
>gi|145590685|ref|YP_001152687.1| Rieske (2Fe-2S) domain-containing protein [Pyrobaculum arsenaticum
DSM 13514]
gi|145282453|gb|ABP50035.1| Rieske (2Fe-2S) domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 326
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 134 TKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGW 193
+++VP P+G+ +V ++D G + D CPHR A+LS G+++ G+++C YHG+
Sbjct: 8 SREVPRGRPIGVRRLGMDLVFWRDDSGRIHALLDDCPHRRARLSLGKVVGGKIQCPYHGF 67
Query: 194 QFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENF- 252
+F+G GK +KIP L AK+P + V ++ +VWVW P + +FE+
Sbjct: 68 EFDGSGKVIKIPALGRSAKLPEYLKAFSMPVYDAYDIVWVWYGGGEPRGAPR--FFEDLE 125
Query: 253 ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ-PLGFEVTE--- 308
+ + S + + ++ EN +D H+P H T R PL V +
Sbjct: 126 GLEAYSEYSEVWGVSLPRAV--ENQLDVFHLPFVHYNTIGRGGRTLVHGPLVKPVDDYSF 183
Query: 309 ------RTDRGFAGQWGREKD-GSMPNFLRFEAPCVLQN 340
+ DRG E D G + N+L F P + +N
Sbjct: 184 VVYPFNQVDRGQRPLRSSEIDVGKLRNYLWFIYPNLWEN 222
>gi|186473057|ref|YP_001860399.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia phymatum
STM815]
gi|184195389|gb|ACC73353.1| Rieske (2Fe-2S) domain protein [Burkholderia phymatum STM815]
Length = 362
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 8/185 (4%)
Query: 116 ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAK 175
ER + +Y WYP+ + V +AP+GLT +QIVL++D +G++ +DRCPHR A+
Sbjct: 19 ERGIKNY-----WYPVAPSWQV-SNAPIGLTRLSEQIVLWRDQEGKVHALEDRCPHRGAR 72
Query: 176 LSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM 235
LS G + R+ C YHG + +G G +P + A + CV++Y V+E G +++W
Sbjct: 73 LSLGWNLGNRVACWYHGIEVDGSGTVRSVPAVSA-CPLEGQKCVKSYPVEEHAGAIFLWF 131
Query: 236 SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
P L + + + ++ ++N+MDP H H T +S
Sbjct: 132 GDDAHREPTPLVLPDELVAAEYSQFLCVSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMA 190
Query: 296 REDAQ 300
D Q
Sbjct: 191 EGDKQ 195
>gi|428223044|ref|YP_007107214.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427996384|gb|AFY75079.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 331
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 4/186 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + L+K++ + P+G+T +V+Y++ E + C HR A LS G + +
Sbjct: 6 WYAICLSKEL-ESKPIGITALGSDLVIYRNSNNEPIVMSNLCVHRGASLSSGWVKQDCIV 64
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+++ +G C+KIP + IP A V TY +E G++W ++ + +P
Sbjct: 65 CPYHGWEYKSDGSCIKIPSYKENVPIPNKARVLTYPTQEKYGLIWAFIGDISESERPPIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
F + P ++ + + +++ +EN +D AH P H + E+++ ++V
Sbjct: 125 IFSEYDDPKYKKLWGDYSWDVNYTRAVENGIDIAHAPFVHAGS--FGNPEESEVENYQV- 181
Query: 308 ERTDRG 313
E++D G
Sbjct: 182 EKSDWG 187
>gi|224075992|ref|XP_002304862.1| predicted protein [Populus trichocarpa]
gi|222842294|gb|EEE79841.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 107 PASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCH 165
P E +S+GE+ +DW +WYP+ L D+ P V IVL+ D + +
Sbjct: 69 PELEVDSQGEK----FDWYAQWYPIMLVCDLDKRVPHAKRVMGLDIVLWWDRNENTWKVF 124
Query: 166 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRT 221
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ D + ACV
Sbjct: 125 GDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQASPDGPPVHTFKKACVAV 184
Query: 222 YEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHS 271
Y +VW W +++K PP +L P F ++ ++PY ++
Sbjct: 185 YPSTVHHDIVWFWPNSDPQYKDIITKKQPPTIPEL------DDPSFIKLTGCRDIPYGYA 238
Query: 272 IL 273
L
Sbjct: 239 NL 240
>gi|428210589|ref|YP_007083733.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
gi|427998970|gb|AFY79813.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
Length = 340
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 129/301 (42%), Gaps = 23/301 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + L++ + L T+ + + +++D +GE+ +DRC HR ++LS G++ DG L
Sbjct: 7 WYVVALSEQLKPKQVLSRTILGEWLAIFRDEQGEVVALRDRCMHRNSRLSRGKVCDGTLH 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW ++ G+ V +P K S +Y +E G ++V +++ N D P
Sbjct: 67 CPYHGWVYDKSGQVVAVPAEGEQFKTLASRRTHSYPTQEKDGYIYVRLAENPSLNLDPFP 126
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDYSAKRED 298
+ +PG++ V I+ + + EN +D H H + + + +R
Sbjct: 127 -MPYYGKPGWETVRVINRFRNNVTNCAENFIDIPHTASVHPGVFRKSQQKQLEMTVERRH 185
Query: 299 AQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGL 358
E T+ G+ ++ + G + + RF P N SV+ GE
Sbjct: 186 GSVFVTYRNETTNLGWYSRFLNPQGGEIYHTDRFSMP-----NVTSVEYNFGENRRFFIT 240
Query: 359 FLCRPTGQGKSMLIVRFGTTGTSPWIKL---FPDWYFHQSASKVFEQDMGFLSSQNEVLL 415
P + S L+ T W K+ F W +A + QD+ L Q EV+
Sbjct: 241 SQSIPEAE-DSTLVYTDVTFNYGIWNKIARPFVRW----TAQYIINQDIEILGIQQEVID 295
Query: 416 K 416
K
Sbjct: 296 K 296
>gi|365847880|ref|ZP_09388362.1| rieske [2Fe-2S] domain protein [Yokenella regensburgei ATCC 43003]
gi|364571736|gb|EHM49313.1| rieske [2Fe-2S] domain protein [Yokenella regensburgei ATCC 43003]
Length = 340
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGLEVAGSG---EVKDVPAVDRCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + E A + ++ LEN+MDP H H
Sbjct: 133 LSFPEELADSETYSHFLCTAAWQCNYQYALENVMDPMHGTYLH 175
>gi|197106601|ref|YP_002131978.1| phenylpropionate dioxygenase [Phenylobacterium zucineum HLK1]
gi|196480021|gb|ACG79549.1| putative phenylpropionate dioxygenase [Phenylobacterium zucineum
HLK1]
Length = 362
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-D 183
T+ WY L+ D+ P + + ++L + G+L +D CPHR A LS G+++ D
Sbjct: 21 TDIWYFAALSSDLKPGRPARYEILGEPVMLGRGPSGQLFALRDICPHRAAPLSAGRIVRD 80
Query: 184 GR---LECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKT 239
G+ +EC YHGW+F +G C IP L AD + VR Y V ESQG+V+VW+ +
Sbjct: 81 GQGEAVECPYHGWKFGADGGCTAIPSLTADQAMDIGRIRVRRYPVAESQGLVFVWIGRDA 140
Query: 240 PPNPDKLPWFENFARPGFQDV---------STIHELPYDHSILLENLMDPAHIPISHDRT 290
PD+ P P F V + + DH+++ LMDPAH P H +
Sbjct: 141 ASEPDQPP-------PVFPGVVGGPPKLVDRMVFDAHIDHAVV--GLMDPAHGPYVHQQW 191
Query: 291 DY-SAKREDAQPLGFEVTERTDRGFA 315
+ SAK + + FE E GFA
Sbjct: 192 WWRSAKSQHEKAKRFEPRE---AGFA 214
>gi|312282087|dbj|BAJ33909.1| unnamed protein product [Thellungiella halophila]
Length = 534
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 153/339 (45%), Gaps = 40/339 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ T D+ D + + F+Q V+++ G+ C ++ C HR L G + +GR++
Sbjct: 219 WYPVAFTADLKHDTMVPIDCFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVKEGRIQ 278
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +GKC K+P + KI C+ E G++WVW PP+P L
Sbjct: 279 CPYHGWEYSTDGKCTKMPSTKLLNVKIKSIPCL------EQDGMIWVWPGDD-PPSP-TL 330
Query: 247 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + + GF + +LP +H +LL+NL+D AH P +H T AK L
Sbjct: 331 PSLQPPS--GFVIHAELVMDLPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKF 386
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYSTG 357
+T + G G W P + F+ PC++ + E K H
Sbjct: 387 LTPSS--GLQGYW-----DPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTKQCATHLHQ- 438
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVLL 415
L +C P+ + K+ L+ R + +P +K P + + A +V +D+ + Q E +L
Sbjct: 439 LHVCLPSSRNKTRLLYRM-SLDFAPILKNVPFMEHLWRHFAEQVLNEDLRLVLGQQERML 497
Query: 416 KEKVPTKELYFNLRSIDTWVAEYRKW---MDKAGHGMPY 451
++ + D YR W +D+ +P+
Sbjct: 498 N----GANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 532
>gi|390572748|ref|ZP_10252944.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
gi|389935349|gb|EIM97281.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
Length = 362
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V +AP+GLT +QIVL++D G++ +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-GNAPIGLTRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGNRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G +P + A + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGIEVDGSGTVQAVPAVSA-CPLEGQKCVKSYPVEEHAGAIFLWFGDDAHKEPTPLA 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPEELVGEEYSQFLCVSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|413951240|gb|AFW83889.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 487
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++Q V+++ G C Q+ C HR L G + +GR++
Sbjct: 221 WYPVAFSSDLKDDTMVPIACFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 280
Query: 188 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ +GKC K+P + +I C E +G+VW+W P P
Sbjct: 281 CPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCF------EQEGMVWIWPGDDPPKATIPS 334
Query: 245 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LLP------PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLV 386
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN--------RESVDNKTGEKHYS 355
+T + G G W P + F PC++ + E + H
Sbjct: 387 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLH 439
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP 388
L +C P+ + K+ L+ R + +PW+K P
Sbjct: 440 Q-LHVCLPSSRNKTRLLYRM-SLDFAPWLKHVP 470
>gi|167572693|ref|ZP_02365567.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
oklahomensis C6786]
Length = 338
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+T +QIVL++D +G++ +DRCPHR A+LS G + +
Sbjct: 26 WYPVAPSWQV-SSAPVGMTRLSEQIVLWRDQQGQVHALEDRCPHRGARLSLGWNLGDHVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ P + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|282897695|ref|ZP_06305694.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
gi|281197374|gb|EFA72271.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
Length = 360
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 143/345 (41%), Gaps = 43/345 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + + + I+L +D G++ +D CPHR LS G+ ++E
Sbjct: 19 WYYALPSSQLKTGKMVSRVLLREPILLTRDKNGQVFAIEDICPHRAVPLSCGRFDGEQVE 78
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPP----- 241
C YHGW+F+ +GKC +IP L + I S V++Y V E+QG +W++M K
Sbjct: 79 CCYHGWRFDSQGKCTQIPSLLPEQSIDLSKFNVKSYPVYETQGNIWIYMYDKEGASINAE 138
Query: 242 --NPDKLPWFENFARPGFQDVSTIHELP--YDHSILLENLMDPAHIPISHD-------RT 290
N ++P F N D+ + + P DH++ LMDPAH P H +
Sbjct: 139 IGNIPQIPGFSNIE----PDLVEVMKFPCFIDHAV--TGLMDPAHSPYVHQVWWWRSGKL 192
Query: 291 DYSAKREDAQPLGFEVTERTDRGFAGQWGREK---DGSMPNF-LRFEAPCVLQNNRESVD 346
K+ D GF V R G +P + F P V ++
Sbjct: 193 HEEVKQFDPSDYGFTVRRHKLSNNTENMSRLYWLVGGGIPEVEISFRLPGV------RIE 246
Query: 347 NKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDW-------YFHQSASKV 399
T KH L P ++ V F G W+K+F + +Q + V
Sbjct: 247 EITFGKHRVCNLTAVTPISDTETE--VNFVLYGIPNWLKIFTPLIQILTRKFLYQDRNVV 304
Query: 400 FEQDMGFLSSQNEVLLKEKVPTKELYFNL-RSIDTWVAEYRKWMD 443
+Q +G + L+K+ + YF L R AE R++++
Sbjct: 305 EKQQIGLQYNPILRLIKDSDMQAQWYFQLKREFSRAAAENREFVN 349
>gi|302847458|ref|XP_002955263.1| hypothetical protein VOLCADRAFT_34353 [Volvox carteri f.
nagariensis]
gi|300259335|gb|EFJ43563.1| hypothetical protein VOLCADRAFT_34353 [Volvox carteri f.
nagariensis]
Length = 129
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
++W ++WYP+ + P T+ Q +VL++DG G R +D CPHRLA LSEG++
Sbjct: 2 FNWFQQWYPVAALDALDPTRPHAFTLLGQDLVLWRDGSGRWRAFKDACPHRLAPLSEGRI 61
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWVW 234
DG L C YH W+F+G G C +P D + PRS C +Y E G++WVW
Sbjct: 62 EKDGTLLCAYHAWRFDGSGACTAMPFCSPDDPGRRNPRS-CAVSYPALERGGLLWVW 117
>gi|421172490|ref|ZP_15630260.1| vanillate monooxygenase [Pseudomonas aeruginosa CI27]
gi|404537756|gb|EKA47339.1| vanillate monooxygenase [Pseudomonas aeruginosa CI27]
Length = 361
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY L+ ++ D P+G T+ ++ +VL++ G G++ +DRC HR LS G L + +
Sbjct: 30 QWYVAALSWEL-KDKPVGRTLLNKPVVLFRMGDGQVAALEDRCCHRALPLSNGTLEEAGV 88
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-K 245
C YHG F GKCV+I P KIP A V Y V+E +VW+W PD +
Sbjct: 89 RCGYHGLLFNQAGKCVEI---PGQDKIPSKAKVPAYHVRERDQIVWIWFGADAASEPDCE 145
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P +E + + +++ + ++ +NLMD +H+ H +T
Sbjct: 146 PPAYEVHSSGKYVFDGSVYHYDAPYQLIHDNLMDLSHLGYVHLKT 190
>gi|238767600|dbj|BAH66639.1| chlorophyllide a oxygenase [Nephroselmis pyriformis]
Length = 297
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 26/296 (8%)
Query: 133 LTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHG 192
T + D + F++ VL++D G+ C +D C HR LS G + +G+ C YHG
Sbjct: 4 FTSRLGKDIMVPFECFEESWVLFRDEDGKAGCIKDECAHRACPLSLGTVENGQATCAYHG 63
Query: 193 WQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENF 252
WQF G+C KIP + A+ VR E G++W+W + P + +P E
Sbjct: 64 WQFSTGGECTKIPSV--GARGCSGVGVRAMPTVEQDGMIWIWPGDEKP--AEHIPSKEVL 119
Query: 253 ARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTD 311
G + ++P +H +LLENL+D AH P +H T + A P + +
Sbjct: 120 PPAGHTLHAEIVLDVPVEHGLLLENLLDLAHAPFTHTST---FAKGWAVPELVKFSTDKV 176
Query: 312 RGFAGQWGREKDGSMPNFLRFEAPCVLQNN---------RESVDNKTGEKHYSTGLFLCR 362
R G W P + FE PC++ + V EKH L +C
Sbjct: 177 RALGGAW-----EPYPIDMSFEPPCMVLSTIGLAQPGKVDAGVRASECEKHLHQ-LHVCM 230
Query: 363 PTGQGKSMLIVRFGTTGTSPWIKLFPDWYF--HQSASKVFEQDMGFLSSQNEVLLK 416
P+G GK+ L+ R P++K P + A++V +D+ + Q + L +
Sbjct: 231 PSGAGKTRLLYRM-HLDFMPFLKYVPGMHLVWEAMANQVLGEDLRLVLGQQDRLQR 285
>gi|152971888|ref|YP_001336997.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|329998559|ref|ZP_08303156.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
gi|365140429|ref|ZP_09346484.1| hypothetical protein HMPREF1024_02515 [Klebsiella sp. 4_1_44FAA]
gi|378980596|ref|YP_005228737.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|419974929|ref|ZP_14490344.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978997|ref|ZP_14494291.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419985937|ref|ZP_14501074.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419990762|ref|ZP_14505732.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419996397|ref|ZP_14511199.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420002271|ref|ZP_14516923.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420008289|ref|ZP_14522779.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420014367|ref|ZP_14528674.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420019566|ref|ZP_14533758.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420025388|ref|ZP_14539397.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420030961|ref|ZP_14544785.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420036671|ref|ZP_14550330.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420042764|ref|ZP_14556256.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420048464|ref|ZP_14561777.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420054228|ref|ZP_14567402.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420059729|ref|ZP_14572734.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420065501|ref|ZP_14578306.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420073361|ref|ZP_14585988.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420079818|ref|ZP_14592257.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420084063|ref|ZP_14596331.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421912645|ref|ZP_16342360.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421917681|ref|ZP_16347230.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424931838|ref|ZP_18350210.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|428151582|ref|ZP_18999296.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428937985|ref|ZP_19011118.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
VA360]
gi|449049930|ref|ZP_21731526.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
hvKP1]
gi|150956737|gb|ABR78767.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|328538630|gb|EGF64729.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
gi|363653745|gb|EHL92694.1| hypothetical protein HMPREF1024_02515 [Klebsiella sp. 4_1_44FAA]
gi|364520007|gb|AEW63135.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|397344414|gb|EJJ37548.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397349817|gb|EJJ42909.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397350575|gb|EJJ43663.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397365086|gb|EJJ57712.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397366006|gb|EJJ58626.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397371107|gb|EJJ63650.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397378468|gb|EJJ70680.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397383342|gb|EJJ75483.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397388779|gb|EJJ80738.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397397392|gb|EJJ89068.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397401194|gb|EJJ92826.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397406497|gb|EJJ97917.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397415003|gb|EJK06194.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397415811|gb|EJK06991.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397423046|gb|EJK13987.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397431373|gb|EJK22049.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397435070|gb|EJK25696.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397437999|gb|EJK28529.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397443294|gb|EJK33620.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397450553|gb|EJK40655.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|407806025|gb|EKF77276.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410113624|emb|CCM84985.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410119966|emb|CCM89855.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|426306406|gb|EKV68509.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
VA360]
gi|427538456|emb|CCM95434.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|448876673|gb|EMB11656.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
hvKP1]
Length = 340
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVHEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LSFPEELADSEKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|262042582|ref|ZP_06015738.1| Rieske family iron-sulfur cluster-binding protein [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|259040016|gb|EEW41131.1| Rieske family iron-sulfur cluster-binding protein [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
Length = 340
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVHEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LSFPEELADSEKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|413962107|ref|ZP_11401335.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. SJ98]
gi|413930979|gb|EKS70266.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. SJ98]
Length = 439
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
Query: 128 WYPLYLTKDVPDDAPL-GLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
W P+ L +++P + P+ + + + VL++D +G L CPHR A L+ G+L DG L
Sbjct: 27 WQPVALAEELPSERPVKAVRLMGEDFVLFRDEQGRLGMLDRDCPHRGADLAAGRLEDGGL 86
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C +HGW F+ G+C P PA + + + R+YEV E GV++ ++ TPP
Sbjct: 87 RCAFHGWLFDVNGQCTSTPGEPAGSTLCKRIKQRSYEVIERAGVIFAYIGSGTPP---AF 143
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
P F+ FA P + + LE +DPAH H
Sbjct: 144 PHFDCFAAPDEYTFAFKGLFECNWLQALEVGIDPAHASFLH 184
>gi|167896912|ref|ZP_02484314.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 7894]
Length = 330
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+D W P+ L++ V A L + +Q +VL++D + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASSAVCAMEDRCAHRRAPLSLGRV 68
Query: 182 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W ++
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWA-CARDA 127
Query: 240 PPNPDKLPWFENFAR 254
PP + +P AR
Sbjct: 128 PPPAEAIPRAPRSAR 142
>gi|428777418|ref|YP_007169205.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428691697|gb|AFZ44991.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 354
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%), Gaps = 11/166 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ D+ + +TV+ Q I +++D G++ D CPH+ +G + L
Sbjct: 26 WYPVAWAHDLKRETVQQVTVWYQNIAIFRDEAGDVHALADACPHKGVAFHKGTVNGNHLV 85
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-----MSQKTPPN 242
C YHGW+F EGKCV IP + K+PR AC R+Y +E G++WV+ ++++ P
Sbjct: 86 CPYHGWEFNSEGKCVHIPYFSEEQKLPR-ACARSYPTQEKYGLIWVFPGEAELAEEKP-- 142
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
LP FEN P + V S+ EN MD H + D
Sbjct: 143 ILNLPEFEN---PKWLRVPVTARFNAHFSMCNENTMDVFHGYLHQD 185
>gi|427704114|ref|YP_007047336.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427347282|gb|AFY29995.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 335
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D P+ +T+ ++ +L++D G+ D C HR A L+ G + + C YHGW ++ +G
Sbjct: 20 DQPVSVTLLGRRYLLFRDTAGQAHALADYCAHRGASLARGWVEGSCVRCPYHGWSYDVDG 79
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 259
CV+IP P IP A + T+ V+E G VW++ + + +P F +PG++
Sbjct: 80 HCVRIPADPPGTAIPALARMATFPVREQSGFVWIFPGEAGRASEVPIPPFPELNQPGWRA 139
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
VS + S ++E+ +D +H P H + REDA E+
Sbjct: 140 VSGSYTWNAHFSRVVESALDTSHAPFVH--RPFFGNREDASVESLEIV 185
>gi|332286029|ref|YP_004417940.1| vanillate O-demethylase oxygenase [Pusillimonas sp. T7-7]
gi|330429982|gb|AEC21316.1| vanillate O-demethylase oxygenase, putative [Pusillimonas sp. T7-7]
Length = 343
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 144 GLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVK 203
+ V + IVLY+ G + +D CPHR LS G+L +EC YHG F+ G C
Sbjct: 22 AVKVLGEDIVLYRAQDGGVVALEDACPHRKLPLSMGRLKGDEVECGYHGLVFDCTGVCTH 81
Query: 204 IPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGF----QD 259
P + + P++A VR+Y V E G+VW+WM T NP + E++ P + D
Sbjct: 82 APGM---GRPPKAAVVRSYPVAERYGLVWIWMGDPTLANPADIIEVEHWGDPAWGLNQGD 138
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRG-FAGQW 318
+H ++ L +NL+DP+H+ H +T + + +PL T+ D G +W
Sbjct: 139 AMLVH---CNYLYLTDNLLDPSHVSWVH-QTSFGSASLIGEPLK---TQINDNGVLVSRW 191
Query: 319 GREKDGS--MPNFLRFEAPCVLQNNRE 343
R + + F++F+ C + + E
Sbjct: 192 MRNVEVAPFYAKFVKFDGRCDRKQHYE 218
>gi|443316513|ref|ZP_21045954.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783877|gb|ELR93776.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 337
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 11/189 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + + + P + + +VL+ D +G+ +DRC HR AKLS G++ GR+
Sbjct: 13 WYPV-MPRQRLAEGPQTFELLGESLVLWLDQQGQPAAVRDRCCHRTAKLSLGRVDQGRIC 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+ G CV++PQL ADA IP V Y E G VWV + P D +P
Sbjct: 72 CPYHGWEFDPSGACVRVPQLKADAAIPAHYRVAAYRCTERYGYVWVCLED---PLLD-VP 127
Query: 248 WFENFARPGFQDVSTIHELPYDHSIL--LENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+ P ++ + +E P+ + L +EN +D AH H T+ + P E
Sbjct: 128 QIDEAEDPNYRLIQEFYE-PWQCAGLRVMENELDLAHPTFVH--TETFGSEDHPTPDKLE 184
Query: 306 VTERTDRGF 314
+TE TD G
Sbjct: 185 ITE-TDWGI 192
>gi|149925020|ref|ZP_01913339.1| Rieske (2Fe-2S) protein [Plesiocystis pacifica SIR-1]
gi|149814105|gb|EDM73730.1| Rieske (2Fe-2S) protein [Plesiocystis pacifica SIR-1]
Length = 361
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
WY +KD+ PL + V + +VL++ KGE+ DRC HRLA LS G+
Sbjct: 6 NNWYVASWSKDLAVGEPLAMQVLGRPLVLWRGPKGEVSALDDRCVHRLAPLSRGRCEGAN 65
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
L C YHG F G+ V+I P +IP A R Y V E +W+WM +PD+
Sbjct: 66 LRCRYHGMVFAPGGEVVEI---PGQDEIPARARARAYPVLERHSWIWIWMGDPARADPDR 122
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+P + + + D ++ +NL+D +HI H
Sbjct: 123 IPAMVGLDDENYYLGAGTLDFAADAQLVRDNLLDFSHISYLH 164
>gi|161520532|ref|YP_001583959.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189353278|ref|YP_001948905.1| vanillate monooxygenase [Burkholderia multivorans ATCC 17616]
gi|421475922|ref|ZP_15923852.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|160344582|gb|ABX17667.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189337300|dbj|BAG46369.1| vanillate monooxygenase [Burkholderia multivorans ATCC 17616]
gi|400229377|gb|EJO59228.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 356
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V + AP+G+T +QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQVSN-APVGITRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G K+P + A+ + + CV++Y V+E G +++W P P L
Sbjct: 85 CWYHGIEVDGSGTVNKVPAV-ANCPLEGTKCVKSYPVEEKAGAIFLWFGDDAHPEPAPLN 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPVELVADEYAHFLCMSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|221196079|ref|ZP_03569126.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD2M]
gi|221202752|ref|ZP_03575771.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD2]
gi|221176686|gb|EEE09114.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD2]
gi|221182633|gb|EEE15033.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD2M]
Length = 356
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V + AP+G+T +QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQVSN-APVGITRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G K+P + A+ + + CV++Y V+E G +++W P P L
Sbjct: 85 CWYHGIEVDGSGTVNKVPAV-ANCPLEGTKCVKSYPVEEKAGAIFLWFGDDAHPEPAPLN 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPVELVADEYAHFLCMSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|377808530|ref|YP_004979722.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia sp.
YI23]
gi|357939727|gb|AET93284.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia sp.
YI23]
Length = 353
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V +AP+GLT QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GNAPIGLTRLGDQIVLWRDNEGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G K+P + A + CV++Y V+E G ++W P L
Sbjct: 85 CWYHGIEIDGSGTVQKVPAVSA-CPLEGQKCVKSYPVEEHAGATFLWFGDDANAEPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPEELVGDEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|120609826|ref|YP_969504.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax citrulli
AAC00-1]
gi|120588290|gb|ABM31730.1| Rieske (2Fe-2S) domain protein [Acidovorax citrulli AAC00-1]
Length = 373
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ D+ APL + Q +VL++ G DRCPHR A+LS G++ GRLE
Sbjct: 43 WHPVASACDL-GAAPLAAHLLGQPLVLWRGDAGRAHAFVDRCPHRGARLSLGRVEGGRLE 101
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQFEG G+CV +P LP + P ++V+E+ G++WV ++ +
Sbjct: 102 CPYHGWQFEGRGRCVHVPALP-QFQPPAGHRAGAFDVQEAHGLLWVRLAAGPQGEGEGDA 160
Query: 248 WFENFARPGFQDVS-----TIHELPYDHSI----LLENLMDPAHIPISHD 288
P F S ++ PYD + ++EN +D +H H+
Sbjct: 161 IAAGLPLPAFAAESDARLRKLNCGPYDVAASAPRIVENFLDMSHFGFVHE 210
>gi|414172135|ref|ZP_11427046.1| hypothetical protein HMPREF9695_00692 [Afipia broomeae ATCC 49717]
gi|410893810|gb|EKS41600.1| hypothetical protein HMPREF9695_00692 [Afipia broomeae ATCC 49717]
Length = 343
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
T WYP+ V + + V ++ IV+Y+ G + QD CPHRLA LS G+L
Sbjct: 5 TNAWYPVVWADRVGRELTRHV-VLEEPIVIYRLEDGSIAALQDACPHRLAPLSLGKLKGD 63
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
+EC YHG F+ GKCV I P IP +A VR+Y ++ G+VW+WM +
Sbjct: 64 NIECGYHGMTFDCSGKCVLI---PGQDVIPGNALVRSYPLQIKYGLVWLWMGDPKKADLS 120
Query: 245 KLPWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRT 290
K+ + G+ V + ++ L +NL+DPAH+ H T
Sbjct: 121 KMFHLPQYEAEGWHAVQGDTLRIECNYLSLCDNLLDPAHVTFVHTTT 167
>gi|325969786|ref|YP_004245978.1| Rieske (2Fe-2S) domain-containing protein [Vulcanisaeta moutnovskia
768-28]
gi|323708989|gb|ADY02476.1| Rieske (2Fe-2S) domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 333
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 22/228 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W + +V D PLG+ + +V ++D G++ D CPHR AKLS G+++DG ++
Sbjct: 2 WIATLSSSEVGRDRPLGVKRLNMNLVFWRDKSGKVNALLDDCPHRHAKLSLGKVVDGNIQ 61
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG++F+G G+ VKIP L +++P+ + E+ ++W+W P +
Sbjct: 62 CPYHGFEFDGSGRTVKIPALGKASEVPKYLRAFSIPTYETYDIIWIWYGNGDLSKPPR-- 119
Query: 248 WFENFARPGFQDVSTIHELPYDHSILL----ENLMDPAHIPISHDRT-DYSAKREDAQPL 302
+F++ ++ST E S+ L EN +D H+P H T K PL
Sbjct: 120 FFDD-----LDELSTYSEYSEVWSVSLPRAVENQLDVFHLPFVHYNTIGRGGKTLVHGPL 174
Query: 303 GFEVTERT---------DRGFAGQWGREKDGS-MPNFLRFEAPCVLQN 340
+ E + DRG + D S + N+L F P + +N
Sbjct: 175 VRLIDEHSFIIYPFNEVDRGQRLLRSNQIDASKLKNYLWFIYPNIWEN 222
>gi|170690844|ref|ZP_02882010.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
gi|170144093|gb|EDT12255.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
Length = 359
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V DAP+G+T QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPIGITRLGDQIVLWRDKEGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT--PPNPDK 245
C YHG + G G K+P + ++ + CV++Y +E G +++W P P K
Sbjct: 85 CWYHGIEINGGGTVTKVPAV-SNCPLEGQKCVKSYPAEEHAGAIFLWFGDDAHKEPAPLK 143
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
LP E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LP--EELVGDEYASFLCMSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|404446361|ref|ZP_11011475.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium vaccae
ATCC 25954]
gi|403650535|gb|EJZ05766.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium vaccae
ATCC 25954]
Length = 355
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ + ++D+ P T+ DQ +V+++D G R RC HR L++G+++ +
Sbjct: 19 WFVVARSQDI--STPQSATLLDQNLVVFRDSTGAARVTDRRCIHRGGNLADGKVVGDAIA 76
Query: 188 CLYHGWQFE-GEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT--PPNPD 244
C YHGWQF+ G G+C +IP LPAD +IP A ++ Y V E G VW + PNP
Sbjct: 77 CPYHGWQFDGGSGQCTRIPSLPADGRIPPKAEIKAYPVIERFGHVWTCLGDPVFDLPNPP 136
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD---------RTDYSAK 295
++ E R IH EN D AH P H+ TD K
Sbjct: 137 EIADLELEWRAA----EPIHAA-CGFMAATENFRDMAHFPFVHEPSMGDVDPVVTDLDVK 191
Query: 296 RE 297
RE
Sbjct: 192 RE 193
>gi|254183352|ref|ZP_04889944.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1655]
gi|184213885|gb|EDU10928.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1655]
Length = 355
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V AP+G+ +QIVL++D +G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGIIRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ P + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|124268855|ref|YP_001022859.1| oxidoreductase subunit alpha [Methylibium petroleiphilum PM1]
gi|124261630|gb|ABM96624.1| oxidoreductase alpha subunit [Methylibium petroleiphilum PM1]
Length = 407
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLSEGQLI-DGR 185
WY + + +G T+ +VL++ + GE+ RC H+ L+ G+L+ DG
Sbjct: 57 WYVAGTSDEFAPGQLVGQTIVGLPLVLWRPEAGGEVVAFDGRCCHKRMPLAAGKLLADGT 116
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP--NP 243
LEC YHG F+ GKCVKIP P A IP A +R Y + E G+VW+WM P P
Sbjct: 117 LECAYHGLCFDSAGKCVKIPSQPGRA-IPSRAKLRPYPIVEQDGMVWIWMGDDANPALRP 175
Query: 244 DKLPWFENFARPGFQDVSTIH-ELPYDHSILLENLMDPAHIPISHD 288
++P A P ++ + + E+P ++ +L+ENL+D +H HD
Sbjct: 176 PRIP---ELASPEWEAIRVQNAEVPTNYLLLIENLLDISHFYPLHD 218
>gi|413964128|ref|ZP_11403355.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. SJ98]
gi|413929960|gb|EKS69248.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. SJ98]
Length = 336
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
EW P+ ++DVP+ G V D++IV+++D G +D CPHR A+LS G ++ ++
Sbjct: 11 EWLPVCNSEDVPEGGARGFIVADERIVVWRDSIGAAHAWRDYCPHRGAQLSLGHVMRDQI 70
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW ++ EG+C++IP P+ + + AC T+ +E GV+W+ + L
Sbjct: 71 VCPYHGWSYDIEGQCLRIPSNPS-LRPSKRACATTFVCEEKYGVIWMCFGEPAY----AL 125
Query: 247 PWFENFARPGFQDVSTIHELPYDHS-ILLENLMDPAHIPISH 287
+F A PG + ++ + + ++EN +D AH H
Sbjct: 126 DFFPEAAIPGGRRINLAPQTVRSSAPRVVENFLDMAHFSFVH 167
>gi|220926846|ref|YP_002502148.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219951453|gb|ACL61845.1| Rieske (2Fe-2S) domain protein [Methylobacterium nodulans ORS 2060]
Length = 361
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 125/308 (40%), Gaps = 35/308 (11%)
Query: 146 TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 205
T+ D IVLY+ G++ +D C HRL LS G L + C YHG F G+C
Sbjct: 29 TICDTGIVLYRRTDGQVAALEDACWHRLLPLSLGHLHGDEVVCGYHGLIFNPAGRCTF-- 86
Query: 206 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFE-NFARPGFQDVSTIH 264
+PA I SACVR + V E ++WVWM +PD +P F N P + T +
Sbjct: 87 -MPAQETINPSACVRAFPVVERYRLIWVWMGDPALADPDTVPDFHWNSDAPWVGEGGTFY 145
Query: 265 ELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW------ 318
L D+ ++++NLMD H H S E FEVT + +W
Sbjct: 146 SLQCDYRLVIDNLMDLTHETYVHAG---SIGDEAITRNPFEVTHTDRKVTVERWMENIEP 202
Query: 319 --------GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYS-----TGLFLCRPTG 365
GR + FEAPCV+ + TG + G FL T
Sbjct: 203 PPFWARLLGRPGHVDRWQIIHFEAPCVVAGDVGVALTGTGARQGDRSQGVNGFFLAAITP 262
Query: 366 QGKSML-----IVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVP 420
+ + VR T + + + +Q V++QD L +Q + K
Sbjct: 263 ETGTSCHYFWNFVRNFRTDDAELTRSLNLAHVNQ-GRGVYDQDHDVLEAQQRAISKNP-- 319
Query: 421 TKELYFNL 428
++ ++NL
Sbjct: 320 -RQPFYNL 326
>gi|254254240|ref|ZP_04947557.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
gi|124898885|gb|EAY70728.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
Length = 356
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V + AP+G+T +QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQVSN-APVGITRLSEQIVLWRDHAGKVHALEDRCPHRGARLSLGWNLGGNIA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G K+P + ++ + + CV++Y V E G +++W P L
Sbjct: 85 CWYHGIEVDGGGTVNKVPAV-SNCPLEGTKCVKSYPVDEKAGAIFLWFGDDAHAEPAPLN 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPEELVADEYAHFLCVSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|339324216|ref|YP_004683909.1| hypothetical protein CNE_1c00590 [Cupriavidus necator N-1]
gi|338164373|gb|AEI75428.1| hypothetical protein CNE_1c00590 [Cupriavidus necator N-1]
Length = 346
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+W+P+ + D P +F + +VL+++ G DRCPHR A + G + DG L
Sbjct: 22 QWHPVLAIEQARGDGPFPARLFGRALVLWRNADG-WHAWDDRCPHRGAAFTLGAVRDGLL 80
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+F G+C + P P PR AC T+ V+E G++WV + +L
Sbjct: 81 HCGYHGWRFASGGRCTRYPAHPELVPAPR-ACATTHAVREGYGLLWVRLGGDGTEAVPEL 139
Query: 247 PWFENFARPGFQDVSTIHEL--PYDHSI----LLENLMDPAHIPISHD 288
P F P + D H + PYD + L+EN +D AH HD
Sbjct: 140 PPF-----PEYDDAECRHVVCGPYDVATSAPRLVENFLDMAHFGYVHD 182
>gi|187921880|ref|YP_001893469.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187720318|gb|ACD21540.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 430
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 128 WYPLYLTKDVP--DDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
W P ++P D P + + + +++++D G+L + CPHR A L G+ +
Sbjct: 27 WIPFLCEHELPAADAPPQRIKLLGEDLIVFRDSNGKLGMIDEFCPHRAASLFYGRNEENG 86
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C+YHGW+F+ G CV +P PA + I +++Y V+E G+ WV+M +TP +
Sbjct: 87 IRCIYHGWKFDVNGSCVDMPSEPASSTIRECMKIKSYPVREFAGLAWVYMGSETP--APE 144
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD---------YSAKR 296
LP FE P + + + LE +D AH+ H R D + +
Sbjct: 145 LPRFEWMEYPASHRHMSRWQQDCNFLQALEGEVDEAHVAFLHRRLDNPQVPKESLFGSYF 204
Query: 297 EDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFE----------APCVLQNNR 342
++ Q +++ E TD G A R P F R + AP QN+R
Sbjct: 205 QEGQAPRWKILE-TDFGLACGARRHVKNDQPFFWRVDLFLMPFYTMIAPSDDQNSR 259
>gi|423125744|ref|ZP_17113423.1| hypothetical protein HMPREF9694_02435 [Klebsiella oxytoca 10-5250]
gi|376398825|gb|EHT11448.1| hypothetical protein HMPREF9694_02435 [Klebsiella oxytoca 10-5250]
Length = 340
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A + + ++ LEN+MDP H H
Sbjct: 133 LNFPQELADSDKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|311106169|ref|YP_003979022.1| rieske [2Fe-2S] domain-containing protein 5 [Achromobacter
xylosoxidans A8]
gi|310760858|gb|ADP16307.1| rieske [2Fe-2S] domain protein 5 [Achromobacter xylosoxidans A8]
Length = 356
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++V + T+ +++Y+D G L +DRC HR A LS G+ +
Sbjct: 7 WYVAAWDQEVGANGLFSRTIIGVPVLMYRDAAGRLVALEDRCCHRGAPLSVGRREGDCVR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C+YHG +F+ G CV + PA A+IP A VRT+ V E +W+WM +P +P
Sbjct: 67 CMYHGLKFDPTGACV---EAPAQARIPPQARVRTFPVVERHRWIWIWMGDPERADPALIP 123
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT-----DYSA--KREDAQ 300
+ P ++ + ++ ++ +NL+D +H+P H T DY+A + D
Sbjct: 124 DTQWLDHPDWRSLDGYIHYDVNYLLIADNLLDFSHLPFVHPTTLGGSEDYAAVSPKVDRL 183
Query: 301 PLGFEVTERT 310
P G +T T
Sbjct: 184 PDGVRITRWT 193
>gi|423104817|ref|ZP_17092519.1| hypothetical protein HMPREF9686_03423 [Klebsiella oxytoca 10-5242]
gi|376382780|gb|EHS95513.1| hypothetical protein HMPREF9686_03423 [Klebsiella oxytoca 10-5242]
Length = 340
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVQEAHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A + + ++ LEN+MDP H H
Sbjct: 133 LNFPQELADSDKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|172063589|ref|YP_001811240.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171996106|gb|ACB67024.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MC40-6]
Length = 356
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V +AP+GLT +QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDHEGKVHALEDRCPHRGARLSLGWNLGGNIA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G ++P + ++ + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGVEIDGGGTVNRVPAV-SNCPLEGMKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLN 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
E + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPEELVDAEYGHFLCVSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|148556298|ref|YP_001263880.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501488|gb|ABQ69742.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 348
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 9/165 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRL 186
WY ++D+ A + + +V Y+D +G+ D CPHR A LS+G+L+ G +
Sbjct: 8 WYVALWSEDLHSGAIENRIILSEPVVFYRDQQGQPVALFDICPHRFAPLSKGRLLPGGGI 67
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHG +F +G C++ P +IP A V+ Y + E ++W+WM +T P+P +
Sbjct: 68 ACGYHGLEFGADGTCIRNPH---GDRIPNRAQVKRYPLVEQDSLIWIWMGDQT-PDPALI 123
Query: 247 PWFENFARPGFQDVSTIHE---LPYDHSILLENLMDPAHIPISHD 288
P ++ F P T E +P D+ ++++NL+D +HI HD
Sbjct: 124 PRYD-FLDPVNGYTVTSRETLTMPCDYRLIVDNLLDLSHINFLHD 167
>gi|444913675|ref|ZP_21233824.1| hypothetical protein D187_05994 [Cystobacter fuscus DSM 2262]
gi|444715498|gb|ELW56364.1| hypothetical protein D187_05994 [Cystobacter fuscus DSM 2262]
Length = 341
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 134/349 (38%), Gaps = 56/349 (16%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ L + ++ D PL + +VL++ +G+ DRCPHR LS G+++ G+L+
Sbjct: 8 WFILCTSSEL-GDKPLARMLQGSPLVLFRTAEGKPAALADRCPHRNVPLSLGRVVKGQLQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW+F+ G+C +P L + + +S C + +E +G VWV+ + P+ P +
Sbjct: 67 CGYHGWRFDSSGQCRAVPGLIGEPEA-KSRCATWHATREQEGFVWVYSTPGVEPSHEPYR 125
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD----------RTDYSAK 295
P + PG+ V LLEN +D H H D +
Sbjct: 126 FPLLDA---PGYSTVRRTLRAGGSLHALLENTLDVPHTSFLHGGLFRTEKQRHEIDVVVR 182
Query: 296 REDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
R Q + E G G+ G + +F RF P + Q V+ + G
Sbjct: 183 RSAHQVEAEYIGEPRPEGLVGRLLAPGGGVLQHFDRFLMPSIAQ-----VEYRLG----- 232
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKL----------FPDW----YFHQSASKVFE 401
S L+V T W L P W + A +F+
Sbjct: 233 -----------ADSHLMVTSAMTPVDDWDTLVYAVVTFRLPLPHWLIKPFITPVALHIFK 281
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMP 450
QD L Q E + + T F +D + M +AG P
Sbjct: 282 QDARILERQTETIRRFGSET----FASTEVDVLGPSILRLMRQAGREQP 326
>gi|427711932|ref|YP_007060556.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
6312]
gi|427376061|gb|AFY60013.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
6312]
Length = 351
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 137/336 (40%), Gaps = 32/336 (9%)
Query: 115 GERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLA 174
GER + Y WY + + LG T+ + I+ + G++ +D CPHR
Sbjct: 3 GERDL--YFLRNLWYYALPGQQLQPGQLLGKTLLEDPILFGRTEAGQVFAIRDLCPHRGV 60
Query: 175 KLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKI-PRSACVRTYEVKESQGVVWV 233
L G+L+ +EC YHGW+F G+C IP L A+ + CV++Y V+E QG +W+
Sbjct: 61 PLRYGRLVGTEVECPYHGWRFNPRGECTLIPGLVAEQQFNTEKICVQSYPVREVQGNIWI 120
Query: 234 WMSQK---TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD-- 288
+M K PP ++P FA + P + L+DP H+P H
Sbjct: 121 FMPAKPGDQPPPDLEIPMVPEFAPDCVAQAWQQFQFPCHVDYAISGLVDPQHVPFVHRAW 180
Query: 289 --RTDY----SAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNN 341
RT+ AK D PLGF T R R + G P + F+ P V
Sbjct: 181 WWRTNAPLFEKAKAFDPAPLGF--TMRRHRLLKTTFFYRLLGGTPEVEISFQLPGV---- 234
Query: 342 RESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKL-------FPDWYFHQ 394
++ + L P ++ + F T+PWI F + + HQ
Sbjct: 235 --RIEATFTGPNTLCNLTTMTPITATQTEVTTLF--YWTTPWITWLKPFLLPFVNTFVHQ 290
Query: 395 SASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRS 430
+ V +Q G N +L+ + Y+ ++
Sbjct: 291 DLAMVAKQQEGLRYDPNLMLVGDGDAQVRWYYQVKK 326
>gi|238059738|ref|ZP_04604447.1| oxygenase alpha subunit [Micromonospora sp. ATCC 39149]
gi|237881549|gb|EEP70377.1| oxygenase alpha subunit [Micromonospora sp. ATCC 39149]
Length = 347
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++WY +V L TV + +VLY+ G G DRC HR LSE +L
Sbjct: 6 DQWYVAAYGSEV-GRGLLARTVLGEPLVLYRTGAGAAVALADRCVHRRYPLSESRLDGDT 64
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG+ ++ G CV +P +IPR+A V +Y V E +WVW+ + +P
Sbjct: 65 IVCGYHGFTYDPTGACVFVP---GQQRIPRTARVTSYPVVEQDSFIWVWIGDRDRADPAT 121
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ-PLGF 304
+P A PG+ V + L + +L++NLMD +H H Y E A P+
Sbjct: 122 IPRAPWLADPGYAVVRGMAPLNARYGLLVDNLMDLSHETYLHG--GYIGTPEVANTPITT 179
Query: 305 EVTERTDRGFAGQWGREKDGSMPNF 329
EV E DRG D P F
Sbjct: 180 EVDE--DRGIVYVSRHMDDAECPPF 202
>gi|83944091|ref|ZP_00956547.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
gi|83844958|gb|EAP82839.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
Length = 355
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + D D+ + LT+ Q +V Y+ G++ +DRCPHRL LS+G+ I ++
Sbjct: 8 WYVAGWSTDFGDEL-VPLTLLAQNLVAYRTSDGQIAVLEDRCPHRLLPLSKGKRIGDTIQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F +G CV++ P + +P+SA V +Y V E G+V++WM +P
Sbjct: 67 CGYHGMTFGADGACVRV---PGQSNLPKSAYVDSYPVLERHGIVFIWMGDADKADPALAF 123
Query: 248 WFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDYSAKRE----- 297
+ G+ +H + ++ + ENL+DPAH+ H T +A E
Sbjct: 124 DMPELGQEGWH----VHHGDKLHIRANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVH 179
Query: 298 ---------------DAQPLGFEVTERTDRGFAGQWGR 320
DA+P+GF + GF+G R
Sbjct: 180 VKTADEVIVAWRWIRDAEPIGF---FKAFGGFSGNVDR 214
>gi|365972023|ref|YP_004953584.1| Vanillate O-demethylase oxygenase subunit [Enterobacter cloacae
EcWSU1]
gi|365750936|gb|AEW75163.1| Vanillate O-demethylase oxygenase subunit [Enterobacter cloacae
EcWSU1]
Length = 340
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPMLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA K P C R+Y V+E G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCARSYNVQEVHGAIFLWFGVTADQQPDE 132
Query: 246 LPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + + A + + ++ LEN+MDP H H
Sbjct: 133 LSFPDELADTDAYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|108799225|ref|YP_639422.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. MCS]
gi|119868341|ref|YP_938293.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. KMS]
gi|126434883|ref|YP_001070574.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. JLS]
gi|108769644|gb|ABG08366.1| Rieske (2Fe-2S) region [Mycobacterium sp. MCS]
gi|119694430|gb|ABL91503.1| Rieske (2Fe-2S) domain protein [Mycobacterium sp. KMS]
gi|126234683|gb|ABN98083.1| Rieske (2Fe-2S) domain protein [Mycobacterium sp. JLS]
Length = 352
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ + ++D+ P T+ DQ +V+++D G R RC HR A L++G+++ ++
Sbjct: 19 WFVVARSQDI--STPQSATLLDQNLVVFRDSTGAARVTDRRCIHRGANLADGKVVGDSIQ 76
Query: 188 CLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-- 244
C YHGWQF+G G C +IP LPA+ +IP A ++ Y V E G VW + PD
Sbjct: 77 CPYHGWQFDGSTGACSRIPSLPANGRIPPKAAIKAYPVIERFGHVWTCLGDPVFDLPDPP 136
Query: 245 -----KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
+L W A P D + EN D AH P H+
Sbjct: 137 EIADLELEW--RAAEPIHADCGFM--------AATENFRDMAHFPFVHE 175
>gi|238751666|ref|ZP_04613155.1| Rieske (2Fe-2S) domain protein [Yersinia rohdei ATCC 43380]
gi|238710076|gb|EEQ02305.1| Rieske (2Fe-2S) domain protein [Yersinia rohdei ATCC 43380]
Length = 347
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V ++ P+G+T +QQIV+++D G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLEQQIVVWRDSTGTIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G+G + +PA + P C+R+Y KE GVV+++ P +
Sbjct: 83 CWYHGVEVGGDG---TVKDVPAVDRCPLVGQKCLRSYSAKEKYGVVFLYFGITADEEPTE 139
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
L + + A + + ++ LEN+MDP H H + A+ + +
Sbjct: 140 LTFPQELADEVNYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMAL 199
Query: 305 EVTERTDRGF 314
E TD GF
Sbjct: 200 ---ESTDSGF 206
>gi|440286235|ref|YP_007339000.1| ring-hydroxylating dioxygenase, large terminal subunit
[Enterobacteriaceae bacterium strain FGI 57]
gi|440045757|gb|AGB76815.1| ring-hydroxylating dioxygenase, large terminal subunit
[Enterobacteriaceae bacterium strain FGI 57]
Length = 340
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIV++++ G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W P++
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPEE 132
Query: 246 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LTFPEELADTESYSNFLCSAAWKCNYQYALENVMDPMHGTYLH 175
>gi|148556318|ref|YP_001263900.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501508|gb|ABQ69762.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 342
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++P + + ++ I+L +DG+GE+R ++RCPHR A LS G +E
Sbjct: 8 WYVAAWDDEIPAEGTFHRRILNEDILLARDGEGEVRALRNRCPHRFAPLSIGTRTGDAIE 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F +G+C+ P +IP +A V+TY V + W+WM +P +P
Sbjct: 68 CAYHGLRFGLDGRCLSNPH--GSGQIPANARVQTYPVVVRHLLAWIWMGDPDKADPSAIP 125
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
F P ++ + +N+MD HI H
Sbjct: 126 DLVGLDPERFAINRGYMHTPANYEYMADNIMDLGHIEFLH 165
>gi|429770138|ref|ZP_19302217.1| rieske [2Fe-2S] domain protein [Brevundimonas diminuta 470-4]
gi|429185400|gb|EKY26380.1| rieske [2Fe-2S] domain protein [Brevundimonas diminuta 470-4]
Length = 371
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 93/178 (52%), Gaps = 19/178 (10%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
T+ WY + L +DVP + + + +++ + GE+ +D CPHR A LS G+L++
Sbjct: 28 TDAWYFVALARDVPVASLKRYEIMGEPVLIGRTRAGEVYGMRDICPHRAAPLSAGRLVEK 87
Query: 185 -----RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMS-- 236
+EC YHGW+F +G C IP L D + VR+Y V+ESQG+V+VWM+
Sbjct: 88 PGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRSYPVRESQGMVFVWMAAD 147
Query: 237 QKTPPNPDKLPWFENFARPGFQDVSTIHELP-----YDHSILLENLMDPAHIPISHDR 289
+ P PD+ P F PG + E DH+++ LMDPAH P H +
Sbjct: 148 ARNPSEPDQEP--PQF--PGAVGQPRLVEWMDFDSHIDHAVV--GLMDPAHGPYVHQQ 199
>gi|40063004|gb|AAR37860.1| iron-sulfur cluster-binding protein, Rieske family [uncultured
marine bacterium 560]
Length = 346
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WYP+ + +V +PLG+ V +++VL++ G++ C +D+CPHR A LS G+L +G +
Sbjct: 21 QWYPVAKSVEVKSISPLGIEVLGEKLVLWRGDNGKVHCIKDQCPHRGAPLSFGRLHEGHI 80
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHG GEG V++P + + K VR +EV E ++++M ++
Sbjct: 81 SCRYHGIVVSGEGVVVRVPAM-QNCKFEGQKIVRAFEVTEIYDAIFIYMPSAENEKAPRM 139
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT---DYSAKRE----DA 299
+ + F + ++ L+NL DP H H + Y AK + D
Sbjct: 140 VFPKEFLSDSWSGFLCTAVWKTNYRYALDNLADPMHGSYLHAESFTLAYGAKEDLFKVDH 199
Query: 300 QPLGFEVTERTDRGFAGQWGREK--DGSMPNFLRFEAP 335
GF V+ G W + DG+M FL P
Sbjct: 200 TENGFIVSRTGQLGKNFDWAEFEMHDGTMFCFLDIPYP 237
>gi|170289317|ref|YP_001739555.1| Rieske (2Fe-2S) domain-containing protein [Thermotoga sp. RQ2]
gi|170176820|gb|ACB09872.1| Rieske (2Fe-2S) domain protein [Thermotoga sp. RQ2]
Length = 331
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 150/337 (44%), Gaps = 48/337 (14%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG-- 184
+WY + ++++ +G+T F +++ ++ G++ C D C HR A +S G+++
Sbjct: 5 QWYVVLSSRELKKGQLIGVTRFGEKLAFWRGSNGKVHCISDICCHRGASISHGKVLSNGE 64
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
R+ C +HG++++ +G+ IP + +P + V++Y E +W+W + P P
Sbjct: 65 RVICPFHGFEYDSQGRVRTIPANGRNTPVPENFRVKSYPTYELADFIWIWYGDREPEKPP 124
Query: 245 KLPWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKR---- 296
K +F++ F++V +H +S +EN +DP H+P H T R
Sbjct: 125 K--YFDDITDELVYTEFKEVWNVH-----YSRAIENQLDPIHLPFVHYNTIGRGNRTVVD 177
Query: 297 ------EDAQPLGFEVTERTDRGFAGQWGREKDGSMPN--FLRFEAPCVLQNNRESVDNK 348
+D + F V R D G + E D + +L F+ P + QN+
Sbjct: 178 GPIVEWKDDEMFYFYVFNRIDDGTPARKPEEMDPKRKSKVYLEFKFPNIWQNH------- 230
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRF--GTTGTSPWIKLFPDWYFHQSASKVFEQDMGF 406
EK T F P +M+ +RF G TG KL K F +
Sbjct: 231 ISEKIRVTAAFT--PIDDDHTMIYLRFYVGLTGIKFLDKLI------AVLGKPFNK---I 279
Query: 407 LSSQNEVLLKEKVPTK-ELYF--NLRSIDTWVAEYRK 440
+ Q++ +++ ++P + EL NL D + EYRK
Sbjct: 280 VLHQDKRVVETQIPKRSELRMGENLIPGDAPILEYRK 316
>gi|224015447|ref|XP_002297378.1| hypothetical protein THAPSDRAFT_bd783 [Thalassiosira pseudonana
CCMP1335]
gi|220967978|gb|EED86341.1| hypothetical protein THAPSDRAFT_bd783 [Thalassiosira pseudonana
CCMP1335]
Length = 187
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 27/190 (14%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK----DGKGELRCHQDRCPHRLAKLS 177
++++ WYP+ +DVP + P+ +T+FD VL K D CPH+ LS
Sbjct: 1 FNYSSHWYPVIWARDVPLNNPIRVTLFDVDYVLAKVKLPKNNEVFYAMHDSCPHKKVALS 60
Query: 178 EGQLID------GRLECLYHGWQFEGE-GKCVKIPQ-LPADA-KIPRSACVRTYEVKESQ 228
EG++ L+C YHGW F+G GKCV+IPQ + +DA K R + Q
Sbjct: 61 EGRITSCGSPNKQYLQCSYHGWSFDGRSGKCVEIPQTISSDATKKKRREDATVVATTQVQ 120
Query: 229 GVVWV-----------WMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 277
G+VW+ M + P ++P PG++ + + P D ++L+EN+
Sbjct: 121 GMVWIHPSLTPLEALSLMEEGKLSPPPRIP---EVDLPGYRTTVAVRDFPIDWTVLMENI 177
Query: 278 MDPAHIPISH 287
MDP H +H
Sbjct: 178 MDPDHGFFAH 187
>gi|113866094|ref|YP_724583.1| hypothetical protein H16_A0063 [Ralstonia eutropha H16]
gi|113524870|emb|CAJ91215.1| conserved hypothetical protein [Ralstonia eutropha H16]
Length = 346
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+W+P+ + D P +F + +VL+++ G DRCPHR A + G + DG L
Sbjct: 22 QWHPVLAIEQADGDGPFAARLFGRALVLWRNADG-WHAWDDRCPHRGAAFTLGAVHDGLL 80
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+F G+C + P P PR AC T+ V+E G++WV + +L
Sbjct: 81 HCGYHGWRFASGGRCTRYPAHPELVPAPR-ACATTHAVREGYGLLWVRLGGDGTEAVPEL 139
Query: 247 PWFENFARPGFQDVSTIHEL--PYDHSI----LLENLMDPAHIPISHD 288
P F P + D + PYD + L+EN +D AH HD
Sbjct: 140 PSF-----PEYHDAECRRVVCGPYDVATSAPRLVENFLDMAHFGYVHD 182
>gi|386288171|ref|ZP_10065332.1| vanillate monooxygenase [gamma proteobacterium BDW918]
gi|385278866|gb|EIF42817.1| vanillate monooxygenase [gamma proteobacterium BDW918]
Length = 351
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + D+ P G+ + +++IVL++D +G CPHR A LS+G+++ R++
Sbjct: 8 WYCAGWSADL-GGQPTGIKILNEEIVLFRDSEGRATALSGICPHRFAPLSKGKVVGDRIQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F EG+C+ P IP A +++Y + E G +W+WM + K+P
Sbjct: 67 CPYHGLEFNQEGRCMLNPH--GRGLIPERAKLQSYPLAERHGALWIWMGDPGAADESKIP 124
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
F+ + R + + + + ++++NL+D H H T
Sbjct: 125 EFDFVSDRESWAGATGYLRMDASYELVIDNLLDLTHADYIHGST 168
>gi|37962890|gb|AAR05799.1| lethal leaf-spot 1 [Zea mays]
Length = 197
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 13/150 (8%)
Query: 94 AVPT--PDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQ 151
A PT P + P++ GE+ + W + WYP+ L +D+ P + ++
Sbjct: 41 AAPTSVPGEAAEQAEPSTSAPESGEK----FSWRDHWYPVSLVEDLDPSRPTPFQLLNRD 96
Query: 152 IVLYKDGK-GELRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ-LP 208
+V++K+ K GE DRCPHRLA LSEG++ + G L+C YHGW F+G G C KIPQ +P
Sbjct: 97 LVIWKEPKSGEWVALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTKIPQAMP 156
Query: 209 A--DAKIPRS--ACVRTYEVKESQGVVWVW 234
+A+ RS AC + SQG+++VW
Sbjct: 157 EGPEARAVRSPKACAIKFPTLVSQGLLFVW 186
>gi|293394550|ref|ZP_06638846.1| Rieske family iron-sulfur cluster-binding protein [Serratia
odorifera DSM 4582]
gi|291423015|gb|EFE96248.1| Rieske family iron-sulfur cluster-binding protein [Serratia
odorifera DSM 4582]
Length = 357
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V ++ PLG+T +QQIVL++DG+G + +DRCPHR A+LS G + R+
Sbjct: 34 WYPVLASWEVGNN-PLGITRLEQQIVLWRDGEGAIHALEDRCPHRGARLSMGWNLGDRIA 92
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G+G +P + + C+R+Y KE+ G ++++ P +L
Sbjct: 93 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAIFLFFGVTADQPPSELA 151
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ + A + + ++ LEN+MDP H H + A + + E
Sbjct: 152 FPQELADDESYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMADGDRKADMALEP 211
Query: 307 TERTDRGF 314
TD GF
Sbjct: 212 ---TDSGF 216
>gi|329891293|ref|ZP_08269636.1| rieske 2Fe-2S domain protein [Brevundimonas diminuta ATCC 11568]
gi|328846594|gb|EGF96158.1| rieske 2Fe-2S domain protein [Brevundimonas diminuta ATCC 11568]
Length = 397
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 21/179 (11%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
T+ WY + L +DVP + + + +++ + GE+ +D CPHR A LS G+L++
Sbjct: 54 TDAWYFVALARDVPVASLKRYEIMGEPVLIGRTRAGEVYGMRDICPHRAAPLSAGRLVEK 113
Query: 185 -----RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMS-- 236
+EC YHGW+F +G C IP L D + VR Y V+ESQG+V+VWM+
Sbjct: 114 PGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRVYPVRESQGMVFVWMAAD 173
Query: 237 QKTPPNPDKLPWFENFARPGFQDVST----IHELPYDHSI--LLENLMDPAHIPISHDR 289
+ P PD+ P P F + + + +D I + LMDPAH P H +
Sbjct: 174 ARNPSEPDQEP-------PQFPGAVSQPRLVEWMDFDSHIDHAVVGLMDPAHGPYVHQQ 225
>gi|187926682|ref|YP_001893027.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia pickettii 12J]
gi|241666194|ref|YP_002984553.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia pickettii 12D]
gi|187728436|gb|ACD29600.1| Rieske (2Fe-2S) domain protein [Ralstonia pickettii 12J]
gi|240868221|gb|ACS65881.1| Rieske (2Fe-2S) domain protein [Ralstonia pickettii 12D]
Length = 355
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V +AP+G+T Q IVL++D G++ +DRCPHR A+LS G + +
Sbjct: 21 WYPVAASWNV-KNAPVGITRLSQNIVLWRDTAGQVHALEDRCPHRGARLSMGWNLGDHVA 79
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD--- 244
C YHG + G+G +P + A + CVR+Y V+E G +++W K P D
Sbjct: 80 CWYHGVEVNGQGTVTSVPAVDA-CPMEGKTCVRSYPVQERAGAIFLWFGDKAPSEFDDAV 138
Query: 245 ---KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
+LP E ++ ++N+MDP H H + A E
Sbjct: 139 GTLRLP--EELTSDEHSHFLCFAHWNVNYRYAIDNVMDPMHGAYLHAVSHSMASGEKKAV 196
Query: 302 LGFEVTERTDRGFAGQ 317
+ EV E TD G Q
Sbjct: 197 M--EVVE-TDHGIMFQ 209
>gi|309779717|ref|ZP_07674475.1| iron-sulfur cluster-binding protein, Rieske family [Ralstonia sp.
5_7_47FAA]
gi|349616646|ref|ZP_08895783.1| hypothetical protein HMPREF0989_04029 [Ralstonia sp. 5_2_56FAA]
gi|308921516|gb|EFP67155.1| iron-sulfur cluster-binding protein, Rieske family [Ralstonia sp.
5_7_47FAA]
gi|348612291|gb|EGY61913.1| hypothetical protein HMPREF0989_04029 [Ralstonia sp. 5_2_56FAA]
Length = 355
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V +AP+G+T Q IVL++D G++ +DRCPHR A+LS G + +
Sbjct: 21 WYPVAASWNV-KNAPVGITRLSQNIVLWRDTAGQVHALEDRCPHRGARLSMGWNLGDHVA 79
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD--- 244
C YHG + G+G +P + A + CVR+Y V+E G +++W K P D
Sbjct: 80 CWYHGVEVNGQGTVTSVPAVDA-CPMEGKTCVRSYPVQERAGAIFLWFGDKAPSEFDDAV 138
Query: 245 ---KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
+LP E ++ ++N+MDP H H + A E
Sbjct: 139 GTLRLP--EELTSDEHSHFLCFAHWNVNYRYAIDNVMDPMHGAYLHAVSHSMASGEKKAV 196
Query: 302 LGFEVTERTDRGFAGQ 317
+ EV E TD G Q
Sbjct: 197 M--EVVE-TDHGIMFQ 209
>gi|294083911|ref|YP_003550668.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663483|gb|ADE38584.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 347
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 19/185 (10%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
LT+ + +V+++ KG +D CPHR LS G+L D R+EC YHG F+ G CV
Sbjct: 29 LTILGEHVVIFRTAKGVAVALEDACPHRKLPLSHGRLQDDRVECGYHGLTFDCSGHCV-- 86
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARP-------GF 257
P P V++Y V++ G++W+WM N D++ EN+ P G
Sbjct: 87 -HAPTQQNSPPDVSVKSYPVEDRYGLLWIWMGAPEAANTDEIFRIENYDNPAWGKTRGGS 145
Query: 258 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
DV+ H L + +NL+DP+H+ H + A ED PL E E D +
Sbjct: 146 MDVAC-HYL-----YVTDNLLDPSHVAWVHVSSFAGAGTEDV-PLNVERLE--DGVLVSR 196
Query: 318 WGREK 322
W +++
Sbjct: 197 WMQDR 201
>gi|399076261|ref|ZP_10751914.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. AP07]
gi|398037594|gb|EJL30779.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. AP07]
Length = 353
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 13/168 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ +D+ + APL + + D +VLY+ G + D CPHR +LS G + DG +
Sbjct: 31 WHPVAKAEDLAE-APLAVKLLDVDLVLYRAQDG-VTAALDMCPHRWIRLSAGTVTDGNIV 88
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C +HG F+G G+CV +P L AK+P S V T+ G++WV + + + LP
Sbjct: 89 CPFHGLAFDGTGQCVHVPALGRTAKLPASYRVATFRTAIKYGMIWVCLDDDS---QEPLP 145
Query: 248 WFE-----NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
FE + + GF +V P + +EN D AH+P+ H T
Sbjct: 146 TFEALEGYDISALGFGNVCL---WPMSAARQIENFFDLAHLPLIHATT 190
>gi|297852214|ref|XP_002893988.1| hypothetical protein ARALYDRAFT_473812 [Arabidopsis lyrata subsp.
lyrata]
gi|297339830|gb|EFH70247.1| hypothetical protein ARALYDRAFT_473812 [Arabidopsis lyrata subsp.
lyrata]
Length = 536
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 153/339 (45%), Gaps = 40/339 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ T D+ D + + F+Q V+++ G+ C ++ C HR L G + +GR++
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +G+C K+P KI C+ E +G++W+W + PP P L
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCL------EQEGMIWIWPGDE-PPAP-TL 332
Query: 247 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + + GF + +LP +H +LL+NL+D AH P +H T AK L
Sbjct: 333 PCLQPPS--GFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKF 388
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYSTG 357
+T + G G W P + F+ PC++ + E K H
Sbjct: 389 LTPSS--GLQGYW-----DPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTKQCATHLHQ- 440
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVLL 415
L +C P+ + K+ L+ R + +P +K P + + A +V +D+ + Q E +L
Sbjct: 441 LHVCLPSSKNKTRLLYRM-SLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERML 499
Query: 416 KEKVPTKELYFNLRSIDTWVAEYRKW---MDKAGHGMPY 451
++ + D YR W +D+ +P+
Sbjct: 500 N----GANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|386012094|ref|YP_005930371.1| Rieske 2Fe-2S family protein [Pseudomonas putida BIRD-1]
gi|313498800|gb|ADR60166.1| Rieske 2Fe-2S family protein [Pseudomonas putida BIRD-1]
Length = 341
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGRL 186
WY L L +D P T+ + +VL+K G QDRC HR AKLS+G + +G +
Sbjct: 13 WYAL-LPMTALEDGPRPFTLLGEALVLWKRPDGTPVAMQDRCCHRTAKLSKGFVSAEGNI 71
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+++ G CVKIPQ P A IP A V+ Y +E G WV + P +
Sbjct: 72 ACGYHGWEYDCTGTCVKIPQNPTGA-IPPGAAVKAYHCQEKYGYAWVSLDDPLQP----I 126
Query: 247 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P F PG++ + +E + ++EN D +H H + ++ + QP +E
Sbjct: 127 PEFPEDGTPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVH-KANFGLF-DQPQPASYE 184
Query: 306 VTERTDRGFAGQ 317
E TD GF +
Sbjct: 185 FRE-TDYGFEAE 195
>gi|270262999|ref|ZP_06191269.1| hypothetical protein SOD_d00140 [Serratia odorifera 4Rx13]
gi|421785376|ref|ZP_16221802.1| rieske family iron-sulfur cluster-binding protein [Serratia
plymuthica A30]
gi|270042687|gb|EFA15781.1| hypothetical protein SOD_d00140 [Serratia odorifera 4Rx13]
gi|407752393|gb|EKF62550.1| rieske family iron-sulfur cluster-binding protein [Serratia
plymuthica A30]
Length = 347
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V ++ P+G+T +QQIV+++DG+G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLEQQIVVWRDGEGAIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G+G +P + + C+R+Y KE+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGITADEAPPELT 141
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ + A + + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPQELADEAAYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 307 TERTDRGF 314
TD GF
Sbjct: 202 ---TDTGF 206
>gi|443317166|ref|ZP_21046585.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783241|gb|ELR93162.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 351
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++D+ T+ ++ I+L + +G+ +D CPHR LS G+ +E
Sbjct: 14 WYHALPSRDLKPGQMRSKTLLNEPILLGRTQRGQAFALRDICPHRAVPLSCGRFDGESVE 73
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+F G C++IP L AD + S VR Y+V+E QG VW++M+ PNP ++
Sbjct: 74 CCYHGWRFGPNGSCLQIPSLMADQTLDLSKFDVRRYDVQEVQGNVWIYMAD---PNPQQV 130
Query: 247 --PWFENFARPGFQDVS---TIHELPY----DHSILLENLMDPAHIPISH-------DRT 290
P FE PGF + + + +P+ DH+++ LMDPAH P H
Sbjct: 131 HPPRFEVPRIPGFPEDAQPQISYTMPFSCFVDHAVV--GLMDPAHSPFVHRAWWWRGGNL 188
Query: 291 DYSAKREDAQPLGFEV----TERTDRGF 314
+ K D P GF + E RG+
Sbjct: 189 NPEIKWFDPSPYGFTMRKHRMENMGRGY 216
>gi|73537405|ref|YP_297772.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|72120742|gb|AAZ62928.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
Length = 355
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 7/183 (3%)
Query: 109 SEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDR 168
S +++R E R+ + WYP+ + V AP+G+T Q IVL++D G++ +DR
Sbjct: 3 SNKQARAEARL-NSGLRNYWYPVAASWAVTH-APIGITRLSQNIVLWRDNAGQVHALEDR 60
Query: 169 CPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQ 228
CPHR A+LS G + R+ C YHG + G+G+ +P + + + CVR+Y V+E
Sbjct: 61 CPHRGARLSMGWNLGDRVACWYHGVEVGGDGQVKSVPAVDS-CPLEGRTCVRSYPVQEQA 119
Query: 229 GVVWVWMSQKTPP----NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 284
G +++W + P +PD L E + ++ ++N+MDP H
Sbjct: 120 GAIFLWFGDQAPQEGEGSPDALRLPEELVSEEHSHFLCVAHWDCNYRYAIDNVMDPMHGA 179
Query: 285 ISH 287
H
Sbjct: 180 YLH 182
>gi|434395181|ref|YP_007130128.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
gi|428267022|gb|AFZ32968.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
Length = 369
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + + ++ Q I +Y+D G+L +D CPH+ L +G++ L
Sbjct: 26 WYAVSWANQLKPGDIIPVVIWQQAIAVYRDINGQLHALEDFCPHKGVALHKGKVHGCNLA 85
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+ EG CVKIP LP K+PR A VR+Y ++E ++W++ + +LP
Sbjct: 86 CAYHGWEFDSEGSCVKIPYLPEKQKLPR-ASVRSYPIQEKYNLIWIFPGEPHLAATCQLP 144
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
F + V SI EN MD H
Sbjct: 145 HIPEFFETEWLVVPISAHFQAHFSICNENTMDVFH 179
>gi|125588313|gb|EAZ28977.1| hypothetical protein OsJ_13021 [Oryza sativa Japonica Group]
Length = 435
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 152/436 (34%), Gaps = 105/436 (24%)
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
RL L H WQ K ACV +Y ++W + + P +
Sbjct: 42 RLIELSHQWQVHKNSK----------------ACVASYPCVVQNNILWFY-PRSEPEYKE 84
Query: 245 KL-----PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRED- 298
L P+ P F V + +LPY + +L+ENLMDPAH+P +H + K+ED
Sbjct: 85 ILQRKRPPYIPQIDDPSFVTVYGVRDLPYGYDVLVENLMDPAHVPYAHKGLMRTRKKEDP 144
Query: 299 -----------------AQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNN 341
PL E+ E GF R F +F APC +
Sbjct: 145 GRYNIHLLYTVEFDKEGGGPLKMEIEETNVEGFLSMLDR-------GFFKFVAPCTFYGS 197
Query: 342 -----------------RESVDNKTGEKHYS----TGLFLCRPTGQGKSMLIVRFGTTGT 380
+ S+D++ EK +FLC P G+S L+ F
Sbjct: 198 PLQTPSQALFKLIEPSYKISIDDQGKEKKKKQPTVMLVFLCIPVSPGRSRLVWAF-PRNV 256
Query: 381 SPWI-KLFPDWYFHQSASKVFEQDMGFL--SSQNEVLLKEKVPTKELYFNLRSIDTWVAE 437
W+ K+ P WY+H + + + D+ L +N + K Y S D +
Sbjct: 257 GVWMDKIIPRWYYHIGQNAILDSDIYLLHIEERNFATVGLDNWQKACYVPTSS-DNMIIT 315
Query: 438 YRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLA 497
+R W K Y H G ++ LP T L
Sbjct: 316 FRNWFRK-------YCKHQI---------------GWATPITNQLPP-----TPSKDQLL 348
Query: 498 NRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGR-----QWRAFCLVSAS 552
+RY+ HV+ C C A+K + +L A+ + + G R+ + +A
Sbjct: 349 DRYWSHVMQCTSCSGALKKMKALEVALQVASVAVVGFLAVAKGTVVTSVVQRSAVVAAAV 408
Query: 553 LCLAGVYACSTAISMN 568
LC A + I N
Sbjct: 409 LCFAASRWLANFIEKN 424
>gi|420251385|ref|ZP_14754562.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398057977|gb|EJL49901.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 349
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++DV D + + ++LY+ G DRCPHR A LS G+ + +E
Sbjct: 8 WYAAAWSRDVGADLST-RELLGEPMLLYRKHDGAPVAMIDRCPHRFAPLSMGKRVGDGIE 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG QF+ G C K P D +IP A VR++ ++ G+VW+W + + N +P
Sbjct: 67 CGYHGLQFDCSGACSKNPH--GDGRIPPGARVRSFPAEDRHGLVWIWAGEPSRANASLIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
F + P + V + ++++NLMD +H+ H
Sbjct: 125 DFSHLVSPRLKTVGDEMTQKAHYELVVDNLMDLSHVNYLH 164
>gi|333929001|ref|YP_004502580.1| Rieske (2Fe-2S) domain-containing protein [Serratia sp. AS12]
gi|333933954|ref|YP_004507532.1| Rieske (2Fe-2S) domain-containing protein [Serratia plymuthica AS9]
gi|386330824|ref|YP_006026994.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Serratia sp.
AS13]
gi|333475561|gb|AEF47271.1| Rieske (2Fe-2S) iron-sulfur domain protein [Serratia plymuthica
AS9]
gi|333493061|gb|AEF52223.1| Rieske (2Fe-2S) iron-sulfur domain protein [Serratia sp. AS12]
gi|333963157|gb|AEG29930.1| Rieske (2Fe-2S) iron-sulfur domain protein [Serratia sp. AS13]
Length = 347
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V ++ P+G+T +QQIV+++DG+G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLEQQIVVWRDGEGAIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G+G +P + + C+R+Y KE+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGITADEAPPELT 141
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ + A + + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPQELADEAAYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 307 TERTDRGF 314
TD GF
Sbjct: 202 ---TDTGF 206
>gi|406039915|ref|ZP_11047270.1| vanillate O-demethylase oxygenase [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +D+ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEDI-QDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG EGK + +P ++ C ++Y V E G +WVW +KT N LP
Sbjct: 66 CGYHGLVMGCEGKTISMPA----QRVTGFPCNKSYAVVEKMGFIWVWPGEKTLANEADLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 VLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|410647609|ref|ZP_11358032.1| vanillate monooxygenase [Glaciecola agarilytica NO2]
gi|410132827|dbj|GAC06431.1| vanillate monooxygenase [Glaciecola agarilytica NO2]
Length = 349
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 5/160 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D + PLG + ++IV Y+ +G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEFTNKPLGRQICGERIVFYRGTEGKVSAVEDFCPHRGAPLSLGYVEDGLLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G ++P ++ C+R+Y V E G VWVW + T +P K+P
Sbjct: 66 CGYHGLKMGCDGSTAEMP----GQRVNGFPCIRSYPVVERHGFVWVWTGESTLADPSKIP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
E P + ++ + D+ ++++NLMD H H
Sbjct: 122 ELEWANNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVH 161
>gi|170722290|ref|YP_001749978.1| vanillate monooxygenase [Pseudomonas putida W619]
gi|169760293|gb|ACA73609.1| Vanillate monooxygenase [Pseudomonas putida W619]
Length = 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 9/167 (5%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY L ++ D P+G T+ ++ +V+++ G++ ++RC HR LS+G L G L
Sbjct: 25 QWYVAALGWEL-KDRPVGRTLLNKSVVMFRTADGKVAALENRCCHRALPLSDGTLEAGGL 83
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHG F EGKC++I P KIP A V + V E +VW+W + P P
Sbjct: 84 RCGYHGLLFNDEGKCIEI---PGQDKIPSKAKVAAFHVVEKDQIVWIWFASPEHPEPTTE 140
Query: 247 PWFENFARPG---FQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P + G F ++ PY ++ +NLMD +H+ H RT
Sbjct: 141 PPSYDIHSSGDYLFDGDVYHYDAPY--QLIHDNLMDLSHLGYVHLRT 185
>gi|220908309|ref|YP_002483620.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864920|gb|ACL45259.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 337
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYPL ++ + P T+ + +VL+ D +G DRC HR AKLS G++++G +
Sbjct: 13 WYPLIPLVEL-EQGPQAFTLLGEPLVLWLDAQGNPAATLDRCCHRQAKLSTGKVMEGCIR 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+ +G CV++PQ P D IP + + + + G WV + + D +P
Sbjct: 72 CPYHGWEFDAQGACVRVPQHP-DRPIPSNYRITAFACRAHYGYAWVCLEEPL----DTIP 126
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
F P F+ + +E + L+EN D H H++ + + P+ +
Sbjct: 127 AFPEADDPHFRLIPAFYETWNCSGLRLMENAFDHGHHHFVHNQN--LGDKHNPIPIPYNQ 184
Query: 307 TERTDRGFAGQ 317
T+RG Q
Sbjct: 185 LRETERGIYFQ 195
>gi|365899304|ref|ZP_09437217.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3843]
gi|365419928|emb|CCE09759.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3843]
Length = 347
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V A L T+ + +V+Y+ G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KQALLPRTICGKHVVMYRKADGTVTALEDACWHRLVPLSKGRLEGDTVV 68
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F +G+C +P+ I SACVR Y E +W+WM +P +P
Sbjct: 69 CGYHGLKFNAQGRCTF---MPSQETINPSACVRAYPAIERHRFIWLWMGDPALADPADIP 125
Query: 248 ---WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
W + A G D TIH + D+ ++++NLMD H H S E F
Sbjct: 126 DMHWNHDPAWAG--DGKTIH-VKCDYRLVVDNLMDLTHETFVHGS---SIGNEAVAEAPF 179
Query: 305 EVT--ERTD------RG------FAGQWGREKDGSMPNFLRFEAPCVL 338
+VT ERT RG +A Q G+E +RFEAPC +
Sbjct: 180 DVTHGERTATVTRWMRGIEPPPFWAKQLGKEGLVDRWQIIRFEAPCTV 227
>gi|307727020|ref|YP_003910233.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307587545|gb|ADN60942.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 367
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V DAP+G+T QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPVGITRLGDQIVLWRDKEGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G K+P + A + CV++Y +E G +++W P L
Sbjct: 85 CWYHGIEVNGSGTVTKVPAVSA-CPLEGQKCVKSYPAQEHAGAIFLWFGDDAHKEPAPLQ 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ + + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPQELVGEEYASFLCMSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|448243829|ref|YP_007407882.1| Rieske (2Fe-2S) domain-containing protein [Serratia marcescens WW4]
gi|445214193|gb|AGE19863.1| Rieske (2Fe-2S) domain-containing protein [Serratia marcescens WW4]
Length = 347
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V ++ P+G+T QQIV+++DG+G++ +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLGQQIVVWRDGEGQIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G+G +P + + C+R+Y KE+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGVTADETPAELT 141
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ + A + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPQELADEASYSHFLCTASWNCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 307 TERTDRGF 314
TD GF
Sbjct: 202 ---TDSGF 206
>gi|5478807|dbj|BAA82484.1| chlorophyll b synthase [Arabidopsis thaliana]
Length = 536
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 151/340 (44%), Gaps = 42/340 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ T D+ D + + F+Q V+++ G+ C ++ C HR L G + +GR++
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +G+C K+P KI C+ E +G++W+W + P
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCL------EQEGMIWIWPGDEPPA----- 329
Query: 247 PWFENFARP-GFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
P + P GF + +LP +H +LL+NL+D AH P +H T AK L
Sbjct: 330 PILPSLQPPSGFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVK 387
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYST 356
+T + G G W P + F+ PC++ + E + H+
Sbjct: 388 FLTPTS--GLQGYW-----DPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHFHQ 440
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVL 414
L +C P+ + K+ L+ R + +P +K P + + A +V +D+ + Q E +
Sbjct: 441 -LHVCLPSSKNKTRLLCRM-SLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERM 498
Query: 415 LKEKVPTKELYFNLRSIDTWVAEYRKW---MDKAGHGMPY 451
L ++ + D YR W +D+ +P+
Sbjct: 499 LN----GANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|115359078|ref|YP_776216.1| vanillate monooxygenase [Burkholderia ambifaria AMMD]
gi|115284366|gb|ABI89882.1| Vanillate monooxygenase [Burkholderia ambifaria AMMD]
Length = 366
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V D T+ ++ ++L+++ +GE++ +RCPHR A L G+ + ++
Sbjct: 16 WYVAAWDSEVKADELFQRTLLNESVLLFRNDRGEVQAVSNRCPHRFAPLHLGKKLPNGVQ 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G G+C + P +P++A ++TY V E ++W+WM + + + K+P
Sbjct: 76 CPYHGLEFDGSGQCTRNPH--GGGVVPKAAQLKTYPVVEKYSLIWIWMGEASIADSSKIP 133
Query: 248 WFENFARPGFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
F P V+ + + ++ + +N++D +HI H T S+ DA +
Sbjct: 134 DFSCL-DPQLSHVAKRYLHVKANYVLETDNILDLSHIQYLHPGTLGSSSVADA------I 186
Query: 307 TERTDRGFAGQWGREKDGS-MPNFL 330
T G R+ G MP FL
Sbjct: 187 TSVVQEGNTVYSMRQTVGDIMPEFL 211
>gi|254254788|ref|ZP_04948105.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
gi|124899433|gb|EAY71276.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
Length = 347
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + +++V ++D G + +D CPHR A LS G + DGRL
Sbjct: 7 WY-VACTPDEFADKPLGRQICGERMVFFRDANGTVAALEDFCPHRGAPLSLGTVRDGRLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW---MSQKTPPNPD 244
C YHG +GKCV +P ++ +R Y E G VWVW +Q P
Sbjct: 66 CGYHGLTMGADGKCVSMPC----QRVGGIPAIRRYPAVERYGFVWVWPGDPAQADPATIH 121
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
+L W ++ PG+ ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 RLHWADD---PGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQPEIEEAPP 175
>gi|312602310|ref|YP_004022155.1| vanillate demethylase oxygenase subunit [Burkholderia rhizoxinica
HKI 454]
gi|312169624|emb|CBW76636.1| Vanillate demethylase oxygenase subunit (EC 1.14.13.82)
[Burkholderia rhizoxinica HKI 454]
Length = 363
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+ + + DV D PL + + + +VL++D G + D C HR A+LS G + DG
Sbjct: 24 DQWHVVARSDDVARDMPLAVRLLGEDLVLWRDHAG-INAWLDYCGHRGARLSLGCVRDGE 82
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+EC YHGW++ G+C K+P P D P VR Y V E G+VWV + Q P D
Sbjct: 83 IECPYHGWRYASSGQCTKVPAHP-DQTPPAQRLVRVYRVTERYGLVWVCVGQ---PASDV 138
Query: 246 LPWFENFARPGFQDVS--TIHELPYDHSI----LLENLMDPAHIPISH 287
P+ P + D S ++ PY + +EN +D +H P H
Sbjct: 139 PPF------PEWDDASFRKVYAGPYRYRANALRSVENFLDASHFPFVH 180
>gi|188580361|ref|YP_001923806.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium populi
BJ001]
gi|179343859|gb|ACB79271.1| Rieske (2Fe-2S) domain protein [Methylobacterium populi BJ001]
Length = 357
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 124 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
W WY D+ D P T+ ++IVL+ DG+G DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDLAD-GPKPFTLMGERIVLFLDGEGVPAAMMDRCCHRTARLSKGWCED 67
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
G + C YHGW ++ G +IPQ + +PR A V++Y G WV + +
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLEEPYA--- 123
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPL 302
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -AIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 303 GFEVTERTDRGFAGQ 317
+E+TE T+ GF +
Sbjct: 181 KYEITE-TEYGFEAE 194
>gi|405377801|ref|ZP_11031737.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF142]
gi|397325707|gb|EJJ30036.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF142]
Length = 442
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 128 WYPLYLTKDVPDDA-PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
W P+ ++ ++ D P+ L + +++V ++D +G + RCPHR A L G+ G +
Sbjct: 27 WIPVCMSSELKADGDPVRLMILGEKLVAFRDSEGRVGVFDHRCPHRCASLFFGRNEMGGI 86
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+F+ GKC+ P L +K P Y VKES G+V+ +M ++ NP +L
Sbjct: 87 RCAYHGWKFDVTGKCLDQPNLEDKSKYPAGTPAIAYRVKESGGLVFAYMGEEQ-ANPPEL 145
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P E G + ++ LE +D +H+ H K + + P F V
Sbjct: 146 PELEAIMAEGDDRNIALTHRDCNYMQALEGDIDTSHLGFLHVGGIDGEKLDLSDPEVFTV 205
Query: 307 TERT 310
TE+
Sbjct: 206 TEKA 209
>gi|148554478|ref|YP_001262060.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499668|gb|ABQ67922.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 347
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 8/167 (4%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
+WY ++D+ D AP+ + + IVL++ G + D CPHR L G+++DG
Sbjct: 5 VNQWYGAIWSQDLGD-APVARRLLGKPIVLFRTDDG-VAALADVCPHRFVPLHLGKVVDG 62
Query: 185 R-LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
R + C YHG +F+ G CV+ P +IP +A V +++V E G+VW+WM ++ +P
Sbjct: 63 RAIRCGYHGLEFDRTGACVRNPHNAG--RIPPAAKVESHQVAERHGMVWIWMGERD-ADP 119
Query: 244 DKLP--WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
+P F + A P E+ ++ I++ENL+D +H I HD
Sbjct: 120 SLIPDYSFLDSADPQHISARDHLEIRSNYRIVVENLLDLSHASILHD 166
>gi|87199507|ref|YP_496764.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135188|gb|ABD25930.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 351
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 146 TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 205
T + +V Y+ G G L DRC HRLA LS G+L + C+YHG +F +GKCV+I
Sbjct: 31 TFLAEPVVFYRKGDGTLVAMADRCVHRLAPLSLGRLEGDDIRCMYHGMRFTADGKCVEI- 89
Query: 206 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE 265
P IP SAC++TY V E W+WM + LP P + S +
Sbjct: 90 --PGQDMIPSSACIQTYPVVEKGSWAWIWMGDPHLADAALLPDARGLDDPVWVLKSGQLD 147
Query: 266 LPYDHSILLENLMDPAHIPISH 287
H ++ +NL+D +H+ H
Sbjct: 148 YAAPHELINDNLLDLSHLAYVH 169
>gi|442318048|ref|YP_007358069.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
gi|441485690|gb|AGC42385.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
Length = 363
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 132/322 (40%), Gaps = 63/322 (19%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ L ++++ D PL T+ +VL++ G+ DRCPHR LS G+++ G+L+
Sbjct: 26 WFILCTSREL-GDKPLSRTLQGTPLVLFRGEGGKPGALMDRCPHRNVPLSLGRVMQGQLQ 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP--NPDK 245
C YHGW+F+ G+C IP + + RS CV +Y +E G +WV+ + P P +
Sbjct: 85 CGYHGWRFDTGGQCRAIPGFLGEPE-ARSRCVTSYATREQDGFIWVYSTPGVEPATEPYR 143
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD---RTD----------- 291
P + AR + V I P LEN +D H H RT+
Sbjct: 144 FPLLD--ARE-YTTVRRILRAPGSLHATLENTLDVPHTAYLHGGLFRTEEKRNEIEVVVR 200
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGE 351
SA R +A+ +G E G G+ G + +F RF P + Q V+ + G+
Sbjct: 201 RSADRVEAEYIG----EPRPSGVVGRLLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGD 251
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKL----------FPDWYFHQ------- 394
S ++V T S W L P W
Sbjct: 252 ----------------ASHIMVTSAMTPVSDWDTLVYAVVTFRLPLPRWLLRAVLPIAMP 295
Query: 395 SASKVFEQDMGFLSSQNEVLLK 416
A +F QD L +Q E + +
Sbjct: 296 VALHIFGQDARILKTQTEAIRR 317
>gi|157372201|ref|YP_001480190.1| Rieske (2Fe-2S) domain-containing protein [Serratia proteamaculans
568]
gi|157323965|gb|ABV43062.1| Rieske (2Fe-2S) domain protein [Serratia proteamaculans 568]
Length = 347
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + ++ ++ P+G+T +QQIV+++DG+G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEIGNN-PVGITRLEQQIVVWRDGEGAIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G+G +P + + C+R+Y KE+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGVTADEEPAELT 141
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ A + + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPPELADEAAYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 307 TERTDRGF 314
TD GF
Sbjct: 202 ---TDSGF 206
>gi|453330723|dbj|GAC87469.1| vanillate O-demethylase oxygenase [Gluconobacter thailandicus NBRC
3255]
Length = 351
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 123 DW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
DW + WYP+ L++D+ D+P+G+T+ D +V+Y+ G++ D CPHR LS G
Sbjct: 25 DWQILAKSWYPVALSRDL-GDSPMGVTLLDAPLVVYR-ADGDIVIADDLCPHRGVPLSMG 82
Query: 180 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
+ C YHG++F +G+CV++P P D+KIP +RTY V E G++W + +
Sbjct: 83 NGNGKTIACAYHGFRFGQDGRCVRVPAHP-DSKIPPKLHLRTYPVIERFGLIWTCLRPEG 141
Query: 240 PPNPDKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDYSAKRED 298
N +P +++ P FQ ++ ++ +E +D AH H T+ A E+
Sbjct: 142 DVNLPPMPHWDD---PAFQQITCPWIDIKGFAGRQVEGFIDVAHFAFVH--TETFADPEN 196
Query: 299 AQPLGFEVTERTDRGFAGQW 318
L + + T+ GF ++
Sbjct: 197 PIVLAYS-PKLTETGFEAEY 215
>gi|92112477|ref|YP_572405.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91795567|gb|ABE57706.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 353
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D ++ PLG T+ ++QIV ++ G++ +D CPHR A LS G + DG+L
Sbjct: 7 WY-VACTPDEIEEKPLGRTICNEQIVFFRAEGGQVAAVEDFCPHRGAPLSLGFVRDGQLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GKC +P ++ + Y V E G +WVW +PD++P
Sbjct: 66 CGYHGLEMGCDGKCSSMP----GQRVRGFPSIHAYPVVERHGFIWVWPGDAEQADPDQIP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
P + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 ELHWANDPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQPEIEEAAP 175
>gi|456386742|gb|EMF52278.1| oxidoreductase subunit alpha [Streptomyces bottropensis ATCC 25435]
Length = 351
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+WY ++V + LG TV + +V Y+ + +G DRC HR LSE L R
Sbjct: 8 QWYVAAYAEEVGREL-LGRTVLGEPLVFYRTEEEGTPVALHDRCVHRRYPLSESGLDGDR 66
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG+ ++ G CV +P +IPR+A V +Y V E ++WVW+ +P
Sbjct: 67 IVCGYHGFTYDTTGACVYVP---GQKRIPRTARVASYPVVEQDSLIWVWIGDPALADPQT 123
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
+P + A PG+ V + + D+ +L++NL+D +H
Sbjct: 124 IPRARHLAAPGWTTVRGMEPIDADYGLLVDNLLDLSH 160
>gi|427739261|ref|YP_007058805.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374302|gb|AFY58258.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 374
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 8/205 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP ++ L + +++ I LY+ G++ +D CPH+ L +G++ L
Sbjct: 26 WYPATWASELKPSQVLPVVIWNSAIALYRSQDGQVHAIEDACPHKGVALHKGKVTGENLA 85
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F G G C IP P D K+P A R+Y V+E +VW++ +LP
Sbjct: 86 CPYHGWEFNGNGICTNIPYFPKDQKLP-CAKARSYAVREKYNIVWIFPGAVEDSEKVELP 144
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
+ P + + E SI EN MD H + + + D Q L + +
Sbjct: 145 SVPEYDDPNWLAIPIPGEFKAHFSICNENTMDVFHGYLHENLQGWF----DPQLLSLKAS 200
Query: 308 ERTDRGFAGQWGREKDGSMPNFLRF 332
E + Q+ G M F F
Sbjct: 201 EES---VFAQYRVSYQGWMTKFFGF 222
>gi|434388981|ref|YP_007099592.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019971|gb|AFY96065.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 321
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + +P L + D+++VLY+ G +R + C HR A L+ G + + +
Sbjct: 6 WYAVEFCNAI-GTSPKLLKILDRELVLYRTADGRIRAIDNNCIHRGAALANGWIENDCIV 64
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQ++ +G C KIP A A IP+ A + Y V E G +W+++ + +P
Sbjct: 65 CPYHGWQYQTDGTCSKIPSQAATATIPKPAKMAVYPVGEKYGWIWLFLGDEMAGEIPTIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
F + + ++ +LEN +D AH P H + R + Q L E
Sbjct: 125 NFPQLESDAIRSIQGEFYWNANYERVLENGLDFAHAPFVHSGAFGNPDRPEIQDLQIE 182
>gi|421521214|ref|ZP_15967873.1| Rieske 2Fe-2S family protein [Pseudomonas putida LS46]
gi|402755154|gb|EJX15629.1| Rieske 2Fe-2S family protein [Pseudomonas putida LS46]
Length = 341
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGRL 186
WY L L +D P T+ + +VL+K G QDRC HR AKLS+G + +G +
Sbjct: 13 WYAL-LPMTALEDGPKPFTLLGEALVLWKRPDGTPVAMQDRCCHRTAKLSKGFVSAEGTI 71
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+++ G CVKIPQ P A IP A V+ Y +E G WV + P +
Sbjct: 72 ACGYHGWEYDCTGTCVKIPQNPTGA-IPPGAAVKAYHCQEKYGYAWVSLDAPLQP----I 126
Query: 247 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P F PG++ + +E + ++EN D +H H + ++ + QP +E
Sbjct: 127 PEFPEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVH-KANFGLF-DQPQPASYE 184
Query: 306 VTERTDRGFAGQ 317
E TD GF +
Sbjct: 185 FRE-TDYGFEAE 195
>gi|254415185|ref|ZP_05028947.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196177991|gb|EDX72993.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 353
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + L + ++ Q I +Y+ G+L ++ CPH+ +L +G + D L
Sbjct: 26 WYSVAWANQIKPGQILPVKIWQQSIAVYRTPTGQLHALENACPHKGVELHKGIVQDEYLA 85
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF+G GKCV IP P + K+P A VRTY ++E ++W++ +LP
Sbjct: 86 CPYHGWQFDGAGKCVGIPYFPPEQKLP-CAQVRTYPIQEKYKLIWIFPGDPALATTCQLP 144
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
F P + V + SI EN MD H
Sbjct: 145 DMPEFDHPDWFMVPVSARMKSHFSICNENTMDVFH 179
>gi|388547602|ref|ZP_10150865.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M47T1]
gi|388274362|gb|EIK93961.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M47T1]
Length = 348
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D PLG + + +V Y++G G++ +D CPHR A LS G+++DG+L
Sbjct: 7 WY-VACTPDELAPGPLGRQICGESMVFYRNGSGQVAALEDFCPHRGAPLSLGRVVDGQLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK +P ++ RT+ E G +WVW ++ P ++P
Sbjct: 66 CGYHGLVMGCDGKVQSMP----GQRVASFPLTRTFACVERHGFIWVWPGEQALAEPGQIP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
E P + ++E+ D+ ++++NLMD H H + + ++A P
Sbjct: 122 HLEWANNPQWAYGGGLYEIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEALP 175
>gi|170743866|ref|YP_001772521.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
4-46]
gi|168198140|gb|ACA20087.1| Rieske (2Fe-2S) domain protein [Methylobacterium sp. 4-46]
Length = 354
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 24/256 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ + +T+ ++ IV+ + G L +DRCPHR LS G+L++GRL
Sbjct: 24 WYCVGESRRFREGRLCAVTLGEEAIVVGRAAGGGLFALRDRCPHRGMALSAGRLVEGRLV 83
Query: 188 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C +HGW+F +G+C IP L A D R+ + + V+E+ G+VW+ + P PD
Sbjct: 84 CPFHGWEFRPDGQCAAIPALAARDESDFRTVRLPRFSVREASGLVWIAAGE---PRPDAP 140
Query: 247 PWFE-NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD----RTDYSAKREDAQ- 300
P E F G + E +D L + +DPAH+ HD RT + + ++
Sbjct: 141 PIPEVEFPYAGMLVETLEVEASFDLVAL--SFVDPAHVAYVHDLWWWRTSKTLREKEKHF 198
Query: 301 ---PLGFEVTERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNNRESVDNKTGEKHYST 356
P GF +T + + + G++P + F P V + GEK +
Sbjct: 199 APSPFGFTMTSHRAKSASAVY--RLLGAVPEVEIEFRLPGVRLER-----IRAGEKRIAN 251
Query: 357 GLFLCRPTGQGKSMLI 372
F P G G++ L+
Sbjct: 252 YTF-ATPLGPGRTALV 266
>gi|170690208|ref|ZP_02881375.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
gi|170144643|gb|EDT12804.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
Length = 344
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 139 DDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEG 197
DD P T+ + IVL+K G+ +DRC HR AKLS+G + DG + C YHGW ++
Sbjct: 23 DDGPKPFTLLGENIVLWKGAGGKPHALRDRCCHRTAKLSKGFVDSDGNIACGYHGWTYDC 82
Query: 198 EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGF 257
G+CVKIPQ A +IP A V++Y +E G WV + + P +P F PG+
Sbjct: 83 TGQCVKIPQNGA-GEIPSRAVVQSYRCEERYGYAWVALDEPLQP----IPEFPEETAPGY 137
Query: 258 QDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAG 316
+ + +E + ++EN D AH H ++++ + +P +E G
Sbjct: 138 RRILQFYEQWNTSPLRMMENSFDNAHFSFVH-KSNFGLF-DQPRPSKYEFR-------PG 188
Query: 317 QWGREKDGSMP 327
+WG E + +P
Sbjct: 189 EWGFEAETRVP 199
>gi|330992786|ref|ZP_08316730.1| Chlorophyllide a oxygenase [Gluconacetobacter sp. SXCC-1]
gi|329760264|gb|EGG76764.1| Chlorophyllide a oxygenase [Gluconacetobacter sp. SXCC-1]
Length = 333
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 93/192 (48%), Gaps = 14/192 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ ++ DAP + Q IV+++D G DRCPHR A+LS G + +GR+
Sbjct: 15 WYCLFPMHEL-SDAPRAFRLLGQDIVVWRDEDGRPHAVIDRCPHRSARLSGGTVEEGRIV 73
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 246
C YHGW F G+G+CV +PQ +A P+ V+ E G VWV P P L
Sbjct: 74 CPYHGWAFRGDGRCVSVPQSVTNAG-PQFG-VKALHCTERYGQVWV-----CPGEPAFDL 126
Query: 247 PWFENFARPGFQDVSTIHE-LPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P +F +PG++ + E ++EN D AH H S D P +
Sbjct: 127 PHVPHFEKPGYRQIFEFSEDWACSAQRIIENEFDTAHFSFVH---KGSFGDSDPAPARTD 183
Query: 306 VTERTDRGFAGQ 317
+TE T+ GF +
Sbjct: 184 ITE-TETGFVAE 194
>gi|258512017|ref|YP_003185451.1| Rieske (2Fe-2S) domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478743|gb|ACV59062.1| Rieske (2Fe-2S) iron-sulphur domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 327
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + PL V + +VL++D G +R C HR A L+ G+ G L
Sbjct: 19 WYAVCFSAQLTRRRPLAARVAGRDLVLFRDASGHVRALSRYCTHRGADLALGRAEGGHLA 78
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT-PPNPDKL 246
C YHGWQF+G+G+C IP P D IP A R Y E G+ WV++ +T PP P
Sbjct: 79 CAYHGWQFQGDGRCTLIPAHP-DRPIPDFAHNRAYPACERGGIAWVYLGGETSPPEPRVF 137
Query: 247 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+ + ++DV H + ++E+++D AH+ H +T
Sbjct: 138 SELTDGSYRLVPYEDVWQAHL-----TRVVESVLDVAHLAFVHRKT 178
>gi|163745312|ref|ZP_02152672.1| vanillate O-demethylase oxygenase, putative [Oceanibulbus indolifex
HEL-45]
gi|161382130|gb|EDQ06539.1| vanillate O-demethylase oxygenase, putative [Oceanibulbus indolifex
HEL-45]
Length = 346
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
+TV ++I +++ GEL +D CPHR LS+G++ +EC YHG F+ G+CV
Sbjct: 23 ITVLGEKICVFRSEAGELVGLEDACPHRKLPLSKGRIKGDTVECGYHGLTFDCAGQCV-- 80
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 263
P +IP +A V Y + E G+VW+WM +P + EN+ P + +
Sbjct: 81 -WAPGTGRIPSNAKVHAYPLHEKYGLVWIWMGNPALADPSDIFEIENYDNPDWGINRGEA 139
Query: 264 HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTE 308
EL ++ ++ +NL+DP H+ H + +A +D PL TE
Sbjct: 140 MELDCNYLLMCDNLLDPTHVAWVHQSSFAAAATKDT-PLRITKTE 183
>gi|428778765|ref|YP_007170551.1| ring-hydroxylating dioxygenase, large terminal subunit
[Dactylococcopsis salina PCC 8305]
gi|428693044|gb|AFZ49194.1| ring-hydroxylating dioxygenase, large terminal subunit
[Dactylococcopsis salina PCC 8305]
Length = 349
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D P + + +VL+ D G + +DRC HR A+LS G++ +G L
Sbjct: 32 WYPV-IPLDQIQSEPKHFQLLGENLVLWTDQSGHSKAAKDRCCHRSAQLSLGKVENGNLV 90
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW FEG G CV++PQL KIP++ + TY + G WV + + P D +P
Sbjct: 91 CPYHGWTFEGSGSCVRVPQLEDQEKIPKTYRIETYWCQSRYGYAWVCLGEN--PLAD-IP 147
Query: 248 WFENFARPGFQDVSTIHELPYDHSIL--LENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+ P F+ + +E P+ + L +EN +D AH H T E P +
Sbjct: 148 EIPEASDPEFRCIPEFYE-PWHCAGLRVMENELDLAHPTFVH--TGTFGSEEHPVPDEMD 204
Query: 306 VTE 308
+TE
Sbjct: 205 ITE 207
>gi|440232282|ref|YP_007346075.1| ring-hydroxylating dioxygenase, large terminal subunit [Serratia
marcescens FGI94]
gi|440053987|gb|AGB83890.1| ring-hydroxylating dioxygenase, large terminal subunit [Serratia
marcescens FGI94]
Length = 347
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V ++ P+G+T +QQIVL++D +G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLEQQIVLWRDAQGAIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G+G+ +P + + C+R+Y +E+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGEVKDVPAVDR-CPLVGQKCLRSYPAQEAHGAVFLYFGVTADEAPPELI 141
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ + A + + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPQELADEAAYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 307 TERTDRGF 314
TD GF
Sbjct: 202 ---TDSGF 206
>gi|428221280|ref|YP_007105450.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427994620|gb|AFY73315.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 370
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYPL +K++ PL +T + I+L + KG+L +DRC HR L G + R++
Sbjct: 43 WYPLARSKNLRIGKPLAVTFAGEPIMLVRPEKGDLFALEDRCAHRQIPLHLGVVRGERVQ 102
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YH W ++ +G CV IP L +P V +Y V+E+ G+++V+ + P
Sbjct: 103 CHYHCWTYDRQGSCVNIPYLDGQKHLPNG--VHSYPVREAYGLIFVYTGDLNASGFSQFP 160
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
+ FA P ++ + +S + ENLMD H
Sbjct: 161 EVQTFANPKYKTRILDRSISCHYSFMHENLMDMNH 195
>gi|340777753|ref|ZP_08697696.1| vanillate O-demethylase oxygenase subunit [Acetobacter aceti NBRC
14818]
Length = 349
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 14/218 (6%)
Query: 123 DWT---EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
DWT W+P+ L++++ APLG+T+ D +VLY+ G G + D CPHR LS G
Sbjct: 22 DWTILAACWHPVALSRELTHSAPLGVTLLDAPLVLYRSG-GSIVVADDLCPHRGVPLSMG 80
Query: 180 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS-QK 238
L C YHG++F EG+CV +P P D+ IP+ +RTY E G++W +
Sbjct: 81 TCKGDLLACAYHGFEFGAEGRCVHVPAHP-DSGIPKKLNLRTYPAVERYGLIWTCLRPDG 139
Query: 239 TPPNPDKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDYSAKRE 297
+ P +P +++ P +Q ++ ++ +E +D AH H T ++
Sbjct: 140 SGPKIADMPHWDD---PTYQQITCPWIDIAGFAGRQVEGFIDVAHFAFVHTAT-FADPEN 195
Query: 298 DAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAP 335
P + +RT GF ++ R + P+ + AP
Sbjct: 196 PVVPS--YMPKRTSYGFEAEY-RSSVANYPHEIENSAP 230
>gi|407773414|ref|ZP_11120715.1| vanillate monooxygenase [Thalassospira profundimaris WP0211]
gi|407283878|gb|EKF09406.1| vanillate monooxygenase [Thalassospira profundimaris WP0211]
Length = 338
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 142 PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 201
P+ T+ ++ +VLY+ L +D CPHRL LS+G + RL C YHG +F+G+G C
Sbjct: 20 PVARTICNENVVLYRRADRSLVALEDSCPHRLLPLSQGYVEGDRLVCGYHGLEFDGDGAC 79
Query: 202 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVS 261
V +P I ACVR Y V E VWVW+ K + +P + + G+
Sbjct: 80 V---HMPNQQSIHPEACVRAYPVVEKDRFVWVWIGDKEKADEALVPDIPHASEEGWVFDG 136
Query: 262 TIHELPYDHSILLENLMDPAHIPISH 287
+++ + +L++NLMD +H H
Sbjct: 137 GTYDVKCGYELLVDNLMDLSHETYVH 162
>gi|195984490|gb|ACG63835.1| SxtDIOX [Lyngbya wollei]
Length = 334
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 147/348 (42%), Gaps = 44/348 (12%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGKGELRCHQDRCPHRLAKLS 177
AD WY + +D + + ++VL++ + ++ QD CPHR LS
Sbjct: 4 ADLILINNWYVVAKVEDCRPGSITTAHLLGVKLVLWRSHEQNSPIQVWQDYCPHRGVPLS 63
Query: 178 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 237
G++ + L C YHGW++ GKCV+IP P D P SA +TY +E G+VWV +
Sbjct: 64 MGEVANNTLVCPYHGWRYNQAGKCVQIPAHP-DMVPPASAQAKTYHCQERYGLVWVCLG- 121
Query: 238 KTPPNP-DKLPWFENFARPGFQDVST----IHELPYDHSILLENLMDPAHIPISHDRTDY 292
NP + +P F + P + T I P+ +++N +D +H P H+
Sbjct: 122 ----NPVNDIPSFPEWDDPNYHKTYTKSYLIQASPFR---VMDNSIDVSHFPFIHEGI-- 172
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQW--------GREKDGSMPNFLRFEAPCVLQNNRES 344
R A+ EV D G++ KD SM N+ R P + E+
Sbjct: 173 LGDRNHAEVEDLEVKVDKDGLTMGKYQVHTSKFNNSTKDDSMVNWFRLSHPLCQYCSTEA 232
Query: 345 VDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPW-IKLFPDWYFHQSASKVFEQD 403
+ +T L + P + S+L G+ K+ D+ +V E+D
Sbjct: 233 SEMRT------VDLMVVTPIDEDNSVLRYLIMWNGSKTLESKILADY------DQVIEED 280
Query: 404 MGFLSSQN----EVLLKEKVPTKELYFNLRS-IDTWVAEYRKWMDKAG 446
+ L SQ +L +++ T+ L + D YR+W+ + G
Sbjct: 281 IRILHSQQPTRLPLLSPKQINTQGLPQEIHVPSDRCTVAYRRWLKELG 328
>gi|386825233|ref|ZP_10112359.1| Rieske (2Fe-2S) domain-containing protein [Serratia plymuthica
PRI-2C]
gi|386377835|gb|EIJ18646.1| Rieske (2Fe-2S) domain-containing protein [Serratia plymuthica
PRI-2C]
Length = 347
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V ++ P+G+T +QQIV+++DG+G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLEQQIVVWRDGEGGIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G+G +P + + C+R+Y KE+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGITADEAPPELT 141
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ + A + + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPQELADEVSYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 307 TERTDRGF 314
TD GF
Sbjct: 202 ---TDTGF 206
>gi|410686729|ref|YP_006963032.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
pickettii]
gi|388482580|gb|AFK33102.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
pickettii]
gi|403398307|gb|AFR43891.1| putative vanillate O-demethylase oxygenase chain A [uncultured
bacterium]
Length = 358
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 143 LGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 202
L T+ +Q +V ++ +G + DRC HR LS G+LI ++C YHG F G+G C
Sbjct: 21 LARTLLEQPVVFFRRNEGSVAALADRCSHRRVSLSLGRLIGDEVQCGYHGLTFAGDGSCT 80
Query: 203 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 262
I P +++P SACVR+Y V E G VW+W N +P + G
Sbjct: 81 SI---PGQSRVPPSACVRSYPVVERDGFVWIWPGDPALANETLVPDYAEICSSGRYVGRP 137
Query: 263 IHELPYDHSIL--LENLMDPAHIPISHDRT 290
L + L +EN++D +H+ +H T
Sbjct: 138 AEALLVEAPFLFNIENVLDLSHVTYAHPET 167
>gi|75462888|sp|Q9AHG3.1|TSAM2_COMTE RecName: Full=Putative toluene-4-sulfonate monooxygenase system
iron-sulfur subunit TsaM2; AltName:
Full=Toluenesulfonate methyl-monooxygenase oxygenase
component TsaM2
gi|13661652|gb|AAK37996.1| monooxygenase TsaM2 [Comamonas testosteroni]
Length = 346
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + D PL T ++++VL++ G +DRC HRLA LS G + D +
Sbjct: 7 WYVAGMATDC-SRKPLARTFLNEKVVLFRTHDGHAVALEDRCCHRLAPLSLGDVEDAGIR 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL- 246
C YHG F G CV+I P +IP CVR + + E G++W+WM NPD +
Sbjct: 66 CRYHGMVFNASGACVEI---PGQEQIPPGMCVRRFPLVERHGLLWIWMGDPARANPDDIV 122
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
N A D IH ++ ++++NL+D H+ H T
Sbjct: 123 DELWNGAPEWRTDSGYIH-YQANYQLIVDNLLDFTHLAWVHPTT 165
>gi|427739322|ref|YP_007058866.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374363|gb|AFY58319.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 340
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 135/298 (45%), Gaps = 17/298 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + L+ + + L T+ + + +++ G+ +DRC HR ++LS+G++ G++E
Sbjct: 7 WYVVALSNQLKPNKVLSRTILGEWLAIFRGEDGKPVALRDRCIHRNSRLSKGKVCQGKIE 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP--NPDK 245
C YHGW ++ G+ VK+P + + A + Y+ KE G ++V +S + P K
Sbjct: 67 CPYHGWVYDNTGRVVKVPSQANNLCQSKMARCQLYQTKEQDGYIYVRLSSQPSEEFTPFK 126
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+P ++ +PG++ V I+ + + EN +D H H ++K+ Q L
Sbjct: 127 MPLYQ---QPGWETVKVINRFNNNVTNCAENFIDVPHTASVHPGIFRNSKK---QQLEMT 180
Query: 306 VTERTDRGFAGQWGREKD-GSMPNFLRFEAPCVLQNNRESVDNKTGEKHY---STGLFL- 360
V R+ FA + G FL + + + + N T ++ + LF+
Sbjct: 181 VERRSGSVFAEYRNETTNLGWFSKFLNRKGYKIRHTDSFHMPNVTSVEYNMSPNRRLFIT 240
Query: 361 --CRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLK 416
C P + S L+ + T W KL H + + QD+ L Q EV+ K
Sbjct: 241 SQCVPETEN-STLVYTYITYNYGIWNKLVKP-LVHWTTQHIIRQDIEALKIQWEVIEK 296
>gi|428226501|ref|YP_007110598.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Geitlerinema
sp. PCC 7407]
gi|427986402|gb|AFY67546.1| Rieske (2Fe-2S) iron-sulfur domain protein [Geitlerinema sp. PCC
7407]
Length = 365
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + + +TV+ Q I +Y+D +G + +D CPH+ L +G ++ L
Sbjct: 26 WYAVSWSDRLKPGQVIAVTVWQQAIAVYRDTEGNVHALEDACPHKGVALHKGLVLGQNLA 85
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+ +G+C KIP LP K+P A R+Y + + ++W++ +P
Sbjct: 86 CRYHGWEFDSQGECAKIPYLPPSQKLP-CAKARSYPICDRYNLLWIFPGDPALAETTPVP 144
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
F +PG+ V SI EN MD H
Sbjct: 145 HIAEFDQPGYLMVPVTGHFKAHFSICNENSMDVFH 179
>gi|388569563|ref|ZP_10155955.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
gi|388263312|gb|EIK88910.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
Length = 339
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 8/179 (4%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D P T+ + IVL+ D GE +DRC HR AKLS+G +G ++C YHGW + EG
Sbjct: 24 DGPQPFTLLGENIVLFLDEHGEPAALKDRCCHRTAKLSKGWCKNGNIQCGYHGWVYNREG 83
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 259
+ V+IPQ AD +IP+ Y G WV + + P D +P F PG++
Sbjct: 84 RVVEIPQYGADREIPKDYGTPAYRCVARHGYAWVALEE---PEAD-IPEMPEFGAPGWRT 139
Query: 260 VSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
+ +E + LEN D +H H T A + +P +E+ E D+GF +
Sbjct: 140 IFQFYETWQTSPVRALENSFDNSHFSFVHRATFGVAAQ--PKPSKYELIE-NDQGFYAE 195
>gi|92112267|ref|YP_572195.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91795357|gb|ABE57496.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 343
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V + PLG+T + +VL++D +GE+ +DRCPHR A+LS G + RL
Sbjct: 23 WYPVVASWEVGSE-PLGITRLGENLVLWRDHQGEIHAIEDRCPHRGARLSMGWNLGDRLA 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + + G +P + A++ + CVR Y V+E+ G V+V+ + P L
Sbjct: 82 CWYHGVEVDNAGVVRDVPAI-ANSPLVDKPCVRRYPVQEANGAVFVYFAATADETPAPLT 140
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
E A + + ++ ++N+MDP H H + A+ + + E
Sbjct: 141 LPEQLADETAYANFVCTASWQCNYQYAVDNVMDPMHGTYLHANSHSMAEGDRQAEMALEP 200
Query: 307 TERTDRGF 314
TD GF
Sbjct: 201 ---TDSGF 205
>gi|398385455|ref|ZP_10543476.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
gi|397720406|gb|EJK80963.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
Length = 355
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 146 TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 205
T+ Q +VL++ GE+ +DRC HR LSEG +I + C YHG +F +G CV I
Sbjct: 36 TILGQPLVLFRTEGGEVSALEDRCCHRAMPLSEGVVIGESIRCPYHGLEFGTDGACVHI- 94
Query: 206 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE 265
PA KIPR+A VR + + E ++W+WM + +P P + S ++
Sbjct: 95 --PAQDKIPRTARVRHFPLVEKDALLWIWMGDADKADIAIIPDHPYHQDPAWAWRSAHYD 152
Query: 266 LPYDHSILLENLMDPAHIPISHDRT 290
+ + +L++NLMD +H+P H T
Sbjct: 153 VQGNWQLLVDNLMDLSHLPYIHPST 177
>gi|319651032|ref|ZP_08005167.1| hypothetical protein HMPREF1013_01777 [Bacillus sp. 2_A_57_CT2]
gi|317397388|gb|EFV78091.1| hypothetical protein HMPREF1013_01777 [Bacillus sp. 2_A_57_CT2]
Length = 336
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 148/331 (44%), Gaps = 33/331 (9%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
EW+P+ +++ +D P + V +++ ++++ KG + +D C HR A LS G++ +G L
Sbjct: 9 EWHPVCKAEELLED-PKQVFVLGERVAIFRNEKG-VHAFKDLCIHRGAALSLGKVKNGNL 66
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YH W+++ G C KIP LP+ IP A Y +E G++WV + + +P L
Sbjct: 67 VCAYHAWEYDCTGACEKIPALPSGRAIPSKARATVYHCEEYLGLIWVNLGE----DPAPL 122
Query: 247 PWFENFARPGFQD-VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
F ++ G++ + +E+ + ++EN +D +H+ H+ + A+ + ++
Sbjct: 123 VSFPEYSMEGYRTAICGPYEVKANAPRIIENFLDVSHLMFVHE--GLLGDEDHAEVVDYK 180
Query: 306 VTERTDRGFAGQW--------GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG 357
V +R + GR K G P + + + G T
Sbjct: 181 VEFVDNRLITSKIPVYQPNPDGRSKGGYADYVYEILNPTTARFTKTT----EGSDDELTI 236
Query: 358 LFLCRPTG--QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLL 415
L Q K+ +++ T + PD F + +F QD+ + SQ LL
Sbjct: 237 LLAVNQEDHEQAKAFMLL------TRNYDLDMPDEPFIEFQDTIFYQDLDIVQSQKPELL 290
Query: 416 KEKVPTKELYFNLRSIDTWVAEYRKWMDKAG 446
+ + +L+S D YRKW+++ G
Sbjct: 291 PLDLQAE---LHLKS-DALTIAYRKWLNELG 317
>gi|224148289|ref|XP_002336625.1| predicted protein [Populus trichocarpa]
gi|222836377|gb|EEE74784.1| predicted protein [Populus trichocarpa]
Length = 144
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 110 EEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDR 168
E E + +DW +WYP+ D+ P TV +V++ D + E + D
Sbjct: 13 EAELEAVSQEEKFDWYAQWYPVMPVCDLDKRVPHAKTVMGLDLVVWWDRNESEWKVFDDS 72
Query: 169 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEV 224
CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D ACV Y
Sbjct: 73 CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGNCKFIPQAPPDGPPVHTSMKACVAVYPS 132
Query: 225 KESQGVVWVW 234
G+VW W
Sbjct: 133 TVHHGIVWFW 142
>gi|453063376|gb|EMF04356.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Serratia
marcescens VGH107]
Length = 336
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V ++ P+G+T +QQIV+++D +G++ +DRCPHR A+LS G + R+
Sbjct: 13 WYPVLASWEVGNN-PVGITRLEQQIVVWRDAEGQIHALEDRCPHRGARLSMGWNLGDRIA 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G+G +P + + C+R+Y KE+ G V+++ P KL
Sbjct: 72 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGVTADEAPAKLT 130
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ + A + ++ LEN+MDP H H + A+ + + E
Sbjct: 131 FPQELADEASYSHFLCTASWNCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 190
Query: 307 TERTDRGF 314
TD GF
Sbjct: 191 ---TDSGF 195
>gi|53721314|ref|YP_110299.1| Rieske iron-sulfur protein [Burkholderia pseudomallei K96243]
gi|52211728|emb|CAH37726.1| putative rieske iron-sulfur protein [Burkholderia pseudomallei
K96243]
Length = 315
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 130 PLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRLEC 188
P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++ DGRL+C
Sbjct: 2 PVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRVTPDGRLQC 61
Query: 189 LYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
YHGW ++G G CV IP L A ++P Y+ E G +W ++ PP + +P
Sbjct: 62 AYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWA-CARDAPPPAEAIP 120
Query: 248 WFENFAR 254
AR
Sbjct: 121 RAPRSAR 127
>gi|423529620|ref|ZP_17506065.1| hypothetical protein IGE_03172 [Bacillus cereus HuB1-1]
gi|402448102|gb|EJV79950.1| hypothetical protein IGE_03172 [Bacillus cereus HuB1-1]
Length = 303
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 147 VFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 206
V + VLY+D KGE++ CPHR A LS GQ+++G+L C YHGW+F+ G CV+IP
Sbjct: 19 VAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLVCPYHGWEFDSCGTCVRIPS 78
Query: 207 LPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKLPWFEN--FARPGFQDVSTI 263
P + IP+ A +Y V+E G++W++ S++TPP EN F F
Sbjct: 79 QP-NKPIPKFAHTFSYPVREKIGLIWIYPDSEETPPEWQTFHVMENTPFKLSFFHATWNA 137
Query: 264 HELPYDHSILLENLMDPAHIPISHDRT 290
H + +E+++D AH+ H +T
Sbjct: 138 HL-----TRSIESVLDTAHLAYIHKKT 159
>gi|89056443|ref|YP_511894.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88865992|gb|ABD56869.1| vanillate demethylase subunit A [Jannaschia sp. CCS1]
Length = 340
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 4/192 (2%)
Query: 146 TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 205
T + +VLY+ G +D CPHR LS+G L +EC YHG F+ G CV P
Sbjct: 24 TFLGENVVLYRKQDGTPVALEDACPHRKLPLSDGALQGDTVECGYHGLTFDCAGACVAAP 83
Query: 206 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVS-TIH 264
DA IP+ A V++Y V + W+WM +PD + NF P + +
Sbjct: 84 T-QKDA-IPKRATVKSYPVVDRYRFTWIWMGDPAEADPDLIFPIPNFDDPTWGKTDGGVL 141
Query: 265 ELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDG 324
++ ++ +++NL+DP+H+ H T ++ D PL + TE + +G
Sbjct: 142 DIDCNYLWVVDNLLDPSHVAWVH-VTSFAGGGTDGAPLQVDKTEHGVQVTRWIFGEPPSP 200
Query: 325 SMPNFLRFEAPC 336
N L F+ PC
Sbjct: 201 YYENLLAFQGPC 212
>gi|228969704|ref|ZP_04130484.1| hypothetical protein bthur0004_63620 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|423563125|ref|ZP_17539401.1| hypothetical protein II5_02529 [Bacillus cereus MSX-A1]
gi|228789998|gb|EEM37800.1| hypothetical protein bthur0004_63620 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|401199353|gb|EJR06256.1| hypothetical protein II5_02529 [Bacillus cereus MSX-A1]
Length = 303
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 147 VFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 206
V + VLY+D KGE++ CPHR A LS GQ+++G+L C YHGW+F+ G CV+IP
Sbjct: 19 VTGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLVCPYHGWEFDSCGTCVRIPS 78
Query: 207 LPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKLPWFEN--FARPGFQDVSTI 263
P + IP+ A +Y V+E G++W++ S++TPP EN F F
Sbjct: 79 QP-NKPIPKFAHTFSYPVREKIGLIWIYPDSEETPPEWQTFHVMENTPFKLSFFHATWNA 137
Query: 264 HELPYDHSILLENLMDPAHIPISHDRT 290
H + +E+++D AH+ H +T
Sbjct: 138 HL-----TRSIESVLDTAHLAYIHKKT 159
>gi|428305773|ref|YP_007142598.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Crinalium
epipsammum PCC 9333]
gi|428247308|gb|AFZ13088.1| Rieske (2Fe-2S) iron-sulfur domain protein [Crinalium epipsammum
PCC 9333]
Length = 340
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 130/300 (43%), Gaps = 21/300 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + L+ ++ + L TV + + +++ G+ +DRC HR ++LS G++ G L+
Sbjct: 7 WYVVALSTELKPNKVLSCTVLGEWLAIFRGDDGKSVALRDRCMHRNSRLSRGKVCQGNLQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP--NPDK 245
C YHGW ++ GK V +P + K+ S + Y+ KE G V+V ++ + P K
Sbjct: 67 CPYHGWVYDKNGKVVAVPAEGDNFKMLDSRQAKLYQTKEQDGYVYVRLTDQPSEEFEPFK 126
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDYSAKR 296
+P+ + PG++ V I+ + + EN +D H H + + + +R
Sbjct: 127 MPY---YGEPGWETVRVINRFHNNVTNCAENFIDIPHTASVHPGVFRTPRKQKLEMTVER 183
Query: 297 EDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYST 356
D L E T+ G+ + K + + F P N SV+ G+ +
Sbjct: 184 RDGSVLVNYRNETTNLGWYKHFLNPKGDEIKHTDSFYMP-----NITSVEYNMGK--HRR 236
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLK 416
+ + ++ +V T + + H +A + QD+ L Q EV+ K
Sbjct: 237 FFITSQSIPETENSTLVYTDVTFNYGILNKIARPFVHWTAQHIINQDVEILGIQQEVIEK 296
>gi|26989931|ref|NP_745356.1| Rieske 2Fe-2S family protein [Pseudomonas putida KT2440]
gi|24984845|gb|AAN68820.1|AE016514_9 Rieske 2Fe-2S family protein [Pseudomonas putida KT2440]
Length = 341
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGRL 186
WY L L +D P T+ + +VL+K G +DRC HR AKLS+G + +G +
Sbjct: 13 WYAL-LPMTALEDGPKPFTLLGEALVLWKRPDGTPVAMRDRCCHRTAKLSKGFVSAEGNI 71
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+++ G CVKIPQ P A IP A V+ Y +E G WV + P +
Sbjct: 72 ACGYHGWEYDCTGTCVKIPQSPTGA-IPPGAAVKAYHCQEKYGYAWVSLDDPLQP----I 126
Query: 247 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P F PG++ + +E + ++EN D +H H + ++ + QP +E
Sbjct: 127 PEFPEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVH-KANFGLF-DQPQPASYE 184
Query: 306 VTERTDRGFAGQ 317
E TD GF +
Sbjct: 185 FRE-TDYGFEAE 195
>gi|312197430|ref|YP_004017491.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Frankia sp.
EuI1c]
gi|311228766|gb|ADP81621.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. EuI1c]
Length = 346
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRL 186
W+P+ + DV AP + + +VL++ G++ DRCPHR LS G + GRL
Sbjct: 28 WHPVARSTDV-RAAPAHAELCEVPLVLWRRPSGDVAALVDRCPHRGVPLSGGAVDPAGRL 86
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM---SQKTPPNP 243
C YH W F+G G+CV IPQ P IP R V+E+ G+VW + +Q+ P P
Sbjct: 87 RCGYHAWAFDGAGRCVDIPQQPGQ-NIPDVIAARPVRVEEAAGLVWACLVDETQQARPRP 145
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
+ P E+ P + V T+ + + +EN D H + H T +A+ +P
Sbjct: 146 -RFPQIEDLGWPSY--VGTVQDWTGQAARQVENFCDIGHFSVLHTDTFGNAEVLAVEPYA 202
Query: 304 FEVTERT 310
T+ T
Sbjct: 203 VHRTDWT 209
>gi|414341442|ref|YP_006982963.1| vanillate O-demethylase oxygenase subunit [Gluconobacter oxydans
H24]
gi|411026777|gb|AFW00032.1| vanillate O-demethylase oxygenase subunit [Gluconobacter oxydans
H24]
Length = 351
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 123 DW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
DW + WYP+ L++D+ D+P+G+T+ D +V+Y+ G++ D CPHR LS G
Sbjct: 25 DWQILAKSWYPVALSRDL-GDSPMGVTLLDAPLVVYR-VDGDIVIADDLCPHRGVPLSMG 82
Query: 180 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
+ C YHG++F +G+CV++P P D+KIP +RTY V E G++W + +
Sbjct: 83 NGNGKTIACAYHGFRFGQDGRCVRVPAHP-DSKIPPKLHLRTYPVVERFGLIWTCLRPEG 141
Query: 240 PPNPDKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDYSAKRED 298
N +P +++ P FQ ++ ++ +E +D AH H T+ A E+
Sbjct: 142 DVNLPPMPHWDD---PAFQQITCPWIDIKGFAGRQVEGFIDVAHFAFVH--TETFADPEN 196
Query: 299 AQPLGFEVTERTDRGFAGQW 318
L + + T+ GF ++
Sbjct: 197 PIVLAYS-PKLTETGFEAEY 215
>gi|365894174|ref|ZP_09432329.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425021|emb|CCE04871.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 337
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 96/191 (50%), Gaps = 10/191 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L + D D P T+ + IVL+ D KGE +DRC HR AKLS+G +G +
Sbjct: 13 WYAL-MPVDHLKDGPKPFTLLGEPIVLFLDAKGEPAALEDRCCHRTAKLSKGWCNNGNIV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+++ +GK V IPQ P + +P A R++ G VWV + + P D +P
Sbjct: 72 CGYHGWEYDRDGKLVMIPQFPFEQPVP-EAKARSFRATARYGYVWVALDE---PLSD-IP 126
Query: 248 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
PG++ ++ ++ ++ L+EN D AH H T +P +E+
Sbjct: 127 SIPEDDMPGYRRINQFYDKWNTAALRLMENSFDNAHFAFVHKGT--FGDINQPKPEKYEI 184
Query: 307 TERTDRGFAGQ 317
E +D GF +
Sbjct: 185 VE-SDAGFDAE 194
>gi|374573646|ref|ZP_09646742.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM471]
gi|374421967|gb|EHR01500.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM471]
Length = 353
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 145/337 (43%), Gaps = 53/337 (15%)
Query: 141 APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 200
A L T+ + +V+Y+ G + +D C HRL LS+G+L + C YHG ++ +G+
Sbjct: 22 ALLPRTICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGR 81
Query: 201 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGF 257
C +P+ I SACVR Y V E +W+WM +P +P W + A G
Sbjct: 82 CTF---MPSQETINPSACVRAYPVVERHRYIWLWMGDPALADPALVPDLHWNHDPAWAG- 137
Query: 258 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTE--------R 309
D TIH + D+ ++L+NLMD H H S E F+VT R
Sbjct: 138 -DGKTIH-VNCDYRLVLDNLMDLTHETFVHGS---SIGNEAVAEAPFDVTHGEKTVTVTR 192
Query: 310 TDRG------FAGQWGRE--KDGSMP--NFLRFEAPCVLQNNRESVDNKTG--EKHYSTG 357
RG +A Q G+E K G + +RFEAPC + + TG E S G
Sbjct: 193 WMRGIEAPPFWAKQLGKEPGKSGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQG 252
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQSASKVFEQDMGFL 407
+ G + + T T + F Y + S +F +D L
Sbjct: 253 V-------NGFVLNTITPETEKTCHYFWAFVRNYQLGEQRITTEIREGVSGIFHEDELIL 305
Query: 408 SSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+Q + ++ P + +++NL +ID RK +DK
Sbjct: 306 EAQQRAM--DENPDR-IFYNL-NIDAGAMWTRKLIDK 338
>gi|288961232|ref|YP_003451571.1| vanillate monooxygenase [Azospirillum sp. B510]
gi|288913540|dbj|BAI75027.1| vanillate monooxygenase [Azospirillum sp. B510]
Length = 384
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 146 TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 205
T+ +++VLY+ + +D C HRL LS+G+L L C YHG F EG+CV
Sbjct: 59 TICGKKLVLYRRSDDSVTALEDACWHRLLPLSKGRLEGDNLVCGYHGLVFNPEGRCVG-- 116
Query: 206 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE 265
+P+ I SACVR Y V E WVWM +P K+P P + +
Sbjct: 117 -MPSQETINPSACVRRYPVVERHRFAWVWMGDPALADPAKIPDMHWNHDPAWAGDGRLIR 175
Query: 266 LPYDHSILLENLMDPAHIPISH-----DRTDYSAKREDAQPLGFEVTERTDRG------F 314
+ D+ ++L+NLMD H H +R A E F R R +
Sbjct: 176 VKCDYRLVLDNLMDLTHETFVHSSSIGNRAVAEAPFETTHNDRFVTVTRWMRDIEAPPFW 235
Query: 315 AGQWGREKDGSMPNFLRFEAPCVL 338
A Q G+ + +RFEAPC +
Sbjct: 236 AKQLGKPGNVDRWQIIRFEAPCTI 259
>gi|358458104|ref|ZP_09168317.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357078670|gb|EHI88116.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 362
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 15/173 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYK------DGKGELRCHQDRCPHRLAKLSEGQL 181
W+P+ + DV AP+ + ++VL++ G G + DRCPHR LS G++
Sbjct: 38 WHPVARSSDV-GAAPVRALLLGVELVLWRRPTSGSAGPGTVAALVDRCPHRSVPLSSGEI 96
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 240
DGRL C YH W F+G G+CV IPQ P ++P R V E+ G+VW ++ +
Sbjct: 97 DADGRLRCSYHAWAFDGAGRCVDIPQQPGQ-RVPDLIAARPVRVAEAAGLVWACLADEAD 155
Query: 241 ---PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P P + P E+ P + V T+ + + +EN D H + H T
Sbjct: 156 EARPRP-RFPEIEDLGWPHY--VGTVQDWAGQAARQVENFCDVGHFSVLHTDT 205
>gi|49176900|ref|YP_025403.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
eutropha JMP134]
gi|72384285|ref|YP_293638.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
gi|39777480|gb|AAR31055.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
eutropha JMP134]
gi|72123638|gb|AAZ65781.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
Length = 358
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 143 LGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 202
L T+ +Q +V ++ G + DRC HR LS G+LI ++C YHG F G+G C
Sbjct: 21 LARTLLEQPVVFFRRNDGSVAALADRCSHRRVSLSLGRLIGDEVQCGYHGLTFAGDGSCT 80
Query: 203 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 262
I P +++P SACVR+Y V E G VW+W N +P + G
Sbjct: 81 SI---PGQSRVPPSACVRSYPVVERDGFVWIWPGDPALANETLVPDYAEICSSGRYVGRP 137
Query: 263 IHELPYDHSIL--LENLMDPAHIPISHDRT 290
L + L +EN++D +H+ +H T
Sbjct: 138 AEALLVEAPFLFNIENVLDLSHVTYAHPET 167
>gi|410942929|ref|ZP_11374670.1| vanillate O-demethylase oxygenase subunit [Gluconobacter frateurii
NBRC 101659]
Length = 351
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 123 DW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
DW WYP+ L++D+ D+P+G+T+ D +V+Y+ G++ D CPHR LS G
Sbjct: 25 DWQILARSWYPVALSRDL-GDSPMGVTLLDAPLVVYR-ADGDIVIADDLCPHRGVPLSMG 82
Query: 180 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
+ C YHG++F +G+CV++P P D+KIP +RTY V E G++W +
Sbjct: 83 NGNGKTIACAYHGFRFGQDGRCVRVPAHP-DSKIPPKLHLRTYPVVERFGLIWTCLR--- 138
Query: 240 PPNPDKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRT 290
P LP ++ P FQ ++ ++ +E +D AH H T
Sbjct: 139 PTGETNLPPMPHWDDPTFQQITCPWIDIKGFAGRQVEGFIDVAHFAFVHTET 190
>gi|390575016|ref|ZP_10255123.1| vanillate monooxygenase [Burkholderia terrae BS001]
gi|389932818|gb|EIM94839.1| vanillate monooxygenase [Burkholderia terrae BS001]
Length = 349
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++DV D + + ++LY+ G DRCPHR A LS G+ + +E
Sbjct: 8 WYAAAWSRDVGADLST-RELLGEPMLLYRKHDGAPVAMIDRCPHRFAPLSMGKRVGDGIE 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG QF+ G C K P D +IP A VR++ ++ G+VW+W + + + +P
Sbjct: 67 CGYHGLQFDCSGACSKNPH--GDGRIPPGARVRSFPAEDRHGLVWIWAGEPSRADASLIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
F + P + V + ++++NLMD +H+ H
Sbjct: 125 DFSHLVSPRLKTVGDEMTQKAHYELVVDNLMDLSHVNYLH 164
>gi|428210223|ref|YP_007094576.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428012144|gb|AFY90707.1| Rieske (2Fe-2S) iron-sulfur domain protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 364
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + + +T++ Q I +++D G+L D C H+ L +GQ+ L
Sbjct: 26 WYPVGWANKLQPGHIMPVTIWKQAIAVFRDTDGQLHALDDACAHKGVALHKGQIQGKHLL 85
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F G G+CVKIP LP K+P A VR+Y V+E ++W++ + LP
Sbjct: 86 CPYHGWEFNGAGQCVKIPYLPETHKLP-CAQVRSYPVREKYNLIWIFPGDASLATSIPLP 144
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
F P V +I EN MD H
Sbjct: 145 EIPEFDDPDCLMVPIPAHFQAHFTICNENTMDVFH 179
>gi|390575204|ref|ZP_10255311.1| Rieske (2Fe-2S) iron-sulfur domain containing protein [Burkholderia
terrae BS001]
gi|389933006|gb|EIM95027.1| Rieske (2Fe-2S) iron-sulfur domain containing protein [Burkholderia
terrae BS001]
Length = 357
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY DV + +T+ + +VLY+ G +D CPHR LS G+LI ++E
Sbjct: 7 WYVAAWDADVTHKL-MPVTILGEPVVLYRREDGTPVALEDACPHRKLPLSMGKLIGDQVE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ EG CV+ P P +IP A VR+Y + E G++W+WM + +
Sbjct: 66 CGYHGLTFDCEGACVRAPGSP---RIPPGAKVRSYPLAERYGLLWIWMGDADEADAATIV 122
Query: 248 WFENFARPGF----QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
+ + P + D T+ E Y + + +NL+DP+H+ H + +A E A+PL
Sbjct: 123 QIDEWGDPAWGVNRGDAMTV-ECHYLY--VTDNLLDPSHVAWVHPSSFGNAACE-AEPLK 178
Query: 304 FEVTERTDRGFAGQWGREKDGS--MPNFLRFEAPCVLQNNRE 343
EV +W R+ D + F+ FE C + + E
Sbjct: 179 TEVAAHGVT--VSRWMRDVDVAPFYAQFVGFEGRCDRKQHYE 218
>gi|227015885|gb|ACP17982.1| putative vanillate-O-demethylase oxidoreductase a-subunit
[Pseudomonas nitroreducens]
Length = 354
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + +++IV Y+ +G + +D CPHR A LS G + DG+L
Sbjct: 7 WY-VACTPDEIADKPLGRQICNEKIVFYRGAEGRVAAVEDFCPHRGAPLSLGFVRDGKLI 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + EGK + +P ++ C+++Y V+E G +WVW + +P +
Sbjct: 66 CGYHGLEMGCEGKTLAMP----GQRVQGFPCIKSYAVEERYGFIWVWPGDRELADPALIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
E P + ++ + D+ ++++NLMD H H + K D P+ V
Sbjct: 122 HLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVH-ASSIGQKEIDEAPVSTRVE 180
Query: 308 ERT 310
T
Sbjct: 181 GDT 183
>gi|221209772|ref|ZP_03582753.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD1]
gi|221170460|gb|EEE02926.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD1]
Length = 356
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + V + AP+G+T +QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQVSN-APVGITRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G G K+P + A+ + + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGIEVDGSGTVNKVPAV-ANCPLEGTKCVKSYPVEEKAGAIFLWFGDDAHREPAPLN 143
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ 300
+ + ++ ++N+MDP H H T +S D Q
Sbjct: 144 LPVELVADEYAHFLCMSNWKCNYQYAIDNVMDPMHGAYLH-ATSHSMAEGDKQ 195
>gi|295700277|ref|YP_003608170.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439490|gb|ADG18659.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 417
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 10/172 (5%)
Query: 128 WYPLYLTKDV--PDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
W P L+ ++ P AP + + + +V ++D G++ +++CPHR A L+ G +G
Sbjct: 27 WIPALLSSEIQEPGGAPKRVRLLGEDLVAFRDSDGKVGLLEEQCPHRRASLALGDNSEGG 86
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
L CLYHGW+F +G+C+ P P D+K+ Y V+E GV+W +M +P K
Sbjct: 87 LRCLYHGWKFAVDGQCMDTPTEPEDSKLCSRIKAVAYPVREVAGVIWTYMG-----DPAK 141
Query: 246 LPWFENFARPGF--QDVSTIHELP-YDHSILLENLMDPAHIPISHDRTDYSA 294
+P F +F + + V+ L +++ +E +D AH + H +SA
Sbjct: 142 VPQFPDFDFLSYPAEKVAAFKVLEDCNYAQAVEGTIDSAHAGVLHREQPWSA 193
>gi|254414093|ref|ZP_05027861.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179229|gb|EDX74225.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 371
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + P + + +Q+ VLY++ G++ D+CPHR A LS G + + L
Sbjct: 6 WYACEFSSAI-TQKPKQILMLNQRFVLYRNTHGQVVALNDQCPHRGAALSLGWVDNNCLR 64
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+ +GKC+ IP + IP+ A V +Y V+E G VW++ P LP
Sbjct: 65 CPYHGWKFQADGKCIDIPANAPEMPIPKKARVDSYPVQEKYGFVWLFYGDLPPEKRPPLP 124
Query: 248 WFENFARPGFQDVSTIHELPYD------HSILLENLMDPAHIPISHDRT 290
+F + +H + Y+ ++ ++E MD AH+ H ++
Sbjct: 125 TLPDFI------FANLHPVEYECTENAHYARIMEINMDFAHVIAVHKQS 167
>gi|254489200|ref|ZP_05102404.1| vanillate O-demethylase oxygenase subunit [Roseobacter sp. GAI101]
gi|214042208|gb|EEB82847.1| vanillate O-demethylase oxygenase subunit [Roseobacter sp. GAI101]
Length = 355
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 35/203 (17%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + D DD + LT+ Q IV+++ G+L +DRCPHRL LS+G+ I ++
Sbjct: 8 WYVAGWSTDFGDDL-VPLTLLAQNIVVFRCSDGQLAALEDRCPHRLLPLSKGKRIGDTIQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ G+CV++ P + +P SA V ++ V E G+V++WM + +K
Sbjct: 67 CGYHGMTFDAGGQCVRV---PGQSNLPTSAYVDSFPVLERHGIVFIWMG-----DAEKAD 118
Query: 248 WFENFARPGF-QDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDYSAKRE---- 297
F P +D +H + ++ + ENL+DPAH+ H T +A E
Sbjct: 119 TALAFDMPELSEDGWHLHHGDKLHIKANYLNVAENLVDPAHVSFVHPTTLGNAASENVPV 178
Query: 298 ----------------DAQPLGF 304
DA+P+GF
Sbjct: 179 HVKTADEAIVAWRWIRDAEPIGF 201
>gi|399909695|ref|ZP_10778247.1| vanillate monooxygenase [Halomonas sp. KM-1]
Length = 354
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG T+ ++ IVL++ +G + +D CPHR A LS G + DG+L
Sbjct: 12 WY-VACTPDEIADKPLGRTICNEPIVLFRGDEGRVAAVEDFCPHRGAPLSLGFVRDGKLV 70
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GKC +P ++ +R Y V+E G VW+W +P+ +P
Sbjct: 71 CGYHGLEMGCDGKCAGMP----GQRVRGFPSIRAYPVEERHGFVWLWPGDPEQADPNLIP 126
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
P + ++ + ++ ++++NLMD H H + + E+A P
Sbjct: 127 ELHWANNPDWAYGGGLYHIHCEYRLMIDNLMDLTHETYVHASSIGQPEIEEAAP 180
>gi|420249650|ref|ZP_14752889.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398063536|gb|EJL55262.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 357
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY DV + +T+ + +VLY+ G +D CPHR LS G+LI ++E
Sbjct: 7 WYVAAWDADVTHKL-MPVTILGEPVVLYRREDGTPVALEDACPHRKLPLSMGKLIGDQVE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ EG CV+ P P +IP A VR+Y + E G++W+WM + +
Sbjct: 66 CGYHGLTFDCEGACVRAPGSP---RIPPGAKVRSYPLAERYGLLWIWMGDADEADAATIV 122
Query: 248 WFENFARPGFQDVSTIHELPYD--HSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+ + P + V+ + D + + +NL+DP+H+ H + +A E A+PL E
Sbjct: 123 QIDEWGDPAW-GVNRGDAMTVDCHYLYVTDNLLDPSHVAWVHPSSFGNAACE-AEPLKTE 180
Query: 306 VTERTDRGFAGQWGREKDGS--MPNFLRFEAPCVLQNNRE 343
V +W R+ D + F+ FE C + + E
Sbjct: 181 VAAHGVT--VSRWMRDVDVAPFYAQFVGFEGRCDRKQHYE 218
>gi|428222533|ref|YP_007106703.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427995873|gb|AFY74568.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 345
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 95/192 (49%), Gaps = 12/192 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ ++ D P T+ +Q+IVL+ D G+ +D+C HR A+LS G + +G +
Sbjct: 13 WYPVIPIANL-SDGPKSFTLLEQKIVLWLDELGKPAAAKDQCCHRSAQLSLGTVENGAIV 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGWQF+ G CV IPQ + +P ++ + Y+ E G VWV + + P
Sbjct: 72 CPYHGWQFDRAGNCVHIPQ-SQNISVPSASRINAYKCTERYGYVWVCLDEPIAEVPTITE 130
Query: 248 WFENFARPGFQDVSTIHELPYDHSIL--LENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
FE P F+ + +E P+ + L +EN D AH H T ++ P E
Sbjct: 131 AFE----PNFRLIREFYE-PWKCAGLRVMENEFDFAHPTFVH--TGTFGSKDHPTPELLE 183
Query: 306 VTERTDRGFAGQ 317
+ E T G GQ
Sbjct: 184 IVE-TPEGLKGQ 194
>gi|384252197|gb|EIE25673.1| hypothetical protein COCSUDRAFT_39968 [Coccomyxa subellipsoidea
C-169]
Length = 468
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 84/164 (51%), Gaps = 20/164 (12%)
Query: 142 PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 201
P L + +Q+VL++DG+ + RC +D CPHR LSEG++ G L+C YHGW F +G+
Sbjct: 6 PHSLMLLGKQLVLWRDGEQQWRCFEDSCPHRKVPLSEGRVEQGGLQCGYHGWIFGSDGRP 65
Query: 202 VKIPQL-PADAKIPRSACVR------TYEVKESQGVVWVW-----------MSQKTPPNP 243
IPQL D K ++AC Y V+ QG++WVW + ++ NP
Sbjct: 66 THIPQLHSVDTKAEQTACASGRSCAAAYPVQVQQGLIWVWGEHGSTAFLESLQRQPAINP 125
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
K + + V+ I +LP +EN+ D +H+ +H
Sbjct: 126 LKAKTEPDKFTQTY--VNYIRDLPGGFQEWVENMTDQSHVAFAH 167
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 27/154 (17%)
Query: 390 WYFHQSASKVFEQDMGFLSSQNEV--LLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGH 447
W H + V + D+ F+ Q++ L K YF D V +R+W+ +
Sbjct: 294 WGPHLQLNAVNDGDIVFMHQQSKTNRLAGRKADYNRHYFTPGDSDRGVMAWRRWLTQKAG 353
Query: 448 GMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHC 507
G P Y P PAV P + +G +H L +R+ +H HC
Sbjct: 354 GGPVY--------PDTPAVD---------------PFRDSLGKLHRRELLDRHHQHTQHC 390
Query: 508 KGCRSAVKAFNTWKNSLS--TAAALLTALAILGA 539
C A++ + +L+ AA L +A LG+
Sbjct: 391 AACSKALQQVRAAQKALAGLCVAAFLGLVAFLGS 424
>gi|381162433|ref|ZP_09871663.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora azurea NA-128]
gi|418460036|ref|ZP_13031143.1| vanillate demethylase subunit A [Saccharomonospora azurea SZMC
14600]
gi|359739937|gb|EHK88790.1| vanillate demethylase subunit A [Saccharomonospora azurea SZMC
14600]
gi|379254338|gb|EHY88264.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora azurea NA-128]
Length = 377
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 135/341 (39%), Gaps = 49/341 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V PL T+ + L+++ +G D C HRLA LS+G+++ L+
Sbjct: 29 WYVAAWDHEVTTKKPLARTIAGVPLALWRNSEGRAVALADACWHRLAPLSKGKILGDELQ 88
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG ++ G+C +PA I SA V +Y V E VWVW+ +PD +P
Sbjct: 89 CPYHGLRYNATGRCTA---MPAQETINPSAMVPSYPVVERYRYVWVWVGDPDLADPDTVP 145
Query: 248 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
PG+ D TIH ++ ++L+NLMD H H S +E+ F+V
Sbjct: 146 DMHQMDDPGWAGDGETIHA-DCNYQLVLDNLMDLTHEEFVHAS---SIGQEELSEAEFDV 201
Query: 307 TERTDRGFAGQWGREKD----------GSMPNF---------LRFEAPCVLQNNRESVDN 347
+ +W R+ D P F + FEAP + +
Sbjct: 202 VHEGNTVTVTRWMRDIDPPPFWLKNMRDKFPGFEGKVDRWQIITFEAPSTICIDVGVAKA 261
Query: 348 KTG--EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQS 395
TG E S G+ G M + T + + F Y QS
Sbjct: 262 GTGAPEGDRSQGV-------NGYVMNTITPETHRSCHYFWAFMRNYRLDSQTITTQLRQS 314
Query: 396 ASKVFEQDMGFLSSQNEVLLKEKVPTKELY-FNLRSIDTWV 435
VF +D L +Q + + + P E Y N+ + WV
Sbjct: 315 VHGVFAEDEDMLRAQQDAI--DANPDHEFYSLNIDTGGMWV 353
>gi|83955042|ref|ZP_00963698.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
gi|83840371|gb|EAP79544.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
Length = 355
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + D D+ + LT+ Q +V Y+ G++ +DRCPHRL LS+G+ I ++
Sbjct: 8 WYVAGWSTDFGDEL-VPLTLLAQNLVAYRTSDGQIAVLEDRCPHRLLPLSKGKRIGDTIQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F +G CV++ P + +P+SA V +Y V E +V++WM +P
Sbjct: 67 CGYHGMTFGADGACVRV---PGQSNLPKSAYVDSYPVLERHDIVFIWMGDADKADPALAF 123
Query: 248 WFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDYSAKRE----- 297
+ G+ +H + ++ + ENL+DPAH+ H T +A E
Sbjct: 124 DLPELGQEGWH----VHHGDKLHIRANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVH 179
Query: 298 ---------------DAQPLGFEVTERTDRGFAGQWGR 320
DA+P+GF + GF+G R
Sbjct: 180 VKTADEVIVAWRWIRDAEPIGF---FKAFGGFSGNVDR 214
>gi|221068866|ref|ZP_03544971.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|220713889|gb|EED69257.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 441
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 128 WYPLYLTKDVPDDAPL-GLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
W P+ L +++ D P+ + V Q VL++D GEL CPHR A LS G+L DG L
Sbjct: 27 WQPVALKEELEGDRPIRAVKVLGQDFVLFRDENGELGMLDRDCPHRGADLSFGRLEDGGL 86
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C +HGW F+ +G C++ P PA +K+ + Y V + G+++ ++ + PP
Sbjct: 87 RCPFHGWLFDAKGDCLETPAEPAGSKLCTKIKQKAYPVVQRAGIIFAYLGEGEPP---AF 143
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
P F+ F P + + LE +DPAH H
Sbjct: 144 PEFDCFVAPDSHVFAFKGLFECNWLQALEVGIDPAHASYLH 184
>gi|121608344|ref|YP_996151.1| vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
gi|121552984|gb|ABM57133.1| Vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
Length = 352
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 143 LGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 202
L TV DQ IVLY+ G D C HRL LS G ++D + C YHG +F+ EG+C
Sbjct: 26 LARTVCDQDIVLYRKQNGAAVALADACWHRLLPLSLGTIVDDDVRCGYHGLRFDSEGRCT 85
Query: 203 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 262
+P+ I SACVR + + E VW+W +P +P P +
Sbjct: 86 ---HMPSQETINPSACVRAFPIVERHRFVWIWPGDPALADPTLVPDLRWMNDPAWTGDGR 142
Query: 263 IHELPYDHSILLENLMDPAHIPISH 287
+ E+ D+ ++++NLMD H H
Sbjct: 143 MTEVKADYRLVIDNLMDLTHETYVH 167
>gi|238767602|dbj|BAH66640.1| chlorophyllide a oxygenase [Nephroselmis pyriformis]
Length = 305
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 30/296 (10%)
Query: 160 GELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACV 219
G C +D C HR LS G + G+ C YHGW+F G+G C +IP + + S +
Sbjct: 4 GTAACVKDECAHRACPLSLGTVEGGKATCAYHGWKFGGDGACTEIPSVGSRGAAGIS--I 61
Query: 220 RTYEVKESQGVVWVWMSQKTPPN--PDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 277
R+ V+E G+VWVW P P L E F + ++P +H +LLENL
Sbjct: 62 RSLPVQEVDGLVWVWPGSAEPAAEIPRDLRVPEGFT----LHAEIVLDVPVEHGLLLENL 117
Query: 278 MDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPC- 336
+D AH P +H T + A P + + R G W P + FE PC
Sbjct: 118 LDLAHAPFTHTST---FAKGWAVPDLVKFSTDKMRTLGGAW-----DPYPIDMSFEPPCH 169
Query: 337 ------VLQNNRESVDNKTGE-KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPD 389
+ + + + GE + + L +C P+ +G++ L+ R + PW+K P
Sbjct: 170 VLSLIGLEKPGEVASGTRAGECERHLHQLHVCLPSREGQTRLLYRM-SLDFLPWVKHVPG 228
Query: 390 --WYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMD 443
+ A++V +D+ ++ Q + ++ E +++ N D +YR W +
Sbjct: 229 IKMVWEAMAAQVLGEDLRLVAGQQDRMVNEGA---QIWGNPMGYDELGVKYRMWRN 281
>gi|347529881|ref|YP_004836629.1| phthalate 4,5-dioxygenase [Sphingobium sp. SYK-6]
gi|345138563|dbj|BAK68172.1| phthalate 4,5-dioxygenase [Sphingobium sp. SYK-6]
Length = 439
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 128 WYPLYLTKDVP-DDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
W P+ L ++P PL + + + +VL++D G L CPHR A LS G++ DG L
Sbjct: 27 WQPVALASEIPLGGDPLPIDILSEALVLFRDEDGRLGLLGRHCPHRGADLSYGRVEDGGL 86
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
CLYHGW F+ GKC++ P P + C ++Y V E G V+ +M PP
Sbjct: 87 RCLYHGWLFDVGGKCLEQPAEPKGSTFKDKICQKSYPVVERGGAVFAYMGPGEPP---LF 143
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
P ++ FA P + ++ E DPAH+ H
Sbjct: 144 PAYDFFAYPPEHVFARKLFKECNYLQANEGNYDPAHVGFLH 184
>gi|229086002|ref|ZP_04218224.1| hypothetical protein bcere0022_26020 [Bacillus cereus Rock3-44]
gi|228697313|gb|EEL50076.1| hypothetical protein bcere0022_26020 [Bacillus cereus Rock3-44]
Length = 324
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 13/184 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +KDV D P+ + + +VL+++ ++ CPHR A LS G + GR+
Sbjct: 18 WYAVCFSKDVID-KPIKRKIVGKDLVLFRNENHNIQAVHAYCPHRGADLSLGSIRKGRVT 76
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+G G CV IP P+ +IP+ A ++Y V E G++WV+ + + ++LP
Sbjct: 77 CAYHGWEFDGGGTCVCIPSQPS-KQIPKFAHTKSYPVMEKAGLIWVY--PECEISKEELP 133
Query: 248 WFENFARPGFQDVSTIHELPYD------HSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
E F +D++ + PY + ++E+++D H+ H T + +
Sbjct: 134 ILEIFEE--VEDINFVFS-PYQAKWNAHFTRVVESVLDVVHLSFVHKNTIGKGSNPELEE 190
Query: 302 LGFE 305
L E
Sbjct: 191 LQIE 194
>gi|300313279|ref|YP_003777371.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum seropedicae SmR1]
gi|300076064|gb|ADJ65463.1| vanillate O-demethylase oxygenase subunit oxidoreductase protein
[Herbaspirillum seropedicae SmR1]
Length = 349
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + ++IV Y+ G++ +D CPHR A LS G + +G+L
Sbjct: 7 WY-VACTPDEIDSKPLGRQICGEKIVFYRGAGGKVAAVEDFCPHRGAPLSLGFVREGQLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GK + +P ++ C+R+Y V+E G +WVW K +P ++
Sbjct: 66 CGYHGLEMGCDGKAISMP----GQRVRGFPCIRSYPVEERYGFIWVWPGDKEQADPAQIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
E P + ++ + D+ ++++NLMD H H + K D P+ V
Sbjct: 122 HLEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVH-ASSIGQKEIDEAPVNTRV 179
>gi|15219408|ref|NP_175088.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|75264959|sp|Q9MBA1.1|CAO_ARATH RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Short=AtCAO; Flags: Precursor
gi|13876511|gb|AAK43487.1|AC084807_12 chlorophyll a oxygenase [Arabidopsis thaliana]
gi|6855279|dbj|BAA90462.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|22135956|gb|AAM91560.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|25083487|gb|AAN72086.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|110737210|dbj|BAF00553.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|332193913|gb|AEE32034.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 536
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 150/340 (44%), Gaps = 42/340 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ T D+ D + + F+Q V+++ G+ C ++ C HR L G + +GR++
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +G+C K+P KI C+ E +G++W+W + P
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCL------EQEGMIWIWPGDEPPA----- 329
Query: 247 PWFENFARP-GFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
P + P GF + +LP +H +LL+NL+D AH P +H T AK L
Sbjct: 330 PILPSLQPPSGFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVK 387
Query: 305 EVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYST 356
+T + G G W P + F+ PC++ + E + H
Sbjct: 388 FLTPTS--GLQGYW-----DPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQ 440
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVL 414
L +C P+ + K+ L+ R + +P +K P + + A +V +D+ + Q E +
Sbjct: 441 -LHVCLPSSKNKTRLLYRM-SLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERM 498
Query: 415 LKEKVPTKELYFNLRSIDTWVAEYRKW---MDKAGHGMPY 451
L ++ + D YR W +D+ +P+
Sbjct: 499 LN----GANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|5853117|gb|AAD54323.1| chlorophyll a oxygenase [Arabidopsis thaliana]
Length = 536
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 40/339 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ T D+ D + + F+Q V+++ G+ C ++ C HR L G + +GR++
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +G+C K+P KI C+ E +G++W+W + PP P L
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCL------EQEGMIWIWPGDE-PPAP-IL 332
Query: 247 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + + GF + +LP +H +LL+NL+D AH P +H T AK L
Sbjct: 333 PSLQPPS--GFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKF 388
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYSTG 357
+T + G G W P + F+ PC++ + E + H
Sbjct: 389 LTPTS--GLQGYW-----DPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQ- 440
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVLL 415
L +C P+ + K+ L+ R + +P +K P + + A +V +D+ + Q E +L
Sbjct: 441 LHVCLPSSKNKTRLLYRM-SLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERML 499
Query: 416 KEKVPTKELYFNLRSIDTWVAEYRKW---MDKAGHGMPY 451
++ + D YR W +D+ +P+
Sbjct: 500 N----GANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|110680835|ref|YP_683842.1| vanillate O-demethylase oxygenase [Roseobacter denitrificans OCh
114]
gi|109456951|gb|ABG33156.1| vanillate O-demethylase oxygenase, putative [Roseobacter
denitrificans OCh 114]
Length = 346
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
+TV ++I +++ GEL +D CPHR LS+G++ +EC YHG F G+CV
Sbjct: 23 ITVLGEKICVFRSESGELVGLEDACPHRKLPLSKGRIKGDTVECGYHGLTFNCVGQCV-- 80
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 263
P IP +A V Y + E G+VW+WM +P + EN+ P + +
Sbjct: 81 -WAPGSGGIPSNAKVHAYPLHEKYGLVWIWMGNPALADPADIFEIENYDNPAWGINRGAA 139
Query: 264 HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKD 323
EL ++ ++ +NL+DP H+ H ++ ++A PL +T+ D +W + +
Sbjct: 140 MELDCNYLLMCDNLLDPTHVAWVH-QSSFAADATKDTPL--RITKTDDGVIVHRWMMDHE 196
Query: 324 GS--MPNFLRFEAPC 336
+ + FE C
Sbjct: 197 PAPFYKKVVEFEGNC 211
>gi|425746977|ref|ZP_18864997.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-323]
gi|425484404|gb|EKU50808.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-323]
Length = 355
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 14/219 (6%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGNR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + D + ++CV++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRHDGVVEDVPAV-HDCPMKGTSCVKSYPVIEQHGAIFMWFGIDANEEPKP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDYSAKR 296
L + E A + + +H ++N+MDP H H DRT + +
Sbjct: 139 LDFPEQLASQEWSSFLCQADWKVNHQYAIDNVMDPMHGSYLHCTSHSMAEGDRT--AEMK 196
Query: 297 EDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAP 335
+ P GF + G W E + ++LR P
Sbjct: 197 HRSTPNGFIFEKEGQVGVNFDW-VEYANTGASWLRLSIP 234
>gi|239820953|ref|YP_002948138.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
gi|239805806|gb|ACS22872.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 341
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 87/171 (50%), Gaps = 19/171 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ DDA TV D+ I++Y+ GEL QDRC HR A LS G+ +
Sbjct: 7 WYVIAWDHEISDDALFTRTVLDEPILVYRTEGGELVAMQDRCCHRHAPLSRGRREGDCVR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F +G CV+ P L A IP A VRTY V ++VWM + + LP
Sbjct: 67 CGYHGLKFAADGVCVEAPGL---ASIPVKARVRTYPVVSHNKWIFVWMGDPSLADRALLP 123
Query: 248 WFENFA--------RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+NF+ RPG+ T PY ++ +NL+D +H+ H+ T
Sbjct: 124 --DNFSCDHPDWRYRPGYVHYDT----PY--LLVCDNLLDFSHLSYVHEGT 166
>gi|398811407|ref|ZP_10570207.1| ring-hydroxylating dioxygenase, large terminal subunit [Variovorax
sp. CF313]
gi|398080780|gb|EJL71578.1| ring-hydroxylating dioxygenase, large terminal subunit [Variovorax
sp. CF313]
Length = 351
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 134/334 (40%), Gaps = 60/334 (17%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T + DD PLG + +++VLY+ +G+ +D CPHR A LS G +++G+L
Sbjct: 7 WY-VACTANEIDDKPLGRMICGEKLVLYRAAEGKAAALEDFCPHRGAPLSLGSVVEGKLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GK V +P ++ +R++ V E G VWVW +P KL
Sbjct: 66 CGYHGLEMGCDGKTVAMP----GQRVRGFPAIRSFPVIERYGFVWVWPGDPALSDPAKLH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
E P + + + D+ ++++NLMD H H T K D P T
Sbjct: 122 HLEWAESPDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVH-ATSIGQKEIDETP-----T 175
Query: 308 ERTDRGFAGQWGREKDGSM-PNFLRFEAPCVLQNNRESVDN------------------K 348
+ G R + M P F R L+ N + D +
Sbjct: 176 KTVTEGDTVTTARHMENIMAPPFWRM----ALRGNHLADDVPVDRWQICRFTPPSHVLIE 231
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYF---------------- 392
G H G + P + S ++V F T T I WYF
Sbjct: 232 VGVAHAGKGGYHADPAHKVSS-IVVDFITPETETSI-----WYFWGMARNFQPHDKALTA 285
Query: 393 --HQSASKVFEQDMGFLSSQNEVLLKEKVPTKEL 424
+ K+F +D+ L SQ LL P ++L
Sbjct: 286 SIREGQGKIFSEDLEMLESQQRNLLAH--PQRQL 317
>gi|427737913|ref|YP_007057457.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427372954|gb|AFY56910.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 325
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 8/167 (4%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+W+ + ++++ + L + + Q ++L+++GK E +DRCPHR A LS+G + L
Sbjct: 9 DWHVVASSENLVEGKILKVRLLGQDVLLWRNGK-EALAWEDRCPHRGASLSKGWIEKDNL 67
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRS-ACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YHG F GEGKC IP P RS ACV+TY ++E G+VWV + P D
Sbjct: 68 VCSYHGLAFNGEGKCSHIPAHPEQIPSKRSKACVKTYHLQERYGMVWVCLG---IPQQD- 123
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSI--LLENLMDPAHIPISHDRT 290
+P+ + P F + + + S LEN +D H+P H+ T
Sbjct: 124 VPFLAEWDNPEFYNKIFFDGVLHRSSAPRTLENFIDMNHVPFIHNGT 170
>gi|218439920|ref|YP_002378249.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218172648|gb|ACK71381.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 367
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + + L + V+ Q I +Y+D +L ++ CPH+ +G++ + L
Sbjct: 36 WYPVAWSHQLKPCQILPVVVWQQAIAVYRDVNHQLHALENACPHKGVVFDKGEVFETHLV 95
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F GEG+CVKIP LP + K+P A R Y ++E G++W++ + +P
Sbjct: 96 CPYHGWEFNGEGECVKIPYLPPEQKLP-CAKARNYPIQEKYGIIWIFPGDPSLAELKTIP 154
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
+ + V SI EN MD H
Sbjct: 155 DVPEYNESEWLIVEIPAHFQAHFSICNENTMDVFH 189
>gi|148557174|ref|YP_001264756.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502364|gb|ABQ70618.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 362
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 141 APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 200
APL + + +VLY+ GE+ DRCPHR LS+G LI RL C YHG++F +G+
Sbjct: 37 APLSRQILGRSVVLYRTEAGEVAALPDRCPHRFMPLSQGWLIGDRLRCAYHGFEFGPDGR 96
Query: 201 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV 260
C I P+ +P + +R Y V E VW+W +P LP +++RPG+
Sbjct: 97 CAHI---PSQGVVPGTMRIRPYPVVEHGLWVWIWPGDPELADPALLP--PDYSRPGYDSF 151
Query: 261 STIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWG 319
H + L ENL+D H H+ + ++ P E ER R
Sbjct: 152 VHFQASVKCHFLKLQENLLDSTHPTFLHEGMFDDGELANS-PQKVEADERFIR-----LT 205
Query: 320 REKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRF 375
RE +PN + ++ + ++ R + +C ++++I RF
Sbjct: 206 RETQPQLPNEMTAQSFSLPRDQR------------AVRAVICEGHAPSRNVVITRF 249
>gi|167645102|ref|YP_001682765.1| vanillate monooxygenase [Caulobacter sp. K31]
gi|167347532|gb|ABZ70267.1| Vanillate monooxygenase [Caulobacter sp. K31]
Length = 350
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 132/331 (39%), Gaps = 55/331 (16%)
Query: 146 TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 205
T+ +++IVL++ G+ C +D C HRL LS G+L ++C YHG F G+CV+
Sbjct: 29 TICNKKIVLFRKENGQAVCLEDACWHRLLPLSMGRLKGDDVQCGYHGLVFNEHGRCVR-- 86
Query: 206 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE 265
+P+ I SACVR++ + E VW+W +P +P P + +
Sbjct: 87 -MPSQETINPSACVRSFPLVERHRFVWIWPGDPALADPALVPDLHWNHDPAWAGDGKVIH 145
Query: 266 LPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQW------- 318
D+ ++++NLMD H H S + FEVT +W
Sbjct: 146 AKCDYRLIVDNLMDLTHETYIHGS---SIGNDAVAEAPFEVTTGDKTAMVTRWMIDIEPP 202
Query: 319 -------GREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTG---QGK 368
G+ + +RFEAPC + + TG P G QG
Sbjct: 203 PFWRQQLGKPGNVDRWQIIRFEAPCTVAIDVGVAPTGTGA-----------PRGDRSQGV 251
Query: 369 SMLIVRFGTTGTSPWIKLFPDW---------------YFHQSASKVFEQDMGFLSSQNEV 413
SM+++ T T F W ++ +KVF +D + +Q
Sbjct: 252 SMVVINTITPATDKTCHYF--WANVRDYQLGEQKVTTQIREAITKVFAEDEVIVEAQQRA 309
Query: 414 LLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+ +++NL +ID R+ +D+
Sbjct: 310 IDDHP---DHVFYNL-NIDAGAMWARRLIDR 336
>gi|385677908|ref|ZP_10051836.1| iron-sulfur protein [Amycolatopsis sp. ATCC 39116]
Length = 347
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+ WYPL + V + + Q++L++DG G + +DRCPHR A+LS+G + R
Sbjct: 17 DRWYPLCPSGHVRPGELVRIERAGAQLLLWRDGAGVVHVQEDRCPHRAARLSQGVHMGDR 76
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW--MSQKTPPNP 243
+ C YHG Q + EG V +P P A R +RT+ +E G V+ W + + PP P
Sbjct: 77 VACNYHGVQVDAEGTVVSVPGSPGCALEGRR-VLRTFPAEEHAGAVFAWFGLDESAPPAP 135
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH--DRTDYSAKRE---- 297
++P E A + + E + L+NL+DP H H T ++ KRE
Sbjct: 136 LEVP--EPIAGGEWSEFLCYVEWDAPYLYSLDNLLDPMHGAFLHRNSHTMFAGKREAVFQ 193
Query: 298 -DAQPLGFEVTERTD-RGFAGQW 318
A GF V E+TD RG W
Sbjct: 194 IRATDNGF-VFEKTDQRGVNFDW 215
>gi|339018559|ref|ZP_08644691.1| vanillate O-demethylase oxygenase subunit [Acetobacter tropicalis
NBRC 101654]
gi|338752313|dbj|GAA07995.1| vanillate O-demethylase oxygenase subunit [Acetobacter tropicalis
NBRC 101654]
Length = 366
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ L +++ +D PLG+T+ D +VLY+ G+ E+ D CPHR LS G+ +
Sbjct: 48 WYPVALVREL-EDKPLGVTLLDAPLVLYRSGE-EIVVADDLCPHRGVPLSMGRGDGQSIA 105
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM-------SQKTP 240
C YHG++F G+CVK+P P D IP+ +RTY V E G++W + S +
Sbjct: 106 CAYHGFRFGSAGRCVKVPAHP-DNAIPKRLTLRTYPVMERYGLIWTCLRPQEGEASLPSM 164
Query: 241 PNPDKL-------PWFE--NFARPGFQDVSTIHELPYDHSILL---ENLMDPAHIPISHD 288
P+ D L PW + FA + + + H+ EN + PA++P
Sbjct: 165 PHWDDLEFQQINCPWIDINGFAGRQVEGFIDVAHFAFVHTATFADPENPVVPAYMP---- 220
Query: 289 RTDYSAKREDAQPLGFEVTERTDRG 313
P GFE R+ G
Sbjct: 221 ---------KITPYGFEAEYRSSVG 236
>gi|397698374|ref|YP_006536257.1| rieske 2Fe-2S family protein [Pseudomonas putida DOT-T1E]
gi|397335104|gb|AFO51463.1| Rieske 2Fe-2S family protein [Pseudomonas putida DOT-T1E]
Length = 341
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGRL 186
WY L L +D P T+ + +VL+K G QDRC HR AKLS+G + +G +
Sbjct: 13 WYAL-LPMTALEDGPKPFTLLGEALVLWKRPDGTPVAMQDRCCHRTAKLSKGFVSAEGNI 71
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+++ G CVKIPQ P A IP A V+ Y +E G WV + P +
Sbjct: 72 ACGYHGWEYDCTGTCVKIPQNPTGA-IPPGAAVKAYHCQEKYGYAWVSLDDPLQP----I 126
Query: 247 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P F PG++ + +E + ++EN D +H H + ++ + QP +
Sbjct: 127 PEFPEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVH-KANFGLF-DQPQPASYA 184
Query: 306 VTERTDRGFAGQ 317
E TD GF +
Sbjct: 185 FRE-TDYGFEAE 195
>gi|2271506|gb|AAC27113.1| unknown [Acinetobacter sp. ADP1]
Length = 316
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++WYP+ + +V + P+G+T + IV+++D G+L +DRCPHR A+LS G + R
Sbjct: 24 DQWYPVLASWEVSAN-PVGITRLGENIVVWRDEAGQLYALEDRCPHRGARLSLGWNLGDR 82
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPR--SACVRTYEVKESQGVVWVWMSQKTPPNP 243
+ C YHG G+ V + +PA + P +ACV++Y + E +++W P
Sbjct: 83 VACWYHG--VRSGGRMVLVADVPAVHECPLKGAACVKSYPIIEKHDAIFIWFGIDANEPP 140
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
+L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 141 AELVFPEQLASEAWSSCLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMK 200
Query: 304 FEVTE 308
TE
Sbjct: 201 HRSTE 205
>gi|152995325|ref|YP_001340160.1| Rieske (2Fe-2S) domain-containing protein [Marinomonas sp. MWYL1]
gi|150836249|gb|ABR70225.1| Rieske (2Fe-2S) domain protein [Marinomonas sp. MWYL1]
Length = 367
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 5/179 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++++V PLG + + I Y+ E+ D CPHR A LS G + DG L
Sbjct: 11 WYVAAMSEEVAGSKPLGRKICGESIAFYRSHDNEIAAVLDFCPHRGAALSLGYVEDGLLV 70
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GK ++P ++ C+++Y V+E G +WVW ++ + D +P
Sbjct: 71 CGYHGLKMGADGKTKEMPL----QRVKGFPCMKSYAVEERYGFIWVWPGDQSQADKDLIP 126
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
E P + ++ + D+ ++++NLMD H H + K D P+ +V
Sbjct: 127 HLEWAVNPEWAYGGGLYHINCDYRLMVDNLMDLTHETYVH-ASSIGQKEIDESPVSTKV 184
>gi|282900953|ref|ZP_06308886.1| hypothetical protein CRC_02369 [Cylindrospermopsis raciborskii
CS-505]
gi|281194044|gb|EFA69008.1| hypothetical protein CRC_02369 [Cylindrospermopsis raciborskii
CS-505]
Length = 354
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 137/329 (41%), Gaps = 40/329 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + + + I+ +D G++ +D CPHR LS G+ ++E
Sbjct: 13 WYYALPSSQLKTGKMVSRVLLKEPILFTRDKNGQVFAIEDICPHRAVPLSCGRFDGEQVE 72
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW+F +GKC +IP L + I S V++Y V E+QG +W++M K P P
Sbjct: 73 CCYHGWRFNSQGKCTEIPSLLPEQSIDLSRFNVKSYPVYETQGNIWIYMYDKEGP-PINA 131
Query: 247 PWFENFARPGFQ----DVSTIHELP--YDHSILLENLMDPAHIPISHD-------RTDYS 293
+ PGF D+ + + P DH++ LMDPAH P H +
Sbjct: 132 EIGDIPQVPGFSNREPDLVEVMKFPCFIDHAV--TGLMDPAHSPYVHQVWWWRSGKLHEE 189
Query: 294 AKREDAQPLGFEV-----TERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNNRESVDN 347
K+ D GF V ++ T+ W G +P + F P V ++
Sbjct: 190 VKQFDPSDYGFTVRRHKLSDNTENMSRLYW--LVGGGIPEVEISFRLPGV------RIEE 241
Query: 348 KTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDW-------YFHQSASKVF 400
T KH L P ++ V F G W+K+F + Q + V
Sbjct: 242 ITFGKHRVCNLTAVTPISDTETE--VNFVLYGIPNWLKIFTPLIQILTRRFLDQDRNVVE 299
Query: 401 EQDMGFLSSQNEVLLKEKVPTKELYFNLR 429
+Q +G + L+K+ + YF L+
Sbjct: 300 KQQIGLQYNPVLRLIKDSDMQAQWYFQLK 328
>gi|254418839|ref|ZP_05032563.1| Rieske (2Fe-2S) domain protein [Brevundimonas sp. BAL3]
gi|196185016|gb|EDX79992.1| Rieske (2Fe-2S) domain protein [Brevundimonas sp. BAL3]
Length = 376
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 18/178 (10%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFD---QQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
+ WY + L++DV AP GL ++ + +++ + G + +D CPHR A LS G+L
Sbjct: 32 ADAWYFVALSRDV---APAGLKRYEIMGEPVLIGRTRAGAVYAMRDICPHRAAPLSAGKL 88
Query: 182 IDG-----RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWM 235
++ +EC YHGW+F +G C IP L D + VR + V+ESQG+V+VWM
Sbjct: 89 VEKPGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRAFPVRESQGMVFVWM 148
Query: 236 SQ--KTPPNPD-KLPWFENFARPGFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDR 289
+ + P PD + P F G + V + + DH+++ LMDPAH P H +
Sbjct: 149 ASDARNPMEPDHEPPVFPGVVGSGPKLVEAMEFDSHIDHAVV--GLMDPAHGPYVHQQ 204
>gi|91780663|ref|YP_555870.1| putative Rieske (2Fe-2S) protein [Burkholderia xenovorans LB400]
gi|91693323|gb|ABE36520.1| Putative Rieske (2Fe-2S) protein [Burkholderia xenovorans LB400]
Length = 314
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
T W+ L + V PL + + +VL++D G +DRCPHR L+ G++
Sbjct: 3 TGSWWAAALAESVDASRPLAVVCNGEALVLFRDASGAACALEDRCPHRRVPLALGKVTPK 62
Query: 185 RLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
L+C YHGW F+G+ G C IP L AD ++P R+Y V E+ G + VW+ P +
Sbjct: 63 GLQCGYHGWTFDGKTGACTAIPNLSADERVPPRYGARSYRVAEASGFIHVWLGDGEPDDA 122
Query: 244 DKLP 247
+LP
Sbjct: 123 -RLP 125
>gi|414164011|ref|ZP_11420258.1| hypothetical protein HMPREF9697_02159 [Afipia felis ATCC 53690]
gi|410881791|gb|EKS29631.1| hypothetical protein HMPREF9697_02159 [Afipia felis ATCC 53690]
Length = 382
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 5/217 (2%)
Query: 117 RRVADYDWTEE-WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAK 175
R +A Y E WY + D P + G V + IV ++ G++ + DRC H+
Sbjct: 7 RALATYACVENCWYMIGTAADFPAEKLTGHVVAKKPIVAWRTKHGQVVAYDDRCAHKRFP 66
Query: 176 LSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW 234
LS+G+L+ DG LEC YHG +++ GKCV IP P P+ A VR Y + E G++W+W
Sbjct: 67 LSKGRLMQDGTLECAYHGLRYDMTGKCVMIPSHPTGPISPQ-AIVRPYPIVEQDGLIWLW 125
Query: 235 MSQKTPPNPDKLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYS 293
K P ++ ++ E+P ++ +L+ENL+D H HD +
Sbjct: 126 PGNPALSGTRKPPRLPEVGSEDWKTEIIGPMEIPANYLLLIENLLDITHFYPLHD-GNIG 184
Query: 294 AKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFL 330
P+ E E +A + D P +L
Sbjct: 185 DIENSRIPVDLEEGEEDGNRYAMTIRKVTDYKQPPYL 221
>gi|319782309|ref|YP_004141785.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168197|gb|ADV11735.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 346
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 12/228 (5%)
Query: 147 VFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 206
+ + IVLY+ G + +D CPHR LS G++ +EC YHG F+ G C ++
Sbjct: 25 ILGEDIVLYRRTDGVVAALEDACPHRKLPLSMGRIKGDTVECGYHGLTFDSTGTCTRV-- 82
Query: 207 LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTIHE 265
P KIP ACVR+Y + E G++W+WM + +P + +++ P + +
Sbjct: 83 -PGAEKIPHVACVRSYPIAERYGLLWIWMGEAAKADPALIFAVDHWGDPAWGVNRGESMA 141
Query: 266 LPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGS 325
L ++ + +NL+DP+H+ H + + + PL E T D +W + +
Sbjct: 142 LDCNYLYMTDNLLDPSHVSWVHQSSFGGVQAMEDAPL--ETTVGADGVTVWRWVVDAAPA 199
Query: 326 --MPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFL-CRPTGQGKSM 370
FL+F C + ++ + + +F+ R G+GK +
Sbjct: 200 PFYAPFLKFSGNC---DRKQHYEVRYPSNAIIKAIFVPARTGGEGKPL 244
>gi|387887922|ref|YP_006318220.1| putative rieske (2Fe-2S) domain protein [Escherichia blattae DSM
4481]
gi|414594872|ref|ZP_11444505.1| putative iron-sulfur protein [Escherichia blattae NBRC 105725]
gi|386922755|gb|AFJ45709.1| putative rieske (2Fe-2S) domain protein [Escherichia blattae DSM
4481]
gi|403194177|dbj|GAB82157.1| putative iron-sulfur protein [Escherichia blattae NBRC 105725]
Length = 340
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V AP+G+T +QIVL+++ G ++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVLWRNQDGTVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G+G+ +P + + CVR Y V+E+ G +++W P+ L
Sbjct: 76 CWYHGVEVAGDGEVKDVPAVDR-CPLVGQKCVRRYHVQEAHGALFLWFGVTDDQAPEPLI 134
Query: 248 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ E + + ++ LEN+MDP H H + A+ + + E
Sbjct: 135 FPEELSDSESYSHFLCTAAWKCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 194
Query: 307 TERTDRGF 314
TD+GF
Sbjct: 195 ---TDKGF 199
>gi|423207584|ref|ZP_17194140.1| hypothetical protein HMPREF1168_03775 [Aeromonas veronii AMC34]
gi|404620651|gb|EKB17548.1| hypothetical protein HMPREF1168_03775 [Aeromonas veronii AMC34]
Length = 344
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 11/196 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V + P+G+T + IVL++D KG + +DRCPHR A+LS G + R+
Sbjct: 19 WYPVVSSWEVSSN-PVGITRLGEHIVLWRDTKGNVNALEDRCPHRGARLSLGWNLGDRVA 77
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G G +P + A + S C+R+Y V E G +++W + P +L
Sbjct: 78 CWYHGVEVNGAGVVTDVPAVDA-CPMTGSKCLRSYPVIEKHGAIFLWFGLEAESTPAELV 136
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDYSAKRED 298
E + + ++ ++N+MDP H H D++ R
Sbjct: 137 LPEQLESEEWSHFLCQADWAVNYRYAVDNVMDPMHGSYLHCTSHSMAEGDKSADMRARNT 196
Query: 299 AQPLGFEVTERTDRGF 314
Q FE T ++ F
Sbjct: 197 EQGFIFEKTGQSGVNF 212
>gi|307546530|ref|YP_003899009.1| vanillate monooxygenase [Halomonas elongata DSM 2581]
gi|307218554|emb|CBV43824.1| vanillate monooxygenase [Halomonas elongata DSM 2581]
Length = 383
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D +D PLG T+ ++ IV ++ +G + +D CPHR A LS G + DG+L
Sbjct: 40 WY-VACTPDELEDKPLGRTICNEPIVFFRGDEGRVAAVEDFCPHRGAPLSLGFVRDGKLV 98
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + GKC +P ++ +R Y V+E G VW+W +P +P
Sbjct: 99 CGYHGLEMGCNGKCSSMP----GQRVRGFPSIRAYPVEERHGFVWIWPGDPDKADPALIP 154
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
P + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 155 ELHWANDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQPEIEEAAP 208
>gi|257056591|ref|YP_003134423.1| vanillate demethylase subunit A [Saccharomonospora viridis DSM
43017]
gi|256586463|gb|ACU97596.1| vanillate demethylase subunit A [Saccharomonospora viridis DSM
43017]
Length = 377
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 134/341 (39%), Gaps = 49/341 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V D PL TV + L+++ +G D C HRLA LS+G++I L+
Sbjct: 29 WYVAAWDYEVTDKKPLARTVAGVPLALWRNTEGRAVALADACWHRLAPLSKGKIIGDELQ 88
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F G+C +PA + SA V +Y V E VWVW+ +P+ +P
Sbjct: 89 CPYHGLRFNSAGRCTA---MPAQETLNPSALVPSYPVVERYRYVWVWVGDPNLADPNTVP 145
Query: 248 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P + D TIH ++ ++L+NLMD H H S +E+ F+V
Sbjct: 146 DMHQMDDPAWAGDGETIHA-DCNYQLVLDNLMDLTHEEFVHSS---SIGQEELSEADFDV 201
Query: 307 TERTDRGFAGQWGREKDG----------SMPNF---------LRFEAPCVLQNNRESVDN 347
+ +W D P F ++FEAP ++ +
Sbjct: 202 VHEGNTVTVTRWMLNVDAPPFWLRNMRDKFPGFEGKVDRWQIIKFEAPSTIRIDVGVAKA 261
Query: 348 KTG--EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQS 395
TG E S G+ G M + T + + F Y QS
Sbjct: 262 GTGAPEGDRSQGV-------NGYVMNTITPETDRSCHYFWAFMRNYRLDSQTITTRLRQS 314
Query: 396 ASKVFEQDMGFLSSQNEVLLKEKVPTKELY-FNLRSIDTWV 435
S VF +D L +Q + + P + Y N+ WV
Sbjct: 315 VSGVFAEDEDMLRAQQRAI--DANPDHQFYSLNIDIGGMWV 353
>gi|386864034|ref|YP_006276982.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1026b]
gi|418535107|ref|ZP_13100906.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1026a]
gi|418542753|ref|ZP_13108164.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1258a]
gi|418549280|ref|ZP_13114348.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1258b]
gi|385354727|gb|EIF60970.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1258a]
gi|385355533|gb|EIF61709.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1258b]
gi|385356798|gb|EIF62884.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1026a]
gi|385661162|gb|AFI68584.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1026b]
Length = 315
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 130 PLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRLEC 188
P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++ DGRL+C
Sbjct: 2 PVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRVTPDGRLQC 61
Query: 189 LYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 241
YHGW ++G G CV IP L A ++P Y+ E G +W PP
Sbjct: 62 AYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAPPP 115
>gi|421807677|ref|ZP_16243537.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC035]
gi|410416658|gb|EKP68430.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC035]
Length = 355
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAA 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 306 VTE 308
TE
Sbjct: 199 TTE 201
>gi|339502337|ref|YP_004689757.1| vanillate O-demethylase oxygenase [Roseobacter litoralis Och 149]
gi|338756330|gb|AEI92794.1| vanillate O-demethylase oxygenase-like protein [Roseobacter
litoralis Och 149]
Length = 346
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
+TV ++I +++ GEL +D CPHR LS+G++ +EC YHG F G+CV
Sbjct: 23 ITVLGEKICVFRSEAGELVGLEDACPHRKLPLSKGRIKGDTVECGYHGLTFNCVGQCV-- 80
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 263
P IP +A V Y ++E G+VW+WM +P + EN+ P + +
Sbjct: 81 -WAPGSGGIPSNAKVHAYPLQEKYGLVWIWMGNPALADPADIFEIENYDNPAWGINRGAA 139
Query: 264 HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRG 313
EL ++ ++ +NL+DP H+ H + +A +D PL +TD G
Sbjct: 140 MELDCNYLLMCDNLLDPTHVAWVHQSSFAAAATKDT-PLRI---TKTDEG 185
>gi|421852528|ref|ZP_16285215.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479205|dbj|GAB30418.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 338
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ L +++ +D PLG+T+ D +V+Y+ G+ E+ D CPHR LS G+ +
Sbjct: 19 WHPIALVREL-EDKPLGVTLLDAPLVIYRAGE-EIVVADDLCPHRGVPLSMGKGNGQTVA 76
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 246
C YHG+QF +G+CV+IP P D+ IP +RTY V E G++W + + N D +
Sbjct: 77 CAYHGFQFGHQGQCVRIPAHP-DSAIPSRLNLRTYPVVERYGLIWTCLRPQD--NEDISI 133
Query: 247 PWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISH-------DRTDYSAKRED 298
P ++ GFQ ++ ++ +E +D AH H D A
Sbjct: 134 PSMPHWDEAGFQQINCPWIDIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPVVPAYMPK 193
Query: 299 AQPLGFEVTERTDRG 313
P GFE R++ G
Sbjct: 194 MTPYGFEAEYRSNVG 208
>gi|308205532|gb|ADO19015.1| rieske (2Fe-2S) domain protein [Nostoc flagelliforme str.
Sunitezuoqi]
Length = 336
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + V D P + + QQ VLY++ + ++ D+CPHR A LS G L + +
Sbjct: 13 WYACEFS-SVITDKPKRVPLLSQQFVLYRNSQKQIVAFLDQCPHRGAALSNGWLENDCIR 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM----SQKTPPNP 243
C YHGW+++ +G C++IP I + A + TY V+E G VW++ ++ PP
Sbjct: 72 CPYHGWKYQADGTCIEIPANQPGVPISKKARLITYPVQEKYGFVWLFWGDLPQRECPP-- 129
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
LP F P + V + ++ L+EN +DPAH H
Sbjct: 130 --LPSFPEVKDPSLRSVEFEFKWNAHYTRLVENSIDPAHSAFVH 171
>gi|254422717|ref|ZP_05036435.1| Rieske (2Fe-2S) domain protein [Synechococcus sp. PCC 7335]
gi|196190206|gb|EDX85170.1| Rieske (2Fe-2S) domain protein [Synechococcus sp. PCC 7335]
Length = 363
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 23/174 (13%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYK---DGKGELRCHQDRCPHRLAKLSEGQLIDG 184
WYP+ +KDV + P+G T+ DQ++V+++ +L D C HR LS G + +
Sbjct: 42 WYPIAFSKDVTTE-PVGTTLLDQRLVIWRPPASSGSQLCVANDICIHRGVPLSMGHIENE 100
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS--QKTPPN 242
+L C YHG+ + G+C KIP P +AKIP C++TY VKE+ G+VW +S + TP
Sbjct: 101 QLICKYHGFHYSASGQCTKIPANP-EAKIPARLCLKTYPVKEAYGLVWTTLSGDENTP-- 157
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSI------LLENLMDPAHIPISHDRT 290
LP F + +Q + LP + +E +D AH H +
Sbjct: 158 ---LPAFPEWENDDYQPI-----LPNSVDVSAAAGRQMEGFLDVAHFAWVHSES 203
>gi|440696445|ref|ZP_20878913.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
gi|440281329|gb|ELP68959.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
Length = 354
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+WY + +V + LG T+ + +V Y+ + +G DRC HR LSE L R
Sbjct: 11 QWYVAAYSHEVGREL-LGRTILGEPLVFYRTEDEGTPVALADRCVHRRYPLSESGLDGDR 69
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG+ ++ G CV +P +IPR+A V +Y+V E ++WVW+ + D
Sbjct: 70 IVCGYHGFTYDTTGACVYVP---GQKRIPRTARVASYQVVEQDALIWVWIGDPALADADT 126
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ-PLGF 304
+P + PG+ V + + D+ +L++NL+D +H H Y E A+ P+
Sbjct: 127 IPRARHLDSPGWVTVKGMEPIDADYGLLVDNLLDLSHETYLH--GGYIGTPEVAETPINT 184
Query: 305 EVTE 308
EV E
Sbjct: 185 EVDE 188
>gi|262195099|ref|YP_003266308.1| Rieske (2Fe-2S) domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262078446|gb|ACY14415.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haliangium ochraceum
DSM 14365]
Length = 388
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ + P +T +++VL++D +G + RCPHR A L G++ +G +E
Sbjct: 28 WYAILESRRL-RRRPQSVTRLGRRLVLWRDRRGRVLATDARCPHRGADLGLGRVREGEIE 86
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-----------MS 236
C YHG++F+G G C +IP D IP V +Y V E G++W+W +
Sbjct: 87 CPYHGFRFDGAGACTRIPCEGGDYSIPAGMAVNSYAVTERYGLIWLWWPAGGVCADPVAA 146
Query: 237 QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ PP +PWF+ + E + E ++D H P +H
Sbjct: 147 ESLPP----VPWFDEMPASLSGTTTETMEWQTPFTRAAEGMLDIHHAPFAH 193
>gi|225012927|ref|ZP_03703345.1| Rieske (2Fe-2S) domain protein [Flavobacteria bacterium MS024-2A]
gi|225002912|gb|EEG40890.1| Rieske (2Fe-2S) domain protein [Flavobacteria bacterium MS024-2A]
Length = 333
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 12/164 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ + ++ + P G + DQ +VL++ G + +D C HR LS G + + L
Sbjct: 16 WHPVGYSYEIKKETPFGTFLLDQALVLWRTSDGTVHAMRDLCIHRGTALSLGWIKNDCLV 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YH W+++ +G CV IPQ P D +IP+ A TY +E G+VWV + P P+ +P
Sbjct: 76 CPYHAWEYDKKGACVHIPQAP-DVEIPKKAKTPTYHCQEKYGLVWVSLEAPLYPLPE-IP 133
Query: 248 WFENFARPGFQDVSTIHELPYD----HSILLENLMDPAHIPISH 287
F N D ++ P+D S LEN D H P H
Sbjct: 134 EFGN------SDWKHVNTGPFDWKSSSSRQLENFTDFGHFPWVH 171
>gi|356509409|ref|XP_003523442.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 530
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 35/298 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++ V+++ G+ C Q+ C HR L G + +GR++
Sbjct: 215 WYPVAFSTDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 274
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ +GKC K+P + KI C E++G++WVW P P
Sbjct: 275 CPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCF------ETEGMIWVWPGNDPPTATLPS 328
Query: 245 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
LP GF+ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 329 LLP------PSGFEVHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 380
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPC-VLQNNRESVDNKTGEKHYST------ 356
+T + G G W P + F PC VL S K + S
Sbjct: 381 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTSQCATHLH 433
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNE 412
L +C P+ + K+ L+ R + +P +K P + A +V +D+ + Q E
Sbjct: 434 QLHVCLPSSKQKTRLLYRM-SLDFAPVLKHIPFMQHLWRYFAEQVLNEDLRLVLGQQE 490
>gi|170736886|ref|YP_001778146.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169819074|gb|ACA93656.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia MC0-3]
Length = 373
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
E+WY +V D P G V IVL++ GE+ D+C HR +LS G++IDG
Sbjct: 29 VEQWYVASTEAEVKRDKPFGTRVLGLGIVLFRAADGEIVALVDQCVHRGTRLSAGKVIDG 88
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACV----RTYEVKESQGVVWVWMSQKTP 240
L C YHGW ++ G +IP + + + P R V G+VWV+ + P
Sbjct: 89 CLVCPYHGWHYDQHGSVTRIPSIDSASAEPTGTTYPYRQRRLPVLTRHGLVWVYRGRGDP 148
Query: 241 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ RP +Q I+ D L+EN MD H HDR
Sbjct: 149 ALKRPFDMPHHGERP-WQSYYMINTFDGDLGALVENFMDVPHTVFVHDR 196
>gi|418395193|ref|ZP_12969211.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 354a]
gi|418555062|ref|ZP_13119808.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 354e]
gi|385369262|gb|EIF74606.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 354e]
gi|385374223|gb|EIF79138.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 354a]
Length = 315
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 130 PLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI-DGRLEC 188
P+ L++ V A L + +Q +VL++D G + +DRC HR A LS G++ DGRL+C
Sbjct: 2 PVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRVTPDGRLQC 61
Query: 189 LYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 241
YHGW ++G G CV IP L A ++P Y+ E G +W PP
Sbjct: 62 AYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAPPP 115
>gi|296115924|ref|ZP_06834547.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295977496|gb|EFG84251.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 354
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 16/196 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ L +D+ PL +T+ D +V+Y+ G+G++ D CPHR LS G+ +
Sbjct: 35 WYPVALVRDL-GAQPLSMTLLDAPLVIYRAGEGDIVIADDLCPHRGVPLSMGKGDGQTVA 93
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG++F +G+CV++P P D+ IP +RTY V E G++W + + ++P
Sbjct: 94 CAYHGFRFGAQGRCVRVPAHP-DSAIPSKLNLRTYPVVERYGLIWTCLRPEG--EMPEIP 150
Query: 248 WFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDA------- 299
++ P +Q ++ ++ +E +D AH H TD A E+
Sbjct: 151 PMPHWDDPSYQQINCPWIDIAGFAGRQVEGFIDVAHFAFVH--TDTFADPENPVVPPYRT 208
Query: 300 --QPLGFEVTERTDRG 313
P GFE R++ G
Sbjct: 209 RLTPDGFEAEYRSNVG 224
>gi|398984223|ref|ZP_10690492.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
gi|399012013|ref|ZP_10714341.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398116619|gb|EJM06378.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398155922|gb|EJM44349.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
Length = 357
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++WY L++++ D PLG T+ ++ +VL++ ++ +DRC HR LS G +
Sbjct: 23 DQWYVAALSREL-KDQPLGRTLLNKPVVLFRTADNQVAALEDRCCHRALPLSNGTVEARG 81
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
L C YHG F+ GKC++I P KIP A V Y V+E ++W+W P P
Sbjct: 82 LRCGYHGLLFDDGGKCIEI---PGQDKIPSKAKVPAYPVREQDQIIWIWFGSAEHPQPTF 138
Query: 246 LPWFENFARPG---FQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P + G F ++ PY ++ +NLMD +H+ H T
Sbjct: 139 APPVYDVHSSGKYLFDGDVYHYDAPY--QLIHDNLMDLSHLGYVHLHT 184
>gi|218291425|ref|ZP_03495351.1| Rieske (2Fe-2S) domain protein [Alicyclobacillus acidocaldarius
LAA1]
gi|218238715|gb|EED05933.1| Rieske (2Fe-2S) domain protein [Alicyclobacillus acidocaldarius
LAA1]
Length = 327
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + P V + +VL++D G +R C HR A L+ G++ G L
Sbjct: 19 WYAVCFSAQLTRRRPHAARVAGRDLVLFRDASGHVRALSRYCTHRGADLALGRVEGGHLA 78
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT-PPNPDKL 246
C YHGWQF+G+G+C IP P D IP A R Y E G+ WV++ +T PP P
Sbjct: 79 CAYHGWQFQGDGRCTLIPAHP-DRPIPDFAHNRAYPACERGGIAWVYLGGETSPPEPRVF 137
Query: 247 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+ + ++DV H + ++E+++D AH+ H +T
Sbjct: 138 SELTDGSYRLVPYEDVWQAHL-----TRVVESVLDVAHLAFVHRKT 178
>gi|254249517|ref|ZP_04942837.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
gi|124876018|gb|EAY66008.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
Length = 375
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 125 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
E+WY +V D P G V IVL++ GE+ D+C HR +LS G++IDG
Sbjct: 31 VEQWYVASTEAEVKRDKPFGTRVLGLGIVLFRAADGEIVALVDQCVHRGTRLSAGKVIDG 90
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACV----RTYEVKESQGVVWVWMSQKTP 240
L C YHGW ++ G +IP + + + P R V G+VWV+ + P
Sbjct: 91 CLVCPYHGWHYDQHGSVTRIPSIDSASAEPTGTTYPYRQRRLPVLTRHGLVWVYRGRGDP 150
Query: 241 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 289
+ RP +Q I+ D L+EN MD H HDR
Sbjct: 151 ALKRPFDMPHHGERP-WQSYYMINTFDGDLGALVENFMDVPHTVFVHDR 198
>gi|385674800|ref|ZP_10048728.1| oxidoreductase subunit alpha [Amycolatopsis sp. ATCC 39116]
Length = 348
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++WY +V + L T+ + IV Y+ GE+ DRC HR LSE +L R
Sbjct: 7 DQWYVAAYGSEVGREL-LARTILGEPIVFYRTEAGEVVALADRCVHRRYPLSESRLDGDR 65
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG+ +E G CV + P ++IPR+A V +Y V E VWVW+ +
Sbjct: 66 IVCGYHGFTYEPSGSCVFV---PGQSRIPRTARVPSYPVVEQDSFVWVWIGDPARADATL 122
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
+P A P + V + L + +L++NLMD +H
Sbjct: 123 IPRAPWLADPAYTTVCGMEPLAARYDLLVDNLMDLSH 159
>gi|37521491|ref|NP_924868.1| oxygenase, Rieske iron-sulfur component [Gloeobacter violaceus PCC
7421]
gi|35212488|dbj|BAC89863.1| gll1922 [Gloeobacter violaceus PCC 7421]
Length = 346
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 14/160 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + ++ + P +T++ + I L++ G +DRCPHR KLS G++++G LE
Sbjct: 18 WYAVAQSAELKTE-PRSITLWGEAIALFRGADGVAHAVEDRCPHRQVKLSHGRVVEGSLE 76
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+G+G+C +P + +P +RTY V+E G VW++ +P +
Sbjct: 77 CAYHGWRFDGDGRCTHVPY--REGSLP-GCRLRTYPVREHDGFVWLFAG-----DPGRAH 128
Query: 248 WFENFARPGFQDVSTIHEL-----PYDHSILLENLMDPAH 282
E P + ++ I + +S L+ENLMD H
Sbjct: 129 AVEPLRLPEWDHLNYIASVAPIACAAHYSYLIENLMDMHH 168
>gi|386397519|ref|ZP_10082297.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM1253]
gi|385738145|gb|EIG58341.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM1253]
Length = 349
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 138/333 (41%), Gaps = 49/333 (14%)
Query: 141 APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 200
A L T+ + +V+Y+ G + +D C HRL LS+G+L + C YHG ++ +G+
Sbjct: 22 ALLPRTICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGR 81
Query: 201 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGF 257
C +P+ I SACVR Y V E +W+WM +P +P W + A G
Sbjct: 82 CTF---MPSQETINPSACVRAYPVVERHRYIWLWMGDPALADPALVPDLHWNHDPAWAG- 137
Query: 258 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTE--------R 309
D TIH + D+ ++L+NLMD H H S E F+VT R
Sbjct: 138 -DGKTIH-VNCDYRLVLDNLMDLTHETFVHGS---SIGNEAVAEAPFDVTHGEKTVTVTR 192
Query: 310 TDRG------FAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG--EKHYSTGLFLC 361
RG +A Q G+ +RFEAPC + + TG E S G+
Sbjct: 193 WMRGIEAPPFWAKQLGKSGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGV--- 249
Query: 362 RPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQSASKVFEQDMGFLSSQN 411
G + + T T + F Y + S +F +D L +Q
Sbjct: 250 ----NGFVLNTITPETEKTCHYFWAFVRNYQLGEQRITTEIREGVSGIFHEDELILEAQQ 305
Query: 412 EVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+ + +++NL +ID RK +DK
Sbjct: 306 RAMDENP---DCIFYNL-NIDAGAMWTRKLIDK 334
>gi|356515896|ref|XP_003526633.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 530
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 134/298 (44%), Gaps = 35/298 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ DD + + F++ V+++ G+ C Q+ C HR L G + +GR++
Sbjct: 215 WYPVAFSTDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVKEGRIQ 274
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 244
C YHGW++ +GKC K+P + KI C E +G++WVW P P
Sbjct: 275 CPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCF------EKEGMIWVWPGNDPPTATLPS 328
Query: 245 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLG 303
LP GF+ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 329 LLP------PSGFEVHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 380
Query: 304 FEVTERTDRGFAGQWGREKDGSMPNFLRFEAPC-VLQNNRESVDNKTGEKHYST------ 356
+T + G G W P + F PC VL S K + S
Sbjct: 381 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTSQCATHLH 433
Query: 357 GLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNE 412
L +C P+ + K+ L+ R + +P +K P + A +V +D+ + Q E
Sbjct: 434 QLHVCLPSSKQKTRLLYRM-SLDFAPVLKHIPFMQHLWRYFAEQVLNEDLRLVLGQQE 490
>gi|340786276|ref|YP_004751741.1| Rieske (2Fe-2S) domain-containing protein [Collimonas fungivorans
Ter331]
gi|340551543|gb|AEK60918.1| Rieske (2Fe-2S) domain protein [Collimonas fungivorans Ter331]
Length = 344
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ ++ + P T+ +++IV+Y+ ++ +DRC HR LS G+LI L+
Sbjct: 7 WYAAALSGEIKSE-PFARTILNEKIVMYRTSANQVVALEDRCAHRQVPLSRGRLIGDELQ 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +++ G+CV I P+ + IP+ A VR++ E G VW+W + +P
Sbjct: 66 CWYHGLRYDCSGECVNI---PSQSTIPKGARVRSFPAVEKHGFVWLWPGDPDQADESAIP 122
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+ P + + ++ ++N++D +H H +T
Sbjct: 123 NHWVCSAPELAGTMSYCTIACNYVFGIDNILDISHAAFVHAKT 165
>gi|399021513|ref|ZP_10723611.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398091419|gb|EJL81863.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 345
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY +++ D PL T+ ++ +VL++ G++ +DRC HR LS G L DG +
Sbjct: 6 QWYVAGFVREL-QDKPLARTLLNRPVVLFRTESGQVAALEDRCCHRSVPLSCGSLEDGGI 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ---KTPPNP 243
C YHG + G+C++I P KIP ACV+ Y V ++W+W+ + P
Sbjct: 65 RCGYHGLLYAPSGQCIEI---PGQVKIPGKACVKAYTVAVRNDIIWLWLGEGIDSADSRP 121
Query: 244 D-KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
D + P P ++ + + ++ +NL+D +H+ H RT
Sbjct: 122 DGQPPEIAAHDNPRYKYKGGVFHYDAPYQLIHDNLLDLSHVGYVHART 169
>gi|357394269|ref|YP_004909110.1| putative vanillate O-demethylase oxygenase subunit [Kitasatospora
setae KM-6054]
gi|311900746|dbj|BAJ33154.1| putative vanillate O-demethylase oxygenase subunit [Kitasatospora
setae KM-6054]
Length = 342
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQLIDGR 185
+WY +V DD LG TV + +VLY+ + G DRC HR LSE +
Sbjct: 8 QWYVAAYAAEVGDDL-LGRTVLGEPVVLYRSAEDGRAIALADRCVHRRFPLSESRREGDA 66
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG+ ++ G CV +P ++PR+A V Y V E +VW+W+ + +
Sbjct: 67 IICGYHGFTYDRTGACVSVP---GQTRVPRTARVAAYPVVEQDSLVWIWIGDPAAADASR 123
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
+P + A P V + + D+ +L++NL+D +H
Sbjct: 124 VPRAPHLADPAMTTVRGMEPIDADYGLLVDNLLDLSH 160
>gi|424740746|ref|ZP_18169125.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-141]
gi|422945537|gb|EKU40489.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-141]
Length = 355
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 5/189 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVSEQHGAIFIWFGIDANEQPKP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 306 VTERTDRGF 314
TD GF
Sbjct: 199 T---TDNGF 204
>gi|410665771|ref|YP_006918142.1| Rieske (2Fe-2S) domain-containing protein [Simiduia agarivorans SA1
= DSM 21679]
gi|409028128|gb|AFV00413.1| Rieske (2Fe-2S) domain-containing protein [Simiduia agarivorans SA1
= DSM 21679]
Length = 341
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI 182
D ++ W+P+ + +++ D P+ + +V+++ + + D CPHR+A LS+GQ
Sbjct: 6 DGSQCWWPVAVARELSADRPMRRQLNGLPLVIFRTNELKPAALVDACPHRMAPLSQGQCT 65
Query: 183 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 242
G+++C YHGW F+G+G+CV+IP + + R VR ES G++WV P N
Sbjct: 66 QGQIQCPYHGWTFDGQGRCVRIPGMQDAHALSRRPLVRALGCVESAGLIWVQTEAGAPLN 125
Query: 243 -PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD---RTDYSAKRED 298
PD+ + F D + + + EN ++ H H R D ++ D
Sbjct: 126 LPDESNGVDQFFMQSTVDATLLD--------IAENFLEAFHTHFVHRGLVRRDTQRQQVD 177
Query: 299 A--QPL--GFEV---TERTDRGF---------AGQWGR 320
A +P+ G EV E+T G+ WGR
Sbjct: 178 ALLRPIDGGIEVAYQNEQTQNGWLSRLFEPSRGASWGR 215
>gi|290956056|ref|YP_003487238.1| oxidoreductase subunit alpha [Streptomyces scabiei 87.22]
gi|260645582|emb|CBG68673.1| oxidoreductase alpha subunit [Streptomyces scabiei 87.22]
Length = 351
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+WY ++V + LG T+ + +V Y+ + +G DRC HR LS+ L R
Sbjct: 8 QWYVAAYAEEVGREL-LGRTILGEPLVFYRTEEEGTPVALHDRCVHRRYPLSKSGLDGDR 66
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG+ ++ G CV +P +IPR+A V +Y V E ++WVW+ +P
Sbjct: 67 IVCGYHGFTYDTTGACVYVP---GQKRIPRTARVASYPVVEQDSLIWVWIGDPALADPQT 123
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
+P + A PG+ V + + D+ +L++NL+D +H
Sbjct: 124 IPRARHLAAPGWTTVRGMEPIDADYGLLVDNLLDLSH 160
>gi|421604687|ref|ZP_16046796.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. CCGE-LA001]
gi|404263204|gb|EJZ28775.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. CCGE-LA001]
Length = 343
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 139/333 (41%), Gaps = 49/333 (14%)
Query: 141 APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 200
A L T+ + IV+Y+ G + +D C HRL LS+G+L + C YHG ++ +G+
Sbjct: 16 ALLPRTICGKHIVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGR 75
Query: 201 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGF 257
C +P+ I SACVR Y V E +W+WM +P +P W + A G
Sbjct: 76 CTF---MPSQETINPSACVRAYPVVERHRYIWLWMGDPALADPALVPDMHWNHDPAWAG- 131
Query: 258 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
D TIH + D+ ++L+NLMD H H S E F+VT +
Sbjct: 132 -DGKTIH-VKCDYRLVLDNLMDLTHETFVHGS---SIGNEAVAEAPFDVTHGEKTVTVTR 186
Query: 318 WGRE--------KDGSMPNF------LRFEAPCVLQNNRESVDNKTG--EKHYSTGLFLC 361
W R+ K P +RFEAPC + + TG E S G+
Sbjct: 187 WMRDIEPPPFWAKQLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGV--- 243
Query: 362 RPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQSASKVFEQDMGFLSSQN 411
G + + T T + F Y + S +F +D L +Q
Sbjct: 244 ----NGFVLNTITPETEKTCHYFWAFVRNYQLGEQRITTEIREGVSGIFHEDELILEAQQ 299
Query: 412 EVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+ ++ P + +++NL +ID R+ +DK
Sbjct: 300 RAM--DENPDR-IFYNL-NIDAGAMWTRRLIDK 328
>gi|87199889|ref|YP_497146.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135570|gb|ABD26312.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY D+ + P T ++ + L++DG GE + RCPHR A L G ++DG L
Sbjct: 23 WYVAGWASDLAGE-PQQRTFLEEPVALFRDGHGEAKAIGGRCPHRFAPLGHGSVVDGALM 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G+G+CV P +P A R Y + E ++W+WM +P +P
Sbjct: 82 CPYHGLRFDGDGRCVHNPH--PGGHLP-DARQRVYPLVERHALLWIWMGDAAKADPASIP 138
Query: 248 WFENFARPGFQDV--STIHELPYDHSILLENLMDPAHIPISH 287
F + P ++ V +T+ E ++ + +N++D +H H
Sbjct: 139 DFSWLSDPRWEAVRGATVAEGHFE--LYSDNILDLSHANFVH 178
>gi|114462397|gb|ABI75133.1| phenylpropionate dioxygenase [Dolichospermum circinale AWQC131C]
Length = 339
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 47/352 (13%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGKGELRCHQDRCPHRLAKLS 177
AD +WY + +D + ++ ++VL++ + ++ QD CPHR LS
Sbjct: 4 ADQILINDWYVVAKVEDCKPGSITTASLLGVKLVLWRSHEQNSPIQVWQDHCPHRGVALS 63
Query: 178 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 237
G++++ L C YHGW++ GKCV+IP P D P SA +TY +E G+VWV +
Sbjct: 64 MGEIVNNTLVCAYHGWRYNEAGKCVQIPAHP-DMIPPASAIAKTYHCQERYGLVWVCLG- 121
Query: 238 KTPPNP-DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAK 295
NP + +P F + P + T L + +++N +D +H P HD +
Sbjct: 122 ----NPVNDIPEFPEWDDPNYHKTYTKSYLIQASAFRVMDNSLDVSHFPFIHD--GWLGD 175
Query: 296 REDAQPLGFEVTERTDRGFAGQWGRE--------KDGSMPNFLRFEAPCVLQNNRESVDN 347
R + FEV D G++ + +D S N+LR P ES +
Sbjct: 176 RNYTKVENFEVKLDKDGLTMGKYQFQTSRIVSDIEDDSWVNWLRLSHPLCQYCVSESPEM 235
Query: 348 KTGEKHYSTGLFLCRPTGQGKSML-------IVRFGTTGTSPWIKLFPDWYFHQSASKVF 400
+ L P + KS+L +R + T KL ++ +
Sbjct: 236 RI------VDLMTITPIDEDKSILQMLITWKCLRMLDSKTLE-SKLLTEY------DETI 282
Query: 401 EQDMGFLSSQNEVLLKEKVPTKEL--YFNLRSI----DTWVAEYRKWMDKAG 446
EQD+ L +Q L +P K++ + L+ I D YR+W+ + G
Sbjct: 283 EQDIRILHAQQPARLP-LLPPKQINTQWLLQEIHVPSDKCTVAYRRWLKELG 333
>gi|347528222|ref|YP_004834969.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136903|dbj|BAK66512.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 373
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 9/188 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +V + PL + DQ +++Y+D G QDRCPHR A LS G+ + +E
Sbjct: 9 WYAAAFSDEV-GEKPLARKLLDQDLMIYRDSAGRPILLQDRCPHRFAPLSLGKTVGDEIE 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+ G C P + + R+A VR Y V E G++W W + LP
Sbjct: 68 CPYHGLRFDRTGACSHNPHMKGGGPL-RAAAVRAYPVMEKYGILWFWPGDPGFADEAILP 126
Query: 248 ---WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
+ E R ++ V + + ++ ++++NL+D +H H ++ K DA+
Sbjct: 127 KVKFLEETDR--YRLVKGLLHVEGNYQLVIDNLLDLSHAQFIH--PGFAIKGVDAEQALA 182
Query: 305 EVTERTDR 312
T R +R
Sbjct: 183 ATTTRLER 190
>gi|3915234|sp|O05616.1|VANA_PSEUH RecName: Full=Vanillate O-demethylase oxygenase subunit; AltName:
Full=4-hydroxy-3-methoxybenzoate demethylase
gi|1946284|emb|CAA72287.1| a-subunit oxygenase [Pseudomonas sp.]
Length = 354
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + +++IV Y+ +G + +D CPHR A LS G + DG+L
Sbjct: 7 WY-VACTPDEIADKPLGRQICNEKIVFYRGPEGRVAAVEDFCPHRGAPLSLGFVRDGKLI 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + EGK + +P ++ C+++Y V+E G +WVW + +P +
Sbjct: 66 CGYHGLEMGCEGKTLAMP----GQRVQGFPCIKSYAVEERYGFIWVWPGDRELADPALIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
E P + ++ + D+ ++++NLMD H H + K D P+ V
Sbjct: 122 HLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVH-ASSIGQKEIDEAPVSTRVE 180
Query: 308 ERT 310
T
Sbjct: 181 GDT 183
>gi|399154477|ref|ZP_10754544.1| Rieske family iron-sulfur cluster-binding protein [gamma
proteobacterium SCGC AAA007-O20]
Length = 346
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WYP+ + +V +PLG+ V +++VL++ G++ C +D+CPHR A LS G+L +G +
Sbjct: 21 QWYPVAKSVEVKSISPLGIEVLGEKLVLWRGDSGKVHCIKDQCPHRGAPLSFGRLHEGHI 80
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHG GEG V +P + + K VR +EV E ++++M ++
Sbjct: 81 SCRYHGIVVSGEGVVVTVPAMK-NCKFEGQKIVRAFEVTEIYDAIFIYMPSAENEKAPRM 139
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT---DYSAKRE----DA 299
+ + F + ++ L+NL DP H H + Y K + D
Sbjct: 140 VFPKEFLSDSWSGFLCTAVWKTNYRYALDNLADPMHGSYLHAESFTLAYGTKEDLFKVDH 199
Query: 300 QPLGFEVTERTDRGFAGQWGREK--DGSMPNFLRFEAP 335
GF V+ G W + DG+M FL P
Sbjct: 200 TENGFIVSRTGQLGENFDWTEFEMHDGTMFCFLDIPYP 237
>gi|239814693|ref|YP_002943603.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239801270|gb|ACS18337.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 449
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ + D A L + + +VLYKD G RCPHR A +S G + L
Sbjct: 27 WHPVAGASEFDDKAVKPLRILGEDLVLYKDLGGNYGLVDRRCPHRNADMSYGFVEQCGLR 86
Query: 188 CLYHGWQFEGEGKCVKIP---QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
C YHGWQ++ G+CV P L DA++ R+ ++ Y V+E G++W +M + P
Sbjct: 87 CSYHGWQYDQSGQCVHQPFEETLDPDARMRRNTKIKAYPVQEKAGLLWAYMGPQPAP--- 143
Query: 245 KLPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
LP +E F R GF + E+P + EN +DP H +H+
Sbjct: 144 LLPDWELFNFRNGFAQ-AVFAEIPCNWFQCQENSIDPVHFEWTHN 187
>gi|338530424|ref|YP_004663758.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
gi|337256520|gb|AEI62680.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
Length = 357
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 125/318 (39%), Gaps = 55/318 (17%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ L + ++ D PL T+ +VL++ G+ DRCPHR LS G++ +G+L+
Sbjct: 20 WFILCASNEL-GDKPLARTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVKEGQLQ 78
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW+F+GEG+C IP + R+ C + +E G VWV+ + P P +
Sbjct: 79 CGYHGWRFDGEGQCRAIPGFLGEPGA-RARCATAHATREQDGFVWVYSTPGVEPTTEPYR 137
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH----------DRTDYSAK 295
P E AR + V I P LEN +D H H + + +
Sbjct: 138 FPLLE--ARE-YTTVRRILRAPGSLHATLENTLDVPHTAYLHGGLFRTEEKRNEIEVVVR 194
Query: 296 REDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
R + + E G G+ G + +F RF P + Q V+ + G+
Sbjct: 195 RGADKVEAEYIGEPRPSGLVGKLLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGD---- 245
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKL----------FPDWYFHQS-------ASK 398
S ++V T S W L P W + A
Sbjct: 246 ------------ASHIMVTSAMTPVSEWDTLVYAVVTFRLPVPRWLVRAALPLIMPVALH 293
Query: 399 VFEQDMGFLSSQNEVLLK 416
+F QD L Q E + +
Sbjct: 294 IFGQDARILRQQTETIRR 311
>gi|443311426|ref|ZP_21041054.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
gi|442778464|gb|ELR88729.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
Length = 354
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ + + ++ + I +Y+D G++ +D CPH+ +L G++ L
Sbjct: 27 WYAVGWADELKIGEIMPVVIWSRAIAIYRDQNGQIHALEDACPHKGVQLHRGKVTGCNLA 86
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F G+G CV IP LP K+PR A R Y V+E ++W++ N LP
Sbjct: 87 CGYHGWEFNGDGDCVNIPYLPKTQKLPR-AQARNYPVEEKYNLIWIFPGDPALANTSDLP 145
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
+ + V SI EN MD H
Sbjct: 146 NIPELTQKEWLVVPLSARFQAHFSICNENTMDVFH 180
>gi|402820979|ref|ZP_10870539.1| Rieske (2Fe-2S) domain-containing protein [alpha proteobacterium
IMCC14465]
gi|402510211|gb|EJW20480.1| Rieske (2Fe-2S) domain-containing protein [alpha proteobacterium
IMCC14465]
Length = 358
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 26/194 (13%)
Query: 118 RVADYDWTE-----EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHR 172
+ ADYD E W+ + T +V PL L F Q +VLY+ G L CPH
Sbjct: 3 KTADYDLGEFTFPRGWFMVARTDEV-SKKPLNLRYFGQDMVLYRGDSGRLVLMDAYCPHM 61
Query: 173 LAKLSEGQL---------IDG-RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTY 222
L + + IDG + C YHGWQF +G CV+IP P A IP SAC+RTY
Sbjct: 62 GTHLGKNETSYVVMDNEHIDGDNIRCPYHGWQFGPDGNCVEIPYSP--APIPASACIRTY 119
Query: 223 EVKESQGVVWVWM-SQKTPPN--PDKLPWFEN--FARPGFQDVSTIHELPYDHSILLENL 277
V+E G V +W +++ PN P +LP +E+ + + +D+ + + P + +++N+
Sbjct: 120 PVQEWGGSVLMWYDAEQGEPNFDPPELPQWEDPSWVQWKIEDLGELGQHPME---VIDNM 176
Query: 278 MDPAHIPISHDRTD 291
D AH+ H T+
Sbjct: 177 ADKAHLAPIHGSTN 190
>gi|367476973|ref|ZP_09476338.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 285]
gi|365270752|emb|CCD88806.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 285]
Length = 452
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 128 WYPLYLTKDVPDDAPL-GLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
W P L ++ + P+ + + QQ VL+KD +G CPHR A L+ G+L G L
Sbjct: 27 WQPAALVDELAGERPVRAVKLLGQQFVLFKDAQGRYGLLDRDCPHRGADLAFGRLEHGGL 86
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C +HGW F+ +G+C++ P PA + + ++ R+Y V E G++W W+ + PP
Sbjct: 87 RCSFHGWLFDVDGQCLETPAEPAGSPLCKNVKQRSYPVIEKGGILWAWLGEGAPP---AF 143
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
P + F P + + + LE +DPAH H
Sbjct: 144 PDLDCFTAPDTYTFAFKGLIECNWLQALEVGIDPAHASFLH 184
>gi|408376594|ref|ZP_11174198.1| oxidoreductase [Agrobacterium albertimagni AOL15]
gi|407749284|gb|EKF60796.1| oxidoreductase [Agrobacterium albertimagni AOL15]
Length = 223
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W P+ L+ D+ G V ++ V+++D KG + +DRCPHR ++S G + +
Sbjct: 7 WIPVALSADIEAGTSAGTLVNGEERVVWRDDKGAIHVWEDRCPHRGMRMSFGFVRGDHIA 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHGW+++ G+C IP P D ++P++ V T+ E G+VW+ P LP
Sbjct: 67 CLYHGWRYDTGGQCRYIPAHP-DLEVPQTIKVPTFAATERAGIVWMAPEGTDPAELSTLP 125
Query: 248 WFENFARPGFQDVST 262
R F D+ST
Sbjct: 126 ETAEVVRSLFLDLST 140
>gi|183598765|ref|ZP_02960258.1| hypothetical protein PROSTU_02191 [Providencia stuartii ATCC 25827]
gi|386745116|ref|YP_006218295.1| Rieske (2Fe-2S) domain-containing protein [Providencia stuartii
MRSN 2154]
gi|188020967|gb|EDU59007.1| rieske [2Fe-2S] domain protein [Providencia stuartii ATCC 25827]
gi|384481809|gb|AFH95604.1| Rieske (2Fe-2S) domain-containing protein [Providencia stuartii
MRSN 2154]
Length = 345
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 18/208 (8%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WYP+ + +V + P+G+T ++QIVL++D +G++ +DRCPHR A+LS G + R+
Sbjct: 21 QWYPVLSSWEVTSN-PIGITRLEEQIVLWRDQQGQIHALEDRCPHRGARLSMGWNLGERI 79
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW--MSQKTPPN-- 242
C YHG + G+G +P + + + C++TY V+E G ++++ ++ + PP
Sbjct: 80 ACWYHGVEVGGDGIVKDVPAV-SQCPLEGQKCLKTYPVQEYHGAIFLYFAITDEEPPTLA 138
Query: 243 -PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
P++L EN + F +T H ++ LEN+MDP H H + A +
Sbjct: 139 FPEELADSENHSH--FLCTATWH---CNYQYALENVMDPMHGTYLHSSSHSMADGDKQSE 193
Query: 302 LGFEVTERTDRGFAGQWGREKDGSMPNF 329
+ + E T GF R+ D NF
Sbjct: 194 M---ILEPTQNGFI---FRKNDQMGVNF 215
>gi|148554469|ref|YP_001262051.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499659|gb|ABQ67913.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 353
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 142 PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 201
PLG + D +VLY+ GE+ +DRCPHR A LS G+L +EC YHG+QF +G+C
Sbjct: 35 PLGRWLLDTPVVLYRTQGGEVVALEDRCPHRQAPLSIGKLQGDAIECGYHGFQFGRDGRC 94
Query: 202 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK----TPPNPDKLPWFENFARPGF 257
V++P + + P + T+ V+E +VWV++ P P + W + P F
Sbjct: 95 VRVPTMAS----PPPISIETFPVREIGPLVWVYLGDSACLDAVPPPPTMAWMSD---PSF 147
Query: 258 QDVSTIHELPYDHSILLENLMDPAHIPISH 287
E+ ++ +L EN++D H H
Sbjct: 148 AIRQGKTEIAANYLLLKENVLDLTHFGYVH 177
>gi|393774181|ref|ZP_10362554.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium sp. Rr
2-17]
gi|392720390|gb|EIZ77882.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium sp. Rr
2-17]
Length = 437
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 128 WYPLYLTKDVPDDAPL-GLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
W P+ L +++ P + V Q +VL++DG G+L CPHR A L+ G+L DG L
Sbjct: 26 WQPIALLEELDGPRPAKAVKVLGQDMVLFRDGAGQLGLLDRDCPHRGADLAFGRLEDGGL 85
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
CL+HGW F+ +G C++ P P+ + + R Y V E G+++ ++ + PP
Sbjct: 86 RCLFHGWLFDVDGNCIQTPGEPSGSTLCTRVKQRAYPVVERAGMIFGFLGEGEPP---AF 142
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P + FA P + L + LE +DPAH H + EDA G +
Sbjct: 143 PGLDCFAAPDSHVFAFKGYLDCNWLQALEVGVDPAHASFLH----RFFEDEDADAYGKQF 198
Query: 307 TERTDRGFAGQWGREKDGSMPNFLR-FEAPCV 337
R+ + D +M LR FE P +
Sbjct: 199 RARS---------ADSDMTMIQVLREFENPDI 221
>gi|421625348|ref|ZP_16066201.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC098]
gi|408699017|gb|EKL44502.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC098]
Length = 355
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 306 VTE 308
TE
Sbjct: 199 TTE 201
>gi|421675042|ref|ZP_16114968.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC065]
gi|421693385|ref|ZP_16133027.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-116]
gi|404557888|gb|EKA63176.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-116]
gi|410383057|gb|EKP35591.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC065]
Length = 355
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 306 VTE 308
TE
Sbjct: 199 TTE 201
>gi|417545143|ref|ZP_12196229.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC032]
gi|421669761|ref|ZP_16109774.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC099]
gi|400383031|gb|EJP41709.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC032]
gi|410387230|gb|EKP39686.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC099]
Length = 355
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 306 VTE 308
TE
Sbjct: 199 TTE 201
>gi|388544432|ref|ZP_10147720.1| Rieske 2Fe-2S family protein [Pseudomonas sp. M47T1]
gi|388277615|gb|EIK97189.1| Rieske 2Fe-2S family protein [Pseudomonas sp. M47T1]
Length = 344
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 17/190 (8%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D P T+ +++VL+ +G + DRC HR A+LS+G + DG++ C YHGW+++ G
Sbjct: 24 DGPHPFTLLGERLVLFMGNQGPVAL-ADRCCHRTAQLSKGWVEDGQIVCGYHGWRYDKSG 82
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 259
CV IPQL +A IP A V Y +E G VWV + + PD FE + P ++
Sbjct: 83 ACVCIPQLADNAPIPNGARVPAYRCEEKYGYVWVCLGEPLQGIPD----FEEDSSPAYRR 138
Query: 260 VSTIHELPYDHSIL--LENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
+ +E ++ S L +EN D +H H + ++ + QP +++ + +
Sbjct: 139 IFQFYER-WNTSPLRFMENSFDNSHFSFVH-KANFGMLNQ-PQPSSYQLQQT-------E 188
Query: 318 WGREKDGSMP 327
WG E + +P
Sbjct: 189 WGFEAETVVP 198
>gi|418532825|ref|ZP_13098722.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
gi|371450151|gb|EHN63206.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
Length = 359
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++WY ++ D P+ T+ Q +VL++ G + +DRC HR LS G +
Sbjct: 18 DQWYVAGFAWELKDQ-PVARTLLGQPVVLFRTADGRVAALEDRCCHRELPLSCGTVEAAG 76
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD- 244
L C YHG F EG+C++I P +IP ACV+++E++E ++W+WM PD
Sbjct: 77 LRCGYHGLLFSHEGQCLEI---PGQERIPAKACVKSFELRERDQILWIWMGATPDSVPDT 133
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+ P + + P ++ ++ + ++ +NL+D +H+ H +T
Sbjct: 134 EPPAYAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKT 179
>gi|258543294|ref|YP_003188727.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|384043214|ref|YP_005481958.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-12]
gi|384051731|ref|YP_005478794.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-03]
gi|384054838|ref|YP_005487932.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-07]
gi|384058073|ref|YP_005490740.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-22]
gi|384060714|ref|YP_005499842.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-26]
gi|384064006|ref|YP_005484648.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-32]
gi|384120017|ref|YP_005502641.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256634372|dbj|BAI00348.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|256637430|dbj|BAI03399.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-03]
gi|256640482|dbj|BAI06444.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-07]
gi|256643539|dbj|BAI09494.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-22]
gi|256646594|dbj|BAI12542.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-26]
gi|256649647|dbj|BAI15588.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-32]
gi|256652635|dbj|BAI18569.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655691|dbj|BAI21618.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-12]
Length = 351
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 21/221 (9%)
Query: 108 ASEEESRGERRV---ADYDW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGE 161
A ESR R + AD DW W+P+ L +++ +D PLG+T+ D +V+Y+ G+ +
Sbjct: 7 ARPTESRLPRELSFDAD-DWLILASYWHPIALVREL-EDKPLGVTLLDAPLVIYRAGE-D 63
Query: 162 LRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRT 221
+ D CPHR LS G+ + C YHG+QF +G+CV+IP P D+ IP +RT
Sbjct: 64 IVVADDLCPHRGVPLSMGKGNGQTVACAYHGFQFGHQGQCVRIPAHP-DSAIPSRLNLRT 122
Query: 222 YEVKESQGVVWVWMSQKTPPNPD-KLPWFENFARPGFQDVSTI-HELPYDHSILLENLMD 279
Y V E G++W + + N D +P ++ GFQ ++ ++ +E +D
Sbjct: 123 YPVVERYGLIWTCLRPQD--NEDISIPSMPHWDEAGFQQINCPWIDIAGFAGRQVEGFID 180
Query: 280 PAHIPISH-------DRTDYSAKREDAQPLGFEVTERTDRG 313
AH H D A P GFE R++ G
Sbjct: 181 VAHFAFVHTETFADPDNPVVPAYMPKMTPYGFEAEYRSNVG 221
>gi|334345778|ref|YP_004554330.1| Rieske (2Fe-2S) domain-containing protein [Sphingobium
chlorophenolicum L-1]
gi|334102400|gb|AEG49824.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sphingobium
chlorophenolicum L-1]
Length = 351
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 9/219 (4%)
Query: 118 RVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLS 177
+ D+ + WY L+ +V + + + +++Y+ G+ DRCPHR A LS
Sbjct: 2 KTRDHFLMKAWYAAALSTEVDGEQLFHRKILGKSVLIYRTADGKAVAMHDRCPHRFAPLS 61
Query: 178 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 237
G+ ++ C YH +F +G+C P + IP++A V T+ ++E G +W+WM
Sbjct: 62 LGKRDGDQISCPYHALKFNAQGQCTHNPH--GNGHIPKAAQVDTFPIEERYGFLWIWMD- 118
Query: 238 KTPPNPDKLPWFE--NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAK 295
+ P+ LP + + P + +H LP ++ ++++N+MD +H I H +
Sbjct: 119 PSEPDLSLLPDYSPLDIGHPNALAHTYMH-LPVNYELIIDNVMDLSH--IDHVHGEIITT 175
Query: 296 REDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEA 334
R P+ + E T R + +W + +M F F A
Sbjct: 176 RGKLSPIVPTLRE-TARNISARWEWSQQPAMMIFAPFLA 213
>gi|445400960|ref|ZP_21430261.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-57]
gi|444783087|gb|ELX06949.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-57]
Length = 355
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 306 VTE 308
TE
Sbjct: 199 TTE 201
>gi|169796856|ref|YP_001714649.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AYE]
gi|184157229|ref|YP_001845568.1| phenylpropionate dioxygenase [Acinetobacter baumannii ACICU]
gi|213156753|ref|YP_002318414.1| rieske (2Fe-2S) protein [Acinetobacter baumannii AB0057]
gi|215484333|ref|YP_002326562.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|239503023|ref|ZP_04662333.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB900]
gi|260555879|ref|ZP_05828099.1| phenylpropionate dioxygenase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301345243|ref|ZP_07225984.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB056]
gi|301510671|ref|ZP_07235908.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB058]
gi|301594444|ref|ZP_07239452.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB059]
gi|332854487|ref|ZP_08435394.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332870923|ref|ZP_08439555.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332872915|ref|ZP_08440879.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6014059]
gi|384130893|ref|YP_005513505.1| phenylpropionate dioxygenase [Acinetobacter baumannii 1656-2]
gi|384142295|ref|YP_005525005.1| putative vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii MDR-ZJ06]
gi|385236595|ref|YP_005797934.1| phenylpropionate dioxygenase [Acinetobacter baumannii TCDC-AB0715]
gi|387124867|ref|YP_006290749.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii MDR-TJ]
gi|403677084|ref|ZP_10938908.1| phenylpropionate dioxygenase [Acinetobacter sp. NCTC 10304]
gi|407931926|ref|YP_006847569.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii TYTH-1]
gi|416148180|ref|ZP_11602229.1| phenylpropionate dioxygenase [Acinetobacter baumannii AB210]
gi|417553549|ref|ZP_12204618.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-81]
gi|417561934|ref|ZP_12212813.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC137]
gi|417570576|ref|ZP_12221433.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC189]
gi|417571850|ref|ZP_12222704.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Canada
BC-5]
gi|417576026|ref|ZP_12226871.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-17]
gi|417869238|ref|ZP_12514230.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH1]
gi|417872623|ref|ZP_12517519.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH2]
gi|417877044|ref|ZP_12521780.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH3]
gi|417880686|ref|ZP_12525155.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH4]
gi|421200793|ref|ZP_15657952.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC109]
gi|421202347|ref|ZP_15659498.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AC12]
gi|421456520|ref|ZP_15905862.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-123]
gi|421535547|ref|ZP_15981806.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AC30]
gi|421620577|ref|ZP_16061509.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC074]
gi|421631041|ref|ZP_16071730.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC180]
gi|421635432|ref|ZP_16076034.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-13]
gi|421643656|ref|ZP_16084150.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-235]
gi|421646300|ref|ZP_16086752.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-251]
gi|421651352|ref|ZP_16091721.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC0162]
gi|421656613|ref|ZP_16096918.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-72]
gi|421658629|ref|ZP_16098860.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-83]
gi|421661308|ref|ZP_16101484.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC110]
gi|421679862|ref|ZP_16119730.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC111]
gi|421689295|ref|ZP_16128979.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-143]
gi|421694768|ref|ZP_16134385.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-692]
gi|421700346|ref|ZP_16139863.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-58]
gi|421702749|ref|ZP_16142225.1| phenylpropionate dioxygenase [Acinetobacter baumannii ZWS1122]
gi|421706499|ref|ZP_16145912.1| phenylpropionate dioxygenase [Acinetobacter baumannii ZWS1219]
gi|421786373|ref|ZP_16222776.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-82]
gi|421792464|ref|ZP_16228617.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-2]
gi|421796080|ref|ZP_16232149.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-21]
gi|421801728|ref|ZP_16237685.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Canada BC1]
gi|421805052|ref|ZP_16240946.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-A-694]
gi|424053329|ref|ZP_17790861.1| hypothetical protein W9G_02018 [Acinetobacter baumannii Ab11111]
gi|424060796|ref|ZP_17798287.1| hypothetical protein W9K_01910 [Acinetobacter baumannii Ab33333]
gi|424063008|ref|ZP_17800493.1| hypothetical protein W9M_00291 [Acinetobacter baumannii Ab44444]
gi|425747781|ref|ZP_18865779.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-348]
gi|425752555|ref|ZP_18870462.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-113]
gi|445439292|ref|ZP_21441629.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC021]
gi|445454503|ref|ZP_21445425.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-A-92]
gi|445456349|ref|ZP_21445795.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC047]
gi|445466287|ref|ZP_21450266.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC338]
gi|445475327|ref|ZP_21453329.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-78]
gi|445491472|ref|ZP_21459787.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii AA-014]
gi|169149783|emb|CAM87674.1| putative vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AYE]
gi|183208823|gb|ACC56221.1| Phenylpropionate dioxygenase [Acinetobacter baumannii ACICU]
gi|193076681|gb|ABO11379.2| putative vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii ATCC 17978]
gi|213055913|gb|ACJ40815.1| rieske (2Fe-2S) protein [Acinetobacter baumannii AB0057]
gi|213987162|gb|ACJ57461.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|260410790|gb|EEX04088.1| phenylpropionate dioxygenase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|322507113|gb|ADX02567.1| phenylpropionate dioxygenase [Acinetobacter baumannii 1656-2]
gi|323517093|gb|ADX91474.1| phenylpropionate dioxygenase [Acinetobacter baumannii TCDC-AB0715]
gi|332727975|gb|EGJ59368.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332731886|gb|EGJ63165.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332738926|gb|EGJ69789.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6014059]
gi|333365187|gb|EGK47201.1| phenylpropionate dioxygenase [Acinetobacter baumannii AB210]
gi|342231009|gb|EGT95828.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH1]
gi|342233400|gb|EGT98135.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH2]
gi|342236483|gb|EGU01003.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH3]
gi|342239522|gb|EGU03921.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH4]
gi|347592788|gb|AEP05509.1| putative vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii MDR-ZJ06]
gi|385879359|gb|AFI96454.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii MDR-TJ]
gi|395524516|gb|EJG12605.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC137]
gi|395551024|gb|EJG17033.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC189]
gi|395562825|gb|EJG24478.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC109]
gi|395569247|gb|EJG29909.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-17]
gi|398328302|gb|EJN44429.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AC12]
gi|400207418|gb|EJO38388.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Canada
BC-5]
gi|400210948|gb|EJO41912.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-123]
gi|400389966|gb|EJP57013.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-81]
gi|404558675|gb|EKA63956.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-143]
gi|404567003|gb|EKA72131.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-692]
gi|404570728|gb|EKA75801.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-58]
gi|404668748|gb|EKB36657.1| hypothetical protein W9K_01910 [Acinetobacter baumannii Ab33333]
gi|404669117|gb|EKB37024.1| hypothetical protein W9G_02018 [Acinetobacter baumannii Ab11111]
gi|404675010|gb|EKB42735.1| hypothetical protein W9M_00291 [Acinetobacter baumannii Ab44444]
gi|407193564|gb|EKE64720.1| phenylpropionate dioxygenase [Acinetobacter baumannii ZWS1122]
gi|407193848|gb|EKE64997.1| phenylpropionate dioxygenase [Acinetobacter baumannii ZWS1219]
gi|407900507|gb|AFU37338.1| putative vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii TYTH-1]
gi|408504940|gb|EKK06670.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-72]
gi|408507962|gb|EKK09649.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC0162]
gi|408508339|gb|EKK10025.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-235]
gi|408517687|gb|EKK19225.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-251]
gi|408695207|gb|EKL40763.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC180]
gi|408700264|gb|EKL45727.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC074]
gi|408702251|gb|EKL47664.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-13]
gi|408709325|gb|EKL54571.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-83]
gi|408715720|gb|EKL60842.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC110]
gi|409986389|gb|EKO42583.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AC30]
gi|410390681|gb|EKP43064.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC111]
gi|410400044|gb|EKP52224.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-2]
gi|410400276|gb|EKP52455.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-21]
gi|410404985|gb|EKP57038.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Canada BC1]
gi|410410102|gb|EKP62022.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-A-694]
gi|410412851|gb|EKP64699.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-82]
gi|425492820|gb|EKU59072.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-348]
gi|425498786|gb|EKU64852.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-113]
gi|444752246|gb|ELW76935.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC021]
gi|444752501|gb|ELW77185.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-A-92]
gi|444764606|gb|ELW88919.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii AA-014]
gi|444778098|gb|ELX02117.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC338]
gi|444778295|gb|ELX02313.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC047]
gi|444778991|gb|ELX02986.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-78]
gi|452954292|gb|EME59696.1| vanillate O-demethylase oxygenase subunit (VanA-like) protein
[Acinetobacter baumannii MSP4-16]
Length = 355
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 306 VTE 308
TE
Sbjct: 199 TTE 201
>gi|260551175|ref|ZP_05825378.1| phenylpropionate dioxygenase [Acinetobacter sp. RUH2624]
gi|424056450|ref|ZP_17793971.1| hypothetical protein W9I_02820 [Acinetobacter nosocomialis Ab22222]
gi|425741003|ref|ZP_18859162.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-487]
gi|260405780|gb|EEW99269.1| phenylpropionate dioxygenase [Acinetobacter sp. RUH2624]
gi|407441490|gb|EKF47996.1| hypothetical protein W9I_02820 [Acinetobacter nosocomialis Ab22222]
gi|425493850|gb|EKU60074.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-487]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 306 VTE 308
TE
Sbjct: 199 TTE 201
>gi|254438166|ref|ZP_05051660.1| Rieske (2Fe-2S) domain protein [Octadecabacter antarcticus 307]
gi|198253612|gb|EDY77926.1| Rieske (2Fe-2S) domain protein [Octadecabacter antarcticus 307]
Length = 346
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V D +TV + + +++ GEL +D CPHR LS+G++ +E
Sbjct: 7 WYVAAWNHEVTRDLQ-QITVLGENVCVFRSEAGELVGLEDACPHRKLPLSKGRIKGDTVE 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F+ G+CV P +IP +A V Y + E G+VW+WM + +
Sbjct: 66 CGYHGLTFDCAGQCV---WAPGTGRIPSNARVHAYPLHEKYGLVWIWMGNPALADVTDIF 122
Query: 248 WFENFARPGF-QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
EN+ P + + EL ++ ++ +NL+DP H+ H + ++A PL
Sbjct: 123 EIENYGNPAWGMNRGDAMELDCNYLLMCDNLLDPTHVAWVH-QNSFAAPATKDTPLRVSK 181
Query: 307 TE 308
TE
Sbjct: 182 TE 183
>gi|421465153|ref|ZP_15913841.1| Rieske [2Fe-2S] domain protein [Acinetobacter radioresistens
WC-A-157]
gi|400204415|gb|EJO35399.1| Rieske [2Fe-2S] domain protein [Acinetobacter radioresistens
WC-A-157]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C++ Y V E G +++W +P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKNYPVIEQHGAIFIWFDLDANESPKP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 306 VTE 308
TE
Sbjct: 199 TTE 201
>gi|428300003|ref|YP_007138309.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 6303]
gi|428236547|gb|AFZ02337.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 6303]
Length = 340
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +P T+ +Q+IVL+ D +G +DRC HR A+LS G++++G +
Sbjct: 13 WYPVVPINLLSKSSPHAFTLLNQKIVLWLDSQGNPAAVKDRCCHRSAQLSLGKVVNGDIV 72
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW F G C +PQL + IP + V +Y E G WV + P+ +P
Sbjct: 73 CPYHGWNFNSTGTCTHVPQL-NNGMIPSNYQVTSYACVERYGYAWVCLEDPLCDIPN-IP 130
Query: 248 WFENFARPGFQDVSTIHEL--PYDHSIL--LENLMDPAHIPISHDRTDYSAKREDAQPLG 303
NF + IHE P++ + L +EN D AH H T E P
Sbjct: 131 EARNF------EYRLIHEFYEPWNCAGLRVMENEFDTAHPTFVHTTT--FGNEEHPIPDK 182
Query: 304 FEVTERTDRGFAGQWGRE 321
E+ E+ +WG E
Sbjct: 183 MELEEK-------EWGIE 193
>gi|121605619|ref|YP_982948.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120594588|gb|ABM38027.1| Rieske (2Fe-2S) domain protein [Polaromonas naphthalenivorans CJ2]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 11/163 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +D+ DD PLG + ++IV Y+ +G + +D CPHR A LS G + +G+L
Sbjct: 7 WYVACTPQDI-DDKPLGRKICGERIVFYRAQEGRVAALEDFCPHRGAPLSLGFVSEGKLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GK + +P ++ +R+Y V+E G +WVW +P K+P
Sbjct: 66 CGYHGLEMGCDGKTIAMP----GQRVRGFPQIRSYPVEERYGFIWVWPGDAAQADPAKIP 121
Query: 248 ---WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
W+EN P + + + D+ ++++NLMD H H
Sbjct: 122 HQDWYEN---PEWAYGGGMFHIHCDYRLMIDNLMDLTHETYVH 161
>gi|209965428|ref|YP_002298343.1| Rieske [2Fe-2S] domain-containing protein [Rhodospirillum centenum
SW]
gi|209958894|gb|ACI99530.1| Rieske [2Fe-2S] domain protein [Rhodospirillum centenum SW]
Length = 344
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 127/319 (39%), Gaps = 27/319 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + L T+ + ++ + G +D CPHR LS G+ +E
Sbjct: 12 WYFALPGRALKRGRMLAKTLLGEPVLFGRGADGAAFALRDICPHRGIPLSCGRFDGREVE 71
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPN-PDK 245
C YHGW+F +G C IP L S VR+Y V+E G VW+WM P P
Sbjct: 72 CCYHGWRFGADGGCTAIPSLVEGQAFDLSRIRVRSYPVRELNGNVWIWMGSGEPDGEPPA 131
Query: 246 LPWFENFARPGFQDVSTIHELP--YDHSILLENLMDPAHIPISHDRTDYSAKR---EDAQ 300
+P FA D+ + P DH+++ LMDPAH P H + + R E A+
Sbjct: 132 MP---GFAPDRAADMVEVMAFPCFVDHAVI--GLMDPAHGPFVHRSWFWRSARSIHEKAK 186
Query: 301 -----PLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCV----LQNNRESVDNKTGE 351
PLGF + + + R G+ +RF+ P + ++ R +V N T
Sbjct: 187 AFGPAPLGFRMKRHRPSSNSAAY-RLLGGAPETEIRFQLPGIRIEHIEVGRHTVVNLT-- 243
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQN 411
+ T M T P ++ F + Q V +Q G
Sbjct: 244 ---TVTPLDAETTEVTNQMYWTMGWATLAKPLLRPFAAKFLRQDRDVVVQQQRGLRHDPA 300
Query: 412 EVLLKEKVPTKELYFNLRS 430
+L+K+ Y+ L++
Sbjct: 301 LMLIKDADTQARWYYQLKA 319
>gi|349688384|ref|ZP_08899526.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 350
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 123 DWT---EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
DWT WYP+ L +++ D PLG+T+ D +V+Y+ G G + D CPHR LS G
Sbjct: 24 DWTILARCWYPVALVREL-GDQPLGVTLLDAPLVVYRAGDG-IVIADDLCPHRGVPLSMG 81
Query: 180 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 239
+ + C YHG++F G+GKCV++P P D+ IP +RTY E G++W + +
Sbjct: 82 KGDGQTVACAYHGFRFGGQGKCVRVPAHP-DSAIPSKLNLRTYPAVERYGLIWTCLRPEG 140
Query: 240 PPNPDKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDYSAKRED 298
+ +P ++ P +Q ++ ++ +E +D AH H TD A E+
Sbjct: 141 --DTPAIPPMPHWDDPDYQQINCPWIDIAGFAGRQVEGFIDVAHFAFVH--TDTFADPEN 196
Query: 299 ---------AQPLGFEVTERTDRG 313
P GFE R+ G
Sbjct: 197 PVVPPYKTRITPDGFEAEYRSSVG 220
>gi|456357222|dbj|BAM91667.1| vanillate O-demethylase oxygenase, iron-sulfur subunit, vanA-like
protein [Agromonas oligotrophica S58]
Length = 347
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 145/346 (41%), Gaps = 50/346 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V A L T+ + +V+Y+ G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KQALLPRTICGKHVVMYRKADGTVAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F +G+C +P+ I SACVR Y E +W+WM +P +P
Sbjct: 69 CGYHGLKFNPQGRCTF---MPSQETINPSACVRAYPAVERHRFIWLWMGDPALADPATIP 125
Query: 248 ---WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
W + A G D TIH + D+ ++++NLMD H H S E F
Sbjct: 126 DMHWNHDPAWAG--DGKTIH-VNCDYRLVVDNLMDLTHETFVHGS---SIGNEALTEAPF 179
Query: 305 EVT--ERTDRG------------FAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
+VT ERT +A Q G+E +RFEAPC + + TG
Sbjct: 180 DVTHGERTATVTRWMHGIEPPPFWARQLGKEGLVDRWQIIRFEAPCTVTIDVGVAPTGTG 239
Query: 351 --EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQSASK 398
E S G+ G + + T T + F Y + S
Sbjct: 240 APEGDRSQGV-------NGMVLNTITPETERTCHYFWAFARNYQISEQRLTTEIREGVSG 292
Query: 399 VFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+F +D L +Q + ++ P + +++NL +ID R+ +D+
Sbjct: 293 IFREDELILEAQQRAM--DENPGR-VFYNL-NIDAGAMWARRIIDR 334
>gi|427731793|ref|YP_007078030.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427367712|gb|AFY50433.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 340
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 29/304 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + L++ + + L ++ + + +++ G+ +DRC HR ++LS G + G L+
Sbjct: 7 WYIVTLSEQLKSNTVLARSLLGEWLAIFRGEDGQPVALRDRCLHRSSRLSAGNVCQGALQ 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW ++ GK + +P D + + + Y KE G V+V +++ P+ D P
Sbjct: 67 CPYHGWVYDRNGKVIAVPAEGVDFQPSQQRQAKAYATKEQDGYVYVRLAEN--PSVDFAP 124
Query: 248 W-FENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDYSAKRE 297
+ ++ G++ V I+ + + EN +D H H + + + +RE
Sbjct: 125 FSMPHYGEAGWETVRVINRFANNVTNCAENFIDIPHTAFVHPGVFRTSRQQKLEMTVERE 184
Query: 298 DAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTG 357
+ L E ++ G+ ++ + + + RF P N SV+ + G +
Sbjct: 185 NGAVLVEYRNENSNLGWYTRFLNREGAEIKHSDRFYMP-----NITSVEYQMGRDRH--- 236
Query: 358 LFLCRPT--GQGKSMLIVRFGTTGTSPWIKL---FPDWYFHQSASKVFEQDMGFLSSQNE 412
LF+ + S L+ T W KL F W +A + QD+ L+ Q E
Sbjct: 237 LFITSQSIPETENSTLVYTDVTYNYGIWNKLARPFVWW----TAQHIIRQDVEILAIQGE 292
Query: 413 VLLK 416
V+ K
Sbjct: 293 VIAK 296
>gi|404216972|ref|YP_006671194.1| Rieske (2Fe-2S) domain-containing dioxygenase-like protein
[Gordonia sp. KTR9]
gi|403647771|gb|AFR51011.1| Rieske (2Fe-2S) domain-containing dioxygenase-like protein
[Gordonia sp. KTR9]
Length = 369
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 114/266 (42%), Gaps = 34/266 (12%)
Query: 81 LTKCHAVTDMSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDD 140
+T +D S+A P + +A + WYP+ ++ +
Sbjct: 1 MTTTQPTSDQRSAARSRPSARRTPTYAVGTRRHLDADEIAATGLRDRWYPILPSRMLEPG 60
Query: 141 APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 200
A + + + VL++D +G +R +DRCPHR A LS GQ + R+ C YHG Q +GEG
Sbjct: 61 AMVPVRRLEVDWVLFRDAQGRVRMLEDRCPHRSAPLSVGQHLGDRIACAYHGVQVDGEGT 120
Query: 201 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW--MSQKTPPNPDKLP---------WF 249
V +P +P A R A V + EV E+ ++ + ++ + P P LP WF
Sbjct: 121 VVSVPGMPGCALEGRRATV-SLEVVEAADTIFAFLPLTADSVPTPFVLPDRLSDPAVSWF 179
Query: 250 ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT------DYSAK---REDAQ 300
NFA E ++N++DP H H + D SA+ RE +
Sbjct: 180 GNFA-----------EWAGPWRFYMDNVLDPMHGAFLHRNSHSMFGGDTSARFRIRETDR 228
Query: 301 PLGFEVTERTDRGFAGQWGREKDGSM 326
FE T++ RG W GSM
Sbjct: 229 GFFFEKTDQ--RGVNFDWVEFVRGSM 252
>gi|299530152|ref|ZP_07043578.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
gi|298721809|gb|EFI62740.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 9/167 (5%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + ++ D P+G + + +VL++ G G + +DRC HR LS G + L
Sbjct: 24 QWYVAAHSSELAD-KPVGRKLLGEAVVLFRIGDGTVAALEDRCCHRALPLSAGTVESCGL 82
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHG + EGKCV+I P KIP A V Y V+E G++W+W + P NP+ +
Sbjct: 83 RCGYHGLLYNHEGKCVEI---PGQEKIPTKAKVSAYHVQERDGLIWIWFGK--PENPEPM 137
Query: 247 ---PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P + + P + ++ + ++ +NL+D +H+ H T
Sbjct: 138 CDAPSYSVHSSPEYVYGGDVYHYNAPYQLIHDNLLDLSHLGYVHLHT 184
>gi|262279949|ref|ZP_06057734.1| Rieske protein [Acinetobacter calcoaceticus RUH2202]
gi|262260300|gb|EEY79033.1| Rieske protein [Acinetobacter calcoaceticus RUH2202]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G + +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGRVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVSEQHGAIFIWFGIDANEQPKP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 306 VTERTDRGF 314
TD GF
Sbjct: 199 T---TDNGF 204
>gi|398849602|ref|ZP_10606336.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
gi|398250670|gb|EJN35978.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
Length = 357
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++WY L++++ D PLG T+ ++ +VL++ ++ +DRC HR LS G + +
Sbjct: 23 DQWYVAALSREL-KDQPLGRTLLNKPVVLFRTADNQVAALEDRCCHRALPLSGGTVEERG 81
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
L C YHG F GKC++I P KIP A V Y V+E ++W+W P P
Sbjct: 82 LRCGYHGLLFNEGGKCIEI---PGQDKIPSKAKVPAYPVREQDQIIWIWFGSAEHPEPTF 138
Query: 246 LPWFENFARPG---FQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P + G F ++ PY ++ +NLMD +H+ H T
Sbjct: 139 APPVYDVHSSGKYLFDGDVYHYDAPY--QLIHDNLMDLSHLGYVHLHT 184
>gi|417551278|ref|ZP_12202356.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-18]
gi|417565060|ref|ZP_12215934.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC143]
gi|395556816|gb|EJG22817.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC143]
gi|400385733|gb|EJP48808.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-18]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRANGVVADVPAVH-ECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 306 VTE 308
TE
Sbjct: 199 TTE 201
>gi|374369367|ref|ZP_09627399.1| LysR family transcriptional regulator [Cupriavidus basilensis OR16]
gi|373099109|gb|EHP40198.1| LysR family transcriptional regulator [Cupriavidus basilensis OR16]
Length = 345
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY K++P + T+ +V+Y+ G + +DRC HR A LS G+ +
Sbjct: 7 WYVAGWDKEIPAEGMFSRTIIGVPVVMYRKEHGGIVALEDRCCHRGAPLSVGRREGDCIR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C+YHG +F+ GKC+ + PA +I A VR + E VW+WM +P +P
Sbjct: 67 CMYHGLKFDSAGKCI---EAPAQERIAPQAKVRKFPTVEQHRWVWIWMGDPDKADPSLIP 123
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT-----DYSAKR 296
+ P ++ + ++ ++ +NL+D +H+P H T DY+A R
Sbjct: 124 DTQWLDHPEWRSLDGYIHYDVNYLLICDNLLDFSHLPFVHPTTLGGSEDYAAVR 177
>gi|421856374|ref|ZP_16288741.1| putative Rieske iron-sulfur protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|403188313|dbj|GAB74942.1| putative Rieske iron-sulfur protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C++ Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKNYPVIEQHGAIFIWFGLDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 306 VTERTDRGFA 315
TD GF
Sbjct: 199 T---TDNGFV 205
>gi|383773856|ref|YP_005452922.1| vanillate O-demethylase oxygenase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
gi|381361980|dbj|BAL78810.1| vanillate O-demethylase oxygenase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
Length = 349
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 145/346 (41%), Gaps = 50/346 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V A L T+ + +V+Y+ G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KPALLPRTICGKHVVMYRKADGAVAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG ++ +G+C +P+ I SACVR Y V E +W+WM +P +P
Sbjct: 69 CGYHGLKYNSQGRCTF---MPSQETINPSACVRAYPVVERHRYIWLWMGDPALADPALVP 125
Query: 248 ---WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
W + A G D TIH + D+ ++L+NLMD H H S + F
Sbjct: 126 DMHWNHDPAWAG--DGKTIH-VNCDYRLVLDNLMDLTHETFVHGS---SIGNDAVAEAPF 179
Query: 305 EVTE--------RTDRG------FAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG 350
+VT R RG +A Q G+ +RFEAPC + + TG
Sbjct: 180 DVTHGEKTVTVTRWMRGIEPPPFWAKQLGKSGLVDRWQIIRFEAPCTIAIDVGVAPTGTG 239
Query: 351 --EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQSASK 398
E S G+ G + + T T + F Y + S
Sbjct: 240 APEGDRSQGV-------NGFVLNTITPETEKTCHYFWAFVRNYRIGEQRITTEIREGVSG 292
Query: 399 VFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+F +D L +Q + ++ P + +++NL +ID RK +D+
Sbjct: 293 IFREDELILEAQQRAM--DENPDR-IFYNL-NIDAGAMWSRKLIDR 334
>gi|421849246|ref|ZP_16282229.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
NBRC 101655]
gi|371460053|dbj|GAB27432.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
NBRC 101655]
Length = 338
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ L +++ +D PLG+T+ D +V+Y+ G+ ++ D CPHR LS G+ +
Sbjct: 19 WHPIALVREL-EDKPLGVTLLDAPLVIYRAGE-DIVVADDLCPHRGVPLSMGKGNGQTVA 76
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 246
C YHG+QF +G+CV+IP P D+ IP +RTY V E G++W + + N D +
Sbjct: 77 CAYHGFQFGHQGQCVRIPAHP-DSAIPSRLNLRTYPVVERYGLIWTCLRPQD--NEDISI 133
Query: 247 PWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISH-------DRTDYSAKRED 298
P ++ GFQ ++ ++ +E +D AH H D A
Sbjct: 134 PSMPHWDEAGFQQINCPWIDIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPVVPAYMPK 193
Query: 299 AQPLGFEVTERTDRG 313
P GFE R++ G
Sbjct: 194 MTPYGFEAEYRSNVG 208
>gi|217076804|ref|YP_002334520.1| oxidase-related protein [Thermosipho africanus TCF52B]
gi|419761274|ref|ZP_14287530.1| oxidase-related protein [Thermosipho africanus H17ap60334]
gi|217036657|gb|ACJ75179.1| oxidase-related protein [Thermosipho africanus TCF52B]
gi|407513580|gb|EKF48477.1| oxidase-related protein [Thermosipho africanus H17ap60334]
Length = 326
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 154/341 (45%), Gaps = 39/341 (11%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG-R 185
+WY + +K++ +G+T F +++V ++ G + C D C HR A LS G+L++ R
Sbjct: 5 QWYIVMSSKELKKGKLVGVTRFGEKLVFWRSKDGRVNCISDICCHRGASLSHGRLLENDR 64
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C +HG++++ +GK IP + ++P V+ Y E +WVW P + K
Sbjct: 65 IMCPFHGFEYDTDGKVKVIPAFGRNVEVPERYKVKKYYTYEIADFIWVWYGDGEPTHIPK 124
Query: 246 LPWFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKR-------- 296
+F++ + + + + + + Y +I EN +D H+PI H T R
Sbjct: 125 --YFDDISEEFSYSEFTQVWNVNYTRAI--ENQLDVVHVPIVHYNTIGKGNRTVVDGPIV 180
Query: 297 --EDAQPLGFEVTERTDRGFAGQWGREKDGSMPN--FLRFEAPCVLQNNRESVDNKTGEK 352
++ F V R D G + E D + + +L F+ P QN+ +K
Sbjct: 181 KWQNETMFYFYVHNRVDDGTPAKKPDEIDINDISKVYLEFKFPNFWQNH-------ILDK 233
Query: 353 HYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNE 412
T F+ P + + + +RF T I+ S +F + + +Q+
Sbjct: 234 LRVTAAFV--PIDEEHTKIYLRFYVAFTK--IRFINK--IISSIGNIFNR---IVLNQDR 284
Query: 413 VLLKEKVPTK-ELYFNLRSI--DTWVAEYRKWMD--KAGHG 448
+++ ++P K EL N + I D + EYRK + K G+G
Sbjct: 285 RVVETQIPKKTELKMNEKLILGDLPIIEYRKKREELKLGNG 325
>gi|384221115|ref|YP_005612281.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 6]
gi|354960014|dbj|BAL12693.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 6]
Length = 349
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 141/333 (42%), Gaps = 49/333 (14%)
Query: 141 APLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 200
A L T+ + +V+Y+ G + +D C HRL LS+G+L + C YHG ++ +G+
Sbjct: 22 ALLPRTICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGR 81
Query: 201 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGF 257
C +P+ I SACVR Y V E VW+WM +P +P W + A G
Sbjct: 82 CTF---MPSQETINPSACVRAYPVVERHRYVWLWMGDPALADPALVPDMHWNHDPAWAG- 137
Query: 258 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTE--------R 309
D TIH + D+ ++L+NLMD H H S + F+VT R
Sbjct: 138 -DGKTIH-VNCDYRLVLDNLMDLTHETFVHGS---SIGNDAVAEAPFDVTHGEKTVTVTR 192
Query: 310 TDRG------FAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG--EKHYSTGLFLC 361
RG +A Q G+ +RFEAPC + + TG E S G+
Sbjct: 193 WMRGIEAPPFWAKQLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGV--- 249
Query: 362 RPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQSASKVFEQDMGFLSSQN 411
G + + T T + F Y + S +F +D L +Q
Sbjct: 250 ----NGFVLNTITPETEKTCHYFWAFVRNYQIGEQRITTEIREGVSGIFHEDELILEAQQ 305
Query: 412 EVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+ ++ P + +++NL +ID RK +D+
Sbjct: 306 RAM--DENPDR-IFYNL-NIDAGAMWTRKLIDR 334
>gi|224082298|ref|XP_002306638.1| predicted protein [Populus trichocarpa]
gi|222856087|gb|EEE93634.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 144/333 (43%), Gaps = 37/333 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D+ D + + F++ VL++ G+ C ++ C HR L G + +GR+
Sbjct: 218 WYPVAFSTDLKDGTMIPIDCFEEPWVLFRGMDGKPGCVRNTCAHRACPLHLGSVNEGRVR 277
Query: 188 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW++ +GKC K+P + KI C E +G++ VW P L
Sbjct: 278 CPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCF------EQEGMILVWPGSDPPAA--TL 329
Query: 247 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + PGFQ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 330 PSLQ--PPPGFQVHAEIVMELPVEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKF 385
Query: 306 VTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQN--------NRESVDNKTGEKHYSTG 357
+T + G G W P + F PC++ + E + H
Sbjct: 386 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECATHLHQ- 437
Query: 358 LFLCRPTGQGKSMLIVRFGTTGTSPWIKLFP--DWYFHQSASKVFEQDMGFLSSQNEVLL 415
L +C P+ + K+ L+ R + +P +K P + + A +V +D+ + Q E ++
Sbjct: 438 LHVCLPSSRHKTRLLYRM-SLDFAPVLKHVPFMHYLWRHFAEQVLNEDLRLVLGQQERMI 496
Query: 416 KEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHG 448
++ S D YR W D G
Sbjct: 497 N----GANVWNWPVSYDKLGVRYRLWRDAVEKG 525
>gi|145296350|ref|YP_001139171.1| hypothetical protein cgR_2265 [Corynebacterium glutamicum R]
gi|417971133|ref|ZP_12612061.1| hypothetical protein CgS9114_08886 [Corynebacterium glutamicum
S9114]
gi|140846270|dbj|BAF55269.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044612|gb|EGV40288.1| hypothetical protein CgS9114_08886 [Corynebacterium glutamicum
S9114]
Length = 376
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI--DGR 185
WY +V P+ T+ ++ + LY+ G D C HRLA LS+G+L+ DG
Sbjct: 22 WYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVALADACWHRLAPLSKGKLVGTDG- 80
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
++C YHG ++ G+C+K +PA + SA V +Y V E+ VWVW+ T +P +
Sbjct: 81 IQCPYHGLEYNSAGRCMK---MPAQETLNPSAAVNSYPVVEAHRFVWVWLGDPTLADPTQ 137
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+P + P + ++ ++L+NLMD H H S +++ F
Sbjct: 138 VPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEFVHSS---SIGQDELSESEFV 194
Query: 306 VTERTDRGFAGQWGREKDG 324
VT D +W + D
Sbjct: 195 VTHTEDSVTVTRWMHDIDA 213
>gi|113473903|ref|YP_718166.1| putative phthalate dioxygenase [Sphingomonas sp. KA1]
gi|112821583|dbj|BAF03454.1| putative phthalate dioxygenase [Sphingomonas sp. KA1]
Length = 442
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 126 EEWYPLYLTKDV--PDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLID 183
+ W P + ++V PD PL + + + +V+++D +G + + CPHR A L+ G+ +
Sbjct: 24 QHWLPACMIEEVAEPDGTPLRVRLLGENMVVFRDSEGRIGALDELCPHRRASLAFGRNEE 83
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK----- 238
L CLYHGW+F+ G + + PADAK+ + + Y V+E+ G VWVWM
Sbjct: 84 CGLRCLYHGWKFDVNGNALDMSSEPADAKLRETMKTKAYPVREAGGFVWVWMGDTDNVLP 143
Query: 239 -TPPN 242
PPN
Sbjct: 144 FDPPN 148
>gi|239820364|ref|YP_002947549.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
gi|239805217|gb|ACS22283.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 352
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T + DD PLG + + +VLY+ +G+ +D CPHR A LS G++++G+L
Sbjct: 7 WY-VACTGNEIDDKPLGRKICGENLVLYRAAEGKATALEDFCPHRGAPLSLGRVVEGKLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GK V +P P +R++ V E G VW+W +P KL
Sbjct: 66 CGYHGLEMGCDGKTVAMPGQRVRGFPP----IRSFPVIERYGFVWIWPGDPALADPAKLH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
E P + + + D+ ++++NLMD H H T K D P
Sbjct: 122 HLEWAESPDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHS-TSIGQKEIDETP 174
>gi|92112469|ref|YP_572397.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91795559|gb|ABE57698.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 370
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 4/160 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +D P+ + D +V+Y+ G +RCPHR L++G + RL
Sbjct: 39 WY-VCARRDEVGRTPISRRLLDTDVVMYRTRDGRPVAMHNRCPHRAFPLAKGHVEGDRLV 97
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG QFE +G C LPA + +P +ACV+TY + + + W+WM + +P
Sbjct: 98 CGYHGMQFEPDGLCA---HLPAISHVPANACVQTYPIADRGPLTWIWMGDANLADEALIP 154
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
A + V+ + D+ + ENL+D H P H
Sbjct: 155 ELPWLASSEWGSVTGDFHIKADYVSMHENLIDQTHFPFLH 194
>gi|407713699|ref|YP_006834264.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
gi|407235883|gb|AFT86082.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
Length = 350
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + +V D T+ + ++LY+ GE+ DRC HR A LS G+ +
Sbjct: 7 WYVAAWSHEVEGDKLFSRTIINTPVMLYRKESGEVIALADRCCHRGAPLSLGRREGDCVR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C+YHG +F+ +G C+ + PA +IP A VR + V E +W+WM + +P +P
Sbjct: 67 CMYHGLKFDSQGACI---EAPAQERIPLHAKVRQFPVVEQHRWIWIWMGEPELADPSTIP 123
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT-----DYSAKR 296
P ++ + ++ ++ +NL+D +H+P H T DY+A R
Sbjct: 124 DTHWVDDPQWRSLPGYIHYDVNYLLICDNLLDFSHLPYVHPTTLGGGEDYAAVR 177
>gi|255319176|ref|ZP_05360393.1| rieske [2Fe-2S] domain protein [Acinetobacter radioresistens SK82]
gi|262379679|ref|ZP_06072835.1| phenylpropionate dioxygenase [Acinetobacter radioresistens SH164]
gi|255303569|gb|EET82769.1| rieske [2Fe-2S] domain protein [Acinetobacter radioresistens SK82]
gi|262299136|gb|EEY87049.1| phenylpropionate dioxygenase [Acinetobacter radioresistens SH164]
Length = 355
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C++ Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKNYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 306 VTERTDRGFA 315
TD GF
Sbjct: 199 T---TDNGFV 205
>gi|19553582|ref|NP_601584.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Corynebacterium glutamicum ATCC 13032]
gi|62391226|ref|YP_226628.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 13032]
gi|21325154|dbj|BAB99776.1| Ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenases [Corynebacterium glutamicum ATCC 13032]
gi|41326566|emb|CAF21048.1| PROBABLE VANILLATE O-DEMETHYLASE OXYGENASE SUBUNIT [Corynebacterium
glutamicum ATCC 13032]
gi|385144481|emb|CCH25520.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Corynebacterium glutamicum K051]
Length = 376
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI--DGR 185
WY +V P+ T+ ++ + LY+ G D C HRLA LS+G+L+ DG
Sbjct: 22 WYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVALADACWHRLAPLSKGKLVGTDG- 80
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
++C YHG ++ G+C+K +PA + SA V +Y V E+ VWVW+ T +P +
Sbjct: 81 IQCPYHGLEYNSAGRCMK---MPAQETLNPSAAVNSYPVVEAHRFVWVWLGDPTLADPTQ 137
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+P + P + ++ ++L+NLMD H H S +++ F
Sbjct: 138 VPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEFVHSS---SIGQDELSESEFV 194
Query: 306 VTERTDRGFAGQWGREKDG 324
VT D +W + D
Sbjct: 195 VTHTEDSVTVTRWMHDIDA 213
>gi|194740219|gb|ACF94647.1| dioxygenase [Aphanizomenon flos-aquae NH-5]
gi|195984468|gb|ACG63814.1| SxtH [Aphanizomenon sp. NH-5]
Length = 339
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 143/350 (40%), Gaps = 43/350 (12%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGKGELRCHQDRCPHRLAKLS 177
AD +WY + +D + ++ ++VL++ + ++ QD CPHR LS
Sbjct: 4 ADLILINDWYVVANGEDCKPGSITTASLLGVKLVLWRSHEQNSPIQVWQDHCPHRGVALS 63
Query: 178 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 237
G++ + L C YHGW++ GKCV+IP P D P +A +TY +E G+VWV +
Sbjct: 64 MGEIANNTLVCAYHGWRYNEAGKCVQIPAHP-DMIPPANAQAKTYHCQERYGLVWVCLG- 121
Query: 238 KTPPNP-DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAK 295
NP + +P F + P + T L + +++N +D +H P HD
Sbjct: 122 ----NPVNDIPSFPEWDDPNYHKTCTKSHLIQSSAFRVMDNFIDVSHFPFVHDGG--LGD 175
Query: 296 REDAQPLGFEVTERTDRGFAGQWGREKDGSMPNF------------LRFEAPCVLQNNRE 343
AQ FEV D G + MP F R P E
Sbjct: 176 HNHAQVEDFEVKVDKDGITMGNLQLQ----MPRFNSSIKYDLWTLWQRISHPLCQYYIAE 231
Query: 344 SVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSA--SKVFE 401
S +T + L L P + S+ VR T P I F A + E
Sbjct: 232 SSGIRTAD------LMLVTPIDEDNSL--VRMLITWNCPEISDFKTLESKLLAEFDETVE 283
Query: 402 QDMGFLSSQN----EVLLKEKVPTKELYFNLRS-IDTWVAEYRKWMDKAG 446
QD+ + SQ +LL +++ T+ L + D YR+W+ + G
Sbjct: 284 QDIRIIYSQQPARLPLLLPKQINTQWLSQEIHVPSDRCTVAYRRWLKELG 333
>gi|91782301|ref|YP_557507.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia xenovorans
LB400]
gi|91686255|gb|ABE29455.1| phthalate 4,5-dioxygenase, oxygenase subunit [Burkholderia
xenovorans LB400]
Length = 446
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 128 WYPLYLTKDVPDDA-PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
W P L+ +V D P+ L + ++++ ++D G + RCPHR A L G+ + +
Sbjct: 26 WLPAVLSHEVKADGDPVRLMLLGEKLIAFRDSSGRVGVLDHRCPHRCASLFVGRNEENGI 85
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C+YHGW+F+ +G CV +P +PA R Y+ E G++WV+M + NP L
Sbjct: 86 RCVYHGWKFDVDGNCVDMPSVPARLDFKEKVHARAYKAVERNGLIWVYMGENQ-NNPPPL 144
Query: 247 PWFENFARPGFQDVSTIHELPYDHSIL--LENLMDPAHIPISH 287
P E PG S I L + L LE +D +H+ H
Sbjct: 145 PAIEANMIPG----SKIWCLQRQCNWLQALEGDIDTSHVGFLH 183
>gi|359780082|ref|ZP_09283308.1| vanillate monooxygenase [Pseudomonas psychrotolerans L19]
gi|359371394|gb|EHK71959.1| vanillate monooxygenase [Pseudomonas psychrotolerans L19]
Length = 352
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + + +V Y+D KG++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEVQDKPLGRQICGEPLVFYRDAKGQVVALEDFCPHRGAPLSLGFVRDGTLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + GK + +P ++ VR Y E G VWVW + +P +P
Sbjct: 66 CGYHGLEMGCGGKTLGMP----GQRVGVFPAVRPYAAVERHGFVWVWPGDQAKADPTLIP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
E P + ++ + D+ ++++NLMD H H + + ++A P
Sbjct: 122 HLEWAESPDWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPP 175
>gi|347760651|ref|YP_004868212.1| vanillate O-demethylase oxygenase [Gluconacetobacter xylinus NBRC
3288]
gi|347579621|dbj|BAK83842.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
xylinus NBRC 3288]
Length = 228
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCH--QDRCPHRLAKLSEGQLID 183
E W+P+ + D+ +G+ V +IVL+++ H +DRCPHR +LS G + D
Sbjct: 9 ERWHPVSVLSDIGRGEVVGVRVEGHEIVLWREDVPGATVHAWEDRCPHRGMRLSFGFVRD 68
Query: 184 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 233
G L CLYHGWQF G +C IP P + ++P + VR Y V+E G+ WV
Sbjct: 69 GALGCLYHGWQFGGTARCRLIPAHP-NVRVPAAIQVRAYAVREQAGLAWV 117
>gi|418243964|ref|ZP_12870392.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 14067]
gi|354511995|gb|EHE84896.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 14067]
Length = 376
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLI--DGR 185
WY +V P+ T+ ++ + LY+ G D C HRLA LS+G+L+ DG
Sbjct: 22 WYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVALADACWHRLAPLSKGKLVGTDG- 80
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
++C YHG ++ G+C+K +PA + SA V +Y V E+ VWVW+ T +P +
Sbjct: 81 IQCPYHGLEYNSAGRCMK---MPAQETLNPSAAVNSYPVVEAHRFVWVWLGDPTLADPTQ 137
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
+P + P + ++ ++L+NLMD H H S +++ F
Sbjct: 138 VPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEFVHSS---SIGQDELSESEFV 194
Query: 306 VTERTDRGFAGQWGREKDG 324
VT D +W + D
Sbjct: 195 VTHTEDSVTVTRWMHDIDA 213
>gi|397735423|ref|ZP_10502121.1| rieske domain protein [Rhodococcus sp. JVH1]
gi|396928725|gb|EJI95936.1| rieske domain protein [Rhodococcus sp. JVH1]
Length = 345
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++D+ L T+ + +VLY+ G DRCPHR A LS G+L D +
Sbjct: 8 WYMAAWSQDLGVGKLLSRTIIEVPVVLYRSNDGVAHALMDRCPHRFAPLSRGELNDRGIA 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+ +G C++ P KIP+ A V Y V E + W+WM + P+ D +P
Sbjct: 68 CGYHGLEFDHDGVCIRNPH--PSGKIPKRAHVNAYPVVERDTIAWIWMGDRD-PDEDLIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ + + ++++NL+D +H H
Sbjct: 125 DYSILTKSNGVTRRDYLLMDASFDLIVDNLLDCSHTSFLH 164
>gi|395775049|ref|ZP_10455564.1| oxidoreductase subunit alpha [Streptomyces acidiscabies 84-104]
Length = 354
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+WY + + +V + LG TV + IV+Y+ + G DRC HR LS L R
Sbjct: 11 QWYVMAYSHEVGREL-LGRTVLGEPIVVYRTEADGTPVALHDRCVHRRYPLSASGLDGDR 69
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG+ ++ G CV +P ++PR+A V Y V E ++WVW+ +P
Sbjct: 70 IVCGYHGFTYDTTGTCVYVP---GQKRVPRTARVAAYPVVEQDSLIWVWIGDPALADPAA 126
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
+P + PG+ V + + D+ +L++NL+D +H
Sbjct: 127 IPRARHLDAPGWTTVRGMEPIDADYGLLVDNLLDLSH 163
>gi|124266000|ref|YP_001020004.1| vanillate O-demethylase oxygenase subunit [Methylibium
petroleiphilum PM1]
gi|124258775|gb|ABM93769.1| vanillate O-demethylase oxygenase subunit [Methylibium
petroleiphilum PM1]
Length = 331
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 19/172 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG--QLIDGR 185
WYP+ D+ PL +F + +VL++D G DRCPHR +LS G +++DGR
Sbjct: 8 WYPVATAADL-GAGPLPAALFGEDLVLWRDEAGTPHAFTDRCPHRGTRLSLGAVRVVDGR 66
Query: 186 --LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM-------S 236
LEC YHGW+F+G G+C++IP LP D R + ++E+ G++WV + +
Sbjct: 67 AQLECPYHGWRFDGGGRCLRIPALP-DFTPATGHAARAHPLREAHGLLWVVLGGDANLET 125
Query: 237 QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 288
T PD P PG V +++ ++EN +D +H H+
Sbjct: 126 VATACLPDPGP------VPGRAVVCGHYDVGTSAPRVVENFLDTSHFAFVHE 171
>gi|399021375|ref|ZP_10723485.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398092183|gb|EJL82601.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 350
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 5/160 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + ++IV Y+ +G++ +D CPHR A LS G + DG+L
Sbjct: 7 WY-VACTPDEIADKPLGRQICGEKIVFYRGAEGKVAAVEDFCPHRGAPLSLGFVRDGQLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GK + +P ++ C+R++ V E G +WVW +K +P ++
Sbjct: 66 CGYHGLEMGCDGKVISMP----GQRVRGFPCIRSFPVVERYGFIWVWPGEKELADPAQIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
E P + ++ + ++ ++++NLMD H H
Sbjct: 122 HLEWADNPEWAYGGGLYHINCEYRLMIDNLMDLTHETYVH 161
>gi|377567764|ref|ZP_09796969.1| putative iron-sulfur protein [Gordonia terrae NBRC 100016]
gi|377535034|dbj|GAB42134.1| putative iron-sulfur protein [Gordonia terrae NBRC 100016]
Length = 368
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+ WYP+ ++ + A + + + VL++D +G +R +DRCPHR A LS GQ + R
Sbjct: 45 DRWYPILPSRMLEPGAMVPVRRLEVDWVLFRDAQGRVRMLEDRCPHRSAPLSVGQHLGDR 104
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW--MSQKTPPNP 243
+ C YHG Q +GEG V +P +P A R A V + EV E+ ++ + ++ + P P
Sbjct: 105 IACAYHGVQVDGEGTVVSVPGMPGCALEGRRATV-SLEVVEAADTIFAFLPLTADSVPTP 163
Query: 244 DKLP---------WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT---- 290
LP WF NFA E ++N++DP H H +
Sbjct: 164 FVLPDRLSDPEVSWFGNFA-----------EWAGPWRFYMDNVLDPMHGAFLHRNSHSMF 212
Query: 291 --DYSAK---REDAQPLGFEVTERTDRGFAGQWGREKDGSM 326
D SA+ RE + FE T++ RG W GSM
Sbjct: 213 GGDTSARFRIRETDRGFFFEKTDQ--RGVNFDWVEFVRGSM 251
>gi|329115462|ref|ZP_08244211.1| Vanillate O-demethylase oxygenase subunit [Acetobacter pomorum
DM001]
gi|326695240|gb|EGE46932.1| Vanillate O-demethylase oxygenase subunit [Acetobacter pomorum
DM001]
Length = 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ L +++ +D PLG+T+ D +V+Y+ G+ E+ D CPHR LS G+ +
Sbjct: 32 WHPIALVREL-EDKPLGVTLLDAPLVVYRAGE-EIVVADDLCPHRGVPLSMGKGNGQTVA 89
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 246
C YHG+QF +G+CV++P P +A IP +RTY V E G++W + + N + L
Sbjct: 90 CAYHGFQFGHQGRCVRVPAHPNNA-IPSRLNLRTYPVVERYGLIWTCLRPQE--NAEISL 146
Query: 247 PWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISH-------DRTDYSAKRED 298
P ++ GFQ ++ ++ +E +D AH H D A
Sbjct: 147 PSMPHWDEAGFQHINCPWIDIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPIVPAYMPK 206
Query: 299 AQPLGFEVTERTDRG 313
P GFE R++ G
Sbjct: 207 MTPYGFEAEYRSNVG 221
>gi|299532713|ref|ZP_07046101.1| vanillate monooxygenase [Comamonas testosteroni S44]
gi|298719348|gb|EFI60317.1| vanillate monooxygenase [Comamonas testosteroni S44]
Length = 359
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++WY ++ D P+ T+ Q +VL++ G + +DRC HR LS G +
Sbjct: 18 DQWYVAGFAWELKDQ-PVARTLLGQPVVLFRTEDGRVAALEDRCCHRELPLSCGTVEAAG 76
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD- 244
L C YHG F EG+C++I P +IP ACV+++E++E ++W+WM PD
Sbjct: 77 LRCGYHGLLFSHEGRCLEI---PGQERIPAKACVKSFELRERDQILWIWMGATPDSVPDT 133
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+ P + + P ++ ++ + ++ +NL+D +H+ H +T
Sbjct: 134 EPPAYAVHSDPKYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKT 179
>gi|264677972|ref|YP_003277879.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
gi|262208485|gb|ACY32583.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
Length = 354
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 9/167 (5%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + ++ D P+G + + +VL++ G G + +DRC HR LS G + L
Sbjct: 24 QWYVAAHSSELAD-KPVGRKLLGEAVVLFRIGDGTVAALEDRCCHRALPLSAGTVESCGL 82
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHG + EGKCV+I P KIP A V Y V+E G++W+W + P NP+ +
Sbjct: 83 RCGYHGLLYNHEGKCVEI---PGQEKIPSKAKVLAYHVQERDGLIWIWFGK--PENPEPM 137
Query: 247 ---PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
P + + P + ++ + ++ +NL+D +H+ H T
Sbjct: 138 CDAPSYSVHSSPEYVYGGDVYHYNAPYQLIHDNLLDLSHLGYVHLHT 184
>gi|359457257|ref|ZP_09245820.1| Rieske (2Fe-2S) domain-containing protein [Acaryochloris sp. CCMEE
5410]
Length = 496
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 174/467 (37%), Gaps = 104/467 (22%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
++W ++WYP+ + D P +T+ + +V+++ +G+ D CPH+L +LS G++
Sbjct: 26 FNWLKQWYPVSPLSYLDDSCPTPITLLGKNLVIWQH-QGQWIAMDDVCPHKLTQLSLGKV 84
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVWM 235
DG L C HGW F+ +G+CV+ P LPA P + + V TY + QG++W+W
Sbjct: 85 QADGTLVCRQHGWCFDQKGQCVQNPMLPAQLDQPAAYHNVRSHVTTYPTQVEQGLLWIWP 144
Query: 236 SQ-----------------KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLM 278
+ KT P +K W + E+P +++ +EN
Sbjct: 145 DRNDRAFADCQQKQPATLPKTSPKWNKTDWH-------------MIEVPLGYTVSIENSF 191
Query: 279 DPAHIPISHDRTDYSAKREDAQPLGFEVTER--TDRGFA------GQWGREKDGSMPNFL 330
DP H H+ + GFE+ + GF + RE + +
Sbjct: 192 DPVHAQFLHEGIGTFSPANAIPMKGFELLGELSAEEGFVLSHKGYNTFNREMEATR---- 247
Query: 331 RFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSP-------- 382
F PC N TG F+ PT G I++F P
Sbjct: 248 TFRPPCA---NITQYYLPTGGVQTFQLYFV--PTAPGHCRYIMKFVMDLEFPARPLSLIQ 302
Query: 383 WIK-----LFPDW----YFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDT 433
W+ L P++ H K+ +QD+ + +Q + + F D
Sbjct: 303 WMNKKMLGLLPEYVQVGLQHLGTYKLNDQDITAMYAQERNEAVIDMGRRRSPFLPSPADQ 362
Query: 434 WVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHA 493
+ W+++ G G P P L A S +
Sbjct: 363 GTLTLKNWLNRFGSGGP-------------------EPNSLYAERVESRSNE-------- 395
Query: 494 PNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTA-LAILGA 539
L +R+ RH C CR +V+ W + +T +AILG
Sbjct: 396 -QLYDRWHRHTKLCPSCRRSVE----WIAEVQRMCHFMTTMMAILGG 437
>gi|375101692|ref|ZP_09747955.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora cyanea NA-134]
gi|374662424|gb|EHR62302.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora cyanea NA-134]
Length = 377
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 133/341 (39%), Gaps = 49/341 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V PL TV + L+++ +G D C HRLA LS+G+++ L+
Sbjct: 29 WYVAAWDHEVTTKKPLARTVAGVPLALWRNTEGRAVALADACWHRLAPLSKGKILGDELQ 88
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG ++ G+C +PA I SA V Y V E VWVW+ + +P +P
Sbjct: 89 CPYHGLRYNSTGRCTG---MPAQETINPSAMVPAYPVVERYRYVWVWVGEPDLADPAAVP 145
Query: 248 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P + D TIH ++ ++L+NLMD H H S +E+ F+V
Sbjct: 146 DMHQMDDPAWAGDGETIHA-DCNYQLVLDNLMDLTHEEFVHAS---SIGQEELSEAEFDV 201
Query: 307 TERTDRGFAGQWGREKDG----------SMPNF---------LRFEAPCVLQNNRESVDN 347
+ +W R+ D P F +RFEAP + +
Sbjct: 202 VHEGNTVTVTRWMRDIDAPPFWLKNMRDKFPGFEGKVDRWQIIRFEAPSTICIDVGVAKA 261
Query: 348 KTG--EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQS 395
TG E S G+ G M + T + + F Y QS
Sbjct: 262 GTGAPEGDRSQGV-------NGYVMNTITPETHRSCHYFWAFMRNYRLDSQTITTQLRQS 314
Query: 396 ASKVFEQDMGFLSSQNEVLLKEKVPTKELY-FNLRSIDTWV 435
VF +D L +Q + + P E Y N+ + WV
Sbjct: 315 VHGVFAEDEDMLRAQQSAI--DANPEHEFYSLNIDTGGMWV 353
>gi|293608939|ref|ZP_06691242.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375133843|ref|YP_004994493.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
calcoaceticus PHEA-2]
gi|292829512|gb|EFF87874.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121288|gb|ADY80811.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
calcoaceticus PHEA-2]
Length = 355
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C++ Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKNYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 306 VTERTDRGF 314
TD GF
Sbjct: 199 T---TDNGF 204
>gi|298489953|ref|YP_003720130.1| Rieske (2Fe-2S) domain-containing protein ['Nostoc azollae' 0708]
gi|298231871|gb|ADI63007.1| Rieske (2Fe-2S) iron-sulfur domain protein ['Nostoc azollae' 0708]
Length = 353
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 124/286 (43%), Gaps = 34/286 (11%)
Query: 146 TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 205
+ ++ I+L ++ G++ +D CPHR LS G+ +EC YHGW+F+ +G+CV+IP
Sbjct: 30 ILLEEPILLIRNKDGQVSAVRDICPHRAVPLSCGRFNGQEVECCYHGWRFDPKGRCVEIP 89
Query: 206 QLPADAKIPRSAC-VRTYEVKESQGVVWVWMS--QKTPPNP--DKLPWFENFARPGFQDV 260
L + S V++Y ++E+QG +W++MS K P+P +++P V
Sbjct: 90 SLLPEQNTDLSRFDVQSYPIQETQGNIWIYMSDGDKYKPSPVENEVPIVSGVIEQQPHLV 149
Query: 261 STIHELP--YDHSILLENLMDPAHIPISH-------DRTDYSAKREDAQPLGFEV----- 306
I P DH++ LMDPAH P H K D P GF V
Sbjct: 150 EVIR-FPCFIDHAV--TGLMDPAHSPYVHRVWWWRSGELHEEVKEFDPSPYGFTVRRHKL 206
Query: 307 TERTDRGFAGQWGREKDGSMPNF-LRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTG 365
+E + W G +P + F P V ++ T KH + L P
Sbjct: 207 SENMENMSRLYW--LVGGGIPEVEISFRLPGV------RIEEITFGKHRVSNLTAVTPIS 258
Query: 366 QGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQN 411
+ ++ V F G W+++F H A K QD + Q
Sbjct: 259 ETETE--VNFVLYGIPAWLRIFKP-LIHILARKFLGQDRTVVEKQQ 301
>gi|87199506|ref|YP_496763.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135187|gb|ABD25929.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ +V A + D +++Y+ G +DRCPHR A L G+ +
Sbjct: 16 WYVAALSSEVQGQALFHRKILDISVMIYRLSDGSPTALRDRCPHRFAPLHMGKREGDEIS 75
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YH +F G C P + IP A VR + + E G +W+WM ++T +PD LP
Sbjct: 76 CFYHALRFNSVGTCTHNPH--GNGNIPDGANVRAFPLLERHGFIWIWMGEQT-ADPDLLP 132
Query: 248 WFENFARPGFQDVS-TIHELPYDHSILLENLMDPAHIPISH 287
F G V T + + ++++N+MD +HI H
Sbjct: 133 DFSPLEDSGPNAVGYTYMHMDANFELIVDNVMDLSHIDHVH 173
>gi|114769251|ref|ZP_01446877.1| Rieske (2Fe-2S) protein [Rhodobacterales bacterium HTCC2255]
gi|114550168|gb|EAU53049.1| Rieske (2Fe-2S) protein [Rhodobacterales bacterium HTCC2255]
Length = 346
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
+TV +Q+I ++K G+ +D CPHR LS+G++ +EC YHG F+ GKCV
Sbjct: 23 ITVLNQKICIFKSQSGDFVALEDACPHRKLPLSKGRIKGDTVECGYHGLTFDCSGKCV-- 80
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 263
P IP +A V +Y + E G++W+WM + + +N+ P + +
Sbjct: 81 -WAPGQGNIPSNAKVHSYPLHEKYGLIWIWMGNSALADHHDIFEIKNYNDPSWGINRGDA 139
Query: 264 HELPYDHSILLENLMDPAHIPISH 287
EL ++ ++ +NL+DP H+ H
Sbjct: 140 MELECNYLLMCDNLLDPTHVAWVH 163
>gi|374368885|ref|ZP_09626927.1| Rieske (2Fe-2S) domain-containing protein [Cupriavidus basilensis
OR16]
gi|373099611|gb|EHP40690.1| Rieske (2Fe-2S) domain-containing protein [Cupriavidus basilensis
OR16]
Length = 338
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL-IDGRL 186
WY + + + + D+ P T+ + IV+++ G +DRC HR AKLS+G + DG L
Sbjct: 13 WYAV-IPESMLDNGPQPFTLLGEDIVIWRGADGTPAAVRDRCCHRTAKLSKGYVDSDGLL 71
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW ++ GKCV+IPQ+P IP +A V Y K G VWV + PD L
Sbjct: 72 CCGYHGWSYDCSGKCVRIPQMPQ-GMIPANARVANYHCKLRYGYVWVALEDPLTDIPD-L 129
Query: 247 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
P + P + + +E + +EN D AH H T K +P E
Sbjct: 130 P---EGSDPSLRRIPQFYERWQCSGLRFMENSFDNAHFSFVHKNT--FGKFTSPRPADIE 184
Query: 306 VTERTDRGFAGQWGREKDGSMP 327
+ E +WG E S+P
Sbjct: 185 IIE-------NEWGFESRRSVP 199
>gi|32967993|gb|AAP92508.1| capreomycidine hydroxylase [Streptomyces vinaceus]
Length = 343
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 7/161 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+P+ D+ + G ++ +++V+Y D +G + Q CPHR L GQL DG LE
Sbjct: 26 WFPVARVADLKNGVASG-SILGEELVVYGD-EGSVTVAQGFCPHRGVALRLGQLRDGALE 83
Query: 188 CLYHGWQFE-GEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C YHGW FE G G+C +IP LP P +A +RT+ + + G+VW + P P
Sbjct: 84 CPYHGWLFETGSGRCTRIPSLPPGRGRPHTA-LRTHPAEVAYGLVWSCLGDPFLPLPRLP 142
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ ++ R G + T++ +L EN D AH P H
Sbjct: 143 EYVDDSWRLGAGEPYTLN---CGMRLLTENFRDKAHFPFVH 180
>gi|89054066|ref|YP_509517.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88863615|gb|ABD54492.1| vanillate O-demethylase oxygenase subunit [Jannaschia sp. CCS1]
Length = 346
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
+ V ++I +++ G+L +D CPHR LS+G++ +EC YHG F G CV
Sbjct: 23 IMVLGEKICMFRTQSGDLVALEDACPHRKLPLSKGRIKGDTVECGYHGLTFNCAGTCV-- 80
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 263
P + IP +A V Y + E G++W+WM +P + EN+ P + +
Sbjct: 81 -WAPGASGIPSNARVHAYPLAEKYGLIWIWMGNPALADPSDIFEIENYGNPDWGINRGAA 139
Query: 264 HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRG-FAGQWGREK 322
EL ++ ++ +NL+DP H+ H ++ ++A+ PL VT +TD G +W +
Sbjct: 140 MELDCNYLLMCDNLLDPTHVAWVH-QSSFAAEATKDTPL--HVT-KTDTGIIVHRWMMDH 195
Query: 323 D 323
D
Sbjct: 196 D 196
>gi|374316567|ref|YP_005062995.1| ring-hydroxylating dioxygenase, large terminal subunit
[Sphaerochaeta pleomorpha str. Grapes]
gi|359352211|gb|AEV29985.1| ring-hydroxylating dioxygenase, large terminal subunit
[Sphaerochaeta pleomorpha str. Grapes]
Length = 322
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+WY + +++V A + + +VL++D +G+L C D+CPHR A LS G+L +
Sbjct: 5 QWYAILPSREVKRGALYAVKRVNLDLVLFRDAEGKLGCVVDQCPHRGAALSAGKLAGSHV 64
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAK--IPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
C +HG +F+ EG C +IP +K I R V+ Y V+E G++++W +
Sbjct: 65 RCPFHGLEFDTEGNCRRIPANGNASKEDISRYN-VKQYPVQELMGIIYLWFGESEKATAS 123
Query: 245 KLPWFEN-----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+P+F + F+ F D H +S +EN +D H+PI H T
Sbjct: 124 -VPFFHDQIDNSFSYSEFPDHWNAH-----YSRCIENQLDVVHVPIVHYNT 168
>gi|17548443|ref|NP_521783.1| vanillate O-demethylase oxygenase [Ralstonia solanacearum GMI1000]
gi|17430690|emb|CAD17373.1| probable vanillate o-demethylase oxygenase subunit oxidoreductase
protein [Ralstonia solanacearum GMI1000]
Length = 342
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + +++V Y+ +G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEIADKPLGRRICGERMVFYRGQEGKVAALEDFCPHRGAPLSLGFVRDGHLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GKC +P ++ C+R + V E G +WVW +P ++
Sbjct: 66 CGYHGLTMKADGKCASMP----GQRVGGFPCIRQFPVVERYGFIWVWPGDPEQADPARIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
E + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 HLEWAESEAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAP 175
>gi|50084184|ref|YP_045694.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp. ADP1]
gi|49530160|emb|CAG67872.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ADP1]
Length = 358
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 145/348 (41%), Gaps = 50/348 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDGHLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG EGK + +P ++ C + Y V E G +WVW +K+ N LP
Sbjct: 66 CGYHGLVMGCEGKTIAMPA----QRVGGFPCNKAYAVVEKYGFIWVWPGEKSLANEADLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPVTKVDG 181
Query: 303 GFEVTERTDRGFAGQ--WGREKDGSMPNFLRFEAPCVLQNNR------ESVDNKTGEKHY 354
VTER W G N L + P V + R +V + G H
Sbjct: 182 DHVVTERYMENIIAPPFWQMALRG---NHLADDVP-VDRWQRCHFFAPSNVHIEVGVAHA 237
Query: 355 STGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYF------------------HQSA 396
G + P + + ++V F T T WYF +
Sbjct: 238 GHGGYNA-PKDKKVASVVVDFITPETET-----SHWYFWGMARNFQPENQQLTDQIREGQ 291
Query: 397 SKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
K+F +D+ L Q + +L+ P ++L + +ID + RK +D+
Sbjct: 292 GKIFTEDLEMLEQQQQNILRN--PQRQLL--MLNIDAGGVQSRKIIDR 335
>gi|388546685|ref|ZP_10149958.1| vanillate monooxygenase [Pseudomonas sp. M47T1]
gi|388275211|gb|EIK94800.1| vanillate monooxygenase [Pseudomonas sp. M47T1]
Length = 359
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++WY L + D P+ T+ + +VL++ G+ +DRC HR LS G L
Sbjct: 25 DQWYVAALGWQLTD-KPVARTLLNTPVVLFRTSDGQAAALEDRCCHRALPLSNGTLEARG 83
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
L C YHG F GEGKC++I P KIP A V + V+E +VW+W P P
Sbjct: 84 LRCGYHGLLFNGEGKCIEI---PGQDKIPGKAQVPAFHVQERDQIVWIWFGSSQHPEPTC 140
Query: 246 LPWFENFARPG--FQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRT 290
P + G D H + PY ++ +NLMD +H+ H RT
Sbjct: 141 EPPAYDVHSSGQYLYDGDVYHYDAPY--QLIHDNLMDLSHLGYVHLRT 186
>gi|427718313|ref|YP_007066307.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 7507]
gi|427350749|gb|AFY33473.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 7507]
Length = 351
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + + + T + ++L + G++ +D CPHR LS G+ +E
Sbjct: 13 WYYALPSYQIKPGKMVSRTFLGEPVLLVRSQDGKVSALRDICPHRAVPLSCGRFDGQEVE 72
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPNPD-- 244
C YHGW+F+ G+C IP L A + S V++YE++E+QG +W++M+ P P
Sbjct: 73 CCYHGWRFDPAGRCTAIPSLVAGQETDLSRFNVKSYEIREAQGNIWIYMADPDNPQPPDS 132
Query: 245 --KLPWFENFARPGFQDVSTIHELPY-DHSILLENLMDPAHIPISHD-------RTDYSA 294
++P F Q V + + DH++ LMDPAH P H + + A
Sbjct: 133 EIEIPVIAGFEERSPQLVEVMRFPCFVDHAV--TGLMDPAHSPYVHQVWWWRSAKLNEEA 190
Query: 295 KREDAQPLGF 304
++ D P GF
Sbjct: 191 RQFDPSPYGF 200
>gi|443470962|ref|ZP_21061036.1| Vanillate O-demethylase oxygenase subunit [Pseudomonas
pseudoalcaligenes KF707]
gi|442900822|gb|ELS26865.1| Vanillate O-demethylase oxygenase subunit [Pseudomonas
pseudoalcaligenes KF707]
Length = 339
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + D P+ L ++ L++D G L +D CPHR A LS G + RL+
Sbjct: 19 WYPICPVGFIAD-RPVSLRRLGYKLALWRDTDGTLHALEDHCPHRGAPLSRGVNLGDRLQ 77
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G ++P P K+ S R + V E+ G VW++ S + L
Sbjct: 78 CPYHGVEVRCDGVTTRVPGSPG-CKLEGSQATRYFHVTEAAGAVWLYNSAQNVEEAPPLV 136
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
E P F E D+ +L+N+MDP H H ++ ++ E VT
Sbjct: 137 LPEQLTDPAFSHFLCYAEWRGDYRYVLDNVMDPMHGTYLHKQSHSMSEGESQAKF---VT 193
Query: 308 ERTDRGFAGQWGREKDGS 325
TD GF EKDG
Sbjct: 194 RDTDTGFI----FEKDGQ 207
>gi|2271500|gb|AAC27107.1| vanillate demethylase [Acinetobacter sp. ADP1]
Length = 358
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDGHLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG EGK + +P ++ C + Y V E G +WVW +K+ N LP
Sbjct: 66 CGYHGLVMGCEGKTIAMPA----QRVGGFPCNKAYAVVEKYGFIWVWPGEKSLANEADLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|398993802|ref|ZP_10696737.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398133710|gb|EJM22895.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 358
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 142 PLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 201
PL LT+ D ++VL++ G + +DRCPHR A LS G+++ ++C YHG+ F+ G C
Sbjct: 38 PLALTMLDTKVVLFRKEDGTVAALEDRCPHRWAPLSSGKVVGDAIQCGYHGFTFDATGSC 97
Query: 202 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ-----KTPPNPDKLPWFENFARPG 256
V+I P+ +IP VR Y + VWVWM + PP + P A P
Sbjct: 98 VRI---PSQTQIPSRCKVRAYTAVDKPPFVWVWMGDPEKIVEGPPVEAEWP-----ADPN 149
Query: 257 FQDVSTIHELPYDHSILLENLMDPAHIPISH 287
+ S ++ +L EN++D H H
Sbjct: 150 YSSWSGETLAHGNYMLLKENVLDLTHFGYVH 180
>gi|350567199|ref|ZP_08935784.1| Rieske (2Fe-2S) domain protein [Peptoniphilus indolicus ATCC 29427]
gi|348659611|gb|EGY76364.1| Rieske (2Fe-2S) domain protein [Peptoniphilus indolicus ATCC 29427]
Length = 276
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG- 184
+WY + + +V + +G+ +V Y+D KGE+ C D C HR A LS+G++++
Sbjct: 4 NQWYAVLSSSEVNKNQLVGVRRLGMDLVFYRDNKGEVSCLMDMCSHRGAALSKGEVVNNC 63
Query: 185 RLECLYHGWQFEGEGKCVKIPQ--LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 242
++C +HG +F GEG+C IP + + R V +++ E ++++W K
Sbjct: 64 NIQCPFHGLEFNGEGECQFIPANGINNQGDLTRYN-VSFFKLIEKHDIIYIWYGDKDKS- 121
Query: 243 PDKLPWFE----NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKR-- 296
D +P+ + +F F+D H +S +EN +D H+P H T + +
Sbjct: 122 SDDIPFHDEIDKSFVFSEFKDHWNTH-----YSRAIENQLDVVHLPFVHHNTIGAGGKTL 176
Query: 297 ---------EDAQPLGFEVTERTDRGFAGQWGREKDGSMPN-FLRFEAPCVLQNN 341
ED + + D G A + + KD + + FL+F+ P V NN
Sbjct: 177 INGPKVIVSEDKKTILTSANNEVDEGQAPK--KSKDCKIKSTFLKFKFPNVWLNN 229
>gi|323451968|gb|EGB07843.1| hypothetical protein AURANDRAFT_64390 [Aureococcus anophagefferens]
Length = 776
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 153/375 (40%), Gaps = 43/375 (11%)
Query: 107 PASEEESRGERRVADYD--WTEEWYPLYLTKDVPDDAP-LGLT-----VFDQQIVLYKDG 158
P S + + R +D W Y L + DD LG T +F + +VLYKD
Sbjct: 327 PISGDGAALRRDAPSFDDAWYAVCYDWQLERQAGDDGDELGFTPYATRLFGEPLVLYKDA 386
Query: 159 KGELRCHQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIP----QLPADAKI 213
G + C D CPHR A LS G++ DG L C YHGW F EG+ V +P P+
Sbjct: 387 SGSINCVADACPHRSAPLSMGRVGDDGNLRCFYHGWAFGAEGERVDVPGGKNSGPSKTGK 446
Query: 214 PRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSIL 273
+ + + V + G+V+VW + D LP A P V T+ + +
Sbjct: 447 KCAGSAKHFAVADVDGLVYVWRGNVLEADLDLLPRKVPDATPTHA-VDTVLDYRVGFEYI 505
Query: 274 LENLMDPAHIPISHDRT-----DYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPN 328
+EN +D H+ HD + +R++ + L + D G G+ K PN
Sbjct: 506 VENNLDSVHLFHLHDGSIPPIAALGMRRDNVKNL--LMKPFADDVGVGHVGKLKGALKPN 563
Query: 329 -FLRFEAPCVLQNNRESVDNKTGEKH------YSTGLFLCRPTGQGKSMLIVRFGTTGTS 381
+RF+AP V+++ V E H + T + L + +G +L G G +
Sbjct: 564 KLVRFDAPNVVRHG--GVSGFHEEFHIVPVAPHRTRVLLRQHLPKG-PILTTLLGVPGVN 620
Query: 382 PWI-KLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRK 440
+ KL +W +H + +D + Q ++ P D +A +
Sbjct: 621 ATLDKLVNNWNYH-----IGLEDYNVMQGQQHMIDDLGAPRINAG---GKGDDLIARFYD 672
Query: 441 WMDKA---GHGMPYY 452
W KA G PY+
Sbjct: 673 WRAKAMENDGGSPYF 687
>gi|427424381|ref|ZP_18914504.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-136]
gi|425698681|gb|EKU68314.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-136]
Length = 355
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C++ Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKNYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMRHR 198
Query: 306 VTERTDRGF 314
TD GF
Sbjct: 199 T---TDNGF 204
>gi|417544904|ref|ZP_12195990.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC032]
gi|421667444|ref|ZP_16107514.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC087]
gi|421669624|ref|ZP_16109643.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC099]
gi|400382792|gb|EJP41470.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC032]
gi|410384719|gb|EKP37225.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC087]
gi|410388009|gb|EKP40449.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC099]
Length = 358
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 146/343 (42%), Gaps = 40/343 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P +I C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRINGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPVTKVDG 181
Query: 303 GFEVTERTDRGFAGQ--WGREKDGSMPNFLRFEAPCVLQNNR------ESVDNKTGEKHY 354
+TER W G N L + P V + R +V + G H
Sbjct: 182 DHVITERYMENVIAPPFWQMALRG---NHLADDVP-VDRWQRCHFFAPSNVHIEVGVAHA 237
Query: 355 STGLFLCRPTGQGKSMLIVRFGT--TGTSPWI------KLFPDW-----YFHQSASKVFE 401
G + P + S ++V F T T TS W PD + K+F
Sbjct: 238 GHGGYHA-PKDKKVSSIVVDFITPETETSHWYFWGMARNFQPDNAELTDQIREGQGKIFT 296
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D+ L Q + +L P ++L + +ID + RK +D+
Sbjct: 297 EDLEMLEQQQQNILNN--PHRKLL--MLNIDAGGVQSRKVIDR 335
>gi|121608346|ref|YP_996153.1| vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
gi|121552986|gb|ABM57135.1| Vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
Length = 363
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 151 QIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPAD 210
+ LY+ GE ++RCPHR L++G+L+ L C YHG QF+ G CV +P +P
Sbjct: 52 DVALYRTLAGEPIAVRNRCPHRSFPLAKGKLVGDILVCGYHGMQFDPSGHCVNMPSMPI- 110
Query: 211 AKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDH 270
+P +A VRT+ V E +VW+WM + +P + P ++ V+ + D+
Sbjct: 111 --VPTNASVRTFPVVERAPLVWIWMGDPDKADEALVPGTHWLSDPLWKSVTGDFHMQSDY 168
Query: 271 SILLENLMDPAHIPISH 287
+ ENL+D H P H
Sbjct: 169 VSMHENLLDQTHFPFLH 185
>gi|399076290|ref|ZP_10751943.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398037623|gb|EJL30808.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 352
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T ++ APL V D IVL++ G+ +RCPHR A LS GQ+ +
Sbjct: 9 WYMVAWTDEL-TAAPLARRVLDMPIVLFRTATGQAAALINRCPHRFAPLSRGQVQGEMIR 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F GKCV P +P A VR++ V E +W+W Q +P +P
Sbjct: 68 CGYHGLGFSAAGKCVDS---PFGLAVPPGAEVRSFPVVERDACLWLWPGQPELADPGSIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
F P ++ V + ++ +NLMD H H
Sbjct: 125 DFGYHLDPAYRVVKGYSAVGAHFEVITDNLMDLTHTRYLH 164
>gi|260549936|ref|ZP_05824151.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
RUH2624]
gi|424056286|ref|ZP_17793807.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
nosocomialis Ab22222]
gi|425741333|ref|ZP_18859483.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-487]
gi|260406928|gb|EEX00406.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
RUH2624]
gi|407441326|gb|EKF47832.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
nosocomialis Ab22222]
gi|425492639|gb|EKU58893.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-487]
Length = 358
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 147/343 (42%), Gaps = 40/343 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRAKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPVTKVDG 181
Query: 303 GFEVTERTDRGFAGQ--WGREKDGSMPNFLRFEAPCVLQNNR------ESVDNKTGEKHY 354
+TER W G N L + P V + R +V + G H
Sbjct: 182 DHVITERYMENVIAPPFWQMALRG---NHLADDVP-VDRWQRCHFFAPSNVHIEVGVAHA 237
Query: 355 STGLFLCRPTGQGKSMLIVRFGT--TGTSPWI------KLFPDW-----YFHQSASKVFE 401
G + P+ + S ++V F T T TS W PD + K+F
Sbjct: 238 GQGGYHA-PSDKKVSSIVVDFITPETETSHWYFWGMARNFQPDNAELTDQIREGQGKIFT 296
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D+ L Q + +L P ++L + +ID + RK +D+
Sbjct: 297 EDLEMLEQQQQNILNN--PHRKLL--MLNIDAGGVQSRKVIDR 335
>gi|445427122|ref|ZP_21437781.1| Rieske [2Fe-2S] domain protein [Acinetobacter sp. WC-743]
gi|444751967|gb|ELW76661.1| Rieske [2Fe-2S] domain protein [Acinetobacter sp. WC-743]
Length = 355
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 15/191 (7%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDDQGQVHALEDRCPHRGARLSLGWNLGNR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW--MSQKTPPNP 243
+ C YHG + +G +P + + + ++CV++Y V E G +++W + K P P
Sbjct: 80 VACWYHGVEVRHDGVVEDVPAV-HECPMKGTSCVKSYPVIEQHGAIFMWFGIDAKEPAKP 138
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDYSA 294
+ P E A + + +H ++N+MDP H H DRT
Sbjct: 139 LEFP--EQLASEAWSSFLCQADWKVNHQYAIDNVMDPMHGSYLHCTSHSMAEGDRTAEMK 196
Query: 295 KREDAQPLGFE 305
R FE
Sbjct: 197 HRSTEHGFVFE 207
>gi|299771155|ref|YP_003733181.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter oleivorans DR1]
gi|298701243|gb|ADI91808.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter oleivorans DR1]
Length = 355
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
++W+P+ + +V + P+G+T + IV+++D +G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
+ C YHG + +G +P + + + + C++ Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKNYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFE 305
L + E A + + +H ++N+MDP H H T +S D E
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGSYLH-ATSHSMADGDRTA---E 194
Query: 306 VTER-TDRGFAGQWGREKDGSM 326
+ R TD GF EK+G +
Sbjct: 195 MKHRTTDNGFV----FEKEGQL 212
>gi|83746974|ref|ZP_00944020.1| Vanillate O-demethylase oxygenase subunit [Ralstonia solanacearum
UW551]
gi|207738780|ref|YP_002257173.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum IPO1609]
gi|83726394|gb|EAP73526.1| Vanillate O-demethylase oxygenase subunit [Ralstonia solanacearum
UW551]
gi|206592148|emb|CAQ59054.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum IPO1609]
Length = 342
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + +++V Y+ +G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEIADKPLGRRICGERMVFYRGPEGKMAALEDFCPHRGAPLSLGFVRDGHLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GKC +P ++ C+R + V E G +WVW +P ++
Sbjct: 66 CGYHGLTMKADGKCASMP----GQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
E + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAP 175
>gi|411003190|ref|ZP_11379519.1| oxygenase Rieske iron-sulfur component [Streptomyces globisporus
C-1027]
Length = 379
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR-L 186
WYP+ L++ V + ++I LY+ G + +DRC HR LS G ++DG L
Sbjct: 37 WYPVALSRSVRKEGVAAAVFAGERIALYRARSGAVHALEDRCAHRQVPLSMG-VVDGETL 95
Query: 187 ECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YH W + G+G+ +IP L DA+ PR VR Y V+E+ G+V+V+ P +P+K
Sbjct: 96 RCCYHAWAYRGDGRISQIPYLAKGDARPPRG--VRAYPVREAYGLVFVF-----PGDPEK 148
Query: 246 -----LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
LP FA P ++ ++ + +S L ENL+D H
Sbjct: 149 AAVTPLPDVPAFASPRYRTMTFSRTVRCHYSFLHENLLDMNH 190
>gi|148554471|ref|YP_001262053.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499661|gb|ABQ67915.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 367
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+EWY T +V L T+ D++IV Y+ GE DRC HR LS G L
Sbjct: 29 DEWYVAAFTDEV-GRTLLRRTILDRRIVFYRTEAGEAVALADRCAHRSYPLSAGLLDGDT 87
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD- 244
+ C YHG++++ G C+++P AK PRS V+ + + E +VW+WM + PD
Sbjct: 88 IVCGYHGFRYDVAGDCIEVPSA---AKCPRSIGVKRFPLVEQGDLVWIWMGEGDATEPDL 144
Query: 245 -KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
KLP + P ++ L ENL+D H+ H ++
Sbjct: 145 HKLPVVSFLTSDDWTRSKGYFHHPGNYVSLHENLLDLTHLSYVHAKS 191
>gi|294023802|ref|YP_003547121.1| vanillate O-demethylase oxygenase subunit VanA [Sphingobium
japonicum UT26S]
gi|292677582|dbj|BAI99098.1| vanillate O-demethylase oxygenase subunit VanA [Sphingobium
japonicum UT26S]
Length = 309
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 166 QDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVK 225
+D CPHR A LS+G++I +L+C YHG +F G+CV P D +P++A RTY V
Sbjct: 3 RDMCPHRFAPLSKGKIISDQLQCPYHGLRFNSNGQCVFNPH--GDGVVPKAAVTRTYPVL 60
Query: 226 ESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST-IHELPYDHSILLENLMDPAHIP 284
E G+VWVWM QK +P KLP F+ + V IH Y + + +N++D H
Sbjct: 61 EKFGLVWVWMGQKA-ADPAKLPNFDFMDDTRWTYVKGHIHGSGY-YELFTDNILDLGHAA 118
Query: 285 ISH 287
H
Sbjct: 119 FLH 121
>gi|239814712|ref|YP_002943622.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239801289|gb|ACS18356.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 225
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 6/132 (4%)
Query: 128 WYPLYLTKDV-PDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
W+P+ + ++ P + Q++ L++ G + ++RCPHR + + GQ++ RL
Sbjct: 9 WHPVARSAELRPGANIVAGFAEGQELALWRAASGAAQAWENRCPHRSVRFTLGQVLQDRL 68
Query: 187 ECLYHGWQFE-GEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP-- 243
C YHGWQ++ G G+C IP P PR+ C + + E+ G++WV ++ +TPP+P
Sbjct: 69 ACAYHGWQYDAGNGQCASIPAHP-GMPAPRNVCAKVFHAAEAAGMLWVSLAAETPPSPPP 127
Query: 244 -DKLPWFENFAR 254
D +P +F R
Sbjct: 128 GDAVPAGWSFCR 139
>gi|163795088|ref|ZP_02189056.1| oxidase-related protein [alpha proteobacterium BAL199]
gi|159179486|gb|EDP64015.1| oxidase-related protein [alpha proteobacterium BAL199]
Length = 357
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 129/307 (42%), Gaps = 37/307 (12%)
Query: 146 TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 205
T+ + ++ +D G + +D CPHR LS+G+ G +EC YHGW+F +G+C IP
Sbjct: 39 TLLGEPVLFGRDDSGAVFAMRDICPHRGIPLSDGRFDQGEVECCYHGWRFATDGRCTAIP 98
Query: 206 QLPADAKIPRSAC-VRTYEVKESQGVVWVWM------SQKTPPNPDKLPWFENFARPGFQ 258
L D + VRTY V + G +WV+M + + +P LP N Q
Sbjct: 99 SLTVDQTMDVDKIRVRTYPVVDRHGAIWVYMPADPRSTAEPAVSPPVLPEVTNRGPGMVQ 158
Query: 259 DVSTIHELPYDHSILLENLMDPAHIPISHD----RTDYS----AKREDAQPLGFEVTERT 310
+S + DH+++ LMDPAH P H R+ S AKR LGF +
Sbjct: 159 RMSFPCHI--DHAVI--GLMDPAHGPFVHTSWWWRSRKSIHEKAKRFGPVDLGFAMLRHQ 214
Query: 311 DRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSM 370
+ + R G+ +RF P + V++ +H GL P +
Sbjct: 215 PSSNSAAY-RLLGGAPTTEIRFHLPGI------RVEDIEIGRHRVCGLTAVTPIDATTTE 267
Query: 371 L-IVRFGTTGTSPWIKL-------FPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTK 422
+ + F + PW+ + F + Q V Q G + + +L+ +
Sbjct: 268 IHQLMFWSI---PWLSILKPVLAPFVRRFLAQDRDVVVRQQRGLVHNPTLMLINDSDVQA 324
Query: 423 ELYFNLR 429
+ YF L+
Sbjct: 325 KWYFRLK 331
>gi|383642875|ref|ZP_09955281.1| oxygenase Rieske iron-sulfur component [Streptomyces chartreusis
NRRL 12338]
Length = 388
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 7/186 (3%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+ WYP+ L++ V + L T ++I L++ G++ +DRC HR LS G +
Sbjct: 35 DHWYPVALSRRVRAERVLATTFAGERIALFRGKSGDVHALEDRCAHRQVPLSMGVVEGET 94
Query: 186 LECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
L C YH W + G+G+ +IP L D + PR VR Y V+E+ G+V+V+
Sbjct: 95 LRCRYHAWAYRGDGRISQIPYLAKGDRRPPRG--VRGYPVREAYGLVFVFPGDPQRAAAT 152
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
LP F P ++ ++ + +S + ENL+D H + R + LG+
Sbjct: 153 PLPHLPAFGSPRYRTMTYSRTVRCHYSFMHENLLDMNHQFLHRG----VVGRLHPELLGY 208
Query: 305 EVTERT 310
E ER+
Sbjct: 209 EADERS 214
>gi|347529646|ref|YP_004836394.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345138328|dbj|BAK67937.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 350
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +D+ D P +T+ ++IV+++ G + +DRC HRLA LS G+ RL
Sbjct: 8 WYVAGWAQDLKADTPFAITILGERIVIWRTASGAIHALEDRCVHRLAPLSLGRCEGERLR 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C+YHG F+ +G+ V ++P +IP A VR Y V +WVWM + +P
Sbjct: 68 CMYHGLLFDPDGRVV---EMPGQDRIPPQARVRHYPVVARHSWLWVWMGDPARADESLIP 124
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
P + + + ++ +NL+D +H+ H
Sbjct: 125 PAVGLDHPDYILGHGQLDYAAEARLINDNLLDFSHLTFVH 164
>gi|405355684|ref|ZP_11024859.1| iron-sulfur cluster-binding protein, Rieske family [Chondromyces
apiculatus DSM 436]
gi|397091391|gb|EJJ22209.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 366
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 129/322 (40%), Gaps = 63/322 (19%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ L + ++ D PL T+ +VL++ G+ DRCPHR LS G++ +G+L+
Sbjct: 29 WFILCASSEL-GDKPLARTLQGSPLVLFRGEGGKPATLVDRCPHRNVPLSLGRVKEGQLQ 87
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW+F+G G+C IP + R+ C + +E G VWV+ + P P +
Sbjct: 88 CGYHGWRFDGAGQCRAIPGFLGEPGA-RARCATAHATREQDGFVWVYSTPGVEPTTEPYR 146
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD---RTD----------- 291
P E AR + V + P LEN +D H H RT+
Sbjct: 147 FPLLE--ARE-YSTVRRMLRAPGSLHATLENTLDVPHTAYLHGGLFRTEEKRNEIEVVVR 203
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGE 351
SA + +A+ +G E G G+ G + +F RF P + Q V+ + G+
Sbjct: 204 RSADKVEAEYIG----EPRPSGLVGKLLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGD 254
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKL----------FPDWYFHQS------ 395
S ++V T S W L P W +
Sbjct: 255 ----------------TSHIMVTSAMTPVSEWDTLVFAVVTFRLPLPRWLVRAALPLIMP 298
Query: 396 -ASKVFEQDMGFLSSQNEVLLK 416
A +F QD L Q E + +
Sbjct: 299 VALHIFGQDARILKKQTETIRR 320
>gi|357030373|ref|ZP_09092317.1| hypothetical protein GMO_00170 [Gluconobacter morbifer G707]
gi|356415067|gb|EHH68710.1| hypothetical protein GMO_00170 [Gluconobacter morbifer G707]
Length = 203
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
+W+PL L DVP + +I L++ G++ +DRCPHR +LS G + DG L
Sbjct: 3 DWFPLALCVDVPSGTAAPARLRGAEIALWRGPDGQIHAWEDRCPHRGMRLSFGFVRDGNL 62
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
CLYHGWQF + C IP P + ++P + Y+V+E G+VWV S + +L
Sbjct: 63 ACLYHGWQFGADAACRHIPAHP-ELRVPGTIRATAYKVEERAGMVWV--SLDGDADAAEL 119
Query: 247 PWFENFARPGFQDVSTIHELPYD 269
P + GF S + ++P D
Sbjct: 120 P-----DQSGFGARSLLVQVPVD 137
>gi|374984177|ref|YP_004959672.1| putative dioxygenase [Streptomyces bingchenggensis BCW-1]
gi|297154829|gb|ADI04541.1| putative dioxygenase [Streptomyces bingchenggensis BCW-1]
Length = 450
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 128 WYPLYLTKDVPDDAPL-GLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRL 186
W P+ L++++ PL V Q +VL++D G L CPHR A LS G+L DG L
Sbjct: 26 WQPIALSEELDGIRPLVAPKVMGQDLVLFRDDGGRLGLVDRGCPHRGADLSLGRLEDGGL 85
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
C +HGW F +G C+ P P + + + +Y V+E G++W ++ PP +L
Sbjct: 86 RCCFHGWLFGRDGSCLDTPAEPVGSTLASRVTLGSYPVRERNGIIWGYLGPGEPP---EL 142
Query: 247 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
P + F P + + L + LE +DPAH H
Sbjct: 143 PALDCFRAPADRAFAWKGLLECNWLQALEVGIDPAHASYLH 183
>gi|399908238|ref|ZP_10776790.1| Rieske (2Fe-2S) protein [Halomonas sp. KM-1]
Length = 343
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 10/190 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + +V + P+G+T + + L++D G + +DRCPHR A+LS+G + RL
Sbjct: 23 WYPVLASWEVGSN-PVGITRLGENLALWRDHDGMVHAIEDRCPHRGARLSKGWNLGDRLA 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS---QKTPPNPD 244
C YHG + GEG +P + ++ + +ACVR Y V+E+QG ++V+ + PP +
Sbjct: 82 CWYHGVEVNGEGTVCDVPAI-GNSPMVGTACVRHYPVQEAQGAIFVFFGTTPDEAPPALE 140
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
+ A G + + Y +++ +N+MDP H H + A+ + +
Sbjct: 141 LPEQLTDEASYGHFLCTATWKCNYQYAV--DNVMDPMHGTYLHADSHSMAEGDRQAEM-- 196
Query: 305 EVTERTDRGF 314
V E T GF
Sbjct: 197 -VLEPTQTGF 205
>gi|421696591|ref|ZP_16136173.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-692]
gi|404561352|gb|EKA66587.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-692]
Length = 358
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 147/343 (42%), Gaps = 40/343 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPVTKVDG 181
Query: 303 GFEVTERTDRGFAGQ--WGREKDGSMPNFLRFEAPCVLQNNR------ESVDNKTGEKHY 354
+TER W G N L + P V + R +V + G H
Sbjct: 182 DHVITERYMENVIAPPFWQMALRG---NHLADDVP-VDRWQRCHFFAPSNVHIEVGVAHA 237
Query: 355 STGLFLCRPTGQGKSMLIVRFGT--TGTSPWI------KLFPDW-----YFHQSASKVFE 401
G + P + S ++V F T T TS W PD + K+F
Sbjct: 238 GHGGYHA-PKDKKVSSIVVDFITPETETSHWYFWGMARNFQPDNAELTDQIREGQGKIFT 296
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D+ L Q++ +L P ++L + +ID + RK +D+
Sbjct: 297 EDLEMLEQQHQNILNN--PHRKLL--MLNIDAGGVQSRKVIDR 335
>gi|374367149|ref|ZP_09625217.1| vanillate O-demethylase oxygenase [Cupriavidus basilensis OR16]
gi|373101343|gb|EHP42396.1| vanillate O-demethylase oxygenase [Cupriavidus basilensis OR16]
Length = 348
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 141/350 (40%), Gaps = 54/350 (15%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D PLG T+ ++++VL++ G + +D CPHR A LS G + DG+L
Sbjct: 7 WY-VACTPDELAGKPLGRTICNEKMVLFRGEDGNVAALEDFCPHRGAPLSLGFVRDGQLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GKC ++ A ++ +R+Y E G VW W + +P
Sbjct: 66 CGYHGMTMGRDGKCARM----AGQRVGGFPSIRSYPAVERYGFVWAWPGDAALADAATIP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
E + ++ + D+ ++++NLMD H H + A+ E++ P
Sbjct: 122 HLEWAVSADWAHGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQAEIEESAP------ 175
Query: 308 ERTDRGFAGQWGREKDGSMP----------NFLRFEAPC-VLQNNR----ESVDNKTGEK 352
G GR +G MP N L + PC Q R V + G
Sbjct: 176 ATKVEGDMVVTGRHMEGIMPPPFWAAALRGNGLADDVPCDRWQICRFTPPSHVMIEVGVA 235
Query: 353 HYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYF------------------HQ 394
H G + P + S ++V F T T I WYF
Sbjct: 236 HAGKGGYHAEPQHKASS-IVVDFITPETETSI-----WYFWGMARNFKADDAQLTETIRD 289
Query: 395 SASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
K+F +D+ L +Q +L P ++L +ID + R+ +D+
Sbjct: 290 GQGKIFAEDLEMLEAQQRNILAN--PERKLL--KLNIDAGGVQARRILDR 335
>gi|386335217|ref|YP_006031387.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum Po82]
gi|334197667|gb|AEG70851.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum Po82]
Length = 342
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + +++V Y+ +G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEIADKPLGRRICGERMVFYRGPEGKVAALEDFCPHRGAPLSLGFVRDGHLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GKC +P ++ C+R + V E G +WVW +P ++
Sbjct: 66 CGYHGLTMKADGKCASMP----GQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPARIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
E + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAP 175
>gi|148554460|ref|YP_001262042.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499650|gb|ABQ67904.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 423
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGK-GELRCHQDRCPHRLAKLSEGQLIDGRL 186
WY L +V D L + + ++L++D + G D CPHR A LS G+ +DG +
Sbjct: 88 WYVAALAGEVEADL-LRRLILGEPVLLFRDEQSGAPSALHDLCPHRFAPLSRGKRVDGGI 146
Query: 187 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 246
+C YHG F GKCV P + +I +A VR + V E G++W+WM + +P ++
Sbjct: 147 QCGYHGLVFAPSGKCVLNPH--GNGRILPTAAVRAFPVIERHGMIWIWMGEHDLADPSRI 204
Query: 247 PWFENFARPGFQDVSTIHELP--YDHSILLENLMDPAHIPISHDRTD 291
P F ++ Q LP ++ +L +N++D +H H D
Sbjct: 205 PDF-SYLDAADQRTRGAGYLPTRANYQLLTDNILDASHADYLHALLD 250
>gi|291445392|ref|ZP_06584782.1| vanillate O-demethylase oxygenase subunit [Streptomyces roseosporus
NRRL 15998]
gi|291348339|gb|EFE75243.1| vanillate O-demethylase oxygenase subunit [Streptomyces roseosporus
NRRL 15998]
Length = 374
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR-L 186
WYP+ L++ V + ++I LY+ G + +DRC HR LS G ++DG L
Sbjct: 48 WYPVALSRSVRKEGVAAAVFAGERIALYRAKSGAVHALEDRCAHRQVPLSMG-VVDGETL 106
Query: 187 ECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YH W + G+G+ +IP L DA+ PR VR Y V+E+ G+V+V+ P +P+K
Sbjct: 107 RCCYHAWAYRGDGRISQIPYLAKGDARPPRG--VRAYPVREAYGLVFVF-----PGDPEK 159
Query: 246 -----LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
LP +A P ++ ++ + +S L ENL+D H
Sbjct: 160 AEVTPLPDVPAYASPRYRTMTFSRTVRCHYSFLHENLLDMNH 201
>gi|372281889|ref|ZP_09517925.1| Ring-hydroxylating dioxygenase, large terminal subunit [Oceanicola
sp. S124]
Length = 349
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 150/335 (44%), Gaps = 33/335 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR-- 185
W+P+ L D D P+ + + Q++VL + G+ ++ D C H A+LS G++++
Sbjct: 27 WHPV-LASDSLTDRPVAVELLGQRLVLARMGQS-VQAFPDTCAHFQARLSLGKVVEVNGQ 84
Query: 186 --LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 243
L+C YHGW F G+C +IPQLP +IP +A + + +E+ G+VWV +++ +
Sbjct: 85 PALQCPYHGWAFAAGGRCARIPQLPEGRRIPAAADLTAHLAREACGLVWVCLAEAATHD- 143
Query: 244 DKLPWFENFARPGFQDV--STIHELPYDHSILLENLMDPAHIPISHDRT----------D 291
LP F F P F+ + + E+ + ++ +D H P H+ +
Sbjct: 144 --LPPFPEFDDPTFRKIRLNEAEEMATSSTRMIMGTLDDTHFPWVHEGIFGSQDHPEPPE 201
Query: 292 YSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGE 351
++ RED Q ++ T++ G +G++ LR+ + N V + G
Sbjct: 202 HAVWREDNQ---LVLSYETEQPAGLMTGGGTEGAV--RLRYTNYVGMPNVIRLVKDSPGG 256
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQN 411
+ Y L C + T P D + + A+ V +QD + SQ
Sbjct: 257 R-YVIWLATCPLDWNRTRNFWIFARDYDTDP----DRDVTYTEMAAHVRQQDKPVIESQR 311
Query: 412 EVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAG 446
LL EL +R D + +Y+KW+++ G
Sbjct: 312 PWLLPPFWSQVEL--PIRPGDLPLIQYQKWLEELG 344
>gi|254451458|ref|ZP_05064895.1| vanillate O-demethylase oxygenase subunit [Octadecabacter arcticus
238]
gi|198265864|gb|EDY90134.1| vanillate O-demethylase oxygenase subunit [Octadecabacter arcticus
238]
Length = 346
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 145 LTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 204
+TV + + +++ GEL +D CPHR LS+G++ +EC YHG F+ G+CV
Sbjct: 23 ITVLGENVCVFRSEAGELVGLEDACPHRKLPLSKGRIKGDTVECGYHGLTFDCAGQCV-- 80
Query: 205 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGF-QDVSTI 263
P +IP +A V Y + E G+VW+WM + + + EN+ P + +
Sbjct: 81 -WAPGTGRIPSNARVHAYPLHEKYGLVWIWMGNPALADVNDIFDIENYGDPAWGMNRGDA 139
Query: 264 HELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQ 317
EL ++ ++ +NL+DP H+ H ++ ++ PL +TD G Q
Sbjct: 140 MELDCNYLLMCDNLLDPTHVAWVH-QSSFATDATKDTPLR---VSKTDNGVIVQ 189
>gi|407713704|ref|YP_006834269.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235888|gb|AFT86087.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 347
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY D+ D + T+ + ++LY+ G +RCPHR A LS G +
Sbjct: 8 WYCAGWGADLGQDDLIDRTILKESVLLYRKQNGLAVAIGNRCPHRFAPLSSGCKKGDNVA 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F G+CV P D P++A V Y + E +W+WM + D++P
Sbjct: 68 CPYHGLTFGPSGECVLNPH--GDGTTPKAARVTRYPLVERYDALWIWMGDPELADADEIP 125
Query: 248 WF-ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
F E+ R G+ + E+P + +L +NL+D +H+P H
Sbjct: 126 DFSESSLREGWGHIRGHLEVPVHYELLTDNLLDLSHVPYLH 166
>gi|160896413|ref|YP_001561995.1| Rieske (2Fe-2S) domain-containing protein [Delftia acidovorans
SPH-1]
gi|333917152|ref|YP_004490884.1| Rieske (2Fe-2S) domain-containing protein [Delftia sp. Cs1-4]
gi|160361997|gb|ABX33610.1| Rieske (2Fe-2S) domain protein [Delftia acidovorans SPH-1]
gi|333747352|gb|AEF92529.1| Rieske (2Fe-2S) iron-sulfur domain protein [Delftia sp. Cs1-4]
Length = 341
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 5/187 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + D P+ + F ++I L++D G++ +D CPHR A LS+G ++ RL
Sbjct: 23 WYAV-CPSDFVKTQPVSVRRFGRKIALWRDAAGQVHALEDHCPHRGAPLSQGVILGDRLA 81
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + G+G K+P P K+ S + +E+ G ++++ S K +
Sbjct: 82 CPYHGVEVRGDGTVTKVPGSPG-CKLEGSRAALAFHAREAHGAIFLYNSDKAVDEAPEFT 140
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
E P + + E D+ L+N+MDP H H ++ +S D++ F+V
Sbjct: 141 LPEELTSPEYSNFLCYAEWRSDYRYALDNVMDPMHGTFLHKQS-HSMAEGDSKAT-FQVR 198
Query: 308 ERTDRGF 314
E TD GF
Sbjct: 199 E-TDDGF 204
>gi|91782291|ref|YP_557497.1| vanillate O-demethylase oxygenase [Burkholderia xenovorans LB400]
gi|91686245|gb|ABE29445.1| Vanillate O-demethylase oxygenase subunit [Burkholderia xenovorans
LB400]
Length = 345
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + DV L T ++ +VL++ G L DRC HR LSEG + +
Sbjct: 7 WYVAAFSADVKPGKCLARTFLNEPVVLFRTASGSLGALIDRCSHRAMPLSEGHVDGDIIR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F G C I P +IP +A VR+Y V E G++W+WM + + +
Sbjct: 67 CPYHGLEFNAAGVCAHI---PGQERIPAAANVRSYPVSERDGLIWIWMGEPEKADLRSIM 123
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
PG+ + + +L++N++D H+ H T
Sbjct: 124 SNPEHRDPGWSWRPYYMHVNSNWQLLVDNILDLTHVAYIHANT 166
>gi|421652401|ref|ZP_16092760.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC0162]
gi|425747423|ref|ZP_18865431.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-348]
gi|445457815|ref|ZP_21446730.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC047]
gi|408505527|gb|EKK07248.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC0162]
gi|425493997|gb|EKU60219.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-348]
gi|444775995|gb|ELX00047.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC047]
Length = 358
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|421896325|ref|ZP_16326722.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum MolK2]
gi|206587490|emb|CAQ18072.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum MolK2]
Length = 342
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + +++V Y+ +G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEIADKPLGRRICGERMVFYRGPEGKVAALEDFCPHRGAPLSLGFVRDGHLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GKC +P ++ C+R + V E G +WVW +P ++
Sbjct: 66 CGYHGLTMKADGKCASMP----GQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
E + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAP 175
>gi|126641164|ref|YP_001084148.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 17978]
Length = 358
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 146/343 (42%), Gaps = 40/343 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPVTKVEG 181
Query: 303 GFEVTERTDRGFAGQ--WGREKDGSMPNFLRFEAPCVLQNNR------ESVDNKTGEKHY 354
+TER W G N L + P V + R +V + G H
Sbjct: 182 DHVITERYMENVIAPPFWQMALRG---NHLADDVP-VDRWQRCHFFAPSNVHIEVGVAHA 237
Query: 355 STGLFLCRPTGQGKSMLIVRFGT--TGTSPWI------KLFPDW-----YFHQSASKVFE 401
G + P + S ++V F T T TS W PD + K+F
Sbjct: 238 GHGGYHA-PKDKKVSSIVVDFITPETETSHWYFWGMARNFQPDNAELTDQIREGQGKIFT 296
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D+ L Q + +L P ++L + +ID + RK +D+
Sbjct: 297 EDLEMLEQQQQNILNN--PHRKLL--MLNIDAGGVQSRKVIDR 335
>gi|417551548|ref|ZP_12202626.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-18]
gi|417552026|ref|ZP_12203096.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-81]
gi|417562953|ref|ZP_12213832.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC137]
gi|417564000|ref|ZP_12214874.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC143]
gi|421199265|ref|ZP_15656429.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC109]
gi|421454954|ref|ZP_15904301.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-123]
gi|421633387|ref|ZP_16074022.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-13]
gi|421654322|ref|ZP_16094652.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-72]
gi|421661633|ref|ZP_16101806.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC110]
gi|421804713|ref|ZP_16240616.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-A-694]
gi|445434199|ref|ZP_21439892.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC021]
gi|395525535|gb|EJG13624.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC137]
gi|395555756|gb|EJG21757.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC143]
gi|395565232|gb|EJG26880.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC109]
gi|400212744|gb|EJO43703.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-123]
gi|400386003|gb|EJP49078.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-18]
gi|400392285|gb|EJP59331.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-81]
gi|408511089|gb|EKK12743.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-72]
gi|408706618|gb|EKL51925.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-13]
gi|408715639|gb|EKL60764.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC110]
gi|410410730|gb|EKP62622.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-A-694]
gi|444756604|gb|ELW81144.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC021]
Length = 358
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 146/343 (42%), Gaps = 40/343 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPVTKVDG 181
Query: 303 GFEVTERTDRGFAGQ--WGREKDGSMPNFLRFEAPCVLQNNR------ESVDNKTGEKHY 354
+TER W G N L + P V + R +V + G H
Sbjct: 182 DHVITERYMENVIAPPFWQMALRG---NHLADDVP-VDRWQRCHFFAPSNVHIEVGVAHA 237
Query: 355 STGLFLCRPTGQGKSMLIVRFGT--TGTSPWI------KLFPDW-----YFHQSASKVFE 401
G + P + S ++V F T T TS W PD + K+F
Sbjct: 238 GHGGYHA-PKDKKVSSIVVDFITPETETSHWYFWGMARNFQPDNAELTDQIREGQGKIFT 296
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D+ L Q + +L P ++L + +ID + RK +D+
Sbjct: 297 EDLEMLEQQQQNILNN--PHRKLL--MLNIDAGGVQSRKVIDR 335
>gi|114050057|emb|CAK51082.1| putative vanillate O-demethylase oxygenase subunit A [Streptomyces
ambofaciens]
Length = 362
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 134/341 (39%), Gaps = 49/341 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V PL TV + L++ +G D C HRLA LS+G+++ L+
Sbjct: 29 WYVAAWDHEVTGKQPLARTVAGIPLALWRTTEGRAIALADACWHRLAPLSKGRILGDELQ 88
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG ++ G+C +PA I SA V +Y V E VWVW+ +P +P
Sbjct: 89 CPYHGLRYNATGRCTG---MPAQETINPSAVVPSYPVVERYRYVWVWVGDPDLADPATVP 145
Query: 248 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P + D TIH ++ ++L+NLMD H H S +E+ F+V
Sbjct: 146 DMHQMDDPTWAGDGETIHA-DCNYQLILDNLMDLTHEEFVHSS---SIGQEELSEAEFDV 201
Query: 307 TERTDRGFAGQWGREKDG----------SMPNF---------LRFEAPCVLQNNRESVDN 347
T + +W R+ D P F + FEAP ++ +
Sbjct: 202 THEGNTVTVTRWMRDIDAPPFWLKNMRDKFPGFSGKVDRWQIITFEAPGTIRIDVGVAKA 261
Query: 348 KTG--EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQS 395
TG E + G+ G M + T TS + F Y Q+
Sbjct: 262 GTGAPEGDRTQGV-------NGYVMNTITPETDRTSHYFWAFMRNYRLDSQTITTQLRQA 314
Query: 396 ASKVFEQDMGFLSSQNEVLLKEKVPTKELY-FNLRSIDTWV 435
VF +D L +Q + + P E Y N+ + WV
Sbjct: 315 VHGVFGEDEEMLCAQQRAI--DANPEHEFYSLNIDAGGMWV 353
>gi|392950448|ref|ZP_10316003.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|392950635|ref|ZP_10316190.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|391859410|gb|EIT69938.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|391859597|gb|EIT70125.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
Length = 359
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L+ ++ + T+ D +V+Y+ G DRCPHR + LS G +
Sbjct: 11 WYVAALSSELESEKLFARTLLDTPVVMYRQRDGAAVALHDRCPHRFSPLSMGHRDGDNVV 70
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F G+CV P + IP +A VRT+ + E G +W+WM + P + LP
Sbjct: 71 CPYHGLRFNTAGQCVHNPH--GNGAIPAAAKVRTFPLIERYGFIWIWMGE-VPADASALP 127
Query: 248 WFENFARPGFQDVS-TIHELPYDHSILLENLMDPAHI 283
+ R V+ T P + ++ +N+MD +H+
Sbjct: 128 DYGPIDRGHPNGVAHTYMRRPCHYELITDNVMDLSHV 164
>gi|289767753|ref|ZP_06527131.1| oxidoreductase alpha subunit [Streptomyces lividans TK24]
gi|289697952|gb|EFD65381.1| oxidoreductase alpha subunit [Streptomyces lividans TK24]
Length = 356
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 144/338 (42%), Gaps = 54/338 (15%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGKGELRCHQDRCPHRLAKLSEG--QLI 182
+WY + +V + LG TV + +VLY+ + G + H DRC HR LSE +L
Sbjct: 8 QWYVAAYSHEVGREL-LGRTVLGEPLVLYRAEEDGGPVVLH-DRCVHRRYPLSEAPTRLD 65
Query: 183 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 242
R+ C YHG+ ++ G CV +P ++PR+A V +Y V E +VWVW+ +
Sbjct: 66 GDRIVCGYHGFTYDTTGTCVYVP---GQKRVPRTARVASYPVAERDSLVWVWIGDPALAD 122
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ-P 301
P+ +P + PG+ V + + D+ +L++NL+D +H H + E A+ P
Sbjct: 123 PEAVPRARHLDAPGWVTVRGMEPIDADYGLLVDNLLDLSHETYLH--GGHIGTPEVAETP 180
Query: 302 LGFEVTE-----RTDR---------------GFAGQWGREKDGSMPNFLRFEAPCVL--- 338
+ EV E R R G G+ R +D + + APC+
Sbjct: 181 ITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIVGRIDRWQD------IEYHAPCLYVLH 234
Query: 339 -----QNNRESVDNKTGEKHYSTGLFLCRPTGQGKSM---LIVRFGTTGTSPWIKLFPDW 390
+ D E ++ + P+G GK + R T + +
Sbjct: 235 SRVAPTGTLPAPDGGDPEGFHTEITYAITPSGDGKVYDFWAVSRDWATDDAEVTE----- 289
Query: 391 YFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNL 428
+ ++S V QD+ L+ L E+ +EL N+
Sbjct: 290 FLYKSNRTVVMQDVDALNLLQRTLGGERAGYQELSINI 327
>gi|239988406|ref|ZP_04709070.1| putative oxygenase Rieske iron-sulfur component [Streptomyces
roseosporus NRRL 11379]
Length = 363
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR-L 186
WYP+ L++ V + ++I LY+ G + +DRC HR LS G ++DG L
Sbjct: 37 WYPVALSRSVRKEGVAAAVFAGERIALYRAKSGAVHALEDRCAHRQVPLSMG-VVDGETL 95
Query: 187 ECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
C YH W + G+G+ +IP L DA+ PR VR Y V+E+ G+V+V+ P +P+K
Sbjct: 96 RCCYHAWAYRGDGRISQIPYLAKGDARPPRG--VRAYPVREAYGLVFVF-----PGDPEK 148
Query: 246 -----LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
LP +A P ++ ++ + +S L ENL+D H
Sbjct: 149 AEVTPLPDVPAYASPRYRTMTFSRTVRCHYSFLHENLLDMNH 190
>gi|424060551|ref|ZP_17798042.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Ab33333]
gi|404668503|gb|EKB36412.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Ab33333]
Length = 358
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|367475962|ref|ZP_09475388.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 285]
gi|365271749|emb|CCD87856.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 285]
Length = 347
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 142/343 (41%), Gaps = 44/343 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V A L T+ + +V+Y+ G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KQALLPRTICGKHVVMYRKADGTIAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F +G+C +P+ I SACVR Y E +W+WM + +P +P
Sbjct: 69 CGYHGLKFSPQGRCAF---MPSQETINPSACVRAYPAVERHRFIWLWMGEPALADPATIP 125
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
P + ++ D+ ++++NLMD H H S + F+VT
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGS---SIGNDAVAEAPFDVT 182
Query: 308 --ERTD------RG------FAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG--E 351
ERT RG +A Q G+ +RFEAPC + + TG E
Sbjct: 183 HGERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQIIRFEAPCTVTIDVGVAPTGTGAPE 242
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQSASKVFE 401
S G+ G + + T T + F Y + S +F
Sbjct: 243 GDRSQGV-------NGMVLNTITPETDKTCHYFWAFARNYQLSEQRLTTEIREGVSGIFR 295
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D L +Q + ++ P + +++NL +ID R+ +D+
Sbjct: 296 EDEFILEAQQRAM--DENPGR-VFYNL-NIDAGAMWARRIIDR 334
>gi|215484103|ref|YP_002326328.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|421622339|ref|ZP_16063242.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC074]
gi|421795000|ref|ZP_16231088.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-21]
gi|213987796|gb|ACJ58095.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|408695955|gb|EKL41509.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC074]
gi|410402452|gb|EKP54569.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-21]
Length = 358
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|405351774|ref|ZP_11023192.1| Phenylpropionate dioxygenase [Chondromyces apiculatus DSM 436]
gi|397093075|gb|EJJ23807.1| Phenylpropionate dioxygenase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 393
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 145/364 (39%), Gaps = 59/364 (16%)
Query: 126 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR 185
+ WY L+ ++ PL T+F +VL++D +G+ +DRC HR A+LS G + DGR
Sbjct: 34 DYWYVACLSTELRPGKPLARTLFGTGLVLFRDAQGQPTALRDRCLHRNARLSRGAVFDGR 93
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAK---IPRSACVRT--------------YEVKESQ 228
+ C YHGW ++ G V++P L + + AC R + E
Sbjct: 94 IGCPYHGWVYDASGAVVEVPSLGPSQRSELLNAEACAREGLKPEPCALGRVSRFPAVEQD 153
Query: 229 GVVWVWMSQKTPPN--PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 286
G+V+V+M P P ++P ++ + G+ + P + L+EN MD H
Sbjct: 154 GLVFVYMGGDAPARAAPFRVP---HWGQDGWTVYFMVTRFPNGVTNLVENFMDVPHTLFV 210
Query: 287 H---------DRTDYSAKREDAQPL-GFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPC 336
H R + +R + L ++ + T G G+ + + + F P
Sbjct: 211 HPGWFRKPARKRVPATVRRAEGSVLVTYKQAQDTLTGL-GRLFNPRGLPLVHTDMFHVP- 268
Query: 337 VLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKS--------MLIVRFGTTGTSPWIKLFP 388
N VD GE + C P G S L V +K
Sbjct: 269 ----NVTRVDYLWGEHGFVIN-SQCTPAGPTDSWVYTAISYRLPVDVPGALVGRALKPLV 323
Query: 389 DWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELY----FNLRSIDTWVAEYRKWMDK 444
WY Q V +QD+ + Q E LL P +Y +L D + YR+W+ +
Sbjct: 324 RWYTRQ----VIQQDVDIMDIQREALLDG--PGGGVYSGTEADLHHAD--IEAYRRWLRE 375
Query: 445 AGHG 448
G G
Sbjct: 376 GGQG 379
>gi|169796641|ref|YP_001714434.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
baumannii AYE]
gi|213156161|ref|YP_002318581.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB0057]
gi|301347277|ref|ZP_07228018.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB056]
gi|301510924|ref|ZP_07236161.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB058]
gi|301595598|ref|ZP_07240606.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB059]
gi|417573227|ref|ZP_12224081.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC-5]
gi|421644603|ref|ZP_16085081.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-235]
gi|421646206|ref|ZP_16086658.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-251]
gi|421657203|ref|ZP_16097476.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-83]
gi|421700370|ref|ZP_16139887.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-58]
gi|421800681|ref|ZP_16236650.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC1]
gi|169149568|emb|CAM87457.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
baumannii AYE]
gi|213055321|gb|ACJ40223.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB0057]
gi|400208795|gb|EJO39765.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC-5]
gi|404570752|gb|EKA75825.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-58]
gi|408504744|gb|EKK06479.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-235]
gi|408517593|gb|EKK19131.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-251]
gi|408713779|gb|EKL58935.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-83]
gi|410406552|gb|EKP58555.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC1]
Length = 358
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|21224976|ref|NP_630755.1| oxidoreductase subunit alpha [Streptomyces coelicolor A3(2)]
gi|3334811|emb|CAA19959.1| oxidoreductase alpha subunit [Streptomyces coelicolor A3(2)]
Length = 359
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 144/338 (42%), Gaps = 54/338 (15%)
Query: 127 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGKGELRCHQDRCPHRLAKLSEG--QLI 182
+WY + +V + LG TV + +VLY+ + G + H DRC HR LSE +L
Sbjct: 11 QWYVAAYSHEVGREL-LGRTVLGEPLVLYRAEEDGGPVVLH-DRCVHRRYPLSEAPTRLD 68
Query: 183 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 242
R+ C YHG+ ++ G CV +P ++PR+A V +Y V E +VWVW+ +
Sbjct: 69 GDRIVCGYHGFTYDTTGTCVYVP---GQKRVPRTARVASYPVAERDSLVWVWIGDPALAD 125
Query: 243 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQ-P 301
P+ +P + PG+ V + + D+ +L++NL+D +H H + E A+ P
Sbjct: 126 PEAVPRARHLDAPGWVTVRGMEPIDADYGLLVDNLLDLSHETYLH--GGHIGTPEVAETP 183
Query: 302 LGFEVTE-----RTDR---------------GFAGQWGREKDGSMPNFLRFEAPCVL--- 338
+ EV E R R G G+ R +D + + APC+
Sbjct: 184 ITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIVGRIDRWQD------IEYHAPCLYVLH 237
Query: 339 -----QNNRESVDNKTGEKHYSTGLFLCRPTGQGKSM---LIVRFGTTGTSPWIKLFPDW 390
+ D E ++ + P+G GK + R T + +
Sbjct: 238 SRVAPTGTVPAPDGGDPEGFHTEITYAITPSGDGKVYDFWAVSRDWATDDAEVTE----- 292
Query: 391 YFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNL 428
+ ++S V QD+ L+ L E+ +EL N+
Sbjct: 293 FLYKSNRTVVMQDVDALNLLQRTLGGERAGYQELSINI 330
>gi|356577261|ref|XP_003556746.1| PREDICTED: LOW QUALITY PROTEIN: pheophorbide a oxygenase,
chloroplastic-like [Glycine max]
Length = 330
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 108/266 (40%), Gaps = 30/266 (11%)
Query: 162 LRCHQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP---RSA 217
L H D C HRLA LS G++ GRL C YH W F G+G+ IPQ P D + + A
Sbjct: 70 LAVHDDACSHRLAPLSNGRIDQWGRLXCAYHDWCFNGKGESKFIPQAPPDGPLIFHFKKA 129
Query: 218 CVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSI 272
CV Y ++W ++ P D + P+ P + ++PY + +
Sbjct: 130 CVAAYPSTVQNDILW-FLPNTDPQYKDIITRKRPPFIPETDDPSSTKLMGNRDIPYGYEL 188
Query: 273 LLENLMDPAHIPISHDRTDYSAK--REDAQPLGFEV---TERTD-RGFAGQWGREKDGSM 326
+ENLMDP H+P +H + K R F + E+ D GF+ G
Sbjct: 189 PIENLMDPTHVPYAHYGLMGTLKPCRHIRCMYLFXLDMSIEKLDINGFSASQGE------ 242
Query: 327 PNFLRFEAPCVL-----QNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTS 381
+F PC+ RE+ K+ + +FLC KS I F S
Sbjct: 243 -GISKFMEPCIFYAYTPDQPRET--QKSSAQKKICLVFLCALVSPSKSRFIWSFPRNFAS 299
Query: 382 PWIKLFPDWYFHQSASKVFEQDMGFL 407
K+ P W H + + D+ L
Sbjct: 300 WMDKILPRWISHMGVKLILDSDLYLL 325
>gi|86747254|ref|YP_483750.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
gi|86570282|gb|ABD04839.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
Length = 355
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 126 EEWYPLYLTKDVPDDAPLGL-TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDG 184
WYPL ++DV LG + +V+Y+ GE D CPHRLA LS G+L
Sbjct: 13 NNWYPLTWSRDV--TRALGCHRILGIDLVVYRSEAGEPIALDDVCPHRLAPLSIGKLKGD 70
Query: 185 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 244
+EC YHG F +G+C++IP P IP +A V +Y + E G+VW+W +P
Sbjct: 71 AIECGYHGMTFARDGRCIRIPGQPI---IPPNARVPSYPLHEKMGLVWIWPGDPALADPA 127
Query: 245 KLPWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRTDYSAKRED 298
+ + +P + + ++ L +NL DPAH+ H T +A E+
Sbjct: 128 LIYDLPQYGQPDWHAAHGDALRIGTNYLNLADNLCDPAHVSFVHLSTLGNAASEE 182
>gi|300696759|ref|YP_003747420.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CFBP2957]
gi|299073483|emb|CBJ52999.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CFBP2957]
Length = 342
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + +++V Y+ +G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEIADKPLGRRICGERMVFYRGQEGKVAALEDFCPHRGAPLSLGFVRDGHLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GKC +P ++ C+R + V E G +WVW +P ++
Sbjct: 66 CGYHGLTMKADGKCASMP----GQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
E + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 HLEWAESKTWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAP 175
>gi|403527463|ref|YP_006662350.1| vanillate O-demethylase oxygenase component [Arthrobacter sp.
Rue61a]
gi|403229890|gb|AFR29312.1| vanillate O-demethylase oxygenase component [Arthrobacter sp.
Rue61a]
Length = 367
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGR-- 185
W+ ++ L T+ + + LY+ G G D C HRLA LS+G+L+ GR
Sbjct: 22 WFVAGWDHEISAKGILARTIAGRPLALYRTGDGRAVALADACWHRLAPLSQGKLV-GRDE 80
Query: 186 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 245
++C YHG ++ G+C +PA + SA V ++ V E VWVW+ T +P
Sbjct: 81 IQCPYHGLRYNAAGRCTS---MPAQETLNPSATVPSFPVVERYRYVWVWLGDPTKADPGL 137
Query: 246 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGF 304
LP P + D TIH P ++ ++L+NLMD H H S +E+ F
Sbjct: 138 LPDMHQLDSPEWAGDGETIHA-PCNYQLVLDNLMDLTHEEFVHSS---SIGQEELSESEF 193
Query: 305 EVTERTDRGFAGQWGREKDG 324
EVT +W R D
Sbjct: 194 EVTHDETSVTVTRWMRNIDA 213
>gi|349701885|ref|ZP_08903514.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
europaeus LMG 18494]
Length = 351
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ L +++ + PLG+T+ D +V+Y+ G ++ D CPHR LS G+ +
Sbjct: 33 WYPVALVREL-GEQPLGVTLLDAPLVVYRAG-ADIVIADDLCPHRGVPLSMGKGDGQTVA 90
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG++F G+GKCV++P P D+ IP +RTY E G++W + + + +P
Sbjct: 91 CAYHGFRFGGQGKCVRVPAHP-DSGIPSKLNLRTYPAVERYGLIWTCLRPEG--DAVAIP 147
Query: 248 WFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDYSAKRED-------- 298
++ P FQ ++ ++ +E +D AH H TD A E+
Sbjct: 148 PMPHWNDPAFQQINCPWIDIAGFAGRQVEGFIDVAHFAFVH--TDTFADPENPVVPPYKT 205
Query: 299 -AQPLGFEVTER----------TDRGFAG-QWGR 320
P GFE R +DRG AG +W R
Sbjct: 206 RITPDGFEAEYRSSVGNYPIGKSDRGRAGFEWLR 239
>gi|193076823|gb|ABO11546.2| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 17978]
Length = 391
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L C YHG +G
Sbjct: 51 DKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLVCGYHGLVMGCDG 110
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 259
K V +P ++ C + Y V E G +WVW +K + KLP E P +
Sbjct: 111 KTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLPTLEWADHPEWSY 166
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
+ + D+ ++++NLMD H H + + ++A P+
Sbjct: 167 GGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 209
>gi|158333387|ref|YP_001514559.1| Rieske (2Fe-2S) domain-containing protein [Acaryochloris marina
MBIC11017]
gi|158303628|gb|ABW25245.1| rieske 2Fe-2S domain protein [Acaryochloris marina MBIC11017]
Length = 496
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 37/208 (17%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
++W ++WYP+ + D P +T+ + +V+++ +G+ D CPH+L +LS G++
Sbjct: 26 FNWLKQWYPVSPLSYLDDSCPTPITLLGKNLVIWQH-QGQWIAMDDVCPHKLTQLSLGKV 84
Query: 182 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVWM 235
DG L C HGW F+ +G+CV+ P LPA P + + V TY + QG++W+W
Sbjct: 85 QADGTLVCRQHGWCFDQQGQCVQNPMLPAQLDQPAAYHNVRSHVTTYPTQVEQGLLWIWP 144
Query: 236 SQ-----------------KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLM 278
+ KT P +K W + E+P +++ +EN
Sbjct: 145 DRNDRAFADCQQKQPATLPKTSPKWNKTDWH-------------MIEVPLGYTVSIENSF 191
Query: 279 DPAHIPISHDRTDYSAKREDAQPLGFEV 306
DP H H+ + GFE+
Sbjct: 192 DPVHAQFLHEGIGTFSPANAIPMQGFEL 219
>gi|221200592|ref|ZP_03573633.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2M]
gi|221208419|ref|ZP_03581421.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2]
gi|421472997|ref|ZP_15921148.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|221171607|gb|EEE04052.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2]
gi|221179164|gb|EEE11570.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2M]
gi|400221927|gb|EJO52348.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
Length = 347
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D PLG + +++V ++DG+G + +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEFASKPLGRQICGERMVFFRDGQGTVAALEDFCPHRGAPLSLGTVRDGHLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW---MSQKTPPNPD 244
C YHG +GKC +P ++ +R Y E G VWVW +Q P
Sbjct: 66 CGYHGLTMGADGKCTSMPC----QRVGGIPAIRRYPAVERYGFVWVWPGDPAQADPATIH 121
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
L W ++ PG+ ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 PLHWADD---PGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQPEIEEAPP 175
>gi|445425152|ref|ZP_21437231.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
WC-743]
gi|444753805|gb|ELW78443.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
WC-743]
Length = 358
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 141/349 (40%), Gaps = 52/349 (14%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +D+ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACYPEDI-QDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG EGK + +P ++ C + Y E G +WVW + + KLP
Sbjct: 66 CGYHGLVMGCEGKTISMPA----QRVNGFPCNKAYAAIEKFGFIWVWPGDQALADESKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIHCDYRLMVDNLMDLTHETYVHSSSIGQKEIDEALPITKVDG 181
Query: 303 GFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDN--------------K 348
+TER P F + C + +VD +
Sbjct: 182 DHVITERYIENVIA----------PPFWQMALRCNNLADDVAVDRWQRCHFVAPSNVHIE 231
Query: 349 TGEKHYSTGLFLCRPTGQGKSMLIVRFGT--TGTSPWIKLFPDWYFHQS----------- 395
G H G + P + S ++V F + T TS W F Q
Sbjct: 232 VGVAHAGHGGYHA-PKDKKVSSIVVDFISPETETSHWYFWGMARNFQQDNPTLTDLIREG 290
Query: 396 ASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
K+F +D+ L Q + +L+ P ++L + +ID + RK +D+
Sbjct: 291 QGKIFTEDLEMLEQQQQNILRN--PHRQLL--MLNIDAGGVQSRKVIDR 335
>gi|332855082|ref|ZP_08435687.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332870056|ref|ZP_08439017.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332727662|gb|EGJ59079.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332732472|gb|EGJ63724.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
Length = 391
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L C YHG +G
Sbjct: 51 DKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLVCGYHGLVMGCDG 110
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 259
K V +P ++ C + Y V E G +WVW +K + KLP E P +
Sbjct: 111 KTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLPTLEWADHPEWSY 166
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
+ + D+ ++++NLMD H H + + ++A P+
Sbjct: 167 GGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 209
>gi|148555930|ref|YP_001263512.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501120|gb|ABQ69374.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 361
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++ ++ A + + D + +++ G DRCPHRL LSEG + L
Sbjct: 7 WYVAAMSHEIAPGAVISRMICDVPMAIFRSLGGVASILLDRCPHRLYPLSEGTVEAHGLR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG F G+G C +I P+ ++IP +ACV Y +ES G++WVW LP
Sbjct: 67 CAYHGLVFAGDGGCREI---PSQSEIPANACVTAYPARESHGLIWVWPGDAALAASTPLP 123
Query: 248 WFEN----FARPGFQ--------DVSTIHELPYDHSILL--ENLMDPAHIPISHDRT 290
FE A F V+ H + D + +L +NL+D H H +T
Sbjct: 124 AFETGEGYLAGLDFSCLDPSSLWGVAGPHVIHLDANYMLAVDNLLDLTHTAFVHAKT 180
>gi|423095041|ref|ZP_17082837.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
gi|397886188|gb|EJL02671.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
Length = 265
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V A T+ ++ +V ++D G + DRCPHR A L G L +
Sbjct: 8 WYAAAWGSEVKVGALFQRTLLNEPVVFFRDSHGAAQAIADRCPHRFAPLGMGVLKGDAVR 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G G CV P D IPR+A V+ Y + E ++W+WM + + +P
Sbjct: 68 CPYHGLEFDGSGSCVHYPH--GDGAIPRAAKVKAYPLVERYSLLWIWMGDMSLADATLIP 125
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
F + ++ + +N+MD +HI H T
Sbjct: 126 DFSCMDGDHWYVGKRYLHAKANYVLETDNIMDLSHIEFLHPST 168
>gi|421624090|ref|ZP_16064966.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC098]
gi|408702121|gb|EKL47535.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC098]
Length = 358
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 146/343 (42%), Gaps = 40/343 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQKEIDEALPVTKVDG 181
Query: 303 GFEVTERTDRGFAGQ--WGREKDGSMPNFLRFEAPCVLQNNR------ESVDNKTGEKHY 354
+TER W G N L + P V + R +V + G H
Sbjct: 182 DHVITERYMENVIAPPFWQMALRG---NHLADDVP-VDRWQRCHFFAPSNVHIEVGVAHA 237
Query: 355 STGLFLCRPTGQGKSMLIVRFGT--TGTSPWI------KLFPDW-----YFHQSASKVFE 401
G + P + S ++V F T T TS W PD + K+F
Sbjct: 238 GHGGYHA-PKDKKVSSIVVDFITPETETSHWYFWGMARNFQPDNAELTDQIREGQGKIFT 296
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D+ L Q + +L P ++L + +ID + RK +D+
Sbjct: 297 EDLEMLEQQQQNILNN--PHRKLL--MLNIDAGGVQSRKVIDR 335
>gi|375093382|ref|ZP_09739647.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora marina XMU15]
gi|374654115|gb|EHR48948.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora marina XMU15]
Length = 354
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 146 TVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 205
T+ + IV Y+ GE DRC HR LSE +L ++ C YHG+ ++ G CV +P
Sbjct: 26 TILGEPIVFYRTEAGEAVALADRCVHRRYPLSESRLDGDKIVCGYHGFTYDKAGSCVFVP 85
Query: 206 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE 265
+IPR+A V +Y + E VWVW+ +P +P + P + VS +
Sbjct: 86 ---GQTRIPRTARVPSYPLVEQDSFVWVWIGDHDKADPALIPRAPWLSDPAYTTVSGMEP 142
Query: 266 LPYDHSILLENLMDPAH 282
L + +L++NLMD +H
Sbjct: 143 LAARYDLLVDNLMDLSH 159
>gi|158339719|ref|YP_001520726.1| Rieske (2Fe-2S) domain-containing protein [Acaryochloris marina
MBIC11017]
gi|158309960|gb|ABW31576.1| rieske 2Fe-2S domain protein Pao, putative [Acaryochloris marina
MBIC11017]
Length = 492
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 179/459 (38%), Gaps = 93/459 (20%)
Query: 122 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQL 181
++W ++WYP+ + P +T+ +++V++ + + D CPH+L +LS G++
Sbjct: 28 FNWLKQWYPISPLSYLDSTCPTPITILGKKLVVWHHER-QWTVMDDTCPHKLTQLSLGKI 86
Query: 182 ID-GRLECLYHGWQFEGEGKCVKIPQLP---ADAKIPRS--ACVRTYEVKESQGVVWVWM 235
D G L C HGWQF+ G+CVKIP L + A + R+ + V TY + +Q ++WVW+
Sbjct: 87 QDDGTLVCRQHGWQFDCSGQCVKIPMLADSGSSAAVYRNVRSHVSTYPTQVAQELLWVWL 146
Query: 236 ----------SQKTP---PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282
QK P P+P + W E A DV P +++ LE+ +DP+H
Sbjct: 147 DCSSAAQEECQQKQPATLPDPSE-QWTE--AEWHLSDV------PVGYTVSLESSLDPSH 197
Query: 283 IPISHDRTDYSAKREDAQP---LGFEVTERTDRGFAGQWG--REKDGSMPNFLRFEAPCV 337
H+ + A P L E + GF + G + M RF PC
Sbjct: 198 AQFLHEGI-FGFSPATAMPMRDLELEGEMSAEDGFMLRHGGYNAFNQGMRATRRFCPPCA 256
Query: 338 LQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKL-FPDW------ 390
N TG F+ PT G I +F P + F W
Sbjct: 257 ---NMTQYHLPTGGIQIFQLYFV--PTTPGHCRYIGKFAIDTPPPAPRFNFFQWANRQLW 311
Query: 391 ----------YFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRK 440
H A K+ +QD+ + +Q + + + +F + D + R
Sbjct: 312 GLLPQDVQVGLQHLGAYKLSDQDITAMHAQEQNEAADPEHRRTSFFPTPA-DQGILTLRT 370
Query: 441 WMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRY 500
W + G P +T +L G+ T L +R+
Sbjct: 371 WFKQFAEGGP-----ATNTL-----------------------YSEGVETTSDEQLYDRW 402
Query: 501 FRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGA 539
RH C CR +V + L+ A L LAI+ A
Sbjct: 403 HRHTKLCPSCRHSV-------DRLANAQKLCQRLAIVSA 434
>gi|421674174|ref|ZP_16114109.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC065]
gi|421690706|ref|ZP_16130374.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-116]
gi|445487023|ref|ZP_21457644.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AA-014]
gi|404564084|gb|EKA69276.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-116]
gi|410384935|gb|EKP37433.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC065]
gi|444769250|gb|ELW93447.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AA-014]
Length = 358
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 40/343 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +W+W +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWIWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPVTKVDG 181
Query: 303 GFEVTERTDRGFAGQ--WGREKDGSMPNFLRFEAPCVLQNNR------ESVDNKTGEKHY 354
+TER W G N L + P V + R +V + G H
Sbjct: 182 DHVITERYMENVIAPPFWQMALRG---NHLADDVP-VDRWQRCHFFAPSNVHIEVGVAHA 237
Query: 355 STGLFLCRPTGQGKSMLIVRFGT--TGTSPWI------KLFPDW-----YFHQSASKVFE 401
G + P + S ++V F T T TS W PD + K+F
Sbjct: 238 GHGGYHA-PKDKKVSSIVVDFITPETETSHWYFWGMARNFQPDNAELTDQIREGQGKIFT 296
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D+ L Q + +L P ++L + +ID + RK +D+
Sbjct: 297 EDLEMLEQQQQNILNN--PHRKLL--MLNIDAGGVQSRKVIDR 335
>gi|409400349|ref|ZP_11250444.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Acidocella sp. MX-AZ02]
gi|409130634|gb|EKN00384.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Acidocella sp. MX-AZ02]
Length = 342
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + ++ + PLG T+ +++V Y+ G++ +D CPHR A LS G + DG+L
Sbjct: 7 WYVAAMPDELAE-TPLGRTICGEKMVFYRGAGGKVAAVEDFCPHRGAPLSLGYVEDGKLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG EGK +++P ++ +++Y V+E G +WVW K +P +
Sbjct: 66 CGYHGLAMGCEGKALEMP----GQRVNGFPAIKSYAVEERYGFIWVWPGDKAKADPATIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
E P + ++ + D+ ++++NLMD H H
Sbjct: 122 HLEWAVNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVH 161
>gi|108757788|ref|YP_629242.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108461668|gb|ABF86853.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 363
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 123/318 (38%), Gaps = 55/318 (17%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
W+ L + ++ D PL T+ +VL++ G+ DRCPHR LS G++ +G+L+
Sbjct: 26 WFILCASSEL-GDKPLARTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVKEGQLQ 84
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 245
C YHGW+F+G G+C IP + R+ C + +E G VWV+ + P P +
Sbjct: 85 CGYHGWRFDGAGQCRAIPGFLGEPGA-RARCATAHATREQDGFVWVYSTPGVEPTTEPYR 143
Query: 246 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH----------DRTDYSAK 295
P E AR + V P LEN +D H H + D +
Sbjct: 144 FPLLE--ARE-YTTVRRTLRAPGSLHSTLENTLDVPHTAYLHGGLFRTEEKRNEIDVVVR 200
Query: 296 REDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYS 355
R + + E G G+ G + +F RF P + Q V+ + G+
Sbjct: 201 RSADKVEAEYIGEPRPSGLVGRLLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGD---- 251
Query: 356 TGLFLCRPTGQGKSMLIVRFGTTGTSPWIKL----------FPDWYFHQS-------ASK 398
S ++V T S W L P W + A
Sbjct: 252 ------------TSHIMVTSAMTPVSDWDTLVYAVVTFRLPLPRWLVRAALPLLMPVALH 299
Query: 399 VFEQDMGFLSSQNEVLLK 416
+F QD L Q E + +
Sbjct: 300 IFGQDARILRQQTETIRR 317
>gi|255065254|ref|ZP_05317109.1| phenylpropionate dioxygenase [Neisseria sicca ATCC 29256]
gi|255050675|gb|EET46139.1| phenylpropionate dioxygenase [Neisseria sicca ATCC 29256]
Length = 330
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYPL +K + D P+ + QQ+VL + G+ C D CPHR LS G+++ G+L+
Sbjct: 10 WYPLIPSKQL-KDKPVHRELLGQQLVLVR-LNGQAACMDDCCPHRHVPLSAGKIVSGKLQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHGW+F+ +GK + + + + V T+ +E VWV + P P
Sbjct: 68 CCYHGWEFDAQGKVLTV--VGGMCACEEAESVPTFPCREYDDWVWVCLVSDIPFEP---- 121
Query: 248 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
+ +F P GF+ + + + D +EN +DP H H + + R+ Q
Sbjct: 122 -YADFEAPEGFETANAVRYMEGDFIHAIENFLDPTHTRYIHAKLLRNNGRQSMQI----S 176
Query: 307 TERTDRGFAGQW 318
+RGF +
Sbjct: 177 QSHHERGFVTHY 188
>gi|255597961|ref|XP_002536894.1| oxidoreductase, putative [Ricinus communis]
gi|223518190|gb|EEF25490.1| oxidoreductase, putative [Ricinus communis]
Length = 293
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 20/184 (10%)
Query: 116 ERRVADYD--WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRL 173
E++VA D WY ++P + T+ + +VLY+ G DRC HR
Sbjct: 14 EKKVAPEDRFIRNSWYVALWADELPAGKLVHQTILGEPVVLYRKEDGAPAAIVDRCSHRF 73
Query: 174 AKLSEGQLIDG-RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
A LS G+L+ G R++C YHG +F+ GKCVK P + IP ++ +R++ V E +W
Sbjct: 74 APLSMGKLLPGNRIQCPYHGLEFDQTGKCVKNPH--GNCTIPAASHLRSFPVIEKYKFIW 131
Query: 233 VWMSQKTPPNPDKLPWFE--------NFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 284
+WM T +P K+P + + G+ ++ +EL +++NL+D +H
Sbjct: 132 IWMGD-TQADPAKIPDYSCLDTAPAAHITDTGYLNIKAHYEL------IVDNLLDLSHTA 184
Query: 285 ISHD 288
H+
Sbjct: 185 YVHE 188
>gi|403673643|ref|ZP_10935934.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp. NCTC
10304]
Length = 358
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 146/343 (42%), Gaps = 40/343 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPVTKVDD 181
Query: 303 GFEVTERTDRGFAGQ--WGREKDGSMPNFLRFEAPCVLQNNR------ESVDNKTGEKHY 354
+TER W G N L + P V + R +V + G H
Sbjct: 182 DHVITERYMENVIAPPFWQMALRG---NHLADDVP-VDRWQRCHFFAPSNVHIEVGVAHA 237
Query: 355 STGLFLCRPTGQGKSMLIVRFGT--TGTSPWI------KLFPDW-----YFHQSASKVFE 401
G + P + S ++V F T T TS W PD + K+F
Sbjct: 238 GHGGYHA-PKDKKVSSIVVDFITPETETSHWYFWGMARNFQPDNAELTDQIREGQGKIFT 296
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D+ L Q + +L P ++L + +ID + RK +D+
Sbjct: 297 EDLEMLEQQQQNILNN--PHRKLL--MLNIDAGGVQSRKVIDR 335
>gi|221210451|ref|ZP_03583431.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|421478825|ref|ZP_15926554.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|221169407|gb|EEE01874.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|400223985|gb|EJO54251.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 347
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D PLG + +++V ++DG+G + +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEFASKPLGRQICGERMVFFRDGEGTVAALEDFCPHRGAPLSLGTVRDGHLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW---MSQKTPPNPD 244
C YHG +GKC +P ++ +R Y E G VWVW +Q P
Sbjct: 66 CGYHGLTMGADGKCTSMPC----QRVGGIPAIRRYPAVERYGFVWVWPGDPAQADPATIH 121
Query: 245 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
L W ++ PG+ ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 PLHWADD---PGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQPEIEEAPP 175
>gi|445407257|ref|ZP_21432263.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-57]
gi|444781031|gb|ELX04954.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-57]
Length = 358
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 146/343 (42%), Gaps = 40/343 (11%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPV----QRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL----- 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPVTKVDG 181
Query: 303 GFEVTERTDRGFAGQ--WGREKDGSMPNFLRFEAPCVLQNNR------ESVDNKTGEKHY 354
+TER W G N L + P V + R +V + G H
Sbjct: 182 DHVITERYMENVIAPPFWQMALRG---NHLADDVP-VDRWQRCHFFAPSNVHIEVGVAHA 237
Query: 355 STGLFLCRPTGQGKSMLIVRFGT--TGTSPWI------KLFPDW-----YFHQSASKVFE 401
G + P + S ++V F T T TS W PD + K+F
Sbjct: 238 GHGGYHA-PKDKKVSSIVVDFITPETETSHWYFWGMARNFQPDNAELTDQIREGQGKIFT 296
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D+ L Q + +L P ++L + +ID + RK +D+
Sbjct: 297 EDLEMLEQQQQNILNN--PHRKLL--MLNIDAGGVQSRKVIDR 335
>gi|415908364|ref|ZP_11552965.1| Vanillate O-demethylase, oxygenase subunit [Herbaspirillum
frisingense GSF30]
gi|407762803|gb|EKF71586.1| Vanillate O-demethylase, oxygenase subunit [Herbaspirillum
frisingense GSF30]
Length = 349
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D PLG + ++IV Y+ +G++ +D CPHR A LS G + DG+L
Sbjct: 7 WY-VACTPDEIASKPLGRQICGEKIVFYRGAEGQVAAVEDFCPHRGAPLSLGFVRDGQLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GK V +P ++ C+R++ V E G +WVW +K +P +
Sbjct: 66 CGYHGLEMGCDGKPVSMP----GQRVRGFPCIRSFAVVERYGFIWVWPGEKELADPALIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
E P + ++ + D+ ++++NLMD H H + K D P+ V
Sbjct: 122 HLEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVH-ASSIGQKEIDEAPVNTRV 179
>gi|421787610|ref|ZP_16223955.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-82]
gi|410406503|gb|EKP58507.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-82]
Length = 358
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +++ D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +GK V +P ++ C + Y V E G +WVW +K + KLP
Sbjct: 66 CGYHGLVMGCDGKTVSMPA----QRVNGFPCNKAYAVIEKFGFIWVWPGEKALADEAKLP 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|402567996|ref|YP_006617340.1| Vanillate monooxygenase [Burkholderia cepacia GG4]
gi|402249193|gb|AFQ49646.1| Vanillate monooxygenase [Burkholderia cepacia GG4]
Length = 373
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + ++ +V Y+ G++ +D CPHR A LS G + DG L
Sbjct: 21 WY-VACTPDEIDGKPLGRKICNESMVFYRAADGQVAALEDFCPHRGAPLSLGFVRDGVLV 79
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + GK +P P +R++ V E G VWVW + +P +LP
Sbjct: 80 CGYHGLEMGCNGKAAGMPGQRVGGFPP----IRSFPVVERYGFVWVWPGDASEADPARLP 135
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
+ P + ++ + D+ ++++NLMD H H + + ++A P
Sbjct: 136 ALQWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPP 189
>gi|319794238|ref|YP_004155878.1| rieske (2fe-2S) iron-sulfur domain [Variovorax paradoxus EPS]
gi|315596701|gb|ADU37767.1| Rieske (2Fe-2S) iron-sulfur domain [Variovorax paradoxus EPS]
Length = 348
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WYP+ + + ++ P+ L ++I L++DG+G L +DRCPHR A LS+G ++ RL
Sbjct: 25 WYPICPSHFIKEN-PISLRRLGRKIALWRDGEGVLHALEDRCPHRGAPLSQGVILGDRLS 83
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +G ++P P K+ S R + V+E G V+++ S++ P L
Sbjct: 84 CPYHGVEVRHDGVVTRVPGSPG-CKLEGSQATRHFHVQERAGAVFLYNSKEPVDIPPSLV 142
Query: 248 WFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
E + E D+ +L+N+MDP H H ++ A+ + + G
Sbjct: 143 LPEQLTDEAEYSSFLCYTEWKGDYRYVLDNVMDPMHGTYLHKQSHSMAEGDSSAKFGI-- 200
Query: 307 TERTDRGFA 315
+TD GF
Sbjct: 201 -RQTDIGFV 208
>gi|424854633|ref|ZP_18278991.1| Rieske domain-containing protein [Rhodococcus opacus PD630]
gi|356664680|gb|EHI44773.1| Rieske domain-containing protein [Rhodococcus opacus PD630]
Length = 341
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 116 ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAK 175
+R +A+ W+P+ D+ D P T+ +V+Y+DG+G + RCPHR
Sbjct: 10 KRELAEASMRRSWFPVARLCDL--DKPQTATLLGVGLVIYRDGEGRISVQSRRCPHRGGD 67
Query: 176 LSEGQLIDGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW 234
LS G++ + C YHGW+F +G C +IP L KIP A + TY E G VW
Sbjct: 68 LSMGEVHQSSIGCPYHGWEFSSTDGSCSRIPSLADQGKIPPRASIATYPAVERFGHVWTV 127
Query: 235 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHS----ILLENLMDPAHIPISHDRT 290
+ + W + D+ + P D S + +EN D AH P H +
Sbjct: 128 LEDPIRDMYEIEEWQD-------LDLEWLAADPIDSSVGVGVTIENFRDVAHFPFVH-KV 179
Query: 291 DYSAKREDAQPL-----GFEV-TERTDRGFAGQWGREKDGSM 326
E +PL G +V +R +G W + D M
Sbjct: 180 SMGPTPEVVEPLDVNRDGLDVWMDRPLDAGSGDWANDGDCMM 221
>gi|75427753|sp|P94679.1|TSAM1_COMTE RecName: Full=Toluene-4-sulfonate monooxygenase system iron-sulfur
subunit TsaM1; AltName: Full=TS methylmonooxygenase
system, oxygenase M; AltName: Full=Toluenesulfonate
methyl-monooxygenase oxygenase component TsaM1
gi|1790867|gb|AAC44804.1| toluenesulfonate methyl-monooxygenase oxygenase component TsaM
[Comamonas testosteroni]
Length = 347
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++P + T+ ++ ++LY+D +G + ++RC HR A L G+ +
Sbjct: 7 WYVAAWDTEIPAEGLFHRTLLNEPVLLYRDTQGRVVALENRCCHRSAPLHIGRQEGDCVR 66
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
CLYHG +F G CV+I P +IP C+++Y V E +VW+WM NPD +
Sbjct: 67 CLYHGLKFNPSGACVEI---PGQEQIPPKTCIKSYPVVERNRLVWIWMGDPARANPDDIV 123
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
+ P ++ ++ ++++NL+D H+ H T
Sbjct: 124 DYFWHDSPEWRMKPGYIHYQANYKLIVDNLLDFTHLAWVHPTT 166
>gi|226951632|ref|ZP_03822096.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ATCC 27244]
gi|226837613|gb|EEH69996.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ATCC 27244]
Length = 358
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D PLG T+ ++IV Y+ + ++ +D CPHR A LS G + DG L C YHG +G
Sbjct: 18 DKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDGNLVCGYHGLVMGCDG 77
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 259
K V +P + C + Y V E G +WVW +K + KLP E P +
Sbjct: 78 KTVSMPA----QRTHGFPCNKAYAVIEKYGFIWVWPGEKALADESKLPTLEWAEHPEWSY 133
Query: 260 VSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPL 302
+ + D+ ++++NLMD H H + + ++A P+
Sbjct: 134 GGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|416979260|ref|ZP_11937841.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. TJI49]
gi|325519915|gb|EGC99177.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. TJI49]
Length = 354
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 140 DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 199
D PL T+ + +VL++ GE+ +DRC H+ LS G L L C YHG F+ G
Sbjct: 30 DRPLARTLLGRPVVLFRLPSGEVGALEDRCCHKSLPLSCGSLESRGLRCGYHGLLFDRAG 89
Query: 200 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPG 256
C++I P +IP SACV +Y V+E +VW+W+ P P F + R
Sbjct: 90 TCIEI---PGQERIPASACVSSYPVQERDAIVWIWIGDAANREPTCAPPSYSFHSDPRYR 146
Query: 257 FQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 290
F + ++ PY ++ +NLMD +H+ H +T
Sbjct: 147 FGGGNYHYDAPY--QLIHDNLMDLSHLGYVHLKT 178
>gi|226363807|ref|YP_002781589.1| iron-sulfur protein [Rhodococcus opacus B4]
gi|226242296|dbj|BAH52644.1| putative iron-sulfur protein [Rhodococcus opacus B4]
Length = 341
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 116 ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAK 175
+R +A+ W+P+ D+ D P T+ +V+Y+DG+G + RCPHR
Sbjct: 10 KRELAEASMRRSWFPVARLCDL--DTPQTATLLGVSLVIYRDGEGRISVQSRRCPHRGGD 67
Query: 176 LSEGQLIDGRLECLYHGWQF-EGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW 234
LS G++ + C YHGW+F +G C +IP L KIP A + TY E G VW
Sbjct: 68 LSMGEVHRSSIGCPYHGWEFSSADGSCSRIPSLADQGKIPPRASIATYPAVERFGHVWTV 127
Query: 235 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHS----ILLENLMDPAHIPISHDRT 290
+ + W G D+ + P D S + +EN D AH P H +
Sbjct: 128 LEDPIRDMYEIEEW------QGL-DLEWLAADPIDSSVGVGVTIENFRDVAHFPFVH-KV 179
Query: 291 DYSAKREDAQPL-----GFEV-TERTDRGFAGQWGREKDGSM 326
E +PL G +V +R +G W + D M
Sbjct: 180 SMGPTPEVVEPLIVNRDGLDVWMDRPLDAGSGDWANDGDCMM 221
>gi|374603828|ref|ZP_09676802.1| Rieske (2Fe-2S) domain-containing protein [Paenibacillus
dendritiformis C454]
gi|374390553|gb|EHQ61901.1| Rieske (2Fe-2S) domain-containing protein [Paenibacillus
dendritiformis C454]
Length = 325
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 136 DVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQF 195
D + P+ + + +++V+++ G G + +D C HR A LS G + +G L C YH W+F
Sbjct: 19 DEVKEKPIQVHIMGERVVVFRTGDG-VHAFKDLCIHRGAALSLGCVKNGHLVCPYHAWEF 77
Query: 196 EGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPW--FENFA 253
+ G CV IPQLPA+ IP+ A V Y +E G +WV + K PW F +
Sbjct: 78 DASGACVHIPQLPAEQAIPKKAQVTAYGCEERYGFIWVNLGGKDA------PWFPFPEYE 131
Query: 254 RPGFQDV----STIHELPYDHSILLENLMDPAHIPISHD 288
G++ V T+ P ++EN +D H+ + H+
Sbjct: 132 AEGWRHVVWGPQTVEAKP---PRIVENFLDVGHLAVVHE 167
>gi|365887865|ref|ZP_09426679.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3809]
gi|365336509|emb|CCD99210.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3809]
Length = 347
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 141/343 (41%), Gaps = 44/343 (12%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY ++ A L T+ + +V+Y+ G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEI-KQALLPRTICGKHVVMYRKSDGTIAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F +G+C +P+ I SACVR Y E VW+WM +P +P
Sbjct: 69 CGYHGLKFSPQGRCT---YMPSQETINPSACVRAYPAVERHRFVWLWMGDPALADPATIP 125
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
P + ++ D+ ++++NLMD H H S + F+VT
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGS---SIGNDAVAEAPFDVT 182
Query: 308 --ERTD------RG------FAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTG--E 351
ERT RG +A Q G+ +RFEAPC + + TG E
Sbjct: 183 HGERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQIIRFEAPCTVTIDVGVAPTGTGAPE 242
Query: 352 KHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQSASKVFE 401
S G+ G + + T T + F Y + S +F
Sbjct: 243 GDRSQGV-------NGMVLNTITPETDKTCHYFWAFARNYQLSEQRLTTEIREGVSGIFR 295
Query: 402 QDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDK 444
+D L +Q + ++ P + +++NL +ID R+ +D+
Sbjct: 296 EDELILEAQQRAM--DENPGR-VFYNL-NIDAGAMWARRIIDR 334
>gi|326328839|ref|ZP_08195174.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase)
[Nocardioidaceae bacterium Broad-1]
gi|325953370|gb|EGD45375.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase)
[Nocardioidaceae bacterium Broad-1]
Length = 367
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 141/358 (39%), Gaps = 54/358 (15%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY +V PL T+ + L+++ G D C HRLA LS+G+++ ++
Sbjct: 23 WYVAAWDHEVTAKQPLARTIAGVPLALWRNSDGRAVALADACWHRLAPLSKGKVLGDEIQ 82
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG ++ G+C +PA I SA V +Y V E VWVW+ +P +P
Sbjct: 83 CPYHGLRYNSAGRCTS---MPAQETINPSAIVPSYPVVERYRYVWVWVGDPDLADPATVP 139
Query: 248 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEV 306
P + D TI+ P ++ ++L+NLMD H H S +++ FEV
Sbjct: 140 DMHQMDSPDWAGDGETIYA-PCNYQLVLDNLMDLTHEEFVHSS---SIGQDELSEAEFEV 195
Query: 307 TERTDRGFAGQWGREKDG----------SMPNF---------LRFEAPCVLQNNRESVDN 347
+ +W R+ D P F + FEAP + +
Sbjct: 196 SHDDRHVTVTRWMRDIDAPPFWLKNMRDKFPGFTGKVDRWQIIHFEAPSTICIDVGVAKA 255
Query: 348 KTG--EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWY----------FHQS 395
TG E S G+ G M + T TS + F Y Q
Sbjct: 256 GTGAPEGDRSQGV-------NGFVMNTITPETARTSHYFWAFMRNYRLESQTITTQLRQG 308
Query: 396 ASKVFEQDMGFLSSQNEVLLKEKVPTKELY-FNLRSIDTWVAEYRKWMDKA--GHGMP 450
VF +D L++Q + + P E Y N+ + WV R+ +D+ G+P
Sbjct: 309 VHGVFGEDEEMLAAQQRAI--DANPDHEFYSLNIDAGGMWV---RRILDRMLQAEGLP 361
>gi|300693204|ref|YP_003749177.1| vanillate o-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum PSI07]
gi|299075241|emb|CBJ34531.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum PSI07]
Length = 342
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY + T D D PLG + +++V Y+ +G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEIADKPLGRRICGERMVFYRGQEGKVAALEDFCPHRGAPLSLGFVRDGHLV 65
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG + +GKC +P ++ C+R + V E G +WVW +P +
Sbjct: 66 CGYHGLTMKADGKCASMP----GQRVGGFPCIRQFPVVERYGFIWVWPGDPGQADPALIH 121
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQP 301
E + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAP 175
>gi|255572292|ref|XP_002527085.1| pheophorbide A oxygenase, putative [Ricinus communis]
gi|223533590|gb|EEF35329.1| pheophorbide A oxygenase, putative [Ricinus communis]
Length = 248
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 75/164 (45%), Gaps = 32/164 (19%)
Query: 136 DVPDDAPLGLTVFDQQIVLYKDGKGE-LRCHQDRCPHRLAKLSEGQLID-GRLECLYHGW 193
D+ P V +V++ D G + D CPHRLA LSEG++ GRL+C+YHGW
Sbjct: 5 DLNKKVPHAKRVIGINVVVWWDRNGNSWKVFDDICPHRLAPLSEGRIDQWGRLQCVYHGW 64
Query: 194 QFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW----------MSQKTPPNP 243
F G C IPQ P DA G+VW W +S+K P
Sbjct: 65 CFSGSDDCKFIPQAPKDA--------------PQNGIVWFWPNSDPQFKDILSKKKP--- 107
Query: 244 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 287
P+ P + + +L + IL ENL+DPAH+P +H
Sbjct: 108 ---PYIPELDDPSYSKIMGNRDLSFGFEILTENLLDPAHVPYAH 148
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,089,394,766
Number of Sequences: 23463169
Number of extensions: 459443838
Number of successful extensions: 1052213
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2868
Number of HSP's successfully gapped in prelim test: 2825
Number of HSP's that attempted gapping in prelim test: 1043069
Number of HSP's gapped (non-prelim): 6302
length of query: 579
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 431
effective length of database: 8,886,646,355
effective search space: 3830144579005
effective search space used: 3830144579005
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)