Query 037351
Match_columns 178
No_of_seqs 142 out of 822
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 19:29:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037351.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037351hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 6.7E-43 2.3E-47 273.8 7.0 111 27-140 2-116 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 1.2E-40 4E-45 251.6 7.7 106 27-136 1-108 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 4.8E-40 1.6E-44 250.7 8.2 107 29-138 2-111 (116)
4 2cbp_A Cucumber basic protein; 100.0 7.6E-38 2.6E-42 231.2 7.8 94 29-131 1-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 2.4E-33 8.1E-38 205.4 9.1 89 29-131 1-91 (91)
6 1qhq_A Protein (auracyanin); e 99.3 2.5E-12 8.6E-17 98.0 7.3 94 26-131 14-139 (140)
7 1bxv_A Plastocyanin; copper pr 99.2 5.7E-11 2E-15 83.2 6.7 83 30-131 4-91 (91)
8 2cal_A Rusticyanin; iron respi 99.1 6.9E-11 2.4E-15 92.7 6.6 74 57-131 62-154 (154)
9 1iuz_A Plastocyanin; electron 98.9 3.2E-09 1.1E-13 76.1 6.5 88 30-131 3-98 (98)
10 1pmy_A Pseudoazurin; electron 98.9 5.1E-09 1.7E-13 79.4 7.6 71 56-133 21-95 (123)
11 2aan_A Auracyanin A; cupredoxi 98.9 1.2E-08 4.2E-13 77.4 9.5 93 26-131 16-139 (139)
12 1paz_A Pseudoazurin precursor; 98.8 6.1E-09 2.1E-13 78.9 7.3 70 56-132 21-94 (123)
13 1plc_A Plastocyanin; electron 98.8 5.7E-09 2E-13 74.5 6.7 86 31-131 3-99 (99)
14 2gim_A Plastocyanin; beta shee 98.8 1.9E-08 6.6E-13 72.3 9.0 86 30-131 5-105 (106)
15 3erx_A Pseudoazurin; copper pr 98.8 6.3E-09 2.2E-13 79.1 6.4 70 56-132 21-94 (123)
16 1byp_A Protein (plastocyanin); 98.7 1.9E-08 6.3E-13 71.7 6.5 86 31-131 3-99 (99)
17 1kdj_A Plastocyanin; electron 98.7 2.4E-08 8.3E-13 71.4 7.0 87 30-131 2-102 (102)
18 3tu6_A Pseudoazurin (blue copp 98.7 2E-08 6.7E-13 76.8 6.7 71 56-133 23-97 (127)
19 3ef4_A Pseudoazurin, blue copp 98.7 3.7E-08 1.3E-12 75.2 8.0 70 56-132 22-95 (124)
20 2plt_A Plastocyanin; electron 98.7 1.5E-08 5.3E-13 71.8 5.5 89 29-131 2-98 (98)
21 1b3i_A PETE protein, protein ( 98.7 3.3E-08 1.1E-12 70.1 7.2 87 30-131 4-97 (97)
22 1pcs_A Plastocyanin; electron 98.6 6.8E-08 2.3E-12 68.6 5.6 88 30-131 4-98 (98)
23 3cvb_A Plastocyanin; cupredoxi 98.1 7E-06 2.4E-10 58.3 7.4 86 30-131 4-104 (105)
24 4hci_A Cupredoxin 1; structura 98.1 1.3E-06 4.6E-11 62.6 3.3 68 56-131 28-100 (100)
25 3c75_A Amicyanin; copper prote 98.1 5.1E-06 1.7E-10 63.0 5.8 65 56-131 60-132 (132)
26 3ay2_A Lipid modified azurin p 98.1 2.7E-06 9.4E-11 67.9 4.3 90 29-131 43-166 (167)
27 2ux6_A Pseudoazurin; type-1 co 98.0 7.6E-06 2.6E-10 61.6 6.2 67 57-132 22-92 (122)
28 1cuo_A Protein (azurin ISO-2); 98.0 2E-05 6.8E-10 60.1 8.6 89 30-131 4-128 (129)
29 2ov0_A Amicyanin; beta-sandwic 97.8 3E-05 1E-09 56.0 6.0 81 27-131 17-105 (105)
30 1iko_P Ephrin-B2; greek KEY, g 97.8 6.9E-06 2.4E-10 66.4 2.8 79 59-137 25-145 (178)
31 1nwp_A Azurin; electron transp 97.8 2.4E-05 8.2E-10 59.6 5.2 89 30-131 4-128 (128)
32 2iaa_C Azurin; quinoprotein, t 97.8 7.4E-05 2.5E-09 56.8 7.8 25 106-131 102-127 (128)
33 1id2_A Amicyanin; beta barrel, 97.8 6.7E-05 2.3E-09 54.4 6.9 65 56-131 34-106 (106)
34 2ccw_A Azurin II, AZN-2; elect 97.8 7.9E-05 2.7E-09 56.7 7.4 30 101-131 96-128 (129)
35 3czu_B Ephrin-A1; ATP-binding, 97.5 0.00022 7.5E-09 57.8 7.2 101 23-135 24-163 (182)
36 2x11_B Ephrin-A5; receptor-sig 97.4 0.00046 1.6E-08 55.7 7.5 75 58-135 52-165 (177)
37 1iby_A Nitrosocyanin; RED copp 97.0 0.00096 3.3E-08 48.2 5.0 64 57-131 39-111 (112)
38 2vsm_B Ephrin-B2; developmenta 96.9 0.001 3.5E-08 51.7 4.7 74 59-132 24-139 (140)
39 3d12_B Ephrin-B3; beta propell 96.9 0.0024 8.4E-08 49.7 6.7 73 59-131 23-140 (141)
40 1shx_A Ephrin-A5; ephrin signa 96.7 0.0036 1.2E-07 48.5 6.8 74 58-134 23-135 (138)
41 2cua_A Protein (CUA); CUA cent 96.7 0.004 1.4E-07 47.4 6.9 67 57-131 61-134 (135)
42 2wo3_B Ephrin-A2; transferase- 96.1 0.014 4.7E-07 46.2 6.8 74 58-134 32-145 (157)
43 2dv6_A Nitrite reductase; elec 95.8 0.011 3.8E-07 51.9 5.7 76 56-135 55-135 (447)
44 3fsa_A Azurin; copper, cupredo 94.9 0.13 4.3E-06 39.1 8.1 22 106-131 104-125 (125)
45 1fwx_A Nitrous oxide reductase 94.1 0.051 1.8E-06 50.8 5.1 69 57-133 514-593 (595)
46 3s8f_B Cytochrome C oxidase su 94.0 0.097 3.3E-06 41.4 5.8 69 57-131 94-167 (168)
47 3hei_B Ephrin-A1; EPH receptor 92.5 0.2 7E-06 38.4 5.3 73 58-131 22-131 (132)
48 3sbq_A Nitrous-oxide reductase 91.5 0.24 8.2E-06 46.7 5.6 71 57-132 559-637 (638)
49 1mzy_A Copper-containing nitri 87.9 0.7 2.4E-05 38.9 5.3 76 58-133 66-153 (333)
50 1oe1_A Dissimilatory copper-co 85.6 1.1 3.8E-05 37.7 5.3 77 58-134 67-154 (336)
51 3gdc_A Multicopper oxidase; be 85.0 1.4 4.8E-05 36.5 5.6 78 58-135 68-157 (288)
52 1kbv_A ANIA, major outer membr 79.0 2.2 7.6E-05 36.0 4.7 75 58-134 72-158 (327)
53 2bw4_A Copper-containing nitri 78.0 2.8 9.6E-05 35.2 5.0 77 58-134 73-160 (340)
54 3hb3_B Cytochrome C oxidase su 77.5 12 0.0004 32.0 8.8 66 59-133 192-265 (298)
55 2zwn_A Two-domain type laccase 76.3 3.6 0.00012 34.8 5.3 78 57-134 36-128 (339)
56 2zoo_A Probable nitrite reduct 73.7 2.5 8.5E-05 36.8 3.7 75 58-134 62-148 (442)
57 3cg8_A Laccase; oxidoreductase 70.2 8.1 0.00028 32.9 6.0 34 105-138 279-312 (343)
58 1oe1_A Dissimilatory copper-co 69.8 4.6 0.00016 33.8 4.3 36 101-136 286-322 (336)
59 1fft_B Ubiquinol oxidase; elec 69.1 21 0.00072 30.6 8.4 68 57-131 152-225 (315)
60 1mzy_A Copper-containing nitri 69.0 5.1 0.00018 33.5 4.5 36 101-136 286-322 (333)
61 3g5w_A Multicopper oxidase typ 67.8 4.1 0.00014 34.3 3.6 77 58-134 36-127 (318)
62 1v54_B Cytochrome C oxidase po 64.0 28 0.00096 28.3 7.8 30 101-132 183-215 (227)
63 1aoz_A Ascorbate oxidase; oxid 63.5 13 0.00046 33.4 6.3 77 58-134 36-125 (552)
64 1yel_A AT1G16640; CESG, protei 60.6 3.9 0.00013 28.9 1.8 23 56-78 74-96 (104)
65 1zpu_A Iron transport multicop 60.0 15 0.0005 33.2 5.9 77 58-134 36-126 (534)
66 3sqr_A Laccase; multicopper ox 59.5 17 0.0006 33.4 6.4 34 100-133 155-188 (580)
67 2q9o_A Laccase-1; multicopper 58.9 14 0.00049 33.4 5.7 76 58-133 69-158 (559)
68 3gdc_A Multicopper oxidase; be 52.8 5.7 0.0002 32.8 1.8 32 101-132 257-288 (288)
69 3tas_A Small laccase, multi-co 52.8 23 0.00079 29.5 5.6 31 105-135 113-149 (313)
70 3kw8_A Laccase, putative coppe 50.9 9.2 0.00031 31.3 2.8 33 106-138 239-271 (276)
71 1cyx_A CYOA; electron transpor 50.9 15 0.00053 29.7 4.1 68 58-131 43-115 (205)
72 3kw8_A Laccase, putative coppe 50.7 20 0.00069 29.2 4.9 77 59-136 39-144 (276)
73 3t9w_A Small laccase, multi-co 49.1 41 0.0014 27.8 6.6 31 106-136 130-166 (299)
74 2j5w_A Ceruloplasmin, ferroxid 49.0 9.5 0.00033 37.5 3.0 74 57-134 633-719 (1065)
75 2gsm_B Cytochrome C oxidase su 48.8 16 0.00054 30.4 3.9 67 59-132 174-246 (262)
76 3l6w_A Hemocyanin 1; cupredoxi 48.5 16 0.00054 33.4 4.2 71 58-131 413-491 (491)
77 2nms_A CMRF35-like-molecule 1; 48.2 5.1 0.00018 28.4 0.7 33 105-140 85-119 (124)
78 1sdd_A Coagulation factor V; c 46.8 2.8 9.5E-05 35.0 -1.0 32 101-132 269-300 (306)
79 3t6v_A Laccase; beta barrel, o 46.3 35 0.0012 30.5 6.0 36 100-135 96-132 (495)
80 3pxl_A Laccase; 4-copper prote 43.8 40 0.0014 30.2 6.0 36 100-135 95-131 (499)
81 1kbv_A ANIA, major outer membr 43.8 18 0.0006 30.3 3.5 34 101-134 275-309 (327)
82 2uxt_A Protein SUFI, SUFI; oxi 43.2 13 0.00045 32.7 2.7 75 58-134 52-140 (451)
83 2r7e_B Coagulation factor VIII 42.6 14 0.00046 35.3 2.9 30 106-135 269-300 (770)
84 2bw4_A Copper-containing nitri 42.0 29 0.00098 28.9 4.6 36 101-136 292-328 (340)
85 3t9w_A Small laccase, multi-co 41.6 13 0.00045 30.9 2.4 34 105-138 260-293 (299)
86 3iuw_A Activating signal coint 41.3 11 0.00037 26.5 1.5 14 58-71 36-50 (83)
87 2qcp_X Cation efflux system pr 40.6 16 0.00054 25.0 2.2 16 57-72 51-66 (80)
88 2vb2_X Copper protein, cation 39.7 16 0.00056 25.4 2.3 20 53-72 55-74 (88)
89 1sdd_A Coagulation factor V; c 37.6 49 0.0017 27.2 5.3 27 108-134 140-168 (306)
90 3aw5_A Multicopper oxidase; be 37.5 11 0.00038 33.2 1.3 77 58-136 40-130 (448)
91 2zoo_A Probable nitrite reduct 35.2 33 0.0011 29.6 3.9 35 101-135 265-300 (442)
92 2j5w_A Ceruloplasmin, ferroxid 35.0 26 0.0009 34.4 3.6 77 57-137 272-361 (1065)
93 1v10_A Laccase; multicopper bl 34.9 57 0.002 29.1 5.6 34 101-134 117-151 (521)
94 3zx1_A Oxidoreductase, putativ 34.6 23 0.00079 31.7 2.9 77 58-136 84-175 (481)
95 2l55_A SILB,silver efflux prot 33.4 28 0.00095 23.9 2.6 19 54-72 42-60 (82)
96 4i1k_A B3 domain-containing tr 32.1 22 0.00077 26.8 2.1 18 56-73 113-130 (146)
97 3abg_A Bilirubin oxidase; clea 31.7 67 0.0023 28.9 5.5 75 59-135 72-160 (534)
98 2ls3_A High affinity copper up 37.3 10 0.00035 21.5 0.0 16 159-174 13-28 (29)
99 2k75_A Uncharacterized protein 29.3 26 0.0009 24.8 2.0 30 30-70 41-70 (106)
100 2xu9_A Laccase; oxidoreductase 29.1 40 0.0014 29.2 3.5 70 59-132 50-135 (439)
101 3rrq_A Protein PD-1, programme 28.8 19 0.00066 25.4 1.2 10 105-116 85-94 (129)
102 1hfu_A Laccase 1; oxidoreducta 28.5 64 0.0022 28.6 4.7 34 101-134 96-130 (503)
103 3tas_A Small laccase, multi-co 28.1 48 0.0016 27.5 3.7 31 106-136 245-275 (313)
104 2dv6_A Nitrite reductase; elec 27.3 51 0.0017 28.3 3.8 35 101-135 402-436 (447)
105 1xne_A Hypothetical protein PF 26.9 15 0.00052 27.0 0.3 12 58-69 33-44 (113)
106 4he6_A Peptidase family U32; u 25.9 25 0.00086 23.9 1.3 18 56-73 26-43 (89)
107 1sdd_B Coagulation factor V; c 25.9 37 0.0013 31.0 2.8 32 101-132 296-327 (647)
108 3cg8_A Laccase; oxidoreductase 24.2 58 0.002 27.5 3.5 28 108-135 151-184 (343)
109 1sdd_B Coagulation factor V; c 23.4 85 0.0029 28.6 4.7 76 58-135 71-178 (647)
110 2z0t_A Putative uncharacterize 22.4 28 0.00097 25.4 1.0 11 58-68 32-42 (109)
111 1wia_A Hypothetical ubiquitin- 21.1 99 0.0034 20.6 3.6 20 121-140 67-86 (95)
112 3g5w_A Multicopper oxidase typ 20.2 1.1E+02 0.0038 25.4 4.4 34 101-134 239-278 (318)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=6.7e-43 Score=273.81 Aligned_cols=111 Identities=28% Similarity=0.606 Sum_probs=99.0
Q ss_pred eeEEEEEcCCCCCCCCCCCCccccccccccccceeeCCEEEEEEeC--CcEEEE-CcccccccCCCCCceeccCCceEEE
Q 037351 27 TSTEFEVGGDNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK--DSVMAV-TEVEYKKCRSSHPLFYSNNGNTVYK 103 (178)
Q Consensus 27 ~a~~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~--hsV~~V-~~~~Y~~C~~s~pi~~~~~G~~~v~ 103 (178)
+|++|+|||+.||+++++ ..+|++||++++|+|||+|+|+|.+ |+|+|| ++++|+.|+.++++..+++|+++|+
T Consensus 2 ~a~~~~VGg~~GW~~~~~---~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~ 78 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSS---PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIE 78 (138)
T ss_dssp CCCEEETTGGGCSSCCSS---TTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEE
T ss_pred CceEEEECCcCcCcCCCC---ccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEE
Confidence 578999999999999742 4689999999999999999999984 999999 9999999999999999999999999
Q ss_pred e-cccceEEEEeCCCCCCCCCCeEEEEEecCCCCCCCC
Q 037351 104 L-AKPGLFYFISGVSGHCERGLKMIIKVLETPSPFPYQ 140 (178)
Q Consensus 104 L-~~~G~~YFiCsv~gHC~~GmKl~I~V~~~~~~p~~~ 140 (178)
| +++|++||||++++||++||||+|+|.+..++++++
T Consensus 79 L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~~~~~ 116 (138)
T 1jer_A 79 RLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMP 116 (138)
T ss_dssp ECCSSEEEEEECCSTTTGGGTCEEEEEEECCC------
T ss_pred eccCCcCEEEEcCCCCccccCCEEEEEEcCCCCCCCCC
Confidence 9 999999999999999999999999999887765543
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=1.2e-40 Score=251.57 Aligned_cols=106 Identities=38% Similarity=0.746 Sum_probs=96.4
Q ss_pred eeEEEEEcCCCCCCCCCCCCccccccccccccceeeCCEEEEEEeC--CcEEEECcccccccCCCCCceeccCCceEEEe
Q 037351 27 TSTEFEVGGDNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK--DSVMAVTEVEYKKCRSSHPLFYSNNGNTVYKL 104 (178)
Q Consensus 27 ~a~~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~--hsV~~V~~~~Y~~C~~s~pi~~~~~G~~~v~L 104 (178)
+|++|+|||+.||++++ ..+|++||++++|+|||+|+|+|.+ |+|+||++++|+.|+.++|+..+++|+++|+|
T Consensus 1 ~a~~~~VG~~~GW~~~~----~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L 76 (109)
T 1ws8_A 1 MATVHKVGDSTGWTTLV----PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPL 76 (109)
T ss_dssp CCCEEETTGGGCSCSSS----CCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEEC
T ss_pred CCcEEEeCCCCCccCCC----CcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEE
Confidence 36899999999999873 3689999999999999999999985 99999999999999999999999999999999
Q ss_pred cccceEEEEeCCCCCCCCCCeEEEEEecCCCC
Q 037351 105 AKPGLFYFISGVSGHCERGLKMIIKVLETPSP 136 (178)
Q Consensus 105 ~~~G~~YFiCsv~gHC~~GmKl~I~V~~~~~~ 136 (178)
+++|++||||++++||++||||+|+|.+++++
T Consensus 77 ~~~G~~yFic~~~gHC~~GmKl~I~V~~~~s~ 108 (109)
T 1ws8_A 77 KRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSS 108 (109)
T ss_dssp CSSEEEEEECCSTTTTTTTCEEEEEECC----
T ss_pred CCCcCEEEECCCCCcccCCCEEEEEEcCCCCC
Confidence 99999999999999999999999999865543
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=4.8e-40 Score=250.72 Aligned_cols=107 Identities=28% Similarity=0.591 Sum_probs=94.5
Q ss_pred EEEEEcCCCCCCCCCCCCccccccccccccceeeCCEEEEEEeC--CcEEEECcccccccCCCCCceeccCCceEEEecc
Q 037351 29 TEFEVGGDNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK--DSVMAVTEVEYKKCRSSHPLFYSNNGNTVYKLAK 106 (178)
Q Consensus 29 ~~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~--hsV~~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~ 106 (178)
++|+|||+.||+++. ...+|++||++++|+|||+|+|+|.+ |+|+||++++|+.|+.++|+..+++|+++|+|++
T Consensus 2 ~~~~VG~~~GW~~~~---~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~ 78 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPS---DPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNT 78 (116)
T ss_dssp CEEETTGGGCSSCCS---STTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCS
T ss_pred eEEEECCcCcCcCCC---CCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECC
Confidence 579999999999872 23789999999999999999999984 9999999999999999999999999999999999
Q ss_pred cceEEEEeCCCCCCCCCCeEEE-EEecCCCCCC
Q 037351 107 PGLFYFISGVSGHCERGLKMII-KVLETPSPFP 138 (178)
Q Consensus 107 ~G~~YFiCsv~gHC~~GmKl~I-~V~~~~~~p~ 138 (178)
+|++||||++++||++|||++| +|.++++++|
T Consensus 79 ~G~~yFic~~~~HC~~Gmkl~In~V~~~~~~~~ 111 (116)
T 1x9u_A 79 TGPQYYICTVGDHCRVGQKLSINVVGAGGAGGG 111 (116)
T ss_dssp CEEEEEECCSTTTTTTTCEEEEEEECC------
T ss_pred CCCEEEECCCCCccccCCEEEEEEECCCCCCCC
Confidence 9999999999999999999999 7876655443
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=7.6e-38 Score=231.17 Aligned_cols=94 Identities=31% Similarity=0.688 Sum_probs=89.3
Q ss_pred EEEEEcCCCCCCCCCCCCccccccccccccceeeCCEEEEEEeC--CcEEEECcccccccCCCCCceeccCCceEEEecc
Q 037351 29 TEFEVGGDNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK--DSVMAVTEVEYKKCRSSHPLFYSNNGNTVYKLAK 106 (178)
Q Consensus 29 ~~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~--hsV~~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~ 106 (178)
++|+|||+.||++ +|++||++++|+|||+|+|+|.+ |+|+||++++|+.|+.++|+..+++|+++|+| +
T Consensus 1 ~~~~VG~~~GW~~--------~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~ 71 (96)
T 2cbp_A 1 AVYVVGGSGGWTF--------NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-P 71 (96)
T ss_dssp CEEETTGGGCSCS--------SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-C
T ss_pred CEEEECCcCCCcc--------ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-c
Confidence 4799999999996 39999999999999999999985 99999999999999999999989999999999 8
Q ss_pred cceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 107 PGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 107 ~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
+|++||||++++||++|||++|+|+
T Consensus 72 ~g~~yFic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 72 KGQSYFICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp SEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred CCCEEEEcCCCCccccCCEEEEEEC
Confidence 9999999999999999999999985
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=100.00 E-value=2.4e-33 Score=205.38 Aligned_cols=89 Identities=33% Similarity=0.605 Sum_probs=83.3
Q ss_pred EEEEEcCCCCCCCCCCCCccccccccccccceeeCCEEEEEEeC--CcEEEECcccccccCCCCCceeccCCceEEEecc
Q 037351 29 TEFEVGGDNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK--DSVMAVTEVEYKKCRSSHPLFYSNNGNTVYKLAK 106 (178)
Q Consensus 29 ~~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~--hsV~~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~ 106 (178)
++|+| ||+++ ++|+++++|+|||+|+|+|.+ |+|+||++++|+.|+.++|+..+++|+++|+|+
T Consensus 1 ~~y~V----gW~~~---------~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~- 66 (91)
T 1f56_A 1 AVYNI----GWSFN---------VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT- 66 (91)
T ss_dssp CEEEE----ECSSS---------CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-
T ss_pred CEEEE----eCCCC---------CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-
Confidence 46899 89963 799999999999999999985 999999999999999999999899999999996
Q ss_pred cceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 107 PGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 107 ~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
+|++||||++++||++|||++|+|.
T Consensus 67 ~g~~yFic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 67 RGQNYFICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp SEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred CCCeEEEcCCCCccccCCEEEEEEC
Confidence 8999999999999999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.33 E-value=2.5e-12 Score=98.01 Aligned_cols=94 Identities=14% Similarity=0.291 Sum_probs=64.3
Q ss_pred eeeEEEEEcCC-CCCCCCCCCCccccccccccccceeeCCEEEEEEeC-------CcEEEECcc-ccccc----------
Q 037351 26 VTSTEFEVGGD-NGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK-------DSVMAVTEV-EYKKC---------- 86 (178)
Q Consensus 26 ~~a~~~~VGg~-~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~-------hsV~~V~~~-~Y~~C---------- 86 (178)
+...++.|+-. .+|.+.| +..+++.||+++|+|.+ |+++..+.. ++..+
T Consensus 14 ~~~~~v~V~~~~~~~~F~P------------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
T 1qhq_A 14 TPAQTVEVRAAPDALAFAQ------------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNAD 81 (140)
T ss_dssp CCSEEEEEEBCSSSSSBSC------------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGG
T ss_pred CCCEEEEEEEeCCCceEeC------------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhccc
Confidence 34567777754 4688864 35689999999988853 777766321 12111
Q ss_pred ----CC---C------CCceeccCCceEEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 87 ----RS---S------HPLFYSNNGNTVYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 87 ----~~---s------~pi~~~~~G~~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
.. . ..+....++..+|+++++|.|||+|++++||..|||..|+|.
T Consensus 82 ~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 82 ALFVPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp GTTCCCTTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ccccCccccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 00 0 111222334556888899999999999999999999999996
No 7
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.16 E-value=5.7e-11 Score=83.21 Aligned_cols=83 Identities=20% Similarity=0.286 Sum_probs=58.7
Q ss_pred EEEEcCC-CCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECcccccccCCCCCceeccCC-ceEEEe
Q 037351 30 EFEVGGD-NGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTEVEYKKCRSSHPLFYSNNG-NTVYKL 104 (178)
Q Consensus 30 ~~~VGg~-~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~~~Y~~C~~s~pi~~~~~G-~~~v~L 104 (178)
+..+|++ .+|.+.| +..++++||+|+|++.. |+|...+...+. ... .....| ...+++
T Consensus 4 ~v~~~~~~~~~~f~P------------~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~----~~~-~~~~~g~~~~~~f 66 (91)
T 1bxv_A 4 AIKMGADNGMLAFEP------------STIEIQAGDTVQWVNNKLAPHNVVVEGQPELS----HKD-LAFSPGETFEATF 66 (91)
T ss_dssp EEEESCTTSCSSEES------------SEEEECTTCEEEEEECSSCCEEEEETTCGGGC----EEE-EECSTTCEEEEEC
T ss_pred EEEEecCCCccEEeC------------CEEEECCCCEEEEEECCCCCcEEEEeCCCccC----ccc-ceeCCCCEEEEEe
Confidence 4456754 4687764 34589999999999863 788765433221 011 122334 457889
Q ss_pred cccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 105 AKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 105 ~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
++||+|+|+|. .||..||+..|.|.
T Consensus 67 ~~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 67 SEPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCEEEEEEeC--CCccCCCEEEEEEC
Confidence 99999999999 89999999999983
No 8
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.13 E-value=6.9e-11 Score=92.71 Aligned_cols=74 Identities=18% Similarity=0.301 Sum_probs=56.4
Q ss_pred ccceeeCCEEEEEEeC------CcEEEEC-cccccccCCCCCce----------eccCCce--EEEecccceEEEEeCCC
Q 037351 57 NHRFKIGDTLQFKYKK------DSVMAVT-EVEYKKCRSSHPLF----------YSNNGNT--VYKLAKPGLFYFISGVS 117 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~------hsV~~V~-~~~Y~~C~~s~pi~----------~~~~G~~--~v~L~~~G~~YFiCsv~ 117 (178)
..++++||+|+|++.+ |++..++ ...|+.|.....+. ...+|.. ++++ +||+|||+|+++
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 4589999999999963 8888873 45777787654332 2222233 5578 999999999999
Q ss_pred CCCCCCCeEEEEEe
Q 037351 118 GHCERGLKMIIKVL 131 (178)
Q Consensus 118 gHC~~GmKl~I~V~ 131 (178)
+||+.||+..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999883
No 9
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.88 E-value=3.2e-09 Score=76.09 Aligned_cols=88 Identities=22% Similarity=0.346 Sum_probs=58.1
Q ss_pred EEEEcC-CCCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECc---ccccccCCCCCceeccCCc-eE
Q 037351 30 EFEVGG-DNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTE---VEYKKCRSSHPLFYSNNGN-TV 101 (178)
Q Consensus 30 ~~~VGg-~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~---~~Y~~C~~s~pi~~~~~G~-~~ 101 (178)
+..+|+ +.++.+.| +..++++||+|.|.+.. |+|...+. ++++.+...........|. ..
T Consensus 3 ~V~m~~~~~~~~F~P------------~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~ 70 (98)
T 1iuz_A 3 IVKLGGDDGSLAFVP------------SKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVV 70 (98)
T ss_dssp EEEESCTTSCCSEES------------SEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEE
T ss_pred EEEEecCCCCcEEeC------------CEEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEE
Confidence 445554 44677764 35689999999999764 78765431 1222221111011223344 37
Q ss_pred EEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 102 YKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 102 v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
++++++|+|+|+|+. ||..||+..|.|.
T Consensus 71 ~tf~~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 71 RKLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred EEcCCCEEEEEEchh--hccCCCEEEEEEC
Confidence 888999999999995 9999999999983
No 10
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.87 E-value=5.1e-09 Score=79.36 Aligned_cols=71 Identities=21% Similarity=0.337 Sum_probs=51.1
Q ss_pred cccceeeCCEEEEEEeC--CcEEEECcccccccCCCCCce-eccCC-ceEEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 56 SNHRFKIGDTLQFKYKK--DSVMAVTEVEYKKCRSSHPLF-YSNNG-NTVYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~--hsV~~V~~~~Y~~C~~s~pi~-~~~~G-~~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
+..++++||+|+|.+.. |+|+..+ .|.+.+... ....| ..+++++++|+|+|+|+ .||..||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1pmy_A 21 ALVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA--PHYMMGMVALVVVG 93 (123)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--TTTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CccccCCEEEEEEc
Confidence 35589999999999874 8987642 232222111 11123 34789999999999998 49999999999998
Q ss_pred cC
Q 037351 132 ET 133 (178)
Q Consensus 132 ~~ 133 (178)
.+
T Consensus 94 ~~ 95 (123)
T 1pmy_A 94 DK 95 (123)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 11
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.86 E-value=1.2e-08 Score=77.44 Aligned_cols=93 Identities=16% Similarity=0.304 Sum_probs=60.4
Q ss_pred eeeEEEEEcC-CCCCCCCCCCCccccccccccccceeeCCEEEEEEe------CCcEEEECcc-----------------
Q 037351 26 VTSTEFEVGG-DNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYK------KDSVMAVTEV----------------- 81 (178)
Q Consensus 26 ~~a~~~~VGg-~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~------~hsV~~V~~~----------------- 81 (178)
+...++.||. ..++.+.| +..++++||+++|+|. .|+++..+..
T Consensus 16 ~~~~~V~v~~~~~~~~F~p------------~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~ 83 (139)
T 2aan_A 16 SGPVTIEIGSKGEELAFDK------------TELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPA 83 (139)
T ss_dssp -CCEEEEEEBCTTSSSBSC------------SEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGG
T ss_pred CcCEEEEEEecCCccEEcC------------CeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhccccc
Confidence 3345666752 34677764 3457999999998886 3676665422
Q ss_pred -cccccCCCCCce---eccCCc-e--EEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 82 -EYKKCRSSHPLF---YSNNGN-T--VYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 82 -~Y~~C~~s~pi~---~~~~G~-~--~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
+|..|...+... ....|. . +++.++||+|+|+|.+++||. ||+..|.|.
T Consensus 84 ~~~~p~~~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 84 ANYLPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp GTTCCSCCTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred ccccCcccccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 455554322111 112342 2 344558999999999999999 999999883
No 12
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.85 E-value=6.1e-09 Score=78.93 Aligned_cols=70 Identities=20% Similarity=0.238 Sum_probs=50.4
Q ss_pred cccceeeCCEEEEEEeC--CcEEEECcccccccCCCCCce-eccCC-ceEEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 56 SNHRFKIGDTLQFKYKK--DSVMAVTEVEYKKCRSSHPLF-YSNNG-NTVYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~--hsV~~V~~~~Y~~C~~s~pi~-~~~~G-~~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
+..++++||+|+|.+.. |+|+... .|.+.+... ....| ...++++++|.|+|+|+ .||..||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAEKFKSKINENYVLTVTQPGAYLVKCT--PHYAMGMIALIAVG 93 (123)
T ss_dssp SEEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCeEEEEec-----ccCCCCccceecCCCCEEEEEeCCCEEEEEEeC--CcccCCCEEEEEEc
Confidence 35589999999999975 8987531 232222111 11123 34789999999999998 59999999999997
Q ss_pred c
Q 037351 132 E 132 (178)
Q Consensus 132 ~ 132 (178)
.
T Consensus 94 ~ 94 (123)
T 1paz_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 4
No 13
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.84 E-value=5.7e-09 Score=74.49 Aligned_cols=86 Identities=16% Similarity=0.244 Sum_probs=57.2
Q ss_pred EEEcCC-CCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECcc---cccccCC---CCCceeccCC-c
Q 037351 31 FEVGGD-NGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTEV---EYKKCRS---SHPLFYSNNG-N 99 (178)
Q Consensus 31 ~~VGg~-~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~~---~Y~~C~~---s~pi~~~~~G-~ 99 (178)
..+|++ .++.+.| +..++++||+|+|++.. |++...+.. +.+.+.. .+.. ....| .
T Consensus 3 v~m~~~~~~~~F~P------------~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~-~~~~G~~ 69 (99)
T 1plc_A 3 VLLGADDGSLAFVP------------SEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDL-LNAKGET 69 (99)
T ss_dssp EEESCTTCCSCEES------------SEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCC-BCSTTCE
T ss_pred EEEecCCCcceEeC------------CEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCcc-ccCCCCE
Confidence 456653 4577654 35689999999998764 888765321 1222211 0111 11234 3
Q ss_pred eEEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 100 TVYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 100 ~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
..+++++||+|+|+|. .||+.||+..|+|.
T Consensus 70 ~~~tf~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 70 FEVALSNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp EEEECCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEECCCceEEEEcC--CCcccCCEEEEEEC
Confidence 4788999999999999 79999999999983
No 14
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.82 E-value=1.9e-08 Score=72.28 Aligned_cols=86 Identities=22% Similarity=0.265 Sum_probs=57.0
Q ss_pred EEEEcCC-CCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECcccc-----cc--cCCCCCceeccCC
Q 037351 30 EFEVGGD-NGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTEVEY-----KK--CRSSHPLFYSNNG 98 (178)
Q Consensus 30 ~~~VGg~-~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~~~Y-----~~--C~~s~pi~~~~~G 98 (178)
+..+|.+ .++.+.| +..++++||+++|.+.. |++...+.... +. +.. +... ...|
T Consensus 5 ~V~~~~~~~~~~F~P------------~~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~-~~~~-~~pG 70 (106)
T 2gim_A 5 TVKLGSDKGLLVFEP------------AKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSH-KQLL-MSPG 70 (106)
T ss_dssp EEEESCTTCCSSEES------------SEEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCB-CSCC-CSTT
T ss_pred EEEEEecCCcceEcC------------CEEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccc-ccee-eCCC
Confidence 4556653 5788764 34589999999999763 88775432110 00 000 1111 1223
Q ss_pred -ceEEEe---cccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 99 -NTVYKL---AKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 99 -~~~v~L---~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
...+++ ++||.|+|+|. .||+.||+..|+|.
T Consensus 71 ~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 71 QSTSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CEEEEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 346788 89999999999 89999999999985
No 15
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.81 E-value=6.3e-09 Score=79.06 Aligned_cols=70 Identities=20% Similarity=0.222 Sum_probs=51.6
Q ss_pred cccceeeCCEEEEEEeC--CcEEEECcccccccCCCCCc--eeccCCceEEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 56 SNHRFKIGDTLQFKYKK--DSVMAVTEVEYKKCRSSHPL--FYSNNGNTVYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~--hsV~~V~~~~Y~~C~~s~pi--~~~~~G~~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
+..++++||+++|.+.+ |+|...+. |.+.+.. ....+....+++++||.|+|+|. .||..||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQVG 93 (123)
T ss_dssp SEEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 45689999999999985 89876421 2222211 11112345789999999999999 79999999999998
Q ss_pred c
Q 037351 132 E 132 (178)
Q Consensus 132 ~ 132 (178)
.
T Consensus 94 ~ 94 (123)
T 3erx_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 4
No 16
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.74 E-value=1.9e-08 Score=71.67 Aligned_cols=86 Identities=17% Similarity=0.264 Sum_probs=57.1
Q ss_pred EEEcC-CCCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECc---ccccccCC---CCCceeccCC-c
Q 037351 31 FEVGG-DNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTE---VEYKKCRS---SHPLFYSNNG-N 99 (178)
Q Consensus 31 ~~VGg-~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~---~~Y~~C~~---s~pi~~~~~G-~ 99 (178)
..+|+ +.++.+.| +..++++||+|+|++.. |++...+. ++++.+.. .+.. ....| .
T Consensus 3 V~~~~~~~~~~F~P------------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~-~~~~G~~ 69 (99)
T 1byp_A 3 VLLGSSDGGLAFVP------------SDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDL-LNAPGEE 69 (99)
T ss_dssp EEESCTTSCCSEES------------SEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCC-BCSTTCE
T ss_pred EEEecCCCcceEeC------------CEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccce-eeCCCCE
Confidence 45664 44677654 34589999999998764 88765432 12222211 0111 11234 3
Q ss_pred eEEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 100 TVYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 100 ~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
..++++++|+|.|+|. .||+.||+..|+|.
T Consensus 70 ~~~~f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 70 YSVTLTEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEEEECSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEeCCCcEEEEEcC--CccccCCEEEEEEC
Confidence 4788999999999999 79999999999983
No 17
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.73 E-value=2.4e-08 Score=71.41 Aligned_cols=87 Identities=16% Similarity=0.256 Sum_probs=57.7
Q ss_pred EEEEcCC-CCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECccccc----ccCCC-----CCceecc
Q 037351 30 EFEVGGD-NGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTEVEYK----KCRSS-----HPLFYSN 96 (178)
Q Consensus 30 ~~~VGg~-~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~~~Y~----~C~~s-----~pi~~~~ 96 (178)
+..+|++ .++.+.| +..++++||+++|.+.. |++...+.++++ .|... +.. ...
T Consensus 2 ~V~~g~~~~~~~F~P------------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 68 (102)
T 1kdj_A 2 KVEVGDEVGNFKFYP------------DSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDL-LSE 68 (102)
T ss_dssp EEEESCTTCCCCEES------------SEEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCC-BBT
T ss_pred EEEEecCCCccEEeC------------CEEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccce-ecC
Confidence 3456753 4566654 34589999999999764 887765333321 11110 111 122
Q ss_pred CC-ceEEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 97 NG-NTVYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 97 ~G-~~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
.| ...+++++||+|+|+|. .||..||+..|.|.
T Consensus 69 pG~~~~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 69 DEPSFKAKVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp TBCEEEECCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 33 34778899999999999 89999999999983
No 18
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.73 E-value=2e-08 Score=76.80 Aligned_cols=71 Identities=21% Similarity=0.239 Sum_probs=51.6
Q ss_pred cccceeeCCEEEEEEeC--CcEEEECcccccccCCCCCce-eccCC-ceEEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 56 SNHRFKIGDTLQFKYKK--DSVMAVTEVEYKKCRSSHPLF-YSNNG-NTVYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~--hsV~~V~~~~Y~~C~~s~pi~-~~~~G-~~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
+..++++||+|.|.+.+ |+|...+. +.+..... ....| ...+++++||.|+|+|. .||..||+..|.|.
T Consensus 23 ~~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 95 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA--PHVGMGMIGAIVVG 95 (127)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 45689999999999985 99876432 22211111 11123 35789999999999999 69999999999998
Q ss_pred cC
Q 037351 132 ET 133 (178)
Q Consensus 132 ~~ 133 (178)
.+
T Consensus 96 ~~ 97 (127)
T 3tu6_A 96 EP 97 (127)
T ss_dssp SC
T ss_pred cC
Confidence 53
No 19
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.72 E-value=3.7e-08 Score=75.16 Aligned_cols=70 Identities=19% Similarity=0.276 Sum_probs=51.7
Q ss_pred cccceeeCCEEEEEEeC--CcEEEECcccccccCCCCCce-eccCC-ceEEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 56 SNHRFKIGDTLQFKYKK--DSVMAVTEVEYKKCRSSHPLF-YSNNG-NTVYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~--hsV~~V~~~~Y~~C~~s~pi~-~~~~G-~~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
+..++++||+|.|.+.. |+|...+. +.+.+... ....| ..+++++++|+|.|+|. .||..||+..|+|.
T Consensus 22 ~~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V~ 94 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA--PHYGMGMVVLVQVG 94 (124)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEEcC--CCCcCCCEEEEEEC
Confidence 45689999999999975 99876421 32222111 11223 34789999999999998 69999999999998
Q ss_pred c
Q 037351 132 E 132 (178)
Q Consensus 132 ~ 132 (178)
.
T Consensus 95 ~ 95 (124)
T 3ef4_A 95 K 95 (124)
T ss_dssp S
T ss_pred C
Confidence 5
No 20
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.72 E-value=1.5e-08 Score=71.83 Aligned_cols=89 Identities=17% Similarity=0.216 Sum_probs=57.1
Q ss_pred EEEEEcCC-CCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECc---ccccccCCCCCceeccCCc-e
Q 037351 29 TEFEVGGD-NGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTE---VEYKKCRSSHPLFYSNNGN-T 100 (178)
Q Consensus 29 ~~~~VGg~-~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~---~~Y~~C~~s~pi~~~~~G~-~ 100 (178)
.+..+|++ .++.+.| +..++++||+++|.+.. |++...+. ++++.+...........|. .
T Consensus 2 ~~V~m~~~~~~~~F~P------------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~ 69 (98)
T 2plt_A 2 ATVKLGADSGALEFVP------------KTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETY 69 (98)
T ss_dssp EEEEESCTTCCSSEES------------SEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEE
T ss_pred EEEEEecCCCCceEeC------------CEEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEE
Confidence 34556643 4677754 34589999999998764 77765421 1122111100011223343 4
Q ss_pred EEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 101 VYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
.++++++|+|+|+|. .||+.||+..|.|.
T Consensus 70 ~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 70 SVKLTAAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp EEECCSCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred EEEeCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 788899999999999 79999999999983
No 21
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.72 E-value=3.3e-08 Score=70.08 Aligned_cols=87 Identities=20% Similarity=0.218 Sum_probs=56.7
Q ss_pred EEEEcCC-CCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECccc---ccccCCCCCceeccCCceEE
Q 037351 30 EFEVGGD-NGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTEVE---YKKCRSSHPLFYSNNGNTVY 102 (178)
Q Consensus 30 ~~~VGg~-~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~~~---Y~~C~~s~pi~~~~~G~~~v 102 (178)
+..+|++ .++.+.| +..++++||+++|.+.. |++...+... .+.+.... .....+....+
T Consensus 4 ~V~~~~~~~~~~F~P------------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~ 70 (97)
T 1b3i_A 4 QIKMGTDKYAPLYEP------------KALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK-LAIAPGSFYSV 70 (97)
T ss_dssp EEEEEETTTEEEEES------------SEEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC-CCCSCSCCEEE
T ss_pred EEEEeccCCccEEeC------------CEEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc-eecCCCCEEEE
Confidence 3445543 4566654 34589999999999764 8876642211 11111111 11112234578
Q ss_pred EecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 103 KLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 103 ~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
++++||+|+|+|. .||+.||+..|.|.
T Consensus 71 tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 71 TLGTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp ECCSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred EeCCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 8899999999999 89999999999983
No 22
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.58 E-value=6.8e-08 Score=68.57 Aligned_cols=88 Identities=16% Similarity=0.240 Sum_probs=55.8
Q ss_pred EEEEcCC-CCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECccc--ccccCCCCCceeccCC-ceEE
Q 037351 30 EFEVGGD-NGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTEVE--YKKCRSSHPLFYSNNG-NTVY 102 (178)
Q Consensus 30 ~~~VGg~-~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~~~--Y~~C~~s~pi~~~~~G-~~~v 102 (178)
+..+|.+ .++.+.| +..++++||+++|.+.. |++...+... -+..+..........| ...+
T Consensus 4 ~V~~~~~~~~~~F~P------------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~ 71 (98)
T 1pcs_A 4 TVKMGSDSGALVFEP------------STVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTS 71 (98)
T ss_dssp EEEESCTTSCSSEES------------SEEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEE
T ss_pred EEEEecCCCccEEeC------------CEEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEE
Confidence 4456643 5677754 34589999999999763 7776543210 0000000001112234 3467
Q ss_pred EecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 103 KLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 103 ~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
++++||+|+|+|. .||..||+..|.|.
T Consensus 72 tf~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 72 TFTEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp ECCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EcCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 8899999999999 79999999999983
No 23
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.15 E-value=7e-06 Score=58.34 Aligned_cols=86 Identities=19% Similarity=0.269 Sum_probs=54.2
Q ss_pred EEEEcCC-CCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECcccccccCC-------CCCceeccCC
Q 037351 30 EFEVGGD-NGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTEVEYKKCRS-------SHPLFYSNNG 98 (178)
Q Consensus 30 ~~~VGg~-~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~~~Y~~C~~-------s~pi~~~~~G 98 (178)
+..+|.+ .+..+.| ...++++||+|+|.... |++..-.. .. .+.. .........|
T Consensus 4 ~V~~~~~~~~~~f~p------------~~i~v~~Gd~V~~~N~~~~~H~v~~~~~-~~-~~~~g~~~~~~~~~~~~i~pG 69 (105)
T 3cvb_A 4 TVKMGADSGLFQFEP------------ANVTVHPGDTVKWVNNKLPPHNILFDDK-QV-PGASKELADKLSHSQLMFSPG 69 (105)
T ss_dssp EEEESCTTCCSCEES------------SEEEECTTEEEEEEECSSCCEEEEECTT-SS-GGGCHHHHHHHCEEEEECSTT
T ss_pred EEEEeecCCccEEeC------------CEEEEcCCCEEEEEECCCCCCeEEEeCC-CC-CcccccccccccccccccCCC
Confidence 4456653 5677764 24589999999998653 66654321 11 1100 0000111233
Q ss_pred c-eEEEe---cccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 99 N-TVYKL---AKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 99 ~-~~v~L---~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
. ..+++ +++|+|+|.|. .|+..||+..|.|.
T Consensus 70 ~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 70 ESYEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp CEEEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CeEEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 3 36677 78999999999 79999999999985
No 24
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.12 E-value=1.3e-06 Score=62.55 Aligned_cols=68 Identities=15% Similarity=0.127 Sum_probs=43.8
Q ss_pred cccceeeCCEEEEEEeC-CcE-EEECcccccccCCCCCceeccCCc---eEEEecccceEEEEeCCCCCCCCCCeEEEEE
Q 037351 56 SNHRFKIGDTLQFKYKK-DSV-MAVTEVEYKKCRSSHPLFYSNNGN---TVYKLAKPGLFYFISGVSGHCERGLKMIIKV 130 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~-hsV-~~V~~~~Y~~C~~s~pi~~~~~G~---~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V 130 (178)
+..++++||++.|.+.+ +.+ ..+.-.++.. ......|. ..++.++||.|.|+|. .||..||+..|.|
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------~~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLGI------DVVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------EEEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCCc------ceeecCCcceeEEEecccCceEEEECc--cccCCCCEEEEEE
Confidence 35689999999999864 211 2221111110 01112232 3566789999999997 5999999999998
Q ss_pred e
Q 037351 131 L 131 (178)
Q Consensus 131 ~ 131 (178)
.
T Consensus 100 e 100 (100)
T 4hci_A 100 K 100 (100)
T ss_dssp C
T ss_pred C
Confidence 4
No 25
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.08 E-value=5.1e-06 Score=63.04 Aligned_cols=65 Identities=11% Similarity=0.166 Sum_probs=44.8
Q ss_pred cccceeeCCEEEEEEeC---CcEEEECccc----ccccCCCCCceeccCCc-eEEEecccceEEEEeCCCCCCCCCCeEE
Q 037351 56 SNHRFKIGDTLQFKYKK---DSVMAVTEVE----YKKCRSSHPLFYSNNGN-TVYKLAKPGLFYFISGVSGHCERGLKMI 127 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~---hsV~~V~~~~----Y~~C~~s~pi~~~~~G~-~~v~L~~~G~~YFiCsv~gHC~~GmKl~ 127 (178)
+..++++||++.|.... |++...+... |+ .. ....|. ..++++++|+|.|+|+. |. ||+..
T Consensus 60 ~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g~~~~~-----s~--~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~ 128 (132)
T 3c75_A 60 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFR-----GE--MMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 128 (132)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEE-----CC--CBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCCccccc-----cc--ccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEE
Confidence 34589999999998653 7876543221 11 00 112233 36788999999999997 76 99999
Q ss_pred EEEe
Q 037351 128 IKVL 131 (178)
Q Consensus 128 I~V~ 131 (178)
|.|.
T Consensus 129 I~V~ 132 (132)
T 3c75_A 129 VIVE 132 (132)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 26
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.07 E-value=2.7e-06 Score=67.89 Aligned_cols=90 Identities=11% Similarity=0.182 Sum_probs=56.2
Q ss_pred EEEEEcCCCCCCCCCCCCccccccccccccce-eeCCEEEEEEeC----------CcEEEECccccc-------------
Q 037351 29 TEFEVGGDNGWHVPNAKEGAQMYNKWASNHRF-KIGDTLQFKYKK----------DSVMAVTEVEYK------------- 84 (178)
Q Consensus 29 ~~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF-~VGDtLvF~y~~----------hsV~~V~~~~Y~------------- 84 (178)
.++.|+.++++.|.| +..++ +.||++.|.+.+ |+++..+..+++
T Consensus 43 ~~V~I~~~d~m~F~P------------~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~ 110 (167)
T 3ay2_A 43 CAATVESNDNMQFNT------------KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTD 110 (167)
T ss_dssp CEEEEEECTTSCBSC------------SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGT
T ss_pred eEEEEEeCCCceEec------------ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccc
Confidence 466777666788764 34467 779987777642 676655433221
Q ss_pred --ccCCCCCc---eeccCCce-EEEec----ccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 85 --KCRSSHPL---FYSNNGNT-VYKLA----KPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 85 --~C~~s~pi---~~~~~G~~-~v~L~----~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
.=+..+-+ .....|.+ .++++ ++|+|+|+|++++|=+ |||..|+|.
T Consensus 111 ~v~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 111 YVKPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp TSCTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred cccccccchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 00000001 01123433 55554 7999999999999999 999999986
No 27
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.04 E-value=7.6e-06 Score=61.58 Aligned_cols=67 Identities=16% Similarity=0.160 Sum_probs=47.3
Q ss_pred ccceeeCCEEEEEEeC--CcEEEECcccccccCCCCCce--eccCCceEEEecccceEEEEeCCCCCCCCCCeEEEEEec
Q 037351 57 NHRFKIGDTLQFKYKK--DSVMAVTEVEYKKCRSSHPLF--YSNNGNTVYKLAKPGLFYFISGVSGHCERGLKMIIKVLE 132 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~--hsV~~V~~~~Y~~C~~s~pi~--~~~~G~~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~~ 132 (178)
..++++||+|.|.... |+|...+ .+-+..... ...+....++++++|+|+|+|+. |+. |+..|.|..
T Consensus 22 ~i~V~~GdtV~f~n~d~~H~v~~~~-----~~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPTDKGHNVETIK-----GMIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEECTTEEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCcEEEEcc-----cccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 4589999999999874 8887643 122211111 11122347889999999999997 887 999999974
No 28
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.04 E-value=2e-05 Score=60.06 Aligned_cols=89 Identities=9% Similarity=0.191 Sum_probs=54.6
Q ss_pred EEEEcCCCCCCCCCCCCccccccccccccceeeC-CEEEEEEeC----------CcEEEECccc----------------
Q 037351 30 EFEVGGDNGWHVPNAKEGAQMYNKWASNHRFKIG-DTLQFKYKK----------DSVMAVTEVE---------------- 82 (178)
Q Consensus 30 ~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF~VG-DtLvF~y~~----------hsV~~V~~~~---------------- 82 (178)
+..|+.++...+.| +..+++.| |++.|.+.+ |+++..+..+
T Consensus 4 ~v~i~~~d~m~F~p------------~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~ 71 (129)
T 1cuo_A 4 ETTVTSGDTMTYST------------RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNN 71 (129)
T ss_dssp EEEEEECSSSCCSC------------SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGT
T ss_pred EEEEEeCCCceEcc------------CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccc
Confidence 44455556777764 35589999 977777642 7766554332
Q ss_pred ccccCCCCCc---eeccCCc---eEEEec---ccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 83 YKKCRSSHPL---FYSNNGN---TVYKLA---KPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 83 Y~~C~~s~pi---~~~~~G~---~~v~L~---~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
|..=+..+-+ .....|. -+|+.+ +||+|+|+|++++|=+ |||..|+|.
T Consensus 72 ~v~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 72 FVTPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TSCTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred ccccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 2110001001 0112332 244444 8999999999999999 999999986
No 29
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.84 E-value=3e-05 Score=56.01 Aligned_cols=81 Identities=15% Similarity=0.136 Sum_probs=52.9
Q ss_pred eeEEEEEcCCCCCCCCCCCCccccccccccccceeeCCEEEEEEeC---CcEEEECccc----ccccCCCCCceeccCC-
Q 037351 27 TSTEFEVGGDNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK---DSVMAVTEVE----YKKCRSSHPLFYSNNG- 98 (178)
Q Consensus 27 ~a~~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~---hsV~~V~~~~----Y~~C~~s~pi~~~~~G- 98 (178)
.+.+|.|.- .+|.+.| ...++++||+|.|.... |++...+..+ ++.. ....|
T Consensus 17 ~a~~~~V~~-~~~~F~P------------~~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~-------~~~pG~ 76 (105)
T 2ov0_A 17 ADGAIVVDI-AKMKYET------------PELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGP-------MMKKEQ 76 (105)
T ss_dssp CTTCEEEEE-ETTEESS------------SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECC-------CBCTTE
T ss_pred CCcCEEEEE-eecEEcC------------CEEEECCCCEEEEEECCCCCEEEEEcCCCCCccccccc-------ccCCCC
Confidence 345555542 4577754 34589999999998653 7876543210 2211 11223
Q ss_pred ceEEEecccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 99 NTVYKLAKPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 99 ~~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
...++++++|+|+|.|.. |- ||+..|.|.
T Consensus 77 ~~~~tf~~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 77 AYSLTFTEAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp EEEEEECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred EEEEEeCCCEEEEEEeCC--CC--CCEEEEEEC
Confidence 346788999999999997 54 999999883
No 30
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.83 E-value=6.9e-06 Score=66.43 Aligned_cols=79 Identities=22% Similarity=0.360 Sum_probs=51.6
Q ss_pred ceeeCCEEEEEEeC-----------CcEEEECcccccccCCCC-Cceec--c--CCceEEEec-------------ccc-
Q 037351 59 RFKIGDTLQFKYKK-----------DSVMAVTEVEYKKCRSSH-PLFYS--N--NGNTVYKLA-------------KPG- 108 (178)
Q Consensus 59 tF~VGDtLvF~y~~-----------hsV~~V~~~~Y~~C~~s~-pi~~~--~--~G~~~v~L~-------------~~G- 108 (178)
.+++||.|-+-=.. +.+++|++++|+.|+... +...+ + .+...+++. ++|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 35669999886331 358899999999998763 22222 1 233333331 367
Q ss_pred eEEEEeCCC-----------CCCCC-CCeEEEEEecCCCCC
Q 037351 109 LFYFISGVS-----------GHCER-GLKMIIKVLETPSPF 137 (178)
Q Consensus 109 ~~YFiCsv~-----------gHC~~-GmKl~I~V~~~~~~p 137 (178)
.|||||.-. |+|.. +|||.|.|...+..+
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~~~ 145 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASSA 145 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC----
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCCCCC
Confidence 799999753 79995 999999997665543
No 31
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.80 E-value=2.4e-05 Score=59.59 Aligned_cols=89 Identities=11% Similarity=0.218 Sum_probs=53.0
Q ss_pred EEEEcCCCCCCCCCCCCccccccccccccce-eeCCEEEEEEeC----------CcEEEECcccccc-----c-------
Q 037351 30 EFEVGGDNGWHVPNAKEGAQMYNKWASNHRF-KIGDTLQFKYKK----------DSVMAVTEVEYKK-----C------- 86 (178)
Q Consensus 30 ~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF-~VGDtLvF~y~~----------hsV~~V~~~~Y~~-----C------- 86 (178)
+..|+.++++.+.| +..++ +.||++.|.+.+ |+++..+.++.+. =
T Consensus 4 ~v~v~~~d~m~F~p------------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~ 71 (128)
T 1nwp_A 4 KVTVDSTDQMSFNT------------KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQ 71 (128)
T ss_dssp EEEEEECTTSCBSC------------SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGT
T ss_pred EEEEEeCCCccEec------------CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccc
Confidence 44566556788864 34467 789987777742 7766543322110 0
Q ss_pred --CCCCC--ce---eccCCc-eEEEe--c--ccce-EEEEeCCCCCCCCCCeEEEEEe
Q 037351 87 --RSSHP--LF---YSNNGN-TVYKL--A--KPGL-FYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 87 --~~s~p--i~---~~~~G~-~~v~L--~--~~G~-~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
...++ +. ....|. ..+++ . ++|. |.|+|++++|=+ |||..|+|.
T Consensus 72 ~~~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 72 YLKDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TSCTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred ccccccchhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 00111 10 112332 24544 3 5776 999999999999 999999883
No 32
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.79 E-value=7.4e-05 Score=56.84 Aligned_cols=25 Identities=28% Similarity=0.388 Sum_probs=22.9
Q ss_pred ccc-eEEEEeCCCCCCCCCCeEEEEEe
Q 037351 106 KPG-LFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 106 ~~G-~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
++| +|.|+|++++|=+ |||..|+|.
T Consensus 102 ~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 102 KEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp CTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCCceEEEEECCCChhH-CCEEEEEEe
Confidence 688 5999999999999 999999985
No 33
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.76 E-value=6.7e-05 Score=54.43 Aligned_cols=65 Identities=11% Similarity=0.162 Sum_probs=44.8
Q ss_pred cccceeeCCEEEEEEeC---CcEEEECccc----ccccCCCCCceeccCC-ceEEEecccceEEEEeCCCCCCCCCCeEE
Q 037351 56 SNHRFKIGDTLQFKYKK---DSVMAVTEVE----YKKCRSSHPLFYSNNG-NTVYKLAKPGLFYFISGVSGHCERGLKMI 127 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~---hsV~~V~~~~----Y~~C~~s~pi~~~~~G-~~~v~L~~~G~~YFiCsv~gHC~~GmKl~ 127 (178)
+..++++||+|.|.... |++...+... |+. . ....| ...++++++|.|.|+|+. |. ||+..
T Consensus 34 ~~i~V~~G~tV~~~N~d~~~H~v~~~~~~~~~~~~~s-----~--~l~~g~~~~~tf~~~G~y~~~C~~--H~--~M~G~ 102 (106)
T 1id2_A 34 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-----E--MMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 102 (106)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-----C--CBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCcEEEEEeCCCCCcccccc-----c--ccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 35589999999999653 7776543210 110 0 11223 336788999999999997 76 99999
Q ss_pred EEEe
Q 037351 128 IKVL 131 (178)
Q Consensus 128 I~V~ 131 (178)
|.|.
T Consensus 103 I~V~ 106 (106)
T 1id2_A 103 VIVE 106 (106)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 34
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.75 E-value=7.9e-05 Score=56.71 Aligned_cols=30 Identities=17% Similarity=0.397 Sum_probs=24.6
Q ss_pred EEEec--ccce-EEEEeCCCCCCCCCCeEEEEEe
Q 037351 101 VYKLA--KPGL-FYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 101 ~v~L~--~~G~-~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
+++.+ ++|. |+|+|++++|=+ |||..|+|.
T Consensus 96 tf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 96 TFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 34444 5665 999999999999 999999985
No 35
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=97.52 E-value=0.00022 Score=57.80 Aligned_cols=101 Identities=17% Similarity=0.287 Sum_probs=56.1
Q ss_pred ccceeeEEEEEcCCCCCCCCCCCCccccccccccccceeeCCEEEEEEeC-------------CcEEEECcccccccCCC
Q 037351 23 IRTVTSTEFEVGGDNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKYKK-------------DSVMAVTEVEYKKCRSS 89 (178)
Q Consensus 23 ~~~~~a~~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y~~-------------hsV~~V~~~~Y~~C~~s 89 (178)
...+++..|.| -|+..++ . +..=--...+++||.|-+-=.. ..+++|++++|++|+..
T Consensus 24 ~~~~sa~rh~V----yWNSsNp----~-F~~~~y~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~ 94 (182)
T 3czu_B 24 GAMDAADRHTV----FWNSSNP----K-FRNEDYTIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQ 94 (182)
T ss_dssp -----CCEEEE----ECSTTCG----G-GTTSCCEEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCC
T ss_pred hhhhhccccce----EEcCCCc----c-ccCCCceEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCC
Confidence 33455666766 5986421 1 1110123468899999876331 13679999999999875
Q ss_pred C-Cceec------c-CCceEEEec-------------ccc-eEEEEeCC----CCCCCCCCeEEEEEecCCC
Q 037351 90 H-PLFYS------N-NGNTVYKLA-------------KPG-LFYFISGV----SGHCERGLKMIIKVLETPS 135 (178)
Q Consensus 90 ~-pi~~~------~-~G~~~v~L~-------------~~G-~~YFiCsv----~gHC~~GmKl~I~V~~~~~ 135 (178)
. +...+ . .|..++++. ++| .||||+.- +|.| ||++|.|.....
T Consensus 95 ~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~GlEF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~~ 163 (182)
T 3czu_B 95 SKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGKEFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKIT 163 (182)
T ss_dssp CGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSCCCCTTCEEEEEEEESSSCCCSC---CEEEEEECC---
T ss_pred CCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCCeeEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCCC
Confidence 3 32222 1 123333221 477 68888852 4666 899999975543
No 36
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=97.38 E-value=0.00046 Score=55.67 Aligned_cols=75 Identities=25% Similarity=0.329 Sum_probs=48.7
Q ss_pred cceeeCCEEEEEEeC------------CcEEEECcccccccCCCCCc-eec--c-----CCceEEEec------------
Q 037351 58 HRFKIGDTLQFKYKK------------DSVMAVTEVEYKKCRSSHPL-FYS--N-----NGNTVYKLA------------ 105 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~------------hsV~~V~~~~Y~~C~~s~pi-~~~--~-----~G~~~v~L~------------ 105 (178)
..+++||.|-+-=+. ..+++|++++|++|+.+... ..+ + .|..++++.
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 468899999876331 13789999999999875432 222 1 133343321
Q ss_pred -ccc-eEEEEeCC-----CCCCCCCCeEEEEEecCCC
Q 037351 106 -KPG-LFYFISGV-----SGHCERGLKMIIKVLETPS 135 (178)
Q Consensus 106 -~~G-~~YFiCsv-----~gHC~~GmKl~I~V~~~~~ 135 (178)
+|| .||||++- ++-| ||++|.|.....
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~ 165 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNS 165 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTT
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCC
Confidence 477 68888743 2346 999999986654
No 37
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.98 E-value=0.00096 Score=48.15 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=41.2
Q ss_pred ccceeeCCEEEEEEeC-----CcEEEECcccccccCCCCCceeccCCce-E--EEecccceEEEEeCCCCCCCC-CCeEE
Q 037351 57 NHRFKIGDTLQFKYKK-----DSVMAVTEVEYKKCRSSHPLFYSNNGNT-V--YKLAKPGLFYFISGVSGHCER-GLKMI 127 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~-----hsV~~V~~~~Y~~C~~s~pi~~~~~G~~-~--v~L~~~G~~YFiCsv~gHC~~-GmKl~ 127 (178)
..++++||+++|++.+ |++. +.. +. . ......|.. . ++.++||+|+|.|.. ||.. +|+..
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~-i~~--~~---~---~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g~ 107 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFS-IDA--FG---V---QEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPGT 107 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEE-EGG--GT---E---EEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEE-EcC--CC---c---eeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEEE
Confidence 4589999999999875 3332 221 11 1 111223332 3 445899999999997 6743 49999
Q ss_pred EEEe
Q 037351 128 IKVL 131 (178)
Q Consensus 128 I~V~ 131 (178)
|.|.
T Consensus 108 i~V~ 111 (112)
T 1iby_A 108 LNVV 111 (112)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9986
No 38
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=96.88 E-value=0.001 Score=51.72 Aligned_cols=74 Identities=22% Similarity=0.368 Sum_probs=48.8
Q ss_pred ceeeCCEEEEEEeC-----------CcEEEECcccccccCCCC-Cceec----cCCceEEEec-------------ccc-
Q 037351 59 RFKIGDTLQFKYKK-----------DSVMAVTEVEYKKCRSSH-PLFYS----NNGNTVYKLA-------------KPG- 108 (178)
Q Consensus 59 tF~VGDtLvF~y~~-----------hsV~~V~~~~Y~~C~~s~-pi~~~----~~G~~~v~L~-------------~~G- 108 (178)
..++||.|-+-=+. ..++.|++++|+.|+.+. +...+ ..+...+++. ++|
T Consensus 24 ~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~ 103 (140)
T 2vsm_B 24 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNK 103 (140)
T ss_dssp CCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 45679999886432 147889999999998763 22222 1233333322 567
Q ss_pred eEEEEeCC-----------CCCCCC-CCeEEEEEec
Q 037351 109 LFYFISGV-----------SGHCER-GLKMIIKVLE 132 (178)
Q Consensus 109 ~~YFiCsv-----------~gHC~~-GmKl~I~V~~ 132 (178)
+||||+.- +|-|.. .||+.|.|..
T Consensus 104 ~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 104 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred ceEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 68888763 357884 8999999964
No 39
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=96.87 E-value=0.0024 Score=49.66 Aligned_cols=73 Identities=19% Similarity=0.416 Sum_probs=48.9
Q ss_pred ceeeCCEEEEEEeC--------------CcEEEECcccccccCCC-CCceec----cCCceEEEec-------------c
Q 037351 59 RFKIGDTLQFKYKK--------------DSVMAVTEVEYKKCRSS-HPLFYS----NNGNTVYKLA-------------K 106 (178)
Q Consensus 59 tF~VGDtLvF~y~~--------------hsV~~V~~~~Y~~C~~s-~pi~~~----~~G~~~v~L~-------------~ 106 (178)
.+++||.|-+-=+. ..+++|++++|++|+.. .+...+ -.+...+++. +
T Consensus 23 ~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF~ 102 (141)
T 3d12_B 23 YPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEFR 102 (141)
T ss_dssp CCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCCC
T ss_pred EecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceeee
Confidence 67889999876432 13788999999999875 333322 1233232211 4
Q ss_pred cc-eEEEEeCC-----------CCCCCC-CCeEEEEEe
Q 037351 107 PG-LFYFISGV-----------SGHCER-GLKMIIKVL 131 (178)
Q Consensus 107 ~G-~~YFiCsv-----------~gHC~~-GmKl~I~V~ 131 (178)
|| .||||++- +|-|.. +||+.|.|.
T Consensus 103 pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 103 SHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp TTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred CCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 67 68999864 467985 899999986
No 40
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=96.75 E-value=0.0036 Score=48.55 Aligned_cols=74 Identities=24% Similarity=0.323 Sum_probs=47.9
Q ss_pred cceeeCCEEEEEEeC------------CcEEEECcccccccCCCCCc-eec--c-----CCceEEEec------------
Q 037351 58 HRFKIGDTLQFKYKK------------DSVMAVTEVEYKKCRSSHPL-FYS--N-----NGNTVYKLA------------ 105 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~------------hsV~~V~~~~Y~~C~~s~pi-~~~--~-----~G~~~v~L~------------ 105 (178)
..+++||.|-+-=+. ..+++|++++|++|+..... ..+ + .|..++++.
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 368889999876431 13779999999999875432 222 1 133343321
Q ss_pred -ccc-eEEEEeCC-----CCCCCCCCeEEEEEecCC
Q 037351 106 -KPG-LFYFISGV-----SGHCERGLKMIIKVLETP 134 (178)
Q Consensus 106 -~~G-~~YFiCsv-----~gHC~~GmKl~I~V~~~~ 134 (178)
+|| .||||++- ++-| |||+|.|.+..
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~~ 135 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 135 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCTT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEccc
Confidence 477 68888743 3446 99999998554
No 41
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.73 E-value=0.004 Score=47.44 Aligned_cols=67 Identities=19% Similarity=0.234 Sum_probs=43.1
Q ss_pred ccceeeCCEEEEEEeCCcEE-EECcccccccCCCCCceeccCC---ceEEEecccceEEEEeCC---CCCCCCCCeEEEE
Q 037351 57 NHRFKIGDTLQFKYKKDSVM-AVTEVEYKKCRSSHPLFYSNNG---NTVYKLAKPGLFYFISGV---SGHCERGLKMIIK 129 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~hsV~-~V~~~~Y~~C~~s~pi~~~~~G---~~~v~L~~~G~~YFiCsv---~gHC~~GmKl~I~ 129 (178)
.-++.+||.+.|..++.+|. .+.-.++. -......| ...++.+++|.|+|.|+. .+| .+|+..|.
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~ip~~~------~k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H--~~M~g~v~ 132 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHVEGTN------INVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH--QNMFGTIV 132 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEETTSS------CEEEECBTBCEEEEEECCSCEEEEEECCSCCSTTS--TTCEEEEE
T ss_pred EEEEcCCCEEEEEEEeCCccceEEecCCC------ceeEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc--CCCEEEEE
Confidence 45899999999999763321 11101111 00111223 346889999999999987 345 68999999
Q ss_pred Ee
Q 037351 130 VL 131 (178)
Q Consensus 130 V~ 131 (178)
|.
T Consensus 133 V~ 134 (135)
T 2cua_A 133 VK 134 (135)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 42
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=96.11 E-value=0.014 Score=46.22 Aligned_cols=74 Identities=20% Similarity=0.311 Sum_probs=46.6
Q ss_pred cceeeCCEEEEEEeC---C----------cEEEECcccccccCCCCCc-eec-------cCCceEEEec-----------
Q 037351 58 HRFKIGDTLQFKYKK---D----------SVMAVTEVEYKKCRSSHPL-FYS-------NNGNTVYKLA----------- 105 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~---h----------sV~~V~~~~Y~~C~~s~pi-~~~-------~~G~~~v~L~----------- 105 (178)
..+++||.|-+-=+. + .+++|++++|++|+..... ..+ ..|..++++.
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G~ 111 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGF 111 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCCe
Confidence 358889999886432 1 2789999999999876422 122 0133333211
Q ss_pred --ccc-eEEEEeCC-----CCCCCCCCeEEEEEecCC
Q 037351 106 --KPG-LFYFISGV-----SGHCERGLKMIIKVLETP 134 (178)
Q Consensus 106 --~~G-~~YFiCsv-----~gHC~~GmKl~I~V~~~~ 134 (178)
+|| .||||+.- +|-| |||+|.|....
T Consensus 112 EF~pG~~YY~ISTS~g~~~gg~C---~rlkV~V~~~~ 145 (157)
T 2wo3_B 112 EFRPGHEYYYISATPPNAVDRPC---LRLKVYVRPTQ 145 (157)
T ss_dssp CCCTTCEEEEEEECTTCSCCTTC---CEEEEEECCCC
T ss_pred eeeCCCeEEEEEecCCCCCCCcc---eeEEEEEEcCC
Confidence 467 69999864 3456 58888887544
No 43
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=95.83 E-value=0.011 Score=51.88 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=51.0
Q ss_pred cccceeeCCEEEEEEeC-----CcEEEECcccccccCCCCCceeccCCceEEEecccceEEEEeCCCCCCCCCCeEEEEE
Q 037351 56 SNHRFKIGDTLQFKYKK-----DSVMAVTEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISGVSGHCERGLKMIIKV 130 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~-----hsV~~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V 130 (178)
...+++.||+++|++.+ |++..-.......|. +....+-...++++++|++||.|.+++|=..||+..|.|
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~----i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V 130 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV----NGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQV 130 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB----CSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee----cCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEE
Confidence 34689999999999864 444321222222232 222222233567788999999999999988899999999
Q ss_pred ecCCC
Q 037351 131 LETPS 135 (178)
Q Consensus 131 ~~~~~ 135 (178)
.....
T Consensus 131 ~~~~~ 135 (447)
T 2dv6_A 131 LPGNR 135 (447)
T ss_dssp ESSCC
T ss_pred eCCcc
Confidence 86544
No 44
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.90 E-value=0.13 Score=39.08 Aligned_cols=22 Identities=14% Similarity=0.345 Sum_probs=18.1
Q ss_pred ccceEEEEeCCCCCCCCCCeEEEEEe
Q 037351 106 KPGLFYFISGVSGHCERGLKMIIKVL 131 (178)
Q Consensus 106 ~~G~~YFiCsv~gHC~~GmKl~I~V~ 131 (178)
++|.|-|+|+ +|= |||..|+|.
T Consensus 104 ~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 104 EGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp --CCEEEECS--SST--TCEEEEEEC
T ss_pred CCccEEEEcC--CCC--CcEEEEEEC
Confidence 5699999999 786 999999883
No 45
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.09 E-value=0.051 Score=50.79 Aligned_cols=69 Identities=12% Similarity=0.171 Sum_probs=43.0
Q ss_pred ccceeeCCEEEEEEeC--------CcEEEECcccccccCCCCCceeccCCceEEEecccceEEEEeCC---CCCCCCCCe
Q 037351 57 NHRFKIGDTLQFKYKK--------DSVMAVTEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISGV---SGHCERGLK 125 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~--------hsV~~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv---~gHC~~GmK 125 (178)
..++.+||++.|...+ |++. +...+.+ + .+....+....++.++||+|||.|.. ..| .||+
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~-ip~~gv~-~----~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H--~gM~ 585 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFT-MGNYGVA-M----EIGPQMTSSVTFVAANPGVYWYYCQWFCHALH--MEMR 585 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEE-ETTTTEE-E----EECTTCEEEEEEECCSCEEEEEECCSCCSTTC--TTCE
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEE-ecCCCcc-e----eeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--cCCE
Confidence 3478899999999865 2222 2111110 1 11111222336788999999999984 356 4999
Q ss_pred EEEEEecC
Q 037351 126 MIIKVLET 133 (178)
Q Consensus 126 l~I~V~~~ 133 (178)
..|.|.+.
T Consensus 586 G~IiV~p~ 593 (595)
T 1fwx_A 586 GRMLVEPK 593 (595)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99999854
No 46
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.96 E-value=0.097 Score=41.43 Aligned_cols=69 Identities=17% Similarity=0.186 Sum_probs=42.1
Q ss_pred ccceeeCCEEEEEEeCCcEEE-ECcccccccCCCCCceeccCC---ceEEEecccceEEEEeCC-CCCCCCCCeEEEEEe
Q 037351 57 NHRFKIGDTLQFKYKKDSVMA-VTEVEYKKCRSSHPLFYSNNG---NTVYKLAKPGLFYFISGV-SGHCERGLKMIIKVL 131 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~hsV~~-V~~~~Y~~C~~s~pi~~~~~G---~~~v~L~~~G~~YFiCsv-~gHC~~GmKl~I~V~ 131 (178)
.-.+.+|+.++|..++.+|.. ..-.++. -......| ...++.++||.||+.|+. -|+--.+|+..|.|.
T Consensus 94 ~l~VP~G~~Vr~~vTS~DViHsf~IP~lg------ik~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPDVIHGFHVEGTN------INVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp SEEEETTSEEEEEEECSSSCEEEEETTSS------CEEEECTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEeCCCeEEEEEecCCceEEEEECCCC------eEEEecCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEEEEEEe
Confidence 347888888888887633321 1001110 01111123 346788999999999995 344445799999986
No 47
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=92.45 E-value=0.2 Score=38.38 Aligned_cols=73 Identities=19% Similarity=0.317 Sum_probs=44.2
Q ss_pred cceeeCCEEEEEEeC---C----------cEEEECcccccccCCCC-Cceec------c-CCceEEEec-----------
Q 037351 58 HRFKIGDTLQFKYKK---D----------SVMAVTEVEYKKCRSSH-PLFYS------N-NGNTVYKLA----------- 105 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~---h----------sV~~V~~~~Y~~C~~s~-pi~~~------~-~G~~~v~L~----------- 105 (178)
..+++||.|-+-=+. + .++.|++++|++|+... +...+ . .|..++++.
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~~~~kft~kFQ~FSP~p~G~ 101 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 101 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCCCCcEEEEeCCCCCCCCceEEEEEEEEcCCCCCCe
Confidence 367889999775432 1 36789999999999764 33322 1 233343321
Q ss_pred --ccc-eEEEEeCCCCCCCCC--CeEEEEEe
Q 037351 106 --KPG-LFYFISGVSGHCERG--LKMIIKVL 131 (178)
Q Consensus 106 --~~G-~~YFiCsv~gHC~~G--mKl~I~V~ 131 (178)
+|| .||||++ +.|=..+ +||+|.|.
T Consensus 102 EF~pG~~YY~ISt-~~~~~~~~cl~l~v~v~ 131 (132)
T 3hei_B 102 EFKEGHSYYYISK-PIHQHEDRCLRLKVTVK 131 (132)
T ss_dssp CCCTTCEEEEEEE-ESSCCCCSCCEEEEEEC
T ss_pred eecCCCcEEEEEc-cCCCCCCcceEEEEEEE
Confidence 477 6888886 3332222 68888774
No 48
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.48 E-value=0.24 Score=46.69 Aligned_cols=71 Identities=17% Similarity=0.224 Sum_probs=42.0
Q ss_pred ccceeeCCEEEEEEeCC----cEEE-ECcccccccCCCCCceeccCCceEEEecccceEEEEeCCCCCCCC---CCeEEE
Q 037351 57 NHRFKIGDTLQFKYKKD----SVMA-VTEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISGVSGHCER---GLKMII 128 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~h----sV~~-V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~gHC~~---GmKl~I 128 (178)
..++.+||.+.|..++. +|.. +.-.++. ..--+....+....++.++||.|||+|+. +|-. +|+..|
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IPslG---IK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~Hs~M~G~V 633 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHG---VSMEISPQQTSSITFVADKPGLHWYYCSW--FCHALHMEMVGRM 633 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---EEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTTCTTCEEEE
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEecCCC---ceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCCcccceEEE
Confidence 45789999999987651 2221 1111111 00000111222336788999999999997 5554 599999
Q ss_pred EEec
Q 037351 129 KVLE 132 (178)
Q Consensus 129 ~V~~ 132 (178)
.|.+
T Consensus 634 iVEP 637 (638)
T 3sbq_A 634 MVEP 637 (638)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9974
No 49
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=87.86 E-value=0.7 Score=38.94 Aligned_cols=76 Identities=14% Similarity=0.135 Sum_probs=46.0
Q ss_pred cceeeCCEEEEEEeC-------CcEEEECcccccccCCCCCceeccCCceEEEecccceEEEEeCCCC-----CCCCCCe
Q 037351 58 HRFKIGDTLQFKYKK-------DSVMAVTEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISGVSG-----HCERGLK 125 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~-------hsV~~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~g-----HC~~GmK 125 (178)
.+++.||+|++++.+ |.+..-...+.+.-..-..+....+-...++.+++|++||-|...+ |=..||.
T Consensus 66 i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~ 145 (333)
T 1mzy_A 66 MIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGGGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMA 145 (333)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCE
T ss_pred EEecCCCEEEEEEEECCCCcccccceecCCCCCCCCCceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCCE
Confidence 468999999998864 3443211111110010111222111223677789999999999864 6678999
Q ss_pred EEEEEecC
Q 037351 126 MIIKVLET 133 (178)
Q Consensus 126 l~I~V~~~ 133 (178)
..+.|...
T Consensus 146 G~~iV~~~ 153 (333)
T 1mzy_A 146 GCIMVLPR 153 (333)
T ss_dssp EEEEEECT
T ss_pred EEEEEccC
Confidence 99999754
No 50
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=85.64 E-value=1.1 Score=37.70 Aligned_cols=77 Identities=16% Similarity=0.154 Sum_probs=44.7
Q ss_pred cceeeCCEEEEEEeC-------CcEEEECcccccccCCCCCceeccCCceEEEecccceEEEEeCCCC----CCCCCCeE
Q 037351 58 HRFKIGDTLQFKYKK-------DSVMAVTEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISGVSG----HCERGLKM 126 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~-------hsV~~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~g----HC~~GmKl 126 (178)
.+++.||+|++++.+ |++..-.....+.=.....+....+-...++.+++|++||-|...+ |=..||..
T Consensus 67 i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~~~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G 146 (336)
T 1oe1_A 67 LVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSG 146 (336)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEE
T ss_pred EEEcCCCEEEEEEEcCCCCCccccceECCCCCCCCCcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCCCeE
Confidence 468899999988864 3333211100000000011222111123567789999999999754 45689999
Q ss_pred EEEEecCC
Q 037351 127 IIKVLETP 134 (178)
Q Consensus 127 ~I~V~~~~ 134 (178)
.+.|....
T Consensus 147 ~liV~~~~ 154 (336)
T 1oe1_A 147 TLMVLPRD 154 (336)
T ss_dssp EEEEECTT
T ss_pred EEEEecCc
Confidence 99998543
No 51
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=85.02 E-value=1.4 Score=36.53 Aligned_cols=78 Identities=13% Similarity=0.117 Sum_probs=46.7
Q ss_pred cceeeCCEEEEEEeC-----CcEEE--ECcccccccC--CCCCceeccCCceEEEecccceEEEEeCCC---CCCCCCCe
Q 037351 58 HRFKIGDTLQFKYKK-----DSVMA--VTEVEYKKCR--SSHPLFYSNNGNTVYKLAKPGLFYFISGVS---GHCERGLK 125 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~-----hsV~~--V~~~~Y~~C~--~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~---gHC~~GmK 125 (178)
.+++.||+++.++.+ |++.- +.....|.=. ...++....+-...++.+.+|++||-|-.. .|=..||.
T Consensus 68 i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~ 147 (288)
T 3gdc_A 68 LWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLY 147 (288)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCE
T ss_pred EEEeCCCEEEEEEEeCCCCcccEEeccccccccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcCe
Confidence 478999999999964 23221 1111111100 011222222222367788999999999886 35668999
Q ss_pred EEEEEecCCC
Q 037351 126 MIIKVLETPS 135 (178)
Q Consensus 126 l~I~V~~~~~ 135 (178)
-.+.|.....
T Consensus 148 G~liV~~~~~ 157 (288)
T 3gdc_A 148 GGFIVEPKEG 157 (288)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEeCCcc
Confidence 9999986544
No 52
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=79.02 E-value=2.2 Score=35.97 Aligned_cols=75 Identities=20% Similarity=0.267 Sum_probs=43.4
Q ss_pred cceeeCCEEEEEEeC-------CcEEE--ECcccccccCCCCCceeccCCceEEEecccceEEEEeCCC---CCCCCCCe
Q 037351 58 HRFKIGDTLQFKYKK-------DSVMA--VTEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISGVS---GHCERGLK 125 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~-------hsV~~--V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~---gHC~~GmK 125 (178)
.+++.||++++++.+ |++.- +.+.+-. - ....+....+-...++.+.+|++||-|... .|=..||.
T Consensus 72 i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG~-~-~~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~ 149 (327)
T 1kbv_A 72 IRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGG-A-AATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMY 149 (327)
T ss_dssp EEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGG-T-TTTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCE
T ss_pred EEEeCCCEEEEEEEECCCCCCceeeEeCccccCCCC-C-cceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcceE
Confidence 478999999998864 22211 1111100 0 001122211112356778999999999763 45567999
Q ss_pred EEEEEecCC
Q 037351 126 MIIKVLETP 134 (178)
Q Consensus 126 l~I~V~~~~ 134 (178)
..|.|....
T Consensus 150 G~~iV~~~~ 158 (327)
T 1kbv_A 150 GLILVEPKE 158 (327)
T ss_dssp EEEEEECTT
T ss_pred EEEEEecCC
Confidence 999998643
No 53
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=78.02 E-value=2.8 Score=35.21 Aligned_cols=77 Identities=16% Similarity=0.206 Sum_probs=44.8
Q ss_pred cceeeCCEEEEEEeC-------CcEEEECcccccccCCCCCceeccCCceEEEecccceEEEEeCCCC----CCCCCCeE
Q 037351 58 HRFKIGDTLQFKYKK-------DSVMAVTEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISGVSG----HCERGLKM 126 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~-------hsV~~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~g----HC~~GmKl 126 (178)
.+++.||++++++.+ |.+..-.....+.=..-..+....+-...++++++|++||-|...+ |=..||..
T Consensus 73 i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~~~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G 152 (340)
T 2bw4_A 73 MVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNG 152 (340)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEE
T ss_pred EEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCCCCccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCEE
Confidence 468899999998864 3333211100000000001211111123577788999999999764 56689999
Q ss_pred EEEEecCC
Q 037351 127 IIKVLETP 134 (178)
Q Consensus 127 ~I~V~~~~ 134 (178)
.+.|....
T Consensus 153 ~~iV~~~~ 160 (340)
T 2bw4_A 153 AIMVLPRD 160 (340)
T ss_dssp EEEEECTB
T ss_pred EEEEccCc
Confidence 99887543
No 54
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=77.49 E-value=12 Score=32.00 Aligned_cols=66 Identities=11% Similarity=0.258 Sum_probs=41.3
Q ss_pred ceeeCCEEEEEEeCCcEEEE-CcccccccCCCCCce-eccCC---ceEEEecccceEEEEeCCCCCCCC---CCeEEEEE
Q 037351 59 RFKIGDTLQFKYKKDSVMAV-TEVEYKKCRSSHPLF-YSNNG---NTVYKLAKPGLFYFISGVSGHCER---GLKMIIKV 130 (178)
Q Consensus 59 tF~VGDtLvF~y~~hsV~~V-~~~~Y~~C~~s~pi~-~~~~G---~~~v~L~~~G~~YFiCsv~gHC~~---GmKl~I~V 130 (178)
.+.+|+.++|.-++.+|..- .-.++ .++ ..--| ...++.++||.||..|+. -|-. .|++.|.|
T Consensus 192 vlP~g~~V~~~ltS~DViHsf~iP~l-------g~k~daiPG~~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~v 262 (298)
T 3hb3_B 192 VVPVGKKVLVQVTATDVIHAWTIPAF-------AVKQDAVPGRIAQLWFSVDQEGVYFGQCSE--LCGINHAYMPIVVKA 262 (298)
T ss_dssp EEESSSEEEEEEEESSSCEEEEEGGG-------TEEEEECTTCCEEEEEECSSSEEEEECCCS--CCSTTTTSCCEEEEE
T ss_pred EEEcCCEEEEEEEeCCccceeeEccc-------CceEEecCCceEEEEEEeCCCEEEEEEccc--ccCcCccCCeeEEEE
Confidence 57788888888886444321 10111 111 11122 235788999999999996 5554 59999998
Q ss_pred ecC
Q 037351 131 LET 133 (178)
Q Consensus 131 ~~~ 133 (178)
.+.
T Consensus 263 vs~ 265 (298)
T 3hb3_B 263 VSQ 265 (298)
T ss_dssp ECH
T ss_pred EcH
Confidence 854
No 55
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=76.32 E-value=3.6 Score=34.82 Aligned_cols=78 Identities=13% Similarity=0.140 Sum_probs=44.8
Q ss_pred ccceeeCCEEEEEEeC-----CcE-----EEECccccccc-CC-CCCceeccCCceEEEecccceEEEEeCCCC--CCC-
Q 037351 57 NHRFKIGDTLQFKYKK-----DSV-----MAVTEVEYKKC-RS-SHPLFYSNNGNTVYKLAKPGLFYFISGVSG--HCE- 121 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~-----hsV-----~~V~~~~Y~~C-~~-s~pi~~~~~G~~~v~L~~~G~~YFiCsv~g--HC~- 121 (178)
..+++.||++++++.+ +++ .+......|.= .. ..++....+-...++++++|++||-|.... |=.
T Consensus 36 ~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~ 115 (339)
T 2zwn_A 36 LIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGV 115 (339)
T ss_dssp EEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTT
T ss_pred eEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhhhc
Confidence 3478999999999874 122 22111001110 00 012322222234677888999999998754 444
Q ss_pred CCCeEEEEEecCC
Q 037351 122 RGLKMIIKVLETP 134 (178)
Q Consensus 122 ~GmKl~I~V~~~~ 134 (178)
.||...+.|....
T Consensus 116 ~Gl~G~liV~p~~ 128 (339)
T 2zwn_A 116 RGMWGPLIVDPKQ 128 (339)
T ss_dssp SCCEEEEEEECSS
T ss_pred CCceEeEEecCCC
Confidence 7998888887543
No 56
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=73.74 E-value=2.5 Score=36.82 Aligned_cols=75 Identities=21% Similarity=0.279 Sum_probs=43.2
Q ss_pred cceeeCCEEEEEEeC-------CcEEE--ECcccccccCCCCCceeccCCceEEEecccceEEEEeC---CCCCCCCCCe
Q 037351 58 HRFKIGDTLQFKYKK-------DSVMA--VTEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISG---VSGHCERGLK 125 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~-------hsV~~--V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCs---v~gHC~~GmK 125 (178)
.+++.||++++++.+ |++.- +... +.=....++....+-...|+.+.+|++||-|- ...|=..||.
T Consensus 62 i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~--dG~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~ 139 (442)
T 2zoo_A 62 IRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGP--GGGAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMY 139 (442)
T ss_dssp EEEETTCEEEEEEEECTTCSSCBCCEETTCCSG--GGGGGGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCE
T ss_pred EEEeCCCEEEEEEEECCCCCCCCCEEecCCcCC--CCCCccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCccE
Confidence 478899999998854 22221 1110 10000011222111123567788999999994 3456678999
Q ss_pred EEEEEecCC
Q 037351 126 MIIKVLETP 134 (178)
Q Consensus 126 l~I~V~~~~ 134 (178)
..+.|....
T Consensus 140 G~~iv~~~~ 148 (442)
T 2zoo_A 140 GLILVEPKE 148 (442)
T ss_dssp EEEEEECTT
T ss_pred EEEEEeCCC
Confidence 999998543
No 57
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=70.22 E-value=8.1 Score=32.86 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=29.5
Q ss_pred cccceEEEEeCCCCCCCCCCeEEEEEecCCCCCC
Q 037351 105 AKPGLFYFISGVSGHCERGLKMIIKVLETPSPFP 138 (178)
Q Consensus 105 ~~~G~~YFiCsv~gHC~~GmKl~I~V~~~~~~p~ 138 (178)
+.||.++|-|-+..|=..||...+.|......+|
T Consensus 279 ~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~P 312 (343)
T 3cg8_A 279 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIP 312 (343)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTSCCS
T ss_pred CCCeeEEEeCCCHHHHhccCcEEEEEecCCCCCC
Confidence 5799999999999999999999999987765544
No 58
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=69.84 E-value=4.6 Score=33.82 Aligned_cols=36 Identities=22% Similarity=0.318 Sum_probs=30.7
Q ss_pred EEEecccceEEEEeCCCCCC-CCCCeEEEEEecCCCC
Q 037351 101 VYKLAKPGLFYFISGVSGHC-ERGLKMIIKVLETPSP 136 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC-~~GmKl~I~V~~~~~~ 136 (178)
.++.++||.|+|.|....|+ ..||...+.|.....+
T Consensus 286 lv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~ 322 (336)
T 1oe1_A 286 LYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWND 322 (336)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred EEEcCCCceEEEEechhhccccCCCeEEEEECCCCCh
Confidence 56778899999999988898 8999999999865544
No 59
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=69.06 E-value=21 Score=30.57 Aligned_cols=68 Identities=18% Similarity=0.195 Sum_probs=42.7
Q ss_pred ccceeeCCEEEEEEeCCcEEE---ECcccccccCCCCCceeccCCceEEEecccceEEEEeCCCCCCCC---CCeEEEEE
Q 037351 57 NHRFKIGDTLQFKYKKDSVMA---VTEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISGVSGHCER---GLKMIIKV 130 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~hsV~~---V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~gHC~~---GmKl~I~V 130 (178)
.-.+.+|..++|+-++.+|.. |.+-+-+ .+. -.+......++.++||.||..|+. -|-. .|++.|.|
T Consensus 152 ~l~lP~g~~V~~~lTS~DViHsf~IP~lg~k-~Da----iPGr~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~v 224 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQ-IYA----MAGMQTRLHLIANEPGTYDGISAS--YSGPGFSGMKFKAIA 224 (315)
T ss_dssp BCCCCSSSEEEEEECBSSSCEEEEEGGGTEE-EEE----CBTSCEEEEEECCSCBCCEEBCCS--CCSTTTTTCCEECCB
T ss_pred eEEEeCCCEEEEEEEeCCccceeeecccCcE-Eee----cCCcceeeEEecCCCeEEEEeccc--cchhhHHhccceEEE
Confidence 347899999999998755532 2111000 010 011112235788999999999985 6664 49999888
Q ss_pred e
Q 037351 131 L 131 (178)
Q Consensus 131 ~ 131 (178)
.
T Consensus 225 v 225 (315)
T 1fft_B 225 T 225 (315)
T ss_dssp C
T ss_pred e
Confidence 7
No 60
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=68.99 E-value=5.1 Score=33.54 Aligned_cols=36 Identities=17% Similarity=0.324 Sum_probs=30.8
Q ss_pred EEEecccceEEEEeCCCCCC-CCCCeEEEEEecCCCC
Q 037351 101 VYKLAKPGLFYFISGVSGHC-ERGLKMIIKVLETPSP 136 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC-~~GmKl~I~V~~~~~~ 136 (178)
.++.+.||.++|.|-...|+ +.||.-.++|.....+
T Consensus 286 ~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~~ 322 (333)
T 1mzy_A 286 LYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEWDN 322 (333)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCCEEEEEEESCCCT
T ss_pred EEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCCCCc
Confidence 56778899999999999999 9999999999865544
No 61
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=67.81 E-value=4.1 Score=34.31 Aligned_cols=77 Identities=12% Similarity=0.127 Sum_probs=44.2
Q ss_pred cceeeCCEEEEEEeC-----CcEEE--ECc---cccccc-C-CCCCceeccCCceEEEecccceEEEEeCCCCC-C--CC
Q 037351 58 HRFKIGDTLQFKYKK-----DSVMA--VTE---VEYKKC-R-SSHPLFYSNNGNTVYKLAKPGLFYFISGVSGH-C--ER 122 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~-----hsV~~--V~~---~~Y~~C-~-~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~gH-C--~~ 122 (178)
.+++.||+|+.++.+ +++.- +.. ...|.= . ...++....+-...++.+++|++||-|..... . ..
T Consensus 36 i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~ 115 (318)
T 3g5w_A 36 IHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMR 115 (318)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHS
T ss_pred EEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccC
Confidence 478999999999975 23321 111 111110 0 01123222222336778899999999987422 1 26
Q ss_pred CCeEEEEEecCC
Q 037351 123 GLKMIIKVLETP 134 (178)
Q Consensus 123 GmKl~I~V~~~~ 134 (178)
||...+.|....
T Consensus 116 Gl~G~lIV~~~~ 127 (318)
T 3g5w_A 116 GMWGPLIVEPKN 127 (318)
T ss_dssp CCEEEEEEECSS
T ss_pred CCEEEEEEcCCC
Confidence 999888887543
No 62
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=64.03 E-value=28 Score=28.26 Aligned_cols=30 Identities=17% Similarity=0.517 Sum_probs=24.6
Q ss_pred EEEecccceEEEEeCCCCCCCCC---CeEEEEEec
Q 037351 101 VYKLAKPGLFYFISGVSGHCERG---LKMIIKVLE 132 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC~~G---mKl~I~V~~ 132 (178)
.++.++||.||..|+. -|-.| |.+.|.|.+
T Consensus 183 ~~~~~~~G~y~g~Cse--~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 183 TLMSSRPGLYYGQCSE--ICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EECCSSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEecCCcEEEEEEehh--hcccccccCeEEEEEEc
Confidence 5778999999999985 67655 899888874
No 63
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=63.49 E-value=13 Score=33.42 Aligned_cols=77 Identities=12% Similarity=0.119 Sum_probs=48.0
Q ss_pred cceeeCCEEEEEEeCC------cEE----EECccc-cccc-CC-CCCceeccCCceEEEecccceEEEEeCCCCCCCCCC
Q 037351 58 HRFKIGDTLQFKYKKD------SVM----AVTEVE-YKKC-RS-SHPLFYSNNGNTVYKLAKPGLFYFISGVSGHCERGL 124 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~h------sV~----~V~~~~-Y~~C-~~-s~pi~~~~~G~~~v~L~~~G~~YFiCsv~gHC~~Gm 124 (178)
.+++.||+|+.++.++ ++. .+.... .|.= .. ..++....+=...++++.+|++||-|-...+=..||
T Consensus 36 I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl 115 (552)
T 1aoz_A 36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGL 115 (552)
T ss_dssp EEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTC
T ss_pred EEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhccC
Confidence 4789999999998741 221 111111 1110 00 012332222224677889999999999988888899
Q ss_pred eEEEEEecCC
Q 037351 125 KMIIKVLETP 134 (178)
Q Consensus 125 Kl~I~V~~~~ 134 (178)
...+.|....
T Consensus 116 ~G~liV~~~~ 125 (552)
T 1aoz_A 116 YGSLIVDPPQ 125 (552)
T ss_dssp EEEEEEECCT
T ss_pred eeeEEEeCCc
Confidence 9999998754
No 64
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=60.61 E-value=3.9 Score=28.91 Aligned_cols=23 Identities=30% Similarity=0.556 Sum_probs=17.7
Q ss_pred cccceeeCCEEEEEEeCCcEEEE
Q 037351 56 SNHRFKIGDTLQFKYKKDSVMAV 78 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~hsV~~V 78 (178)
..+..++||.|+|++...+...|
T Consensus 74 ~~~~L~~GD~lvF~~~~~~~f~V 96 (104)
T 1yel_A 74 KDNNLEDGKYLQFIYDRDRTFYV 96 (104)
T ss_dssp HHHTCCTTCEEEEEECSSSEEEE
T ss_pred HHcCCCCCCEEEEEEcCCCeEEE
Confidence 45789999999999987554433
No 65
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=59.96 E-value=15 Score=33.22 Aligned_cols=77 Identities=14% Similarity=0.218 Sum_probs=47.7
Q ss_pred cceeeCCEEEEEEeCC------c-----EEEECcccccc-cCC-CCCceeccCCceEEEec-ccceEEEEeCCCCCCCCC
Q 037351 58 HRFKIGDTLQFKYKKD------S-----VMAVTEVEYKK-CRS-SHPLFYSNNGNTVYKLA-KPGLFYFISGVSGHCERG 123 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~h------s-----V~~V~~~~Y~~-C~~-s~pi~~~~~G~~~v~L~-~~G~~YFiCsv~gHC~~G 123 (178)
.+++.||+|+.++.++ + +.+-.....|. -.. ..++....+=...++++ .+|++||-|-...|=..|
T Consensus 36 i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~G 115 (534)
T 1zpu_A 36 ITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDG 115 (534)
T ss_dssp EEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGT
T ss_pred EEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccCc
Confidence 4789999999999751 1 11110011111 000 01233222222367777 899999999998888889
Q ss_pred CeEEEEEecCC
Q 037351 124 LKMIIKVLETP 134 (178)
Q Consensus 124 mKl~I~V~~~~ 134 (178)
|...+.|....
T Consensus 116 l~G~liV~~~~ 126 (534)
T 1zpu_A 116 MKGLFIIKDDS 126 (534)
T ss_dssp CEEEEEEECTT
T ss_pred ceeeEEeCCCC
Confidence 99999998654
No 66
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=59.50 E-value=17 Score=33.40 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=29.3
Q ss_pred eEEEecccceEEEEeCCCCCCCCCCeEEEEEecC
Q 037351 100 TVYKLAKPGLFYFISGVSGHCERGLKMIIKVLET 133 (178)
Q Consensus 100 ~~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~~~ 133 (178)
..++++++|++||-|-.+.+=..|+...|.|...
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p 188 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGP 188 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCc
Confidence 3678889999999999988888899999999854
No 67
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=58.88 E-value=14 Score=33.39 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=46.8
Q ss_pred cceeeCCEEEEEEeC------CcEE----EEC-cccccc-cCC-CCCcee-ccCCceEEEecccceEEEEeCCCCCCCCC
Q 037351 58 HRFKIGDTLQFKYKK------DSVM----AVT-EVEYKK-CRS-SHPLFY-SNNGNTVYKLAKPGLFYFISGVSGHCERG 123 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~------hsV~----~V~-~~~Y~~-C~~-s~pi~~-~~~G~~~v~L~~~G~~YFiCsv~gHC~~G 123 (178)
.+++.||+|+.++.+ +++. .+. ....|. -.. ..++.. ..+-...++++.+|++||-|-...|=..|
T Consensus 69 i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~G 148 (559)
T 2q9o_A 69 IVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNG 148 (559)
T ss_dssp EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGT
T ss_pred EEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcCC
Confidence 368899999999864 1221 111 111111 000 012222 22223467888999999999998888889
Q ss_pred CeEEEEEecC
Q 037351 124 LKMIIKVLET 133 (178)
Q Consensus 124 mKl~I~V~~~ 133 (178)
|...+.|...
T Consensus 149 l~G~liV~~~ 158 (559)
T 2q9o_A 149 VVGTIQINGP 158 (559)
T ss_dssp CEEEEEEECC
T ss_pred ceEEEEecCC
Confidence 9999999853
No 68
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=52.78 E-value=5.7 Score=32.76 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=28.3
Q ss_pred EEEecccceEEEEeCCCCCCCCCCeEEEEEec
Q 037351 101 VYKLAKPGLFYFISGVSGHCERGLKMIIKVLE 132 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~~ 132 (178)
.+..+.||.+.|.|-+..|=+.||...++|.+
T Consensus 257 ~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 257 ELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 45567899999999999999999999999864
No 69
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=52.76 E-value=23 Score=29.45 Aligned_cols=31 Identities=19% Similarity=0.251 Sum_probs=22.3
Q ss_pred cccceEEEEeCCCCC------CCCCCeEEEEEecCCC
Q 037351 105 AKPGLFYFISGVSGH------CERGLKMIIKVLETPS 135 (178)
Q Consensus 105 ~~~G~~YFiCsv~gH------C~~GmKl~I~V~~~~~ 135 (178)
...|++||-|-+.+. =..||...|.|.....
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~ 149 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD 149 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEeecccc
Confidence 355899999977543 2369999999986544
No 70
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=50.90 E-value=9.2 Score=31.29 Aligned_cols=33 Identities=18% Similarity=0.381 Sum_probs=28.7
Q ss_pred ccceEEEEeCCCCCCCCCCeEEEEEecCCCCCC
Q 037351 106 KPGLFYFISGVSGHCERGLKMIIKVLETPSPFP 138 (178)
Q Consensus 106 ~~G~~YFiCsv~gHC~~GmKl~I~V~~~~~~p~ 138 (178)
.||.++|-|-+..|=..||...+.|.....+.|
T Consensus 239 npG~w~~HCH~~~H~~~GM~g~~~V~~~~~~~p 271 (276)
T 3kw8_A 239 GAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIP 271 (276)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTTSCCT
T ss_pred CCCeEEEECCCchHhhCCCeEEEEEeCCCCCCC
Confidence 599999999999999999999999987765433
No 71
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=50.85 E-value=15 Score=29.71 Aligned_cols=68 Identities=18% Similarity=0.154 Sum_probs=41.1
Q ss_pred cceeeCCEEEEEEeCCcEEEE-Ccccccc-cCCCCCceeccCCceEEEecccceEEEEeCCCCCCCC---CCeEEEEEe
Q 037351 58 HRFKIGDTLQFKYKKDSVMAV-TEVEYKK-CRSSHPLFYSNNGNTVYKLAKPGLFYFISGVSGHCER---GLKMIIKVL 131 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~hsV~~V-~~~~Y~~-C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~gHC~~---GmKl~I~V~ 131 (178)
-.+.+|+.++|.-++.+|..- .-.++.. .+.- ........+..+++|.||..|+. -|-. .|++.|.|.
T Consensus 43 l~lP~g~~V~~~lTS~DViHSF~IP~lgvK~dai----PGr~n~l~~~~~~pG~y~g~CsE--~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 43 IAFPANTPVYFKVTSNSVMHSFFIPRLGSQIYAM----AGMQTRLHLIANEPGTYDGICAE--ICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEEETTSCEEEEEEESSSCEEEEEGGGTEEEEEC----TTCCEEEEECCSSSEEEEEEECS--CCSTTSTTCCEEEEEE
T ss_pred EEEeCCCEEEEEEecCCceeeEEecccCcEEEec----CCceEEEEEEeCCCeEEEEEccc--ccccchhhceEEEEEE
Confidence 467889999999887544321 0011110 1100 11112235678999999999986 5554 599999988
No 72
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=50.71 E-value=20 Score=29.19 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=43.8
Q ss_pred ceeeCCEEEEEEeC-----CcEEE----ECcccccccCC-CCCceeccCCceEEEecc-------------cceEEEEeC
Q 037351 59 RFKIGDTLQFKYKK-----DSVMA----VTEVEYKKCRS-SHPLFYSNNGNTVYKLAK-------------PGLFYFISG 115 (178)
Q Consensus 59 tF~VGDtLvF~y~~-----hsV~~----V~~~~Y~~C~~-s~pi~~~~~G~~~v~L~~-------------~G~~YFiCs 115 (178)
+++.||+|+.++.+ +++.- +.. ..|.-.. ..++....+-...+++++ +|++||-|-
T Consensus 39 ~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~-~~DG~~~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h 117 (276)
T 3kw8_A 39 EVNEGDTLHIEFTNTMDVRASLHVHGLDYEI-SSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDH 117 (276)
T ss_dssp EEETTCEEEEEEEECSSSCBCCEESSSBCCG-GGSCCTTTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECS
T ss_pred EEECCCEEEEEEEECCCCCccEeecCcccCC-ccCCCcCCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecC
Confidence 68999999999975 12211 111 1111111 112322222223566653 488999998
Q ss_pred CCC------CCCCCCeEEEEEecCCCC
Q 037351 116 VSG------HCERGLKMIIKVLETPSP 136 (178)
Q Consensus 116 v~g------HC~~GmKl~I~V~~~~~~ 136 (178)
..+ |=..||--.+.|......
T Consensus 118 ~~~~~~~~~~~~~Gl~G~liV~~~~~~ 144 (276)
T 3kw8_A 118 VVGTEHGTGGIRNGLYGPVIVRRKGDV 144 (276)
T ss_dssp SSSSTTCHHHHHHTCEEEEEEECTTCC
T ss_pred ccccccchhhhhCccEEEEEEecCCCc
Confidence 754 345799999999866543
No 73
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=49.08 E-value=41 Score=27.77 Aligned_cols=31 Identities=16% Similarity=0.204 Sum_probs=21.6
Q ss_pred ccceEEEEeCCCCC------CCCCCeEEEEEecCCCC
Q 037351 106 KPGLFYFISGVSGH------CERGLKMIIKVLETPSP 136 (178)
Q Consensus 106 ~~G~~YFiCsv~gH------C~~GmKl~I~V~~~~~~ 136 (178)
..|++||-|-..+. =..||.-.+.|.....+
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~ 166 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL 166 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEeccccc
Confidence 46999999965432 23599999999865443
No 74
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=48.98 E-value=9.5 Score=37.48 Aligned_cols=74 Identities=11% Similarity=0.017 Sum_probs=49.8
Q ss_pred ccceeeCCEEEEEEeC-------CcEEEE------CcccccccCCCCCceeccCCceEEEecccceEEEEeCCCCCCCCC
Q 037351 57 NHRFKIGDTLQFKYKK-------DSVMAV------TEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISGVSGHCERG 123 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~-------hsV~~V------~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~gHC~~G 123 (178)
..++..||+|+.+-.. |++.+- +...+++|... ...+-...++.+.+|++|+-|-++.|=..|
T Consensus 633 ~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~----pg~~~t~~~~~~~~Gt~~~h~h~~~~~~~G 708 (1065)
T 2j5w_A 633 GLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANLF----PQTSLTLHMWPDTEGTFNVECLTTDHYTGG 708 (1065)
T ss_dssp CCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESEEEEC----TTCEEEEEECCCSCEEEEEEECSHHHHHTT
T ss_pred ceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecceEeec----CCceEEEEEecCCCeEEEEecCCCcccCCC
Confidence 3479999999988753 344332 12223444422 212222356677899999999999999999
Q ss_pred CeEEEEEecCC
Q 037351 124 LKMIIKVLETP 134 (178)
Q Consensus 124 mKl~I~V~~~~ 134 (178)
|+..+.|....
T Consensus 709 m~g~~~V~~~~ 719 (1065)
T 2j5w_A 709 MKQKYTVNQCR 719 (1065)
T ss_dssp CEEEEEEECCS
T ss_pred cEEEEEEcCCc
Confidence 99999997653
No 75
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=48.85 E-value=16 Score=30.43 Aligned_cols=67 Identities=13% Similarity=0.244 Sum_probs=41.1
Q ss_pred ceeeCCEEEEEEeCCcEEE---ECcccccccCCCCCceeccCCceEEEecccceEEEEeCCCCCCCCC---CeEEEEEec
Q 037351 59 RFKIGDTLQFKYKKDSVMA---VTEVEYKKCRSSHPLFYSNNGNTVYKLAKPGLFYFISGVSGHCERG---LKMIIKVLE 132 (178)
Q Consensus 59 tF~VGDtLvF~y~~hsV~~---V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~~G~~YFiCsv~gHC~~G---mKl~I~V~~ 132 (178)
.+.+|+.++|.-++.+|.. +.+-+-+ .+. ..+......++.++||.||..|+. -|-.| |++.|.|.+
T Consensus 174 ~lP~g~~v~~~~tS~DViHsf~ip~l~~k-~da----~PG~~n~~~~~~~~~G~y~g~Cse--~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 174 VVPVNKTVVVQVTGADVIHSWTVPAFGVK-QDA----VPGRLAQLWFRAEREGIFFGQCSE--LCGISHAYMPITVKVVS 246 (262)
T ss_dssp EEETTSEEEEEEEESSSCEEEEEGGGTEE-EEE----CBTCCEEEEEECCSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEecCCEEEEEEEECcccceeeecccCce-EEe----cCCceeEEEEecCCcEEEEEEChH--hcccCcccCeEEEEEEc
Confidence 5788888888887654432 1111000 000 011112236788999999999995 66654 999998874
No 76
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=48.50 E-value=16 Score=33.43 Aligned_cols=71 Identities=15% Similarity=0.317 Sum_probs=45.7
Q ss_pred cceeeCCEEEEEEeCCcE----EE-ECcccccccCCCCCceeccC--CceEEEecccceEEEEeCCCCCCCCCC-eEEEE
Q 037351 58 HRFKIGDTLQFKYKKDSV----MA-VTEVEYKKCRSSHPLFYSNN--GNTVYKLAKPGLFYFISGVSGHCERGL-KMIIK 129 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~hsV----~~-V~~~~Y~~C~~s~pi~~~~~--G~~~v~L~~~G~~YFiCsv~gHC~~Gm-Kl~I~ 129 (178)
.-++-|-.|+|.=-.++| +. .+-.....|...- ..++. =+.+..| +||.|||..+...-|++|- ++.|.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (491)
T 3l6w_A 413 VVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPP--FSFHAFELGKMYSV-ESGDYFMTASTTELCNDNNLRIHVH 489 (491)
T ss_pred eEeecCCEEEEEecccchhhHHHhhhhhhhhhccccCC--CccCcccccceEec-CCCceEecCChHHHHhCCceeEEEE
Confidence 357788888886544333 22 2444556688642 11111 1124445 5899999999999999997 89888
Q ss_pred Ee
Q 037351 130 VL 131 (178)
Q Consensus 130 V~ 131 (178)
|.
T Consensus 490 ~~ 491 (491)
T 3l6w_A 490 VD 491 (491)
T ss_pred eC
Confidence 73
No 77
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=48.17 E-value=5.1 Score=28.43 Aligned_cols=33 Identities=12% Similarity=0.397 Sum_probs=15.5
Q ss_pred cccceEEEEeCCC--CCCCCCCeEEEEEecCCCCCCCC
Q 037351 105 AKPGLFYFISGVS--GHCERGLKMIIKVLETPSPFPYQ 140 (178)
Q Consensus 105 ~~~G~~YFiCsv~--gHC~~GmKl~I~V~~~~~~p~~~ 140 (178)
...|.|| |.+. ++ ..+.++.+.|...+.+|.++
T Consensus 85 ~Dsg~Y~--C~~~~~~~-~~~~~v~L~V~~~~~~~~~~ 119 (124)
T 2nms_A 85 TDADTYW--CGIEKTGN-DLGVTVQVTIDPAPVTQEET 119 (124)
T ss_dssp GGCEEEE--EEEEETTE-EEEEEEEEEEECCC------
T ss_pred HHCEEEE--EEEEcCCC-CccEEEEEEEeCCCcCCCCc
Confidence 3456655 6653 22 34556777777665554433
No 78
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=46.84 E-value=2.8 Score=35.00 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=20.4
Q ss_pred EEEecccceEEEEeCCCCCCCCCCeEEEEEec
Q 037351 101 VYKLAKPGLFYFISGVSGHCERGLKMIIKVLE 132 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~~ 132 (178)
.++.+.+|.++|.|-+..|-..||...+.|..
T Consensus 269 ~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 269 NMTVSPEGRWTIASLIPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp -------CCCCCBCCSTTTGGGTCBCCC----
T ss_pred EEEcCCCeEEEEEeCChHHHhcCCeEEEEEec
Confidence 56678899999999999999999999998874
No 79
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=46.32 E-value=35 Score=30.53 Aligned_cols=36 Identities=14% Similarity=0.308 Sum_probs=29.5
Q ss_pred eEEEe-cccceEEEEeCCCCCCCCCCeEEEEEecCCC
Q 037351 100 TVYKL-AKPGLFYFISGVSGHCERGLKMIIKVLETPS 135 (178)
Q Consensus 100 ~~v~L-~~~G~~YFiCsv~gHC~~GmKl~I~V~~~~~ 135 (178)
..+++ +++|++||-|-...+=..|+...+.|.....
T Consensus 96 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~ 132 (495)
T 3t6v_A 96 YNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPND 132 (495)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred EEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccc
Confidence 35777 6799999999998887889999999975543
No 80
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=43.85 E-value=40 Score=30.20 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=29.4
Q ss_pred eEEEe-cccceEEEEeCCCCCCCCCCeEEEEEecCCC
Q 037351 100 TVYKL-AKPGLFYFISGVSGHCERGLKMIIKVLETPS 135 (178)
Q Consensus 100 ~~v~L-~~~G~~YFiCsv~gHC~~GmKl~I~V~~~~~ 135 (178)
..+++ +.+|++||-|-...+=..|+...+.|.....
T Consensus 95 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~ 131 (499)
T 3pxl_A 95 YDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPND 131 (499)
T ss_dssp EEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred EEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcc
Confidence 35677 6799999999998887889999999975543
No 81
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=43.78 E-value=18 Score=30.33 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=28.4
Q ss_pred EEEecccceEEEEeCCCCCC-CCCCeEEEEEecCC
Q 037351 101 VYKLAKPGLFYFISGVSGHC-ERGLKMIIKVLETP 134 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC-~~GmKl~I~V~~~~ 134 (178)
.++.+.+|.+++.|....|| ..||...+.+....
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 56678899999999999998 78998888887544
No 82
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=43.21 E-value=13 Score=32.69 Aligned_cols=75 Identities=13% Similarity=0.163 Sum_probs=45.9
Q ss_pred cceeeCCEEEEEEeC-----CcEE----EECcccccccCCCCCceeccCCceEEEecc-cceEEEEeCC----CCCCCCC
Q 037351 58 HRFKIGDTLQFKYKK-----DSVM----AVTEVEYKKCRSSHPLFYSNNGNTVYKLAK-PGLFYFISGV----SGHCERG 123 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~-----hsV~----~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~-~G~~YFiCsv----~gHC~~G 123 (178)
.+++.||+|+.++.+ +++. .+.. +.|. .+..++....+=...++++. +|++||-|-. ..|=..|
T Consensus 52 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~-~~DG-~~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~G 129 (451)
T 2uxt_A 52 IRVWKGDDVKLIYSNRLTENVSMTVAGLQVPG-PLMG-GPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNG 129 (451)
T ss_dssp EEEETTCEEEEEEEECSSSCBCEEEETCCCCG-GGSC-SGGGCBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTT
T ss_pred EEEeCCCEEEEEEEECCCCCccEEECCccCCC-CCCC-CCcCcCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhc
Confidence 368999999999975 2332 1111 1121 00112322222234688886 9999999987 3455689
Q ss_pred CeEEEEEecCC
Q 037351 124 LKMIIKVLETP 134 (178)
Q Consensus 124 mKl~I~V~~~~ 134 (178)
|-..+.|....
T Consensus 130 l~G~liV~~~~ 140 (451)
T 2uxt_A 130 LAGMWLVEDEV 140 (451)
T ss_dssp CEEEEEEECHH
T ss_pred ceEEEEEecCc
Confidence 99999998654
No 83
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=42.60 E-value=14 Score=35.26 Aligned_cols=30 Identities=20% Similarity=0.121 Sum_probs=24.7
Q ss_pred ccceEEEEeCCCC--CCCCCCeEEEEEecCCC
Q 037351 106 KPGLFYFISGVSG--HCERGLKMIIKVLETPS 135 (178)
Q Consensus 106 ~~G~~YFiCsv~g--HC~~GmKl~I~V~~~~~ 135 (178)
.+|++||-|.+.. |...||...|.|.....
T Consensus 269 ~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~~ 300 (770)
T 2r7e_B 269 DCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNT 300 (770)
T ss_dssp SEEEEEECCCSSSSHHHHTSCCEEEEEECSTT
T ss_pred CCeeEEeeccCCcHHHHhCCceeeEEECCCcc
Confidence 6799999998876 67799999998886543
No 84
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=42.01 E-value=29 Score=28.89 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=28.4
Q ss_pred EEEecccceEEEEeCCCC-CCCCCCeEEEEEecCCCC
Q 037351 101 VYKLAKPGLFYFISGVSG-HCERGLKMIIKVLETPSP 136 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~g-HC~~GmKl~I~V~~~~~~ 136 (178)
.+..+.||.++|.|.... |=..||...+.|.....+
T Consensus 292 ~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~~ 328 (340)
T 2bw4_A 292 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWND 328 (340)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred EEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCch
Confidence 466788999999999873 657899999999865443
No 85
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=41.65 E-value=13 Score=30.85 Aligned_cols=34 Identities=21% Similarity=0.498 Sum_probs=29.5
Q ss_pred cccceEEEEeCCCCCCCCCCeEEEEEecCCCCCC
Q 037351 105 AKPGLFYFISGVSGHCERGLKMIIKVLETPSPFP 138 (178)
Q Consensus 105 ~~~G~~YFiCsv~gHC~~GmKl~I~V~~~~~~p~ 138 (178)
+.||.+.|-|-+..|=+.||...++|.....++|
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~~~P 293 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADGTMP 293 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTSCCC
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCCCCC
Confidence 4589999999999999999999999987766544
No 86
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=41.28 E-value=11 Score=26.51 Aligned_cols=14 Identities=36% Similarity=0.831 Sum_probs=11.2
Q ss_pred cceeeCCEEEEE-Ee
Q 037351 58 HRFKIGDTLQFK-YK 71 (178)
Q Consensus 58 ~tF~VGDtLvF~-y~ 71 (178)
+.|++||.|+|+ |.
T Consensus 36 r~~~vGD~l~l~E~~ 50 (83)
T 3iuw_A 36 RNFQVGDILILEEYM 50 (83)
T ss_dssp SCCCTTCEEEEEEEE
T ss_pred cCCCCCCEEEEEEcc
Confidence 459999999995 53
No 87
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=40.63 E-value=16 Score=25.00 Aligned_cols=16 Identities=25% Similarity=0.569 Sum_probs=14.0
Q ss_pred ccceeeCCEEEEEEeC
Q 037351 57 NHRFKIGDTLQFKYKK 72 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~ 72 (178)
-..+++||.+.|.+..
T Consensus 51 l~~lk~Gd~V~F~~~~ 66 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQ 66 (80)
T ss_dssp ECCCCTTCEEEEEEEE
T ss_pred hhcCCCCCEEEEEEEE
Confidence 4579999999999985
No 88
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=39.68 E-value=16 Score=25.39 Aligned_cols=20 Identities=20% Similarity=0.413 Sum_probs=15.9
Q ss_pred ccccccceeeCCEEEEEEeC
Q 037351 53 KWASNHRFKIGDTLQFKYKK 72 (178)
Q Consensus 53 ~WA~~~tF~VGDtLvF~y~~ 72 (178)
+.+.-..+++||.|.|.+..
T Consensus 55 ~~~~l~~lk~Gd~V~F~~~~ 74 (88)
T 2vb2_X 55 PQTKMSEIKTGDKVAFNFVQ 74 (88)
T ss_dssp TTCEECCCCTTCEEEEEEEE
T ss_pred ChhhhhcCCCCCEEEEEEEE
Confidence 34445689999999999985
No 89
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=37.56 E-value=49 Score=27.24 Aligned_cols=27 Identities=15% Similarity=0.011 Sum_probs=21.1
Q ss_pred ceEEEEeCCCC--CCCCCCeEEEEEecCC
Q 037351 108 GLFYFISGVSG--HCERGLKMIIKVLETP 134 (178)
Q Consensus 108 G~~YFiCsv~g--HC~~GmKl~I~V~~~~ 134 (178)
|++||-|-... +-..||.-.+.|....
T Consensus 140 GT~wYHsH~~~~~q~~~GL~G~liV~~~~ 168 (306)
T 1sdd_A 140 LTHIYYSYVNLVEDFNSGLIGPLLICKKG 168 (306)
T ss_dssp EEEEEECCSSSHHHHHTTCCEEEEEECTT
T ss_pred eEEEEeccCCchhhhccCceEEEEEccCC
Confidence 79999998654 5568998888887553
No 90
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=37.51 E-value=11 Score=33.15 Aligned_cols=77 Identities=13% Similarity=0.162 Sum_probs=45.5
Q ss_pred cceeeCCEEEEEEeC-----CcEE----EECcccccccCCCCCceeccCCceEEEec-ccceEEEEeC----CCCCCCCC
Q 037351 58 HRFKIGDTLQFKYKK-----DSVM----AVTEVEYKKCRSSHPLFYSNNGNTVYKLA-KPGLFYFISG----VSGHCERG 123 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~-----hsV~----~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~-~~G~~YFiCs----v~gHC~~G 123 (178)
.+++.||+|+.++.+ .++. .+.. ..|.= +..++....+=...++++ .+|++||-|- ...+=..|
T Consensus 40 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~-~~DG~-~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~G 117 (448)
T 3aw5_A 40 IILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW-HNDAH-PSFAITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMG 117 (448)
T ss_dssp EEEETTCEEEEEEEECSSSCBCEEEETCCCCH-HHHTC-GGGCBCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTT
T ss_pred EEEeCCCEEEEEEEECCCCceeEEeCCccCCC-ccCCC-CCccCCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhcc
Confidence 368999999999975 1232 1111 11110 001232221112367777 7999999998 33455689
Q ss_pred CeEEEEEecCCCC
Q 037351 124 LKMIIKVLETPSP 136 (178)
Q Consensus 124 mKl~I~V~~~~~~ 136 (178)
|-..+.|......
T Consensus 118 l~G~liV~~~~~~ 130 (448)
T 3aw5_A 118 QLGLVIVEDSGSD 130 (448)
T ss_dssp CCEEEEEECTTTT
T ss_pred ceEEEEEeCCccc
Confidence 9999999865543
No 91
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=35.21 E-value=33 Score=29.61 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=29.3
Q ss_pred EEEecccceEEEEeCCCCCC-CCCCeEEEEEecCCC
Q 037351 101 VYKLAKPGLFYFISGVSGHC-ERGLKMIIKVLETPS 135 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC-~~GmKl~I~V~~~~~ 135 (178)
.++.+++|.|++.|....|+ ..||...+.|.....
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 46778899999999998887 789988888876654
No 92
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=35.01 E-value=26 Score=34.35 Aligned_cols=77 Identities=12% Similarity=0.102 Sum_probs=49.7
Q ss_pred ccceeeCCEEEEEEeC---C-cE--EEECcccccccCCCCCce----eccCC---ceEEEecccceEEEEeCCCCCCCCC
Q 037351 57 NHRFKIGDTLQFKYKK---D-SV--MAVTEVEYKKCRSSHPLF----YSNNG---NTVYKLAKPGLFYFISGVSGHCERG 123 (178)
Q Consensus 57 ~~tF~VGDtLvF~y~~---h-sV--~~V~~~~Y~~C~~s~pi~----~~~~G---~~~v~L~~~G~~YFiCsv~gHC~~G 123 (178)
..+++.|++++|+.-+ . .. +.+..-.+. .+|.. ....| +..++.+++|.|+|.|....|=..|
T Consensus 272 ~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~----v~p~~~dtv~I~pGer~dVlv~~~~pG~y~i~~h~~~h~~~G 347 (1065)
T 2j5w_A 272 GLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT----NKNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAG 347 (1065)
T ss_dssp CCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE----ETTEEESEEEECBTCEEEEEEECCSCEEEEEEECSHHHHHTT
T ss_pred ceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE----ECCeeecEEEECCCcEEEEEEEeCCCeeEEEEecCcchhhCC
Confidence 3478999999999864 1 12 222222222 11211 11123 2356778899999999999998999
Q ss_pred CeEEEEEecCCCCC
Q 037351 124 LKMIIKVLETPSPF 137 (178)
Q Consensus 124 mKl~I~V~~~~~~p 137 (178)
|...+.|......+
T Consensus 348 m~~~~~V~~~~~~~ 361 (1065)
T 2j5w_A 348 LQAFFQVQECNKSS 361 (1065)
T ss_dssp CEEEEEEECSCCCC
T ss_pred CEEEEEEecCCCcc
Confidence 99999998665543
No 93
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=34.86 E-value=57 Score=29.07 Aligned_cols=34 Identities=18% Similarity=0.361 Sum_probs=28.5
Q ss_pred EEEe-cccceEEEEeCCCCCCCCCCeEEEEEecCC
Q 037351 101 VYKL-AKPGLFYFISGVSGHCERGLKMIIKVLETP 134 (178)
Q Consensus 101 ~v~L-~~~G~~YFiCsv~gHC~~GmKl~I~V~~~~ 134 (178)
.+++ +.+|++||-|-...|=..||-..+.|....
T Consensus 117 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 117 DFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence 5664 578999999999888888999999998654
No 94
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=34.56 E-value=23 Score=31.69 Aligned_cols=77 Identities=12% Similarity=0.214 Sum_probs=45.2
Q ss_pred cceeeCCEEEEEEeCC-----cEE----EECcccccccCCCCCceeccCCceEEEecc--cceEEEEeCCC----CCCCC
Q 037351 58 HRFKIGDTLQFKYKKD-----SVM----AVTEVEYKKCRSSHPLFYSNNGNTVYKLAK--PGLFYFISGVS----GHCER 122 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~h-----sV~----~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~--~G~~YFiCsv~----gHC~~ 122 (178)
.+++.||+|+.++.++ ++. .+. ...|. .+..++....+-...++++. +|++||-|-.. .|=..
T Consensus 84 Ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~-~~~DG-~pq~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~ 161 (481)
T 3zx1_A 84 IEVFEGDKLEILVKNKLKEATTIHWHGVPVP-PDQDG-SPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFM 161 (481)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEETCCCC-GGGSC-CTTSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHT
T ss_pred EEEECCcEEEEEEEeCCCCCeeEEecCcccC-CccCC-CccCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhc
Confidence 4789999999999751 221 111 11121 01123333222223566665 79999999863 34457
Q ss_pred CCeEEEEEecCCCC
Q 037351 123 GLKMIIKVLETPSP 136 (178)
Q Consensus 123 GmKl~I~V~~~~~~ 136 (178)
|+...+.|......
T Consensus 162 GL~G~lIV~~~~~~ 175 (481)
T 3zx1_A 162 GLAGAFVIKAKKDA 175 (481)
T ss_dssp TCCEEEEEECSSCT
T ss_pred cceEEEEEcCcccc
Confidence 99999999876543
No 95
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=33.39 E-value=28 Score=23.89 Aligned_cols=19 Identities=21% Similarity=0.422 Sum_probs=15.5
Q ss_pred cccccceeeCCEEEEEEeC
Q 037351 54 WASNHRFKIGDTLQFKYKK 72 (178)
Q Consensus 54 WA~~~tF~VGDtLvF~y~~ 72 (178)
.+.-..+++||.|.|.+..
T Consensus 42 ~~~l~~lk~Gd~V~F~~~~ 60 (82)
T 2l55_A 42 AGLPQGLKAGDRVAFSFRL 60 (82)
T ss_dssp TCCCSSCSTTCEEEEEEEE
T ss_pred hhHhhcCCCCCEEEEEEEE
Confidence 3445689999999999985
No 96
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=32.12 E-value=22 Score=26.80 Aligned_cols=18 Identities=17% Similarity=0.290 Sum_probs=15.2
Q ss_pred cccceeeCCEEEEEEeCC
Q 037351 56 SNHRFKIGDTLQFKYKKD 73 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~h 73 (178)
..+..++||.++|++...
T Consensus 113 ~dn~L~~GD~cvFeli~~ 130 (146)
T 4i1k_A 113 LENNLGEGDVCVFELLRT 130 (146)
T ss_dssp HHTTCCTTCEEEEEECSS
T ss_pred HHcCCCCCCEEEEEEecC
Confidence 457899999999999863
No 97
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=31.70 E-value=67 Score=28.89 Aligned_cols=75 Identities=8% Similarity=0.062 Sum_probs=45.0
Q ss_pred ceeeCCEEEEEEeC-----CcEE----EECcccccccCCCCCceeccCCceEEEecc-cceEEEEeCCCCC----CCCCC
Q 037351 59 RFKIGDTLQFKYKK-----DSVM----AVTEVEYKKCRSSHPLFYSNNGNTVYKLAK-PGLFYFISGVSGH----CERGL 124 (178)
Q Consensus 59 tF~VGDtLvF~y~~-----hsV~----~V~~~~Y~~C~~s~pi~~~~~G~~~v~L~~-~G~~YFiCsv~gH----C~~Gm 124 (178)
+++.||+|+.++.+ +++. .+.. ..|. .+..++....+=...++.+. .|++||=|-..++ =..||
T Consensus 72 ~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~-~~DG-~~~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl 149 (534)
T 3abg_A 72 QVPRGVETVVRFINNAEAPNSVHLHGSFSRA-AFDG-WAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQ 149 (534)
T ss_dssp EEETTCCEEEEEEECSSSCBCEEEETCCCCT-TTTT-CSSSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBC
T ss_pred EEeCCcEEEEEEEECCCCCceEEECCCcCCC-CCCC-CCCCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcc
Confidence 68899999999975 1222 1111 1121 01123433333334677766 4799999987653 23799
Q ss_pred eEEEEEecCCC
Q 037351 125 KMIIKVLETPS 135 (178)
Q Consensus 125 Kl~I~V~~~~~ 135 (178)
...+.|.....
T Consensus 150 ~G~liV~~~~~ 160 (534)
T 3abg_A 150 AGLYMLTDPAE 160 (534)
T ss_dssp EEEEEEECTTT
T ss_pred eEEEEEECCcc
Confidence 99999887554
No 98
>2ls3_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=37.25 E-value=10 Score=21.53 Aligned_cols=16 Identities=25% Similarity=0.584 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHHHHhh
Q 037351 159 AIASLTIMLLIMSFSG 174 (178)
Q Consensus 159 ~~~~~~~~~~~~~~~~ 174 (178)
..-+|++||+.|+|-|
T Consensus 13 ~~~~Y~LML~~MtyN~ 28 (29)
T 2ls3_A 13 VVISYFLMLIFMTYNK 28 (29)
Confidence 4568999999998865
No 99
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=29.26 E-value=26 Score=24.77 Aligned_cols=30 Identities=7% Similarity=0.139 Sum_probs=23.4
Q ss_pred EEEEcCCCCCCCCCCCCccccccccccccceeeCCEEEEEE
Q 037351 30 EFEVGGDNGWHVPNAKEGAQMYNKWASNHRFKIGDTLQFKY 70 (178)
Q Consensus 30 ~~~VGg~~GW~~~~~~~~~~~Y~~WA~~~tF~VGDtLvF~y 70 (178)
+.++||+.| . ...+.|-+. +..||.+.++.
T Consensus 41 ~~~l~DeTG-~--------I~~tlW~~~--l~~Gdvv~i~n 70 (106)
T 2k75_A 41 QGYIEDDTA-R--------IRISSFGKQ--LQDSDVVRIDN 70 (106)
T ss_dssp EEEEECSSC-E--------EEEEEESSC--CCTTEEEEEEE
T ss_pred EEEEEcCCC-e--------EEEEEEcCc--cCCCCEEEEEe
Confidence 567888776 3 457899777 99999999883
No 100
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=29.12 E-value=40 Score=29.23 Aligned_cols=70 Identities=14% Similarity=0.194 Sum_probs=0.0
Q ss_pred ceeeCCEEEEEEeC----------CcEEEECcccccccCCCCCceeccCCceEEEe--cccceEEEEeCCCC----CCCC
Q 037351 59 RFKIGDTLQFKYKK----------DSVMAVTEVEYKKCRSSHPLFYSNNGNTVYKL--AKPGLFYFISGVSG----HCER 122 (178)
Q Consensus 59 tF~VGDtLvF~y~~----------hsV~~V~~~~Y~~C~~s~pi~~~~~G~~~v~L--~~~G~~YFiCsv~g----HC~~ 122 (178)
+++.||+|+.++.+ |.+.+-...|=-.+. +....+-...+++ +.+|++||-|-..+ |=..
T Consensus 50 ~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~----I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~ 125 (439)
T 2xu9_A 50 RVRPRDTVRLTLENRLPEPTNLHWHGLPISPKVDDPFLE----IPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFA 125 (439)
T ss_dssp EECTTCEEEEEEEECSSSCBCCEEETCCCCTTTSCTTCC----BCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHT
T ss_pred EEeCCCEEEEEEEECCCCCcceEeCCCCCCccccCCccc----CCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHh
Q ss_pred CCeEEEEEec
Q 037351 123 GLKMIIKVLE 132 (178)
Q Consensus 123 GmKl~I~V~~ 132 (178)
||...+.|..
T Consensus 126 Gl~G~liV~~ 135 (439)
T 2xu9_A 126 GLLGALVVES 135 (439)
T ss_dssp TCCEEEEECC
T ss_pred hCeEEEEEcC
No 101
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=28.82 E-value=19 Score=25.36 Aligned_cols=10 Identities=20% Similarity=0.594 Sum_probs=5.2
Q ss_pred cccceEEEEeCC
Q 037351 105 AKPGLFYFISGV 116 (178)
Q Consensus 105 ~~~G~~YFiCsv 116 (178)
...|.|| |.+
T Consensus 85 ~Dsg~Y~--C~~ 94 (129)
T 3rrq_A 85 NDSGTYL--CGA 94 (129)
T ss_dssp GGCEEEE--EEE
T ss_pred hHCEEEE--EEE
Confidence 3456655 554
No 102
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=28.46 E-value=64 Score=28.60 Aligned_cols=34 Identities=15% Similarity=0.319 Sum_probs=28.0
Q ss_pred EEEe-cccceEEEEeCCCCCCCCCCeEEEEEecCC
Q 037351 101 VYKL-AKPGLFYFISGVSGHCERGLKMIIKVLETP 134 (178)
Q Consensus 101 ~v~L-~~~G~~YFiCsv~gHC~~GmKl~I~V~~~~ 134 (178)
.+++ +.+|++||-|-...|=..||-..+.|....
T Consensus 96 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 96 KFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (503)
T ss_dssp EECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEeCCCCccEEEEecchhhhhCcceeeEEEcCCC
Confidence 4553 568999999999888888999999998654
No 103
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=28.08 E-value=48 Score=27.47 Aligned_cols=31 Identities=16% Similarity=0.313 Sum_probs=27.3
Q ss_pred ccceEEEEeCCCCCCCCCCeEEEEEecCCCC
Q 037351 106 KPGLFYFISGVSGHCERGLKMIIKVLETPSP 136 (178)
Q Consensus 106 ~~G~~YFiCsv~gHC~~GmKl~I~V~~~~~~ 136 (178)
.||.+.|-|-+..|=..||.-.++|......
T Consensus 245 nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 245 GAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTTCC
T ss_pred CCEeEEEEeCChHHHHCCCeEEEEEECCCCC
Confidence 5899999999999999999999999876543
No 104
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=27.30 E-value=51 Score=28.30 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=29.1
Q ss_pred EEEecccceEEEEeCCCCCCCCCCeEEEEEecCCC
Q 037351 101 VYKLAKPGLFYFISGVSGHCERGLKMIIKVLETPS 135 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~~~~~ 135 (178)
.+..+.||.++|-|-...|=..||...+.|.....
T Consensus 402 ~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 402 DFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred EEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 46678899999999999998889998898875543
No 105
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=26.91 E-value=15 Score=26.98 Aligned_cols=12 Identities=33% Similarity=0.617 Sum_probs=10.3
Q ss_pred cceeeCCEEEEE
Q 037351 58 HRFKIGDTLQFK 69 (178)
Q Consensus 58 ~tF~VGDtLvF~ 69 (178)
+.+++||.|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 368999999994
No 106
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=25.89 E-value=25 Score=23.89 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=14.3
Q ss_pred cccceeeCCEEEEEEeCC
Q 037351 56 SNHRFKIGDTLQFKYKKD 73 (178)
Q Consensus 56 ~~~tF~VGDtLvF~y~~h 73 (178)
.+++|.+||.|++--+..
T Consensus 26 ~rN~f~~GD~iEi~~P~g 43 (89)
T 4he6_A 26 QRNHFRPGDEVEFFGPEI 43 (89)
T ss_dssp ESSCBCTTCEEEEESTTS
T ss_pred EcCCcCCCCEEEEEcCCC
Confidence 467999999999876553
No 107
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=25.87 E-value=37 Score=31.02 Aligned_cols=32 Identities=19% Similarity=0.341 Sum_probs=28.4
Q ss_pred EEEecccceEEEEeCCCCCCCCCCeEEEEEec
Q 037351 101 VYKLAKPGLFYFISGVSGHCERGLKMIIKVLE 132 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC~~GmKl~I~V~~ 132 (178)
.+..+.||.+.|-|-+..|-..||...+.|..
T Consensus 296 ~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 296 EMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp EEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred EEEeccceEeecccCcccccccccccceeeec
Confidence 45678899999999999999999999999964
No 108
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=24.25 E-value=58 Score=27.47 Aligned_cols=28 Identities=21% Similarity=0.254 Sum_probs=18.5
Q ss_pred ceEEEEeCCCC------CCCCCCeEEEEEecCCC
Q 037351 108 GLFYFISGVSG------HCERGLKMIIKVLETPS 135 (178)
Q Consensus 108 G~~YFiCsv~g------HC~~GmKl~I~V~~~~~ 135 (178)
|.+||-|.+.+ |=..||.-.+.|.....
T Consensus 151 Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~ 184 (343)
T 3cg8_A 151 GYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD 184 (343)
T ss_dssp EEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred eEEEEecCccccccchhhhhcCCeEEEEEecCCC
Confidence 67878887633 33468888888865443
No 109
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=23.41 E-value=85 Score=28.59 Aligned_cols=76 Identities=14% Similarity=0.231 Sum_probs=43.0
Q ss_pred cceeeCCEEEEEEeC----------CcEEEECcccccccC----------CCCCceeccCCceEEEecc------cc---
Q 037351 58 HRFKIGDTLQFKYKK----------DSVMAVTEVEYKKCR----------SSHPLFYSNNGNTVYKLAK------PG--- 108 (178)
Q Consensus 58 ~tF~VGDtLvF~y~~----------hsV~~V~~~~Y~~C~----------~s~pi~~~~~G~~~v~L~~------~G--- 108 (178)
.++++||+|+.++.+ |.+.+-.+ .|.-. ...++....+-...++++. +|
T Consensus 71 I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c 148 (647)
T 1sdd_B 71 IRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSAC 148 (647)
T ss_dssp EEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSE
T ss_pred EEEeCCCEEEEEEEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCc
Confidence 478999999999975 22222111 11100 0112322222223566665 58
Q ss_pred -eEEEEeCCC--CCCCCCCeEEEEEecCCC
Q 037351 109 -LFYFISGVS--GHCERGLKMIIKVLETPS 135 (178)
Q Consensus 109 -~~YFiCsv~--gHC~~GmKl~I~V~~~~~ 135 (178)
++||-|-+. .|=..||...+.|.....
T Consensus 149 ~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~ 178 (647)
T 1sdd_B 149 RAWAYYSAVNPEKDIHSGLIGPLLICRKGT 178 (647)
T ss_dssp EEEEEECCSSHHHHHTTTCEEEEEEECTTS
T ss_pred eEEEEccCCCCcccccccCccCEEEeeCCC
Confidence 999999773 355679999999886654
No 110
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=22.44 E-value=28 Score=25.36 Aligned_cols=11 Identities=36% Similarity=0.676 Sum_probs=9.9
Q ss_pred cceeeCCEEEE
Q 037351 58 HRFKIGDTLQF 68 (178)
Q Consensus 58 ~tF~VGDtLvF 68 (178)
+.+++||.|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 47899999999
No 111
>1wia_A Hypothetical ubiquitin-like protein (riken cDNA 2010008E23); 'structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=21.13 E-value=99 Score=20.59 Aligned_cols=20 Identities=0% Similarity=-0.183 Sum_probs=10.5
Q ss_pred CCCCeEEEEEecCCCCCCCC
Q 037351 121 ERGLKMIIKVLETPSPFPYQ 140 (178)
Q Consensus 121 ~~GmKl~I~V~~~~~~p~~~ 140 (178)
..|..+.+.+..+.+.++.|
T Consensus 67 ~~g~~i~l~~~~~~~~~~~~ 86 (95)
T 1wia_A 67 TNNCVIHCHRSPPGAAVSGP 86 (95)
T ss_dssp CTTEEEEEECCCCCCCCCCC
T ss_pred CCCCEEEEEECCCCCCCCCC
Confidence 35666666665444444333
No 112
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=20.20 E-value=1.1e+02 Score=25.36 Aligned_cols=34 Identities=24% Similarity=0.432 Sum_probs=27.2
Q ss_pred EEEecccceEEEEeCCCCCCC------CCCeEEEEEecCC
Q 037351 101 VYKLAKPGLFYFISGVSGHCE------RGLKMIIKVLETP 134 (178)
Q Consensus 101 ~v~L~~~G~~YFiCsv~gHC~------~GmKl~I~V~~~~ 134 (178)
.+..+.||.+.|-|-+..|-. .||...|.+....
T Consensus 239 ~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 466788999999999999998 4677777776544
Done!