BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037353
(110 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis
thaliana GN=At3g47110 PE=3 SV=1
Length = 1025
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 11 LISLIWIIILMNEMHGDKACLQT-------ERTALLELKSFFISISDREYEDVILTSWVD 63
LI + +++ ++ H D C QT ++ ALLE KS +S E V+L SW +
Sbjct: 10 LILVSALLVSVSLEHSDMVCAQTIRLTEETDKQALLEFKS---QVS--ETSRVVLGSW-N 63
Query: 64 DGMPSDCCDDWEGVECNATTRRVMQLSLNGTRM 96
D +P C W GV+C RRV + L G ++
Sbjct: 64 DSLP--LCS-WTGVKCGLKHRRVTGVDLGGLKL 93
>sp|Q0WR59|Y5020_ARATH Probable inactive receptor kinase At5g10020 OS=Arabidopsis
thaliana GN=At5g10020 PE=1 SV=2
Length = 1048
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 25 HGDKACLQTERTALLELKSFFISISDREYEDVILTSWVDDGM---PSDCCDDWEGVECNA 81
HG A +TE +LLE + I D I SW D PS C +DW G+ C+
Sbjct: 17 HGANAVTETELRSLLEFRK---GIRDETSHQRI--SWSDTSSLTDPSTCPNDWPGISCDP 71
Query: 82 TTRRVMQLSLN 92
T ++ ++L+
Sbjct: 72 ETGSIIAINLD 82
>sp|Q00874|DR100_ARATH DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis
thaliana GN=DRT100 PE=2 SV=2
Length = 372
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 28 KACLQTERTALLELKSFFISISDREYEDVILTSWVDDGMPSDCCDDWEGVECNATTRRVM 87
+ C ++TAL KS S E I +W ++ +DCC +W G+ C+ + RV
Sbjct: 25 RCCSPKDQTALNAFKS-----SLSEPNLGIFNTWSEN---TDCCKEWYGISCDPDSGRVT 76
Query: 88 QLSLNG 93
+SL G
Sbjct: 77 DISLRG 82
>sp|Q9M2Z1|BAME2_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase
BAM2 OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=1
Length = 1002
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 33 TERTALLELKSFFISISDREYEDVILTSWVDDGMPSDCCDDWEGVECNATTRRVMQLSLN 92
TE ALL LKS F +I + +LTSW + + C W GV C+ + R V L L+
Sbjct: 26 TELHALLSLKSSF-TIDE---HSPLLTSW---NLSTTFCS-WTGVTCDVSLRHVTSLDLS 77
Query: 93 GTRM 96
G +
Sbjct: 78 GLNL 81
>sp|Q05091|PGIP_PYRCO Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 11/62 (17%)
Query: 30 CLQTERTALLELKSFFISISDREYEDVILTSWVDDGMPSDCCDDWEGVECNATTRRVMQL 89
C ++ LL++K F + +L SW D +DCCD W V C++TT R+ L
Sbjct: 27 CNPDDKKVLLQIKKAF-------GDPYVLASWKSD---TDCCD-WYCVTCDSTTNRINSL 75
Query: 90 SL 91
++
Sbjct: 76 TI 77
>sp|Q9ZVR7|PSKR1_ARATH Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2
SV=4
Length = 1008
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 61 WVDDGMPSDCCDDWEGVECNA-TTRRVMQLSLNGTRM 96
W++ +DCC+ W G+ CN+ T RV++L L ++
Sbjct: 53 WINSSSSTDCCN-WTGITCNSNNTGRVIRLELGNKKL 88
>sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1
SV=1
Length = 1010
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Query: 32 QTERTALLELKSFFISISDREYEDVILTSWVDDGMPSDCCDDWEGVECNATTRRVMQLSL 91
+T+R ALL+ KS +S E + V+L+SW + P C+ W+GV C +RV L L
Sbjct: 23 ETDRQALLQFKS---QVS--EDKRVVLSSW-NHSFP--LCN-WKGVTCGRKNKRVTHLEL 73
>sp|Q9LRT1|Y3804_ARATH Probably inactive leucine-rich repeat receptor-like protein
kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040
PE=2 SV=1
Length = 1016
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 58 LTSWV-DDGMPSDCCDDWEGVECNATTRRVMQLSLNG 93
L SW DD P W V+CN T RV++LSL+G
Sbjct: 54 LESWTEDDNTPCS----WSYVKCNPKTSRVIELSLDG 86
>sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR
OS=Arabidopsis thaliana GN=EFR PE=1 SV=1
Length = 1031
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 32 QTERTALLELKSFFISISDREYEDVILTSWVDDGMPSDCCDDWEGVECNATTRRVMQLSL 91
+T+ ALLE KS + RE +L SW S C+ W GV C RV+ L+L
Sbjct: 29 ETDMQALLEFKSQVSENNKRE----VLASW---NHSSPFCN-WIGVTCGRRRERVISLNL 80
Query: 92 NGTRM 96
G ++
Sbjct: 81 GGFKL 85
>sp|Q6R2K1|SRF5_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana
GN=SRF5 PE=2 SV=1
Length = 699
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 3 STSFVKFSLISLIWIIILMNEMHGDKACLQTERTALLELKSFFISISDREYEDVILTSWV 62
+ V+ ++SL + L+ +T+ + L F S++ L W
Sbjct: 2 TQKLVRLVIVSLAITVTLLQA--------KTDNQEVSALNVMFTSLNSPSK----LKGWK 49
Query: 63 DDGMPSDCCDD-WEGVECNATTRRVMQLS---LNGTRMLLCHN 101
+G D C+D WEGV+C ++ +QLS L G+R L N
Sbjct: 50 ANG--GDPCEDSWEGVKCKGSSVTELQLSGFELGGSRGYLLSN 90
>sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase
At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2
SV=1
Length = 1120
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Query: 34 ERTALLELKSFFISISDREYEDVILTSWVDDGMP--SDCCDDWEGVECNATTRRVMQLSL 91
E ALL+ KS F + S L+SWV D S C W GV CN+ + +L+L
Sbjct: 33 EANALLKWKSTFTNSSK-------LSSWVHDANTNTSFSCTSWYGVSCNSRG-SIEELNL 84
Query: 92 NGT 94
T
Sbjct: 85 TNT 87
>sp|C0LGL9|FEI2_ARATH LRR receptor-like serine/threonine-protein kinase FEI 2
OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1
Length = 589
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Query: 67 PSDCCDDWEGVECNATTRRVMQLSL 91
P C +W+GV C+A T+RV+ LSL
Sbjct: 58 PDPC--NWKGVTCDAKTKRVIALSL 80
>sp|Q3AZA2|RPOC2_SYNS9 DNA-directed RNA polymerase subunit beta' OS=Synechococcus sp.
(strain CC9902) GN=rpoC2 PE=3 SV=1
Length = 1364
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 46 ISISDREYEDVILTSWVDDGMPSDCCDDWEGVECNATTRRV 86
+++ DR + +L S G PSDCC + E V+ ++ T R+
Sbjct: 936 VAVGDRVVDGDLLAS----GQPSDCCGEVEAVDGSSVTLRL 972
>sp|O54890|ITB3_MOUSE Integrin beta-3 OS=Mus musculus GN=Itgb3 PE=1 SV=2
Length = 787
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Query: 69 DC-CD-DWEGVECNATTRRVMQLSLNGTRMLLC 99
DC CD DW G CN TTR +S NG LLC
Sbjct: 571 DCVCDSDWTGYYCNCTTRTDTCMSTNG---LLC 600
>sp|A7GUS0|PGK_BACCN Phosphoglycerate kinase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=pgk PE=3 SV=1
Length = 394
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 27 DKACLQTERTALLELK--SFFISIS---DREYEDVILTSWVD-DGMPSDCCDDWEGVECN 80
DK L E AL + K +F++ + E+ + T VD D +PS+ WEGV+
Sbjct: 241 DKIELAKEFMALAKEKGVNFYMPVDVVITEEFSETATTKIVDIDSIPSN----WEGVDIG 296
Query: 81 ATTRRVMQLSLNGTRMLLCHNDIGV 105
TR + + +++++ + +GV
Sbjct: 297 PKTREIYADVIKNSKLVVWNGPMGV 321
>sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2
SV=2
Length = 847
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 9 FSLISLIWIIILMNEMHGDKA--CLQTERTALLELKSFF-ISISDREYEDVILTSWVDD- 64
FS +I++ +L++ + C +R ALLE + F I+ S I+ W
Sbjct: 11 FSSRIIIFLSLLVHSLASSSPHFCRDDQRDALLEFRGEFPINASWH-----IMNQWRGPW 65
Query: 65 GMPSDCCDDWEGVECNATTRRVMQLSLNGT 94
+DCC W GV CN + +V+ L + T
Sbjct: 66 NKSTDCCL-WNGVTCNDKSGQVISLDIPNT 94
>sp|C0LGF4|FEI1_ARATH LRR receptor-like serine/threonine-protein kinase FEI 1
OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1
Length = 591
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 67 PSDCCDDWEGVECNATTRRVMQLSLNGTRML 97
P C +W GV C+A T+RV+ L+L +++
Sbjct: 59 PDPC--NWNGVTCDAKTKRVITLNLTYHKIM 87
>sp|Q0I7L9|RPOC2_SYNS3 DNA-directed RNA polymerase subunit beta' OS=Synechococcus sp.
(strain CC9311) GN=rpoC2 PE=3 SV=1
Length = 1365
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 65 GMPSDCCDDWEGVECNATTRRV 86
G PSDCC + E V N+ T R+
Sbjct: 950 GQPSDCCGEVEQVSANSVTMRL 971
>sp|P05106|ITB3_HUMAN Integrin beta-3 OS=Homo sapiens GN=ITGB3 PE=1 SV=2
Length = 788
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Query: 69 DC-CD-DWEGVECNATTRRVMQLSLNGTRMLLC 99
DC CD DW G CN TTR +S NG LLC
Sbjct: 572 DCLCDSDWTGYYCNCTTRTDTCMSSNG---LLC 601
>sp|Q06BH3|SRF1_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana
GN=SRF1 PE=2 SV=2
Length = 775
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 17/77 (22%)
Query: 6 FVKFSLISLIWIIILMNEMHGDKACLQTERTALLELKSFFISISDREYEDVILTSWVDDG 65
F+ F+LISL + + + T + + S F+++ E +L WV G
Sbjct: 17 FLSFALISLPSLSLAL-----------TNPDDVAAINSLFLAL-----ESPLLPGWVASG 60
Query: 66 MPSDCCDDWEGVECNAT 82
C + W+GV CNA+
Sbjct: 61 -GDPCGESWQGVLCNAS 76
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,391,480
Number of Sequences: 539616
Number of extensions: 1285148
Number of successful extensions: 2974
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2967
Number of HSP's gapped (non-prelim): 24
length of query: 110
length of database: 191,569,459
effective HSP length: 78
effective length of query: 32
effective length of database: 149,479,411
effective search space: 4783341152
effective search space used: 4783341152
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)