Query 037354
Match_columns 346
No_of_seqs 317 out of 1338
Neff 11.5
Searched_HMMs 46136
Date Fri Mar 29 11:24:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037354.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037354hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 1.9E-36 4.1E-41 252.7 20.8 267 35-335 9-293 (294)
2 KOG4178 Soluble epoxide hydrol 100.0 1.3E-35 2.7E-40 235.0 21.6 281 35-337 23-321 (322)
3 TIGR02240 PHA_depoly_arom poly 100.0 2.5E-35 5.4E-40 243.6 19.1 263 36-338 4-268 (276)
4 PRK00870 haloalkane dehalogena 100.0 5.1E-35 1.1E-39 244.8 20.3 279 24-335 9-300 (302)
5 PRK03592 haloalkane dehalogena 100.0 1.8E-34 3.8E-39 240.9 20.3 275 35-338 8-291 (295)
6 PLN02385 hydrolase; alpha/beta 100.0 7.6E-34 1.6E-38 241.9 23.9 272 33-337 60-346 (349)
7 PLN02679 hydrolase, alpha/beta 100.0 4.6E-34 1E-38 243.3 19.7 277 37-337 64-358 (360)
8 PRK10349 carboxylesterase BioH 100.0 1.9E-33 4.2E-38 230.0 18.8 252 46-335 3-255 (256)
9 TIGR03056 bchO_mg_che_rel puta 100.0 1.1E-32 2.5E-37 228.6 23.2 269 35-334 7-278 (278)
10 PRK10673 acyl-CoA esterase; Pr 100.0 1.4E-32 3.1E-37 225.0 22.7 251 46-335 2-254 (255)
11 PLN02965 Probable pheophorbida 100.0 6.8E-33 1.5E-37 226.2 20.7 247 61-337 4-254 (255)
12 PRK03204 haloalkane dehalogena 100.0 2.6E-32 5.7E-37 225.8 23.9 267 31-334 11-286 (286)
13 PLN02578 hydrolase 100.0 1.4E-32 3.1E-37 234.1 22.0 269 37-335 69-354 (354)
14 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.2E-32 4.7E-37 227.3 22.7 257 44-335 19-282 (282)
15 PLN03087 BODYGUARD 1 domain co 100.0 1.9E-32 4E-37 236.2 20.4 283 38-336 180-479 (481)
16 PLN02298 hydrolase, alpha/beta 100.0 5.3E-32 1.1E-36 229.4 22.4 272 34-338 32-319 (330)
17 PLN03084 alpha/beta hydrolase 100.0 6.2E-32 1.3E-36 228.8 22.4 274 34-335 104-383 (383)
18 PHA02857 monoglyceride lipase; 100.0 1.2E-31 2.6E-36 221.9 23.1 260 37-336 3-273 (276)
19 PRK10749 lysophospholipase L2; 100.0 7.9E-32 1.7E-36 227.4 21.6 273 36-336 32-329 (330)
20 PRK06489 hypothetical protein; 100.0 9.3E-32 2E-36 229.7 20.4 272 42-336 47-357 (360)
21 TIGR03611 RutD pyrimidine util 100.0 1.3E-31 2.8E-36 219.7 19.3 254 47-335 1-257 (257)
22 PRK07581 hypothetical protein; 100.0 2E-31 4.3E-36 226.6 19.7 278 43-336 24-336 (339)
23 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.5E-31 5.5E-36 217.0 17.4 248 46-334 1-251 (251)
24 PRK08775 homoserine O-acetyltr 100.0 4.4E-31 9.5E-36 224.3 18.4 265 35-337 37-340 (343)
25 KOG1454 Predicted hydrolase/ac 100.0 5.3E-31 1.2E-35 218.3 18.1 280 36-337 27-325 (326)
26 TIGR01392 homoserO_Ac_trn homo 100.0 4.3E-31 9.2E-36 225.1 15.6 119 43-163 14-162 (351)
27 KOG1455 Lysophospholipase [Lip 100.0 3.1E-30 6.6E-35 201.1 18.7 268 34-335 27-311 (313)
28 COG2267 PldB Lysophospholipase 100.0 6.6E-30 1.4E-34 209.9 21.3 274 35-338 10-296 (298)
29 TIGR01738 bioH putative pimelo 100.0 2.2E-30 4.7E-35 210.8 18.2 240 60-333 4-245 (245)
30 PRK11126 2-succinyl-6-hydroxy- 100.0 3.2E-30 7E-35 209.4 17.9 236 60-335 2-241 (242)
31 PRK00175 metX homoserine O-ace 100.0 5.8E-30 1.3E-34 219.6 20.0 274 43-337 31-375 (379)
32 TIGR01250 pro_imino_pep_2 prol 100.0 7.9E-30 1.7E-34 212.6 20.4 268 38-334 6-288 (288)
33 PLN02652 hydrolase; alpha/beta 100.0 2.9E-29 6.4E-34 214.0 22.0 263 36-337 112-388 (395)
34 TIGR01249 pro_imino_pep_1 prol 100.0 8E-30 1.7E-34 213.4 18.0 124 34-163 4-130 (306)
35 PLN02211 methyl indole-3-aceta 100.0 3E-29 6.5E-34 205.5 20.6 261 43-335 5-269 (273)
36 KOG4409 Predicted hydrolase/ac 100.0 6.2E-30 1.3E-34 203.2 15.1 281 32-336 63-364 (365)
37 PF12697 Abhydrolase_6: Alpha/ 100.0 8.2E-29 1.8E-33 199.0 17.9 221 63-328 1-228 (228)
38 TIGR03695 menH_SHCHC 2-succiny 100.0 2.4E-28 5.2E-33 199.3 19.8 245 60-334 1-251 (251)
39 PLN02894 hydrolase, alpha/beta 100.0 2.5E-27 5.4E-32 204.0 24.8 267 46-336 93-385 (402)
40 PRK14875 acetoin dehydrogenase 100.0 5E-28 1.1E-32 209.0 18.6 257 37-335 112-370 (371)
41 TIGR01607 PST-A Plasmodium sub 100.0 2.9E-27 6.3E-32 198.9 21.1 265 39-335 2-332 (332)
42 PLN02511 hydrolase 100.0 1.9E-27 4.1E-32 204.0 17.5 277 32-336 69-365 (388)
43 PLN02980 2-oxoglutarate decarb 100.0 2E-27 4.3E-32 233.9 18.5 259 47-338 1360-1641(1655)
44 PRK05855 short chain dehydroge 100.0 3.7E-27 7.9E-32 215.7 19.0 277 38-338 6-294 (582)
45 KOG2984 Predicted hydrolase [G 99.9 8E-27 1.7E-31 170.0 12.9 248 35-337 22-277 (277)
46 COG1647 Esterase/lipase [Gener 99.9 5.8E-26 1.3E-30 168.6 15.7 221 60-335 15-243 (243)
47 KOG2382 Predicted alpha/beta h 99.9 1.2E-25 2.5E-30 178.7 18.4 268 45-337 36-314 (315)
48 PRK06765 homoserine O-acetyltr 99.9 8.7E-26 1.9E-30 191.9 18.3 278 43-335 39-387 (389)
49 PRK05077 frsA fermentation/res 99.9 1.4E-24 3E-29 187.0 21.4 240 33-336 167-412 (414)
50 PRK10985 putative hydrolase; P 99.9 1.9E-23 4E-28 176.0 25.1 273 33-336 30-320 (324)
51 PRK13604 luxD acyl transferase 99.9 1.4E-23 3E-28 169.1 18.7 127 33-163 8-141 (307)
52 PLN02872 triacylglycerol lipas 99.9 2E-23 4.4E-28 177.4 18.6 133 29-164 39-198 (395)
53 TIGR01838 PHA_synth_I poly(R)- 99.9 1.9E-22 4.1E-27 176.0 21.3 257 59-321 187-459 (532)
54 TIGR03100 hydr1_PEP hydrolase, 99.9 8.5E-22 1.8E-26 161.8 21.6 116 43-163 10-134 (274)
55 PRK11071 esterase YqiA; Provis 99.9 8.3E-22 1.8E-26 152.0 16.3 185 61-334 2-189 (190)
56 TIGR01836 PHA_synth_III_C poly 99.9 2.8E-21 6.2E-26 164.6 20.5 263 59-335 61-349 (350)
57 PF00561 Abhydrolase_1: alpha/ 99.9 7.2E-23 1.6E-27 164.9 9.9 220 89-330 1-229 (230)
58 PRK10566 esterase; Provisional 99.9 6E-21 1.3E-25 155.5 20.1 111 47-160 15-139 (249)
59 KOG2564 Predicted acetyltransf 99.9 3.2E-21 7E-26 148.2 14.8 125 35-162 49-181 (343)
60 KOG1552 Predicted alpha/beta h 99.9 4.5E-20 9.7E-25 141.8 16.6 216 35-338 36-254 (258)
61 COG0596 MhpC Predicted hydrola 99.9 2E-19 4.3E-24 148.1 22.0 265 43-334 8-280 (282)
62 PRK07868 acyl-CoA synthetase; 99.9 1.3E-19 2.8E-24 173.4 22.7 265 59-337 66-362 (994)
63 PF12695 Abhydrolase_5: Alpha/ 99.9 1.3E-20 2.9E-25 140.3 12.5 144 62-317 1-145 (145)
64 COG2021 MET2 Homoserine acetyl 99.8 1.3E-19 2.8E-24 146.5 18.5 273 43-335 34-367 (368)
65 KOG4391 Predicted alpha/beta h 99.8 3.3E-20 7.1E-25 137.3 13.7 224 32-337 52-283 (300)
66 KOG4667 Predicted esterase [Li 99.8 2.8E-19 6.1E-24 132.2 15.9 219 59-334 32-256 (269)
67 PF03096 Ndr: Ndr family; Int 99.8 3E-19 6.5E-24 141.0 16.0 259 37-336 2-279 (283)
68 KOG2931 Differentiation-relate 99.8 5.8E-18 1.3E-22 131.6 21.5 267 34-337 22-307 (326)
69 TIGR03101 hydr2_PEP hydrolase, 99.8 4E-19 8.7E-24 142.8 13.4 123 38-163 4-134 (266)
70 PRK11460 putative hydrolase; P 99.8 3.8E-18 8.2E-23 136.2 16.9 172 58-334 14-210 (232)
71 TIGR02821 fghA_ester_D S-formy 99.8 2.1E-17 4.7E-22 135.8 21.8 120 43-163 23-173 (275)
72 COG3208 GrsT Predicted thioest 99.8 5.5E-18 1.2E-22 129.5 16.1 220 59-336 6-236 (244)
73 COG0429 Predicted hydrolase of 99.8 3.6E-17 7.7E-22 130.3 19.5 275 31-335 46-339 (345)
74 PLN02442 S-formylglutathione h 99.8 5.5E-17 1.2E-21 133.6 21.0 120 43-163 28-178 (283)
75 KOG1838 Alpha/beta hydrolase [ 99.8 1.2E-16 2.7E-21 132.0 20.2 132 29-162 88-235 (409)
76 PF06342 DUF1057: Alpha/beta h 99.8 3.6E-16 7.8E-21 122.0 19.6 113 48-164 24-138 (297)
77 COG1506 DAP2 Dipeptidyl aminop 99.7 3.3E-16 7.1E-21 142.4 18.6 231 33-336 364-616 (620)
78 PLN00021 chlorophyllase 99.7 2.4E-16 5.3E-21 130.4 15.9 116 46-163 38-166 (313)
79 TIGR01839 PHA_synth_II poly(R) 99.7 9.6E-16 2.1E-20 132.8 19.9 250 59-319 214-483 (560)
80 PF06500 DUF1100: Alpha/beta h 99.7 7.3E-16 1.6E-20 128.5 15.6 241 31-335 162-408 (411)
81 PF00326 Peptidase_S9: Prolyl 99.7 4.1E-16 8.9E-21 123.7 12.5 188 78-336 5-209 (213)
82 TIGR01840 esterase_phb esteras 99.7 2.9E-15 6.3E-20 118.5 15.9 105 59-163 12-130 (212)
83 TIGR03230 lipo_lipase lipoprot 99.7 4.9E-16 1.1E-20 132.3 11.8 105 59-164 40-155 (442)
84 PRK10162 acetyl esterase; Prov 99.7 3.9E-14 8.5E-19 118.8 21.5 126 37-164 60-196 (318)
85 cd00707 Pancreat_lipase_like P 99.6 6.5E-16 1.4E-20 126.2 8.9 122 38-164 18-148 (275)
86 TIGR01849 PHB_depoly_PhaZ poly 99.6 1.2E-14 2.7E-19 122.4 16.5 265 60-335 102-405 (406)
87 PF02230 Abhydrolase_2: Phosph 99.6 5.3E-15 1.1E-19 117.3 13.1 178 56-335 10-214 (216)
88 PF06821 Ser_hydrolase: Serine 99.6 4.9E-15 1.1E-19 111.4 12.1 155 63-321 1-157 (171)
89 COG2945 Predicted hydrolase of 99.6 2.8E-14 6E-19 104.4 15.1 172 58-334 26-205 (210)
90 PF12146 Hydrolase_4: Putative 99.6 2.3E-15 4.9E-20 97.2 6.6 77 44-122 1-79 (79)
91 PF01738 DLH: Dienelactone hyd 99.6 6.5E-14 1.4E-18 111.5 16.2 175 58-335 12-216 (218)
92 TIGR00976 /NonD putative hydro 99.6 1.5E-14 3.3E-19 130.3 10.8 123 40-164 2-133 (550)
93 PF10230 DUF2305: Uncharacteri 99.6 4.6E-13 1E-17 108.7 18.3 105 60-164 2-123 (266)
94 KOG2624 Triglyceride lipase-ch 99.6 5.6E-13 1.2E-17 112.3 19.3 133 29-163 43-199 (403)
95 PF00975 Thioesterase: Thioest 99.6 3.5E-14 7.6E-19 114.1 11.4 101 61-163 1-104 (229)
96 COG0400 Predicted esterase [Ge 99.5 1.2E-13 2.7E-18 106.1 12.8 104 58-163 16-134 (207)
97 COG0412 Dienelactone hydrolase 99.5 1.2E-12 2.7E-17 104.1 18.0 195 37-336 5-233 (236)
98 COG4757 Predicted alpha/beta h 99.5 1.9E-13 4.2E-18 102.9 12.4 257 37-333 8-280 (281)
99 PF05448 AXE1: Acetyl xylan es 99.5 1.2E-12 2.5E-17 108.7 17.9 232 36-335 58-319 (320)
100 KOG2565 Predicted hydrolases o 99.5 8.3E-14 1.8E-18 112.0 10.4 120 43-163 132-264 (469)
101 PF05728 UPF0227: Uncharacteri 99.5 2.3E-12 5E-17 97.9 16.6 87 63-163 2-91 (187)
102 TIGR03502 lipase_Pla1_cef extr 99.5 9.7E-14 2.1E-18 125.7 10.5 110 38-148 421-575 (792)
103 COG3458 Acetyl esterase (deace 99.5 1.7E-12 3.7E-17 100.3 15.5 229 37-336 59-317 (321)
104 COG3243 PhaC Poly(3-hydroxyalk 99.5 1.1E-12 2.5E-17 108.1 15.2 268 59-336 106-399 (445)
105 PF09752 DUF2048: Uncharacteri 99.5 7.1E-12 1.5E-16 102.1 18.2 240 58-335 90-348 (348)
106 PRK10115 protease 2; Provision 99.5 5.1E-12 1.1E-16 116.0 19.0 130 33-164 415-560 (686)
107 PF08538 DUF1749: Protein of u 99.4 5.3E-13 1.1E-17 107.0 7.8 99 59-165 32-150 (303)
108 PF02273 Acyl_transf_2: Acyl t 99.4 1.3E-11 2.9E-16 94.0 14.6 124 36-163 4-134 (294)
109 PF07859 Abhydrolase_3: alpha/ 99.4 1.6E-11 3.5E-16 97.3 13.8 99 63-164 1-111 (211)
110 PF02129 Peptidase_S15: X-Pro 99.4 4.3E-12 9.3E-17 104.4 10.6 122 43-165 1-138 (272)
111 PRK10252 entF enterobactin syn 99.3 2E-11 4.3E-16 122.2 15.7 101 60-163 1068-1171(1296)
112 PTZ00472 serine carboxypeptida 99.3 8E-11 1.7E-15 103.1 16.6 127 35-164 48-217 (462)
113 PF10503 Esterase_phd: Esteras 99.3 8.4E-11 1.8E-15 91.6 14.6 117 47-163 1-132 (220)
114 COG3545 Predicted esterase of 99.3 2.3E-10 4.9E-15 83.2 15.5 171 61-335 3-178 (181)
115 PF12740 Chlorophyllase2: Chlo 99.3 6.9E-11 1.5E-15 93.2 13.6 102 59-162 16-130 (259)
116 PF06028 DUF915: Alpha/beta hy 99.3 7.8E-11 1.7E-15 94.0 14.0 104 59-164 10-144 (255)
117 KOG4627 Kynurenine formamidase 99.3 6.8E-11 1.5E-15 87.6 12.1 198 39-321 48-251 (270)
118 KOG1515 Arylacetamide deacetyl 99.3 4.8E-09 1E-13 87.0 24.1 124 38-164 65-208 (336)
119 PRK05371 x-prolyl-dipeptidyl a 99.3 1.4E-10 3E-15 107.4 16.4 82 81-163 273-373 (767)
120 COG0657 Aes Esterase/lipase [L 99.3 9.6E-10 2.1E-14 92.5 19.9 120 43-164 60-192 (312)
121 COG3319 Thioesterase domains o 99.3 3.5E-10 7.7E-15 89.9 15.1 101 61-164 1-104 (257)
122 COG3571 Predicted hydrolase of 99.2 1.8E-09 3.8E-14 76.9 15.7 101 59-161 13-122 (213)
123 KOG3975 Uncharacterized conser 99.2 7.7E-10 1.7E-14 84.6 13.6 106 58-163 27-147 (301)
124 PF07819 PGAP1: PGAP1-like pro 99.2 1.4E-10 3.1E-15 91.6 10.0 103 59-163 3-123 (225)
125 KOG2100 Dipeptidyl aminopeptid 99.2 1.3E-09 2.7E-14 100.8 17.5 223 35-335 499-746 (755)
126 PF12715 Abhydrolase_7: Abhydr 99.2 5E-11 1.1E-15 98.2 7.2 132 29-162 83-259 (390)
127 KOG2281 Dipeptidyl aminopeptid 99.2 2.5E-09 5.4E-14 92.6 17.5 224 35-335 614-866 (867)
128 COG4099 Predicted peptidase [G 99.1 1.4E-09 3.1E-14 85.5 12.6 120 40-162 167-303 (387)
129 PF06057 VirJ: Bacterial virul 99.1 6.2E-10 1.4E-14 82.9 10.2 97 61-163 3-107 (192)
130 PF03959 FSH1: Serine hydrolas 99.1 3.5E-10 7.5E-15 89.1 9.5 162 59-321 3-205 (212)
131 KOG3043 Predicted hydrolase re 99.1 1.7E-09 3.7E-14 81.7 11.8 181 47-335 28-239 (242)
132 PF07224 Chlorophyllase: Chlor 99.1 2.7E-09 5.8E-14 82.6 12.6 103 59-163 45-157 (307)
133 PF08840 BAAT_C: BAAT / Acyl-C 99.1 4.8E-10 1E-14 88.1 8.8 50 113-163 5-56 (213)
134 PF03403 PAF-AH_p_II: Platelet 99.1 1.9E-09 4.1E-14 92.0 11.7 102 59-163 99-262 (379)
135 KOG2112 Lysophospholipase [Lip 99.0 4E-09 8.6E-14 79.2 10.9 102 60-162 3-127 (206)
136 KOG2551 Phospholipase/carboxyh 99.0 1.9E-08 4.2E-13 76.1 13.8 58 277-335 163-223 (230)
137 COG4188 Predicted dienelactone 99.0 3.5E-09 7.5E-14 86.9 9.2 91 59-151 70-182 (365)
138 PRK04940 hypothetical protein; 99.0 6.5E-08 1.4E-12 72.1 14.7 86 63-163 2-92 (180)
139 PF11339 DUF3141: Protein of u 98.9 6.1E-08 1.3E-12 82.6 15.9 76 88-167 100-179 (581)
140 smart00824 PKS_TE Thioesterase 98.9 1.7E-08 3.8E-13 79.9 11.6 95 65-163 2-102 (212)
141 PLN02733 phosphatidylcholine-s 98.9 6.9E-09 1.5E-13 89.7 8.9 90 71-163 105-201 (440)
142 PF05677 DUF818: Chlamydia CHL 98.9 1.4E-07 3E-12 76.6 15.2 123 36-161 114-252 (365)
143 PF01674 Lipase_2: Lipase (cla 98.9 5.8E-09 1.3E-13 81.2 7.2 85 61-148 2-95 (219)
144 PF00151 Lipase: Lipase; Inte 98.9 2.1E-09 4.5E-14 89.7 4.4 102 58-164 69-188 (331)
145 COG3509 LpqC Poly(3-hydroxybut 98.8 4.6E-08 9.9E-13 77.5 11.0 127 36-163 37-179 (312)
146 COG2936 Predicted acyl esteras 98.8 7.9E-07 1.7E-11 77.9 18.7 129 35-164 20-160 (563)
147 PF05990 DUF900: Alpha/beta hy 98.8 2.4E-08 5.3E-13 79.4 8.6 104 59-163 17-137 (233)
148 PF03583 LIP: Secretory lipase 98.8 1.7E-07 3.8E-12 77.3 13.7 59 277-335 219-284 (290)
149 COG4814 Uncharacterized protei 98.8 1.3E-06 2.8E-11 67.7 15.8 103 60-163 45-176 (288)
150 PF00450 Peptidase_S10: Serine 98.7 3.4E-06 7.4E-11 74.3 20.0 128 34-164 11-182 (415)
151 PF04301 DUF452: Protein of un 98.7 6.3E-07 1.4E-11 69.1 12.1 80 60-163 11-90 (213)
152 KOG4840 Predicted hydrolases o 98.6 3.5E-06 7.6E-11 63.9 14.8 98 60-164 36-145 (299)
153 KOG3101 Esterase D [General fu 98.6 1.2E-06 2.7E-11 65.7 12.1 119 45-164 26-177 (283)
154 PLN02606 palmitoyl-protein thi 98.6 3E-06 6.4E-11 68.5 15.1 99 60-162 26-131 (306)
155 KOG1553 Predicted alpha/beta h 98.6 5.1E-07 1.1E-11 72.9 10.2 121 38-162 218-344 (517)
156 KOG1551 Uncharacterized conser 98.6 7.3E-06 1.6E-10 63.9 15.8 237 60-337 113-367 (371)
157 COG1075 LipA Predicted acetylt 98.6 2.7E-07 5.8E-12 77.9 8.2 100 60-162 59-163 (336)
158 COG3150 Predicted esterase [Ge 98.5 4.9E-06 1.1E-10 60.2 12.1 90 63-163 2-91 (191)
159 PF05057 DUF676: Putative seri 98.5 4.3E-07 9.2E-12 71.8 7.0 89 59-147 3-97 (217)
160 PF12048 DUF3530: Protein of u 98.4 9.3E-05 2E-09 61.7 20.1 102 59-162 86-228 (310)
161 PF08386 Abhydrolase_4: TAP-li 98.4 1.1E-06 2.5E-11 60.2 6.8 60 277-336 34-94 (103)
162 PF00756 Esterase: Putative es 98.4 8.1E-07 1.8E-11 72.4 6.8 105 59-163 23-150 (251)
163 KOG3847 Phospholipase A2 (plat 98.4 4.5E-06 9.8E-11 66.7 10.2 100 59-162 117-274 (399)
164 PF05577 Peptidase_S28: Serine 98.4 2.7E-06 5.9E-11 75.1 10.1 106 59-164 28-149 (434)
165 PLN02209 serine carboxypeptida 98.4 2.4E-05 5.1E-10 68.3 15.4 129 34-164 39-213 (437)
166 KOG1282 Serine carboxypeptidas 98.4 0.00011 2.5E-09 63.6 19.1 130 33-165 43-215 (454)
167 PLN02633 palmitoyl protein thi 98.4 5.5E-05 1.2E-09 61.4 16.1 99 60-162 25-130 (314)
168 PLN03016 sinapoylglucose-malat 98.4 5.5E-05 1.2E-09 66.0 17.3 130 33-164 36-211 (433)
169 KOG2541 Palmitoyl protein thio 98.3 9.5E-06 2.1E-10 63.5 10.0 98 61-162 24-127 (296)
170 COG4782 Uncharacterized protei 98.3 4.9E-06 1.1E-10 68.2 8.1 104 59-163 115-234 (377)
171 KOG3724 Negative regulator of 98.2 5.1E-06 1.1E-10 74.4 8.0 104 57-162 86-219 (973)
172 PF05705 DUF829: Eukaryotic pr 98.2 0.0001 2.2E-09 59.5 14.7 56 278-333 179-240 (240)
173 cd00312 Esterase_lipase Estera 98.2 1.9E-05 4E-10 71.2 10.9 107 58-164 93-214 (493)
174 PF02089 Palm_thioest: Palmito 98.2 5.4E-06 1.2E-10 66.5 6.4 103 59-162 4-115 (279)
175 PRK10439 enterobactin/ferric e 98.1 5.6E-05 1.2E-09 65.7 11.7 118 44-162 191-322 (411)
176 KOG3253 Predicted alpha/beta h 98.1 6.5E-05 1.4E-09 65.6 11.7 41 280-320 307-348 (784)
177 PF10340 DUF2424: Protein of u 98.1 8.9E-05 1.9E-09 62.3 12.0 106 59-165 121-237 (374)
178 COG2272 PnbA Carboxylesterase 97.9 9.6E-05 2.1E-09 63.6 9.8 118 46-164 79-218 (491)
179 COG1505 Serine proteases of th 97.9 0.00044 9.4E-09 60.8 13.6 127 35-163 395-535 (648)
180 PF02450 LCAT: Lecithin:choles 97.9 7E-05 1.5E-09 64.8 8.9 112 38-163 33-160 (389)
181 KOG2237 Predicted serine prote 97.9 0.00047 1E-08 61.0 13.1 130 33-164 440-585 (712)
182 COG0627 Predicted esterase [Ge 97.8 0.00012 2.7E-09 60.7 9.0 107 59-165 53-189 (316)
183 COG1770 PtrB Protease II [Amin 97.8 0.0019 4.2E-08 57.6 16.5 127 37-164 422-563 (682)
184 COG1073 Hydrolases of the alph 97.8 1.7E-05 3.6E-10 66.4 3.7 59 278-336 233-297 (299)
185 PF07519 Tannase: Tannase and 97.8 0.0081 1.8E-07 53.4 20.1 115 46-165 16-152 (474)
186 COG2382 Fes Enterochelin ester 97.7 0.00094 2E-08 53.9 12.0 118 45-163 83-212 (299)
187 KOG2183 Prolylcarboxypeptidase 97.7 9.7E-05 2.1E-09 61.7 6.5 102 61-162 81-201 (492)
188 PF00135 COesterase: Carboxyle 97.7 0.00059 1.3E-08 62.3 11.6 122 43-164 107-246 (535)
189 PF06259 Abhydrolase_8: Alpha/ 97.7 0.0017 3.7E-08 49.0 11.9 117 46-163 6-144 (177)
190 PF10142 PhoPQ_related: PhoPQ- 97.7 0.0007 1.5E-08 57.3 10.8 58 277-336 262-320 (367)
191 PF11144 DUF2920: Protein of u 97.6 0.00058 1.3E-08 57.8 10.0 120 44-163 19-219 (403)
192 KOG3967 Uncharacterized conser 97.6 0.0012 2.6E-08 50.1 10.2 103 59-163 100-227 (297)
193 KOG2182 Hydrolytic enzymes of 97.5 0.0007 1.5E-08 58.2 9.4 105 59-163 85-207 (514)
194 PF04083 Abhydro_lipase: Parti 97.5 0.00024 5.1E-09 43.3 4.4 48 30-77 8-60 (63)
195 PLN02213 sinapoylglucose-malat 97.4 0.01 2.2E-07 50.1 15.0 59 278-336 234-317 (319)
196 COG4553 DepA Poly-beta-hydroxy 97.4 0.0018 3.9E-08 51.8 9.1 111 50-164 93-210 (415)
197 cd00741 Lipase Lipase. Lipase 97.3 0.00068 1.5E-08 50.5 5.9 52 111-163 8-67 (153)
198 COG2939 Carboxypeptidase C (ca 97.3 0.00079 1.7E-08 58.2 6.8 115 47-163 88-236 (498)
199 COG2819 Predicted hydrolase of 97.3 0.0048 1E-07 49.2 10.4 36 128-163 137-172 (264)
200 PF07082 DUF1350: Protein of u 97.3 0.0014 3E-08 51.6 7.3 101 59-161 16-123 (250)
201 COG2830 Uncharacterized protei 97.1 0.0014 3E-08 47.3 5.1 79 61-163 12-90 (214)
202 PF01764 Lipase_3: Lipase (cla 97.0 0.0013 2.7E-08 48.2 5.0 38 111-149 48-85 (140)
203 COG3946 VirJ Type IV secretory 96.9 0.0053 1.1E-07 51.6 7.9 87 59-151 259-349 (456)
204 PLN02517 phosphatidylcholine-s 96.9 0.0013 2.9E-08 58.3 4.6 84 75-163 157-263 (642)
205 PF11187 DUF2974: Protein of u 96.8 0.0034 7.3E-08 49.7 6.0 47 114-162 72-122 (224)
206 PF05576 Peptidase_S37: PS-10 96.8 0.0058 1.3E-07 51.7 7.5 111 46-163 53-169 (448)
207 KOG1202 Animal-type fatty acid 96.8 0.017 3.7E-07 55.4 10.7 95 59-164 2122-2220(2376)
208 PF11288 DUF3089: Protein of u 96.6 0.0044 9.6E-08 47.8 5.0 41 109-149 76-116 (207)
209 KOG2369 Lecithin:cholesterol a 96.6 0.0036 7.9E-08 53.7 4.8 87 75-163 125-225 (473)
210 cd00519 Lipase_3 Lipase (class 96.4 0.0059 1.3E-07 49.0 4.9 34 128-161 128-166 (229)
211 PF01083 Cutinase: Cutinase; 96.3 0.022 4.9E-07 43.5 7.4 100 61-162 6-121 (179)
212 PF06441 EHN: Epoxide hydrolas 96.2 0.0075 1.6E-07 41.7 3.7 40 38-78 71-110 (112)
213 KOG2521 Uncharacterized conser 96.1 0.5 1.1E-05 40.0 14.7 59 280-338 228-292 (350)
214 PLN02162 triacylglycerol lipas 96.1 0.015 3.3E-07 50.3 6.0 37 110-147 261-297 (475)
215 PLN00413 triacylglycerol lipas 96.0 0.018 3.9E-07 50.1 6.1 36 111-147 268-303 (479)
216 KOG4388 Hormone-sensitive lipa 95.7 0.053 1.2E-06 48.0 7.6 116 46-163 382-508 (880)
217 PLN02571 triacylglycerol lipas 95.7 0.015 3.2E-07 49.9 4.3 38 111-148 208-246 (413)
218 PLN02454 triacylglycerol lipas 95.5 0.019 4E-07 49.3 4.3 34 115-148 214-248 (414)
219 KOG4372 Predicted alpha/beta h 95.3 0.022 4.8E-07 48.2 4.0 85 59-146 79-168 (405)
220 KOG1516 Carboxylesterase and r 95.2 0.1 2.2E-06 47.9 8.5 105 60-164 112-233 (545)
221 COG4947 Uncharacterized protei 95.2 0.027 5.9E-07 41.4 3.5 113 44-163 14-136 (227)
222 PLN02310 triacylglycerol lipas 95.1 0.052 1.1E-06 46.6 5.7 38 111-148 189-229 (405)
223 PLN02408 phospholipase A1 95.1 0.031 6.8E-07 47.3 4.3 37 113-149 184-221 (365)
224 PLN02934 triacylglycerol lipas 95.1 0.038 8.2E-07 48.5 4.7 37 110-147 304-340 (515)
225 PF06850 PHB_depo_C: PHB de-po 94.8 0.057 1.2E-06 41.0 4.5 58 278-335 135-201 (202)
226 KOG1283 Serine carboxypeptidas 94.6 0.48 1E-05 39.0 9.4 124 38-164 7-167 (414)
227 PF05277 DUF726: Protein of un 94.5 0.12 2.6E-06 43.7 6.2 36 128-163 220-260 (345)
228 PLN03037 lipase class 3 family 94.5 0.053 1.1E-06 47.8 4.2 37 112-148 299-338 (525)
229 PLN02324 triacylglycerol lipas 94.4 0.055 1.2E-06 46.5 4.1 36 113-148 199-235 (415)
230 PLN02753 triacylglycerol lipas 94.3 0.066 1.4E-06 47.3 4.3 37 112-148 292-332 (531)
231 PLN02802 triacylglycerol lipas 94.2 0.073 1.6E-06 46.8 4.4 37 112-148 313-350 (509)
232 COG4287 PqaA PhoPQ-activated p 94.0 0.11 2.5E-06 43.3 4.9 59 276-336 328-387 (507)
233 PLN02761 lipase class 3 family 93.9 0.086 1.9E-06 46.6 4.3 36 112-147 273-313 (527)
234 PLN02719 triacylglycerol lipas 93.6 0.099 2.1E-06 46.1 4.2 37 112-148 278-318 (518)
235 PLN02847 triacylglycerol lipas 92.4 0.23 4.9E-06 44.7 4.7 21 128-148 251-271 (633)
236 KOG4569 Predicted lipase [Lipi 92.3 0.2 4.3E-06 42.7 4.1 37 111-148 155-191 (336)
237 PF08237 PE-PPE: PE-PPE domain 92.2 0.67 1.4E-05 36.9 6.7 61 88-148 2-68 (225)
238 KOG2029 Uncharacterized conser 90.9 0.46 1E-05 42.6 4.9 54 109-162 505-571 (697)
239 COG5153 CVT17 Putative lipase 86.1 2 4.4E-05 34.9 5.2 24 127-150 275-298 (425)
240 KOG4540 Putative lipase essent 86.1 2 4.4E-05 34.9 5.2 24 127-150 275-298 (425)
241 TIGR03712 acc_sec_asp2 accesso 85.4 27 0.00058 31.3 15.5 115 39-162 270-389 (511)
242 PF09994 DUF2235: Uncharacteri 82.1 16 0.00035 30.2 9.2 40 109-148 72-112 (277)
243 KOG2385 Uncharacterized conser 81.1 4.5 9.6E-05 36.0 5.6 39 124-163 444-487 (633)
244 PF09949 DUF2183: Uncharacteri 80.8 10 0.00022 25.7 6.2 80 78-158 14-97 (100)
245 PF06792 UPF0261: Uncharacteri 77.8 21 0.00046 31.1 8.6 95 62-158 3-125 (403)
246 COG1448 TyrB Aspartate/tyrosin 76.3 13 0.00028 31.9 6.8 88 59-162 170-264 (396)
247 PRK02399 hypothetical protein; 75.2 36 0.00077 29.8 9.2 95 61-158 4-127 (406)
248 COG4822 CbiK Cobalamin biosynt 75.0 15 0.00032 28.7 6.2 64 58-134 136-200 (265)
249 PRK12467 peptide synthase; Pro 73.2 10 0.00022 44.1 7.2 99 60-161 3692-3793(3956)
250 KOG4389 Acetylcholinesterase/B 71.9 47 0.001 29.9 9.2 124 47-172 121-264 (601)
251 cd01714 ETF_beta The electron 68.2 19 0.00041 28.2 5.8 65 87-159 75-145 (202)
252 COG0529 CysC Adenylylsulfate k 67.9 12 0.00027 28.4 4.4 36 59-95 21-58 (197)
253 smart00827 PKS_AT Acyl transfe 67.4 5.8 0.00013 33.2 3.1 31 117-148 72-102 (298)
254 PF00698 Acyl_transf_1: Acyl t 66.8 3.7 8E-05 34.8 1.8 31 117-148 74-104 (318)
255 COG3673 Uncharacterized conser 64.8 58 0.0012 27.5 7.9 99 59-161 30-151 (423)
256 PF03283 PAE: Pectinacetyleste 61.8 55 0.0012 28.4 7.9 48 117-164 144-196 (361)
257 PF05576 Peptidase_S37: PS-10 61.8 9.2 0.0002 33.2 3.2 53 280-334 354-412 (448)
258 TIGR03131 malonate_mdcH malona 61.8 8 0.00017 32.3 2.9 31 117-148 66-96 (295)
259 cd07225 Pat_PNPLA6_PNPLA7 Pata 61.3 11 0.00023 31.9 3.5 32 117-149 33-64 (306)
260 cd07198 Patatin Patatin-like p 58.9 12 0.00026 28.3 3.2 32 117-149 16-47 (172)
261 COG1073 Hydrolases of the alph 58.9 51 0.0011 27.0 7.3 88 59-150 48-154 (299)
262 PRK10279 hypothetical protein; 58.1 12 0.00025 31.5 3.2 34 117-151 23-56 (300)
263 PF11713 Peptidase_C80: Peptid 57.7 6.7 0.00015 29.2 1.6 47 94-140 59-116 (157)
264 TIGR00128 fabD malonyl CoA-acy 56.4 11 0.00024 31.4 2.8 30 118-148 73-103 (290)
265 PLN02748 tRNA dimethylallyltra 56.0 58 0.0013 29.4 7.2 77 58-136 19-120 (468)
266 cd07207 Pat_ExoU_VipD_like Exo 55.4 15 0.00033 28.4 3.3 31 118-149 18-48 (194)
267 cd07227 Pat_Fungal_NTE1 Fungal 54.7 16 0.00035 30.1 3.4 32 117-149 28-59 (269)
268 cd07210 Pat_hypo_W_succinogene 54.1 18 0.00039 28.8 3.5 30 119-149 20-49 (221)
269 PF10605 3HBOH: 3HB-oligomer h 53.9 11 0.00024 34.4 2.5 37 129-165 286-323 (690)
270 COG1752 RssA Predicted esteras 51.8 17 0.00036 30.7 3.2 33 117-150 29-61 (306)
271 PRK13728 conjugal transfer pro 51.3 24 0.00051 27.1 3.6 58 35-100 54-111 (181)
272 PF06309 Torsin: Torsin; Inte 50.3 14 0.00031 26.2 2.1 27 59-85 51-79 (127)
273 COG3340 PepE Peptidase E [Amin 49.8 61 0.0013 25.5 5.5 37 60-96 32-70 (224)
274 KOG2872 Uroporphyrinogen decar 49.6 49 0.0011 27.3 5.2 69 60-136 252-336 (359)
275 PF03610 EIIA-man: PTS system 49.3 87 0.0019 21.7 6.4 76 62-147 2-77 (116)
276 cd07228 Pat_NTE_like_bacteria 47.6 25 0.00055 26.6 3.4 31 119-150 20-50 (175)
277 cd07209 Pat_hypo_Ecoli_Z1214_l 46.1 25 0.00054 27.8 3.2 33 117-150 16-48 (215)
278 PF01012 ETF: Electron transfe 45.3 1.3E+02 0.0027 22.5 6.9 58 84-149 54-113 (164)
279 PRK06731 flhF flagellar biosyn 45.1 1.8E+02 0.0039 24.1 8.0 64 88-159 154-219 (270)
280 PF13207 AAA_17: AAA domain; P 45.0 20 0.00043 25.0 2.3 60 63-124 1-64 (121)
281 KOG1411 Aspartate aminotransfe 44.6 77 0.0017 27.1 5.7 89 59-162 196-291 (427)
282 PF00326 Peptidase_S9: Prolyl 44.5 45 0.00097 26.1 4.5 61 59-123 143-208 (213)
283 cd07230 Pat_TGL4-5_like Triacy 44.4 10 0.00022 33.5 0.9 38 117-155 91-128 (421)
284 TIGR02816 pfaB_fam PfaB family 43.8 21 0.00045 32.8 2.7 32 117-149 254-286 (538)
285 COG3933 Transcriptional antite 43.3 94 0.002 27.6 6.2 75 60-146 109-183 (470)
286 PF13728 TraF: F plasmid trans 42.6 53 0.0012 26.0 4.5 44 61-104 123-166 (215)
287 PF10081 Abhydrolase_9: Alpha/ 42.4 51 0.0011 27.3 4.3 52 112-163 91-147 (289)
288 COG0218 Predicted GTPase [Gene 42.3 53 0.0011 25.6 4.2 30 91-121 72-101 (200)
289 cd07229 Pat_TGL3_like Triacylg 41.6 15 0.00032 32.1 1.3 40 117-157 101-140 (391)
290 PF14253 AbiH: Bacteriophage a 41.5 33 0.00072 28.2 3.4 13 128-140 235-247 (270)
291 cd07205 Pat_PNPLA6_PNPLA7_NTE1 41.3 41 0.00089 25.4 3.7 30 119-149 20-49 (175)
292 cd00006 PTS_IIA_man PTS_IIA, P 41.2 1.2E+02 0.0025 21.4 5.7 73 62-145 3-75 (122)
293 cd07232 Pat_PLPL Patain-like p 40.6 13 0.00029 32.7 1.0 39 117-156 85-123 (407)
294 PF12242 Eno-Rase_NADH_b: NAD( 40.5 49 0.0011 21.1 3.1 22 128-149 40-61 (78)
295 PRK09019 translation initiatio 40.2 1.2E+02 0.0027 20.9 6.8 58 59-126 43-101 (108)
296 cd07231 Pat_SDP1-like Sugar-De 39.8 17 0.00036 30.7 1.4 35 117-152 86-120 (323)
297 PRK05579 bifunctional phosphop 39.1 2.4E+02 0.0053 25.0 8.4 72 60-135 116-196 (399)
298 COG2230 Cfa Cyclopropane fatty 38.9 89 0.0019 26.0 5.3 48 112-160 56-105 (283)
299 TIGR00521 coaBC_dfp phosphopan 37.4 1.4E+02 0.0031 26.2 6.7 71 61-135 113-193 (390)
300 cd07208 Pat_hypo_Ecoli_yjju_li 37.3 42 0.00091 27.6 3.4 32 119-151 18-50 (266)
301 PF06833 MdcE: Malonate decarb 36.4 52 0.0011 26.3 3.5 57 90-148 67-129 (234)
302 KOG0781 Signal recognition par 35.5 71 0.0015 28.7 4.4 86 67-160 445-539 (587)
303 COG3887 Predicted signaling pr 35.5 77 0.0017 29.3 4.7 50 109-162 322-377 (655)
304 COG1576 Uncharacterized conser 35.4 1.2E+02 0.0027 22.5 5.0 49 88-145 67-115 (155)
305 cd07212 Pat_PNPLA9 Patatin-lik 34.4 66 0.0014 27.3 4.1 19 131-149 35-53 (312)
306 PF00448 SRP54: SRP54-type pro 34.4 2.1E+02 0.0046 22.3 6.6 64 88-159 83-148 (196)
307 PRK00091 miaA tRNA delta(2)-is 34.2 1.4E+02 0.003 25.3 5.9 72 60-133 3-99 (307)
308 PRK05282 (alpha)-aspartyl dipe 34.1 79 0.0017 25.5 4.3 85 60-146 31-130 (233)
309 cd03146 GAT1_Peptidase_E Type 34.0 1.3E+02 0.0029 23.7 5.6 83 59-144 30-129 (212)
310 cd07224 Pat_like Patatin-like 33.8 50 0.0011 26.5 3.2 33 118-150 18-51 (233)
311 cd01985 ETF The electron trans 33.8 1.4E+02 0.0031 22.6 5.6 62 90-159 62-125 (181)
312 KOG3551 Syntrophins (type beta 32.9 49 0.0011 28.5 3.0 41 32-72 449-497 (506)
313 PF01583 APS_kinase: Adenylyls 32.1 49 0.0011 24.7 2.7 36 60-96 1-38 (156)
314 PRK04148 hypothetical protein; 32.0 1.6E+02 0.0035 21.3 5.1 45 112-161 3-47 (134)
315 COG0482 TrmU Predicted tRNA(5- 31.8 1.4E+02 0.003 25.8 5.5 61 60-126 4-64 (356)
316 cd07206 Pat_TGL3-4-5_SDP1 Tria 31.1 46 0.001 27.9 2.6 32 121-153 91-122 (298)
317 cd01715 ETF_alpha The electron 31.1 92 0.002 23.4 4.1 55 88-150 51-107 (168)
318 PF02590 SPOUT_MTase: Predicte 31.0 1.1E+02 0.0025 22.7 4.4 62 88-163 67-128 (155)
319 PF03681 UPF0150: Uncharacteri 30.9 70 0.0015 17.9 2.7 32 87-122 12-43 (48)
320 COG0279 GmhA Phosphoheptose is 30.8 1.1E+02 0.0024 23.1 4.1 72 64-141 44-122 (176)
321 PRK14194 bifunctional 5,10-met 30.6 80 0.0017 26.6 3.9 35 114-148 143-182 (301)
322 PF09419 PGP_phosphatase: Mito 29.8 2.5E+02 0.0054 21.3 6.2 53 83-138 36-88 (168)
323 TIGR01626 ytfJ_HI0045 conserve 29.6 2.7E+02 0.0058 21.5 8.2 112 36-162 37-156 (184)
324 PRK00103 rRNA large subunit me 28.6 1.7E+02 0.0038 21.8 5.0 60 90-163 69-128 (157)
325 cd07204 Pat_PNPLA_like Patatin 28.1 81 0.0018 25.5 3.5 20 131-150 34-53 (243)
326 COG2939 Carboxypeptidase C (ca 27.8 68 0.0015 29.0 3.2 56 280-336 428-491 (498)
327 TIGR01361 DAHP_synth_Bsub phos 27.8 2.2E+02 0.0047 23.5 5.9 74 59-138 131-206 (260)
328 cd05312 NAD_bind_1_malic_enz N 27.3 1.3E+02 0.0028 25.1 4.4 80 63-146 27-124 (279)
329 TIGR00246 tRNA_RlmH_YbeA rRNA 26.8 1.8E+02 0.0038 21.7 4.8 59 90-163 67-125 (153)
330 PF10686 DUF2493: Protein of u 26.8 1E+02 0.0022 19.3 3.0 33 60-94 31-63 (71)
331 PF01171 ATP_bind_3: PP-loop f 26.8 1.8E+02 0.0039 22.2 5.1 79 62-146 32-115 (182)
332 PLN02840 tRNA dimethylallyltra 26.8 3E+02 0.0066 24.6 6.9 75 60-136 20-119 (421)
333 TIGR02873 spore_ylxY probable 26.7 33 0.00072 28.3 1.1 33 62-95 232-264 (268)
334 COG5441 Uncharacterized conser 26.6 3.9E+02 0.0085 22.5 7.0 94 63-157 4-122 (401)
335 PF00091 Tubulin: Tubulin/FtsZ 26.2 2.5E+02 0.0054 22.2 6.0 27 114-141 111-137 (216)
336 TIGR02764 spore_ybaN_pdaB poly 25.9 26 0.00056 27.0 0.3 33 62-95 153-188 (191)
337 PRK14974 cell division protein 25.8 3.8E+02 0.0082 23.1 7.2 65 87-159 221-287 (336)
338 cd08769 DAP_dppA_2 Peptidase M 25.7 1.8E+02 0.004 24.1 5.1 48 280-333 150-200 (270)
339 COG0324 MiaA tRNA delta(2)-iso 25.5 2.8E+02 0.0061 23.5 6.2 74 61-136 3-101 (308)
340 PF08484 Methyltransf_14: C-me 25.3 1.5E+02 0.0031 22.3 4.2 52 110-161 50-102 (160)
341 PLN02733 phosphatidylcholine-s 25.3 39 0.00084 30.2 1.3 55 281-338 370-424 (440)
342 PRK14581 hmsF outer membrane N 25.2 1.3E+02 0.0029 28.6 4.7 77 59-136 47-143 (672)
343 COG0331 FabD (acyl-carrier-pro 25.1 81 0.0018 26.7 3.1 22 125-147 83-104 (310)
344 PF02353 CMAS: Mycolic acid cy 24.5 1.4E+02 0.0029 24.8 4.2 49 109-158 42-93 (273)
345 PRK00131 aroK shikimate kinase 24.2 71 0.0015 23.8 2.5 35 60-96 3-37 (175)
346 TIGR01663 PNK-3'Pase polynucle 23.8 1.7E+02 0.0036 27.1 5.0 37 59-97 367-403 (526)
347 PF00004 AAA: ATPase family as 23.6 99 0.0021 21.6 3.0 35 64-100 1-35 (132)
348 PF05577 Peptidase_S28: Serine 23.5 67 0.0015 28.7 2.5 38 280-320 379-416 (434)
349 cd01014 nicotinamidase_related 23.4 3.1E+02 0.0067 20.2 6.1 48 116-164 89-136 (155)
350 TIGR02884 spore_pdaA delta-lac 23.4 43 0.00094 26.7 1.2 34 61-95 187-221 (224)
351 cd07220 Pat_PNPLA2 Patatin-lik 22.9 1.1E+02 0.0023 25.0 3.3 21 130-150 38-58 (249)
352 cd00382 beta_CA Carbonic anhyd 22.8 1.6E+02 0.0035 20.7 3.8 31 112-143 44-74 (119)
353 KOG4306 Glycosylphosphatidylin 22.6 4.6E+02 0.0099 22.2 6.7 44 61-104 96-142 (306)
354 PRK13703 conjugal pilus assemb 22.5 1.3E+02 0.0029 24.5 3.7 43 61-103 146-188 (248)
355 COG1092 Predicted SAM-dependen 21.9 2.2E+02 0.0047 25.2 5.1 39 88-126 290-328 (393)
356 PLN03006 carbonate dehydratase 21.7 1.7E+02 0.0038 24.6 4.3 29 113-142 158-186 (301)
357 TIGR01425 SRP54_euk signal rec 21.7 5E+02 0.011 23.4 7.3 63 88-158 182-246 (429)
358 cd07218 Pat_iPLA2 Calcium-inde 21.6 1E+02 0.0023 25.0 3.0 20 131-150 33-52 (245)
359 PRK08118 topology modulation p 21.6 3.6E+02 0.0077 20.2 6.7 85 64-162 4-88 (167)
360 cd03379 beta_CA_cladeD Carboni 21.3 1.5E+02 0.0032 21.6 3.5 27 112-139 41-67 (142)
361 PF00070 Pyr_redox: Pyridine n 21.2 2.3E+02 0.0049 17.8 4.1 32 129-163 1-32 (80)
362 TIGR02739 TraF type-F conjugat 20.9 2.2E+02 0.0047 23.4 4.6 43 61-103 153-195 (256)
363 PF13709 DUF4159: Domain of un 20.8 2.8E+02 0.0061 21.8 5.2 56 278-334 54-110 (207)
364 cd03129 GAT1_Peptidase_E_like 20.6 4E+02 0.0087 20.8 6.1 17 129-145 114-130 (210)
365 PRK14181 bifunctional 5,10-met 20.6 2.5E+02 0.0053 23.6 4.9 46 114-160 137-187 (287)
366 PF02882 THF_DHG_CYH_C: Tetrah 20.6 1.7E+02 0.0037 22.0 3.7 36 113-148 19-59 (160)
367 cd07221 Pat_PNPLA3 Patatin-lik 20.6 1.2E+02 0.0027 24.7 3.2 21 130-150 34-54 (252)
368 PLN02200 adenylate kinase fami 20.5 1.7E+02 0.0036 23.6 4.0 34 59-94 41-74 (234)
369 PF03880 DbpA: DbpA RNA bindin 20.4 1.8E+02 0.0039 18.2 3.4 57 280-336 3-62 (74)
370 COG0622 Predicted phosphoester 20.3 1.7E+02 0.0038 22.2 3.8 82 60-163 52-136 (172)
371 PF03490 Varsurf_PPLC: Variant 20.3 1.3E+02 0.0028 17.3 2.2 26 108-134 6-31 (51)
372 PRK08305 spoVFB dipicolinate s 20.2 2.5E+02 0.0054 22.0 4.6 68 60-131 121-191 (196)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.9e-36 Score=252.67 Aligned_cols=267 Identities=18% Similarity=0.147 Sum_probs=175.3
Q ss_pred ccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--------
Q 037354 35 DAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP-------- 106 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-------- 106 (346)
+.++++. +|.+++|...|+ ++++|||+||+++++..|..+++.|+++ |+|+++|+||||.|+.+.
T Consensus 9 ~~~~~~~-~~~~i~y~~~G~----~~~~vlllHG~~~~~~~w~~~~~~L~~~--~~vi~~DlpG~G~S~~~~~~~~~~~~ 81 (294)
T PLN02824 9 ETRTWRW-KGYNIRYQRAGT----SGPALVLVHGFGGNADHWRKNTPVLAKS--HRVYAIDLLGYGYSDKPNPRSAPPNS 81 (294)
T ss_pred CCceEEE-cCeEEEEEEcCC----CCCeEEEECCCCCChhHHHHHHHHHHhC--CeEEEEcCCCCCCCCCCccccccccc
Confidence 4567777 899999999985 2579999999999999999999999875 689999999999998642
Q ss_pred cccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCC-CCCCCcchhhHHHhhhhhh
Q 037354 107 RRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYE-WPSLPQSLIRTDYRRRLIQ 185 (346)
Q Consensus 107 ~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 185 (346)
.++++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++..... ....+ ....... .....
T Consensus 82 ~~~~~~~a~~l~~~l~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~-~~~~~ 158 (294)
T PLN02824 82 FYTFETWGEQLNDFCSDVVG-DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQP-WLGRPFI-KAFQN 158 (294)
T ss_pred cCCHHHHHHHHHHHHHHhcC-CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccc-hhhhHHH-HHHHH
Confidence 36999999999999999998 799999999999999999999999999999999864211 00000 0000000 00000
Q ss_pred hHHH--HHh-h-----chhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhh
Q 037354 186 WSLW--IAK-H-----IPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVA 257 (346)
Q Consensus 186 ~~~~--~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (346)
.... ... . ....+...+...+.. .... ..+....+...... .. ....+...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~-~~--~~~~~~~~~~----- 219 (294)
T PLN02824 159 LLRETAVGKAFFKSVATPETVKNILCQCYHD--------DSAV---TDELVEAILRPGLE-PG--AVDVFLDFIS----- 219 (294)
T ss_pred HHhchhHHHHHHHhhcCHHHHHHHHHHhccC--------hhhc---cHHHHHHHHhccCC-ch--HHHHHHHHhc-----
Confidence 0000 000 0 000000000000000 0001 11111221111000 00 0000000000
Q ss_pred hcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhc
Q 037354 258 AFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 258 ~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
... .......++++++|+|+|+|++|.++|.+..+.+.+..+++++++++++||+++.| |+++++.|.+|+++
T Consensus 220 -~~~----~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 220 -YSG----GPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred -ccc----ccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 000 00111224567777999999999999999998888888889999999999999999 99999999999975
No 2
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=235.02 Aligned_cols=281 Identities=18% Similarity=0.225 Sum_probs=182.2
Q ss_pred ccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc---ccHH
Q 037354 35 DAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR---RTVK 111 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~---~~~~ 111 (346)
+..+++. +|.+++|...|++ ++|.|+++||++.+...|+.+...|+.. ||+|+++|+||+|.|+.++. |++.
T Consensus 23 ~hk~~~~-~gI~~h~~e~g~~---~gP~illlHGfPe~wyswr~q~~~la~~-~~rviA~DlrGyG~Sd~P~~~~~Yt~~ 97 (322)
T KOG4178|consen 23 SHKFVTY-KGIRLHYVEGGPG---DGPIVLLLHGFPESWYSWRHQIPGLASR-GYRVIAPDLRGYGFSDAPPHISEYTID 97 (322)
T ss_pred ceeeEEE-ccEEEEEEeecCC---CCCEEEEEccCCccchhhhhhhhhhhhc-ceEEEecCCCCCCCCCCCCCcceeeHH
Confidence 5666666 8899999999886 6899999999999999999999999987 79999999999999998764 7999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCC--------CCCCcchhhHHHhhhh
Q 037354 112 SEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEW--------PSLPQSLIRTDYRRRL 183 (346)
Q Consensus 112 ~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~--------~~~~~~~~~~~~~~~~ 183 (346)
.++.|+.+++++++. ++++++||+||+++|+.+|..+|++|+++|+++.....+. ..+..+...-.++...
T Consensus 98 ~l~~di~~lld~Lg~-~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~ 176 (322)
T KOG4178|consen 98 ELVGDIVALLDHLGL-KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPG 176 (322)
T ss_pred HHHHHHHHHHHHhcc-ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccC
Confidence 999999999999998 7999999999999999999999999999999997654100 0000000000000000
Q ss_pred hhhHHHHHh-hchhhhHHHHhhhcCCCcc---cccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhc
Q 037354 184 IQWSLWIAK-HIPGLLYWWISQKVVPSTS---VLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAF 259 (346)
Q Consensus 184 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (346)
. ....+.. ....+....+..+...... .....+..++.++.+.+......... ...-.+.+. ..
T Consensus 177 ~-~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~----~gplNyyrn-------~~ 244 (322)
T KOG4178|consen 177 K-PETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGF----TGPLNYYRN-------FR 244 (322)
T ss_pred c-chhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccc----cccchhhHH-------Hh
Confidence 0 0000000 0000111111111110000 00011122333333333322211110 111111222 22
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhH-HHHHHHhcCCc-eEEEecCCCcceeec-cchhHHHHHHHhhcc
Q 037354 260 GDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQL-QRFISRKLSWI-KYHEVRDGGHLILHY-NGMCDYFLRALLVGE 336 (346)
Q Consensus 260 ~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~-~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 336 (346)
.+|. .....+.++++|+++++|++|.+.+... ...+.+.+|+. +.++++|+||+++.| |+++++.|.+|+++.
T Consensus 245 r~w~----a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 245 RNWE----AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred hCch----hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 2221 1122234455559999999999998773 45666667776 789999999999999 999999999999875
Q ss_pred c
Q 037354 337 E 337 (346)
Q Consensus 337 ~ 337 (346)
+
T Consensus 321 ~ 321 (322)
T KOG4178|consen 321 S 321 (322)
T ss_pred c
Confidence 4
No 3
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2.5e-35 Score=243.58 Aligned_cols=263 Identities=18% Similarity=0.220 Sum_probs=172.8
Q ss_pred cceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC-cccHHHHH
Q 037354 36 AARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP-RRTVKSEA 114 (346)
Q Consensus 36 ~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~ 114 (346)
.+++++ +|.+++|...+.+. .+++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+. .+++++++
T Consensus 4 ~~~~~~-~~~~~~~~~~~~~~--~~~plvllHG~~~~~~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 78 (276)
T TIGR02240 4 FRTIDL-DGQSIRTAVRPGKE--GLTPLLIFNGIGANLELVFPFIEALDP--DLEVIAFDVPGVGGSSTPRHPYRFPGLA 78 (276)
T ss_pred EEEecc-CCcEEEEEEecCCC--CCCcEEEEeCCCcchHHHHHHHHHhcc--CceEEEECCCCCCCCCCCCCcCcHHHHH
Confidence 445666 88899998864221 457999999999999999999999876 4899999999999998654 46899999
Q ss_pred HHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhc
Q 037354 115 FDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHI 194 (346)
Q Consensus 115 ~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (346)
+++.++++++++ ++++|+||||||.+++.+|.++|++|+++|++++....... +. .. .... ..........
T Consensus 79 ~~~~~~i~~l~~-~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~-~~-~~~~-~~~~~~~~~~--- 149 (276)
T TIGR02240 79 KLAARMLDYLDY-GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMV--PG-KP-KVLM-MMASPRRYIQ--- 149 (276)
T ss_pred HHHHHHHHHhCc-CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccC--CC-ch-hHHH-HhcCchhhhc---
Confidence 999999999998 69999999999999999999999999999999987532100 00 00 0000 0000000000
Q ss_pred hhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCC
Q 037354 195 PGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFP 274 (346)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~ 274 (346)
... .......++... .. .+.+........... . . ......... .. ..+ ....-+.
T Consensus 150 ~~~-~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~-~--~-~~~~~~~~~----~~-~~~-----~~~~~l~ 204 (276)
T TIGR02240 150 PSH-GIHIAPDIYGGA---------FR-RDPELAMAHASKVRS-G--G-KLGYYWQLF----AG-LGW-----TSIHWLH 204 (276)
T ss_pred ccc-ccchhhhhccce---------ee-ccchhhhhhhhhccc-C--C-CchHHHHHH----HH-cCC-----chhhHhh
Confidence 000 000000000000 00 000111000000000 0 0 000000000 00 001 0112245
Q ss_pred CCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhcccc
Q 037354 275 HNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGEES 338 (346)
Q Consensus 275 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~~~ 338 (346)
++++|+|+|+|++|+++|++..+.+.+.+++++++++++ ||+++.| |+++++.|.+|+++.++
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhh
Confidence 566779999999999999999999999999999999985 9999999 99999999999998776
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.1e-35 Score=244.79 Aligned_cols=279 Identities=13% Similarity=0.028 Sum_probs=178.0
Q ss_pred eeccCCCCCccccceeecCCC-----ceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCC
Q 037354 24 IDVDDNGDGLVDAARIRLSDG-----RYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAG 98 (346)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~g-----~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G 98 (346)
..+++...+|....++.+ ++ .+++|...|.+ ++|+|||+||++++...|..+++.|.+. ||+|+++|+||
T Consensus 9 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~y~~~G~~---~~~~lvliHG~~~~~~~w~~~~~~L~~~-gy~vi~~Dl~G 83 (302)
T PRK00870 9 SRFENLPDYPFAPHYVDV-DDGDGGPLRMHYVDEGPA---DGPPVLLLHGEPSWSYLYRKMIPILAAA-GHRVIAPDLIG 83 (302)
T ss_pred ccccCCcCCCCCceeEee-cCCCCceEEEEEEecCCC---CCCEEEEECCCCCchhhHHHHHHHHHhC-CCEEEEECCCC
Confidence 345556677888888888 55 78999999875 4679999999999999999999999865 89999999999
Q ss_pred CCCCCCCC---cccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchh
Q 037354 99 YGESDPNP---RRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLI 175 (346)
Q Consensus 99 ~G~S~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~ 175 (346)
||.|+.+. .++++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++......... ...
T Consensus 84 ~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~ 160 (302)
T PRK00870 84 FGRSDKPTRREDYTYARHVEWMRSWFEQLDL-TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPM--PDA 160 (302)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHcCC-CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccc--hHH
Confidence 99997643 36899999999999999998 6999999999999999999999999999999997532110000 000
Q ss_pred hHHHhhhhhhhHHHHHhhchhh-hHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhh
Q 037354 176 RTDYRRRLIQWSLWIAKHIPGL-LYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGD 254 (346)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (346)
...+.... ...+.. .......... .... .+....+................ ..+...
T Consensus 161 ~~~~~~~~--------~~~~~~~~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 218 (302)
T PRK00870 161 FWAWRAFS--------QYSPVLPVGRLVNGGTV----------RDLS---DAVRAAYDAPFPDESYKAGARAF-PLLVPT 218 (302)
T ss_pred Hhhhhccc--------ccCchhhHHHHhhcccc----------ccCC---HHHHHHhhcccCChhhhcchhhh-hhcCCC
Confidence 00111000 000000 0000000000 0000 01111110000000000000000 000000
Q ss_pred hhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCce---EEEecCCCcceeec-cchhHHHHH
Q 037354 255 VVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIK---YHEVRDGGHLILHY-NGMCDYFLR 330 (346)
Q Consensus 255 ~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~~~~e-~~~~~~~i~ 330 (346)
... ..... ........+.++++|+++|+|++|.++|... +.+.+.+++++ +++++++||++++| |+++++.|.
T Consensus 219 ~~~-~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 295 (302)
T PRK00870 219 SPD-DPAVA-ANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVL 295 (302)
T ss_pred CCC-CcchH-HHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHH
Confidence 000 00000 0000001234566669999999999999766 88899898876 89999999999999 999999999
Q ss_pred HHhhc
Q 037354 331 ALLVG 335 (346)
Q Consensus 331 ~fl~~ 335 (346)
+|+++
T Consensus 296 ~fl~~ 300 (302)
T PRK00870 296 EFIRA 300 (302)
T ss_pred HHHhc
Confidence 99975
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.8e-34 Score=240.93 Aligned_cols=275 Identities=16% Similarity=0.122 Sum_probs=171.9
Q ss_pred ccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC-cccHHHH
Q 037354 35 DAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP-RRTVKSE 113 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~ 113 (346)
+..+++. +|.+++|...|+ +++|||+||++++...|..+++.|.+. ++|+++|+||||.|+.+. .++++++
T Consensus 8 ~~~~~~~-~g~~i~y~~~G~-----g~~vvllHG~~~~~~~w~~~~~~L~~~--~~via~D~~G~G~S~~~~~~~~~~~~ 79 (295)
T PRK03592 8 EMRRVEV-LGSRMAYIETGE-----GDPIVFLHGNPTSSYLWRNIIPHLAGL--GRCLAPDLIGMGASDKPDIDYTFADH 79 (295)
T ss_pred cceEEEE-CCEEEEEEEeCC-----CCEEEEECCCCCCHHHHHHHHHHHhhC--CEEEEEcCCCCCCCCCCCCCCCHHHH
Confidence 4556666 899999999984 479999999999999999999999886 589999999999998754 4799999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCC-CCCCCcchhhHHHhhhhhhhHHHHHh
Q 037354 114 AFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYE-WPSLPQSLIRTDYRRRLIQWSLWIAK 192 (346)
Q Consensus 114 ~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
++|+.+++++++. ++++++||||||.+|+.++.++|++|+++|++++..... +..+.. .... ....+..
T Consensus 80 a~dl~~ll~~l~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~-----~~~~----~~~~~~~ 149 (295)
T PRK03592 80 ARYLDAWFDALGL-DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPP-----AVRE----LFQALRS 149 (295)
T ss_pred HHHHHHHHHHhCC-CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcch-----hHHH----HHHHHhC
Confidence 9999999999998 799999999999999999999999999999999843210 000100 0000 0000000
Q ss_pred hc--hhhh--HHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhh-cCCCCCCCC
Q 037354 193 HI--PGLL--YWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAA-FGDWGFDPV 267 (346)
Q Consensus 193 ~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 267 (346)
.. .... ...+...++... ....+...+...+......... ............... .........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (295)
T PRK03592 150 PGEGEEMVLEENVFIERVLPGS-----ILRPLSDEEMAVYRRPFPTPES------RRPTLSWPRELPIDGEPADVVALVE 218 (295)
T ss_pred cccccccccchhhHHhhcccCc-----ccccCCHHHHHHHHhhcCCchh------hhhhhhhhhhcCCCCcchhhHhhhh
Confidence 00 0000 000001111100 0001111111111111111000 000000000000000 000000000
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCchhHH-HHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhcccc
Q 037354 268 RLSNPFPHNESSVHIWQGYEDKVVPFQLQ-RFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGEES 338 (346)
Q Consensus 268 ~i~~p~~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~~~ 338 (346)
....-+.++++|+|+|+|++|.++++... +.+.+..+++++++++++||+++.| |+++++.|.+|+++...
T Consensus 219 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 219 EYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred HhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 11122445666799999999999955444 4455667899999999999999999 99999999999987654
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=7.6e-34 Score=241.90 Aligned_cols=272 Identities=18% Similarity=0.188 Sum_probs=174.1
Q ss_pred ccccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcc-cccchHHHHHhcCeEEEEECCCCCCCCCCCCc--cc
Q 037354 33 LVDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEM-NFPASQELIESLGIYFVLYDRAGYGESDPNPR--RT 109 (346)
Q Consensus 33 ~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~-~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~ 109 (346)
.+++.++...+|.+++|..++++..+.+++|||+||++++... |..++..|++. ||+|+++|+||||.|+.... .+
T Consensus 60 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~ 138 (349)
T PLN02385 60 KTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASS-GYGVFAMDYPGFGLSEGLHGYIPS 138 (349)
T ss_pred ceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCCCcCC
Confidence 3445566677999999999987654567899999999988764 57888888866 89999999999999987544 38
Q ss_pred HHHHHHHHHHHHHHcCC-----CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhh
Q 037354 110 VKSEAFDIVELADQLQL-----GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLI 184 (346)
Q Consensus 110 ~~~~~~~l~~~l~~l~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (346)
++++++|+.++++.++. +.+++|+||||||.+++.++.++|++|+++||++|.........+... ..
T Consensus 139 ~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~----~~---- 210 (349)
T PLN02385 139 FDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPL----VL---- 210 (349)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchH----HH----
Confidence 99999999999987753 137999999999999999999999999999999987542111011100 00
Q ss_pred hhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCC
Q 037354 185 QWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGF 264 (346)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (346)
.....+....+. ..+++.... ....+................. ...........+.. ..
T Consensus 211 ~~~~~~~~~~p~-------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~-~~-------- 269 (349)
T PLN02385 211 QILILLANLLPK-------AKLVPQKDL---AELAFRDLKKRKMAEYNVIAYK--DKPRLRTAVELLRT-TQ-------- 269 (349)
T ss_pred HHHHHHHHHCCC-------ceecCCCcc---ccccccCHHHHHHhhcCcceeC--CCcchHHHHHHHHH-HH--------
Confidence 000011111000 000000000 0000110001111111000000 00000011111110 00
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc--CCceEEEecCCCcceeec-cch----hHHHHHHHhhccc
Q 037354 265 DPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL--SWIKYHEVRDGGHLILHY-NGM----CDYFLRALLVGEE 337 (346)
Q Consensus 265 ~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-~~~----~~~~i~~fl~~~~ 337 (346)
.+...+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||+++.| |++ +.+.|.+||++..
T Consensus 270 ---~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 270 ---EIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred ---HHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 112234455666999999999999999999998887 568999999999999987 876 7888999998653
No 7
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.6e-34 Score=243.32 Aligned_cols=277 Identities=17% Similarity=0.138 Sum_probs=169.1
Q ss_pred ceeecCCCc-eEEEEEcCCCC-CCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--cccHHH
Q 037354 37 ARIRLSDGR-YLAYREKGVSK-IESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP--RRTVKS 112 (346)
Q Consensus 37 ~~~~~~~g~-~l~~~~~g~~~-~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~ 112 (346)
.++.. +|. +++|...|++. ...+|+|||+||++++...|.+++..|.+ +|+|+++|+||||.|+.+. .+++++
T Consensus 64 ~~~~~-~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~--~~~via~Dl~G~G~S~~~~~~~~~~~~ 140 (360)
T PLN02679 64 KKWKW-KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK--NYTVYAIDLLGFGASDKPPGFSYTMET 140 (360)
T ss_pred ceEEE-CCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCCCCccccHHH
Confidence 34555 565 99999998641 11358999999999999999999998876 6999999999999998754 468999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHh-hccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHH
Q 037354 113 EAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLK-YIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIA 191 (346)
Q Consensus 113 ~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~-~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
+++++.+++++++. ++++++||||||.+++.++. .+|++|+++|++++.............. .............+.
T Consensus 141 ~a~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 218 (360)
T PLN02679 141 WAELILDFLEEVVQ-KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWR-IKLLLPLLWLIDFLL 218 (360)
T ss_pred HHHHHHHHHHHhcC-CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHH-HhhhcchHHHHHHHh
Confidence 99999999999998 79999999999999999887 4799999999999864321110000000 000000000000000
Q ss_pred h---hchhhhHH----HHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCC
Q 037354 192 K---HIPGLLYW----WISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGF 264 (346)
Q Consensus 192 ~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (346)
. .....+.. .....++... ........ .+....+.. ..... .....+..... . ...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~-~~~~~--~~~~~~~~~~~-~----~~~--- 281 (360)
T PLN02679 219 KQRGIASALFNRVKQRDNLKNILLSV---YGNKEAVD---DELVEIIRG-PADDE--GALDAFVSIVT-G----PPG--- 281 (360)
T ss_pred hchhhHHHHHHHhcCHHHHHHHHHHh---ccCcccCC---HHHHHHHHh-hccCC--ChHHHHHHHHh-c----CCC---
Confidence 0 00000000 0000000000 00000111 111111110 00000 00000110000 0 000
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCchhH-----HHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhccc
Q 037354 265 DPVRLSNPFPHNESSVHIWQGYEDKVVPFQL-----QRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGEE 337 (346)
Q Consensus 265 ~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~-----~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~~ 337 (346)
.+....++++++|+|+|+|++|.++|++. .+.+.+.+|++++++++++||+++.| |+++++.|.+||++..
T Consensus 282 --~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 282 --PNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred --CCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 01112244566779999999999998763 24566778999999999999999999 9999999999998653
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.9e-33 Score=229.97 Aligned_cols=252 Identities=16% Similarity=0.169 Sum_probs=158.7
Q ss_pred eEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcC
Q 037354 46 YLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQ 125 (346)
Q Consensus 46 ~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~ 125 (346)
.++|...|.+ .|+|||+||+++++..|..++..|.+. |+|+++|+||||.|+....++++++++++.+ +.
T Consensus 3 ~~~y~~~G~g----~~~ivllHG~~~~~~~w~~~~~~L~~~--~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~----~~ 72 (256)
T PRK10349 3 NIWWQTKGQG----NVHLVLLHGWGLNAEVWRCIDEELSSH--FTLHLVDLPGFGRSRGFGALSLADMAEAVLQ----QA 72 (256)
T ss_pred ccchhhcCCC----CCeEEEECCCCCChhHHHHHHHHHhcC--CEEEEecCCCCCCCCCCCCCCHHHHHHHHHh----cC
Confidence 3778888752 357999999999999999999999764 8999999999999987656688777777653 45
Q ss_pred CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhh
Q 037354 126 LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQK 205 (346)
Q Consensus 126 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (346)
. ++++++||||||.+++.+|.++|++|+++|++++.+........... ...+.. .+...+..........++...
T Consensus 73 ~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 147 (256)
T PRK10349 73 P-DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGI-KPDVLA---GFQQQLSDDFQRTVERFLALQ 147 (256)
T ss_pred C-CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcc-cHHHHH---HHHHHHHhchHHHHHHHHHHH
Confidence 6 69999999999999999999999999999999986432110000000 000000 000001000000111111000
Q ss_pred cCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEec
Q 037354 206 VVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQG 285 (346)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G 285 (346)
.+.. ...................... .........+. . .++...+.++++|+|+|+|
T Consensus 148 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--------~-----~~~~~~l~~i~~P~lii~G 204 (256)
T PRK10349 148 TMGT--------ETARQDARALKKTVLALPMPEV--DVLNGGLEILK--------T-----VDLRQPLQNVSMPFLRLYG 204 (256)
T ss_pred HccC--------chHHHHHHHHHHHhhccCCCcH--HHHHHHHHHHH--------h-----CccHHHHhhcCCCeEEEec
Confidence 0000 0000000111111111110000 00000000000 0 0222344556777999999
Q ss_pred CCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhc
Q 037354 286 YEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 286 ~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
++|.++|.+..+.+.+.++++++++++++||++++| |++|++.|.+|-++
T Consensus 205 ~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 205 YLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999 99999999999654
No 9
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.1e-32 Score=228.64 Aligned_cols=269 Identities=17% Similarity=0.133 Sum_probs=174.1
Q ss_pred ccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--cccHHH
Q 037354 35 DAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP--RRTVKS 112 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~ 112 (346)
...++++ +|.+++|...|+. .+++|||+||++++...|..+.+.|.+ +|+|+++|+||||.|+.+. .+++++
T Consensus 7 ~~~~~~~-~~~~~~~~~~g~~---~~~~vv~~hG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~ 80 (278)
T TIGR03056 7 CSRRVTV-GPFHWHVQDMGPT---AGPLLLLLHGTGASTHSWRDLMPPLAR--SFRVVAPDLPGHGFTRAPFRFRFTLPS 80 (278)
T ss_pred ccceeeE-CCEEEEEEecCCC---CCCeEEEEcCCCCCHHHHHHHHHHHhh--CcEEEeecCCCCCCCCCccccCCCHHH
Confidence 4445666 8999999998864 468999999999999999999999876 5999999999999998654 469999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHh
Q 037354 113 EAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAK 192 (346)
Q Consensus 113 ~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
+++|+.++++++++ ++++++||||||.+++.+|..+|++++++|++++...... ...... ..... .... ...
T Consensus 81 ~~~~l~~~i~~~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-~~~~~~-~~~~~----~~~~-~~~ 152 (278)
T TIGR03056 81 MAEDLSALCAAEGL-SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFE-GMAGTL-FPYMA----RVLA-CNP 152 (278)
T ss_pred HHHHHHHHHHHcCC-CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccc-cccccc-cchhh----Hhhh-hcc
Confidence 99999999999998 6999999999999999999999999999999998643110 000000 00000 0000 000
Q ss_pred hchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCC
Q 037354 193 HIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNP 272 (346)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p 272 (346)
............. .....................+........ .... .......|. .......
T Consensus 153 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--------~~~~~~~~~--~~~~~~~ 215 (278)
T TIGR03056 153 FTPPMMSRGAADQ-QRVERLIRDTGSLLDKAGMTYYGRLIRSPA------HVDG--------ALSMMAQWD--LAPLNRD 215 (278)
T ss_pred cchHHHHhhcccC-cchhHHhhccccccccchhhHHHHhhcCch------hhhH--------HHHHhhccc--ccchhhh
Confidence 0000000000000 000000000000001001111111000000 0000 000111111 1122234
Q ss_pred CCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhh
Q 037354 273 FPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLV 334 (346)
Q Consensus 273 ~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 334 (346)
++++++|+++|+|++|..+|.+..+.+.+.++++++++++++||+++.| |+++++.|.+|++
T Consensus 216 ~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 216 LPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 5667788999999999999999999999999999999999999999999 9999999999985
No 10
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.4e-32 Score=225.00 Aligned_cols=251 Identities=16% Similarity=0.086 Sum_probs=166.1
Q ss_pred eEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcC
Q 037354 46 YLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQ 125 (346)
Q Consensus 46 ~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~ 125 (346)
+++|+..+.....++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|.....++++++++|+.+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~ 79 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN--DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQ 79 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh--CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 4667776554445789999999999999999999999876 58999999999999998778899999999999999999
Q ss_pred CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchh-hhHHHHhh
Q 037354 126 LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPG-LLYWWISQ 204 (346)
Q Consensus 126 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 204 (346)
. ++++++||||||.+++.+|.++|++|+++|++++.+.... .......+. .... ... ...... .....+.
T Consensus 80 ~-~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~----~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~- 150 (255)
T PRK10673 80 I-EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH----VRRHDEIFA-AINA-VSE-AGATTRQQAAAIMR- 150 (255)
T ss_pred C-CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc----chhhHHHHH-HHHH-hhh-cccccHHHHHHHHH-
Confidence 8 6899999999999999999999999999999986532110 000000000 0000 000 000000 0000000
Q ss_pred hcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEe
Q 037354 205 KVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQ 284 (346)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~ 284 (346)
..+. ................. ..........+ .. ... ...++++++|+|+|+
T Consensus 151 ~~~~------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~-~~~--------~~~~~~~~~P~l~i~ 202 (255)
T PRK10673 151 QHLN------------EEGVIQFLLKSFVDGEW---RFNVPVLWDQY----PH-IVG--------WEKIPAWPHPALFIR 202 (255)
T ss_pred HhcC------------CHHHHHHHHhcCCccee---EeeHHHHHHhH----HH-HhC--------CcccCCCCCCeEEEE
Confidence 0000 00000011111000000 00000000000 00 000 113345667799999
Q ss_pred cCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhc
Q 037354 285 GYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 285 G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
|++|..++.+..+.+.+.++++++++++++||+++.+ |+++++.|.+||++
T Consensus 203 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 203 GGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998 99999999999975
No 11
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=6.8e-33 Score=226.21 Aligned_cols=247 Identities=14% Similarity=0.080 Sum_probs=159.0
Q ss_pred eEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--cccHHHHHHHHHHHHHHcCCCCeEEEEEEccC
Q 037354 61 YRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP--RRTVKSEAFDIVELADQLQLGSKFYVIGVSIG 138 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~G 138 (346)
-+|||+||++.+...|..+++.|.+. +|+|+++|+||||.|+.+. .++++++++|+.++++.++..++++++|||||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmG 82 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIG 82 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcc
Confidence 36999999999999999999999755 7999999999999997543 46899999999999999986349999999999
Q ss_pred hHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCc
Q 037354 139 SYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPV 218 (346)
Q Consensus 139 g~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (346)
|.+++.++.++|++|+++|++++..... .......+...... . .... ...+.... .....
T Consensus 83 G~ia~~~a~~~p~~v~~lvl~~~~~~~~-----~~~~~~~~~~~~~~----~----~~~~-----~~~~~~~~--~~~~~ 142 (255)
T PLN02965 83 GGSVTEALCKFTDKISMAIYVAAAMVKP-----GSIISPRLKNVMEG----T----EKIW-----DYTFGEGP--DKPPT 142 (255)
T ss_pred hHHHHHHHHhCchheeEEEEEccccCCC-----CCCccHHHHhhhhc----c----ccce-----eeeeccCC--CCCcc
Confidence 9999999999999999999999863210 00000000000000 0 0000 00000000 00000
Q ss_pred cCccccHHHHhh-hcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHH
Q 037354 219 YFSDRDIEVLKT-TKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQR 297 (346)
Q Consensus 219 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~ 297 (346)
... ...+.... +...... . .. ......+........ .....+...+.++++|+++++|++|.++|++..+
T Consensus 143 ~~~-~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~ 213 (255)
T PLN02965 143 GIM-MKPEFVRHYYYNQSPL-E--DY-TLSSKLLRPAPVRAF----QDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQD 213 (255)
T ss_pred hhh-cCHHHHHHHHhcCCCH-H--HH-HHHHHhcCCCCCcch----hhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHH
Confidence 000 00011101 1111000 0 00 000000000000000 0011122234457777999999999999999999
Q ss_pred HHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhccc
Q 037354 298 FISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGEE 337 (346)
Q Consensus 298 ~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~~ 337 (346)
.+.+.+|++++++++++||+++.| |++|++.|.+|++..+
T Consensus 214 ~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 214 VMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred HHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999 9999999999998764
No 12
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.6e-32 Score=225.80 Aligned_cols=267 Identities=15% Similarity=0.118 Sum_probs=170.4
Q ss_pred CCccccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--cc
Q 037354 31 DGLVDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP--RR 108 (346)
Q Consensus 31 ~~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~ 108 (346)
..+++..++++ +|.+++|...|. +++|||+||++.+...|..++..|.+ +|+|+++|+||||.|+.+. .+
T Consensus 11 ~~~~~~~~~~~-~~~~i~y~~~G~-----~~~iv~lHG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~ 82 (286)
T PRK03204 11 LYPFESRWFDS-SRGRIHYIDEGT-----GPPILLCHGNPTWSFLYRDIIVALRD--RFRCVAPDYLGFGLSERPSGFGY 82 (286)
T ss_pred cccccceEEEc-CCcEEEEEECCC-----CCEEEEECCCCccHHHHHHHHHHHhC--CcEEEEECCCCCCCCCCCCcccc
Confidence 34567778888 788999999884 47999999999988889988888876 5999999999999998654 46
Q ss_pred cHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHH
Q 037354 109 TVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSL 188 (346)
Q Consensus 109 ~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (346)
+.+++++++.+++++++. ++++++||||||.+++.++..+|++|+++|++++... + ........+.........
T Consensus 83 ~~~~~~~~~~~~~~~~~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~---~--~~~~~~~~~~~~~~~~~~ 156 (286)
T PRK03204 83 QIDEHARVIGEFVDHLGL-DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFW---P--ADTLAMKAFSRVMSSPPV 156 (286)
T ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEEECccHHHHHHHHHhChhheeEEEEECcccc---C--CCchhHHHHHHHhccccc
Confidence 899999999999999998 6999999999999999999999999999999887531 1 000001111100000000
Q ss_pred HHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhH---HHHhhhhhhhhcCCCCCC
Q 037354 189 WIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSV---FYALRGDVVAAFGDWGFD 265 (346)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 265 (346)
. ... .....+..+++... .....+ .+....+...... .. ..... ...+.. ....
T Consensus 157 ~-~~~---~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~-~~~~------- 213 (286)
T PRK03204 157 Q-YAI---LRRNFFVERLIPAG-----TEHRPS---SAVMAHYRAVQPN-AA--ARRGVAEMPKQILA-ARPL------- 213 (286)
T ss_pred h-hhh---hhhhHHHHHhcccc-----ccCCCC---HHHHHHhcCCCCC-HH--HHHHHHHHHHhcch-hhHH-------
Confidence 0 000 00000111111110 000111 1111111111000 00 00000 000000 0000
Q ss_pred CCCCCCCCC--CCCCcEEEEecCCCCCCchh-HHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhh
Q 037354 266 PVRLSNPFP--HNESSVHIWQGYEDKVVPFQ-LQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLV 334 (346)
Q Consensus 266 ~~~i~~p~~--~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 334 (346)
+..+...+. .+++|+++|+|++|.++++. ..+.+.+.+|++++++++++||+++.| |+++++.|.+||.
T Consensus 214 ~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 214 LARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred HHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 000100000 12566999999999988655 568899999999999999999999999 9999999999973
No 13
>PLN02578 hydrolase
Probab=100.00 E-value=1.4e-32 Score=234.05 Aligned_cols=269 Identities=16% Similarity=0.130 Sum_probs=170.4
Q ss_pred ceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC-cccHHHHHH
Q 037354 37 ARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP-RRTVKSEAF 115 (346)
Q Consensus 37 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~ 115 (346)
.++.. +|.+++|...|+ +++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+. .++.+++++
T Consensus 69 ~~~~~-~~~~i~Y~~~g~-----g~~vvliHG~~~~~~~w~~~~~~l~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~a~ 140 (354)
T PLN02578 69 NFWTW-RGHKIHYVVQGE-----GLPIVLIHGFGASAFHWRYNIPELAK--KYKVYALDLLGFGWSDKALIEYDAMVWRD 140 (354)
T ss_pred eEEEE-CCEEEEEEEcCC-----CCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCcccccCHHHHHH
Confidence 33444 788999998874 46899999999999999999899876 5999999999999998754 579999999
Q ss_pred HHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcch----hhHHHhhhhh-hhHHHH
Q 037354 116 DIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSL----IRTDYRRRLI-QWSLWI 190 (346)
Q Consensus 116 ~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~ 190 (346)
++.++++.+.. ++++++|||+||.+++.+|.++|++|+++|++++...+......... .......... ......
T Consensus 141 ~l~~~i~~~~~-~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (354)
T PLN02578 141 QVADFVKEVVK-EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWF 219 (354)
T ss_pred HHHHHHHHhcc-CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHH
Confidence 99999999987 79999999999999999999999999999999986543211110000 0000000000 000000
Q ss_pred Hhhc----------hhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcC
Q 037354 191 AKHI----------PGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFG 260 (346)
Q Consensus 191 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (346)
.... +..+.... ...+. ..... +............. . .....+...+..... ...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~---~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~-~~~ 284 (354)
T PLN02578 220 QRVVLGFLFWQAKQPSRIESVL-KSVYK-------DKSNV---DDYLVESITEPAAD-P--NAGEVYYRLMSRFLF-NQS 284 (354)
T ss_pred HHHHHHHHHHHhcCHHHHHHHH-HHhcC-------CcccC---CHHHHHHHHhcccC-C--chHHHHHHHHHHHhc-CCC
Confidence 0000 00000000 00000 00000 01111111100000 0 000011111100000 000
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhc
Q 037354 261 DWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 261 ~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
...+..-++++++|+++|+|++|.+++.+..+.+.+.+|+++++++ ++||+++.| |+++++.|.+|++.
T Consensus 285 -----~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~~ 354 (354)
T PLN02578 285 -----RYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLSS 354 (354)
T ss_pred -----CCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHhC
Confidence 0012223456777799999999999999999999999999999999 589999999 99999999999863
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2.2e-32 Score=227.30 Aligned_cols=257 Identities=14% Similarity=0.159 Sum_probs=159.6
Q ss_pred CceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccc---hHHHHHhcCeEEEEECCCCCCCCCCCCc--ccHHHHHHHHH
Q 037354 44 GRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPA---SQELIESLGIYFVLYDRAGYGESDPNPR--RTVKSEAFDIV 118 (346)
Q Consensus 44 g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~---~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~ 118 (346)
|.+++|...|+ +++|||+||++.+...|..+ +..+.+. ||+|+++|+||||.|+.... .....+++++.
T Consensus 19 ~~~~~y~~~g~-----~~~ivllHG~~~~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~ 92 (282)
T TIGR03343 19 NFRIHYNEAGN-----GEAVIMLHGGGPGAGGWSNYYRNIGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVK 92 (282)
T ss_pred ceeEEEEecCC-----CCeEEEECCCCCchhhHHHHHHHHHHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhHHHHH
Confidence 56799998774 46899999999888878643 4455554 89999999999999986531 22235789999
Q ss_pred HHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhh
Q 037354 119 ELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLL 198 (346)
Q Consensus 119 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (346)
+++++++. ++++++||||||.+++.+|.++|++|+++|++++..... ..... .......... ..........+
T Consensus 93 ~~l~~l~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~-~~~~~~~~~~----~~~~~~~~~~~ 165 (282)
T TIGR03343 93 GLMDALDI-EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGP-SLFAP-MPMEGIKLLF----KLYAEPSYETL 165 (282)
T ss_pred HHHHHcCC-CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCc-ccccc-CchHHHHHHH----HHhcCCCHHHH
Confidence 99999999 799999999999999999999999999999999753210 00000 0000000000 00000000000
Q ss_pred HHHHhhhcCCCcccccCCCccCccccHHH-HhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCC
Q 037354 199 YWWISQKVVPSTSVLERNPVYFSDRDIEV-LKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNE 277 (346)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~ 277 (346)
........+. .........+. ....... ..................| ++...+.+++
T Consensus 166 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i~ 223 (282)
T TIGR03343 166 KQMLNVFLFD--------QSLITEELLQGRWENIQRQ---------PEHLKNFLISSQKAPLSTW-----DVTARLGEIK 223 (282)
T ss_pred HHHHhhCccC--------cccCcHHHHHhHHHHhhcC---------HHHHHHHHHhccccccccc-----hHHHHHhhCC
Confidence 0000000000 00001000000 0000000 0000000000000000011 1223355677
Q ss_pred CcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhc
Q 037354 278 SSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 278 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
+|+|+++|++|.+++++..+.+.+.+|++++++++++||+++.| |+++++.|.+||++
T Consensus 224 ~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 224 AKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred CCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 77999999999999999999999999999999999999999999 99999999999963
No 15
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=1.9e-32 Score=236.18 Aligned_cols=283 Identities=14% Similarity=0.209 Sum_probs=167.8
Q ss_pred eeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCccccc-chHHHHH--hcCeEEEEECCCCCCCCCCCC--cccHHH
Q 037354 38 RIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFP-ASQELIE--SLGIYFVLYDRAGYGESDPNP--RRTVKS 112 (346)
Q Consensus 38 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~-~~~~l~~--~~g~~vi~~D~~G~G~S~~~~--~~~~~~ 112 (346)
+..+ +|.+++|...|++....+++|||+||++++...|.. ++..|.+ +.+|+|+++|+||||.|+.+. .+++++
T Consensus 180 ~~~~-~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 180 WLSS-SNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred eEee-CCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 4444 678999999998754456899999999999999985 4466653 237999999999999998653 369999
Q ss_pred HHHHHH-HHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHH-hhhhhhhHHHH
Q 037354 113 EAFDIV-ELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDY-RRRLIQWSLWI 190 (346)
Q Consensus 113 ~~~~l~-~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 190 (346)
+++++. .++++++. ++++++||||||.+++.+|.++|++|+++|++++.... .+........ ...........
T Consensus 259 ~a~~l~~~ll~~lg~-~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 333 (481)
T PLN03087 259 HLEMIERSVLERYKV-KSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYP----VPKGVQATQYVMRKVAPRRVWP 333 (481)
T ss_pred HHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccc----cccchhHHHHHHHHhcccccCC
Confidence 999994 89999998 69999999999999999999999999999999975321 1111000000 00000000000
Q ss_pred HhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhh-------hhhHHHHhhhhhhhhcCCCC
Q 037354 191 AKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQ-------DRSVFYALRGDVVAAFGDWG 263 (346)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 263 (346)
..........++. ......... ........+.+......... ..... .......+.. ... ...
T Consensus 334 ~~~~~~~~~~w~~-~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~-~~~l~~~~~~~~~~~~~~~l~~-~i~---~~~ 403 (481)
T PLN03087 334 PIAFGASVACWYE-HISRTICLV----ICKNHRLWEFLTRLLTRNRM-RTFLIEGFFCHTHNAAWHTLHN-IIC---GSG 403 (481)
T ss_pred ccccchhHHHHHH-HHHhhhhcc----cccchHHHHHHHHHhhhhhh-hHHHHHHHHhccchhhHHHHHH-HHh---chh
Confidence 0000000000000 000000000 00000000000000000000 00000 0000000000 000 000
Q ss_pred CCCC-CCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceee-c-cchhHHHHHHHhhcc
Q 037354 264 FDPV-RLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILH-Y-NGMCDYFLRALLVGE 336 (346)
Q Consensus 264 ~~~~-~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e-~~~~~~~i~~fl~~~ 336 (346)
.... .+..-..++++|+|+|+|++|.++|++..+.+++.+|++++++++++||++++ | |+++++.|.+|.+..
T Consensus 404 ~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 404 SKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred hhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 0000 00001123556699999999999999999999999999999999999999986 7 999999999999754
No 16
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=5.3e-32 Score=229.36 Aligned_cols=272 Identities=16% Similarity=0.131 Sum_probs=167.6
Q ss_pred cccceeecCCCceEEEEEcCCCCC-CCCeEEEEEcCCCCCCc-ccccchHHHHHhcCeEEEEECCCCCCCCCCCCc--cc
Q 037354 34 VDAARIRLSDGRYLAYREKGVSKI-ESNYRIVLVHGFGSSKE-MNFPASQELIESLGIYFVLYDRAGYGESDPNPR--RT 109 (346)
Q Consensus 34 ~~~~~~~~~~g~~l~~~~~g~~~~-~~~~~vl~lhG~~~~~~-~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~ 109 (346)
.+..+++..+|.+++|+.++++.. ..+++|||+||++.+.. .|..+...|.++ ||+|+++|+||||.|+.... .+
T Consensus 32 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~ 110 (330)
T PLN02298 32 GSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQM-GFACFALDLEGHGRSEGLRAYVPN 110 (330)
T ss_pred cccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhC-CCEEEEecCCCCCCCCCccccCCC
Confidence 355678888999999998876432 35678999999986643 344556677765 99999999999999975443 38
Q ss_pred HHHHHHHHHHHHHHcCC-----CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhh
Q 037354 110 VKSEAFDIVELADQLQL-----GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLI 184 (346)
Q Consensus 110 ~~~~~~~l~~~l~~l~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (346)
++++++|+.++++.+.. +.+++|+||||||.+++.++..+|++|+++|++++....... .... +. ..
T Consensus 111 ~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~-----~~--~~ 182 (330)
T PLN02298 111 VDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDK-IRPP-----WP--IP 182 (330)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcc-cCCc-----hH--HH
Confidence 88999999999998753 137999999999999999999999999999999987532110 0000 00 00
Q ss_pred hhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCC
Q 037354 185 QWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGF 264 (346)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (346)
.....+....+... ....... ............+... .+...............+ ....
T Consensus 183 ~~~~~~~~~~~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~-------- 241 (330)
T PLN02298 183 QILTFVARFLPTLA-------IVPTADL---LEKSVKVPAKKIIAKR--NPMRYNGKPRLGTVVELL-RVTD-------- 241 (330)
T ss_pred HHHHHHHHHCCCCc-------cccCCCc---ccccccCHHHHHHHHh--CccccCCCccHHHHHHHH-HHHH--------
Confidence 00000111111000 0000000 0000000000111100 000000000000000000 0000
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc--CCceEEEecCCCcceeec-cc----hhHHHHHHHhhccc
Q 037354 265 DPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL--SWIKYHEVRDGGHLILHY-NG----MCDYFLRALLVGEE 337 (346)
Q Consensus 265 ~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-~~----~~~~~i~~fl~~~~ 337 (346)
.+...+.++++|+|+++|++|.++|++..+.+.+.+ +++++++++++||+++.+ |+ ++.+.|.+||++..
T Consensus 242 ---~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 242 ---YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred ---HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 011224455666999999999999999999988876 478999999999999986 65 46778889998765
Q ss_pred c
Q 037354 338 S 338 (346)
Q Consensus 338 ~ 338 (346)
.
T Consensus 319 ~ 319 (330)
T PLN02298 319 T 319 (330)
T ss_pred c
Confidence 4
No 17
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=6.2e-32 Score=228.83 Aligned_cols=274 Identities=17% Similarity=0.135 Sum_probs=172.9
Q ss_pred cccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC-----cc
Q 037354 34 VDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP-----RR 108 (346)
Q Consensus 34 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-----~~ 108 (346)
|........+|.+++|...|++ .+++|||+||++.+...|..++..|.+ +|+|+++|+||||.|+.+. .+
T Consensus 104 ~~~~~~~~~~~~~~~y~~~G~~---~~~~ivllHG~~~~~~~w~~~~~~L~~--~~~Via~DlpG~G~S~~p~~~~~~~y 178 (383)
T PLN03084 104 MGAQSQASSDLFRWFCVESGSN---NNPPVLLIHGFPSQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSDKPQPGYGFNY 178 (383)
T ss_pred ccceeEEcCCceEEEEEecCCC---CCCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCCcccccccC
Confidence 3344444568999999999875 468999999999999999999999875 6999999999999998654 36
Q ss_pred cHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHH
Q 037354 109 TVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSL 188 (346)
Q Consensus 109 ~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (346)
+++++++++.++++++++ ++++++|||+||.+++.+|.++|++|+++|++++.........+ ..+.........
T Consensus 179 s~~~~a~~l~~~i~~l~~-~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p-----~~l~~~~~~l~~ 252 (383)
T PLN03084 179 TLDEYVSSLESLIDELKS-DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLP-----STLSEFSNFLLG 252 (383)
T ss_pred CHHHHHHHHHHHHHHhCC-CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccch-----HHHHHHHHHHhh
Confidence 999999999999999999 69999999999999999999999999999999986421100000 000000000000
Q ss_pred HHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCC
Q 037354 189 WIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVR 268 (346)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (346)
.+....+. ......+.. .........+...+......... ...........+.... ..+..+...
T Consensus 253 ~~~~~~~~----~~~~~~~~~-----~~~~~~~~e~~~~~~~~~~~~~~--~~~~l~~~~r~~~~~l----~~~~~~l~~ 317 (383)
T PLN03084 253 EIFSQDPL----RASDKALTS-----CGPYAMKEDDAMVYRRPYLTSGS--SGFALNAISRSMKKEL----KKYIEEMRS 317 (383)
T ss_pred hhhhcchH----HHHhhhhcc-----cCccCCCHHHHHHHhccccCCcc--hHHHHHHHHHHhhccc----chhhHHHHh
Confidence 00000000 000000000 00001111111111111111000 0000001111111100 000000000
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhc
Q 037354 269 LSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 269 i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
+. ...++++|+++|+|++|.+++.+..+.+.+. +++++++++++||+++.| |+++++.|.+|+.+
T Consensus 318 ~l-~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 318 IL-TDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred hh-ccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 00 0124566799999999999999988888887 589999999999999999 99999999999863
No 18
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=1.2e-31 Score=221.90 Aligned_cols=260 Identities=12% Similarity=0.116 Sum_probs=165.9
Q ss_pred ceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc--ccHHHHH
Q 037354 37 ARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR--RTVKSEA 114 (346)
Q Consensus 37 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~ 114 (346)
.++...||.+|+|..+-+.. ..++.|+++||+++++..|..++..|.+. ||+|+++|+||||.|+.... .++.+++
T Consensus 3 ~~~~~~~g~~l~~~~~~~~~-~~~~~v~llHG~~~~~~~~~~~~~~l~~~-g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 3 NCMFNLDNDYIYCKYWKPIT-YPKALVFISHGAGEHSGRYEELAENISSL-GILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred ceeecCCCCEEEEEeccCCC-CCCEEEEEeCCCccccchHHHHHHHHHhC-CCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 35666699999999986642 35678888899999999999999999876 89999999999999975431 2666677
Q ss_pred HHHHHHHHHc----CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHH
Q 037354 115 FDIVELADQL----QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWI 190 (346)
Q Consensus 115 ~~l~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (346)
+|+.+.++.+ .. .+++++||||||.+++.+|.++|++|+++|+++|.... ... .+..........
T Consensus 81 ~d~~~~l~~~~~~~~~-~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~------~~~---~~~~~~~~~~~~- 149 (276)
T PHA02857 81 RDVVQHVVTIKSTYPG-VPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA------EAV---PRLNLLAAKLMG- 149 (276)
T ss_pred HHHHHHHHHHHhhCCC-CCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc------ccc---cHHHHHHHHHHH-
Confidence 7777777654 33 58999999999999999999999999999999986431 000 000000000000
Q ss_pred HhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCC
Q 037354 191 AKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLS 270 (346)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 270 (346)
.+.+...........+.... .....+...+....... ...+........ ..+.
T Consensus 150 --------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~ 202 (276)
T PHA02857 150 --------------IFYPNKIVGKLCPESVSRDM-DEVYKYQYDPLVNHEKI-KAGFASQVLKAT-----------NKVR 202 (276)
T ss_pred --------------HhCCCCccCCCCHhhccCCH-HHHHHHhcCCCccCCCc-cHHHHHHHHHHH-----------HHHH
Confidence 00000000000001111111 11111111111100000 000101110000 0112
Q ss_pred CCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc-CCceEEEecCCCcceeec-c---chhHHHHHHHhhcc
Q 037354 271 NPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL-SWIKYHEVRDGGHLILHY-N---GMCDYFLRALLVGE 336 (346)
Q Consensus 271 ~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e-~---~~~~~~i~~fl~~~ 336 (346)
..++++++|+|+++|++|.++|++.++.+.+.+ +++++++++++||.++.| + +++.+.|.+||++.
T Consensus 203 ~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 203 KIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 234456666999999999999999999998877 578999999999999987 4 56889999999874
No 19
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=7.9e-32 Score=227.44 Aligned_cols=273 Identities=16% Similarity=0.103 Sum_probs=168.6
Q ss_pred cceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC-------cc
Q 037354 36 AARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP-------RR 108 (346)
Q Consensus 36 ~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-------~~ 108 (346)
..++...+|.+++|..++++. ++++||++||++++...|..++..+.+. ||+|+++|+||||.|+... ..
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~--~~~~vll~HG~~~~~~~y~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 108 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPH--HDRVVVICPGRIESYVKYAELAYDLFHL-GYDVLIIDHRGQGRSGRLLDDPHRGHVE 108 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCC--CCcEEEEECCccchHHHHHHHHHHHHHC-CCeEEEEcCCCCCCCCCCCCCCCcCccc
Confidence 345566699999999998643 5679999999999988898888888766 9999999999999997532 13
Q ss_pred cHHHHHHHHHHHHHHc----CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhh
Q 037354 109 TVKSEAFDIVELADQL----QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLI 184 (346)
Q Consensus 109 ~~~~~~~~l~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (346)
+++++++|+.++++++ +. .+++++||||||.+++.++.++|++|+++|+++|......+ .+. . ......
T Consensus 109 ~~~~~~~d~~~~~~~~~~~~~~-~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~-~~~----~-~~~~~~ 181 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQPGPY-RKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLP-LPS----W-MARRIL 181 (330)
T ss_pred cHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCC-CCc----H-HHHHHH
Confidence 7899999999999876 55 68999999999999999999999999999999986432110 000 0 000000
Q ss_pred hhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCcccc---HHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCC
Q 037354 185 QWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRD---IEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGD 261 (346)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (346)
.+.......... .......+.... .......... ......+...+...............+. ...
T Consensus 182 ~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----- 249 (330)
T PRK10749 182 NWAEGHPRIRDG--YAIGTGRWRPLP----FAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESIL-AGE----- 249 (330)
T ss_pred HHHHHhcCCCCc--CCCCCCCCCCCC----cCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHH-HHH-----
Confidence 010000000000 000000010000 0000011001 1112222222111000000000111100 000
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc-------CCceEEEecCCCcceeec-c---chhHHHHH
Q 037354 262 WGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL-------SWIKYHEVRDGGHLILHY-N---GMCDYFLR 330 (346)
Q Consensus 262 ~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-------~~~~~~~i~~~gH~~~~e-~---~~~~~~i~ 330 (346)
.+...+.++++|+|+|+|++|.+++++.++.+.+.+ +++++++++|+||.++.| + +.+.+.|.
T Consensus 250 ------~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~ 323 (330)
T PRK10749 250 ------QVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIV 323 (330)
T ss_pred ------HHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHH
Confidence 011123445556999999999999999888887765 356899999999999987 4 56888899
Q ss_pred HHhhcc
Q 037354 331 ALLVGE 336 (346)
Q Consensus 331 ~fl~~~ 336 (346)
+||++.
T Consensus 324 ~fl~~~ 329 (330)
T PRK10749 324 DFFNRH 329 (330)
T ss_pred HHHhhc
Confidence 999764
No 20
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=9.3e-32 Score=229.73 Aligned_cols=272 Identities=15% Similarity=0.153 Sum_probs=160.9
Q ss_pred CCCceEEEEEcCCCC----CCCCeEEEEEcCCCCCCcccc--cchHHHH-------HhcCeEEEEECCCCCCCCCCCC--
Q 037354 42 SDGRYLAYREKGVSK----IESNYRIVLVHGFGSSKEMNF--PASQELI-------ESLGIYFVLYDRAGYGESDPNP-- 106 (346)
Q Consensus 42 ~~g~~l~~~~~g~~~----~~~~~~vl~lhG~~~~~~~~~--~~~~~l~-------~~~g~~vi~~D~~G~G~S~~~~-- 106 (346)
.+|.+++|...|++. .+.+|+|||+||++++...|. .+...|. .+ +|+||++|+||||.|+.+.
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~-~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDAS-KYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCccccc-CCEEEEeCCCCCCCCCCCCcC
Confidence 378999999998641 011689999999999988775 4444441 22 6999999999999998653
Q ss_pred ------cccHHHHHHHHHHHH-HHcCCCCeEE-EEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHH
Q 037354 107 ------RRTVKSEAFDIVELA-DQLQLGSKFY-VIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTD 178 (346)
Q Consensus 107 ------~~~~~~~~~~l~~~l-~~l~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 178 (346)
.++++++++++.+++ +++++ ++++ ++||||||.+|+.+|.++|++|+++|++++.... ... . ...
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi-~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~----~~~-~-~~~ 198 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGV-KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTE----MSG-R-NWM 198 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCC-CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCccc----ccH-H-HHH
Confidence 368999999988855 88998 6875 8999999999999999999999999999875311 000 0 000
Q ss_pred HhhhhhhhHHHHHhh-------chhhhHHHH-hhhcCCCcc-cccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHH
Q 037354 179 YRRRLIQWSLWIAKH-------IPGLLYWWI-SQKVVPSTS-VLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFY 249 (346)
Q Consensus 179 ~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (346)
+.............. .+....... ...++.... ................+......... .....+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 274 (360)
T PRK06489 199 WRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVT----ADANDFLY 274 (360)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhh----cCHHHHHH
Confidence 000000000000000 000000000 000000000 00000000000000111111100000 00000000
Q ss_pred HhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHH--HHHHHhcCCceEEEecCC----Ccceeec-c
Q 037354 250 ALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQ--RFISRKLSWIKYHEVRDG----GHLILHY-N 322 (346)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~--~~~~~~~~~~~~~~i~~~----gH~~~~e-~ 322 (346)
.+. .... .+....+.+|++|+|+|+|++|.++|++.. +.+++.+|++++++++++ ||+++ + |
T Consensus 275 ~~~-----~~~~-----~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P 343 (360)
T PRK06489 275 QWD-----SSRD-----YNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSA 343 (360)
T ss_pred HHH-----Hhhc-----cChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCH
Confidence 000 0000 012233556677799999999999998875 789999999999999996 99997 7 9
Q ss_pred chhHHHHHHHhhcc
Q 037354 323 GMCDYFLRALLVGE 336 (346)
Q Consensus 323 ~~~~~~i~~fl~~~ 336 (346)
++|++.|.+||++.
T Consensus 344 ~~~~~~i~~FL~~~ 357 (360)
T PRK06489 344 KFWKAYLAEFLAQV 357 (360)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999865
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.3e-31 Score=219.68 Aligned_cols=254 Identities=18% Similarity=0.208 Sum_probs=163.5
Q ss_pred EEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--cccHHHHHHHHHHHHHHc
Q 037354 47 LAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP--RRTVKSEAFDIVELADQL 124 (346)
Q Consensus 47 l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~l 124 (346)
++|...|++. .++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|.... .++++++++++.++++++
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGSYWAPQLDVLTQ--RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchhHHHHHHHHHHh--ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 4688888643 2578999999999999999988888775 6999999999999997543 469999999999999999
Q ss_pred CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhh
Q 037354 125 QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQ 204 (346)
Q Consensus 125 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (346)
+. ++++++||||||.+++.++.++|++|+++|++++.... ... ....+... ...+.......+.... .
T Consensus 78 ~~-~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~-----~~~-~~~~~~~~----~~~~~~~~~~~~~~~~-~ 145 (257)
T TIGR03611 78 NI-ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRP-----DPH-TRRCFDVR----IALLQHAGPEAYVHAQ-A 145 (257)
T ss_pred CC-CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCC-----Chh-HHHHHHHH----HHHHhccCcchhhhhh-h
Confidence 98 69999999999999999999999999999999985431 000 00000000 0000000000000000 0
Q ss_pred hcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEe
Q 037354 205 KVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQ 284 (346)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~ 284 (346)
.+............... .......... .. ......... .... .++...+.++++|+++++
T Consensus 146 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~------~~~~~~~~~-----~~~~-----~~~~~~~~~i~~P~l~i~ 205 (257)
T TIGR03611 146 LFLYPADWISENAARLA---ADEAHALAHF-PG------KANVLRRIN-----ALEA-----FDVSARLDRIQHPVLLIA 205 (257)
T ss_pred hhhccccHhhccchhhh---hhhhhccccc-Cc------cHHHHHHHH-----HHHc-----CCcHHHhcccCccEEEEe
Confidence 00000000000000000 0000000000 00 000000000 0000 012233455666799999
Q ss_pred cCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhc
Q 037354 285 GYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 285 G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
|++|.++|++..+.+.+.+++++++.++++||+++.+ |+++++.|.+||++
T Consensus 206 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 206 NRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred cCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999998 99999999999963
No 22
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=2e-31 Score=226.56 Aligned_cols=278 Identities=13% Similarity=0.043 Sum_probs=159.2
Q ss_pred CCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccch---HHHHHhcCeEEEEECCCCCCCCCCCC----cccHHH---
Q 037354 43 DGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPAS---QELIESLGIYFVLYDRAGYGESDPNP----RRTVKS--- 112 (346)
Q Consensus 43 ~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~---~~l~~~~g~~vi~~D~~G~G~S~~~~----~~~~~~--- 112 (346)
+|.+++|...|++.....|+||++||++++...|..++ ..|... +|+||++|+||||.|+.+. .+++++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPE-KYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcC-ceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 67899999999743224467777788887777775433 355433 6999999999999997543 234433
Q ss_pred --HHHHHHH----HHHHcCCCCe-EEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhh
Q 037354 113 --EAFDIVE----LADQLQLGSK-FYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQ 185 (346)
Q Consensus 113 --~~~~l~~----~l~~l~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (346)
+++|+.+ +++++++ ++ ++||||||||++|+.+|.+||++|+++|++++.... .. . ...+......
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi-~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~-----~~-~-~~~~~~~~~~ 174 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGI-ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKT-----TP-H-NFVFLEGLKA 174 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCC-CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCC-----CH-H-HHHHHHHHHH
Confidence 5666655 7788999 68 589999999999999999999999999999976421 10 0 0000000000
Q ss_pred hH----------------HHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHH
Q 037354 186 WS----------------LWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFY 249 (346)
Q Consensus 186 ~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (346)
.. ..+...........+...++.............................. .. ......
T Consensus 175 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~l~ 250 (339)
T PRK07581 175 ALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDP---NN-LLAMLW 250 (339)
T ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCc---cc-HHHHHH
Confidence 00 00000000000000111111100000000000000000111111110000 00 000000
Q ss_pred HhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecC-CCcceeec-cchhHH
Q 037354 250 ALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRD-GGHLILHY-NGMCDY 327 (346)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e-~~~~~~ 327 (346)
............+ ..++...+.++++|+|+|+|++|..+|++..+.+.+.+|+++++++++ +||+++.+ +++++.
T Consensus 251 ~~~~~~~~~~~~~---~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~ 327 (339)
T PRK07581 251 TWQRGDISRNPAY---GGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIA 327 (339)
T ss_pred HhhhcccccCccc---CCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHH
Confidence 0000000000000 012223455677779999999999999999999999999999999999 99999998 999999
Q ss_pred HHHHHhhcc
Q 037354 328 FLRALLVGE 336 (346)
Q Consensus 328 ~i~~fl~~~ 336 (346)
.|.+||++.
T Consensus 328 ~~~~~~~~~ 336 (339)
T PRK07581 328 FIDAALKEL 336 (339)
T ss_pred HHHHHHHHH
Confidence 999999874
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.98 E-value=2.5e-31 Score=216.99 Aligned_cols=248 Identities=17% Similarity=0.200 Sum_probs=164.1
Q ss_pred eEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC-cccHHHHHHHHHHHHHHc
Q 037354 46 YLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP-RRTVKSEAFDIVELADQL 124 (346)
Q Consensus 46 ~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~l 124 (346)
+++|...|+++ .+|+|||+||++.+...|..+++.|.. +|+|+++|+||||.|+... .++++++++++.++++.+
T Consensus 1 ~~~~~~~g~~~--~~~~li~~hg~~~~~~~~~~~~~~l~~--~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~ 76 (251)
T TIGR02427 1 RLHYRLDGAAD--GAPVLVFINSLGTDLRMWDPVLPALTP--DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL 76 (251)
T ss_pred CceEEeecCCC--CCCeEEEEcCcccchhhHHHHHHHhhc--ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 36788887653 568999999999999999998888864 7999999999999997654 469999999999999999
Q ss_pred CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhH-HHHHhhchhhhHHHHh
Q 037354 125 QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWS-LWIAKHIPGLLYWWIS 203 (346)
Q Consensus 125 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 203 (346)
+. ++++++||||||.+++.+|.++|++|+++|++++..... . ...+........ ..........+
T Consensus 77 ~~-~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~----- 142 (251)
T TIGR02427 77 GI-ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIG-----T---PESWNARIAAVRAEGLAALADAVL----- 142 (251)
T ss_pred CC-CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccC-----c---hhhHHHHHhhhhhccHHHHHHHHH-----
Confidence 98 699999999999999999999999999999998754211 0 001110000000 00000000000
Q ss_pred hhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEE
Q 037354 204 QKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIW 283 (346)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii 283 (346)
..++..... .......+.+........ ...+.... ... ...++...+.++++|++++
T Consensus 143 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~---------~~~~~~~~~~~~~~Pvlii 199 (251)
T TIGR02427 143 ERWFTPGFR------EAHPARLDLYRNMLVRQP-------PDGYAGCC-AAI---------RDADFRDRLGAIAVPTLCI 199 (251)
T ss_pred HHHcccccc------cCChHHHHHHHHHHHhcC-------HHHHHHHH-HHH---------hcccHHHHhhhcCCCeEEE
Confidence 011110000 000000011111100000 00000000 000 0011223344566779999
Q ss_pred ecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhh
Q 037354 284 QGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLV 334 (346)
Q Consensus 284 ~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 334 (346)
+|++|.++|.+..+.+.+.+++.++++++++||+++.+ |+++.+.|.+|++
T Consensus 200 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 200 AGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred EeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999 9999999999984
No 24
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.98 E-value=4.4e-31 Score=224.28 Aligned_cols=265 Identities=14% Similarity=0.058 Sum_probs=161.7
Q ss_pred ccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCc------------ccccchH---HHHHhcCeEEEEECCCCC
Q 037354 35 DAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKE------------MNFPASQ---ELIESLGIYFVLYDRAGY 99 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~------------~~~~~~~---~l~~~~g~~vi~~D~~G~ 99 (346)
......+ +|.+++|...|++ ++++||+||+.++.. .|..++. .|..+ +|+||++|+|||
T Consensus 37 ~~~~~~~-~~~~l~y~~~G~~----~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~-~~~Vi~~Dl~G~ 110 (343)
T PRK08775 37 SMRHAGL-EDLRLRYELIGPA----GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPA-RFRLLAFDFIGA 110 (343)
T ss_pred eecCCCC-CCceEEEEEeccC----CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCcc-ccEEEEEeCCCC
Confidence 4444455 8899999999863 335777766666655 6877775 46333 599999999999
Q ss_pred CCCCCCCcccHHHHHHHHHHHHHHcCCCCe-EEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHH
Q 037354 100 GESDPNPRRTVKSEAFDIVELADQLQLGSK-FYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTD 178 (346)
Q Consensus 100 G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 178 (346)
|.|.. ..++.+++++|+.++++++++ ++ ++++||||||++|+.+|.++|++|+++|++++.... .. ....
T Consensus 111 g~s~~-~~~~~~~~a~dl~~ll~~l~l-~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~-----~~--~~~~ 181 (343)
T PRK08775 111 DGSLD-VPIDTADQADAIALLLDALGI-ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRA-----HP--YAAA 181 (343)
T ss_pred CCCCC-CCCCHHHHHHHHHHHHHHcCC-CcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccC-----CH--HHHH
Confidence 98853 457889999999999999998 45 579999999999999999999999999999986421 11 0001
Q ss_pred HhhhhhhhHHHHHhh----ch--hhhHHH----------HhhhcCCCcccccCCCccCccccHHHHhh----hcCCCCcc
Q 037354 179 YRRRLIQWSLWIAKH----IP--GLLYWW----------ISQKVVPSTSVLERNPVYFSDRDIEVLKT----TKGFPMLT 238 (346)
Q Consensus 179 ~~~~~~~~~~~~~~~----~~--~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 238 (346)
+.... ......... .. ...... +...+...... ............+.. ....
T Consensus 182 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~---- 253 (343)
T PRK08775 182 WRALQ-RRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEV---INGRVRVAAEDYLDAAGAQYVAR---- 253 (343)
T ss_pred HHHHH-HHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccc---cCCCccchHHHHHHHHHHHHHHh----
Confidence 11000 000000000 00 000000 00000000000 000000000000000 0000
Q ss_pred hhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc-CCceEEEecC-CCc
Q 037354 239 QDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL-SWIKYHEVRD-GGH 316 (346)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~-~gH 316 (346)
.....+.. +.... ..+ ...+.++++|+|+|+|++|.++|++..+.+.+.+ |+++++++++ +||
T Consensus 254 ---~~~~~~~~-~~~~~----~~~-------~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH 318 (343)
T PRK08775 254 ---TPVNAYLR-LSESI----DLH-------RVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGH 318 (343)
T ss_pred ---cChhHHHH-HHHHH----hhc-------CCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccH
Confidence 00000000 00000 000 1124566677999999999999999888888877 7999999985 999
Q ss_pred ceeec-cchhHHHHHHHhhccc
Q 037354 317 LILHY-NGMCDYFLRALLVGEE 337 (346)
Q Consensus 317 ~~~~e-~~~~~~~i~~fl~~~~ 337 (346)
++++| |++|++.|.+||++..
T Consensus 319 ~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 319 DAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred HHHhcCHHHHHHHHHHHHHhcc
Confidence 99999 9999999999998754
No 25
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=5.3e-31 Score=218.30 Aligned_cols=280 Identities=20% Similarity=0.187 Sum_probs=169.7
Q ss_pred cceeecCCCc-eEEEEEcCCC------CCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--
Q 037354 36 AARIRLSDGR-YLAYREKGVS------KIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP-- 106 (346)
Q Consensus 36 ~~~~~~~~g~-~l~~~~~g~~------~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-- 106 (346)
...+....|. .+.....|.. ....+++||++|||+++...|+.++..|.+..|++|+++|++|+|.++..+
T Consensus 27 ~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~ 106 (326)
T KOG1454|consen 27 STSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRG 106 (326)
T ss_pred ceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCC
Confidence 3344554443 4555555443 113689999999999999999999999998878999999999999554332
Q ss_pred -cccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEec---ccCCCCCCCCCcchhhHHHhhh
Q 037354 107 -RRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIV---PTINYEWPSLPQSLIRTDYRRR 182 (346)
Q Consensus 107 -~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~---~~~~~~~~~~~~~~~~~~~~~~ 182 (346)
.|+..++++.+..++..... ++++++|||+||.+|+.+|+.+|+.|+++++++ +... ............
T Consensus 107 ~~y~~~~~v~~i~~~~~~~~~-~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~------~~~~~~~~~~~~ 179 (326)
T KOG1454|consen 107 PLYTLRELVELIRRFVKEVFV-EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVY------STPKGIKGLRRL 179 (326)
T ss_pred CceehhHHHHHHHHHHHhhcC-cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccc------cCCcchhHHHHh
Confidence 37999999999999999988 689999999999999999999999999999544 4321 111111111111
Q ss_pred hhhhHHHHHhhchhhhHHH---HhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhh-hh
Q 037354 183 LIQWSLWIAKHIPGLLYWW---ISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVV-AA 258 (346)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 258 (346)
............+...... +.............. .....+.......... .....++.. ..
T Consensus 180 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 244 (326)
T KOG1454|consen 180 LDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTD----PSRLLEKLLHLLSRPV-----------KEHFHRDARLSL 244 (326)
T ss_pred hhhhccHhhhcCccccccchhheeHhhhcceeeeccc----cccchhhhhhheeccc-----------ccchhhhheeeE
Confidence 1111111111110000000 000000000000000 0001111111111000 000000000 00
Q ss_pred cCCCCCCCCCCCCCCCCCC-CcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhcc
Q 037354 259 FGDWGFDPVRLSNPFPHNE-SSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGE 336 (346)
Q Consensus 259 ~~~~~~~~~~i~~p~~~i~-~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 336 (346)
.............-++++. ||+|+++|++|+++|.+.+..+.+.+|++++++++++||.++.| |+++++.|..|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 245 FLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred EEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 0000000011111233444 77999999999999999999999999999999999999999999 999999999999875
Q ss_pred c
Q 037354 337 E 337 (346)
Q Consensus 337 ~ 337 (346)
.
T Consensus 325 ~ 325 (326)
T KOG1454|consen 325 R 325 (326)
T ss_pred c
Confidence 3
No 26
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=4.3e-31 Score=225.05 Aligned_cols=119 Identities=18% Similarity=0.291 Sum_probs=98.3
Q ss_pred CCceEEEEEcCCCCCCCCeEEEEEcCCCCCCc-----------ccccch---HHHHHhcCeEEEEECCCC--CCCCCCC-
Q 037354 43 DGRYLAYREKGVSKIESNYRIVLVHGFGSSKE-----------MNFPAS---QELIESLGIYFVLYDRAG--YGESDPN- 105 (346)
Q Consensus 43 ~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~-----------~~~~~~---~~l~~~~g~~vi~~D~~G--~G~S~~~- 105 (346)
+|.+++|..+|+++...+++|||+||++++.. .|+.++ ..|..+ +|+||++|+|| ||.|.+.
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTD-RYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCC-ceEEEEecCCCCCCCCCCCCC
Confidence 78899999999743335689999999999763 466664 244344 79999999999 5655431
Q ss_pred ------------CcccHHHHHHHHHHHHHHcCCCCe-EEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 106 ------------PRRTVKSEAFDIVELADQLQLGSK-FYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 106 ------------~~~~~~~~~~~l~~~l~~l~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
..++++++++++.++++++++ ++ ++++||||||.+++.+|.++|++|+++|++++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI-EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 136899999999999999999 57 9999999999999999999999999999999864
No 27
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=3.1e-30 Score=201.15 Aligned_cols=268 Identities=18% Similarity=0.139 Sum_probs=190.2
Q ss_pred cccceeecCCCceEEEEEcCCCC-CCCCeEEEEEcCCCCCC-cccccchHHHHHhcCeEEEEECCCCCCCCCCCCcc--c
Q 037354 34 VDAARIRLSDGRYLAYREKGVSK-IESNYRIVLVHGFGSSK-EMNFPASQELIESLGIYFVLYDRAGYGESDPNPRR--T 109 (346)
Q Consensus 34 ~~~~~~~~~~g~~l~~~~~g~~~-~~~~~~vl~lhG~~~~~-~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~--~ 109 (346)
....+++..+|.++.+..|-+.. .+.+..|+++||++..+ ..|..++..|+.. ||.|+++|++|||.|+....+ +
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~-g~~v~a~D~~GhG~SdGl~~yi~~ 105 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKS-GFAVYAIDYEGHGRSDGLHAYVPS 105 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhC-CCeEEEeeccCCCcCCCCcccCCc
Confidence 45668888899999999997744 35678999999999886 5666788888877 999999999999999977766 9
Q ss_pred HHHHHHHHHHHHHHcC-----CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhh
Q 037354 110 VKSEAFDIVELADQLQ-----LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLI 184 (346)
Q Consensus 110 ~~~~~~~l~~~l~~l~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (346)
++..++|+.+..+... .+.+.+++||||||.+++.++.++|+..+++|+++|.+.......+.. ...
T Consensus 106 ~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p-~v~------- 177 (313)
T KOG1455|consen 106 FDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHP-PVI------- 177 (313)
T ss_pred HHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCc-HHH-------
Confidence 9999999998887642 235899999999999999999999999999999999875321111111 000
Q ss_pred hhHHHHHhhchhhhHHHHhhhcCCCcccccCC-CccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCC
Q 037354 185 QWSLWIAKHIPGLLYWWISQKVVPSTSVLERN-PVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWG 263 (346)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (346)
.....+....| ........ .......+.+.......++.............+.++...
T Consensus 178 ~~l~~l~~liP-------------~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~-------- 236 (313)
T KOG1455|consen 178 SILTLLSKLIP-------------TWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTA-------- 236 (313)
T ss_pred HHHHHHHHhCC-------------ceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHH--------
Confidence 11111121211 11111111 112223455555556666665544444444444443222
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc--CCceEEEecCCCcceee-c----cchhHHHHHHHhhc
Q 037354 264 FDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL--SWIKYHEVRDGGHLILH-Y----NGMCDYFLRALLVG 335 (346)
Q Consensus 264 ~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~-e----~~~~~~~i~~fl~~ 335 (346)
++...++++++|.+++||+.|.++.++.++.+.+.. .+.++.+|||.-|.++. | .+.+...|.+||++
T Consensus 237 ----~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 237 ----DLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred ----HHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 233445566777999999999999999999999987 46899999999999996 4 45678888899875
No 28
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=6.6e-30 Score=209.86 Aligned_cols=274 Identities=20% Similarity=0.183 Sum_probs=185.7
Q ss_pred ccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCC-CCCc--ccHH
Q 037354 35 DAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESD-PNPR--RTVK 111 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~-~~~~--~~~~ 111 (346)
...++...+|..++|..+-.+. ....+||++||++.+..-|..++..|... ||.|+++|+||||.|. .... .++.
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~-~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~-G~~V~~~D~RGhG~S~r~~rg~~~~f~ 87 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPE-PPKGVVVLVHGLGEHSGRYEELADDLAAR-GFDVYALDLRGHGRSPRGQRGHVDSFA 87 (298)
T ss_pred ccceeecCCCceEEEEeecCCC-CCCcEEEEecCchHHHHHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCcCCchhHH
Confidence 5566777799999999997654 12379999999999999999999999987 9999999999999997 3333 2799
Q ss_pred HHHHHHHHHHHHcC---CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHH
Q 037354 112 SEAFDIVELADQLQ---LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSL 188 (346)
Q Consensus 112 ~~~~~l~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (346)
++.+|+.++++... .+.+++++||||||.+++.++.+++.+|+++||.+|...... ........... ..
T Consensus 88 ~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~-----~~~~~~~~~~~---~~ 159 (298)
T COG2267 88 DYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG-----AILRLILARLA---LK 159 (298)
T ss_pred HHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh-----hHHHHHHHHHh---cc
Confidence 99999999998874 346999999999999999999999999999999999854211 00000000000 00
Q ss_pred HHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCC
Q 037354 189 WIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVR 268 (346)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (346)
...+..+.+. +.. .............+.+..+.+..++...........+...+. ... ..
T Consensus 160 ~~~~~~p~~~--------~~~-~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~-a~~----------~~ 219 (298)
T COG2267 160 LLGRIRPKLP--------VDS-NLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALL-AGR----------VP 219 (298)
T ss_pred cccccccccc--------cCc-ccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHH-hhc----------cc
Confidence 0011111000 000 000012222334566677777776653222222211111111 110 01
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCc-hhHHHHHHHhc--CCceEEEecCCCcceeec--c--chhHHHHHHHhhcccc
Q 037354 269 LSNPFPHNESSVHIWQGYEDKVVP-FQLQRFISRKL--SWIKYHEVRDGGHLILHY--N--GMCDYFLRALLVGEES 338 (346)
Q Consensus 269 i~~p~~~i~~Pvlii~G~~D~~~~-~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e--~--~~~~~~i~~fl~~~~~ 338 (346)
...+...+++|+|+++|++|.+++ .+...++.+.. +++++++++|+.|.++.| . +++.+.+.+|+.+..+
T Consensus 220 ~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 220 ALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred chhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 222344566779999999999999 67777666665 678999999999999998 5 7899999999987643
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=2.2e-30 Score=210.77 Aligned_cols=240 Identities=16% Similarity=0.161 Sum_probs=150.8
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccCh
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGS 139 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg 139 (346)
.|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+....++++++++++.+.+ . ++++++||||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~----~-~~~~lvG~S~Gg 76 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA--HFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA----P-DPAIWLGWSLGG 76 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc--CeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC----C-CCeEEEEEcHHH
Confidence 47999999999999999999998875 5999999999999998766678888888776543 2 589999999999
Q ss_pred HHHHHhHhhccCceeeeEEecccCCCCCC-CCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCc
Q 037354 140 YPTWSCLKYIPHRLAGVALIVPTINYEWP-SLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPV 218 (346)
Q Consensus 140 ~~a~~~a~~~p~~v~~lil~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (346)
.+++.++.++|++|+++|++++.+.+... .+............ ..............+.....+.. .
T Consensus 77 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--------~ 144 (245)
T TIGR01738 77 LVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGF----QQQLSDDYQRTIERFLALQTLGT--------P 144 (245)
T ss_pred HHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHH----HHHhhhhHHHHHHHHHHHHHhcC--------C
Confidence 99999999999999999999987543111 01101000001000 00000000000000000000000 0
Q ss_pred cCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHH
Q 037354 219 YFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRF 298 (346)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~ 298 (346)
........+................. ....+. ..+....+.++++|+++++|++|.++|.+..+.
T Consensus 145 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~ 209 (245)
T TIGR01738 145 -TARQDARALKQTLLARPTPNVQVLQA-GLEILA-------------TVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPY 209 (245)
T ss_pred -ccchHHHHHHHHhhccCCCCHHHHHH-HHHHhh-------------cccHHHHHhcCCCCEEEEeecCCcccCHHHHHH
Confidence 00001111111111000000000000 000000 001222344566679999999999999999999
Q ss_pred HHHhcCCceEEEecCCCcceeec-cchhHHHHHHHh
Q 037354 299 ISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALL 333 (346)
Q Consensus 299 ~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl 333 (346)
+.+.++++++++++++||++++| |+++++.|.+|+
T Consensus 210 ~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 210 LDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred HHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 99999999999999999999999 999999999996
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=3.2e-30 Score=209.35 Aligned_cols=236 Identities=15% Similarity=0.126 Sum_probs=146.8
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccCh
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGS 139 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg 139 (346)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|+.+...+++++++|+.+++++++. ++++++||||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvG~S~Gg 77 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P--DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNI-LPYWLVGYSLGG 77 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C--CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCC-CCeEEEEECHHH
Confidence 578999999999999999999887 3 589999999999999877667999999999999999998 799999999999
Q ss_pred HHHHHhHhhccCc-eeeeEEecccCCCCCCCCCcchhh-HHHhhhhhhhHHHHHhh-chhhhHHHHhhhcCCCcccccCC
Q 037354 140 YPTWSCLKYIPHR-LAGVALIVPTINYEWPSLPQSLIR-TDYRRRLIQWSLWIAKH-IPGLLYWWISQKVVPSTSVLERN 216 (346)
Q Consensus 140 ~~a~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 216 (346)
.+++.+|.++|++ |++++++++... ....... ..+.. ...+....... ....+..++....+.
T Consensus 78 ~va~~~a~~~~~~~v~~lvl~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 143 (242)
T PRK11126 78 RIAMYYACQGLAGGLCGLIVEGGNPG-----LQNAEERQARWQN-DRQWAQRFRQEPLEQVLADWYQQPVFA-------- 143 (242)
T ss_pred HHHHHHHHhCCcccccEEEEeCCCCC-----CCCHHHHHHHHhh-hHHHHHHhccCcHHHHHHHHHhcchhh--------
Confidence 9999999999764 999999987532 1111100 00000 00111100000 000111000000000
Q ss_pred CccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHH
Q 037354 217 PVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQ 296 (346)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~ 296 (346)
.+.............. . . .......+. ..... ...++...+.++++|+++++|++|..+.
T Consensus 144 --~~~~~~~~~~~~~~~~--~-~----~~~~~~~~~-~~~~~------~~~~~~~~l~~i~~P~lii~G~~D~~~~---- 203 (242)
T PRK11126 144 --SLNAEQRQQLVAKRSN--N-N----GAAVAAMLE-ATSLA------KQPDLRPALQALTFPFYYLCGERDSKFQ---- 203 (242)
T ss_pred --ccCccHHHHHHHhccc--C-C----HHHHHHHHH-hcCcc------cCCcHHHHhhccCCCeEEEEeCCcchHH----
Confidence 0111111111110000 0 0 000000000 00000 0011223455667779999999998653
Q ss_pred HHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhc
Q 037354 297 RFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 297 ~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
.+.+. .++++++++++||+++.| |+++++.|.+|++.
T Consensus 204 -~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 204 -ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred -HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 22333 378999999999999999 99999999999975
No 31
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=5.8e-30 Score=219.56 Aligned_cols=274 Identities=15% Similarity=0.089 Sum_probs=161.6
Q ss_pred CCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcc-------------cccchH---HHHHhcCeEEEEECCCCC-CCCCCC
Q 037354 43 DGRYLAYREKGVSKIESNYRIVLVHGFGSSKEM-------------NFPASQ---ELIESLGIYFVLYDRAGY-GESDPN 105 (346)
Q Consensus 43 ~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~-------------~~~~~~---~l~~~~g~~vi~~D~~G~-G~S~~~ 105 (346)
+|.+++|..+|.++...+|+|||+||++++... |..++. .+... +|+||++|++|+ |.|+.+
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTD-RYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCcc-ceEEEeccCCCCCCCCCCC
Confidence 567789999997543347899999999999875 554442 33223 799999999983 544321
Q ss_pred ---------------CcccHHHHHHHHHHHHHHcCCCCe-EEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCC
Q 037354 106 ---------------PRRTVKSEAFDIVELADQLQLGSK-FYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPS 169 (346)
Q Consensus 106 ---------------~~~~~~~~~~~l~~~l~~l~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~ 169 (346)
+.++++++++++.++++++++ ++ ++++||||||.+++.+|.++|++|+++|++++....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~---- 184 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGI-TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL---- 184 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC-CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc----
Confidence 146899999999999999999 57 599999999999999999999999999999986432
Q ss_pred CCcchhhHHHhhhhhhhHH---------------------HHHhhch--hhhHHHHhhhcCCCcccccCC-CccCccccH
Q 037354 170 LPQSLIRTDYRRRLIQWSL---------------------WIAKHIP--GLLYWWISQKVVPSTSVLERN-PVYFSDRDI 225 (346)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 225 (346)
... ...+......... ....... ...........+......... .........
T Consensus 185 -~~~--~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~ 261 (379)
T PRK00175 185 -SAQ--NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQV 261 (379)
T ss_pred -CHH--HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchH
Confidence 110 0001000000000 0000000 000000000111100000000 000000000
Q ss_pred -HHHh----hhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCC---CCCCCCCCCCCCcEEEEecCCCCCCchhHHH
Q 037354 226 -EVLK----TTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDP---VRLSNPFPHNESSVHIWQGYEDKVVPFQLQR 297 (346)
Q Consensus 226 -~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~ 297 (346)
..+. .+..... ...+. .... ....++... .++...+.+|++|+|+|+|++|.++|++..+
T Consensus 262 ~~~l~~~~~~~~~~~d-------~~~~~-~~~~----~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~ 329 (379)
T PRK00175 262 ESYLRYQGDKFVERFD-------ANSYL-YLTR----ALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSR 329 (379)
T ss_pred HHHHHHHHHHHhhccC-------chHHH-HHHH----HHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHH
Confidence 0000 0000000 00000 0000 000000000 1123345566777999999999999999999
Q ss_pred HHHHhcCCc----eEEEec-CCCcceeec-cchhHHHHHHHhhccc
Q 037354 298 FISRKLSWI----KYHEVR-DGGHLILHY-NGMCDYFLRALLVGEE 337 (346)
Q Consensus 298 ~~~~~~~~~----~~~~i~-~~gH~~~~e-~~~~~~~i~~fl~~~~ 337 (346)
.+++.++++ ++++++ ++||++++| |+++++.|.+||++..
T Consensus 330 ~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 330 EIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred HHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 999999887 778775 899999999 9999999999998754
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=7.9e-30 Score=212.59 Aligned_cols=268 Identities=17% Similarity=0.203 Sum_probs=160.0
Q ss_pred eeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--c--ccHHHH
Q 037354 38 RIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP--R--RTVKSE 113 (346)
Q Consensus 38 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~--~~~~~~ 113 (346)
.++. +|.++.|...+.+. .+++|||+||++++...|......+..+.||+|+++|+||||.|..+. . ++++++
T Consensus 6 ~~~~-~~~~~~~~~~~~~~--~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (288)
T TIGR01250 6 IITV-DGGYHLFTKTGGEG--EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYF 82 (288)
T ss_pred eecC-CCCeEEEEeccCCC--CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHH
Confidence 3444 67788898887542 468999999987666555444444444448999999999999998643 2 689999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhh
Q 037354 114 AFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKH 193 (346)
Q Consensus 114 ~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
++++.+++++++. ++++++||||||.+++.++..+|++|+++|++++.... +.. . .........
T Consensus 83 ~~~~~~~~~~~~~-~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-----~~~-~-~~~~~~~~~-------- 146 (288)
T TIGR01250 83 VDELEEVREKLGL-DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSA-----PEY-V-KELNRLRKE-------- 146 (288)
T ss_pred HHHHHHHHHHcCC-CcEEEEEeehHHHHHHHHHHhCccccceeeEecccccc-----hHH-H-HHHHHHHhh--------
Confidence 9999999999998 68999999999999999999999999999999875321 100 0 000000000
Q ss_pred chhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhc-----CCCCcch-hhhh----hhhHHHHhhhhhhhhcCCCC
Q 037354 194 IPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTK-----GFPMLTQ-DKLQ----DRSVFYALRGDVVAAFGDWG 263 (346)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~ 263 (346)
.+........ ...... .............+. ....... .... .......+.... .......
T Consensus 147 ~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 217 (288)
T TIGR01250 147 LPPEVRAAIK-RCEASG-------DYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPN-EFTITGN 217 (288)
T ss_pred cChhHHHHHH-HHHhcc-------CcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCc-ccccccc
Confidence 0000000000 000000 000000000000000 0000000 0000 000000000000 0000000
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhh
Q 037354 264 FDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLV 334 (346)
Q Consensus 264 ~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 334 (346)
....++...+.++++|+++++|++|.+ +++..+.+.+.++++++++++++||+++.| |+++.+.|.+||+
T Consensus 218 ~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 218 LKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred ccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 000122234556777899999999985 567788889989999999999999999999 9999999999985
No 33
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=2.9e-29 Score=213.97 Aligned_cols=263 Identities=14% Similarity=0.120 Sum_probs=169.1
Q ss_pred cceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc--ccHHHH
Q 037354 36 AARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR--RTVKSE 113 (346)
Q Consensus 36 ~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~ 113 (346)
...+...+|..++|..+.+...+.+++|||+||++++...|..++..|.++ ||+|+++|+||||.|+.... .+++.+
T Consensus 112 ~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~ 190 (395)
T PLN02652 112 TSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSC-GFGVYAMDWIGHGGSDGLHGYVPSLDYV 190 (395)
T ss_pred EEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCcCHHHH
Confidence 345566678899999988754456789999999999988899999999876 99999999999999987543 378889
Q ss_pred HHHHHHHHHHcCC---CCeEEEEEEccChHHHHHhHhhccC---ceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhH
Q 037354 114 AFDIVELADQLQL---GSKFYVIGVSIGSYPTWSCLKYIPH---RLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWS 187 (346)
Q Consensus 114 ~~~l~~~l~~l~~---~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (346)
++|+.++++.+.. +.+++++||||||.+++.++. +|+ +|+++|+.+|.... .... .+.......
T Consensus 191 ~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~-----~~~~---~~~~~~~~l- 260 (395)
T PLN02652 191 VEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRV-----KPAH---PIVGAVAPI- 260 (395)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccccc-----ccch---HHHHHHHHH-
Confidence 9999999988752 137999999999999998765 564 89999999986431 1000 000000000
Q ss_pred HHHHhhchhhhHHHHhhhcCCCcccccCCCc--cCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCC
Q 037354 188 LWIAKHIPGLLYWWISQKVVPSTSVLERNPV--YFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFD 265 (346)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (346)
+.. ..+.......... ... .+..........+............. .+.....
T Consensus 261 ----------~~~-----~~p~~~~~~~~~~~~~~s-~~~~~~~~~~~dp~~~~g~i~~~~~~-~~~~~~~--------- 314 (395)
T PLN02652 261 ----------FSL-----VAPRFQFKGANKRGIPVS-RDPAALLAKYSDPLVYTGPIRVRTGH-EILRISS--------- 314 (395)
T ss_pred ----------HHH-----hCCCCcccCcccccCCcC-CCHHHHHHHhcCCCcccCCchHHHHH-HHHHHHH---------
Confidence 000 0110000000000 011 11112212222211111000000000 0000000
Q ss_pred CCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcC--CceEEEecCCCcceeec--cchhHHHHHHHhhccc
Q 037354 266 PVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLS--WIKYHEVRDGGHLILHY--NGMCDYFLRALLVGEE 337 (346)
Q Consensus 266 ~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~~~~ 337 (346)
.+...+.++++|+|+++|++|.++|++.++.+.+.++ +.+++++++++|.++.| ++++.+.|.+||++.-
T Consensus 315 --~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 315 --YLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred --HHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 0112344556669999999999999999999988764 47899999999999886 8999999999998653
No 34
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=8e-30 Score=213.36 Aligned_cols=124 Identities=23% Similarity=0.310 Sum_probs=103.3
Q ss_pred cccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC---cccH
Q 037354 34 VDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP---RRTV 110 (346)
Q Consensus 34 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~ 110 (346)
..+.++...+|.+++|...|++ ++++|||+||++++...+ .+...+... +|+|+++|+||||.|+.+. .++.
T Consensus 4 ~~~~~~~~~~~~~l~y~~~g~~---~~~~lvllHG~~~~~~~~-~~~~~~~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~ 78 (306)
T TIGR01249 4 FVSGYLNVSDNHQLYYEQSGNP---DGKPVVFLHGGPGSGTDP-GCRRFFDPE-TYRIVLFDQRGCGKSTPHACLEENTT 78 (306)
T ss_pred ccCCeEEcCCCcEEEEEECcCC---CCCEEEEECCCCCCCCCH-HHHhccCcc-CCEEEEECCCCCCCCCCCCCcccCCH
Confidence 3567888888999999998865 367899999988776543 233333333 7999999999999998653 2478
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 111 KSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 111 ~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
+++++|+..+++++++ ++++++||||||.+++.++.++|++|+++|++++..
T Consensus 79 ~~~~~dl~~l~~~l~~-~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 79 WDLVADIEKLREKLGI-KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 8999999999999998 699999999999999999999999999999999864
No 35
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=3e-29 Score=205.55 Aligned_cols=261 Identities=12% Similarity=0.055 Sum_probs=161.5
Q ss_pred CCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--cccHHHHHHHHHHH
Q 037354 43 DGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP--RRTVKSEAFDIVEL 120 (346)
Q Consensus 43 ~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~ 120 (346)
+|.+++|..-. +++|+|||+||++.+...|..+...|.+. ||+|+++|+||||.|.... .++++++++++.++
T Consensus 5 ~~~~~~~~~~~----~~~p~vvliHG~~~~~~~w~~~~~~L~~~-g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~ 79 (273)
T PLN02211 5 NGEEVTDMKPN----RQPPHFVLIHGISGGSWCWYKIRCLMENS-GYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDF 79 (273)
T ss_pred ccccccccccc----CCCCeEEEECCCCCCcCcHHHHHHHHHhC-CCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHH
Confidence 67888887721 25789999999999999999998888765 8999999999999886433 26999999999999
Q ss_pred HHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHH
Q 037354 121 ADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYW 200 (346)
Q Consensus 121 l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (346)
+++++..++++++||||||.+++.++..+|++|+++|++++.... .++... ..+....... .........
T Consensus 80 i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~--~g~~~~---~~~~~~~~~~-~~~~~~~~~---- 149 (273)
T PLN02211 80 LSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK--LGFQTD---EDMKDGVPDL-SEFGDVYEL---- 149 (273)
T ss_pred HHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC--CCCCHH---HHHhccccch-hhhccceee----
Confidence 999853269999999999999999999999999999999875320 001000 0000000000 000000000
Q ss_pred HHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCC-CCc
Q 037354 201 WISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHN-ESS 279 (346)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i-~~P 279 (346)
.+... ............+....+...... ...................... .......++ ++|
T Consensus 150 ----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~vP 213 (273)
T PLN02211 150 ----GFGLG----PDQPPTSAIIKKEFRRKILYQMSP---QEDSTLAAMLLRPGPILALRSA-----RFEEETGDIDKVP 213 (273)
T ss_pred ----eeccC----CCCCCceeeeCHHHHHHHHhcCCC---HHHHHHHHHhcCCcCccccccc-----cccccccccCccc
Confidence 00000 000000000001111111100000 0000000000000000011000 111112233 567
Q ss_pred EEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhc
Q 037354 280 VHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 280 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
+++|.|++|..+|++.++.+.+.++.++++.++ +||.++++ |+++++.|.++...
T Consensus 214 ~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 214 RVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred eEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 89999999 99999999988654
No 36
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=6.2e-30 Score=203.22 Aligned_cols=281 Identities=14% Similarity=0.126 Sum_probs=168.8
Q ss_pred CccccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc----
Q 037354 32 GLVDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR---- 107 (346)
Q Consensus 32 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~---- 107 (346)
.+....++.+.++..+........+ +.++++||+||+|++...|..-++.|++. ..|+++|++|+|+|+++.-
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~~~~-~~~~plVliHGyGAg~g~f~~Nf~~La~~--~~vyaiDllG~G~SSRP~F~~d~ 139 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVSNES-ANKTPLVLIHGYGAGLGLFFRNFDDLAKI--RNVYAIDLLGFGRSSRPKFSIDP 139 (365)
T ss_pred CCcceeeeecCCCceeEEEeecccc-cCCCcEEEEeccchhHHHHHHhhhhhhhc--CceEEecccCCCCCCCCCCCCCc
Confidence 3445566777666666666554432 47899999999999999999889999984 6799999999999997651
Q ss_pred -ccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCc--chhhHHHhhhhh
Q 037354 108 -RTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQ--SLIRTDYRRRLI 184 (346)
Q Consensus 108 -~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~--~~~~~~~~~~~~ 184 (346)
.....+++-|+++....++ .+.+|+||||||.+|..||.+||++|++|||++|..-...+.... ......|.....
T Consensus 140 ~~~e~~fvesiE~WR~~~~L-~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~ 218 (365)
T KOG4409|consen 140 TTAEKEFVESIEQWRKKMGL-EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALF 218 (365)
T ss_pred ccchHHHHHHHHHHHHHcCC-cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhh
Confidence 2566899999999999999 699999999999999999999999999999999986322110000 001111111110
Q ss_pred ---------hhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhh
Q 037354 185 ---------QWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDV 255 (346)
Q Consensus 185 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (346)
.....+....+.+...+....+.... ... +.+.+.++....... ....+.....+..
T Consensus 219 ~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~-------~~~---~ed~l~~YiY~~n~~--~psgE~~fk~l~~-- 284 (365)
T KOG4409|consen 219 LVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFP-------SLI---EEDFLHEYIYHCNAQ--NPSGETAFKNLFE-- 284 (365)
T ss_pred hhhhcCCHHHHHHhccccchHHHhhhhHHHHHhcc-------ccc---hhHHHHHHHHHhcCC--CCcHHHHHHHHHh--
Confidence 11111112222222222221111110 000 111111111100000 0001111111110
Q ss_pred hhhcCCCCCCCCCCCCCCCCC--CCcEEEEecCCCCCCchhHHHHHHHh--cCCceEEEecCCCcceeec-cchhHHHHH
Q 037354 256 VAAFGDWGFDPVRLSNPFPHN--ESSVHIWQGYEDKVVPFQLQRFISRK--LSWIKYHEVRDGGHLILHY-NGMCDYFLR 330 (346)
Q Consensus 256 ~~~~~~~~~~~~~i~~p~~~i--~~Pvlii~G~~D~~~~~~~~~~~~~~--~~~~~~~~i~~~gH~~~~e-~~~~~~~i~ 330 (346)
...+....+...+..+ +||+++|+|++|-+- .....++.+. ...++.++++++||.++.+ |+.|++.+.
T Consensus 285 -----~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~ 358 (365)
T KOG4409|consen 285 -----PGGWARRPMIQRLRELKKDVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVL 358 (365)
T ss_pred -----ccchhhhhHHHHHHhhccCCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHH
Confidence 0000011111111112 356999999999654 3444444443 2458999999999999999 999999999
Q ss_pred HHhhcc
Q 037354 331 ALLVGE 336 (346)
Q Consensus 331 ~fl~~~ 336 (346)
.+++..
T Consensus 359 ~~~~~~ 364 (365)
T KOG4409|consen 359 EECDKV 364 (365)
T ss_pred HHHhcc
Confidence 998753
No 37
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=8.2e-29 Score=199.04 Aligned_cols=221 Identities=21% Similarity=0.335 Sum_probs=145.1
Q ss_pred EEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC---cccHHHHHHHHHHHHHHcCCCCeEEEEEEccCh
Q 037354 63 IVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP---RRTVKSEAFDIVELADQLQLGSKFYVIGVSIGS 139 (346)
Q Consensus 63 vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg 139 (346)
|||+||++++...|..+++.|. + ||+|+++|+||+|.|+... .++++++++|+.+++++++. ++++++|||+||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvG~S~Gg 77 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-R-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI-KKVILVGHSMGG 77 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-T-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT-SSEEEEEETHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-C-CCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc-cccccccccccc
Confidence 7999999999999999999995 4 8999999999999998765 46899999999999999998 699999999999
Q ss_pred HHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhh--HHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCC
Q 037354 140 YPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIR--TDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNP 217 (346)
Q Consensus 140 ~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (346)
.+++.++.++|++|+++|++++.... .... .........................+.. +...
T Consensus 78 ~~a~~~a~~~p~~v~~~vl~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------- 141 (228)
T PF12697_consen 78 MIALRLAARYPDRVKGLVLLSPPPPL-------PDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYR-WFDG-------- 141 (228)
T ss_dssp HHHHHHHHHSGGGEEEEEEESESSSH-------HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTH--------
T ss_pred ccccccccccccccccceeecccccc-------cccccccccchhhhhhhhcccccccccccccccc-cccc--------
Confidence 99999999999999999999997521 0000 0000111111100000000000000000 0000
Q ss_pred ccCccccHHHHhhhcCCCCcchhhhhhhhHHH-HhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHH
Q 037354 218 VYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFY-ALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQ 296 (346)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~ 296 (346)
....+.... ........... ....+. ...++++++|+++++|++|.+++.+..
T Consensus 142 ----~~~~~~~~~--------~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~pvl~i~g~~D~~~~~~~~ 195 (228)
T PF12697_consen 142 ----DEPEDLIRS--------SRRALAEYLRSNLWQADL--------------SEALPRIKVPVLVIHGEDDPIVPPESA 195 (228)
T ss_dssp ----HHHHHHHHH--------HHHHHHHHHHHHHHHHHH--------------HHHHHGSSSEEEEEEETTSSSSHHHHH
T ss_pred ----ccccccccc--------cccccccccccccccccc--------------cccccccCCCeEEeecCCCCCCCHHHH
Confidence 000011100 00000000000 001111 111222344599999999999999999
Q ss_pred HHHHHhcCCceEEEecCCCcceeec-cchhHHH
Q 037354 297 RFISRKLSWIKYHEVRDGGHLILHY-NGMCDYF 328 (346)
Q Consensus 297 ~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~ 328 (346)
+.+.+.++++++++++++||+++.| |+++++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 196 EELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred HHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 9999999999999999999999998 9988763
No 38
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=2.4e-28 Score=199.25 Aligned_cols=245 Identities=19% Similarity=0.190 Sum_probs=153.1
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC---cccHHHHHHH-HHHHHHHcCCCCeEEEEEE
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP---RRTVKSEAFD-IVELADQLQLGSKFYVIGV 135 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~~-l~~~l~~l~~~~~~~lvGh 135 (346)
+|+|||+||++++...|..+...|. + ||+|+++|+||||.|+.+. ..++++.+++ +.++++.++. ++++++||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~ 77 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-P-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGI-EPFFLVGY 77 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-c-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCC-CeEEEEEe
Confidence 3689999999999999999999998 4 7999999999999998644 3588999999 7888888887 69999999
Q ss_pred ccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhh-chhhhHHHHhhhcCCCccccc
Q 037354 136 SIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKH-IPGLLYWWISQKVVPSTSVLE 214 (346)
Q Consensus 136 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 214 (346)
|+||.+++.+|.++|++|++++++++.... ...............+...+... .......+.....+..
T Consensus 78 S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 147 (251)
T TIGR03695 78 SMGGRIALYYALQYPERVQGLILESGSPGL-----ATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFAS----- 147 (251)
T ss_pred ccHHHHHHHHHHhCchheeeeEEecCCCCc-----CchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeee-----
Confidence 999999999999999999999999986432 11110000000000011111100 0011111110000000
Q ss_pred CCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchh
Q 037354 215 RNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQ 294 (346)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~ 294 (346)
...........+........ .......+....... ...+...+.++++|+++++|++|..++ +
T Consensus 148 --~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~-~ 210 (251)
T TIGR03695 148 --QKNLPPEQRQALRAKRLANN-------PEGLAKMLRATGLGK-------QPSLWPKLQALTIPVLYLCGEKDEKFV-Q 210 (251)
T ss_pred --cccCChHHhHHHHHhccccc-------chHHHHHHHHhhhhc-------ccchHHHhhCCCCceEEEeeCcchHHH-H
Confidence 00011111111111100000 000111110000000 001112244567779999999998774 5
Q ss_pred HHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhh
Q 037354 295 LQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLV 334 (346)
Q Consensus 295 ~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 334 (346)
..+.+.+..+++++++++++||+++++ |+++++.|.+||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 211 IAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred HHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 667788888999999999999999999 9999999999984
No 39
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=2.5e-27 Score=203.97 Aligned_cols=267 Identities=14% Similarity=0.134 Sum_probs=154.1
Q ss_pred eEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc-c-c----HHHHHHHHHH
Q 037354 46 YLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR-R-T----VKSEAFDIVE 119 (346)
Q Consensus 46 ~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-~-~----~~~~~~~l~~ 119 (346)
++.+..+... .++|+|||+||++++...|...+..|.+ +|+|+++|+||||.|+.+.. . + .+.+++++.+
T Consensus 93 ~~~~~~~~~~--~~~p~vvllHG~~~~~~~~~~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~ 168 (402)
T PLN02894 93 FINTVTFDSK--EDAPTLVMVHGYGASQGFFFRNFDALAS--RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEE 168 (402)
T ss_pred eEEEEEecCC--CCCCEEEEECCCCcchhHHHHHHHHHHh--CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHH
Confidence 5666555432 2678999999999998889888888876 59999999999999986532 1 1 2246778888
Q ss_pred HHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHH------hh
Q 037354 120 LADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIA------KH 193 (346)
Q Consensus 120 ~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 193 (346)
+++.+++ ++++++||||||.+++.+|.++|++|+++|++++........ . ....+......+...+. ..
T Consensus 169 ~~~~l~~-~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (402)
T PLN02894 169 WRKAKNL-SNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESD---D-KSEWLTKFRATWKGAVLNHLWESNF 243 (402)
T ss_pred HHHHcCC-CCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcc---h-hHHHHhhcchhHHHHHHHHHhhcCC
Confidence 8898998 699999999999999999999999999999999864321110 0 00000000000000000 00
Q ss_pred ------------chhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCC
Q 037354 194 ------------IPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGD 261 (346)
Q Consensus 194 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (346)
.+.+........+.... ....+.....+.+..+........ .........+.. ...
T Consensus 244 ~p~~~~~~~gp~~~~l~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~ 311 (402)
T PLN02894 244 TPQKIIRGLGPWGPNLVRRYTTARFGAHS-----TGDILSEEESKLLTDYVYHTLAAK--ASGELCLKYIFS-----FGA 311 (402)
T ss_pred CHHHHHHhccchhHHHHHHHHHHHhhhcc-----cccccCcchhhHHHHHHHHhhcCC--CchHHHHHHhcc-----Cch
Confidence 00011100001000000 000011111111111110000000 000000000000 000
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc-CCceEEEecCCCcceeec-cchhHHHHHHHhhcc
Q 037354 262 WGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL-SWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGE 336 (346)
Q Consensus 262 ~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 336 (346)
+ ...++...+.++++|+++|+|++|.+.+ .....+.+.. +.+++++++++||+++.| |++|++.|.+|++..
T Consensus 312 ~--~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 312 F--ARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKY 385 (402)
T ss_pred h--hcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHh
Confidence 0 0112223355667779999999998776 4454555554 468999999999999999 999999999888764
No 40
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=5e-28 Score=209.01 Aligned_cols=257 Identities=19% Similarity=0.243 Sum_probs=162.9
Q ss_pred ceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCC-CcccHHHHHH
Q 037354 37 ARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPN-PRRTVKSEAF 115 (346)
Q Consensus 37 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~ 115 (346)
.++.. ++.+++|...|++ ++++|||+||++++...|..+...|.+ +|+|+++|+||||.|... ...+++++++
T Consensus 112 ~~~~~-~~~~i~~~~~g~~---~~~~vl~~HG~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 185 (371)
T PRK14875 112 RKARI-GGRTVRYLRLGEG---DGTPVVLIHGFGGDLNNWLFNHAALAA--GRPVIALDLPGHGASSKAVGAGSLDELAA 185 (371)
T ss_pred CcceE-cCcEEEEecccCC---CCCeEEEECCCCCccchHHHHHHHHhc--CCEEEEEcCCCCCCCCCCCCCCCHHHHHH
Confidence 34555 6778999988864 468999999999999999999888876 499999999999999643 3568999999
Q ss_pred HHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhch
Q 037354 116 DIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIP 195 (346)
Q Consensus 116 ~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (346)
++.++++.++. .+++++|||+||.+++.+|..+|+++.++|++++..... ... ..+...... ....
T Consensus 186 ~~~~~~~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~--~~~-----~~~~~~~~~------~~~~ 251 (371)
T PRK14875 186 AVLAFLDALGI-ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGP--EIN-----GDYIDGFVA------AESR 251 (371)
T ss_pred HHHHHHHhcCC-ccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCc--ccc-----hhHHHHhhc------ccch
Confidence 99999999998 699999999999999999999999999999998763210 000 001000000 0000
Q ss_pred hhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCC
Q 037354 196 GLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPH 275 (346)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~ 275 (346)
..+..++.. .+. ...................... .............. .. ........+.+
T Consensus 252 ~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~-----~~~~~~~~l~~ 312 (371)
T PRK14875 252 RELKPVLEL-LFA-------DPALVTRQMVEDLLKYKRLDGV---DDALRALADALFAG---GR-----QRVDLRDRLAS 312 (371)
T ss_pred hHHHHHHHH-Hhc-------ChhhCCHHHHHHHHHHhccccH---HHHHHHHHHHhccC---cc-----cchhHHHHHhc
Confidence 000000000 000 0000000000111111000000 00000000000000 00 00011123344
Q ss_pred CCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhc
Q 037354 276 NESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 276 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
+++|+|+++|++|.++|.+..+.+ .+++++.+++++||+++++ |+++++.|.+||++
T Consensus 313 i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 313 LAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 566699999999999998766543 3468999999999999999 99999999999975
No 41
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.96 E-value=2.9e-27 Score=198.91 Aligned_cols=265 Identities=17% Similarity=0.140 Sum_probs=160.9
Q ss_pred eecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcc-------------------------c-ccchHHHHHhcCeEEE
Q 037354 39 IRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEM-------------------------N-FPASQELIESLGIYFV 92 (346)
Q Consensus 39 ~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~-------------------------~-~~~~~~l~~~~g~~vi 92 (346)
+...+|.+|++..|.+.+ ++.+|+++||++.+... | ..+++.|.++ ||+|+
T Consensus 2 ~~~~~g~~l~~~~~~~~~--~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~-G~~V~ 78 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN--AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN-GYSVY 78 (332)
T ss_pred ccCCCCCeEEEeeeeccC--CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC-CCcEE
Confidence 345589999999987643 67899999999988751 1 2467788776 99999
Q ss_pred EECCCCCCCCCCCC---c--ccHHHHHHHHHHHHHHcC----------------------C-CCeEEEEEEccChHHHHH
Q 037354 93 LYDRAGYGESDPNP---R--RTVKSEAFDIVELADQLQ----------------------L-GSKFYVIGVSIGSYPTWS 144 (346)
Q Consensus 93 ~~D~~G~G~S~~~~---~--~~~~~~~~~l~~~l~~l~----------------------~-~~~~~lvGhS~Gg~~a~~ 144 (346)
++|+||||.|+... . .+++++++|+.++++... . +.+++++||||||.+++.
T Consensus 79 ~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 79 GLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred EecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 99999999998532 2 389999999999987642 1 258999999999999999
Q ss_pred hHhhccC--------ceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCC
Q 037354 145 CLKYIPH--------RLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERN 216 (346)
Q Consensus 145 ~a~~~p~--------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (346)
++..+++ .++++|+++|.........+.......+.. .....+.. +.+..... .
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~---~l~~~~~~-------------~~p~~~~~--~ 220 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYL---PVMNFMSR-------------VFPTFRIS--K 220 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHH---HHHHHHHH-------------HCCccccc--C
Confidence 9876543 589999998864321000000000000000 00111111 11111000 0
Q ss_pred CccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHH
Q 037354 217 PVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQ 296 (346)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~ 296 (346)
...+. .+......+..++.......... +...+......... ....+. .++|+|+++|++|.+++++.+
T Consensus 221 ~~~~~-~~~~~~~~~~~Dp~~~~~~~s~~-~~~~l~~~~~~~~~----~~~~i~-----~~~P~Lii~G~~D~vv~~~~~ 289 (332)
T TIGR01607 221 KIRYE-KSPYVNDIIKFDKFRYDGGITFN-LASELIKATDTLDC----DIDYIP-----KDIPILFIHSKGDCVCSYEGT 289 (332)
T ss_pred ccccc-cChhhhhHHhcCccccCCcccHH-HHHHHHHHHHHHHh----hHhhCC-----CCCCEEEEEeCCCCccCHHHH
Confidence 00011 11222222333332211111111 11111111110000 011121 145599999999999999999
Q ss_pred HHHHHhc--CCceEEEecCCCcceeec--cchhHHHHHHHhhc
Q 037354 297 RFISRKL--SWIKYHEVRDGGHLILHY--NGMCDYFLRALLVG 335 (346)
Q Consensus 297 ~~~~~~~--~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~~ 335 (346)
+.+.+.. ++.+++++++++|.++.| .+++.+.|.+||++
T Consensus 290 ~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 290 VSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred HHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 8887765 578999999999999997 68899999999863
No 42
>PLN02511 hydrolase
Probab=99.95 E-value=1.9e-27 Score=203.96 Aligned_cols=277 Identities=13% Similarity=0.079 Sum_probs=159.2
Q ss_pred CccccceeecCCCceEEEEEcCC---CCCCCCeEEEEEcCCCCCCcc-c-ccchHHHHHhcCeEEEEECCCCCCCCCCCC
Q 037354 32 GLVDAARIRLSDGRYLAYREKGV---SKIESNYRIVLVHGFGSSKEM-N-FPASQELIESLGIYFVLYDRAGYGESDPNP 106 (346)
Q Consensus 32 ~~~~~~~~~~~~g~~l~~~~~g~---~~~~~~~~vl~lhG~~~~~~~-~-~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~ 106 (346)
...++..+.+.||..+.+..... ....++|+||++||+++++.. | ..++..+.++ ||+|+++|+||||.|....
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~-g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSK-GWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHC-CCEEEEEecCCCCCCCCCC
Confidence 34566788899998888754321 112357899999999877643 4 3455555555 9999999999999997532
Q ss_pred -cccHHHHHHHHHHHHHHcCC---CCeEEEEEEccChHHHHHhHhhccCc--eeeeEEecccCCCCCCCCCcchhhHHHh
Q 037354 107 -RRTVKSEAFDIVELADQLQL---GSKFYVIGVSIGSYPTWSCLKYIPHR--LAGVALIVPTINYEWPSLPQSLIRTDYR 180 (346)
Q Consensus 107 -~~~~~~~~~~l~~~l~~l~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~ 180 (346)
......+++|+.+++++++. ..+++++||||||.+++.++.++|++ |.+++++++.... ......+.
T Consensus 148 ~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l-------~~~~~~~~ 220 (388)
T PLN02511 148 PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL-------VIADEDFH 220 (388)
T ss_pred cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH-------HHHHHHHh
Confidence 33445677788888877753 14899999999999999999999987 8888888765321 00111111
Q ss_pred hhhhh-hHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhc
Q 037354 181 RRLIQ-WSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAF 259 (346)
Q Consensus 181 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (346)
..... ....+.......+.. ....+....................+......... ..... ..+..
T Consensus 221 ~~~~~~y~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~--gf~~~----~~yy~------ 286 (388)
T PLN02511 221 KGFNNVYDKALAKALRKIFAK--HALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSF--GFKSV----DAYYS------ 286 (388)
T ss_pred ccHHHHHHHHHHHHHHHHHHH--HHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcC--CCCCH----HHHHH------
Confidence 10000 000000000000000 00000000000000000000000000000000000 00000 00000
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHH-HHHHHhcCCceEEEecCCCcceeec-cch------hHHHHHH
Q 037354 260 GDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQ-RFISRKLSWIKYHEVRDGGHLILHY-NGM------CDYFLRA 331 (346)
Q Consensus 260 ~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e-~~~------~~~~i~~ 331 (346)
..+...-+++|++|+|+|+|++|+++|.+.. ..+.+.+|++++++++++||+.++| |+. +.+.|.+
T Consensus 287 ------~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~ 360 (388)
T PLN02511 287 ------NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVME 360 (388)
T ss_pred ------HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHH
Confidence 0012233556677799999999999998765 4566778999999999999999999 876 4899999
Q ss_pred Hhhcc
Q 037354 332 LLVGE 336 (346)
Q Consensus 332 fl~~~ 336 (346)
||+..
T Consensus 361 Fl~~~ 365 (388)
T PLN02511 361 FLEAL 365 (388)
T ss_pred HHHHH
Confidence 99764
No 43
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.95 E-value=2e-27 Score=233.88 Aligned_cols=259 Identities=14% Similarity=0.105 Sum_probs=160.9
Q ss_pred EEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC---------cccHHHHHHHH
Q 037354 47 LAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP---------RRTVKSEAFDI 117 (346)
Q Consensus 47 l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---------~~~~~~~~~~l 117 (346)
++|...|... ++++|||+||++++...|..++..|.+ +|+|+++|+||||.|.... .++++++++++
T Consensus 1360 i~~~~~G~~~--~~~~vVllHG~~~s~~~w~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l 1435 (1655)
T PLN02980 1360 IKVHEVGQNA--EGSVVLFLHGFLGTGEDWIPIMKAISG--SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLL 1435 (1655)
T ss_pred EEEEecCCCC--CCCeEEEECCCCCCHHHHHHHHHHHhC--CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHH
Confidence 4455566432 568999999999999999999998876 4899999999999997532 35899999999
Q ss_pred HHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhh-hhhHHHHHhhchh
Q 037354 118 VELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRL-IQWSLWIAKHIPG 196 (346)
Q Consensus 118 ~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 196 (346)
.+++++++. ++++++||||||.+++.++.++|++|+++|++++.+.. ...... ...... ......+.. .
T Consensus 1436 ~~ll~~l~~-~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~-----~~~~~~-~~~~~~~~~~~~~l~~---~ 1505 (1655)
T PLN02980 1436 YKLIEHITP-GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGL-----KDEVAR-KIRSAKDDSRARMLID---H 1505 (1655)
T ss_pred HHHHHHhCC-CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCcc-----CchHHH-HHHhhhhhHHHHHHHh---h
Confidence 999999998 69999999999999999999999999999999875321 111100 000000 000000000 0
Q ss_pred hhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCC
Q 037354 197 LLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHN 276 (346)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i 276 (346)
....+...++...... ... ......+.+........ .......+. ..... ...++...+.++
T Consensus 1506 -g~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~l~-~~~~~------~~~dl~~~L~~I 1567 (1655)
T PLN02980 1506 -GLEIFLENWYSGELWK--SLR-NHPHFNKIVASRLLHKD-------VPSLAKLLS-DLSIG------RQPSLWEDLKQC 1567 (1655)
T ss_pred -hHHHHHHHhccHHHhh--hhc-cCHHHHHHHHHHHhcCC-------HHHHHHHHH-Hhhhc------ccchHHHHHhhC
Confidence 0001111121110000 000 00000011111110000 000000000 00000 001122235556
Q ss_pred CCcEEEEecCCCCCCchhHHHHHHHhcCC------------ceEEEecCCCcceeec-cchhHHHHHHHhhcccc
Q 037354 277 ESSVHIWQGYEDKVVPFQLQRFISRKLSW------------IKYHEVRDGGHLILHY-NGMCDYFLRALLVGEES 338 (346)
Q Consensus 277 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------------~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~~~ 338 (346)
++|+|+|+|++|..++ +..+.+.+.+++ +++++++++||++++| |+++++.|.+||++.+.
T Consensus 1568 ~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1568 DTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred CCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccc
Confidence 6679999999999885 666677777765 4899999999999999 99999999999998754
No 44
>PRK05855 short chain dehydrogenase; Validated
Probab=99.95 E-value=3.7e-27 Score=215.68 Aligned_cols=277 Identities=17% Similarity=0.141 Sum_probs=161.9
Q ss_pred eeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC---cccHHHHH
Q 037354 38 RIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP---RRTVKSEA 114 (346)
Q Consensus 38 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~ 114 (346)
.+...+|.+++|..+|++ .+|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+. .+++++++
T Consensus 6 ~~~~~~g~~l~~~~~g~~---~~~~ivllHG~~~~~~~w~~~~~~L~~--~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGDP---DRPTVVLVHGYPDNHEVWDGVAPLLAD--RFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred EEEeeCCEEEEEEEcCCC---CCCeEEEEcCCCchHHHHHHHHHHhhc--ceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 344458999999999875 478999999999999999999999854 7999999999999998543 46899999
Q ss_pred HHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhh--ccCceeeeEEecccCCCCCCCCCcchhhHHHhhh-h----h-hh
Q 037354 115 FDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKY--IPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRR-L----I-QW 186 (346)
Q Consensus 115 ~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~-~----~-~~ 186 (346)
+|+.+++++++.+++++++||||||.+++.++.+ +++++..++.+++... . ....+... . . ..
T Consensus 81 ~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~ 151 (582)
T PRK05855 81 DDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSL------D---HVGFWLRSGLRRPTPRRL 151 (582)
T ss_pred HHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCch------H---HHHHHHhhcccccchhhh
Confidence 9999999999874459999999999999888776 2345555554443210 0 00000000 0 0 00
Q ss_pred HHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCC
Q 037354 187 SLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDP 266 (346)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (346)
...............+....+..... ..................... ...................... ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~ 222 (582)
T PRK05855 152 ARALGQLLRSWYIYLFHLPVLPELLW----RLGLGRAWPRLLRRVEGTPVD---PIPTQTTLSDGAHGVKLYRANM--IR 222 (582)
T ss_pred hHHHHHHhhhHHHHHHhCCCCcHHHh----ccchhhHHHHhhhhccCCCcc---hhhhhhhhccccchHHHHHhhh--hh
Confidence 00000000000000000000000000 000000000000000000000 0000000000000000000000 00
Q ss_pred CCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhcccc
Q 037354 267 VRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGEES 338 (346)
Q Consensus 267 ~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~~~ 338 (346)
........++++|+++|+|++|.++|++..+.+.+.+++.++++++ +||+++.| |+++.+.|.+|+++...
T Consensus 223 ~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 223 SLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred hhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhccC
Confidence 0111224456777999999999999999998888888888888887 69999999 99999999999987653
No 45
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.95 E-value=8e-27 Score=169.97 Aligned_cols=248 Identities=20% Similarity=0.203 Sum_probs=171.0
Q ss_pred ccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCC-CcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc-c---c
Q 037354 35 DAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSS-KEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR-R---T 109 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~-~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-~---~ 109 (346)
++..+.+ +|.+|.|..+|.+ ...||+++|.-++ ...|.+.+..+.+...+.++++|.||+|.|.++.. + -
T Consensus 22 te~kv~v-ng~ql~y~~~G~G----~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~f 96 (277)
T KOG2984|consen 22 TESKVHV-NGTQLGYCKYGHG----PNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQF 96 (277)
T ss_pred hhheeee-cCceeeeeecCCC----CceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHH
Confidence 4455566 8999999999985 3578888886555 55688877777776568899999999999987664 2 4
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhh--hhhH
Q 037354 110 VKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRL--IQWS 187 (346)
Q Consensus 110 ~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 187 (346)
+..-+++...+++.|+. +++.++|+|-||..|+..|+++++.|..+|+.++..-. .......+.... .+|.
T Consensus 97 f~~Da~~avdLM~aLk~-~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayv------n~~~~ma~kgiRdv~kWs 169 (277)
T KOG2984|consen 97 FMKDAEYAVDLMEALKL-EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYV------NHLGAMAFKGIRDVNKWS 169 (277)
T ss_pred HHHhHHHHHHHHHHhCC-CCeeEeeecCCCeEEEEeeccChhhhhhheeeccccee------cchhHHHHhchHHHhhhh
Confidence 55667778899999999 79999999999999999999999999999999886421 111111111110 0111
Q ss_pred HHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCC
Q 037354 188 LWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPV 267 (346)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (346)
.+...- .......+.+.... ..+.+... .+.... +-.
T Consensus 170 ~r~R~P-------------------------~e~~Yg~e~f~~~w------------a~wvD~v~-----qf~~~~-dG~ 206 (277)
T KOG2984|consen 170 ARGRQP-------------------------YEDHYGPETFRTQW------------AAWVDVVD-----QFHSFC-DGR 206 (277)
T ss_pred hhhcch-------------------------HHHhcCHHHHHHHH------------HHHHHHHH-----HHhhcC-CCc
Confidence 110000 00000001111100 00111110 000000 001
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhccc
Q 037354 268 RLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGEE 337 (346)
Q Consensus 268 ~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~~ 337 (346)
-.+.-+++++||+||++|++|+.++...+-.+....+.+++++.+.++|.+++. +++|+..+.+||++.+
T Consensus 207 fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~~ 277 (277)
T KOG2984|consen 207 FCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKSTE 277 (277)
T ss_pred hHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhccC
Confidence 123356788899999999999999999999899999999999999999999999 9999999999998753
No 46
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.94 E-value=5.8e-26 Score=168.55 Aligned_cols=221 Identities=16% Similarity=0.131 Sum_probs=148.8
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCC-CcccHHHHHHHHHHHHHHc---CCCCeEEEEEE
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPN-PRRTVKSEAFDIVELADQL---QLGSKFYVIGV 135 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~~l~~~l~~l---~~~~~~~lvGh 135 (346)
+..|||+||+.++....+.+.+.|.++ ||.|.++.+||||..... -..+.++|.+++.+.-++| +. +.|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~-GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy-~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNEN-GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGY-DEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHC-CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCC-CeEEEEee
Confidence 369999999999999999999999988 999999999999977521 2347777777777665554 56 69999999
Q ss_pred ccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccC
Q 037354 136 SIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLER 215 (346)
Q Consensus 136 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (346)
||||.+++.+|..+| ++++|.+++....... .. .......+...
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~-------~~-iie~~l~y~~~-------------------------- 136 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSW-------RI-IIEGLLEYFRN-------------------------- 136 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccc-------hh-hhHHHHHHHHH--------------------------
Confidence 999999999999998 9999999987542100 00 00000011100
Q ss_pred CCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhH
Q 037354 216 NPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQL 295 (346)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~ 295 (346)
...+...+.+.+......... ........+. .+.. .+...+..|..|+++++|.+|+.+|.+.
T Consensus 137 -~kk~e~k~~e~~~~e~~~~~~-~~~~~~~~~~-~~i~--------------~~~~~~~~I~~pt~vvq~~~D~mv~~~s 199 (243)
T COG1647 137 -AKKYEGKDQEQIDKEMKSYKD-TPMTTTAQLK-KLIK--------------DARRSLDKIYSPTLVVQGRQDEMVPAES 199 (243)
T ss_pred -hhhccCCCHHHHHHHHHHhhc-chHHHHHHHH-HHHH--------------HHHhhhhhcccchhheecccCCCCCHHH
Confidence 011111222222222111110 0001111111 1111 1222333444559999999999999999
Q ss_pred HHHHHHhc--CCceEEEecCCCcceeec--cchhHHHHHHHhhc
Q 037354 296 QRFISRKL--SWIKYHEVRDGGHLILHY--NGMCDYFLRALLVG 335 (346)
Q Consensus 296 ~~~~~~~~--~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~~ 335 (346)
+..+.+.. .+.++.+++++||.+..+ .+++.+.|..||+.
T Consensus 200 A~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 200 ANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 98888877 356899999999999996 99999999999974
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.94 E-value=1.2e-25 Score=178.74 Aligned_cols=268 Identities=16% Similarity=0.100 Sum_probs=170.0
Q ss_pred ceEEEEEc-CCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHH
Q 037354 45 RYLAYREK-GVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQ 123 (346)
Q Consensus 45 ~~l~~~~~-g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~ 123 (346)
.++.|... -..+....|+++++||+.++...|..+...|+...+-.|++.|.|.||.|......+..++++|+..+++.
T Consensus 36 ~~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~ 115 (315)
T KOG2382|consen 36 VRLAYDSVYSSENLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDG 115 (315)
T ss_pred cccceeeeecccccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHH
Confidence 34555544 23333468999999999999999999999999998889999999999999988888999999999999998
Q ss_pred cC----CCCeEEEEEEccCh-HHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhh-hhHHHHHhhchhh
Q 037354 124 LQ----LGSKFYVIGVSIGS-YPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLI-QWSLWIAKHIPGL 197 (346)
Q Consensus 124 l~----~~~~~~lvGhS~Gg-~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 197 (346)
.+ . .+++++|||||| .+++..+..+|+.+..+|.++-.+.. -+.......+.+..+.. ...... ......
T Consensus 116 v~~~~~~-~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~--~~~~~~e~~e~i~~m~~~d~~~~~-~~~rke 191 (315)
T KOG2382|consen 116 VGGSTRL-DPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGG--VGRSYGEYRELIKAMIQLDLSIGV-SRGRKE 191 (315)
T ss_pred ccccccc-CCceecccCcchHHHHHHHHHhcCcccceeEEEecCCcc--CCcccchHHHHHHHHHhccccccc-cccHHH
Confidence 85 4 589999999999 77888888999999999999876531 11111122222221111 000000 000000
Q ss_pred hHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCC-C--CcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCC
Q 037354 198 LYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGF-P--MLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFP 274 (346)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~ 274 (346)
....+.... ........+...... . ...........+...+. .+. ....| .++.+ .
T Consensus 192 ~~~~l~~~~-------------~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~-~~~-~~s~~-~~l~~-----~ 250 (315)
T KOG2382|consen 192 ALKSLIEVG-------------FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLD-EYE-ILSYW-ADLED-----G 250 (315)
T ss_pred HHHHHHHHh-------------cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHH-HHH-hhccc-ccccc-----c
Confidence 000000000 000000111111110 0 00000011111111111 110 11111 11211 2
Q ss_pred CCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhccc
Q 037354 275 HNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGEE 337 (346)
Q Consensus 275 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~~ 337 (346)
....||+++.|.++..++.+....+.+.+|+++++.++++||+++.| |++|.+.|.+|+++.+
T Consensus 251 ~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 251 PYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred ccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 23445999999999999999999999999999999999999999999 9999999999998654
No 48
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=8.7e-26 Score=191.89 Aligned_cols=278 Identities=12% Similarity=0.112 Sum_probs=161.5
Q ss_pred CCceEEEEEcCCCCCCCCeEEEEEcCCCCCCc-------------ccccchH--HHHHhcCeEEEEECCCCCCCCCC---
Q 037354 43 DGRYLAYREKGVSKIESNYRIVLVHGFGSSKE-------------MNFPASQ--ELIESLGIYFVLYDRAGYGESDP--- 104 (346)
Q Consensus 43 ~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~-------------~~~~~~~--~l~~~~g~~vi~~D~~G~G~S~~--- 104 (346)
...+++|+.+|..+....++||++|++.+++. .|..++- ...+...|.||++|..|-|.|..
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 35689999999877666789999999988642 2544432 11222369999999998765321
Q ss_pred -------------------CCcccHHHHHHHHHHHHHHcCCCCeEE-EEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 105 -------------------NPRRTVKSEAFDIVELADQLQLGSKFY-VIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 105 -------------------~~~~~~~~~~~~l~~~l~~l~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
.+.++++++++++.++++++++ +++. ++||||||++++.+|.++|++|+++|++++...
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi-~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGI-ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 1125899999999999999999 6876 999999999999999999999999999988643
Q ss_pred CCCCCCCcchhhHHHhhhhh-h--h-----------HHHHHhhchhhhHHHHhhhcCCCcccc----cCCC--ccCcccc
Q 037354 165 YEWPSLPQSLIRTDYRRRLI-Q--W-----------SLWIAKHIPGLLYWWISQKVVPSTSVL----ERNP--VYFSDRD 224 (346)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~-~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~ 224 (346)
.. ..........+..... . | ...+.........+.....++...... .... .......
T Consensus 198 ~~--~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~ 275 (389)
T PRK06765 198 ND--AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTS 275 (389)
T ss_pred CC--hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhh
Confidence 21 0000000010111000 0 0 000000000000011111111100000 0000 0000000
Q ss_pred H-HHHhh----hcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCC--CCCCCCCCCCCCCCcEEEEecCCCCCCchhHHH
Q 037354 225 I-EVLKT----TKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGF--DPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQR 297 (346)
Q Consensus 225 ~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~ 297 (346)
. ..+.. +...... ..+. .+.+ ....++. ...++...+.++++|+|+|+|++|.++|++..+
T Consensus 276 ~e~yl~~~~~~~~~~~Da-------n~~l-~l~~----a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~ 343 (389)
T PRK06765 276 FEKEINKATYRRAELVDA-------NHWL-YLAK----AVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNY 343 (389)
T ss_pred HHHHHHHHHHHhhhccCh-------hhHH-HHHH----HHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHH
Confidence 0 11111 1110000 0000 0000 0000000 001233345567777999999999999999999
Q ss_pred HHHHhcC----CceEEEecC-CCcceeec-cchhHHHHHHHhhc
Q 037354 298 FISRKLS----WIKYHEVRD-GGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 298 ~~~~~~~----~~~~~~i~~-~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
.+.+.++ +++++++++ +||+.+++ |+++++.|.+||++
T Consensus 344 ~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 344 KMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9988886 689999986 99999998 99999999999975
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.93 E-value=1.4e-24 Score=186.99 Aligned_cols=240 Identities=13% Similarity=0.066 Sum_probs=152.7
Q ss_pred ccccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCC-cccccchHHHHHhcCeEEEEECCCCCCCCCCCC-cccH
Q 037354 33 LVDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSK-EMNFPASQELIESLGIYFVLYDRAGYGESDPNP-RRTV 110 (346)
Q Consensus 33 ~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~-~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~ 110 (346)
+.+...+...+|.++....+.+...++.|+||++||+++.. ..|..+...|+++ ||.|+++|+||+|.|.... ..+.
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~-Gy~vl~~D~pG~G~s~~~~~~~d~ 245 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPR-GIAMLTIDMPSVGFSSKWKLTQDS 245 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhC-CCEEEEECCCCCCCCCCCCccccH
Confidence 44566677767767887766544334567777777777654 4677777788766 9999999999999996532 2344
Q ss_pred HHHHHHHHHHHHHc---CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhH
Q 037354 111 KSEAFDIVELADQL---QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWS 187 (346)
Q Consensus 111 ~~~~~~l~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (346)
.....++.+.+... +. +++.++||||||.+++.+|..+|++|+++|++++.... +.. ......
T Consensus 246 ~~~~~avld~l~~~~~vd~-~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~----~~~---~~~~~~------ 311 (414)
T PRK05077 246 SLLHQAVLNALPNVPWVDH-TRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHT----LLT---DPKRQQ------ 311 (414)
T ss_pred HHHHHHHHHHHHhCcccCc-ccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccch----hhc---chhhhh------
Confidence 44555666666554 44 68999999999999999999999999999999986421 000 000000
Q ss_pred HHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCC
Q 037354 188 LWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPV 267 (346)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (346)
..+......+... +. ....+.+.+... +. .|.....
T Consensus 312 -----~~p~~~~~~la~~-lg-----------~~~~~~~~l~~~-------------------l~--------~~sl~~~ 347 (414)
T PRK05077 312 -----QVPEMYLDVLASR-LG-----------MHDASDEALRVE-------------------LN--------RYSLKVQ 347 (414)
T ss_pred -----hchHHHHHHHHHH-hC-----------CCCCChHHHHHH-------------------hh--------hccchhh
Confidence 0000000000000 00 000000101000 00 0000000
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhcc
Q 037354 268 RLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGE 336 (346)
Q Consensus 268 ~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 336 (346)
.+. ..++++|+|+|+|++|+++|.+..+.+.+..++.++++++++ ++.+ ++++.+.|.+||++.
T Consensus 348 ~~l--~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 348 GLL--GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred hhh--ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 000 034666699999999999999999999998999999999985 4556 999999999999753
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.93 E-value=1.9e-23 Score=175.98 Aligned_cols=273 Identities=11% Similarity=0.029 Sum_probs=150.5
Q ss_pred ccccceeecCCCceEEEEEcC-CCCCCCCeEEEEEcCCCCCCcc--cccchHHHHHhcCeEEEEECCCCCCCCCCCC--c
Q 037354 33 LVDAARIRLSDGRYLAYREKG-VSKIESNYRIVLVHGFGSSKEM--NFPASQELIESLGIYFVLYDRAGYGESDPNP--R 107 (346)
Q Consensus 33 ~~~~~~~~~~~g~~l~~~~~g-~~~~~~~~~vl~lhG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~ 107 (346)
......+++.||..+.+.... +....++|+||++||++++... +..++..|.++ ||+|+++|+||||.+.... .
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~g~~~~~~~~~ 108 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKR-GWLGVVMHFRGCSGEPNRLHRI 108 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHC-CCEEEEEeCCCCCCCccCCcce
Confidence 445667889899877654332 2222357899999999887543 34567777766 9999999999999875321 1
Q ss_pred c---cHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCc--eeeeEEecccCCCCCCCCCcchhhHHHhhh
Q 037354 108 R---TVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHR--LAGVALIVPTINYEWPSLPQSLIRTDYRRR 182 (346)
Q Consensus 108 ~---~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 182 (346)
+ ..+|....+..+.++++. .+++++||||||.+++.++..+++. +.++|++++.... ..........
T Consensus 109 ~~~~~~~D~~~~i~~l~~~~~~-~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~-------~~~~~~~~~~ 180 (324)
T PRK10985 109 YHSGETEDARFFLRWLQREFGH-VPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML-------EACSYRMEQG 180 (324)
T ss_pred ECCCchHHHHHHHHHHHHhCCC-CCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH-------HHHHHHHhhh
Confidence 2 233433333334445565 6899999999999988888877654 8999999886421 1011111110
Q ss_pred hhhhHHH-HHhhchhhhHHHHhhhcCCCcccccCCCc-cCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcC
Q 037354 183 LIQWSLW-IAKHIPGLLYWWISQKVVPSTSVLERNPV-YFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFG 260 (346)
Q Consensus 183 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (346)
....... +......... .....+.... ..... .........+......... . .......+.
T Consensus 181 ~~~~~~~~l~~~l~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~fd~~~~~~~~----g-~~~~~~~y~-------- 243 (324)
T PRK10985 181 FSRVYQRYLLNLLKANAA-RKLAAYPGTL---PINLAQLKSVRRLREFDDLITARIH----G-FADAIDYYR-------- 243 (324)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHhccccc---cCCHHHHhcCCcHHHHhhhheeccC----C-CCCHHHHHH--------
Confidence 0000000 0000000000 0000010000 00000 0000001111111111000 0 000000000
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-c-----chhHHHHHHHhh
Q 037354 261 DWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-N-----GMCDYFLRALLV 334 (346)
Q Consensus 261 ~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~-----~~~~~~i~~fl~ 334 (346)
. .+...-+.++++|+++|+|++|++++++....+.+..+++++++++++||+.+++ . .-..+.+.+|++
T Consensus 244 ~-----~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~ 318 (324)
T PRK10985 244 Q-----CSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLT 318 (324)
T ss_pred H-----CChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHH
Confidence 0 0111223456666999999999999988887777788899999999999999987 3 356778888886
Q ss_pred cc
Q 037354 335 GE 336 (346)
Q Consensus 335 ~~ 336 (346)
..
T Consensus 319 ~~ 320 (324)
T PRK10985 319 TY 320 (324)
T ss_pred Hh
Confidence 54
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=99.92 E-value=1.4e-23 Score=169.09 Aligned_cols=127 Identities=17% Similarity=0.186 Sum_probs=98.8
Q ss_pred ccccceeecCCCceEEEEEcCCCC--CCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCC-CCCCCCC-cc
Q 037354 33 LVDAARIRLSDGRYLAYREKGVSK--IESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGY-GESDPNP-RR 108 (346)
Q Consensus 33 ~~~~~~~~~~~g~~l~~~~~g~~~--~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S~~~~-~~ 108 (346)
....+.+.+.+|.+|..+..-+.. ..+.++||++||+++....+..+++.|.++ ||.|+.+|+||+ |.|+..- ..
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~-G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSN-GFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHC-CCEEEEecCCCCCCCCCCccccC
Confidence 335667888899999999887642 235689999999999877788888999877 999999999988 9997543 22
Q ss_pred cHHHHHHHHHHHHHHc---CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 109 TVKSEAFDIVELADQL---QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 109 ~~~~~~~~l~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
+.....+|+.++++.+ +. +++.|+||||||.+|+..|... +++++|+.+|..
T Consensus 87 t~s~g~~Dl~aaid~lk~~~~-~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~ 141 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTRGI-NNLGLIAASLSARIAYEVINEI--DLSFLITAVGVV 141 (307)
T ss_pred cccccHHHHHHHHHHHHhcCC-CceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcc
Confidence 4444566776555554 44 6899999999999997777643 499999999975
No 52
>PLN02872 triacylglycerol lipase
Probab=99.92 E-value=2e-23 Score=177.40 Aligned_cols=133 Identities=20% Similarity=0.234 Sum_probs=102.9
Q ss_pred CCCCccccceeecCCCceEEEEEcCCCC----CCCCeEEEEEcCCCCCCccccc------chHHHHHhcCeEEEEECCCC
Q 037354 29 NGDGLVDAARIRLSDGRYLAYREKGVSK----IESNYRIVLVHGFGSSKEMNFP------ASQELIESLGIYFVLYDRAG 98 (346)
Q Consensus 29 ~~~~~~~~~~~~~~~g~~l~~~~~g~~~----~~~~~~vl~lhG~~~~~~~~~~------~~~~l~~~~g~~vi~~D~~G 98 (346)
...++.+++++++.||..|.......+. ...+|+|||+||+++++..|.. +...|+++ ||+|+++|+||
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~-GydV~l~n~RG 117 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADH-GFDVWVGNVRG 117 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhC-CCCcccccccc
Confidence 3467889999999999999988864221 1246899999999999988852 33346655 99999999999
Q ss_pred CCCCCC-------CC---cccHHHHH-HHHHHHHHHc---CCCCeEEEEEEccChHHHHHhHhhccC---ceeeeEEecc
Q 037354 99 YGESDP-------NP---RRTVKSEA-FDIVELADQL---QLGSKFYVIGVSIGSYPTWSCLKYIPH---RLAGVALIVP 161 (346)
Q Consensus 99 ~G~S~~-------~~---~~~~~~~~-~~l~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lil~~~ 161 (346)
++.|.. .. ++++++++ .|+.++++++ .. ++++++||||||.+++.++ .+|+ +|+.+++++|
T Consensus 118 ~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P 195 (395)
T PLN02872 118 TRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCP 195 (395)
T ss_pred cccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcc
Confidence 886531 11 35888888 7999999886 33 6899999999999998655 5676 6889999998
Q ss_pred cCC
Q 037354 162 TIN 164 (346)
Q Consensus 162 ~~~ 164 (346)
...
T Consensus 196 ~~~ 198 (395)
T PLN02872 196 ISY 198 (395)
T ss_pred hhh
Confidence 753
No 53
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.91 E-value=1.9e-22 Score=176.04 Aligned_cols=257 Identities=10% Similarity=0.000 Sum_probs=148.4
Q ss_pred CCeEEEEEcCCCCCCcccc-----cchHHHHHhcCeEEEEECCCCCCCCCCCC---cccHHHHHHHHHHHHHHcCCCCeE
Q 037354 59 SNYRIVLVHGFGSSKEMNF-----PASQELIESLGIYFVLYDRAGYGESDPNP---RRTVKSEAFDIVELADQLQLGSKF 130 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~-----~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~l~~~~~~ 130 (346)
.++|||++||+......|+ .++..|.++ ||+|+++|++|+|.|.... +|..+.+.+.+..+++.++. +++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~-~kv 264 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQ-GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGE-KQV 264 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHC-CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCC-CCe
Confidence 5789999999999888886 578888877 9999999999999886532 33445566667788888888 799
Q ss_pred EEEEEccChHHHH----HhHhhc-cCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhh
Q 037354 131 YVIGVSIGSYPTW----SCLKYI-PHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQK 205 (346)
Q Consensus 131 ~lvGhS~Gg~~a~----~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (346)
+++||||||.++. .+++.+ +++|++++++++..++..++.-.............+.... ....+..........
T Consensus 265 ~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~-~G~lpg~~m~~~F~~ 343 (532)
T TIGR01838 265 NCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGG-GGYLDGRQMAVTFSL 343 (532)
T ss_pred EEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHh-cCCCCHHHHHHHHHh
Confidence 9999999999852 345555 7899999999998776433211111000000001011100 011111100000000
Q ss_pred cCCCcccccC-CCccCcc--ccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEE
Q 037354 206 VVPSTSVLER-NPVYFSD--RDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHI 282 (346)
Q Consensus 206 ~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvli 282 (346)
..+....... ....+.. .....+..+..+............+ ..+..+....... +........+.+|++|+++
T Consensus 344 lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~l-r~ly~~N~L~~G~--~~v~g~~~dL~~I~vPvLv 420 (532)
T TIGR01838 344 LRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYL-RNLYLQNALTTGG--LEVCGVRLDLSKVKVPVYI 420 (532)
T ss_pred cChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHH-HHHHhcCCCcCCe--eEECCEecchhhCCCCEEE
Confidence 0000000000 0000000 0001122222222222222222222 2222221111122 2233445567778888999
Q ss_pred EecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec
Q 037354 283 WQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY 321 (346)
Q Consensus 283 i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 321 (346)
|+|++|.++|.+.+..+.+.+++.+..+++++||.++++
T Consensus 421 V~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 421 IATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVV 459 (532)
T ss_pred EeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhh
Confidence 999999999999999999999999999999999999986
No 54
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.90 E-value=8.5e-22 Score=161.80 Aligned_cols=116 Identities=18% Similarity=0.218 Sum_probs=86.2
Q ss_pred CCceEEEEEcCCCCCCCCeEEEEEcCCCCC----CcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHH
Q 037354 43 DGRYLAYREKGVSKIESNYRIVLVHGFGSS----KEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIV 118 (346)
Q Consensus 43 ~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~----~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~ 118 (346)
+|.++.....-+.+ ..++.||++||++.. ...|..+++.|+++ ||.|+++|+||||.|... ..+++++.+|+.
T Consensus 10 ~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~-G~~v~~~Dl~G~G~S~~~-~~~~~~~~~d~~ 86 (274)
T TIGR03100 10 EGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEA-GFPVLRFDYRGMGDSEGE-NLGFEGIDADIA 86 (274)
T ss_pred CCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchhHHHHHHHHHHHC-CCEEEEeCCCCCCCCCCC-CCCHHHHHHHHH
Confidence 56666655543332 235678888876532 23345667777766 999999999999999753 246777888888
Q ss_pred HHHHHc-----CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 119 ELADQL-----QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 119 ~~l~~l-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
++++.+ +. ++++++||||||.+++.++.. +++|+++|+++|..
T Consensus 87 ~~~~~l~~~~~g~-~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 87 AAIDAFREAAPHL-RRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred HHHHHHHhhCCCC-CcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 887776 45 579999999999999999865 57899999999864
No 55
>PRK11071 esterase YqiA; Provisional
Probab=99.89 E-value=8.3e-22 Score=151.97 Aligned_cols=185 Identities=13% Similarity=0.107 Sum_probs=123.0
Q ss_pred eEEEEEcCCCCCCccccc--chHHHHHh-cCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEcc
Q 037354 61 YRIVLVHGFGSSKEMNFP--ASQELIES-LGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSI 137 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~--~~~~l~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~ 137 (346)
|+|||+||++++...|.. +.+.+.+. .+|+|+++|+|||| ++.++++.+++++++. ++++++||||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----------~~~~~~l~~l~~~~~~-~~~~lvG~S~ 70 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----------ADAAELLESLVLEHGG-DPLGLVGSSL 70 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----------HHHHHHHHHHHHHcCC-CCeEEEEECH
Confidence 589999999999999984 33444432 26899999999985 4688899999999998 6999999999
Q ss_pred ChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCC
Q 037354 138 GSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNP 217 (346)
Q Consensus 138 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (346)
||.+++.+|.++|. .+|+++|.... . .... .+.... .
T Consensus 71 Gg~~a~~~a~~~~~---~~vl~~~~~~~------~----~~~~------------------------~~~~~~------~ 107 (190)
T PRK11071 71 GGYYATWLSQCFML---PAVVVNPAVRP------F----ELLT------------------------DYLGEN------E 107 (190)
T ss_pred HHHHHHHHHHHcCC---CEEEECCCCCH------H----HHHH------------------------HhcCCc------c
Confidence 99999999999984 46888886320 0 0000 000000 0
Q ss_pred ccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHH
Q 037354 218 VYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQR 297 (346)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~ 297 (346)
...... .. ........ +.... +...+. ..+|+++++|++|.++|.+.+.
T Consensus 108 ~~~~~~-----------~~-----~~~~~~~~----d~~~~------~~~~i~-----~~~~v~iihg~~De~V~~~~a~ 156 (190)
T PRK11071 108 NPYTGQ-----------QY-----VLESRHIY----DLKVM------QIDPLE-----SPDLIWLLQQTGDEVLDYRQAV 156 (190)
T ss_pred cccCCC-----------cE-----EEcHHHHH----HHHhc------CCccCC-----ChhhEEEEEeCCCCcCCHHHHH
Confidence 000000 00 00001111 11000 111122 2334999999999999999998
Q ss_pred HHHHhcCCceEEEecCCCcceeeccchhHHHHHHHhh
Q 037354 298 FISRKLSWIKYHEVRDGGHLILHYNGMCDYFLRALLV 334 (346)
Q Consensus 298 ~~~~~~~~~~~~~i~~~gH~~~~e~~~~~~~i~~fl~ 334 (346)
.+.+. ++.++++|++|.+.. .+++.+.|.+|++
T Consensus 157 ~~~~~---~~~~~~~ggdH~f~~-~~~~~~~i~~fl~ 189 (190)
T PRK11071 157 AYYAA---CRQTVEEGGNHAFVG-FERYFNQIVDFLG 189 (190)
T ss_pred HHHHh---cceEEECCCCcchhh-HHHhHHHHHHHhc
Confidence 88874 577889999998832 5788899999875
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.89 E-value=2.8e-21 Score=164.65 Aligned_cols=263 Identities=13% Similarity=0.080 Sum_probs=143.7
Q ss_pred CCeEEEEEcCCCCCCccc-----ccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHH-----HHHHHHHcCCCC
Q 037354 59 SNYRIVLVHGFGSSKEMN-----FPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFD-----IVELADQLQLGS 128 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~-----~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~-----l~~~l~~l~~~~ 128 (346)
.+++||++||+..+...+ ..+++.|.++ ||+|+++|++|+|.|+.. .++++++.+ +..+++..+. +
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~-G~~V~~~D~~g~g~s~~~--~~~~d~~~~~~~~~v~~l~~~~~~-~ 136 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLER-GQDVYLIDWGYPDRADRY--LTLDDYINGYIDKCVDYICRTSKL-D 136 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHC-CCeEEEEeCCCCCHHHhc--CCHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 456899999987665554 4678888876 999999999999987642 355555433 4445555666 6
Q ss_pred eEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhh-hhhHHHHHhhchhhhHHHHhhhcC
Q 037354 129 KFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRL-IQWSLWIAKHIPGLLYWWISQKVV 207 (346)
Q Consensus 129 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 207 (346)
+++++||||||.+++.+++.+|++|+++|++++...+....... ..+.... ...........+..........+.
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~ 212 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNML----SNWARHVDIDLAVDTMGNIPGELLNLTFLMLK 212 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchh----hhhccccCHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 99999999999999999999999999999999886542211100 0000000 000000000011100000000000
Q ss_pred CCccccc---CCCccCccccHHHHh------hhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCC
Q 037354 208 PSTSVLE---RNPVYFSDRDIEVLK------TTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNES 278 (346)
Q Consensus 208 ~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~ 278 (346)
+...... ...... .+.+... .+............. .+...+..........+ ........+.++++
T Consensus 213 p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~w~~d~~~~~~~~~~-~~~~~~~~~n~l~~g~~--~~~~~~~~l~~i~~ 287 (350)
T TIGR01836 213 PFSLGYQKYVNLVDIL--EDERKVENFLRMEKWIFDSPDQAGEAFR-QFVKDFYQQNGLINGEV--EIGGRKVDLKNIKM 287 (350)
T ss_pred cchhhhHHHHHHHHhc--CChHHHHHHHHHHHHhcCCcCccHHHHH-HHHHHHHhcCcccCCee--EECCEEccHHhCCC
Confidence 0000000 000000 0111111 111111111111111 11111111110000111 00111223556677
Q ss_pred cEEEEecCCCCCCchhHHHHHHHhcCC--ceEEEecCCCcceeec----cchhHHHHHHHhhc
Q 037354 279 SVHIWQGYEDKVVPFQLQRFISRKLSW--IKYHEVRDGGHLILHY----NGMCDYFLRALLVG 335 (346)
Q Consensus 279 Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e----~~~~~~~i~~fl~~ 335 (346)
|+++++|++|.++|++..+.+.+.++. .++++++ +||..++. ++++.+.|.+||++
T Consensus 288 Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 288 PILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 799999999999999999999888864 5677777 69988774 47899999999975
No 57
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.89 E-value=7.2e-23 Score=164.93 Aligned_cols=220 Identities=18% Similarity=0.241 Sum_probs=126.3
Q ss_pred eEEEEECCCCCCCCCC-----CCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 89 IYFVLYDRAGYGESDP-----NPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 89 ~~vi~~D~~G~G~S~~-----~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
|+|+++|+||+|.|++ ...++.+++++++..+++.++. ++++++||||||.+++.+|+.+|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI-KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT-SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC-CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 6899999999999995 2356999999999999999999 689999999999999999999999999999999852
Q ss_pred CCCCCCCCcchhhH-HHhhhhhhhHHH-HHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHH-HhhhcCCCCcchh
Q 037354 164 NYEWPSLPQSLIRT-DYRRRLIQWSLW-IAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEV-LKTTKGFPMLTQD 240 (346)
Q Consensus 164 ~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 240 (346)
... .......... .+.......... ............... +.... ........... ....... .
T Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~-~---- 146 (230)
T PF00561_consen 80 DLP-DGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQ-FFAYD------REFVEDFLKQFQSQQYARF-A---- 146 (230)
T ss_dssp HHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH------HHHHHTHHHHHHHHHHHHT-C----
T ss_pred cch-hhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhh-eeecc------CccccchhhccchhhhhHH-H----
Confidence 000 0000000000 000000000000 000000000000000 00000 00000000000 0000000 0
Q ss_pred hhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceee
Q 037354 241 KLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILH 320 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 320 (346)
.......... ........ .+....+.++++|+++++|++|.++|++....+.+.+|+.++++++++||+.+.
T Consensus 147 --~~~~~~~~~~-~~~~~~~~-----~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~ 218 (230)
T PF00561_consen 147 --ETDAFDNMFW-NALGYFSV-----WDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFL 218 (230)
T ss_dssp --HHHHHHHHHH-HHHHHHHH-----HHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHH
T ss_pred --HHHHHhhhcc-cccccccc-----ccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHh
Confidence 0000000000 00000000 011122333566699999999999999999999999999999999999999999
Q ss_pred c-cchhHHHHH
Q 037354 321 Y-NGMCDYFLR 330 (346)
Q Consensus 321 e-~~~~~~~i~ 330 (346)
+ ++++.+.|.
T Consensus 219 ~~~~~~~~~i~ 229 (230)
T PF00561_consen 219 EGPDEFNEIII 229 (230)
T ss_dssp HSHHHHHHHHH
T ss_pred cCHHhhhhhhc
Confidence 8 999998875
No 58
>PRK10566 esterase; Provisional
Probab=99.88 E-value=6e-21 Score=155.52 Aligned_cols=111 Identities=18% Similarity=0.170 Sum_probs=76.2
Q ss_pred EEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC-cccH-------HHHHHHHH
Q 037354 47 LAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP-RRTV-------KSEAFDIV 118 (346)
Q Consensus 47 l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~-------~~~~~~l~ 118 (346)
++|...+.++ ++.|+||++||++++...|..++..|.++ ||+|+++|+||||.+.... ...+ .+..+|+.
T Consensus 15 ~~~~p~~~~~-~~~p~vv~~HG~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (249)
T PRK10566 15 LHAFPAGQRD-TPLPTVFFYHGFTSSKLVYSYFAVALAQA-GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFP 92 (249)
T ss_pred EEEcCCCCCC-CCCCEEEEeCCCCcccchHHHHHHHHHhC-CCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHH
Confidence 4444443221 24689999999999988888888888876 9999999999999763211 1111 12233443
Q ss_pred HHHHHc------CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEec
Q 037354 119 ELADQL------QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIV 160 (346)
Q Consensus 119 ~~l~~l------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~ 160 (346)
++++.+ +. ++++++|||+||.+++.++.++|+....+++++
T Consensus 93 ~~~~~l~~~~~~~~-~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 93 TLRAAIREEGWLLD-DRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHHHhcCCcCc-cceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 333332 33 689999999999999999998886444444444
No 59
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.87 E-value=3.2e-21 Score=148.20 Aligned_cols=125 Identities=21% Similarity=0.231 Sum_probs=98.7
Q ss_pred ccceeecCCCce--EEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--cccH
Q 037354 35 DAARIRLSDGRY--LAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP--RRTV 110 (346)
Q Consensus 35 ~~~~~~~~~g~~--l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~ 110 (346)
+...+.+ +|.. +..+..+++ ...+|.++++||.+.+.-.|..++.++......+|+++|+||||++...+ +.+.
T Consensus 49 ekedv~i-~~~~~t~n~Y~t~~~-~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~ 126 (343)
T KOG2564|consen 49 EKEDVSI-DGSDLTFNVYLTLPS-ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSL 126 (343)
T ss_pred ccccccc-CCCcceEEEEEecCC-CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCH
Confidence 3444555 3433 555555543 34689999999999999999999999998878889999999999997544 4699
Q ss_pred HHHHHHHHHHHHHcC--CCCeEEEEEEccChHHHHHhHhh--ccCceeeeEEeccc
Q 037354 111 KSEAFDIVELADQLQ--LGSKFYVIGVSIGSYPTWSCLKY--IPHRLAGVALIVPT 162 (346)
Q Consensus 111 ~~~~~~l~~~l~~l~--~~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lil~~~~ 162 (346)
+.+++|+.++++.+= ...+++||||||||.+|.+.|.. -|. +.+++.++-.
T Consensus 127 eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 127 ETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 999999999998762 22589999999999999887754 355 8899998864
No 60
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.86 E-value=4.5e-20 Score=141.77 Aligned_cols=216 Identities=20% Similarity=0.207 Sum_probs=146.7
Q ss_pred ccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc-ccHHHH
Q 037354 35 DAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR-RTVKSE 113 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~ 113 (346)
+-..+++..|..+.-...-++. ...++||++||...+......+...|....+++|+.+|++|+|.|...+. ....+-
T Consensus 36 ~v~~~~t~rgn~~~~~y~~~~~-~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~D 114 (258)
T KOG1552|consen 36 EVFKVKTSRGNEIVCMYVRPPE-AAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYAD 114 (258)
T ss_pred ceEEeecCCCCEEEEEEEcCcc-ccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhh
Confidence 3444555556555444443332 24689999999977766655666777776789999999999999987553 233333
Q ss_pred HHHHHHHHH-HcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHh
Q 037354 114 AFDIVELAD-QLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAK 192 (346)
Q Consensus 114 ~~~l~~~l~-~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
++.+-+.++ ..|..++++|+|+|+|+..++.+|.+.| ++++||.+|..+...
T Consensus 115 i~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r------------------------- 167 (258)
T KOG1552|consen 115 IKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMR------------------------- 167 (258)
T ss_pred HHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhh-------------------------
Confidence 333333333 3332279999999999999999999988 999999999743100
Q ss_pred hchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCC
Q 037354 193 HIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNP 272 (346)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p 272 (346)
-+++... .. +.- +.-..-..
T Consensus 168 ------------v~~~~~~---------------~~--~~~-------------------------------d~f~~i~k 187 (258)
T KOG1552|consen 168 ------------VAFPDTK---------------TT--YCF-------------------------------DAFPNIEK 187 (258)
T ss_pred ------------hhccCcc---------------eE--Eee-------------------------------ccccccCc
Confidence 0000000 00 000 00001123
Q ss_pred CCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCc-eEEEecCCCcceeeccchhHHHHHHHhhcccc
Q 037354 273 FPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWI-KYHEVRDGGHLILHYNGMCDYFLRALLVGEES 338 (346)
Q Consensus 273 ~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~~~~~~~i~~fl~~~~~ 338 (346)
+..|+||+|+++|++|.+++......+.+..++. +-.++.|+||.-..-..++.+.+..|+.....
T Consensus 188 I~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 188 ISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred ceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHHhcc
Confidence 4445666999999999999999999999999775 88899999998776566788889999876654
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=2e-19 Score=148.05 Aligned_cols=265 Identities=23% Similarity=0.222 Sum_probs=152.2
Q ss_pred CCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhc-CeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHH
Q 037354 43 DGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESL-GIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELA 121 (346)
Q Consensus 43 ~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l 121 (346)
.+..+.|...+.. +++|+++||++++...|......+.... .|+|+++|+||||.|.. ..++...+++++..++
T Consensus 8 ~~~~~~~~~~~~~----~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~-~~~~~~~~~~~~~~~~ 82 (282)
T COG0596 8 DGVRLAYREAGGG----GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDP-AGYSLSAYADDLAALL 82 (282)
T ss_pred CCeEEEEeecCCC----CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCc-ccccHHHHHHHHHHHH
Confidence 4566777777664 4599999999999999987433444321 28999999999999971 1235555699999999
Q ss_pred HHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhc-hhhhHH
Q 037354 122 DQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHI-PGLLYW 200 (346)
Q Consensus 122 ~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 200 (346)
++++. .+++++|||+||.+++.++.++|++++++|++++............. ....... .......... ......
T Consensus 83 ~~~~~-~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~ 158 (282)
T COG0596 83 DALGL-EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQ--PAGAAPL-AALADLLLGLDAAAFAA 158 (282)
T ss_pred HHhCC-CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCcccc--Cccccch-hhhhhhhhccchhhhhh
Confidence 99998 57999999999999999999999999999999987431000000000 0000000 0000000000 000000
Q ss_pred HHhhh-cCCCcccccCCCccCccccH-HHHhhhcCCCCcchhhhhhhhHHHHhhh-hhhhhcCCCCCCCC-CCCCCCCCC
Q 037354 201 WISQK-VVPSTSVLERNPVYFSDRDI-EVLKTTKGFPMLTQDKLQDRSVFYALRG-DVVAAFGDWGFDPV-RLSNPFPHN 276 (346)
Q Consensus 201 ~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~i~~p~~~i 276 (346)
..... +.... ..... ....... .... ............ ........ ... .......++
T Consensus 159 ~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 220 (282)
T COG0596 159 LLAALGLLAAL----------AAAARAGLAEALR-APLL----GAAAAAFARAARADLAAALLA---LLDRDLRAALARI 220 (282)
T ss_pred hhhcccccccc----------cccchhccccccc-cccc----hhHhhhhhhhcccccchhhhc---ccccccchhhccC
Confidence 00000 00000 00000 0000000 0000 000000000000 00000000 000 233445566
Q ss_pred CCcEEEEecCCCCCCchhHHHHHHHhcCC-ceEEEecCCCcceeec-cchhHHHHHHHhh
Q 037354 277 ESSVHIWQGYEDKVVPFQLQRFISRKLSW-IKYHEVRDGGHLILHY-NGMCDYFLRALLV 334 (346)
Q Consensus 277 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 334 (346)
++|+++++|++|.+.|......+.+..++ .++++++++||+++.+ |+.+.+.+.+|++
T Consensus 221 ~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 221 TVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 77799999999977776666777777885 8999999999999999 9999999988554
No 62
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.85 E-value=1.3e-19 Score=173.40 Aligned_cols=265 Identities=13% Similarity=0.051 Sum_probs=148.1
Q ss_pred CCeEEEEEcCCCCCCcccccc-----hHHHHHhcCeEEEEECCCCCCCCCCCCc---ccHHHHHHHHHHHHHH---cCCC
Q 037354 59 SNYRIVLVHGFGSSKEMNFPA-----SQELIESLGIYFVLYDRAGYGESDPNPR---RTVKSEAFDIVELADQ---LQLG 127 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~-----~~~l~~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~l~~~l~~---l~~~ 127 (346)
.+++|||+||++.+...|+.. ++.|.++ ||+|+++|+ |.|+.+.. .++.+++..+.+.++. +..
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~-g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~- 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRA-GLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTG- 140 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHC-CCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhC-
Confidence 578999999999999999865 6778776 899999995 66655432 3666776666666654 344
Q ss_pred CeEEEEEEccChHHHHHhHhhc-cCceeeeEEecccCCCCCCC---CCcchhhH--HH------hhhh-hhhHHHH-Hhh
Q 037354 128 SKFYVIGVSIGSYPTWSCLKYI-PHRLAGVALIVPTINYEWPS---LPQSLIRT--DY------RRRL-IQWSLWI-AKH 193 (346)
Q Consensus 128 ~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lil~~~~~~~~~~~---~~~~~~~~--~~------~~~~-~~~~~~~-~~~ 193 (346)
++++++||||||.+++.+++.+ +++|+++|++++..++.... ++...... .+ .... ..+.... ...
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 5899999999999999988755 56899999999886543221 11000000 00 0000 0000000 000
Q ss_pred chhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCC--cchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCC
Q 037354 194 IPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPM--LTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSN 271 (346)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 271 (346)
............++... ........ .+....+..... .... .....+...+..........+ ....-..
T Consensus 221 l~p~~~~~~~~~~~~~l---~~~~~~~~---~e~~~~~~~~~~w~~~~g-~~~~~~~~~~~~~n~~~~g~~--~~~~~~~ 291 (994)
T PRK07868 221 LDPVKTAKARVDFLRQL---HDREALLP---REQQRRFLESEGWIAWSG-PAISELLKQFIAHNRMMTGGF--AINGQMV 291 (994)
T ss_pred cChhHHHHHHHHHHHhc---Cchhhhcc---chhhHhHHHHhhccccch-HHHHHHHHHHHHhCcccCceE--EECCEEc
Confidence 00000000000000000 00000000 011111111000 0000 011111111111100000001 0111112
Q ss_pred CCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceE-EEecCCCcceee---c-cchhHHHHHHHhhccc
Q 037354 272 PFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKY-HEVRDGGHLILH---Y-NGMCDYFLRALLVGEE 337 (346)
Q Consensus 272 p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~-~~i~~~gH~~~~---e-~~~~~~~i~~fl~~~~ 337 (346)
.+.+|++|+|+|+|++|.++|++..+.+.+.++++++ .+++++||+.++ . ++++...|.+||++.+
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 4566777799999999999999999999999999987 688999999888 3 8889999999998754
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.85 E-value=1.3e-20 Score=140.31 Aligned_cols=144 Identities=28% Similarity=0.384 Sum_probs=111.0
Q ss_pred EEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHH
Q 037354 62 RIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYP 141 (346)
Q Consensus 62 ~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~ 141 (346)
+||++||++++...|..+.+.|++. ||.|+.+|+|++|.+... ...+++.+++. .+..+. ++++++|||+||.+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~-~~i~l~G~S~Gg~~ 74 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQ-GYAVVAFDYPGHGDSDGA--DAVERVLADIR--AGYPDP-DRIILIGHSMGGAI 74 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHT-TEEEEEESCTTSTTSHHS--HHHHHHHHHHH--HHHCTC-CEEEEEEETHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHC-CCEEEEEecCCCCccchh--HHHHHHHHHHH--hhcCCC-CcEEEEEEccCcHH
Confidence 6899999999999999999999988 999999999999988321 13333333332 112355 79999999999999
Q ss_pred HHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCc
Q 037354 142 TWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFS 221 (346)
Q Consensus 142 a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (346)
++.++.+. .+++++|++++.+. .
T Consensus 75 a~~~~~~~-~~v~~~v~~~~~~~--------~------------------------------------------------ 97 (145)
T PF12695_consen 75 AANLAARN-PRVKAVVLLSPYPD--------S------------------------------------------------ 97 (145)
T ss_dssp HHHHHHHS-TTESEEEEESESSG--------C------------------------------------------------
T ss_pred HHHHhhhc-cceeEEEEecCccc--------h------------------------------------------------
Confidence 99999987 78999999998310 0
Q ss_pred cccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHH
Q 037354 222 DRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISR 301 (346)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~ 301 (346)
+ .+.....| +++++|++|..++.+..+.+.+
T Consensus 98 ----~--------------------------------------~~~~~~~p-------v~~i~g~~D~~~~~~~~~~~~~ 128 (145)
T PF12695_consen 98 ----E--------------------------------------DLAKIRIP-------VLFIHGENDPLVPPEQVRRLYE 128 (145)
T ss_dssp ----H--------------------------------------HHTTTTSE-------EEEEEETT-SSSHHHHHHHHHH
T ss_pred ----h--------------------------------------hhhccCCc-------EEEEEECCCCcCCHHHHHHHHH
Confidence 0 00112234 9999999999999999999888
Q ss_pred hcC-CceEEEecCCCcc
Q 037354 302 KLS-WIKYHEVRDGGHL 317 (346)
Q Consensus 302 ~~~-~~~~~~i~~~gH~ 317 (346)
.++ +.++++++|++|+
T Consensus 129 ~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 129 ALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHCSSEEEEEETTS-TT
T ss_pred HcCCCcEEEEeCCCcCc
Confidence 886 5899999999996
No 64
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.3e-19 Score=146.49 Aligned_cols=273 Identities=14% Similarity=0.116 Sum_probs=160.2
Q ss_pred CCceEEEEEcCCCCCCCCeEEEEEcCCCCCCccccc-------chHHHH------HhcCeEEEEECCCCCC-CCCCCC--
Q 037354 43 DGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFP-------ASQELI------ESLGIYFVLYDRAGYG-ESDPNP-- 106 (346)
Q Consensus 43 ~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~-------~~~~l~------~~~g~~vi~~D~~G~G-~S~~~~-- 106 (346)
++.++.|+.+|..+......||++||+.+++..... +.+.+. +...|.||+.|..|.+ .|..+.
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 567899999999876667899999999986544331 333332 1225999999999876 443221
Q ss_pred ------------cccHHHHHHHHHHHHHHcCCCCeEE-EEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcc
Q 037354 107 ------------RRTVKSEAFDIVELADQLQLGSKFY-VIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQS 173 (346)
Q Consensus 107 ------------~~~~~~~~~~l~~~l~~l~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~ 173 (346)
..+++|+++.-..++++||+ +++. +||-||||+.++.++..||++|+++|.+++..... +
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI-~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s----~-- 186 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGI-KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLS----A-- 186 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCc-ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCC----H--
Confidence 23888999988999999999 5655 99999999999999999999999999999875430 0
Q ss_pred hhhHHHhhhhh---------------------------hhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHH
Q 037354 174 LIRTDYRRRLI---------------------------QWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIE 226 (346)
Q Consensus 174 ~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (346)
..-.|..... +....+....+..+. .++-..... ...... ....
T Consensus 187 -~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~----~rF~r~~~~---~~~~~~-~~~f 257 (368)
T COG2021 187 -QNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELD----ERFGRRLQA---DPLRGG-GVRF 257 (368)
T ss_pred -HHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHH----HHhcccccc---cccCCC-chhH
Confidence 0011111000 001111111111111 111110000 000000 0001
Q ss_pred HHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCC--CCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcC
Q 037354 227 VLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGF--DPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLS 304 (346)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~ 304 (346)
..+.+................+-.+.+ ....++. ...++..-+.++++|+|++.-+.|..+|++..+.+.+.++
T Consensus 258 ~vESYL~~qg~kf~~rfDaNsYL~lt~----ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~ 333 (368)
T COG2021 258 AVESYLDYQGDKFVARFDANSYLYLTR----ALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALP 333 (368)
T ss_pred HHHHHHHHHHHHHHhccCcchHHHHHH----HHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhcc
Confidence 111111100000000000000000111 1111110 1123344467788889999999999999999999999998
Q ss_pred Cce-EEEec-CCCcceeec-cchhHHHHHHHhhc
Q 037354 305 WIK-YHEVR-DGGHLILHY-NGMCDYFLRALLVG 335 (346)
Q Consensus 305 ~~~-~~~i~-~~gH~~~~e-~~~~~~~i~~fl~~ 335 (346)
.+. +++|+ ..||..++. .+.+...|..||+.
T Consensus 334 ~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 334 AAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred ccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 776 65554 489999985 88899999999975
No 65
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.85 E-value=3.3e-20 Score=137.26 Aligned_cols=224 Identities=15% Similarity=0.150 Sum_probs=158.4
Q ss_pred CccccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHH
Q 037354 32 GLVDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVK 111 (346)
Q Consensus 32 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 111 (346)
.|.+...+.+.|..+++....-+.+ +.|+++++||..++....-+.+.-+-.+.+.+|+.+++||+|+|+..+. -+
T Consensus 52 ~pye~i~l~T~D~vtL~a~~~~~E~--S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps--E~ 127 (300)
T KOG4391|consen 52 MPYERIELRTRDKVTLDAYLMLSES--SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS--EE 127 (300)
T ss_pred CCceEEEEEcCcceeEeeeeecccC--CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcc--cc
Confidence 3555667778899999877766544 8999999999999999888888888888899999999999999987552 22
Q ss_pred HHHHHHHHHHHHc------CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhh
Q 037354 112 SEAFDIVELADQL------QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQ 185 (346)
Q Consensus 112 ~~~~~l~~~l~~l------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (346)
.+.-|-.++++++ +. .++++.|.|+||.+|+.+|++..+++.++|+-+.+.+. +.....
T Consensus 128 GL~lDs~avldyl~t~~~~dk-tkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI-----p~~~i~--------- 192 (300)
T KOG4391|consen 128 GLKLDSEAVLDYLMTRPDLDK-TKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI-----PHMAIP--------- 192 (300)
T ss_pred ceeccHHHHHHHHhcCccCCc-ceEEEEecccCCeeEEEeeccchhheeeeeeechhccc-----hhhhhh---------
Confidence 2222333333333 33 58999999999999999999999999999999987532 110000
Q ss_pred hHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCC
Q 037354 186 WSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFD 265 (346)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (346)
.+++.. ...+.. ...++....
T Consensus 193 -------------------~v~p~~--------------~k~i~~---------------lc~kn~~~S----------- 213 (300)
T KOG4391|consen 193 -------------------LVFPFP--------------MKYIPL---------------LCYKNKWLS----------- 213 (300)
T ss_pred -------------------eeccch--------------hhHHHH---------------HHHHhhhcc-----------
Confidence 000000 000000 000000000
Q ss_pred CCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcC--CceEEEecCCCcceeeccchhHHHHHHHhhccc
Q 037354 266 PVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLS--WIKYHEVRDGGHLILHYNGMCDYFLRALLVGEE 337 (346)
Q Consensus 266 ~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~~~~~~~i~~fl~~~~ 337 (346)
...| .+-.+|.|++.|.+|.++|+...+.+.+..| +.++..+|++.|.-.+--+-..++|.+||.+..
T Consensus 214 ~~ki----~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 214 YRKI----GQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVV 283 (300)
T ss_pred hhhh----ccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhc
Confidence 0111 1233449999999999999999999999986 468999999999888777889999999998753
No 66
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.84 E-value=2.8e-19 Score=132.23 Aligned_cols=219 Identities=17% Similarity=0.133 Sum_probs=141.1
Q ss_pred CCeEEEEEcCCCCCCcc--cccchHHHHHhcCeEEEEECCCCCCCCCCCCcc-cHHHHHHHHHHHHHHcCCCCe--EEEE
Q 037354 59 SNYRIVLVHGFGSSKEM--NFPASQELIESLGIYFVLYDRAGYGESDPNPRR-TVKSEAFDIVELADQLQLGSK--FYVI 133 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~l~~~l~~l~~~~~--~~lv 133 (346)
+...+|++||+-++... ...++..+.+. ||.++.+|++|.|.|+..-.+ .....|+|+..++.++.-..+ -+++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~-gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKE-GISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhc-CceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEE
Confidence 45699999999887643 33555666655 999999999999999876554 666777999999998853123 4688
Q ss_pred EEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHH-HhhchhhhHHHHhhhcCCCccc
Q 037354 134 GVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWI-AKHIPGLLYWWISQKVVPSTSV 212 (346)
Q Consensus 134 GhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 212 (346)
|||-||.+++.+|.++.+ ++.+|.+++.... ...+ .+..+..+.+...+.+......
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl---------------------~~~I~eRlg~~~l~~ike~Gfid~~~r 168 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRYDL---------------------KNGINERLGEDYLERIKEQGFIDVGPR 168 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEcccccch---------------------hcchhhhhcccHHHHHHhCCceecCcc
Confidence 999999999999999988 7777776664210 0001 0111122222222233322111
Q ss_pred ccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCc
Q 037354 213 LERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVP 292 (346)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~ 292 (346)
...... ......+...+..+.... ++--..+||||-++|..|.+||
T Consensus 169 kG~y~~----------------------rvt~eSlmdrLntd~h~a------------clkId~~C~VLTvhGs~D~IVP 214 (269)
T KOG4667|consen 169 KGKYGY----------------------RVTEESLMDRLNTDIHEA------------CLKIDKQCRVLTVHGSEDEIVP 214 (269)
T ss_pred cCCcCc----------------------eecHHHHHHHHhchhhhh------------hcCcCccCceEEEeccCCceee
Confidence 000000 111222222222222111 1111245669999999999999
Q ss_pred hhHHHHHHHhcCCceEEEecCCCcceeeccchhHHHHHHHhh
Q 037354 293 FQLQRFISRKLSWIKYHEVRDGGHLILHYNGMCDYFLRALLV 334 (346)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~~~~~~~i~~fl~ 334 (346)
.+.++++++.+|+-++.++||+.|.......+.......|..
T Consensus 215 ve~AkefAk~i~nH~L~iIEgADHnyt~~q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 215 VEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQLVSLGLEFIK 256 (269)
T ss_pred chhHHHHHHhccCCceEEecCCCcCccchhhhHhhhcceeEE
Confidence 999999999999999999999999987755555555555543
No 67
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.83 E-value=3e-19 Score=140.99 Aligned_cols=259 Identities=16% Similarity=0.132 Sum_probs=147.6
Q ss_pred ceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcc-cccc-----hHHHHHhcCeEEEEECCCCCCCC--CCCCcc
Q 037354 37 ARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEM-NFPA-----SQELIESLGIYFVLYDRAGYGES--DPNPRR 108 (346)
Q Consensus 37 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~-~~~~-----~~~l~~~~g~~vi~~D~~G~G~S--~~~~~~ 108 (346)
+.+++.-| .+++...|++++ .+|++|-.|..|.+... |..+ +..+.+ ++.++-+|.||+..- .-+.++
T Consensus 2 h~v~t~~G-~v~V~v~G~~~~-~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~--~f~i~Hi~aPGqe~ga~~~p~~y 77 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPKG-NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ--NFCIYHIDAPGQEEGAATLPEGY 77 (283)
T ss_dssp EEEEETTE-EEEEEEESS--T-TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT--TSEEEEEE-TTTSTT-----TT-
T ss_pred ceeccCce-EEEEEEEecCCC-CCceEEEeccccccchHHHHHHhcchhHHHHhh--ceEEEEEeCCCCCCCcccccccc
Confidence 45667556 899999998743 58999999999988766 5543 344554 588999999999643 333443
Q ss_pred ---cHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhh-
Q 037354 109 ---TVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLI- 184 (346)
Q Consensus 109 ---~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~- 184 (346)
|+++++++|.++++++++ +.++.+|.-.|+.|..++|..||++|.|+||+++.+. ...|.+...
T Consensus 78 ~yPsmd~LAe~l~~Vl~~f~l-k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~-----------~~gw~Ew~~~ 145 (283)
T PF03096_consen 78 QYPSMDQLAEMLPEVLDHFGL-KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCT-----------AAGWMEWFYQ 145 (283)
T ss_dssp ----HHHHHCTHHHHHHHHT----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S--------------HHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCCc-cEEEEEeeccchhhhhhccccCccceeEEEEEecCCC-----------CccHHHHHHH
Confidence 999999999999999999 7999999999999999999999999999999999753 122222221
Q ss_pred ---hhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhc-CCCCcchhhhhhhhHHHHhhhhhhhhcC
Q 037354 185 ---QWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTK-GFPMLTQDKLQDRSVFYALRGDVVAAFG 260 (346)
Q Consensus 185 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (346)
.+........+.....+....|-... ... .....+.++... .... ......+..++..
T Consensus 146 K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~-~~~------n~Dlv~~yr~~l~~~~N----p~Nl~~f~~sy~~------- 207 (283)
T PF03096_consen 146 KLSSWLLYSYGMTSSVKDYLLWHYFGKEE-EEN------NSDLVQTYRQHLDERIN----PKNLALFLNSYNS------- 207 (283)
T ss_dssp HHH-------CTTS-HHHHHHHHHS-HHH-HHC------T-HHHHHHHHHHHT-TT----HHHHHHHHHHHHT-------
T ss_pred HHhcccccccccccchHHhhhhccccccc-ccc------cHHHHHHHHHHHhcCCC----HHHHHHHHHHHhc-------
Confidence 11111112222222222222221111 000 001111111111 1111 1111222222211
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc--CCceEEEecCCCcceeec-cchhHHHHHHHhhcc
Q 037354 261 DWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL--SWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGE 336 (346)
Q Consensus 261 ~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 336 (346)
..+|....+...||+|++.|+..+.. +.+..+.+.+ .+.++..++++|=.+..| |+.+++.+.-||+..
T Consensus 208 -----R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 208 -----RTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp ----------SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred -----cccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 12344444555688999999999876 4556777777 356899999999999998 999999999999864
No 68
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.82 E-value=5.8e-18 Score=131.56 Aligned_cols=267 Identities=15% Similarity=0.125 Sum_probs=169.5
Q ss_pred cccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcc-cc-----cchHHHHHhcCeEEEEECCCCCC--CCCCC
Q 037354 34 VDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEM-NF-----PASQELIESLGIYFVLYDRAGYG--ESDPN 105 (346)
Q Consensus 34 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~-~~-----~~~~~l~~~~g~~vi~~D~~G~G--~S~~~ 105 (346)
.+++.+.+..| .+++...|++++ .+|++|-.|..+.+... |. +-+..+.++ +.|+.+|.|||- ...-+
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~-~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~--fcv~HV~~PGqe~gAp~~p 97 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKG-NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH--FCVYHVDAPGQEDGAPSFP 97 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCC-CCceEEEecccccchHhHhHHhhcCHhHHHHHhh--eEEEecCCCccccCCccCC
Confidence 46677888676 799999999865 68889999999988765 44 344566665 889999999994 33334
Q ss_pred Ccc---cHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhh
Q 037354 106 PRR---TVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRR 182 (346)
Q Consensus 106 ~~~---~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 182 (346)
.++ |+++++++|..+++++++ +.++.+|.-.|+.|..++|..||++|.+|||+++.+. ...|.++
T Consensus 98 ~~y~yPsmd~LAd~l~~VL~~f~l-k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~-----------a~gwiew 165 (326)
T KOG2931|consen 98 EGYPYPSMDDLADMLPEVLDHFGL-KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC-----------AKGWIEW 165 (326)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCc-ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC-----------CchHHHH
Confidence 443 999999999999999999 7999999999999999999999999999999998652 1112222
Q ss_pred hh-hhHHHH---HhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhh
Q 037354 183 LI-QWSLWI---AKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAA 258 (346)
Q Consensus 183 ~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (346)
.. ++.... ...........+.. .|..... ....+.++.+........+......+...+....
T Consensus 166 ~~~K~~s~~l~~~Gmt~~~~d~ll~H-~Fg~e~~---------~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~--- 232 (326)
T KOG2931|consen 166 AYNKVSSNLLYYYGMTQGVKDYLLAH-HFGKEEL---------GNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRR--- 232 (326)
T ss_pred HHHHHHHHHHHhhchhhhHHHHHHHH-Hhccccc---------cccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCC---
Confidence 11 111100 01111111111111 1111100 0112222222211111011111222222222110
Q ss_pred cCCCCCCCC-CCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc--CCceEEEecCCCcceeec-cchhHHHHHHHhh
Q 037354 259 FGDWGFDPV-RLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL--SWIKYHEVRDGGHLILHY-NGMCDYFLRALLV 334 (346)
Q Consensus 259 ~~~~~~~~~-~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 334 (346)
++. ....+...++||+|++.|++.+.+ +.+-.+...+ .+.++..+.++|-.+..+ |..+++.+.-|++
T Consensus 233 ------DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 233 ------DLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred ------CccccCCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 111 111222256788999999998876 4555566665 357899999999999997 9999999999998
Q ss_pred ccc
Q 037354 335 GEE 337 (346)
Q Consensus 335 ~~~ 337 (346)
...
T Consensus 305 G~G 307 (326)
T KOG2931|consen 305 GMG 307 (326)
T ss_pred cCC
Confidence 753
No 69
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.81 E-value=4e-19 Score=142.82 Aligned_cols=123 Identities=11% Similarity=0.104 Sum_probs=92.7
Q ss_pred eeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCc----ccccchHHHHHhcCeEEEEECCCCCCCCCCCC-cccHHH
Q 037354 38 RIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKE----MNFPASQELIESLGIYFVLYDRAGYGESDPNP-RRTVKS 112 (346)
Q Consensus 38 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~----~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~ 112 (346)
+++...|..+.+.. .+...+.+++|||+||++.... .|..+++.|++. ||.|+++|+||||.|.... ..+++.
T Consensus 4 ~l~~~~g~~~~~~~-~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~-Gy~Vl~~Dl~G~G~S~g~~~~~~~~~ 81 (266)
T TIGR03101 4 FLDAPHGFRFCLYH-PPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAG-GFGVLQIDLYGCGDSAGDFAAARWDV 81 (266)
T ss_pred EecCCCCcEEEEEe-cCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCccccCCHHH
Confidence 34554554444333 3332234689999999987533 455667788765 9999999999999997543 347788
Q ss_pred HHHHHHHHH---HHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 113 EAFDIVELA---DQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 113 ~~~~l~~~l---~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
+++|+.+++ ++.+. ++++++||||||.+++.++.++|++++++|+++|..
T Consensus 82 ~~~Dv~~ai~~L~~~~~-~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 82 WKEDVAAAYRWLIEQGH-PPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 888877654 44455 699999999999999999999999999999999864
No 70
>PRK11460 putative hydrolase; Provisional
Probab=99.80 E-value=3.8e-18 Score=136.25 Aligned_cols=172 Identities=18% Similarity=0.119 Sum_probs=115.5
Q ss_pred CCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCC------------Ccc---cHHHHHHHHHH---
Q 037354 58 ESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPN------------PRR---TVKSEAFDIVE--- 119 (346)
Q Consensus 58 ~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~------------~~~---~~~~~~~~l~~--- 119 (346)
+..++||++||++++...|..+.+.|... ++.+..++.+|...+... ... ++.+..+.+.+
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~-~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPA-FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHH-CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999876 344455555554322110 001 12222233333
Q ss_pred -HHHHcCCC-CeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhh
Q 037354 120 -LADQLQLG-SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGL 197 (346)
Q Consensus 120 -~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (346)
+.+..++. ++++++|||+||.+++.++..+|+.+.+++.+++... .
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~-------~------------------------- 140 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA-------S------------------------- 140 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc-------c-------------------------
Confidence 33344432 5799999999999999999999988888877765210 0
Q ss_pred hHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCC
Q 037354 198 LYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNE 277 (346)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~ 277 (346)
.. . ......|
T Consensus 141 ----------------------~~-----------~--------------------------------~~~~~~p----- 150 (232)
T PRK11460 141 ----------------------LP-----------E--------------------------------TAPTATT----- 150 (232)
T ss_pred ----------------------cc-----------c--------------------------------cccCCCc-----
Confidence 00 0 0011234
Q ss_pred CcEEEEecCCCCCCchhHHHHHHHhcC----CceEEEecCCCcceeec-cchhHHHHHHHhh
Q 037354 278 SSVHIWQGYEDKVVPFQLQRFISRKLS----WIKYHEVRDGGHLILHY-NGMCDYFLRALLV 334 (346)
Q Consensus 278 ~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 334 (346)
+++++|++|.++|.+.++.+.+.+. ++++++++++||.+..+ .+.+.+.+.++|.
T Consensus 151 --vli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 151 --IHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred --EEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 9999999999999999877777663 56889999999998765 5656666666553
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.80 E-value=2.1e-17 Score=135.85 Aligned_cols=120 Identities=15% Similarity=0.150 Sum_probs=90.0
Q ss_pred CCceEEEEEcCCCC--CCCCeEEEEEcCCCCCCccccc--chHHHHHhcCeEEEEECC--CCCCCCCCC-----------
Q 037354 43 DGRYLAYREKGVSK--IESNYRIVLVHGFGSSKEMNFP--ASQELIESLGIYFVLYDR--AGYGESDPN----------- 105 (346)
Q Consensus 43 ~g~~l~~~~~g~~~--~~~~~~vl~lhG~~~~~~~~~~--~~~~l~~~~g~~vi~~D~--~G~G~S~~~----------- 105 (346)
-+..+.|..+.++. .++.|+|+|+||++++...|.. .+..++++.|+.|+++|. +|+|.+...
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~ 102 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGF 102 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccc
Confidence 56677888877643 2357899999999999888853 345677667999999998 555543210
Q ss_pred ----------CcccHH-HHHHHHHHHHHH---cCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 106 ----------PRRTVK-SEAFDIVELADQ---LQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 106 ----------~~~~~~-~~~~~l~~~l~~---l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
..+... .+++++..+++. ++. ++++++||||||.+++.++.++|+.+++++++++..
T Consensus 103 ~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 103 YVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDG-ERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred cccCCcCcccccchHHHHHHHHHHHHHHhhCCCCC-CceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 012223 346778777776 344 589999999999999999999999999999999874
No 72
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=5.5e-18 Score=129.51 Aligned_cols=220 Identities=15% Similarity=0.084 Sum_probs=150.2
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCC-CcccHHHHHHHHHHHHHH-cCCCCeEEEEEEc
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPN-PRRTVKSEAFDIVELADQ-LQLGSKFYVIGVS 136 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~~l~~~l~~-l~~~~~~~lvGhS 136 (346)
.+..++++|-.|+++..|..+...|... +.++++.+||+|.--.. .-.+++++++.|...+.. +.- +++.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~--iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d-~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPAD--IELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLD-APFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCch--hheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCC-CCeeecccc
Confidence 5678999999999999999998888764 77999999999977443 356999999999888873 333 699999999
Q ss_pred cChHHHHHhHhhccC---ceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccc
Q 037354 137 IGSYPTWSCLKYIPH---RLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVL 213 (346)
Q Consensus 137 ~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (346)
|||++|.++|.+.-. ...++.+.++..+. ..
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~-------~~--------------------------------------- 116 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPH-------YD--------------------------------------- 116 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCC-------Cc---------------------------------------
Confidence 999999999976532 35666666654320 00
Q ss_pred cCCCccCccccHHHHhhhcCCCCcch----hhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCC
Q 037354 214 ERNPVYFSDRDIEVLKTTKGFPMLTQ----DKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDK 289 (346)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~ 289 (346)
.........+.+.++.+........ +.-....+...++.|+..... +.+. +-..+.||+.++.|++|.
T Consensus 117 -~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~-Y~~~------~~~pl~~pi~~~~G~~D~ 188 (244)
T COG3208 117 -RGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALES-YRYP------PPAPLACPIHAFGGEKDH 188 (244)
T ss_pred -ccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcc-cccC------CCCCcCcceEEeccCcch
Confidence 0111111222333333222221111 122233334445544443321 1111 113466669999999999
Q ss_pred CCchhHHHHHHHhcC-CceEEEecCCCcceeec-cchhHHHHHHHhhcc
Q 037354 290 VVPFQLQRFISRKLS-WIKYHEVRDGGHLILHY-NGMCDYFLRALLVGE 336 (346)
Q Consensus 290 ~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 336 (346)
.+..+....|.+... ..++.+++| |||...+ .+++...|.+.+...
T Consensus 189 ~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 189 EVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLAHH 236 (244)
T ss_pred hccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhhhh
Confidence 999999998998886 689999995 9999998 889999999888643
No 73
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.79 E-value=3.6e-17 Score=130.27 Aligned_cols=275 Identities=13% Similarity=0.088 Sum_probs=145.7
Q ss_pred CCccccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcc-cc-cchHHHHHhcCeEEEEECCCCCCCCCCCC-c
Q 037354 31 DGLVDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEM-NF-PASQELIESLGIYFVLYDRAGYGESDPNP-R 107 (346)
Q Consensus 31 ~~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~-~~-~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~ 107 (346)
....+...+.+++|..+......++....+|.||++||+.+++.. |. .++..+.++ ||.|+++++|||+.+.... .
T Consensus 46 ~~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~r-g~~~Vv~~~Rgcs~~~n~~p~ 124 (345)
T COG0429 46 KVAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRR-GWLVVVFHFRGCSGEANTSPR 124 (345)
T ss_pred ccccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhc-CCeEEEEecccccCCcccCcc
Confidence 344566688888887776666666665678999999999776543 33 455666655 9999999999999887532 2
Q ss_pred ccHHHHHHHHHHHHHHc---CCCCeEEEEEEccChHHHHHhHhhccC--ceeeeEEecccCCCCCCCCCcchhhHHHhhh
Q 037354 108 RTVKSEAFDIVELADQL---QLGSKFYVIGVSIGSYPTWSCLKYIPH--RLAGVALIVPTINYEWPSLPQSLIRTDYRRR 182 (346)
Q Consensus 108 ~~~~~~~~~l~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 182 (346)
..-.-+.+|+..+++.+ ....++..+|.|+||.+...+.....+ .+.+.+.++.+.+. ......+..
T Consensus 125 ~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl-------~~~~~~l~~- 196 (345)
T COG0429 125 LYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL-------EACAYRLDS- 196 (345)
T ss_pred eecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH-------HHHHHHhcC-
Confidence 22222225555555444 333699999999999554444443333 45666666554321 000000000
Q ss_pred hhhhH-HHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchh-hhhhhhH--HHHhhhhhhhh
Q 037354 183 LIQWS-LWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQD-KLQDRSV--FYALRGDVVAA 258 (346)
Q Consensus 183 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~ 258 (346)
.+. .-........+......+.-.. .........+.++.+..-...... .....++ ...+++.
T Consensus 197 --~~s~~ly~r~l~~~L~~~~~~kl~~l-------~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~---- 263 (345)
T COG0429 197 --GFSLRLYSRYLLRNLKRNAARKLKEL-------EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQ---- 263 (345)
T ss_pred --chhhhhhHHHHHHHHHHHHHHHHHhc-------CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHh----
Confidence 000 0000000000000000000000 000110001111111110000000 0000011 0111110
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHH-hcCCceEEEecCCCcceeec-cc-----hhHHHHHH
Q 037354 259 FGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISR-KLSWIKYHEVRDGGHLILHY-NG-----MCDYFLRA 331 (346)
Q Consensus 259 ~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e-~~-----~~~~~i~~ 331 (346)
.+-..-+++|.+|+|+|++.+|++++++....... ..|++.+..-+.+||..++. .. -..+.|.+
T Consensus 264 --------aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~ 335 (345)
T COG0429 264 --------ASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILD 335 (345)
T ss_pred --------ccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHH
Confidence 11123466777779999999999999988866655 66899999999999999885 22 45677778
Q ss_pred Hhhc
Q 037354 332 LLVG 335 (346)
Q Consensus 332 fl~~ 335 (346)
||+.
T Consensus 336 ~l~~ 339 (345)
T COG0429 336 WLDP 339 (345)
T ss_pred HHHH
Confidence 8764
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.78 E-value=5.5e-17 Score=133.64 Aligned_cols=120 Identities=19% Similarity=0.177 Sum_probs=85.3
Q ss_pred CCceEEEEEcCCCC--CCCCeEEEEEcCCCCCCcccccc--hHHHHHhcCeEEEEECCCCCC-----CCCC---------
Q 037354 43 DGRYLAYREKGVSK--IESNYRIVLVHGFGSSKEMNFPA--SQELIESLGIYFVLYDRAGYG-----ESDP--------- 104 (346)
Q Consensus 43 ~g~~l~~~~~g~~~--~~~~~~vl~lhG~~~~~~~~~~~--~~~l~~~~g~~vi~~D~~G~G-----~S~~--------- 104 (346)
-|..+.|..+-++. ....|+|+|+||++++...|... +..+....|+.|+.+|..++| .+..
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~ 107 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGF 107 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcce
Confidence 46788888775542 23568999999999888766432 234444569999999988766 1110
Q ss_pred ------C-----C--cccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 105 ------N-----P--RRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 105 ------~-----~--~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
. . .+-.+++.+.+....+.++. ++++++||||||..++.++.++|+++++++++++..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~-~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 108 YLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDT-SRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred eeccccCCCcccchhhhHHHHHHHHHHHHHHhcCC-CceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 0 0 11233444445555555677 689999999999999999999999999999999864
No 75
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.77 E-value=1.2e-16 Score=131.99 Aligned_cols=132 Identities=15% Similarity=0.138 Sum_probs=90.4
Q ss_pred CCCCccccceeecCCCceEEEEEcCCCCC------CCCeEEEEEcCCCCCCcc-cc-cchHHHHHhcCeEEEEECCCCCC
Q 037354 29 NGDGLVDAARIRLSDGRYLAYREKGVSKI------ESNYRIVLVHGFGSSKEM-NF-PASQELIESLGIYFVLYDRAGYG 100 (346)
Q Consensus 29 ~~~~~~~~~~~~~~~g~~l~~~~~g~~~~------~~~~~vl~lhG~~~~~~~-~~-~~~~~l~~~~g~~vi~~D~~G~G 100 (346)
......++..++++||..+.+....++.. ...|+||++||+.+++.. |- .++.++.+ .||+|++++.||+|
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~-~G~r~VVfN~RG~~ 166 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQR-KGYRVVVFNHRGLG 166 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHh-CCcEEEEECCCCCC
Confidence 34456678899999999999877644432 356999999999877654 32 34444444 49999999999999
Q ss_pred CCCCCCc-c----cHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccC---ceeeeEEeccc
Q 037354 101 ESDPNPR-R----TVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPH---RLAGVALIVPT 162 (346)
Q Consensus 101 ~S~~~~~-~----~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lil~~~~ 162 (346)
.|.-... . ..+|+.+.+..+.+..-. .+...+|.||||.+.+.|..+..+ .+.++++.+|+
T Consensus 167 g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~-a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 167 GSKLTTPRLFTAGWTEDLREVVNHIKKRYPQ-APLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred CCccCCCceeecCCHHHHHHHHHHHHHhCCC-CceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 9975432 2 344444444433344444 689999999999999999887554 34444444443
No 76
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.75 E-value=3.6e-16 Score=121.99 Aligned_cols=113 Identities=25% Similarity=0.231 Sum_probs=97.1
Q ss_pred EEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc--ccHHHHHHHHHHHHHHcC
Q 037354 48 AYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR--RTVKSEAFDIVELADQLQ 125 (346)
Q Consensus 48 ~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~l~ 125 (346)
-|.+..+. +.+..+||-+||.+++...|..+...|.+. |+|+|.+++||+|.++..+. ++-.+-..-+.++++.++
T Consensus 24 ~y~D~~~~-gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~-~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~ 101 (297)
T PF06342_consen 24 VYEDSLPS-GSPLGTVVAFHGSPGSHNDFKYIRPPLDEA-GIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELG 101 (297)
T ss_pred EEEecCCC-CCCceeEEEecCCCCCccchhhhhhHHHHc-CeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcC
Confidence 34444332 224569999999999999999998888876 99999999999999987664 588899999999999999
Q ss_pred CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 126 LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 126 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
+.++++.+|||.|+-.|+.++..+| +.++++++|...
T Consensus 102 i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 102 IKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred CCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 9889999999999999999999985 679999999764
No 77
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.73 E-value=3.3e-16 Score=142.38 Aligned_cols=231 Identities=16% Similarity=0.106 Sum_probs=145.9
Q ss_pred ccccceeecCCCceEEEEEcCCCCCCC---CeEEEEEcCCCCCCcc--cccchHHHHHhcCeEEEEECCCCCCCCCC---
Q 037354 33 LVDAARIRLSDGRYLAYREKGVSKIES---NYRIVLVHGFGSSKEM--NFPASQELIESLGIYFVLYDRAGYGESDP--- 104 (346)
Q Consensus 33 ~~~~~~~~~~~g~~l~~~~~g~~~~~~---~~~vl~lhG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~G~S~~--- 104 (346)
..+.-.+...||.+++.+...+.+... -|+||++||.+..... |....+.|+.+ ||.|+.+++||.+.-..
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~-G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASA-GYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcC-CeEEEEeCCCCCCccHHHHH
Confidence 346667788899999999987765322 2899999999866554 44566777766 99999999997654211
Q ss_pred ------CCcccHHHHHHHHHHHHHHcCC--CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhh
Q 037354 105 ------NPRRTVKSEAFDIVELADQLQL--GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIR 176 (346)
Q Consensus 105 ------~~~~~~~~~~~~l~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 176 (346)
......+|+.+.+. ++...+. ++++.++|||+||.+++..+...| ++++.+...+..+.
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~----------- 509 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDW----------- 509 (620)
T ss_pred HhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchh-----------
Confidence 11235666666666 5555543 258999999999999999999877 77777776665321
Q ss_pred HHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhh
Q 037354 177 TDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVV 256 (346)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (346)
.......... +. ............ .. ..+....
T Consensus 510 ----------~~~~~~~~~~---------~~------------------~~~~~~~~~~~~------~~---~~~~~~s- 542 (620)
T COG1506 510 ----------LLYFGESTEG---------LR------------------FDPEENGGGPPE------DR---EKYEDRS- 542 (620)
T ss_pred ----------hhhccccchh---------hc------------------CCHHHhCCCccc------Ch---HHHHhcC-
Confidence 0000000000 00 000000000000 00 0000000
Q ss_pred hhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc----CCceEEEecCCCcceee-c-cchhHHHHH
Q 037354 257 AAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL----SWIKYHEVRDGGHLILH-Y-NGMCDYFLR 330 (346)
Q Consensus 257 ~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~-e-~~~~~~~i~ 330 (346)
.+ .-..++++|+|+|||++|..||.+.+..+.+.+ -+++++++|+.+|.+.. + ...+.+.+.
T Consensus 543 -----------p~-~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~ 610 (620)
T COG1506 543 -----------PI-FYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEIL 610 (620)
T ss_pred -----------hh-hhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHH
Confidence 00 112334555999999999999999887777666 35789999999999887 4 666777888
Q ss_pred HHhhcc
Q 037354 331 ALLVGE 336 (346)
Q Consensus 331 ~fl~~~ 336 (346)
+|+++.
T Consensus 611 ~~~~~~ 616 (620)
T COG1506 611 DWFKRH 616 (620)
T ss_pred HHHHHH
Confidence 888764
No 78
>PLN00021 chlorophyllase
Probab=99.72 E-value=2.4e-16 Score=130.36 Aligned_cols=116 Identities=12% Similarity=0.029 Sum_probs=83.2
Q ss_pred eEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcc-cHHHHHHHHHHHHHH-
Q 037354 46 YLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRR-TVKSEAFDIVELADQ- 123 (346)
Q Consensus 46 ~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~l~~~l~~- 123 (346)
.+.+..+-+......|+|||+||++.+...|..++++|+++ ||.|+++|++|++.+...... +..+..+++.+.++.
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~-G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~ 116 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASH-GFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAV 116 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHHhC-CCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhh
Confidence 34444444433346799999999999999999999999876 999999999987543221111 233333444433322
Q ss_pred ------cCCCCeEEEEEEccChHHHHHhHhhccC-----ceeeeEEecccC
Q 037354 124 ------LQLGSKFYVIGVSIGSYPTWSCLKYIPH-----RLAGVALIVPTI 163 (346)
Q Consensus 124 ------l~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lil~~~~~ 163 (346)
.+. ++++++||||||.+++.+|..+++ +++++|+++|..
T Consensus 117 l~~~~~~d~-~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 117 LPEGVRPDL-SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred cccccccCh-hheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 234 589999999999999999998874 689999999863
No 79
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.72 E-value=9.6e-16 Score=132.81 Aligned_cols=250 Identities=8% Similarity=-0.007 Sum_probs=143.3
Q ss_pred CCeEEEEEcCCCCCCcccc-----cchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHc----CCCCe
Q 037354 59 SNYRIVLVHGFGSSKEMNF-----PASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQL----QLGSK 129 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~-----~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l----~~~~~ 129 (346)
-+.|||+++++-...+.++ .+++.|.++ ||.|+.+|+++-+.++ ...+++++++.+.+.++.+ |. ++
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~q-G~~VflIsW~nP~~~~--r~~~ldDYv~~i~~Ald~V~~~tG~-~~ 289 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKN-QLQVFIISWRNPDKAH--REWGLSTYVDALKEAVDAVRAITGS-RD 289 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHc-CCeEEEEeCCCCChhh--cCCCHHHHHHHHHHHHHHHHHhcCC-CC
Confidence 4689999999998887775 677888877 9999999999877664 3457888887777776655 45 68
Q ss_pred EEEEEEccChHHHHH----hHhhccC-ceeeeEEecccCCCCCCC-CCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHh
Q 037354 130 FYVIGVSIGSYPTWS----CLKYIPH-RLAGVALIVPTINYEWPS-LPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWIS 203 (346)
Q Consensus 130 ~~lvGhS~Gg~~a~~----~a~~~p~-~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (346)
+.++|||+||.++.. +++++++ +|++++++.+..++..++ .........+. ........ ....+.......+
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~-~~e~~~~~-~G~lpg~~ma~~F 367 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLE-AAKRRSYQ-AGVLDGSEMAKVF 367 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHH-HHHHHHHh-cCCcCHHHHHHHH
Confidence 999999999999986 7888886 899999999988764432 11111111110 00000000 0111110000000
Q ss_pred hhcCCCcccccC-CCcc-C-ccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhc-CCCCCCCCCCCCCCCCCCCc
Q 037354 204 QKVVPSTSVLER-NPVY-F-SDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAF-GDWGFDPVRLSNPFPHNESS 279 (346)
Q Consensus 204 ~~~~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~p~~~i~~P 279 (346)
..+-+....... ...+ . .......+..+..+........... +.. +..+-.... ..+ ....-..-+.+|+||
T Consensus 368 ~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e-~l~-ly~~N~L~~pG~l--~v~G~~idL~~I~~P 443 (560)
T TIGR01839 368 AWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGD-LLD-MFKSNPLTRPDAL--EVCGTPIDLKKVKCD 443 (560)
T ss_pred HhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHH-HHH-HHhcCCCCCCCCE--EECCEEechhcCCCC
Confidence 000000000000 0000 0 0000111334444444433333333 222 221111111 111 223344456677777
Q ss_pred EEEEecCCCCCCchhHHHHHHHhcC-CceEEEecCCCccee
Q 037354 280 VHIWQGYEDKVVPFQLQRFISRKLS-WIKYHEVRDGGHLIL 319 (346)
Q Consensus 280 vlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~ 319 (346)
++++.|+.|.++|.+.+..+.+.+. +.+++..+ +||..-
T Consensus 444 vl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHIgg 483 (560)
T TIGR01839 444 SFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHIQS 483 (560)
T ss_pred eEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCcccc
Confidence 9999999999999999999888885 45666665 699653
No 80
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.70 E-value=7.3e-16 Score=128.50 Aligned_cols=241 Identities=17% Similarity=0.220 Sum_probs=131.3
Q ss_pred CCccccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchH-HHHHhcCeEEEEECCCCCCCCCCCC-cc
Q 037354 31 DGLVDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQ-ELIESLGIYFVLYDRAGYGESDPNP-RR 108 (346)
Q Consensus 31 ~~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~-~l~~~~g~~vi~~D~~G~G~S~~~~-~~ 108 (346)
..+.+...|.. .|.+|......+...++.|+||++.|+.+....+..++. .+..+ |+.++++|.||.|.|...+ ..
T Consensus 162 ~~~i~~v~iP~-eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~r-GiA~LtvDmPG~G~s~~~~l~~ 239 (411)
T PF06500_consen 162 DYPIEEVEIPF-EGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPR-GIAMLTVDMPGQGESPKWPLTQ 239 (411)
T ss_dssp SSEEEEEEEEE-TTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHC-T-EEEEE--TTSGGGTTT-S-S
T ss_pred CCCcEEEEEee-CCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhC-CCEEEEEccCCCcccccCCCCc
Confidence 34556667777 456666655555554567888888888888777655544 45555 9999999999999986432 23
Q ss_pred cHHHHHHHHHHHHHHcC---CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhh
Q 037354 109 TVKSEAFDIVELADQLQ---LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQ 185 (346)
Q Consensus 109 ~~~~~~~~l~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (346)
+.+.+...+.+.+.... . .+|.++|.|+||.+|.++|..+++|++++|..++.... ......+..
T Consensus 240 D~~~l~~aVLd~L~~~p~VD~-~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~-------~ft~~~~~~---- 307 (411)
T PF06500_consen 240 DSSRLHQAVLDYLASRPWVDH-TRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHH-------FFTDPEWQQ---- 307 (411)
T ss_dssp -CCHHHHHHHHHHHHSTTEEE-EEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SC-------GGH-HHHHT----
T ss_pred CHHHHHHHHHHHHhcCCccCh-hheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhh-------hhccHHHHh----
Confidence 44455556666665543 3 59999999999999999999889999999999997532 111111100
Q ss_pred hHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCC
Q 037354 186 WSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFD 265 (346)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (346)
..|... .+.+..-....... .. .+... ...|.+.
T Consensus 308 -------~~P~my--------------------------~d~LA~rlG~~~~~-----~~----~l~~e----l~~~SLk 341 (411)
T PF06500_consen 308 -------RVPDMY--------------------------LDVLASRLGMAAVS-----DE----SLRGE----LNKFSLK 341 (411)
T ss_dssp -------TS-HHH--------------------------HHHHHHHCT-SCE------HH----HHHHH----GGGGSTT
T ss_pred -------cCCHHH--------------------------HHHHHHHhCCccCC-----HH----HHHHH----HHhcCcc
Confidence 001100 01111111110000 00 00000 0111111
Q ss_pred CCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCC-cceeeccchhHHHHHHHhhc
Q 037354 266 PVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGG-HLILHYNGMCDYFLRALLVG 335 (346)
Q Consensus 266 ~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~g-H~~~~e~~~~~~~i~~fl~~ 335 (346)
...+-. -.+..+|+|.+.|++|+++|.+..+.++..-.+.+...++... |..+ +.-...+.+||++
T Consensus 342 ~qGlL~-~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~~gy---~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 342 TQGLLS-GRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLHMGY---PQALDEIYKWLED 408 (411)
T ss_dssp TTTTTT-SS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHHHHH---HHHHHHHHHHHHH
T ss_pred hhcccc-CCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCccccch---HHHHHHHHHHHHH
Confidence 111110 1344566999999999999999999988887778888887644 4333 3556677777764
No 81
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.69 E-value=4.1e-16 Score=123.72 Aligned_cols=188 Identities=14% Similarity=0.042 Sum_probs=110.6
Q ss_pred cchHHHHHhcCeEEEEECCCCCCCCCCC-----C----cccHHHHHHHHHHHHHHc--CCCCeEEEEEEccChHHHHHhH
Q 037354 78 PASQELIESLGIYFVLYDRAGYGESDPN-----P----RRTVKSEAFDIVELADQL--QLGSKFYVIGVSIGSYPTWSCL 146 (346)
Q Consensus 78 ~~~~~l~~~~g~~vi~~D~~G~G~S~~~-----~----~~~~~~~~~~l~~~l~~l--~~~~~~~lvGhS~Gg~~a~~~a 146 (346)
.....|+++ ||.|+.+|+||.+..... . ...++|..+.+..+++.- +. +++.++|+|+||.+++.++
T Consensus 5 ~~~~~la~~-Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~-~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 5 WNAQLLASQ-GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDP-DRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp HHHHHHHTT-T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEE-EEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhC-CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccc-eeEEEEcccccccccchhh
Confidence 334555555 999999999998754211 1 114444444444444442 33 6999999999999999999
Q ss_pred hhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHH
Q 037354 147 KYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIE 226 (346)
Q Consensus 147 ~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (346)
..+|+++++++..++..+.... ......+. ..
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~----~~~~~~~~--------------------------------------------~~ 114 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSY----YGTTDIYT--------------------------------------------KA 114 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCS----BHHTCCHH--------------------------------------------HG
T ss_pred cccceeeeeeeccceecchhcc----cccccccc--------------------------------------------cc
Confidence 9999999999999987542100 00000000 00
Q ss_pred HHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc---
Q 037354 227 VLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL--- 303 (346)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--- 303 (346)
....... ... ....+....... ...++. +++|+|+++|++|..||.+.+..+.+.+
T Consensus 115 ~~~~~~~-~~~------~~~~~~~~s~~~---------~~~~~~-----~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~ 173 (213)
T PF00326_consen 115 EYLEYGD-PWD------NPEFYRELSPIS---------PADNVQ-----IKPPVLIIHGENDPRVPPSQSLRLYNALRKA 173 (213)
T ss_dssp HHHHHSS-TTT------SHHHHHHHHHGG---------GGGGCG-----GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT
T ss_pred cccccCc-cch------hhhhhhhhcccc---------cccccc-----CCCCEEEEccCCCCccCHHHHHHHHHHHHhc
Confidence 0000000 000 000000000000 011100 4455999999999999999887777666
Q ss_pred -CCceEEEecCCCcceee-c-cchhHHHHHHHhhcc
Q 037354 304 -SWIKYHEVRDGGHLILH-Y-NGMCDYFLRALLVGE 336 (346)
Q Consensus 304 -~~~~~~~i~~~gH~~~~-e-~~~~~~~i~~fl~~~ 336 (346)
.+++++++|++||.... + .....+.+.+||++.
T Consensus 174 g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 174 GKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp TSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 35899999999996664 4 667888899998764
No 82
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.68 E-value=2.9e-15 Score=118.46 Aligned_cols=105 Identities=19% Similarity=0.161 Sum_probs=74.1
Q ss_pred CCeEEEEEcCCCCCCcccc--cchHHHHHhcCeEEEEECCCCCCCCCCCCc-----------ccHHHHHHHHHHHHHHcC
Q 037354 59 SNYRIVLVHGFGSSKEMNF--PASQELIESLGIYFVLYDRAGYGESDPNPR-----------RTVKSEAFDIVELADQLQ 125 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~--~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-----------~~~~~~~~~l~~~l~~l~ 125 (346)
..|+||++||.+++...+. .-...++++.||.|+++|++|++.+..... ....++.+.+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 5789999999998876654 123456666799999999999875432100 012222222333333333
Q ss_pred CC-CeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 126 LG-SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 126 ~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
++ ++++++|||+||.+++.++..+|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 32 589999999999999999999999999999888753
No 83
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.67 E-value=4.9e-16 Score=132.30 Aligned_cols=105 Identities=13% Similarity=0.182 Sum_probs=81.2
Q ss_pred CCeEEEEEcCCCCCC--ccccc-chHHHHHh-cCeEEEEECCCCCCCCCCCC-cccHHHHHHHHHHHHHHc------CCC
Q 037354 59 SNYRIVLVHGFGSSK--EMNFP-ASQELIES-LGIYFVLYDRAGYGESDPNP-RRTVKSEAFDIVELADQL------QLG 127 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~--~~~~~-~~~~l~~~-~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~l------~~~ 127 (346)
++|++|++||++.+. ..|.. +...|... ..|+||++|++|+|.|..+. ......+++++.++++.+ ++
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l- 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW- 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC-
Confidence 578999999998764 23543 34444422 25899999999999886543 234566777777777754 35
Q ss_pred CeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 128 SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 128 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
++++||||||||.+|..++.++|++|.++++++|...
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 6999999999999999999999999999999999754
No 84
>PRK10162 acetyl esterase; Provisional
Probab=99.66 E-value=3.9e-14 Score=118.77 Aligned_cols=126 Identities=15% Similarity=0.093 Sum_probs=87.9
Q ss_pred ceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCC---CCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc-ccHHH
Q 037354 37 ARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFG---SSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR-RTVKS 112 (346)
Q Consensus 37 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~---~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-~~~~~ 112 (346)
..+...+| .+..+.+.+.. ...|+||++||.+ ++...|..+...|+...|+.|+++|+|......-+.. .+..+
T Consensus 60 ~~i~~~~g-~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~ 137 (318)
T PRK10162 60 YMVPTPYG-QVETRLYYPQP-DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVA 137 (318)
T ss_pred EEEecCCC-ceEEEEECCCC-CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHH
Confidence 34444455 46666665432 3468999999977 5556777888889887799999999997654432221 13444
Q ss_pred HHHHHHHHHHHcCCC-CeEEEEEEccChHHHHHhHhhc------cCceeeeEEecccCC
Q 037354 113 EAFDIVELADQLQLG-SKFYVIGVSIGSYPTWSCLKYI------PHRLAGVALIVPTIN 164 (346)
Q Consensus 113 ~~~~l~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lil~~~~~~ 164 (346)
..+.+.+..+.++++ ++++++|+|+||.+++.++... +.++.+++++.|...
T Consensus 138 a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 138 VCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 444555555566542 5899999999999999988653 357899999988653
No 85
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.64 E-value=6.5e-16 Score=126.17 Aligned_cols=122 Identities=16% Similarity=0.135 Sum_probs=88.3
Q ss_pred eeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCC-ccccc-chHHHHHhcCeEEEEECCCCCCCCCCCC-cccHHHHH
Q 037354 38 RIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSK-EMNFP-ASQELIESLGIYFVLYDRAGYGESDPNP-RRTVKSEA 114 (346)
Q Consensus 38 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~-~~~~~-~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~ 114 (346)
.+...++..+.+..+.+ .+|++|++||+.++. ..|.. +...+....+|+|+++|+++++.+..+. ..+...++
T Consensus 18 ~~~~~~~~~~~~~~f~~----~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~ 93 (275)
T cd00707 18 LLFADDPSSLKNSNFNP----SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVG 93 (275)
T ss_pred EecCCChhhhhhcCCCC----CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHH
Confidence 44443455666666654 578999999999887 56654 3444554447999999999984332111 12455556
Q ss_pred HHHHHHHHHc------CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 115 FDIVELADQL------QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 115 ~~l~~~l~~l------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
+++.++++.+ +. +++++|||||||.+|..++.++|++|.++++++|...
T Consensus 94 ~~la~~l~~L~~~~g~~~-~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 94 AELAKFLDFLVDNTGLSL-ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHHHHHHHHHHHhcCCCh-HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 6666666554 34 6899999999999999999999999999999998754
No 86
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.64 E-value=1.2e-14 Score=122.43 Aligned_cols=265 Identities=11% Similarity=0.051 Sum_probs=151.2
Q ss_pred CeEEEEEcCCCCCCcccc-cchHHHHHhcCeEEEEECCCCCCCCCC-CCcccHHHHHHHHHHHHHHcCCCCeEEEEEEcc
Q 037354 60 NYRIVLVHGFGSSKEMNF-PASQELIESLGIYFVLYDRAGYGESDP-NPRRTVKSEAFDIVELADQLQLGSKFYVIGVSI 137 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~-~~~~~l~~~~g~~vi~~D~~G~G~S~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~ 137 (346)
.|+||++..+.+...... .+++.|.+ |+.|+..||..-+..+. ...++++|+++-|.++++++|. + ++++|+|+
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~--g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~-~-v~l~GvCq 177 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP--DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGP-D-IHVIAVCQ 177 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC--CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCC-C-CcEEEEch
Confidence 379999999987665543 56677776 79999999987775542 2356999999999999999986 4 99999999
Q ss_pred ChHHHHHhHhhc-----cCceeeeEEecccCCCCCCCCCcchhhHHHhh-hhhhhHHH-HHh------------hchhhh
Q 037354 138 GSYPTWSCLKYI-----PHRLAGVALIVPTINYEWPSLPQSLIRTDYRR-RLIQWSLW-IAK------------HIPGLL 198 (346)
Q Consensus 138 Gg~~a~~~a~~~-----p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~------------~~~~~~ 198 (346)
||..++.+++.+ |+++++++++++..++... +.. ...+.. ....+... ... ..|..+
T Consensus 178 gG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~--p~~--v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~ 253 (406)
T TIGR01849 178 PAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARAS--PTV--VNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFL 253 (406)
T ss_pred hhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCC--Cch--HHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHH
Confidence 999977766654 6679999999998875321 111 111110 00011111 100 111111
Q ss_pred HHHHhhhcCCCc--c-cccCCCccC--ccc---cHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCC
Q 037354 199 YWWISQKVVPST--S-VLERNPVYF--SDR---DIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLS 270 (346)
Q Consensus 199 ~~~~~~~~~~~~--~-~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 270 (346)
....+...-+.. . ......... ... +...+..+.............+.+...+. +.......+ ....-.
T Consensus 254 ~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~-~n~L~~G~l--~v~G~~ 330 (406)
T TIGR01849 254 QLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQ-QFLLPQGKF--IVEGKR 330 (406)
T ss_pred HHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHH-hCCccCCcE--EECCEE
Confidence 111100000000 0 000000000 000 11111121122222122222222222222 211112222 122233
Q ss_pred CCCCCCC-CcEEEEecCCCCCCchhHHHHHHHhc---C--CceEEEecCCCcceeec----cchhHHHHHHHhhc
Q 037354 271 NPFPHNE-SSVHIWQGYEDKVVPFQLQRFISRKL---S--WIKYHEVRDGGHLILHY----NGMCDYFLRALLVG 335 (346)
Q Consensus 271 ~p~~~i~-~Pvlii~G~~D~~~~~~~~~~~~~~~---~--~~~~~~i~~~gH~~~~e----~~~~~~~i~~fl~~ 335 (346)
..+.+|+ +|+|.+.|++|.++|+..++.+.+.+ + +.+.+..+++||+...- .+++...|.+||.+
T Consensus 331 Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 331 VDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 4455666 77999999999999999998888874 4 34577777899998873 78899999999975
No 87
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.64 E-value=5.3e-15 Score=117.29 Aligned_cols=178 Identities=23% Similarity=0.268 Sum_probs=102.6
Q ss_pred CCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCC------CCCC--CC-------CC----cccHHHHHHH
Q 037354 56 KIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAG------YGES--DP-------NP----RRTVKSEAFD 116 (346)
Q Consensus 56 ~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G------~G~S--~~-------~~----~~~~~~~~~~ 116 (346)
+.+..++|||+||+|.+...|..........-+..++++.-|- .|.. .. .. ...+.+.++.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 3347899999999999996655443311112256677765431 1220 10 01 1134444455
Q ss_pred HHHHHHHc---CC-CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHh
Q 037354 117 IVELADQL---QL-GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAK 192 (346)
Q Consensus 117 l~~~l~~l---~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
+.++++.. ++ .++++++|+|.||.+++.++.++|+.+.++|.+++.... ..
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~-------~~------------------ 144 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP-------ES------------------ 144 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT-------GC------------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc-------cc------------------
Confidence 55555432 22 268999999999999999999999999999999986310 00
Q ss_pred hchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCC
Q 037354 193 HIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNP 272 (346)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p 272 (346)
.. .. ......
T Consensus 145 --------------------------~~-----------~~-------------------------------~~~~~~-- 154 (216)
T PF02230_consen 145 --------------------------EL-----------ED-------------------------------RPEALA-- 154 (216)
T ss_dssp --------------------------CC-----------HC-------------------------------CHCCCC--
T ss_pred --------------------------cc-----------cc-------------------------------cccccC--
Confidence 00 00 000011
Q ss_pred CCCCCCcEEEEecCCCCCCchhHHHHHHHhc----CCceEEEecCCCcceeeccchhHHHHHHHhhc
Q 037354 273 FPHNESSVHIWQGYEDKVVPFQLQRFISRKL----SWIKYHEVRDGGHLILHYNGMCDYFLRALLVG 335 (346)
Q Consensus 273 ~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~~~~~~~i~~fl~~ 335 (346)
++|+++++|++|+++|.+..+...+.+ .+++++.+++.||.... +..+.+.+||++
T Consensus 155 ----~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~---~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 ----KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISP---EELRDLREFLEK 214 (216)
T ss_dssp ----TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--H---HHHHHHHHHHHH
T ss_pred ----CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH---HHHHHHHHHHhh
Confidence 344999999999999988876666555 45789999999997753 455566677654
No 88
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.63 E-value=4.9e-15 Score=111.36 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=101.5
Q ss_pred EEEEcCCCCCC-cccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHH
Q 037354 63 IVLVHGFGSSK-EMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYP 141 (346)
Q Consensus 63 vl~lhG~~~~~-~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~ 141 (346)
|+++||++++. ..|.++.+.-.+.. ++|-.+|+ ...+.++|.+.+.+.+...+ +++++||||+|+..
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~---------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHSLGc~~ 68 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW---------DNPDLDEWVQALDQAIDAID--EPTILVAHSLGCLT 68 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-----------TS--HHHHHHHHHHCCHC-T--TTEEEEEETHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc---------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeCHHHHH
Confidence 68999998874 56776655555543 67777666 22378888888888888764 57999999999999
Q ss_pred HHHhH-hhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccC
Q 037354 142 TWSCL-KYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYF 220 (346)
Q Consensus 142 a~~~a-~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (346)
+++++ .....+|.+++|++|+-.. ... ...+
T Consensus 69 ~l~~l~~~~~~~v~g~lLVAp~~~~------~~~------------------------------~~~~------------ 100 (171)
T PF06821_consen 69 ALRWLAEQSQKKVAGALLVAPFDPD------DPE------------------------------PFPP------------ 100 (171)
T ss_dssp HHHHHHHTCCSSEEEEEEES--SCG------CHH------------------------------CCTC------------
T ss_pred HHHHHhhcccccccEEEEEcCCCcc------ccc------------------------------chhh------------
Confidence 99999 7778899999999996210 000 0000
Q ss_pred ccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHH
Q 037354 221 SDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFIS 300 (346)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~ 300 (346)
.... ....|...+..|.++|.+++|+++|.+.++.++
T Consensus 101 ------~~~~-------------------------------------f~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A 137 (171)
T PF06821_consen 101 ------ELDG-------------------------------------FTPLPRDPLPFPSIVIASDNDPYVPFERAQRLA 137 (171)
T ss_dssp ------GGCC-------------------------------------CTTSHCCHHHCCEEEEEETTBSSS-HHHHHHHH
T ss_pred ------hccc-------------------------------------cccCcccccCCCeEEEEcCCCCccCHHHHHHHH
Confidence 0000 000111112223899999999999999999999
Q ss_pred HhcCCceEEEecCCCcceeec
Q 037354 301 RKLSWIKYHEVRDGGHLILHY 321 (346)
Q Consensus 301 ~~~~~~~~~~i~~~gH~~~~e 321 (346)
+.+ +++++.++++||+.--+
T Consensus 138 ~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 138 QRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHH-T-EEEEETS-TTSSGGG
T ss_pred HHc-CCCeEECCCCCCccccc
Confidence 998 89999999999998765
No 89
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.63 E-value=2.8e-14 Score=104.43 Aligned_cols=172 Identities=15% Similarity=0.104 Sum_probs=119.0
Q ss_pred CCCeEEEEEcCCCCCCccc-----ccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHH--HHHHHHHHHHcCCCCe-
Q 037354 58 ESNYRIVLVHGFGSSKEMN-----FPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSE--AFDIVELADQLQLGSK- 129 (346)
Q Consensus 58 ~~~~~vl~lhG~~~~~~~~-----~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~--~~~l~~~l~~l~~~~~- 129 (346)
+..|..|++|.-+...... ..++..|.+. ||.++.+|+||.|+|...-+..+-+. +....+++.......+
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~-G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~ 104 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKR-GFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSAS 104 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhC-CceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchh
Confidence 4678899998765443332 2344555555 99999999999999987655433322 2233344444443223
Q ss_pred EEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCC
Q 037354 130 FYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPS 209 (346)
Q Consensus 130 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (346)
..+.|+|+|+++++.+|.+.|+ ....+.+.|.+..
T Consensus 105 ~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~-------------------------------------------- 139 (210)
T COG2945 105 CWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA-------------------------------------------- 139 (210)
T ss_pred hhhcccchHHHHHHHHHHhccc-ccceeeccCCCCc--------------------------------------------
Confidence 3688999999999999999765 5555555543210
Q ss_pred cccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCC
Q 037354 210 TSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDK 289 (346)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~ 289 (346)
. .+. .+.....| .++|+|+.|.
T Consensus 140 -------------------~--------------------dfs------------~l~P~P~~-------~lvi~g~~Dd 161 (210)
T COG2945 140 -------------------Y--------------------DFS------------FLAPCPSP-------GLVIQGDADD 161 (210)
T ss_pred -------------------h--------------------hhh------------hccCCCCC-------ceeEecChhh
Confidence 0 000 01123344 9999999999
Q ss_pred CCchhHHHHHHHhcCCceEEEecCCCcceeeccchhHHHHHHHhh
Q 037354 290 VVPFQLQRFISRKLSWIKYHEVRDGGHLILHYNGMCDYFLRALLV 334 (346)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~~~~~~~i~~fl~ 334 (346)
+++....-++++. ...+++++++++||++..-..+.+.|.+||.
T Consensus 162 vv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 162 VVDLVAVLKWQES-IKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred hhcHHHHHHhhcC-CCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 9998888888777 4678999999999999887779999999985
No 90
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.60 E-value=2.3e-15 Score=97.19 Aligned_cols=77 Identities=25% Similarity=0.341 Sum_probs=68.5
Q ss_pred CceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcc--cHHHHHHHHHHHH
Q 037354 44 GRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRR--TVKSEAFDIVELA 121 (346)
Q Consensus 44 g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~l~~~l 121 (346)
|.+|+++.|.+++. .+.+|+++||++..+..|..+++.|+++ ||.|+++|+||||+|+....+ +++++++|+..++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry~~~a~~L~~~-G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSGRYAHLAEFLAEQ-GYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHHHHHHHHHHHHhC-CCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 67899999987763 5889999999999999999999999987 999999999999999875543 8999999999887
Q ss_pred H
Q 037354 122 D 122 (346)
Q Consensus 122 ~ 122 (346)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 4
No 91
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.60 E-value=6.5e-14 Score=111.46 Aligned_cols=175 Identities=17% Similarity=0.111 Sum_probs=111.6
Q ss_pred CCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCC-CCCC--Ccc---------cHHHHHHHHHHHHHHcC
Q 037354 58 ESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGE-SDPN--PRR---------TVKSEAFDIVELADQLQ 125 (346)
Q Consensus 58 ~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~-S~~~--~~~---------~~~~~~~~l~~~l~~l~ 125 (346)
.+.|.||++|++.+-......++..|+++ ||.|+++|+-+-.. .... ... ..+...+++.+.++.+.
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 36799999999988876666788888877 99999999854333 1111 110 12355667766666552
Q ss_pred C-----CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHH
Q 037354 126 L-----GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYW 200 (346)
Q Consensus 126 ~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (346)
- .+++.++|+|+||.+++.++... +.+++.+..-|... ..
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~------~~---------------------------- 135 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP------PP---------------------------- 135 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS------GG----------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC------CC----------------------------
Confidence 1 25899999999999999999886 67898888776110 00
Q ss_pred HHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcE
Q 037354 201 WISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSV 280 (346)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pv 280 (346)
. ... ...++.+| +
T Consensus 136 ---------------------------------------------~---~~~------------~~~~~~~P-------~ 148 (218)
T PF01738_consen 136 ---------------------------------------------P---PLE------------DAPKIKAP-------V 148 (218)
T ss_dssp ---------------------------------------------G---HHH------------HGGG--S--------E
T ss_pred ---------------------------------------------c---chh------------hhcccCCC-------E
Confidence 0 000 01134556 9
Q ss_pred EEEecCCCCCCchhHHHHHHHhc----CCceEEEecCCCcceeec--c-------chhHHHHHHHhhc
Q 037354 281 HIWQGYEDKVVPFQLQRFISRKL----SWIKYHEVRDGGHLILHY--N-------GMCDYFLRALLVG 335 (346)
Q Consensus 281 lii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e--~-------~~~~~~i~~fl~~ 335 (346)
++++|++|+.++.+..+.+.+.+ ...++++++|++|.+... + ++..+.+.+||++
T Consensus 149 l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 149 LILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp EEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred eecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999999999999776666555 578999999999988774 2 2345566677664
No 92
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.57 E-value=1.5e-14 Score=130.32 Aligned_cols=123 Identities=19% Similarity=0.115 Sum_probs=95.5
Q ss_pred ecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCc---ccc-cchHHHHHhcCeEEEEECCCCCCCCCCCCcc-cHHHHH
Q 037354 40 RLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKE---MNF-PASQELIESLGIYFVLYDRAGYGESDPNPRR-TVKSEA 114 (346)
Q Consensus 40 ~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~---~~~-~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~ 114 (346)
++.||.+|++..+.+...++.|+||++||++.... .+. .....|+++ ||.|+++|+||+|.|+..... + ...+
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~-Gy~vv~~D~RG~g~S~g~~~~~~-~~~~ 79 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQ-GYAVVIQDTRGRGASEGEFDLLG-SDEA 79 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhC-CcEEEEEeccccccCCCceEecC-cccc
Confidence 45689999988776544346799999999997653 232 234556655 999999999999999864322 3 5677
Q ss_pred HHHHHHHHHcCC----CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 115 FDIVELADQLQL----GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 115 ~~l~~~l~~l~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
+|+.++++.+.. +.++.++|||+||.+++.+|..+|++++++|..++..+
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 788888877632 24899999999999999999999999999999888654
No 93
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.57 E-value=4.6e-13 Score=108.75 Aligned_cols=105 Identities=26% Similarity=0.305 Sum_probs=89.8
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHh--cCeEEEEECCCCCCCCCCC-------CcccHHHHHHHHHHHHHHcC-----
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIES--LGIYFVLYDRAGYGESDPN-------PRRTVKSEAFDIVELADQLQ----- 125 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~--~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~l~~~l~~l~----- 125 (346)
+..+||++|.+|-...|..++..|.+. .++.|++....||-.++.. ..+++++.++...++++.+-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 468999999999999999999999876 3799999999999777654 24699999998888776652
Q ss_pred CCCeEEEEEEccChHHHHHhHhhcc---CceeeeEEecccCC
Q 037354 126 LGSKFYVIGVSIGSYPTWSCLKYIP---HRLAGVALIVPTIN 164 (346)
Q Consensus 126 ~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lil~~~~~~ 164 (346)
.+.+++++|||.|++++++++.+.+ .+|.+++++-|...
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 3368999999999999999999999 78999999999864
No 94
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.57 E-value=5.6e-13 Score=112.27 Aligned_cols=133 Identities=17% Similarity=0.172 Sum_probs=103.0
Q ss_pred CCCCccccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCccccc-----chHHHHHhcCeEEEEECCCCCCCCC
Q 037354 29 NGDGLVDAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFP-----ASQELIESLGIYFVLYDRAGYGESD 103 (346)
Q Consensus 29 ~~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~-----~~~~l~~~~g~~vi~~D~~G~G~S~ 103 (346)
...++.+.+.+++.||.-+.......+. .++|+|++.||+.+++..|-. -+..+..+.||.|..-+.||.-.|.
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~lhRIp~~~-~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr 121 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTLHRIPRGK-KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSR 121 (403)
T ss_pred HcCCceEEEEEEccCCeEEEEeeecCCC-CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccch
Confidence 3456788999999999877776664443 578999999999999999963 2344455559999999999987764
Q ss_pred CC--------C---cccHHHHHH-HHHHHHHHc----CCCCeEEEEEEccChHHHHHhHhhccC---ceeeeEEecccC
Q 037354 104 PN--------P---RRTVKSEAF-DIVELADQL----QLGSKFYVIGVSIGSYPTWSCLKYIPH---RLAGVALIVPTI 163 (346)
Q Consensus 104 ~~--------~---~~~~~~~~~-~l~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lil~~~~~ 163 (346)
+. . ++|+++++. ||-+.+++. +. ++++.||||.|+...+.++...|+ +|+.+++++|..
T Consensus 122 ~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~-~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 122 KHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQ-EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccc-cceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 21 1 237777665 666666554 55 699999999999999998888765 799999999986
No 95
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.56 E-value=3.5e-14 Score=114.14 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=83.5
Q ss_pred eEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChH
Q 037354 61 YRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSY 140 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ 140 (346)
++|+|+|+.+++...|.++++.+... .+.|+.++.+|.+.. .+...+++++++...+.|.......++.|+|||+||.
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~-~~~v~~i~~~~~~~~-~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~ 78 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDD-VIGVYGIEYPGRGDD-EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGI 78 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTT-EEEEEEECSTTSCTT-SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCC-eEEEEEEecCCCCCC-CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHH
Confidence 48999999999999999999999885 477999999999822 2234599999999888887766534999999999999
Q ss_pred HHHHhHhhc---cCceeeeEEecccC
Q 037354 141 PTWSCLKYI---PHRLAGVALIVPTI 163 (346)
Q Consensus 141 ~a~~~a~~~---p~~v~~lil~~~~~ 163 (346)
+|+++|.+- ...|..++++++.+
T Consensus 79 lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 79 LAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHhhhccCceEEecCCC
Confidence 999999753 44699999999754
No 96
>COG0400 Predicted esterase [General function prediction only]
Probab=99.55 E-value=1.2e-13 Score=106.07 Aligned_cols=104 Identities=21% Similarity=0.222 Sum_probs=70.4
Q ss_pred CCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECC--CCCCCCCCC-----Ccc-------cHHHHHHHHHHHHHH
Q 037354 58 ESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDR--AGYGESDPN-----PRR-------TVKSEAFDIVELADQ 123 (346)
Q Consensus 58 ~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~--~G~G~S~~~-----~~~-------~~~~~~~~l~~~l~~ 123 (346)
+..|+||++||+|++...+.++...+..+ +.++.+-= +-.|.-... ..+ ..+.+++-+..+.+.
T Consensus 16 p~~~~iilLHG~Ggde~~~~~~~~~~~P~--~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVPLPELILPN--ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCcEEEEEecCCCChhhhhhhhhhcCCC--CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 35778999999999988887765555554 44443311 111111000 011 334445555555566
Q ss_pred cCCC-CeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 124 LQLG-SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 124 l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
.+++ ++++++|+|-||++++.+..++|+.++++|++++..
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 6652 589999999999999999999999999999999864
No 97
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.54 E-value=1.2e-12 Score=104.09 Aligned_cols=195 Identities=14% Similarity=0.062 Sum_probs=137.0
Q ss_pred ceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCC-CCCCCCCc--------
Q 037354 37 ARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGY-GESDPNPR-------- 107 (346)
Q Consensus 37 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S~~~~~-------- 107 (346)
..+...+ .++.-...-+......|.||++|+..+-....+...++|+.. ||.|+++|+-+. |.+.....
T Consensus 5 v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~-Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~ 82 (236)
T COG0412 5 VTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKA-GYVVLAPDLYGRQGDPTDIEDEPAELETG 82 (236)
T ss_pred eEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhC-CcEEEechhhccCCCCCcccccHHHHhhh
Confidence 3455534 556655554443334489999999999988899999999988 999999998763 33322110
Q ss_pred ----ccHHHHHHHHHHHHHHcC-----CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHH
Q 037354 108 ----RTVKSEAFDIVELADQLQ-----LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTD 178 (346)
Q Consensus 108 ----~~~~~~~~~l~~~l~~l~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 178 (346)
.+..+...|+.+.++.|. ..+++.++|+||||.+++.++...| .|++.+..-+.... .
T Consensus 83 ~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~------~------ 149 (236)
T COG0412 83 LVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA------D------ 149 (236)
T ss_pred hhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC------C------
Confidence 123677778888877763 1258999999999999999999877 78888877765210 0
Q ss_pred HhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhh
Q 037354 179 YRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAA 258 (346)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (346)
. .
T Consensus 150 ------------------------------~----------~-------------------------------------- 151 (236)
T COG0412 150 ------------------------------D----------T-------------------------------------- 151 (236)
T ss_pred ------------------------------c----------c--------------------------------------
Confidence 0 0
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcC----CceEEEecCCCcceeec------------c
Q 037354 259 FGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLS----WIKYHEVRDGGHLILHY------------N 322 (346)
Q Consensus 259 ~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e------------~ 322 (346)
.+..++.+| +|++.|+.|..+|......+.+.+. +.++.+++++.|.++.+ .
T Consensus 152 -----~~~~~~~~p-------vl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa 219 (236)
T COG0412 152 -----ADAPKIKVP-------VLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAA 219 (236)
T ss_pred -----cccccccCc-------EEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHH
Confidence 001134455 9999999999999887777666652 57899999998987732 3
Q ss_pred chhHHHHHHHhhcc
Q 037354 323 GMCDYFLRALLVGE 336 (346)
Q Consensus 323 ~~~~~~i~~fl~~~ 336 (346)
+...+.+.+||++.
T Consensus 220 ~~a~~~~~~ff~~~ 233 (236)
T COG0412 220 EDAWQRVLAFFKRL 233 (236)
T ss_pred HHHHHHHHHHHHHh
Confidence 34566777777654
No 98
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.53 E-value=1.9e-13 Score=102.87 Aligned_cols=257 Identities=13% Similarity=0.108 Sum_probs=142.5
Q ss_pred ceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC----cccHHH
Q 037354 37 ARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP----RRTVKS 112 (346)
Q Consensus 37 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~----~~~~~~ 112 (346)
..+...||..+....+.... +....|+.-.+.+.....|++++....++ ||.|+.+|+||.|.|.+.. .+++.|
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-~~~g~~~va~a~Gv~~~fYRrfA~~a~~~-Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~D 85 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-KASGRLVVAGATGVGQYFYRRFAAAAAKA-GFEVLTFDYRGIGQSRPASLSGSQWRYLD 85 (281)
T ss_pred cccccCCCccCccccccCCC-CCCCcEEecccCCcchhHhHHHHHHhhcc-CceEEEEecccccCCCccccccCccchhh
Confidence 34666799999888886543 12335666666777777777787777666 9999999999999998643 246667
Q ss_pred HHH-HHHHHHHHcC---CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHH
Q 037354 113 EAF-DIVELADQLQ---LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSL 188 (346)
Q Consensus 113 ~~~-~l~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (346)
++. |+.+.++.++ .+.+.+.||||+||.+.-.+... + ++.+....+.... +...+....-.. ..
T Consensus 86 wA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~-~-k~~a~~vfG~gag-----wsg~m~~~~~l~-----~~ 153 (281)
T COG4757 86 WARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQH-P-KYAAFAVFGSGAG-----WSGWMGLRERLG-----AV 153 (281)
T ss_pred hhhcchHHHHHHHHhhCCCCceEEeeccccceeecccccC-c-ccceeeEeccccc-----cccchhhhhccc-----ce
Confidence 765 6666655543 23689999999999976655554 5 5555555554432 111110000000 00
Q ss_pred HHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCC
Q 037354 189 WIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVR 268 (346)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (346)
.+-......+.++. ..++.... ...+.++.......+++...+...........
T Consensus 154 ~l~~lv~p~lt~w~--g~~p~~l~--G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~---------------------- 207 (281)
T COG4757 154 LLWNLVGPPLTFWK--GYMPKDLL--GLGSDLPGTVMRDWARWCRHPRYYFDDPAMRN---------------------- 207 (281)
T ss_pred eeccccccchhhcc--ccCcHhhc--CCCccCcchHHHHHHHHhcCccccccChhHhH----------------------
Confidence 00000000000000 01111000 01111222222333344433322111111111
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceE--EEecC----CCcceeec-c-chhHHHHHHHh
Q 037354 269 LSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKY--HEVRD----GGHLILHY-N-GMCDYFLRALL 333 (346)
Q Consensus 269 i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~--~~i~~----~gH~~~~e-~-~~~~~~i~~fl 333 (346)
+..-+..+.+|++.+...+|+.+|+...+.+.+..+|+.+ ..++. .||+.... + |.+.+.+.+|+
T Consensus 208 ~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 208 YRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 1111222344499999999999999999999999887654 44443 59998885 5 77777777765
No 99
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.53 E-value=1.2e-12 Score=108.74 Aligned_cols=232 Identities=17% Similarity=0.058 Sum_probs=122.3
Q ss_pred cceeecCCCceEEEEEcCCC-CCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCC-CCCC--------
Q 037354 36 AARIRLSDGRYLAYREKGVS-KIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGE-SDPN-------- 105 (346)
Q Consensus 36 ~~~~~~~~g~~l~~~~~g~~-~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~-S~~~-------- 105 (346)
.-++...+|.+++....-+. ..++-|.||.+||.++....|...+ .++.. ||.|+++|.||+|. |...
T Consensus 58 ~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~-G~~vl~~d~rGqg~~~~d~~~~~~~~~ 135 (320)
T PF05448_consen 58 DVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLL-PWAAA-GYAVLAMDVRGQGGRSPDYRGSSGGTL 135 (320)
T ss_dssp EEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHH-HHHHT-T-EEEEE--TTTSSSS-B-SSBSSS-S
T ss_pred EEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccccc-ccccC-CeEEEEecCCCCCCCCCCccccCCCCC
Confidence 33455567888887776555 3446689999999999877665443 34444 99999999999993 3110
Q ss_pred C------------cccHHHHHHHHHHHHHHcC----C-CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCC
Q 037354 106 P------------RRTVKSEAFDIVELADQLQ----L-GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWP 168 (346)
Q Consensus 106 ~------------~~~~~~~~~~l~~~l~~l~----~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~ 168 (346)
. .+-+..+..|....++.+. + ++++.+.|.|+||.+++.+|+.. ++|++++...|...-
T Consensus 136 ~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd-~rv~~~~~~vP~l~d--- 211 (320)
T PF05448_consen 136 KGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD-PRVKAAAADVPFLCD--- 211 (320)
T ss_dssp SSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-ST-SEEEEESESSSS---
T ss_pred ccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC-ccccEEEecCCCccc---
Confidence 0 0112334455554444431 1 26899999999999999999985 469999999886421
Q ss_pred CCCcchhhHHHhhhhhhhHHHHHh-hchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhH
Q 037354 169 SLPQSLIRTDYRRRLIQWSLWIAK-HIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSV 247 (346)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (346)
.. ....+.. ..+. ..-...++....... .....
T Consensus 212 ----~~-----------~~~~~~~~~~~y-------------------------~~~~~~~~~~d~~~~------~~~~v 245 (320)
T PF05448_consen 212 ----FR-----------RALELRADEGPY-------------------------PEIRRYFRWRDPHHE------REPEV 245 (320)
T ss_dssp ----HH-----------HHHHHT--STTT-------------------------HHHHHHHHHHSCTHC------HHHHH
T ss_pred ----hh-----------hhhhcCCccccH-------------------------HHHHHHHhccCCCcc------cHHHH
Confidence 00 0000000 0000 000000000000000 00111
Q ss_pred HHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcC-CceEEEecCCCcceeeccchh-
Q 037354 248 FYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLS-WIKYHEVRDGGHLILHYNGMC- 325 (346)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~~~~- 325 (346)
...+..- +...-.++|+||+++-.|-.|.++|+..+....+.++ ..++.+++..||... ..+
T Consensus 246 ~~~L~Y~-------------D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~---~~~~ 309 (320)
T PF05448_consen 246 FETLSYF-------------DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYG---PEFQ 309 (320)
T ss_dssp HHHHHTT--------------HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTT---HHHH
T ss_pred HHHHhhh-------------hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCch---hhHH
Confidence 1111000 0011122345559999999999999999999998885 578999999999554 333
Q ss_pred HHHHHHHhhc
Q 037354 326 DYFLRALLVG 335 (346)
Q Consensus 326 ~~~i~~fl~~ 335 (346)
.+...+||.+
T Consensus 310 ~~~~~~~l~~ 319 (320)
T PF05448_consen 310 EDKQLNFLKE 319 (320)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 5666677654
No 100
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.53 E-value=8.3e-14 Score=112.00 Aligned_cols=120 Identities=18% Similarity=0.225 Sum_probs=102.0
Q ss_pred CCceEEEEEcCCCCC---CCCeEEEEEcCCCCCCcccccchHHHHHh--------cCeEEEEECCCCCCCCCCCC--ccc
Q 037354 43 DGRYLAYREKGVSKI---ESNYRIVLVHGFGSSKEMNFPASQELIES--------LGIYFVLYDRAGYGESDPNP--RRT 109 (346)
Q Consensus 43 ~g~~l~~~~~g~~~~---~~~~~vl~lhG~~~~~~~~~~~~~~l~~~--------~g~~vi~~D~~G~G~S~~~~--~~~ 109 (346)
.|.++|+....++.. +.-.|||++|||+++-..|..+++-|.+. +-|.||++.+||+|-|+.+. +++
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn 211 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFN 211 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCcc
Confidence 799999998876632 12358999999999999988888877653 34889999999999999765 468
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 110 VKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 110 ~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
....|.-+..++-.+|. +++.+-|-.+|+.|+..+|..+|++|.|+-+-.+..
T Consensus 212 ~~a~ArvmrkLMlRLg~-nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 212 AAATARVMRKLMLRLGY-NKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred HHHHHHHHHHHHHHhCc-ceeEeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 88999999999999999 799999999999999999999999999987755543
No 101
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.51 E-value=2.3e-12 Score=97.93 Aligned_cols=87 Identities=23% Similarity=0.282 Sum_probs=64.7
Q ss_pred EEEEcCCCCCCccccc--chHHHHHhc-CeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccCh
Q 037354 63 IVLVHGFGSSKEMNFP--ASQELIESL-GIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGS 139 (346)
Q Consensus 63 vl~lhG~~~~~~~~~~--~~~~l~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg 139 (346)
|+++||+.++...... +.+.+.+.. ...++++|++ .+.++..+.+.++++.... +.+.|||.||||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~----------~~p~~a~~~l~~~i~~~~~-~~~~liGSSlGG 70 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP----------PFPEEAIAQLEQLIEELKP-ENVVLIGSSLGG 70 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC----------cCHHHHHHHHHHHHHhCCC-CCeEEEEEChHH
Confidence 7999999999887662 233344331 2345666553 2567777888999998876 569999999999
Q ss_pred HHHHHhHhhccCceeeeEEecccC
Q 037354 140 YPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 140 ~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
..|..+|.+++ +++ ||++|..
T Consensus 71 ~~A~~La~~~~--~~a-vLiNPav 91 (187)
T PF05728_consen 71 FYATYLAERYG--LPA-VLINPAV 91 (187)
T ss_pred HHHHHHHHHhC--CCE-EEEcCCC
Confidence 99999999886 333 9999985
No 102
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.51 E-value=9.7e-14 Score=125.67 Aligned_cols=110 Identities=21% Similarity=0.317 Sum_probs=88.1
Q ss_pred eeecCCCceEEEEEcCCCC------CCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCC------
Q 037354 38 RIRLSDGRYLAYREKGVSK------IESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPN------ 105 (346)
Q Consensus 38 ~~~~~~g~~l~~~~~g~~~------~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~------ 105 (346)
.+...++.++.|...|.+. ....|+|||+||++++...|..+++.|.++ ||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~-Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAA-GVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhC-CcEEEEeCCCCCCccccccccccc
Confidence 5556688888888765542 123469999999999999999999999866 899999999999999432
Q ss_pred ----C--------------cccHHHHHHHHHHHHHHcC--------------C-CCeEEEEEEccChHHHHHhHhh
Q 037354 106 ----P--------------RRTVKSEAFDIVELADQLQ--------------L-GSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 106 ----~--------------~~~~~~~~~~l~~~l~~l~--------------~-~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
. +.++++.+.|+..+...++ . ..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 0 1267889999988887776 1 2489999999999999999875
No 103
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.50 E-value=1.7e-12 Score=100.29 Aligned_cols=229 Identities=16% Similarity=0.061 Sum_probs=141.4
Q ss_pred ceeecCCCceEEEEEcCCCCC-CCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCC----CC-c---
Q 037354 37 ARIRLSDGRYLAYREKGVSKI-ESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDP----NP-R--- 107 (346)
Q Consensus 37 ~~~~~~~g~~l~~~~~g~~~~-~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~----~~-~--- 107 (346)
-+++..+|.+|..+..-+... ...|.||-.||.++....|..+...-. . ||.|+.+|.||.|.|.. ++ .
T Consensus 59 vTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~-~-Gyavf~MdvRGQg~~~~dt~~~p~~~s~ 136 (321)
T COG3458 59 VTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV-A-GYAVFVMDVRGQGSSSQDTADPPGGPSD 136 (321)
T ss_pred EEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc-c-ceeEEEEecccCCCccccCCCCCCCCcC
Confidence 356666888999887766554 457899999999999988865544333 3 89999999999998732 10 0
Q ss_pred --------------ccHHHHHHHHHHHHH------HcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCC
Q 037354 108 --------------RTVKSEAFDIVELAD------QLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEW 167 (346)
Q Consensus 108 --------------~~~~~~~~~l~~~l~------~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~ 167 (346)
+-+.....|+..+++ ..+. +++.+.|.|.||.+++.+++.. .+|++++++-|..+.
T Consensus 137 pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde-~Ri~v~G~SqGGglalaaaal~-~rik~~~~~~Pfl~d-- 212 (321)
T COG3458 137 PGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDE-ERIGVTGGSQGGGLALAAAALD-PRIKAVVADYPFLSD-- 212 (321)
T ss_pred CceeEeecccCCCceEEeeehHHHHHHHHHHhccCccch-hheEEeccccCchhhhhhhhcC-hhhhccccccccccc--
Confidence 112223333333333 2344 6999999999999999988874 579999998887531
Q ss_pred CCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhH
Q 037354 168 PSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSV 247 (346)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (346)
++.. + ..........+..+.+.-... ....
T Consensus 213 --f~r~---------------------------------i----------~~~~~~~ydei~~y~k~h~~~-----e~~v 242 (321)
T COG3458 213 --FPRA---------------------------------I----------ELATEGPYDEIQTYFKRHDPK-----EAEV 242 (321)
T ss_pred --chhh---------------------------------e----------eecccCcHHHHHHHHHhcCch-----HHHH
Confidence 1000 0 000111112222222111110 0111
Q ss_pred HHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCC-ceEEEecCCCcceeeccchhH
Q 037354 248 FYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSW-IKYHEVRDGGHLILHYNGMCD 326 (346)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~~~~~ 326 (346)
..++. .-++.+-.+++++|+|+..|--|++||+..+-.+.+.++. .++.+++.-+|... |.-..
T Consensus 243 ~~TL~-------------yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~--p~~~~ 307 (321)
T COG3458 243 FETLS-------------YFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG--PGFQS 307 (321)
T ss_pred HHHHh-------------hhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC--cchhH
Confidence 11111 0123333455666699999999999999999999988865 56778887677543 44445
Q ss_pred HHHHHHhhcc
Q 037354 327 YFLRALLVGE 336 (346)
Q Consensus 327 ~~i~~fl~~~ 336 (346)
+.+..|++.+
T Consensus 308 ~~~~~~l~~l 317 (321)
T COG3458 308 RQQVHFLKIL 317 (321)
T ss_pred HHHHHHHHhh
Confidence 5566676654
No 104
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.50 E-value=1.1e-12 Score=108.05 Aligned_cols=268 Identities=12% Similarity=0.062 Sum_probs=146.4
Q ss_pred CCeEEEEEcCCCCCCcccc-----cchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHH-----HHHHHHHHHcCCCC
Q 037354 59 SNYRIVLVHGFGSSKEMNF-----PASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEA-----FDIVELADQLQLGS 128 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~-----~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~-----~~l~~~l~~l~~~~ 128 (346)
-++|+|++|.+-.....|+ .++..+.++ |..|+.+|+++-..+.. ..++++++ +.+..+.+..+. +
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~-g~~vfvIsw~nPd~~~~--~~~~edYi~e~l~~aid~v~~itg~-~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQ-GLDVFVISWRNPDASLA--AKNLEDYILEGLSEAIDTVKDITGQ-K 181 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHc-CCceEEEeccCchHhhh--hccHHHHHHHHHHHHHHHHHHHhCc-c
Confidence 3679999999998888776 455666666 99999999988776654 33555555 445555556677 7
Q ss_pred eEEEEEEccChHHHHHhHhhccCc-eeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcC
Q 037354 129 KFYVIGVSIGSYPTWSCLKYIPHR-LAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVV 207 (346)
Q Consensus 129 ~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (346)
++.++|+|.||.++..+++.++.+ |++++++.+..++..++.-...............+.... ..+.......+.-+.
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g-~lpg~~ma~~F~mLr 260 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKG-ILPGWYMAIVFFLLR 260 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhcc-CCChHHHHHHHHhcC
Confidence 999999999999999999988887 999999998887644321111111111111111111111 222111111110000
Q ss_pred CCcccccC-CCccCc---cccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEE
Q 037354 208 PSTSVLER-NPVYFS---DRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIW 283 (346)
Q Consensus 208 ~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii 283 (346)
+....... ...++. ....+.. .+..+..... ......+.+.+..+-......| .......-+.+|+||++++
T Consensus 261 pndliw~~fV~nyl~ge~pl~fdll-yWn~dst~~~-~~~~~~~Lrn~y~~N~l~~g~~--~v~G~~VdL~~It~pvy~~ 336 (445)
T COG3243 261 PNDLIWNYFVNNYLDGEQPLPFDLL-YWNADSTRLP-GAAHSEYLRNFYLENRLIRGGL--EVSGTMVDLGDITCPVYNL 336 (445)
T ss_pred ccccchHHHHHHhcCCCCCCchhHH-HhhCCCccCc-hHHHHHHHHHHHHhChhhccce--EECCEEechhhcccceEEE
Confidence 10000000 000000 0011111 1222222111 1222222222222222122222 2233344556677779999
Q ss_pred ecCCCCCCchhHHHHHHHhcCC-ceEEEecCCCcceeec--cch--------hHHHHHHHhhcc
Q 037354 284 QGYEDKVVPFQLQRFISRKLSW-IKYHEVRDGGHLILHY--NGM--------CDYFLRALLVGE 336 (346)
Q Consensus 284 ~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e--~~~--------~~~~i~~fl~~~ 336 (346)
.|++|.++|.+.+....+.+++ ++++.. ++||....= |.. ....+.+|+.+.
T Consensus 337 a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a 399 (445)
T COG3243 337 AAEEDHIAPWSSVYLGARLLGGEVTFVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGA 399 (445)
T ss_pred eecccccCCHHHHHHHHHhcCCceEEEEe-cCceEEEEeCCcchhhhhcCCCCcchHHHHHHhh
Confidence 9999999999999888888887 455555 589987662 322 223566777654
No 105
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.48 E-value=7.1e-12 Score=102.09 Aligned_cols=240 Identities=12% Similarity=0.079 Sum_probs=134.5
Q ss_pred CCCeEEEEEcCCCCCCcccc-cc-hHHHHHhcCeEEEEECCCCCCCCCCCCcc-----cHHHH----------HHHHHHH
Q 037354 58 ESNYRIVLVHGFGSSKEMNF-PA-SQELIESLGIYFVLYDRAGYGESDPNPRR-----TVKSE----------AFDIVEL 120 (346)
Q Consensus 58 ~~~~~vl~lhG~~~~~~~~~-~~-~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-----~~~~~----------~~~l~~~ 120 (346)
+.+|.+|.++|.|......+ .+ +..|.++ |+..+.+..|-||.-.+.... +..|+ +..|..+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 35789999999998765444 34 6778877 999999999999977653321 22221 1223444
Q ss_pred HHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHH
Q 037354 121 ADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYW 200 (346)
Q Consensus 121 l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (346)
++..|. .++.+.|.||||.+|...|...|..|..+-.+++.... ..+... .......|......+....
T Consensus 169 l~~~G~-~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs--~vFt~G-----vls~~i~W~~L~~q~~~~~--- 237 (348)
T PF09752_consen 169 LEREGY-GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSAS--VVFTEG-----VLSNSINWDALEKQFEDTV--- 237 (348)
T ss_pred HHhcCC-CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCC--cchhhh-----hhhcCCCHHHHHHHhcccc---
Confidence 555588 59999999999999999999999988877766664311 001111 1110011111110000000
Q ss_pred HHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcE
Q 037354 201 WISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSV 280 (346)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pv 280 (346)
+.. ....................................+. ++.+...| .-...+
T Consensus 238 ------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T------------~l~nf~~P--~dp~~i 292 (348)
T PF09752_consen 238 ------YEE-----EISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFT------------HLTNFPVP--VDPSAI 292 (348)
T ss_pred ------hhh-----hhcccccCcccccchhhccccchHHHHHHHHHHHHhhc------------cccccCCC--CCCCcE
Confidence 000 00000000000000000000000000000011111111 12233333 223338
Q ss_pred EEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceee-c-cchhHHHHHHHhhc
Q 037354 281 HIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILH-Y-NGMCDYFLRALLVG 335 (346)
Q Consensus 281 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e-~~~~~~~i~~fl~~ 335 (346)
.++.+++|..||......+.+..|++++..+++ ||..-+ - .+.|.+.|.+-+++
T Consensus 293 i~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 293 IFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred EEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhhC
Confidence 999999999999988899999999999999996 998665 3 88899999887753
No 106
>PRK10115 protease 2; Provisional
Probab=99.47 E-value=5.1e-12 Score=116.03 Aligned_cols=130 Identities=18% Similarity=0.113 Sum_probs=95.7
Q ss_pred ccccceeecCCCceEEEEE-cCCC--CCCCCeEEEEEcCCCCCCc--ccccchHHHHHhcCeEEEEECCCCCCCCCCC--
Q 037354 33 LVDAARIRLSDGRYLAYRE-KGVS--KIESNYRIVLVHGFGSSKE--MNFPASQELIESLGIYFVLYDRAGYGESDPN-- 105 (346)
Q Consensus 33 ~~~~~~~~~~~g~~l~~~~-~g~~--~~~~~~~vl~lhG~~~~~~--~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-- 105 (346)
..+...++..||.+|.+.. +.++ ...+.|.||++||..+... .|......|.++ ||.|+.++.||-|.-...
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~r-G~~v~~~n~RGs~g~G~~w~ 493 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDR-GFVYAIVHVRGGGELGQQWY 493 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHC-CcEEEEEEcCCCCccCHHHH
Confidence 3355567788999999743 3222 1235699999999877664 355556677776 999999999987654321
Q ss_pred -------CcccHHHHHHHHHHHHHHcCC--CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 106 -------PRRTVKSEAFDIVELADQLQL--GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 106 -------~~~~~~~~~~~l~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
...+++|+++.+..+++. +. .+++.+.|.|.||.++..++..+|++++++|...|..+
T Consensus 494 ~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 494 EDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 123677777777766654 32 26899999999999999999999999999999998753
No 107
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.42 E-value=5.3e-13 Score=107.00 Aligned_cols=99 Identities=18% Similarity=0.263 Sum_probs=61.0
Q ss_pred CCeEEEEEcCCCCCCcc---cccchHHHHHhcCeEEEEECCC----CCCCCCCCCcccHHHHHHHHHHHHHHc-------
Q 037354 59 SNYRIVLVHGFGSSKEM---NFPASQELIESLGIYFVLYDRA----GYGESDPNPRRTVKSEAFDIVELADQL------- 124 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~---~~~~~~~l~~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~l~~~l~~l------- 124 (346)
....||||.|++..-.. ...+++.|... +|.|+-+-++ |+|-+ ++++-++||.++++++
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~-~wsl~q~~LsSSy~G~G~~------SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEET-GWSLFQVQLSSSYSGWGTS------SLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-T-T-EEEEE--GGGBTTS-S--------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccC-CeEEEEEEecCccCCcCcc------hhhhHHHHHHHHHHHHHHhhccc
Confidence 45589999999875433 33555566444 8999988754 55544 5666677777666654
Q ss_pred -CCCCeEEEEEEccChHHHHHhHhhcc-----CceeeeEEecccCCC
Q 037354 125 -QLGSKFYVIGVSIGSYPTWSCLKYIP-----HRLAGVALIVPTINY 165 (346)
Q Consensus 125 -~~~~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lil~~~~~~~ 165 (346)
+. ++|+|+|||.|+.-+++|+.... ..|+++||-+|..+.
T Consensus 105 ~~~-~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 105 FGR-EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred cCC-ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 23 58999999999999999997652 579999999998754
No 108
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.41 E-value=1.3e-11 Score=94.03 Aligned_cols=124 Identities=19% Similarity=0.222 Sum_probs=79.6
Q ss_pred cceeecCCCceEEEEEcCCCCC--CCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCC-CCCCCCC-cccHH
Q 037354 36 AARIRLSDGRYLAYREKGVSKI--ESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGY-GESDPNP-RRTVK 111 (346)
Q Consensus 36 ~~~~~~~~g~~l~~~~~g~~~~--~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S~~~~-~~~~~ 111 (346)
.+.+.+.+|..|+.++.-+.+. ...++||+.+|++...+.|..++.+|+.. ||+|+.+|.-.| |.|+..- .+++.
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~N-GFhViRyDsl~HvGlSsG~I~eftms 82 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSAN-GFHVIRYDSLNHVGLSSGDINEFTMS 82 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTT-T--EEEE---B-------------HH
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhC-CeEEEeccccccccCCCCChhhcchH
Confidence 3467788999999998876542 23589999999999999999999999988 999999999877 8888654 56888
Q ss_pred HHHHHHHHHHHHc---CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 112 SEAFDIVELADQL---QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 112 ~~~~~l~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
...+++..+++.+ +. .++.|+.-|+.|-+|...|.+ . .+.-+|+..+..
T Consensus 83 ~g~~sL~~V~dwl~~~g~-~~~GLIAaSLSaRIAy~Va~~-i-~lsfLitaVGVV 134 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGI-RRIGLIAASLSARIAYEVAAD-I-NLSFLITAVGVV 134 (294)
T ss_dssp HHHHHHHHHHHHHHHTT----EEEEEETTHHHHHHHHTTT-S---SEEEEES--S
T ss_pred HhHHHHHHHHHHHHhcCC-CcchhhhhhhhHHHHHHHhhc-c-CcceEEEEeeee
Confidence 8888887777665 66 689999999999999999986 3 477777777654
No 109
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.38 E-value=1.6e-11 Score=97.32 Aligned_cols=99 Identities=22% Similarity=0.227 Sum_probs=64.0
Q ss_pred EEEEcCCCCC---CcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHH-----cCCCCeEEEEE
Q 037354 63 IVLVHGFGSS---KEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQ-----LQLGSKFYVIG 134 (346)
Q Consensus 63 vl~lhG~~~~---~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~-----l~~~~~~~lvG 134 (346)
||++||.+.. ......+...++.+.|+.|+.+|+|=..+..- ..-++|..+.+.-++++ .+. ++++++|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~--p~~~~D~~~a~~~l~~~~~~~~~d~-~~i~l~G 77 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPF--PAALEDVKAAYRWLLKNADKLGIDP-ERIVLIG 77 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSST--THHHHHHHHHHHHHHHTHHHHTEEE-EEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccc--cccccccccceeeeccccccccccc-cceEEee
Confidence 7999998744 33344567778875699999999994322211 11344444444444444 344 6999999
Q ss_pred EccChHHHHHhHhhccC----ceeeeEEecccCC
Q 037354 135 VSIGSYPTWSCLKYIPH----RLAGVALIVPTIN 164 (346)
Q Consensus 135 hS~Gg~~a~~~a~~~p~----~v~~lil~~~~~~ 164 (346)
+|.||.+++.++....+ .++++++++|..+
T Consensus 78 ~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 78 DSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp ETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred cccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 99999999999876543 4899999999753
No 110
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.37 E-value=4.3e-12 Score=104.39 Aligned_cols=122 Identities=20% Similarity=0.192 Sum_probs=83.6
Q ss_pred CCceEEEEEcCC--CCCCCCeEEEEEcCCCCCCcc-cc--cc-------hHHHHHhcCeEEEEECCCCCCCCCCCCcccH
Q 037354 43 DGRYLAYREKGV--SKIESNYRIVLVHGFGSSKEM-NF--PA-------SQELIESLGIYFVLYDRAGYGESDPNPRRTV 110 (346)
Q Consensus 43 ~g~~l~~~~~g~--~~~~~~~~vl~lhG~~~~~~~-~~--~~-------~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~ 110 (346)
||.+|+...+-+ ...++.|+||..|+++..... .. .. ...+.++ ||.|+..|.||.|.|+.......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~-GY~vV~~D~RG~g~S~G~~~~~~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAER-GYAVVVQDVRGTGGSEGEFDPMS 79 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHT-T-EEEEEE-TTSTTS-S-B-TTS
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhC-CCEEEEECCcccccCCCccccCC
Confidence 688999888877 555677999999999965311 11 11 1126655 99999999999999987554424
Q ss_pred HHHHHHHHHHHHHc---CC-CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCC
Q 037354 111 KSEAFDIVELADQL---QL-GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINY 165 (346)
Q Consensus 111 ~~~~~~l~~~l~~l---~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 165 (346)
..-++|..++|+.+ .. +.+|.++|.|++|..++.+|+..|..+++++...+..+.
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 44555555555444 33 248999999999999999999889999999999887654
No 111
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.35 E-value=2e-11 Score=122.17 Aligned_cols=101 Identities=9% Similarity=-0.098 Sum_probs=87.0
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccCh
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGS 139 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg 139 (346)
+++++|+||++++...|..+...|.. ++.|+++|.+|+|.+. ...++++++++++.+.++.+....+++++||||||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~--~~~v~~~~~~g~~~~~-~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg 1144 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDP--QWSIYGIQSPRPDGPM-QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGG 1144 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCC--CCcEEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhh
Confidence 57899999999999999999888876 4789999999998763 34579999999999999887653589999999999
Q ss_pred HHHHHhHhh---ccCceeeeEEecccC
Q 037354 140 YPTWSCLKY---IPHRLAGVALIVPTI 163 (346)
Q Consensus 140 ~~a~~~a~~---~p~~v~~lil~~~~~ 163 (346)
.+|.++|.+ .++++..++++++..
T Consensus 1145 ~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1145 TLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999985 578899999998753
No 112
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.33 E-value=8e-11 Score=103.06 Aligned_cols=127 Identities=15% Similarity=0.127 Sum_probs=88.1
Q ss_pred ccceeecCC---CceEEEEEcCCC-CCCCCeEEEEEcCCCCCCcccccch------------------HHHHHhcCeEEE
Q 037354 35 DAARIRLSD---GRYLAYREKGVS-KIESNYRIVLVHGFGSSKEMNFPAS------------------QELIESLGIYFV 92 (346)
Q Consensus 35 ~~~~~~~~~---g~~l~~~~~g~~-~~~~~~~vl~lhG~~~~~~~~~~~~------------------~~l~~~~g~~vi 92 (346)
...++.+.+ +..++|+.+.+. +.++.|+||+++|.++++..+-.+. ..+.+. ..++
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~--~~~l 125 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE--AYVI 125 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc--cCeE
Confidence 455677743 678999887643 2346799999999998876541110 012222 4599
Q ss_pred EECCC-CCCCCCCCC---cccHHHHHHHHHHHHHHc-------CCCCeEEEEEEccChHHHHHhHhhc----------cC
Q 037354 93 LYDRA-GYGESDPNP---RRTVKSEAFDIVELADQL-------QLGSKFYVIGVSIGSYPTWSCLKYI----------PH 151 (346)
Q Consensus 93 ~~D~~-G~G~S~~~~---~~~~~~~~~~l~~~l~~l-------~~~~~~~lvGhS~Gg~~a~~~a~~~----------p~ 151 (346)
.+|.| |+|.|.... ..+.++.++|+.++++.+ +. .+++|+|||+||.++..+|..- .-
T Consensus 126 ~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~-~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~i 204 (462)
T PTZ00472 126 YVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRA-NDLFVVGESYGGHYAPATAYRINMGNKKGDGLYI 204 (462)
T ss_pred EEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccC-CCEEEEeecchhhhHHHHHHHHHhhccccCCcee
Confidence 99975 888886432 235678888888888743 33 6899999999999987777642 12
Q ss_pred ceeeeEEecccCC
Q 037354 152 RLAGVALIVPTIN 164 (346)
Q Consensus 152 ~v~~lil~~~~~~ 164 (346)
.++++++-++..+
T Consensus 205 nLkGi~IGNg~~d 217 (462)
T PTZ00472 205 NLAGLAVGNGLTD 217 (462)
T ss_pred eeEEEEEeccccC
Confidence 4789999888764
No 113
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.32 E-value=8.4e-11 Score=91.61 Aligned_cols=117 Identities=21% Similarity=0.188 Sum_probs=78.9
Q ss_pred EEEEEcCCCCC--CCCeEEEEEcCCCCCCccccc--chHHHHHhcCeEEEEECCCCCCCCCC------C---C-cccHHH
Q 037354 47 LAYREKGVSKI--ESNYRIVLVHGFGSSKEMNFP--ASQELIESLGIYFVLYDRAGYGESDP------N---P-RRTVKS 112 (346)
Q Consensus 47 l~~~~~g~~~~--~~~~~vl~lhG~~~~~~~~~~--~~~~l~~~~g~~vi~~D~~G~G~S~~------~---~-~~~~~~ 112 (346)
|.|+.+-++.. .+.|.||++||.+++...+.. -+..++++.||-|+.++......... . . ..+...
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 34665554432 245899999999999877653 34678888899999888542211100 0 0 112223
Q ss_pred HHHHHHHHHHHcCC-CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 113 EAFDIVELADQLQL-GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 113 ~~~~l~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
+++.+..+..+.++ .++|++.|+|.||.++..++..||+.+.++..+++..
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 33334444445444 2699999999999999999999999999988888753
No 114
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.32 E-value=2.3e-10 Score=83.19 Aligned_cols=171 Identities=15% Similarity=0.113 Sum_probs=110.7
Q ss_pred eEEEEEcCCCCCCc-ccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccCh
Q 037354 61 YRIVLVHGFGSSKE-MNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGS 139 (346)
Q Consensus 61 ~~vl~lhG~~~~~~-~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg 139 (346)
+.+|++||+.++.. .|... +..+.. .+-.+++. .+.....++|++.+.+.+.... ++++||+||+|+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~---we~~l~-~a~rveq~------~w~~P~~~dWi~~l~~~v~a~~--~~~vlVAHSLGc 70 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSR---WESALP-NARRVEQD------DWEAPVLDDWIARLEKEVNAAE--GPVVLVAHSLGC 70 (181)
T ss_pred ceEEEecCCCCCChhHHHHH---HHhhCc-cchhcccC------CCCCCCHHHHHHHHHHHHhccC--CCeEEEEecccH
Confidence 57999999988763 35432 222211 01122221 1123478899999988888873 579999999999
Q ss_pred HHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCcc
Q 037354 140 YPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVY 219 (346)
Q Consensus 140 ~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (346)
..+++++......|+|++|++|+-.- .+ .
T Consensus 71 ~~v~h~~~~~~~~V~GalLVAppd~~----~~--~--------------------------------------------- 99 (181)
T COG3545 71 ATVAHWAEHIQRQVAGALLVAPPDVS----RP--E--------------------------------------------- 99 (181)
T ss_pred HHHHHHHHhhhhccceEEEecCCCcc----cc--c---------------------------------------------
Confidence 99999999887799999999986200 00 0
Q ss_pred CccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHH
Q 037354 220 FSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFI 299 (346)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~ 299 (346)
........+... ....+.-| .+++...+|++++.+.++.+
T Consensus 100 ---~~~~~~~tf~~~------------------------------p~~~lpfp-------s~vvaSrnDp~~~~~~a~~~ 139 (181)
T COG3545 100 ---IRPKHLMTFDPI------------------------------PREPLPFP-------SVVVASRNDPYVSYEHAEDL 139 (181)
T ss_pred ---cchhhccccCCC------------------------------ccccCCCc-------eeEEEecCCCCCCHHHHHHH
Confidence 000000000000 01122233 99999999999999999999
Q ss_pred HHhcCCceEEEecCCCcceeec----cchhHHHHHHHhhc
Q 037354 300 SRKLSWIKYHEVRDGGHLILHY----NGMCDYFLRALLVG 335 (346)
Q Consensus 300 ~~~~~~~~~~~i~~~gH~~~~e----~~~~~~~i~~fl~~ 335 (346)
++.+ .+.++.+..+||+.-.+ -.+....+.+|+.+
T Consensus 140 a~~w-gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 140 ANAW-GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred HHhc-cHhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 9998 67788888899976542 33455566666554
No 115
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.31 E-value=6.9e-11 Score=93.20 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=76.5
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCC-CcccHHHHHHHHHHHHH-Hc------CCCCeE
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPN-PRRTVKSEAFDIVELAD-QL------QLGSKF 130 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~~l~~~l~-~l------~~~~~~ 130 (346)
.-|+|||+||+......|..++++++.. ||-|+++|+...+..... ...+..+.++++.+=++ .+ +. .++
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvASh-GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~-s~l 93 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASH-GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDF-SKL 93 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhC-ceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccc-cce
Confidence 5789999999998888888999999977 999999996654332211 11244455555443222 22 34 589
Q ss_pred EEEEEccChHHHHHhHhhc-----cCceeeeEEeccc
Q 037354 131 YVIGVSIGSYPTWSCLKYI-----PHRLAGVALIVPT 162 (346)
Q Consensus 131 ~lvGhS~Gg~~a~~~a~~~-----p~~v~~lil~~~~ 162 (346)
.+.|||-||-+|+.++..+ +.+++++++++|.
T Consensus 94 ~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 94 ALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred EEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 9999999999999999887 5689999999996
No 116
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.31 E-value=7.8e-11 Score=93.96 Aligned_cols=104 Identities=23% Similarity=0.348 Sum_probs=68.5
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHH-HhcCeE--E--EEECCCCC----CCCC---CCC---------c-ccHHHHHHH
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELI-ESLGIY--F--VLYDRAGY----GESD---PNP---------R-RTVKSEAFD 116 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~-~~~g~~--v--i~~D~~G~----G~S~---~~~---------~-~~~~~~~~~ 116 (346)
...|.||+||++++...+..++..+. +. |.. + +-++.-|+ |.=. ..+ . .+....+++
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~-~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQ-GVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCS-TS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhc-CCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 45799999999999999999999997 33 321 2 33333332 2111 111 1 257778888
Q ss_pred HHHHHHHc----CCCCeEEEEEEccChHHHHHhHhhccC-----ceeeeEEecccCC
Q 037354 117 IVELADQL----QLGSKFYVIGVSIGSYPTWSCLKYIPH-----RLAGVALIVPTIN 164 (346)
Q Consensus 117 l~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~ 164 (346)
+..++..| ++ +++.+|||||||..++.++..+.. ++.++|.|++...
T Consensus 89 l~~vl~~L~~~Y~~-~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 89 LKKVLKYLKKKYHF-KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHCC---SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHHhcCC-CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 87777666 67 699999999999999999887643 6899999998643
No 117
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.30 E-value=6.8e-11 Score=87.59 Aligned_cols=198 Identities=11% Similarity=0.104 Sum_probs=117.7
Q ss_pred eecCCCceEEEEEcCCCCCCCCeEEEEEcCCC---CCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCC--cccHHHH
Q 037354 39 IRLSDGRYLAYREKGVSKIESNYRIVLVHGFG---SSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNP--RRTVKSE 113 (346)
Q Consensus 39 ~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~---~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~ 113 (346)
+....|.+-.+..||+.. ..+..||+||.- ++.......+.-+. +.||+|...++ +.+.... ..++.++
T Consensus 48 l~Yg~~g~q~VDIwg~~~--~~klfIfIHGGYW~~g~rk~clsiv~~a~-~~gY~vasvgY---~l~~q~htL~qt~~~~ 121 (270)
T KOG4627|consen 48 LRYGEGGRQLVDIWGSTN--QAKLFIFIHGGYWQEGDRKMCLSIVGPAV-RRGYRVASVGY---NLCPQVHTLEQTMTQF 121 (270)
T ss_pred cccCCCCceEEEEecCCC--CccEEEEEecchhhcCchhcccchhhhhh-hcCeEEEEecc---CcCcccccHHHHHHHH
Confidence 333344477788888754 788999999854 23333223333333 44999998854 4443211 1244444
Q ss_pred HHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhh-ccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHh
Q 037354 114 AFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKY-IPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAK 192 (346)
Q Consensus 114 ~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
..-+.=+++...-.+.+.+-|||.|+++|+.+..+ +..+|.+++|.++.... .
T Consensus 122 ~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l----------------------~---- 175 (270)
T KOG4627|consen 122 THGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDL----------------------R---- 175 (270)
T ss_pred HHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhH----------------------H----
Confidence 44444445555443577888999999999887765 45589999999886310 0
Q ss_pred hchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCC
Q 037354 193 HIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNP 272 (346)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p 272 (346)
.+.. ... .+.-.++... ......++ | ....++.+
T Consensus 176 ------------EL~~-te~--g~dlgLt~~~-----------------------ae~~Scdl------~--~~~~v~~~ 209 (270)
T KOG4627|consen 176 ------------ELSN-TES--GNDLGLTERN-----------------------AESVSCDL------W--EYTDVTVW 209 (270)
T ss_pred ------------HHhC-Ccc--ccccCcccch-----------------------hhhcCccH------H--HhcCceee
Confidence 0000 000 0000000000 00000000 0 11234445
Q ss_pred CCCCCCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec
Q 037354 273 FPHNESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY 321 (346)
Q Consensus 273 ~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 321 (346)
+|++.|++|--.-.+..+.+..+...+++..+++.+|+-.++
T Consensus 210 -------ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 210 -------ILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIE 251 (270)
T ss_pred -------eeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHH
Confidence 999999999877678888999999899999999999987764
No 118
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.30 E-value=4.8e-09 Score=86.97 Aligned_cols=124 Identities=15% Similarity=0.064 Sum_probs=86.7
Q ss_pred eeecCCCceEEEEEcCCCCC---CCCeEEEEEcCCCCC-----CcccccchHHHHHhcCeEEEEECCCCCCCCCCCCccc
Q 037354 38 RIRLSDGRYLAYREKGVSKI---ESNYRIVLVHGFGSS-----KEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRT 109 (346)
Q Consensus 38 ~~~~~~g~~l~~~~~g~~~~---~~~~~vl~lhG~~~~-----~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~ 109 (346)
.+.......+..+.+-+... ...|.|||+||.|.. ...|..+...++.+.+..|+++|+|=--+..-+. .
T Consensus 65 dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa--~ 142 (336)
T KOG1515|consen 65 DVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA--A 142 (336)
T ss_pred eeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc--c
Confidence 34444555677777655432 357899999998743 4567788888888889999999999555444333 3
Q ss_pred HHHHHHHHHHHHH------HcCCCCeEEEEEEccChHHHHHhHhhc------cCceeeeEEecccCC
Q 037354 110 VKSEAFDIVELAD------QLQLGSKFYVIGVSIGSYPTWSCLKYI------PHRLAGVALIVPTIN 164 (346)
Q Consensus 110 ~~~~~~~l~~~l~------~l~~~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lil~~~~~~ 164 (346)
++|-.+.+.-+.+ ..+. ++++|+|-|.||.+|..+|.+. +-++++.||+-|...
T Consensus 143 y~D~~~Al~w~~~~~~~~~~~D~-~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLKLGADP-SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred chHHHHHHHHHHHhHHHHhCCCc-ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 4444444443333 2355 6899999999999998877543 357999999999864
No 119
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.29 E-value=1.4e-10 Score=107.41 Aligned_cols=82 Identities=16% Similarity=0.031 Sum_probs=62.6
Q ss_pred HHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCC-------------------CCeEEEEEEccChHH
Q 037354 81 QELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQL-------------------GSKFYVIGVSIGSYP 141 (346)
Q Consensus 81 ~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~-------------------~~~~~lvGhS~Gg~~ 141 (346)
..+..+ ||.|+..|.||+|.|+.....--.+-.+|..++|+.+.- +.+|.++|.|+||.+
T Consensus 273 ~~~~~r-GYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 273 DYFLPR-GFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHHhC-CeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 455555 999999999999999875332223445555555555530 259999999999999
Q ss_pred HHHhHhhccCceeeeEEecccC
Q 037354 142 TWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 142 a~~~a~~~p~~v~~lil~~~~~ 163 (346)
++.+|...|+.++++|.+++..
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCC
Confidence 9999998899999999988764
No 120
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.28 E-value=9.6e-10 Score=92.55 Aligned_cols=120 Identities=18% Similarity=0.091 Sum_probs=79.3
Q ss_pred CCceEEEEEcCC--CCCCCCeEEEEEcCCCC---CCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHH
Q 037354 43 DGRYLAYREKGV--SKIESNYRIVLVHGFGS---SKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDI 117 (346)
Q Consensus 43 ~g~~l~~~~~g~--~~~~~~~~vl~lhG~~~---~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l 117 (346)
++..+.++.+.+ ......|+||++||.+- +..........+....|+.|+++|+|-..+-.-+ ..+++..+.+
T Consensus 60 ~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p--~~~~d~~~a~ 137 (312)
T COG0657 60 SGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFP--AALEDAYAAY 137 (312)
T ss_pred CCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCC--chHHHHHHHH
Confidence 344455666654 33335799999999873 3344446667777777999999999854443221 1344433333
Q ss_pred HHHH---HHcCC-CCeEEEEEEccChHHHHHhHhhccC----ceeeeEEecccCC
Q 037354 118 VELA---DQLQL-GSKFYVIGVSIGSYPTWSCLKYIPH----RLAGVALIVPTIN 164 (346)
Q Consensus 118 ~~~l---~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lil~~~~~~ 164 (346)
..+. +.++. .+++.++|+|.||.+++.++..-.+ ...+.+++.|..+
T Consensus 138 ~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 138 RWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred HHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 3333 33343 2689999999999999998876543 4788999999764
No 121
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.26 E-value=3.5e-10 Score=89.89 Aligned_cols=101 Identities=17% Similarity=0.179 Sum_probs=86.0
Q ss_pred eEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChH
Q 037354 61 YRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSY 140 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ 140 (346)
|+|+++|+.++....|.++...+... ..|+.++.||.|.-. ....+++++++...+.|.......+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~--~~v~~l~a~g~~~~~-~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL--LPVYGLQAPGYGAGE-QPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC--ceeeccccCcccccc-cccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 58999999999999999999999876 679999999998522 234599999999988888887656999999999999
Q ss_pred HHHHhHhh---ccCceeeeEEecccCC
Q 037354 141 PTWSCLKY---IPHRLAGVALIVPTIN 164 (346)
Q Consensus 141 ~a~~~a~~---~p~~v~~lil~~~~~~ 164 (346)
+|...|.+ ..+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999875 3558999999999753
No 122
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.23 E-value=1.8e-09 Score=76.87 Aligned_cols=101 Identities=18% Similarity=0.221 Sum_probs=75.3
Q ss_pred CCeEEEEEcCCCCCCcc--cccchHHHHHhcCeEEEEECCCCC-----CCCCCCCc--ccHHHHHHHHHHHHHHcCCCCe
Q 037354 59 SNYRIVLVHGFGSSKEM--NFPASQELIESLGIYFVLYDRAGY-----GESDPNPR--RTVKSEAFDIVELADQLQLGSK 129 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~-----G~S~~~~~--~~~~~~~~~l~~~l~~l~~~~~ 129 (346)
...+||+.||.+.+.++ ....+..|+.. |+.|..++++.. |.-.+++. .-..++...+.++.+.+.- .+
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~-G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~-gp 90 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARR-GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAE-GP 90 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhC-ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccC-Cc
Confidence 34689999999877654 45666777766 999999998754 32222222 2456777788888888876 49
Q ss_pred EEEEEEccChHHHHHhHhhccCceeeeEEecc
Q 037354 130 FYVIGVSIGSYPTWSCLKYIPHRLAGVALIVP 161 (346)
Q Consensus 130 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 161 (346)
.++-|+||||-++.+.+...-..|.++++++=
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgY 122 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGY 122 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecC
Confidence 99999999999998888766556999998874
No 123
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.20 E-value=7.7e-10 Score=84.65 Aligned_cols=106 Identities=21% Similarity=0.208 Sum_probs=82.2
Q ss_pred CCCeEEEEEcCCCCCCcccccchHHHHHhcC--eEEEEECCCCCCCCC---C-------CCcccHHHHHHHHHHHHHHc-
Q 037354 58 ESNYRIVLVHGFGSSKEMNFPASQELIESLG--IYFVLYDRAGYGESD---P-------NPRRTVKSEAFDIVELADQL- 124 (346)
Q Consensus 58 ~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~S~---~-------~~~~~~~~~~~~l~~~l~~l- 124 (346)
.+++.+++++|.++....|.+++.+|....+ +.++.+...||-.-. . .+.+++++.++.-.++++..
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 3688999999999999999999998887654 457777777775432 1 12358999999888888665
Q ss_pred CCCCeEEEEEEccChHHHHHhHhhc-c-CceeeeEEecccC
Q 037354 125 QLGSKFYVIGVSIGSYPTWSCLKYI-P-HRLAGVALIVPTI 163 (346)
Q Consensus 125 ~~~~~~~lvGhS~Gg~~a~~~a~~~-p-~~v~~lil~~~~~ 163 (346)
--+.+++++|||-|+++.+.++... + -.|++++++=|..
T Consensus 107 Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 107 PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 3347999999999999999988742 2 2688888887764
No 124
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.20 E-value=1.4e-10 Score=91.58 Aligned_cols=103 Identities=17% Similarity=0.128 Sum_probs=69.4
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHh-------cCeEEEEECCCCCCCCCCCCcccHHHH----HHHHHHHHHHc---
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIES-------LGIYFVLYDRAGYGESDPNPRRTVKSE----AFDIVELADQL--- 124 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~-------~g~~vi~~D~~G~G~S~~~~~~~~~~~----~~~l~~~l~~l--- 124 (346)
++.+|||+||.+++...++.+...+.+. ..+++++.|+......-. ...+.+. .+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~--g~~l~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH--GRTLQRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc--cccHHHHHHHHHHHHHHHHHhhhhc
Confidence 5779999999999988887776665321 247788999875432211 1122222 23344444444
Q ss_pred -CCCCeEEEEEEccChHHHHHhHhhcc---CceeeeEEecccC
Q 037354 125 -QLGSKFYVIGVSIGSYPTWSCLKYIP---HRLAGVALIVPTI 163 (346)
Q Consensus 125 -~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lil~~~~~ 163 (346)
...+++++|||||||.+|..++...+ +.|+.+|.++++-
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 22379999999999999988776543 4799999999763
No 125
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.20 E-value=1.3e-09 Score=100.83 Aligned_cols=223 Identities=19% Similarity=0.138 Sum_probs=143.0
Q ss_pred ccceeecCCCceEEEEEcCCCC---CCCCeEEEEEcCCCCCCcc---c-ccchHHHHHhcCeEEEEECCCCCCCCCCCC-
Q 037354 35 DAARIRLSDGRYLAYREKGVSK---IESNYRIVLVHGFGSSKEM---N-FPASQELIESLGIYFVLYDRAGYGESDPNP- 106 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~---~~~~~~vl~lhG~~~~~~~---~-~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~- 106 (346)
+-..+.. +|....+...-++. .+.-|.||.+||.+++... | ..+...+....|+.|+.+|.||.|.....-
T Consensus 499 ~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~ 577 (755)
T KOG2100|consen 499 EFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFR 577 (755)
T ss_pred eeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHH
Confidence 3445556 88888888877643 3345778888998874322 2 134455566679999999999998765321
Q ss_pred --------cccHHHHHHHHHHHHHHcCC-CCeEEEEEEccChHHHHHhHhhccCcee-eeEEecccCCCCCCCCCcchhh
Q 037354 107 --------RRTVKSEAFDIVELADQLQL-GSKFYVIGVSIGSYPTWSCLKYIPHRLA-GVALIVPTINYEWPSLPQSLIR 176 (346)
Q Consensus 107 --------~~~~~~~~~~l~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~-~lil~~~~~~~~~~~~~~~~~~ 176 (346)
....+|+...+..+++..-+ .+++.++|+|.||.+++.++...|+.+- ..+.++|..++. +...
T Consensus 578 ~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~---~yds--- 651 (755)
T KOG2100|consen 578 SALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL---YYDS--- 651 (755)
T ss_pred HHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee---eecc---
Confidence 12566777777777765432 2689999999999999999999885554 459999986431 0000
Q ss_pred HHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhh
Q 037354 177 TDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVV 256 (346)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (346)
...+.. ...+.. ....+.+
T Consensus 652 ----------------------------------------------~~tery---mg~p~~-----~~~~y~e------- 670 (755)
T KOG2100|consen 652 ----------------------------------------------TYTERY---MGLPSE-----NDKGYEE------- 670 (755)
T ss_pred ----------------------------------------------cccHhh---cCCCcc-----ccchhhh-------
Confidence 000000 000000 0000000
Q ss_pred hhcCCCCCCCCCCCCCCCCCCCcE-EEEecCCCCCCchhHHHHHHHhcC----CceEEEecCCCcceeec--cchhHHHH
Q 037354 257 AAFGDWGFDPVRLSNPFPHNESSV-HIWQGYEDKVVPFQLQRFISRKLS----WIKYHEVRDGGHLILHY--NGMCDYFL 329 (346)
Q Consensus 257 ~~~~~~~~~~~~i~~p~~~i~~Pv-lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e--~~~~~~~i 329 (346)
..+..++..++.|. |++||+.|..|+.+.+..+.+.+. ..++.++|+.+|.+..- -..+...+
T Consensus 671 ----------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~ 740 (755)
T KOG2100|consen 671 ----------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKL 740 (755)
T ss_pred ----------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHH
Confidence 01222333333335 999999999999888877776651 37899999999999884 46678888
Q ss_pred HHHhhc
Q 037354 330 RALLVG 335 (346)
Q Consensus 330 ~~fl~~ 335 (346)
..|+..
T Consensus 741 ~~~~~~ 746 (755)
T KOG2100|consen 741 DRFLRD 746 (755)
T ss_pred HHHHHH
Confidence 888874
No 126
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.19 E-value=5e-11 Score=98.19 Aligned_cols=132 Identities=17% Similarity=0.162 Sum_probs=75.7
Q ss_pred CCCCccccceeecCCCceEEEEEcCCCC-CCCCeEEEEEcCCCCCCcc--------------cc----cchHHHHHhcCe
Q 037354 29 NGDGLVDAARIRLSDGRYLAYREKGVSK-IESNYRIVLVHGFGSSKEM--------------NF----PASQELIESLGI 89 (346)
Q Consensus 29 ~~~~~~~~~~~~~~~g~~l~~~~~g~~~-~~~~~~vl~lhG~~~~~~~--------------~~----~~~~~l~~~~g~ 89 (346)
...+..+.-.|.+.++.++.....-+.. ..+.|.||++||-++..+. +. .....|+++ ||
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~-GY 161 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR-GY 161 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT-TS
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC-CC
Confidence 3345556667777788777776554443 3467899999998765321 11 234567766 99
Q ss_pred EEEEECCCCCCCCCCCCc------ccHHHHHH---------------HHHHHHHHcCC-----CCeEEEEEEccChHHHH
Q 037354 90 YFVLYDRAGYGESDPNPR------RTVKSEAF---------------DIVELADQLQL-----GSKFYVIGVSIGSYPTW 143 (346)
Q Consensus 90 ~vi~~D~~G~G~S~~~~~------~~~~~~~~---------------~l~~~l~~l~~-----~~~~~lvGhS~Gg~~a~ 143 (346)
-|+++|.+|+|+...... ++.+.++. |....++.|.- .++|.++|+||||..++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHH
Confidence 999999999998754331 12222222 22234444421 26899999999999999
Q ss_pred HhHhhccCceeeeEEeccc
Q 037354 144 SCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 144 ~~a~~~p~~v~~lil~~~~ 162 (346)
.+++. .++|++.|..+..
T Consensus 242 ~LaAL-DdRIka~v~~~~l 259 (390)
T PF12715_consen 242 WLAAL-DDRIKATVANGYL 259 (390)
T ss_dssp HHHHH--TT--EEEEES-B
T ss_pred HHHHc-chhhHhHhhhhhh
Confidence 99998 6789888887754
No 127
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.19 E-value=2.5e-09 Score=92.57 Aligned_cols=224 Identities=16% Similarity=0.098 Sum_probs=142.8
Q ss_pred ccceeecCCCceEEEEEcCCCC---CCCCeEEEEEcCCCCCCc-----cccc--chHHHHHhcCeEEEEECCCCCCCCCC
Q 037354 35 DAARIRLSDGRYLAYREKGVSK---IESNYRIVLVHGFGSSKE-----MNFP--ASQELIESLGIYFVLYDRAGYGESDP 104 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~---~~~~~~vl~lhG~~~~~~-----~~~~--~~~~l~~~~g~~vi~~D~~G~G~S~~ 104 (346)
+.-.+....|.+++...+.+.+ +++-|+++++-|.++--. .|.. -...|+.. ||-|+.+|-||.-....
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Lasl-Gy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASL-GYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhc-ceEEEEEcCCCccccch
Confidence 3444566667777766766543 234689999999886432 2221 12455544 99999999999765432
Q ss_pred CC--------c-ccHHHHHHHHHHHHHHcC---CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCc
Q 037354 105 NP--------R-RTVKSEAFDIVELADQLQ---LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQ 172 (346)
Q Consensus 105 ~~--------~-~~~~~~~~~l~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~ 172 (346)
.- + -.++|.++.+.-+.++.| . +++.+.|||+||.+++....++|+-++..|.=+|.... .
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidm-drV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W--~---- 765 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDM-DRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDW--R---- 765 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccc-hheeEeccccccHHHHHHhhcCcceeeEEeccCcceee--e----
Confidence 11 1 278899999988888875 4 68999999999999999999999988887776665421 0
Q ss_pred chhhHHHhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHH-Hh
Q 037354 173 SLIRTDYRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFY-AL 251 (346)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 251 (346)
.+... ...+++..+.. ...++.. +.
T Consensus 766 ----------------------------------------------~YDTg---YTERYMg~P~~-----nE~gY~agSV 791 (867)
T KOG2281|consen 766 ----------------------------------------------LYDTG---YTERYMGYPDN-----NEHGYGAGSV 791 (867)
T ss_pred ----------------------------------------------eeccc---chhhhcCCCcc-----chhcccchhH
Confidence 00000 00111111100 0000000 00
Q ss_pred hhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhc----CCceEEEecCCCcceee-c-cchh
Q 037354 252 RGDVVAAFGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKL----SWIKYHEVRDGGHLILH-Y-NGMC 325 (346)
Q Consensus 252 ~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~-e-~~~~ 325 (346)
.... . .+.+=... .|++||--|..|.......+.+.+ ..-++.++|+--|.+-. | ..-.
T Consensus 792 ~~~V----e----klpdepnR-------LlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~y 856 (867)
T KOG2281|consen 792 AGHV----E----KLPDEPNR-------LLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYY 856 (867)
T ss_pred HHHH----h----hCCCCCce-------EEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhH
Confidence 0000 0 01111223 899999999999988876666555 34589999999999887 5 7778
Q ss_pred HHHHHHHhhc
Q 037354 326 DYFLRALLVG 335 (346)
Q Consensus 326 ~~~i~~fl~~ 335 (346)
...|..|+++
T Consensus 857 E~rll~FlQ~ 866 (867)
T KOG2281|consen 857 EARLLHFLQE 866 (867)
T ss_pred HHHHHHHHhh
Confidence 8889999876
No 128
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.14 E-value=1.4e-09 Score=85.47 Aligned_cols=120 Identities=22% Similarity=0.266 Sum_probs=75.6
Q ss_pred ecCCCceEEEEEcCCCC---CCC-CeEEEEEcCCCCCCcccccchHHHHH----------hcCeEEEEECCC-CCCCCCC
Q 037354 40 RLSDGRYLAYREKGVSK---IES-NYRIVLVHGFGSSKEMNFPASQELIE----------SLGIYFVLYDRA-GYGESDP 104 (346)
Q Consensus 40 ~~~~g~~l~~~~~g~~~---~~~-~~~vl~lhG~~~~~~~~~~~~~~l~~----------~~g~~vi~~D~~-G~G~S~~ 104 (346)
....|.+|-|+.+-+.. .+. -|.|||+||.+..+..-. ..+.. +.++-|+++-+- =+-.++.
T Consensus 167 d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~---~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~ 243 (387)
T COG4099 167 DESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND---KVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE 243 (387)
T ss_pred ccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh---hhhhcCccceeeecccCceEEEccccccccccccc
Confidence 33468899999886632 122 389999999998765432 12222 113334443311 1111222
Q ss_pred CCcccHHHHHHHHH-HHHHHcCCC-CeEEEEEEccChHHHHHhHhhccCceeeeEEeccc
Q 037354 105 NPRRTVKSEAFDIV-ELADQLQLG-SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 105 ~~~~~~~~~~~~l~-~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~ 162 (346)
.+..-.....+.+. .+.++.+++ .+++++|.|+||+-++.++.++|+.+.+.+++++.
T Consensus 244 ~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 244 KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 11223444445554 333555552 58999999999999999999999999999999985
No 129
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.13 E-value=6.2e-10 Score=82.92 Aligned_cols=97 Identities=23% Similarity=0.284 Sum_probs=74.3
Q ss_pred eEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHc----CCCCeEEEEEEc
Q 037354 61 YRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQL----QLGSKFYVIGVS 136 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l----~~~~~~~lvGhS 136 (346)
..+||+.|=++-...=..++..|+++ |+.|+.+|-+-+=.+.+ +.++.+.|+..++++. +. ++++|+|+|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~-G~~VvGvdsl~Yfw~~r----tP~~~a~Dl~~~i~~y~~~w~~-~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQ-GVPVVGVDSLRYFWSER----TPEQTAADLARIIRHYRARWGR-KRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHC-CCeEEEechHHHHhhhC----CHHHHHHHHHHHHHHHHHHhCC-ceEEEEeec
Confidence 46788888776654444677788877 99999999765544443 6778888888877665 45 699999999
Q ss_pred cChHHHHHhHhhcc----CceeeeEEecccC
Q 037354 137 IGSYPTWSCLKYIP----HRLAGVALIVPTI 163 (346)
Q Consensus 137 ~Gg~~a~~~a~~~p----~~v~~lil~~~~~ 163 (346)
+|+-+.-....+.| ++|..++|+++..
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 99988877776666 4799999999864
No 130
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.13 E-value=3.5e-10 Score=89.13 Aligned_cols=162 Identities=19% Similarity=0.166 Sum_probs=86.6
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHh---cCeEEEEECCCC-----CCCCC-----------CCC-------------
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIES---LGIYFVLYDRAG-----YGESD-----------PNP------------- 106 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~---~g~~vi~~D~~G-----~G~S~-----------~~~------------- 106 (346)
.++.||||||++.++..+......|.+. .++.++.+|-|- -|-.. ..+
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4689999999999999988665555443 146777776542 11110 000
Q ss_pred cccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhcc--------CceeeeEEecccCCCCCCCCCcchhhHH
Q 037354 107 RRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIP--------HRLAGVALIVPTINYEWPSLPQSLIRTD 178 (346)
Q Consensus 107 ~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p--------~~v~~lil~~~~~~~~~~~~~~~~~~~~ 178 (346)
...+++-.+.|.+.++..+. -..++|+|.||.+|..++.... ..++-+|++++.... ..
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~-------~~---- 149 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP-------DP---- 149 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E-------EE----
T ss_pred ccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC-------ch----
Confidence 11356666677777777663 3579999999999988875421 247888888875310 00
Q ss_pred HhhhhhhhHHHHHhhchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhh
Q 037354 179 YRRRLIQWSLWIAKHIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAA 258 (346)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (346)
. +. .
T Consensus 150 -----------------------------------------------~------------------------~~-~---- 153 (212)
T PF03959_consen 150 -----------------------------------------------D------------------------YQ-E---- 153 (212)
T ss_dssp ------------------------------------------------------------------------GT-T----
T ss_pred -----------------------------------------------h------------------------hh-h----
Confidence 0 00 0
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCchhHHHHHHHhcCC-ceEEEecCCCcceeec
Q 037354 259 FGDWGFDPVRLSNPFPHNESSVHIWQGYEDKVVPFQLQRFISRKLSW-IKYHEVRDGGHLILHY 321 (346)
Q Consensus 259 ~~~~~~~~~~i~~p~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e 321 (346)
.+ .-.+|++|+|.|+|++|.+++++.++.+.+.+.+ .+++..+ +||.+...
T Consensus 154 ---------~~--~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 154 ---------LY--DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRK 205 (212)
T ss_dssp ---------TT----TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----
T ss_pred ---------hh--ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCC
Confidence 00 1123455599999999999999999999998866 7777777 59988765
No 131
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.12 E-value=1.7e-09 Score=81.69 Aligned_cols=181 Identities=13% Similarity=0.028 Sum_probs=115.6
Q ss_pred EEEEEcCCCCCCCCeEEEEEcCCCCCCcc-cccchHHHHHhcCeEEEEECCC-CCCCCCCCC---------cccHHHHHH
Q 037354 47 LAYREKGVSKIESNYRIVLVHGFGSSKEM-NFPASQELIESLGIYFVLYDRA-GYGESDPNP---------RRTVKSEAF 115 (346)
Q Consensus 47 l~~~~~g~~~~~~~~~vl~lhG~~~~~~~-~~~~~~~l~~~~g~~vi~~D~~-G~G~S~~~~---------~~~~~~~~~ 115 (346)
+..+..|+.+ ++..||++--..+.... -...+..++.+ ||.|+++|+- |--.|.... ..+....-.
T Consensus 28 ldaYv~gs~~--~~~~li~i~DvfG~~~~n~r~~Adk~A~~-Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~ 104 (242)
T KOG3043|consen 28 LDAYVVGSTS--SKKVLIVIQDVFGFQFPNTREGADKVALN-GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWK 104 (242)
T ss_pred eeEEEecCCC--CCeEEEEEEeeeccccHHHHHHHHHHhcC-CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchh
Confidence 3344455543 34566666655444433 44556666666 9999999974 422222100 124444444
Q ss_pred HHHHHHHH---cCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHh
Q 037354 116 DIVELADQ---LQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAK 192 (346)
Q Consensus 116 ~l~~~l~~---l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
++..+++. .+..+++.++|.+|||-++..+....| .+.+.+.+-|... .
T Consensus 105 ~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~-------d-------------------- 156 (242)
T KOG3043|consen 105 DITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV-------D-------------------- 156 (242)
T ss_pred HHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC-------C--------------------
Confidence 55544444 353479999999999999988888876 6888777776421 0
Q ss_pred hchhhhHHHHhhhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCC
Q 037354 193 HIPGLLYWWISQKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNP 272 (346)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p 272 (346)
. .+..++.+|
T Consensus 157 --------------------------------------------------------------~--------~D~~~vk~P 166 (242)
T KOG3043|consen 157 --------------------------------------------------------------S--------ADIANVKAP 166 (242)
T ss_pred --------------------------------------------------------------h--------hHHhcCCCC
Confidence 0 012244556
Q ss_pred CCCCCCcEEEEecCCCCCCchhHHHHHHHhcC---C--ceEEEecCCCcceee-----c-c------chhHHHHHHHhhc
Q 037354 273 FPHNESSVHIWQGYEDKVVPFQLQRFISRKLS---W--IKYHEVRDGGHLILH-----Y-N------GMCDYFLRALLVG 335 (346)
Q Consensus 273 ~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~---~--~~~~~i~~~gH~~~~-----e-~------~~~~~~i~~fl~~ 335 (346)
+|++.|+.|..+|++....+.+.+. . ..+.+++|.+|..+. + | |+..+.+..|+++
T Consensus 167 -------ilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 167 -------ILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred -------EEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988777762 2 369999999998773 1 2 3455566666654
No 132
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.10 E-value=2.7e-09 Score=82.63 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=76.9
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc-ccHHHHHHHHHHHHHHc-------CCCCeE
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR-RTVKSEAFDIVELADQL-------QLGSKF 130 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~l-------~~~~~~ 130 (346)
.-|.|+|+||+......|..++.+++.+ ||-|+++++-.--..+...+ .+..+.++++..-+.++ ++ .++
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIASH-GfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl-~kl 122 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIASH-GFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANL-SKL 122 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHhhc-CeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCccccc-ceE
Confidence 5689999999999999999999999976 99999999864211111111 24445555555555443 34 589
Q ss_pred EEEEEccChHHHHHhHhhcc--CceeeeEEecccC
Q 037354 131 YVIGVSIGSYPTWSCLKYIP--HRLAGVALIVPTI 163 (346)
Q Consensus 131 ~lvGhS~Gg~~a~~~a~~~p--~~v~~lil~~~~~ 163 (346)
.++|||.||-.|..+|..+. -++.+||.++|..
T Consensus 123 al~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 123 ALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred EEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 99999999999999998774 2688999999874
No 133
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.10 E-value=4.8e-10 Score=88.14 Aligned_cols=50 Identities=18% Similarity=0.258 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHc-CC-CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 113 EAFDIVELADQL-QL-GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 113 ~~~~l~~~l~~l-~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
+.+...+++... .. +++|.|+|.|.||-+|+.+|..+| .|+++|.++|+.
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 334444455443 22 258999999999999999999998 799999999874
No 134
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.07 E-value=1.9e-09 Score=91.95 Aligned_cols=102 Identities=20% Similarity=0.274 Sum_probs=58.9
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCC------CC-----C-------C-------c----c-
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGES------DP-----N-------P-------R----R- 108 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S------~~-----~-------~-------~----~- 108 (346)
.-|+|||-||++++...|..++.+|+.+ ||-|+++|.|..-.+ +. . . . .
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 5699999999999999999999999987 999999999943111 00 0 0 0 0
Q ss_pred ------cHHHHHHHHHHHHHH--------------------------cCCCCeEEEEEEccChHHHHHhHhhccCceeee
Q 037354 109 ------TVKSEAFDIVELADQ--------------------------LQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGV 156 (346)
Q Consensus 109 ------~~~~~~~~l~~~l~~--------------------------l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 156 (346)
-++.-++++..+++. ++. +++.++|||+||..++..+.. ..++++.
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~-~~i~~~GHSFGGATa~~~l~~-d~r~~~~ 255 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDL-SRIGLAGHSFGGATALQALRQ-DTRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEE-EEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcch-hheeeeecCchHHHHHHHHhh-ccCcceE
Confidence 000111222222221 123 579999999999999988876 4789999
Q ss_pred EEecccC
Q 037354 157 ALIVPTI 163 (346)
Q Consensus 157 il~~~~~ 163 (346)
|+++++.
T Consensus 256 I~LD~W~ 262 (379)
T PF03403_consen 256 ILLDPWM 262 (379)
T ss_dssp EEES---
T ss_pred EEeCCcc
Confidence 9999963
No 135
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.03 E-value=4e-09 Score=79.21 Aligned_cols=102 Identities=18% Similarity=0.200 Sum_probs=71.9
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCC-------------------CCCCcccHHHHHHHHHHH
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGES-------------------DPNPRRTVKSEAFDIVEL 120 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S-------------------~~~~~~~~~~~~~~l~~~ 120 (346)
..+||++||.+.+...|.++++.+... +...|++-.|-.-.+ ......++...++.+..+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~-NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLP-NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCC-CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 458999999999999998777775544 566777644322111 111112455666667777
Q ss_pred HHHc---CC-CCeEEEEEEccChHHHHHhHhhccCceeeeEEeccc
Q 037354 121 ADQL---QL-GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 121 l~~l---~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~ 162 (346)
+++. ++ ..++.+-|.|+||.+++..+..+|..+.+++-..+.
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 7654 32 157899999999999999999999888888877765
No 136
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.01 E-value=1.9e-08 Score=76.11 Aligned_cols=58 Identities=17% Similarity=0.236 Sum_probs=44.3
Q ss_pred CCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec---cchhHHHHHHHhhc
Q 037354 277 ESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY---NGMCDYFLRALLVG 335 (346)
Q Consensus 277 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e---~~~~~~~i~~fl~~ 335 (346)
++|.|.|.|+.|.++|.+.+..|++.+++..++.-+ +||++... .+.+.+.|..++++
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHHHh
Confidence 334999999999999999999999999999766666 59998874 34444444444443
No 137
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.97 E-value=3.5e-09 Score=86.91 Aligned_cols=91 Identities=23% Similarity=0.178 Sum_probs=64.7
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCC--CCCCCCC-c---c---cHHHHHHHHHHHHHH------
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGY--GESDPNP-R---R---TVKSEAFDIVELADQ------ 123 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--G~S~~~~-~---~---~~~~~~~~l~~~l~~------ 123 (346)
..|.||+-||.+.....|..+++.+++. ||-|.++|.+|- |...... . + -+.+-..|+..+|+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~-Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASY-GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhC-ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 4689999999999999999999999876 999999999984 4333211 0 1 122333333333322
Q ss_pred -------cCCCCeEEEEEEccChHHHHHhHhhccC
Q 037354 124 -------LQLGSKFYVIGVSIGSYPTWSCLKYIPH 151 (346)
Q Consensus 124 -------l~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 151 (346)
++. .+|.++|||+||+.+++++....+
T Consensus 149 sP~l~~~ld~-~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 149 SPALAGRLDP-QRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred CcccccccCc-cceEEEecccccHHHHHhcccccc
Confidence 234 589999999999999998876543
No 138
>PRK04940 hypothetical protein; Provisional
Probab=98.96 E-value=6.5e-08 Score=72.13 Aligned_cols=86 Identities=19% Similarity=0.200 Sum_probs=51.8
Q ss_pred EEEEcCCCCCCcc--cccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHc---CCCCeEEEEEEcc
Q 037354 63 IVLVHGFGSSKEM--NFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQL---QLGSKFYVIGVSI 137 (346)
Q Consensus 63 vl~lhG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~lvGhS~ 137 (346)
||++||+.++... ... ..+. .+.+|.+-+-.+. .+..+-.+.+.++++.+ +..+++.+||.|+
T Consensus 2 IlYlHGF~SS~~S~~~Ka--~~l~------~~~p~~~~~~l~~----~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKV--LQLQ------FIDPDVRLISYST----LHPKHDMQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCCccHHHH--Hhhe------eeCCCCeEEECCC----CCHHHHHHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 7899999998876 321 1111 1122322221111 13333344444444431 1114789999999
Q ss_pred ChHHHHHhHhhccCceeeeEEecccC
Q 037354 138 GSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 138 Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
||+.|..++.++. -..||++|..
T Consensus 70 GGyyA~~La~~~g---~~aVLiNPAv 92 (180)
T PRK04940 70 GGYWAERIGFLCG---IRQVIFNPNL 92 (180)
T ss_pred HHHHHHHHHHHHC---CCEEEECCCC
Confidence 9999999999976 3678999975
No 139
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.95 E-value=6.1e-08 Score=82.62 Aligned_cols=76 Identities=14% Similarity=0.186 Sum_probs=59.5
Q ss_pred CeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcC---CC-CeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 88 GIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQ---LG-SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 88 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~---~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
|.-|+.+.+. ..+.+..++++......++++.+. .+ .+.+++|.|.||+.++.+|+.+|+.+.-+|+.+++.
T Consensus 100 GHPvYFV~F~----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 100 GHPVYFVGFF----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred CCCeEEEEec----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 7777776653 334446688988888777776652 11 389999999999999999999999999999999888
Q ss_pred CCCC
Q 037354 164 NYEW 167 (346)
Q Consensus 164 ~~~~ 167 (346)
+++.
T Consensus 176 sywa 179 (581)
T PF11339_consen 176 SYWA 179 (581)
T ss_pred cccc
Confidence 7744
No 140
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.93 E-value=1.7e-08 Score=79.86 Aligned_cols=95 Identities=14% Similarity=0.031 Sum_probs=69.9
Q ss_pred EEcCCC--CCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHH-cCCCCeEEEEEEccChHH
Q 037354 65 LVHGFG--SSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQ-LQLGSKFYVIGVSIGSYP 141 (346)
Q Consensus 65 ~lhG~~--~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~lvGhS~Gg~~ 141 (346)
++|+.+ ++...|..+...+... +.|+++|.+|++.+... ..+.+++++.+...+.. ... .+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~--~~v~~~~~~g~~~~~~~-~~~~~~~~~~~~~~l~~~~~~-~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR--RDVSALPLPGFGPGEPL-PASADALVEAQAEAVLRAAGG-RPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC--ccEEEecCCCCCCCCCC-CCCHHHHHHHHHHHHHHhcCC-CCeEEEEECHHHHH
Confidence 455544 5566788888888764 67999999999876543 34677777766555443 344 68999999999999
Q ss_pred HHHhHhh---ccCceeeeEEecccC
Q 037354 142 TWSCLKY---IPHRLAGVALIVPTI 163 (346)
Q Consensus 142 a~~~a~~---~p~~v~~lil~~~~~ 163 (346)
+..++.. .++.+.+++++++..
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCC
Confidence 9888875 356799999988753
No 141
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.90 E-value=6.9e-09 Score=89.66 Aligned_cols=90 Identities=12% Similarity=0.034 Sum_probs=68.8
Q ss_pred CCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc---ccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHh
Q 037354 71 SSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR---RTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLK 147 (346)
Q Consensus 71 ~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 147 (346)
.....|..+++.|.+. || +...|++|+|.+-+... ..++++.+.++++.+..+. ++++|+||||||.+++.++.
T Consensus 105 ~~~~~~~~li~~L~~~-GY-~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~-~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 105 DEVYYFHDMIEQLIKW-GY-KEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG-KKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred chHHHHHHHHHHHHHc-CC-ccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC-CCEEEEEECHhHHHHHHHHH
Confidence 4457788999999876 87 55899999999876431 1344555555555556666 69999999999999999998
Q ss_pred hccC----ceeeeEEecccC
Q 037354 148 YIPH----RLAGVALIVPTI 163 (346)
Q Consensus 148 ~~p~----~v~~lil~~~~~ 163 (346)
.+|+ .|+++|+++++.
T Consensus 182 ~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HCCHhHHhHhccEEEECCCC
Confidence 8886 478899998764
No 142
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.89 E-value=1.4e-07 Score=76.55 Aligned_cols=123 Identities=18% Similarity=0.163 Sum_probs=87.9
Q ss_pred cceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCccc------ccchHHHHHhcCeEEEEECCCCCCCCCCCCccc
Q 037354 36 AARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMN------FPASQELIESLGIYFVLYDRAGYGESDPNPRRT 109 (346)
Q Consensus 36 ~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~------~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~ 109 (346)
+-.+.. |+..+--....-+..++...||++-|.++..+.. +..+..+++..+-+|+.+++||.|.|.... +
T Consensus 114 Rv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~--s 190 (365)
T PF05677_consen 114 RVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP--S 190 (365)
T ss_pred eEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--C
Confidence 334555 7877776666544445678999999999876652 245667777778889999999999998765 4
Q ss_pred HHHHHHHHHHHHHHcC-----C-CCeEEEEEEccChHHHHHhHhhcc----CceeeeEEecc
Q 037354 110 VKSEAFDIVELADQLQ-----L-GSKFYVIGVSIGSYPTWSCLKYIP----HRLAGVALIVP 161 (346)
Q Consensus 110 ~~~~~~~l~~~l~~l~-----~-~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lil~~~ 161 (346)
.++++.|-.+.++.|. + .+.+++.|||+||.++..++..+. +.|+=+++-+-
T Consensus 191 ~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDR 252 (365)
T PF05677_consen 191 RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDR 252 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecC
Confidence 6888887776666652 2 268999999999999988666542 23444454443
No 143
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.88 E-value=5.8e-09 Score=81.24 Aligned_cols=85 Identities=19% Similarity=0.111 Sum_probs=51.7
Q ss_pred eEEEEEcCCCC-CCcccccchHHHHHhcCeE---EEEECCCCCCCCCCCCc-----ccHHHHHHHHHHHHHHcCCCCeEE
Q 037354 61 YRIVLVHGFGS-SKEMNFPASQELIESLGIY---FVLYDRAGYGESDPNPR-----RTVKSEAFDIVELADQLQLGSKFY 131 (346)
Q Consensus 61 ~~vl~lhG~~~-~~~~~~~~~~~l~~~~g~~---vi~~D~~G~G~S~~~~~-----~~~~~~~~~l~~~l~~l~~~~~~~ 131 (346)
.||||+||.++ ....|..+.+.|.++ ||. |+++++-....+..... .+..++++-|.+++++-+ .+|.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG--akVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG--AKVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT----EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHc-CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhC--CEEE
Confidence 48999999998 678899999999887 999 79999844433221111 122344444445555556 3999
Q ss_pred EEEEccChHHHHHhHhh
Q 037354 132 VIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 132 lvGhS~Gg~~a~~~a~~ 148 (346)
||||||||.++-.+...
T Consensus 79 IVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEETCHHHHHHHHHHH
T ss_pred EEEcCCcCHHHHHHHHH
Confidence 99999999999887753
No 144
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.86 E-value=2.1e-09 Score=89.73 Aligned_cols=102 Identities=16% Similarity=0.210 Sum_probs=65.1
Q ss_pred CCCeEEEEEcCCCCCC--cccc-cchHHHHHh--cCeEEEEECCCCCCCCCCCCcc-----cHHHHHHHHHHHHHHc---
Q 037354 58 ESNYRIVLVHGFGSSK--EMNF-PASQELIES--LGIYFVLYDRAGYGESDPNPRR-----TVKSEAFDIVELADQL--- 124 (346)
Q Consensus 58 ~~~~~vl~lhG~~~~~--~~~~-~~~~~l~~~--~g~~vi~~D~~G~G~S~~~~~~-----~~~~~~~~l~~~l~~l--- 124 (346)
.++|++|++|||..+. ..|. .+...+... .++.||++||...- +. .| ......+.|..+|+.|
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a-~~---~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGA-SN---NYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHH-SS----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhc-cc---cccchhhhHHHHHHHHHHHHHHHHhh
Confidence 4689999999999887 3454 444545544 47899999995321 11 22 3344444444444433
Q ss_pred ---CCCCeEEEEEEccChHHHHHhHhhccC--ceeeeEEecccCC
Q 037354 125 ---QLGSKFYVIGVSIGSYPTWSCLKYIPH--RLAGVALIVPTIN 164 (346)
Q Consensus 125 ---~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lil~~~~~~ 164 (346)
.. +++++||||+||++|-.++..... +|..|+.++|+..
T Consensus 145 ~g~~~-~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 145 FGVPP-ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp H---G-GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred cCCCh-hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 34 699999999999999999888777 8999999999864
No 145
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.85 E-value=4.6e-08 Score=77.51 Aligned_cols=127 Identities=19% Similarity=0.224 Sum_probs=91.6
Q ss_pred cceeecCCCceEEEEEcCCCCC-CCCeEEEEEcCCCCCCcccccch--HHHHHhcCeEEEEECC-C------CCCCCCCC
Q 037354 36 AARIRLSDGRYLAYREKGVSKI-ESNYRIVLVHGFGSSKEMNFPAS--QELIESLGIYFVLYDR-A------GYGESDPN 105 (346)
Q Consensus 36 ~~~~~~~~g~~l~~~~~g~~~~-~~~~~vl~lhG~~~~~~~~~~~~--~~l~~~~g~~vi~~D~-~------G~G~S~~~ 105 (346)
...+.. +|.+..|+.+-++.. ++.|.||.+||-.++...++... ..++++.||-|+.+|- + +.|.+..+
T Consensus 37 ~~s~~~-~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p 115 (312)
T COG3509 37 VASFDV-NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGP 115 (312)
T ss_pred cccccc-CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCc
Confidence 344555 788888888766542 34578999999999988777554 7888888999998852 1 22333222
Q ss_pred Cc-----ccHHHHHHHHHHHHHHcCCC-CeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 106 PR-----RTVKSEAFDIVELADQLQLG-SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 106 ~~-----~~~~~~~~~l~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
.+ .+...+.+.+..++.+.+++ .+|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 21 13444455555666666662 489999999999999999999999999999988764
No 146
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.82 E-value=7.9e-07 Score=77.90 Aligned_cols=129 Identities=15% Similarity=0.117 Sum_probs=92.4
Q ss_pred ccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCc---ccc--cchH---HHHHhcCeEEEEECCCCCCCCCCCC
Q 037354 35 DAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKE---MNF--PASQ---ELIESLGIYFVLYDRAGYGESDPNP 106 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~---~~~--~~~~---~l~~~~g~~vi~~D~~G~G~S~~~~ 106 (346)
....+++.||++|+...+-+.+.++.|+++..+-++-... .+. ...+ .++.+ ||.||..|.||.|.|+..-
T Consensus 20 ~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~-GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 20 RDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQ-GYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred eeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecC-ceEEEEecccccccCCccc
Confidence 3457888899999999998877677899999882222222 111 1122 34444 9999999999999998754
Q ss_pred cc--c-HHHHHHHHHHHHHHcCC-CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 107 RR--T-VKSEAFDIVELADQLQL-GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 107 ~~--~-~~~~~~~l~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
.. + -.+-.-|+.+.+..... +.+|..+|.|++|...+.+|+..|..+++++...+..+
T Consensus 99 ~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 99 DPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 32 3 11223355555555433 24899999999999999999999999999998887654
No 147
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.81 E-value=2.4e-08 Score=79.45 Aligned_cols=104 Identities=20% Similarity=0.324 Sum_probs=68.8
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCe--EEEEECCCCCCCCCCC--CcccHHHHHHHHHHHHHHc----CCCCeE
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGI--YFVLYDRAGYGESDPN--PRRTVKSEAFDIVELADQL----QLGSKF 130 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~--~vi~~D~~G~G~S~~~--~~~~~~~~~~~l~~~l~~l----~~~~~~ 130 (346)
.+..+||+||+..+-..-...+.++....++ .++.+.||..|.-..- ...+...-..++..+++.+ +. ++|
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~-~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI-KRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC-ceE
Confidence 5779999999998855443334445544444 6999999988863211 1113333344445555443 45 799
Q ss_pred EEEEEccChHHHHHhHhh----cc-----CceeeeEEecccC
Q 037354 131 YVIGVSIGSYPTWSCLKY----IP-----HRLAGVALIVPTI 163 (346)
Q Consensus 131 ~lvGhS~Gg~~a~~~a~~----~p-----~~v~~lil~~~~~ 163 (346)
++++||||+.+.+.+... .+ .++..+||++|-.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 999999999999886543 11 3688999999864
No 148
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.80 E-value=1.7e-07 Score=77.31 Aligned_cols=59 Identities=27% Similarity=0.293 Sum_probs=42.7
Q ss_pred CCcEEEEecCCCCCCchhHHHHHHHhc-----CCceEEEecCCCcceee-c-cchhHHHHHHHhhc
Q 037354 277 ESSVHIWQGYEDKVVPFQLQRFISRKL-----SWIKYHEVRDGGHLILH-Y-NGMCDYFLRALLVG 335 (346)
Q Consensus 277 ~~Pvlii~G~~D~~~~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~-e-~~~~~~~i~~fl~~ 335 (346)
++|+++.+|..|.++|....+.+.+.+ .+++++.+++.+|.... . .......|.+=|+.
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFAG 284 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHCC
Confidence 556999999999999998886666554 35778888999998764 2 44444555554444
No 149
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.75 E-value=1.3e-06 Score=67.68 Aligned_cols=103 Identities=14% Similarity=0.162 Sum_probs=74.2
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCe----EEEEECCCCC----CCCCCCC------------cccHHHHHHHHHH
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGI----YFVLYDRAGY----GESDPNP------------RRTVKSEAFDIVE 119 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~----~vi~~D~~G~----G~S~~~~------------~~~~~~~~~~l~~ 119 (346)
.-|.||+||.+++......++.+|...+.. -++..|--|- |.-++.. ..+..++..++..
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 358899999999999999888888876311 1555665552 2111111 1256677777777
Q ss_pred HHHHc----CCCCeEEEEEEccChHHHHHhHhhccC-----ceeeeEEecccC
Q 037354 120 LADQL----QLGSKFYVIGVSIGSYPTWSCLKYIPH-----RLAGVALIVPTI 163 (346)
Q Consensus 120 ~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lil~~~~~ 163 (346)
++..| ++ .++.+|||||||.-...|+..+.+ .++.+|.+++..
T Consensus 125 ~msyL~~~Y~i-~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 125 AMSYLQKHYNI-PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHHhcCC-ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 76655 67 699999999999999999887653 489999998864
No 150
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.71 E-value=3.4e-06 Score=74.28 Aligned_cols=128 Identities=19% Similarity=0.123 Sum_probs=83.2
Q ss_pred cccceeecC--CCceEEEEEcCCCC-CCCCeEEEEEcCCCCCCcccccch-------------------HHHHHhcCeEE
Q 037354 34 VDAARIRLS--DGRYLAYREKGVSK-IESNYRIVLVHGFGSSKEMNFPAS-------------------QELIESLGIYF 91 (346)
Q Consensus 34 ~~~~~~~~~--~g~~l~~~~~g~~~-~~~~~~vl~lhG~~~~~~~~~~~~-------------------~~l~~~~g~~v 91 (346)
....++.+. .+..|+|+.+...+ .+.+|.||++.|.++++..+..+. ..+.+ ...+
T Consensus 11 ~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~--~an~ 88 (415)
T PF00450_consen 11 QYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK--FANL 88 (415)
T ss_dssp EEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG--TSEE
T ss_pred EEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc--ccce
Confidence 355567775 67889998876543 356899999999999887663111 01122 2569
Q ss_pred EEECCC-CCCCCCCCCc----ccHHHHHHHHHHHHHHc-------CCCCeEEEEEEccChHHHHHhHhh----c------
Q 037354 92 VLYDRA-GYGESDPNPR----RTVKSEAFDIVELADQL-------QLGSKFYVIGVSIGSYPTWSCLKY----I------ 149 (346)
Q Consensus 92 i~~D~~-G~G~S~~~~~----~~~~~~~~~l~~~l~~l-------~~~~~~~lvGhS~Gg~~a~~~a~~----~------ 149 (346)
+.+|.| |.|.|..... .+.++.++++.++|..+ .- .+++|.|-|+||..+-.+|.. .
T Consensus 89 l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~-~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~ 167 (415)
T PF00450_consen 89 LFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRS-NPLYIAGESYGGHYVPALASYILQQNKKGDQP 167 (415)
T ss_dssp EEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTT-SEEEEEEETTHHHHHHHHHHHHHHHTCC--ST
T ss_pred EEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccC-CCEEEEccccccccchhhHHhhhhcccccccc
Confidence 999966 9999965432 26788888887777654 22 599999999999987665542 2
Q ss_pred cCceeeeEEecccCC
Q 037354 150 PHRLAGVALIVPTIN 164 (346)
Q Consensus 150 p~~v~~lil~~~~~~ 164 (346)
+-.++|+++.++..+
T Consensus 168 ~inLkGi~IGng~~d 182 (415)
T PF00450_consen 168 KINLKGIAIGNGWID 182 (415)
T ss_dssp TSEEEEEEEESE-SB
T ss_pred ccccccceecCcccc
Confidence 235889999999865
No 151
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.67 E-value=6.3e-07 Score=69.07 Aligned_cols=80 Identities=18% Similarity=0.205 Sum_probs=54.3
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccCh
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGS 139 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg 139 (346)
+..|||..||+++...+..+.. ...+++ ++++|+|-.- ++. | .-+. +.+.|||+|||-
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~--~~~~D~-l~~yDYr~l~---------~d~---~------~~~y-~~i~lvAWSmGV 68 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL--PENYDV-LICYDYRDLD---------FDF---D------LSGY-REIYLVAWSMGV 68 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC--CCCccE-EEEecCcccc---------ccc---c------cccC-ceEEEEEEeHHH
Confidence 4699999999999988765521 222233 6678887322 110 1 1234 699999999999
Q ss_pred HHHHHhHhhccCceeeeEEecccC
Q 037354 140 YPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 140 ~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
++|..+.... .+...|.+++.+
T Consensus 69 w~A~~~l~~~--~~~~aiAINGT~ 90 (213)
T PF04301_consen 69 WAANRVLQGI--PFKRAIAINGTP 90 (213)
T ss_pred HHHHHHhccC--CcceeEEEECCC
Confidence 9998876654 367777777754
No 152
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.63 E-value=3.5e-06 Score=63.85 Aligned_cols=98 Identities=20% Similarity=0.304 Sum_probs=74.1
Q ss_pred CeEEEEEcCCCCCCcc---cccchHHHHHhcCeEEEEECCC----CCCCCCCCCcccHHHHHHHHHHHHHHcCCC---Ce
Q 037354 60 NYRIVLVHGFGSSKEM---NFPASQELIESLGIYFVLYDRA----GYGESDPNPRRTVKSEAFDIVELADQLQLG---SK 129 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~---~~~~~~~l~~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~---~~ 129 (346)
+.-|||+-|++..--. -.++...|.+. +|.++.+-.+ |+|- .++++-++||..++++++.. .+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~-~wslVq~q~~Ssy~G~Gt------~slk~D~edl~~l~~Hi~~~~fSt~ 108 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDEN-SWSLVQPQLRSSYNGYGT------FSLKDDVEDLKCLLEHIQLCGFSTD 108 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhc-cceeeeeecccccccccc------ccccccHHHHHHHHHHhhccCcccc
Confidence 4689999998876433 23555666655 8998888765 3333 37888899999999988642 48
Q ss_pred EEEEEEccChHHHHHhHh--hccCceeeeEEecccCC
Q 037354 130 FYVIGVSIGSYPTWSCLK--YIPHRLAGVALIVPTIN 164 (346)
Q Consensus 130 ~~lvGhS~Gg~~a~~~a~--~~p~~v~~lil~~~~~~ 164 (346)
++|+|||.|+.=.+.|.. ..+..|++.|+.+|..+
T Consensus 109 vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred eEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 999999999998888773 34678999999998754
No 153
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.63 E-value=1.2e-06 Score=65.72 Aligned_cols=119 Identities=15% Similarity=0.170 Sum_probs=79.4
Q ss_pred ceEEEEEcCCCC---CCCCeEEEEEcCCCCCCcccc--cchHHHHHhcCeEEEEECCC--CC---CCCCCCC--------
Q 037354 45 RYLAYREKGVSK---IESNYRIVLVHGFGSSKEMNF--PASQELIESLGIYFVLYDRA--GY---GESDPNP-------- 106 (346)
Q Consensus 45 ~~l~~~~~g~~~---~~~~~~vl~lhG~~~~~~~~~--~~~~~l~~~~g~~vi~~D~~--G~---G~S~~~~-------- 106 (346)
..|.+-.+-++. ++.-|+|.++.|+.++.+.+- ...+..+.++|+.|+++|-- |. |.++...
T Consensus 26 c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFY 105 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFY 105 (283)
T ss_pred cceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeE
Confidence 345555554443 234689999999999988764 44566677789999999954 43 2222100
Q ss_pred ----------cccH-HHHHHHHHHHHHH----cCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 107 ----------RRTV-KSEAFDIVELADQ----LQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 107 ----------~~~~-~~~~~~l~~~l~~----l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
.+.+ +-+.+.+.+++.. ++. .++.+.||||||.=|+..+.+.|.+.+++-..+|.++
T Consensus 106 vnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~-~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 106 VNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDP-LKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred EecccchHhhhhhHHHHHHHHHHHHhccccccccc-hhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 0112 2223345555542 234 4799999999999999999999999998888887654
No 154
>PLN02606 palmitoyl-protein thioesterase
Probab=98.62 E-value=3e-06 Score=68.49 Aligned_cols=99 Identities=19% Similarity=0.231 Sum_probs=63.0
Q ss_pred CeEEEEEcCCC--CCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcc--cHHHHHHHHHHHHHHcC-CCCeEEEEE
Q 037354 60 NYRIVLVHGFG--SSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRR--TVKSEAFDIVELADQLQ-LGSKFYVIG 134 (346)
Q Consensus 60 ~~~vl~lhG~~--~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~l~~~l~~l~-~~~~~~lvG 134 (346)
..|||+.||++ ++...+..+.+.+.+.-+..+.++- .|-+. ...+ .+.+.++.+.+.+.... +.+-++++|
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naIG 101 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELSEGYNIVA 101 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhcCceEEEE
Confidence 46999999999 4444565665555322133333333 23221 1111 44555555544443321 124699999
Q ss_pred EccChHHHHHhHhhccC--ceeeeEEeccc
Q 037354 135 VSIGSYPTWSCLKYIPH--RLAGVALIVPT 162 (346)
Q Consensus 135 hS~Gg~~a~~~a~~~p~--~v~~lil~~~~ 162 (346)
+|.||.++-.++.++|+ .|+.+|.+++.
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 99999999999999987 59999999975
No 155
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.60 E-value=5.1e-07 Score=72.87 Aligned_cols=121 Identities=18% Similarity=0.241 Sum_probs=78.8
Q ss_pred eeecCCCceEE---EEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc-ccHHHH
Q 037354 38 RIRLSDGRYLA---YREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR-RTVKSE 113 (346)
Q Consensus 38 ~~~~~~g~~l~---~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~ 113 (346)
.++..||.+|. ....++..+.....|+|+-|..+..+. ..+..-.+ .||.|+.++.||++.|...+- .....-
T Consensus 218 kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~~-lgYsvLGwNhPGFagSTG~P~p~n~~nA 294 (517)
T KOG1553|consen 218 KIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPAQ-LGYSVLGWNHPGFAGSTGLPYPVNTLNA 294 (517)
T ss_pred EEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChHH-hCceeeccCCCCccccCCCCCcccchHH
Confidence 34444554433 222222222235677777777655332 22233333 389999999999999986553 233444
Q ss_pred HHHHHHH-HHHcCCC-CeEEEEEEccChHHHHHhHhhccCceeeeEEeccc
Q 037354 114 AFDIVEL-ADQLQLG-SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 114 ~~~l~~~-l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~ 162 (346)
++.+.++ |..|+.. +.+++.|+|.||..+..+|..||+ |+++||-+++
T Consensus 295 ~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 295 ADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 4444444 4666642 689999999999999999999997 9999988764
No 156
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.59 E-value=7.3e-06 Score=63.88 Aligned_cols=237 Identities=12% Similarity=0.072 Sum_probs=124.4
Q ss_pred CeEEEEEcCCCCCCcccc-cchHHHHHhcCeEEEEECCCCCCCCCCCCcc-cHHHHHHH--------HHHHHHH------
Q 037354 60 NYRIVLVHGFGSSKEMNF-PASQELIESLGIYFVLYDRAGYGESDPNPRR-TVKSEAFD--------IVELADQ------ 123 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~-~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~--------l~~~l~~------ 123 (346)
++.-|++.|-+.....-. .+...+.++ +...+.+.-|-+|...++... +.-+.+.| |.+..+.
T Consensus 113 ~~KOG~~a~tgdh~y~rr~~L~~p~~k~-~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~ 191 (371)
T KOG1551|consen 113 ADLCLSWALTGDHVYTRRLVLSKPINKR-EIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSA 191 (371)
T ss_pred CCeeEEEeecCCceeEeeeeecCchhhh-cchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccc
Confidence 444555555555543333 234455555 777899999999988765432 22222233 2222222
Q ss_pred cCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCCCCCCCCcchhhHHHhhhhhhhHHHHHhhchhhhHHHHh
Q 037354 124 LQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINYEWPSLPQSLIRTDYRRRLIQWSLWIAKHIPGLLYWWIS 203 (346)
Q Consensus 124 l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (346)
.|. .++.++|-||||.+|......++..|.-+=.+++... ............ ...+
T Consensus 192 ~g~-g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~a------svs~teg~l~~~----~s~~------------- 247 (371)
T KOG1551|consen 192 DGL-GNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKA------SVSATEGLLLQD----TSKM------------- 247 (371)
T ss_pred cCc-ccceeeeeecccHHHHhhcccCCCCcccccccccccc------chhhhhhhhhhh----hHHH-------------
Confidence 356 4899999999999999999988877766555554321 111000000000 0000
Q ss_pred hhcCCCcccccCCCccCccccHHHHhhhcCCCCcchhhhhhhhHHHHhhhhhhhhcCCCCCCCCCCCCCCCCCCCcEEEE
Q 037354 204 QKVVPSTSVLERNPVYFSDRDIEVLKTTKGFPMLTQDKLQDRSVFYALRGDVVAAFGDWGFDPVRLSNPFPHNESSVHIW 283 (346)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~i~~Pvlii 283 (346)
+++........ ..............+...+ +.......+......+.. +......| .-..=+.++
T Consensus 248 ~~~~~~t~~~~-~~~r~p~Q~~~~~~~~~sr----n~~~E~~~~Mr~vmd~~T--------~v~~fp~P--vdpsl~ivv 312 (371)
T KOG1551|consen 248 KRFNQTTNKSG-YTSRNPAQSYHLLSKEQSR----NSRKESLIFMRGVMDECT--------HVANFPVP--VDPSLIIVV 312 (371)
T ss_pred HhhccCcchhh-hhhhCchhhHHHHHHHhhh----cchHHHHHHHHHHHHhhc--------hhhcCCCC--CCCCeEEEE
Confidence 00000000000 0000000000000000000 001111111122221111 11222233 222227888
Q ss_pred ecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceee-c-cchhHHHHHHHhhccc
Q 037354 284 QGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILH-Y-NGMCDYFLRALLVGEE 337 (346)
Q Consensus 284 ~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e-~~~~~~~i~~fl~~~~ 337 (346)
.+++|..+|...+..+.+..|++++..++ +||..-+ - .+.+...|.+-|++++
T Consensus 313 ~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 313 QAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 99999999998889999999999999999 6998766 4 8999999999998765
No 157
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.56 E-value=2.7e-07 Score=77.87 Aligned_cols=100 Identities=21% Similarity=0.221 Sum_probs=77.2
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeE---EEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEc
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIY---FVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVS 136 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS 136 (346)
.-+++++||++.....|..+...+... |+. ++.+++++. .......-..+.+...+.+++...+. +++.++|||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~-~~~~~~~~~~~ql~~~V~~~l~~~ga-~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAIL-GWLTNGVYAFELSGG-DGTYSLAVRGEQLFAYVDEVLAKTGA-KKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcch-HHHhccccccccccc-CCCccccccHHHHHHHHHHHHhhcCC-CceEEEeec
Confidence 449999999988888887765554433 555 888888765 22222233566667777778888887 799999999
Q ss_pred cChHHHHHhHhhcc--CceeeeEEeccc
Q 037354 137 IGSYPTWSCLKYIP--HRLAGVALIVPT 162 (346)
Q Consensus 137 ~Gg~~a~~~a~~~p--~~v~~lil~~~~ 162 (346)
|||..+..++...+ .+|+.++.+++.
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccC
Confidence 99999999999888 799999999975
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=98.51 E-value=4.9e-06 Score=60.15 Aligned_cols=90 Identities=19% Similarity=0.236 Sum_probs=67.4
Q ss_pred EEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHH
Q 037354 63 IVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPT 142 (346)
Q Consensus 63 vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a 142 (346)
||++||+.++....... +..+ .+..|.|-.+.|.+....+....++.+..++..++- +...++|.|+||..|
T Consensus 2 ilYlHGFnSSP~shka~---l~~q----~~~~~~~~i~y~~p~l~h~p~~a~~ele~~i~~~~~-~~p~ivGssLGGY~A 73 (191)
T COG3150 2 ILYLHGFNSSPGSHKAV---LLLQ----FIDEDVRDIEYSTPHLPHDPQQALKELEKAVQELGD-ESPLIVGSSLGGYYA 73 (191)
T ss_pred eEEEecCCCCcccHHHH---HHHH----HHhccccceeeecCCCCCCHHHHHHHHHHHHHHcCC-CCceEEeecchHHHH
Confidence 89999999987776532 2222 234455556666666667899999999999999986 579999999999999
Q ss_pred HHhHhhccCceeeeEEecccC
Q 037354 143 WSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 143 ~~~a~~~p~~v~~lil~~~~~ 163 (346)
..++.++. ++ .|+++|..
T Consensus 74 t~l~~~~G--ir-av~~NPav 91 (191)
T COG3150 74 TWLGFLCG--IR-AVVFNPAV 91 (191)
T ss_pred HHHHHHhC--Ch-hhhcCCCc
Confidence 99999865 33 35567754
No 159
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.48 E-value=4.3e-07 Score=71.81 Aligned_cols=89 Identities=18% Similarity=0.119 Sum_probs=50.8
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHh-cCeEEEEECCCCCCCCCCCCcccHHH----HHHHHHHHHHHcCCC-CeEEE
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIES-LGIYFVLYDRAGYGESDPNPRRTVKS----EAFDIVELADQLQLG-SKFYV 132 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~----~~~~l~~~l~~l~~~-~~~~l 132 (346)
+.-.|||+||+.++...|..+...+... ..+.-..+...++.........+++. ++++|.+.++..... .++.+
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Isf 82 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISF 82 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceE
Confidence 4568999999999999998776666651 01111111222222111111224444 444444444444431 48999
Q ss_pred EEEccChHHHHHhHh
Q 037354 133 IGVSIGSYPTWSCLK 147 (346)
Q Consensus 133 vGhS~Gg~~a~~~a~ 147 (346)
|||||||.++-.+..
T Consensus 83 IgHSLGGli~r~al~ 97 (217)
T PF05057_consen 83 IGHSLGGLIARYALG 97 (217)
T ss_pred EEecccHHHHHHHHH
Confidence 999999999865544
No 160
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.44 E-value=9.3e-05 Score=61.74 Aligned_cols=102 Identities=16% Similarity=0.110 Sum_probs=66.2
Q ss_pred CCeEEEEEcCCCCCCccc---ccchHHHHHhcCeEEEEECCCC--CCCCC-------------------CCCc-------
Q 037354 59 SNYRIVLVHGFGSSKEMN---FPASQELIESLGIYFVLYDRAG--YGESD-------------------PNPR------- 107 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~---~~~~~~l~~~~g~~vi~~D~~G--~G~S~-------------------~~~~------- 107 (346)
....||++||.+.+...- .++-..|.+ +||.++++..|. ...+. ....
T Consensus 86 ~~G~vIilp~~g~~~d~p~~i~~LR~~L~~-~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 164 (310)
T PF12048_consen 86 PQGAVIILPDWGEHPDWPGLIAPLRRELPD-HGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQ 164 (310)
T ss_pred CceEEEEecCCCCCCCcHhHHHHHHHHhhh-cCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccccc
Confidence 567999999999987532 244445544 499999988887 11000 0000
Q ss_pred --ccH----HHHHHHHHHHH---HHcCCCCeEEEEEEccChHHHHHhHhhccC-ceeeeEEeccc
Q 037354 108 --RTV----KSEAFDIVELA---DQLQLGSKFYVIGVSIGSYPTWSCLKYIPH-RLAGVALIVPT 162 (346)
Q Consensus 108 --~~~----~~~~~~l~~~l---~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lil~~~~ 162 (346)
... ..+..-|.+++ ...+. ++++|+||+.|+.+++.+....+. .++++|+|++.
T Consensus 165 ~~~~~~~~~~~~~ari~Aa~~~~~~~~~-~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 165 EAEAREAYEERLFARIEAAIAFAQQQGG-KNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred HhHHhHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 001 12222233333 33344 569999999999999999887764 59999999985
No 161
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.41 E-value=1.1e-06 Score=60.20 Aligned_cols=60 Identities=18% Similarity=0.270 Sum_probs=54.9
Q ss_pred CCcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhhcc
Q 037354 277 ESSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGE 336 (346)
Q Consensus 277 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 336 (346)
..|+|++.++.|+++|.+.++.+++.+++++++++++.||..+.. ...+.+.+.+||..-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 467999999999999999999999999999999999999999866 777899999999753
No 162
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.39 E-value=8.1e-07 Score=72.43 Aligned_cols=105 Identities=11% Similarity=0.084 Sum_probs=64.5
Q ss_pred CCeEEEEEcCCCCCCcccc--cchHHHHHhcC---eEEEEECCCCCCCC--CC----------CCc---ccHH-HHHHHH
Q 037354 59 SNYRIVLVHGFGSSKEMNF--PASQELIESLG---IYFVLYDRAGYGES--DP----------NPR---RTVK-SEAFDI 117 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~--~~~~~l~~~~g---~~vi~~D~~G~G~S--~~----------~~~---~~~~-~~~~~l 117 (346)
.-|+|+++||.......+. ..+..+..+.+ .-+|+++..+.+.. .. ... ..+. -+.++|
T Consensus 23 ~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el 102 (251)
T PF00756_consen 23 PYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEEL 102 (251)
T ss_dssp TEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHH
T ss_pred CCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccc
Confidence 5689999999722222221 23333444421 34666666555511 00 001 1223 344566
Q ss_pred HHHHHH-cCCC-CeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 118 VELADQ-LQLG-SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 118 ~~~l~~-l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
...|+. +... ++..++|+||||..|+.++.+||+.+.+++.++|..
T Consensus 103 ~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 103 IPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred hhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 666644 3331 227999999999999999999999999999999874
No 163
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.38 E-value=4.5e-06 Score=66.72 Aligned_cols=100 Identities=14% Similarity=0.133 Sum_probs=69.1
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCC------CC--Cc-----------------c-----
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESD------PN--PR-----------------R----- 108 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~------~~--~~-----------------~----- 108 (346)
.-|.|||-||++++...|..+.-.|+.+ ||-|.+++.|-+-.+- .+ +. .
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LASh-G~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASH-GFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhC-ceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 4589999999999999999999999876 9999999998765331 10 00 0
Q ss_pred ----cHHHHHHHHHHHHHHc------------------------CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEec
Q 037354 109 ----TVKSEAFDIVELADQL------------------------QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIV 160 (346)
Q Consensus 109 ----~~~~~~~~l~~~l~~l------------------------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~ 160 (346)
...+.... ..+++.+ +. .++.++|||+||..++...+.+ .+++..|+++
T Consensus 196 qv~~R~~Ec~~a-L~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~-s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD 272 (399)
T KOG3847|consen 196 QVGQRAQECQKA-LKILEQINDGGTPDNVLPGNNSDLEQLKGNLDT-SQAAVIGHSFGGATSIASSSSH-TDFRCAIALD 272 (399)
T ss_pred HHHHHHHHHHHH-HHHHHHhhcCCCchhcccCccccHHHHhcchhh-hhhhheeccccchhhhhhhccc-cceeeeeeee
Confidence 01111111 1222222 12 4688999999999998777764 4689999888
Q ss_pred cc
Q 037354 161 PT 162 (346)
Q Consensus 161 ~~ 162 (346)
.+
T Consensus 273 ~W 274 (399)
T KOG3847|consen 273 AW 274 (399)
T ss_pred ee
Confidence 76
No 164
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.37 E-value=2.7e-06 Score=75.08 Aligned_cols=106 Identities=19% Similarity=0.174 Sum_probs=72.5
Q ss_pred CCeEEEEEcCCCCCCccc--ccchHHHHHhcCeEEEEECCCCCCCCCCCCc--------ccHHHHHHHHHHHHHHcC---
Q 037354 59 SNYRIVLVHGFGSSKEMN--FPASQELIESLGIYFVLYDRAGYGESDPNPR--------RTVKSEAFDIVELADQLQ--- 125 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~--~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--------~~~~~~~~~l~~~l~~l~--- 125 (346)
++|++|++.|=+.-...+ ..++..|++++|=.+++++.|.+|.|.+..+ .+.++..+|+..+++++.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 367777775544332222 2466788888888899999999999986432 278888888888887653
Q ss_pred ---CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 126 ---LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 126 ---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
...+++++|-|+||.+|.-+-.+||+.|.+.+.-+++..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 124899999999999999999999999999998877653
No 165
>PLN02209 serine carboxypeptidase
Probab=98.37 E-value=2.4e-05 Score=68.26 Aligned_cols=129 Identities=19% Similarity=0.218 Sum_probs=79.7
Q ss_pred cccceeecCC--CceEEEEEcCCCC-CCCCeEEEEEcCCCCCCcccccch----------------H-------HHHHhc
Q 037354 34 VDAARIRLSD--GRYLAYREKGVSK-IESNYRIVLVHGFGSSKEMNFPAS----------------Q-------ELIESL 87 (346)
Q Consensus 34 ~~~~~~~~~~--g~~l~~~~~g~~~-~~~~~~vl~lhG~~~~~~~~~~~~----------------~-------~l~~~~ 87 (346)
....++.+.+ +..++|+.+.+.. .+..|.|+++.|.++++..+..+. . ...+.
T Consensus 39 ~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~- 117 (437)
T PLN02209 39 LETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT- 117 (437)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-
Confidence 3455666643 5678888766432 235799999999988876542110 0 11222
Q ss_pred CeEEEEECCC-CCCCCCCCC--cc-cHHHHHHHHHHHHHH----cC-C-CCeEEEEEEccChHHHHHhHhhc--------
Q 037354 88 GIYFVLYDRA-GYGESDPNP--RR-TVKSEAFDIVELADQ----LQ-L-GSKFYVIGVSIGSYPTWSCLKYI-------- 149 (346)
Q Consensus 88 g~~vi~~D~~-G~G~S~~~~--~~-~~~~~~~~l~~~l~~----l~-~-~~~~~lvGhS~Gg~~a~~~a~~~-------- 149 (346)
..++.+|.| |.|.|-... .. +-++.++++.+++.. .. . ..++++.|.|+||..+-.+|..-
T Consensus 118 -anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~ 196 (437)
T PLN02209 118 -ANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICC 196 (437)
T ss_pred -CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhccccc
Confidence 459999965 999885322 11 223344565555543 21 1 25899999999999776655421
Q ss_pred --cCceeeeEEecccCC
Q 037354 150 --PHRLAGVALIVPTIN 164 (346)
Q Consensus 150 --p~~v~~lil~~~~~~ 164 (346)
+-.++|+++.++..+
T Consensus 197 ~~~inl~Gi~igng~td 213 (437)
T PLN02209 197 NPPINLQGYVLGNPITH 213 (437)
T ss_pred CCceeeeeEEecCcccC
Confidence 125779999888754
No 166
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.36 E-value=0.00011 Score=63.60 Aligned_cols=130 Identities=18% Similarity=0.160 Sum_probs=83.2
Q ss_pred ccccceeecC--CCceEEEEEcCCCC-CCCCeEEEEEcCCCCCCcccccchHHH-------------------HHhcCeE
Q 037354 33 LVDAARIRLS--DGRYLAYREKGVSK-IESNYRIVLVHGFGSSKEMNFPASQEL-------------------IESLGIY 90 (346)
Q Consensus 33 ~~~~~~~~~~--~g~~l~~~~~g~~~-~~~~~~vl~lhG~~~~~~~~~~~~~~l-------------------~~~~g~~ 90 (346)
.....++.+. .|..|+|+-..+.. .+.+|.||++.|.++++..- -++.++ .+. -.
T Consensus 43 ~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~--aN 119 (454)
T KOG1282|consen 43 KQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKE--AN 119 (454)
T ss_pred ccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCcccccc--cc
Confidence 3456678876 58999999876543 24589999999999887543 111111 111 23
Q ss_pred EEEECCC-CCCCCCCCCc----ccHHHHHHHHHHHH----HHcC--CCCeEEEEEEccChHHHHHhHhh----c-----c
Q 037354 91 FVLYDRA-GYGESDPNPR----RTVKSEAFDIVELA----DQLQ--LGSKFYVIGVSIGSYPTWSCLKY----I-----P 150 (346)
Q Consensus 91 vi~~D~~-G~G~S~~~~~----~~~~~~~~~l~~~l----~~l~--~~~~~~lvGhS~Gg~~a~~~a~~----~-----p 150 (346)
++.+|.| |.|.|-.... .+-+..++|+..++ ++.- ..+++++.|-|++|...-.+|.. . |
T Consensus 120 iLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~ 199 (454)
T KOG1282|consen 120 ILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKP 199 (454)
T ss_pred EEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCC
Confidence 8899988 8887743221 24445555654444 3321 13689999999999877666642 1 1
Q ss_pred -CceeeeEEecccCCC
Q 037354 151 -HRLAGVALIVPTINY 165 (346)
Q Consensus 151 -~~v~~lil~~~~~~~ 165 (346)
-.++|+++-+|..+.
T Consensus 200 ~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 200 NINLKGYAIGNGLTDP 215 (454)
T ss_pred cccceEEEecCcccCc
Confidence 257888888887653
No 167
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.36 E-value=5.5e-05 Score=61.37 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=64.5
Q ss_pred CeEEEEEcCCCCCCcc--cccchHHHHHhcCeEEEEECCCCCCCCCCCCcc--cHHHHHHHHHHHHHHcC-CCCeEEEEE
Q 037354 60 NYRIVLVHGFGSSKEM--NFPASQELIESLGIYFVLYDRAGYGESDPNPRR--TVKSEAFDIVELADQLQ-LGSKFYVIG 134 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~l~~~l~~l~-~~~~~~lvG 134 (346)
..|+|+.||+|.+... ...+.+.+...-|..+.++.. |.+. ...+ .+.+.++.+.+.+.... +.+-++++|
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~-~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIG 100 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV-GDSWLMPLTQQAEIACEKVKQMKELSQGYNIVG 100 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc-cccceeCHHHHHHHHHHHHhhchhhhCcEEEEE
Confidence 4589999999987654 223333332222455555544 3331 1222 55566665555554321 124699999
Q ss_pred EccChHHHHHhHhhccC--ceeeeEEeccc
Q 037354 135 VSIGSYPTWSCLKYIPH--RLAGVALIVPT 162 (346)
Q Consensus 135 hS~Gg~~a~~~a~~~p~--~v~~lil~~~~ 162 (346)
+|.||.++-.++.++|+ .|+.+|.+++.
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 99999999999999987 59999999975
No 168
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.35 E-value=5.5e-05 Score=65.97 Aligned_cols=130 Identities=16% Similarity=0.175 Sum_probs=78.6
Q ss_pred ccccceeecCC--CceEEEEEcCCC-CCCCCeEEEEEcCCCCCCcccc------cch-----------------HHHHHh
Q 037354 33 LVDAARIRLSD--GRYLAYREKGVS-KIESNYRIVLVHGFGSSKEMNF------PAS-----------------QELIES 86 (346)
Q Consensus 33 ~~~~~~~~~~~--g~~l~~~~~g~~-~~~~~~~vl~lhG~~~~~~~~~------~~~-----------------~~l~~~ 86 (346)
.....++++.+ +..++|+.+.+. +.+..|.||++.|.++++..+. ++. ....+.
T Consensus 36 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 115 (433)
T PLN03016 36 ELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM 115 (433)
T ss_pred eEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc
Confidence 34566777753 567888876543 2346799999999988776321 110 011222
Q ss_pred cCeEEEEECCC-CCCCCCCCC--cc-cHHHHHHHHHHHHHH----cC--CCCeEEEEEEccChHHHHHhHhhc-------
Q 037354 87 LGIYFVLYDRA-GYGESDPNP--RR-TVKSEAFDIVELADQ----LQ--LGSKFYVIGVSIGSYPTWSCLKYI------- 149 (346)
Q Consensus 87 ~g~~vi~~D~~-G~G~S~~~~--~~-~~~~~~~~l~~~l~~----l~--~~~~~~lvGhS~Gg~~a~~~a~~~------- 149 (346)
..++.+|.| |.|.|-... .. +-.+.++++.+++.. .. ...++++.|.|+||..+-.+|..-
T Consensus 116 --anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~ 193 (433)
T PLN03016 116 --ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 193 (433)
T ss_pred --CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccc
Confidence 459999955 999985332 11 111223444444433 21 125899999999999776665431
Q ss_pred ---cCceeeeEEecccCC
Q 037354 150 ---PHRLAGVALIVPTIN 164 (346)
Q Consensus 150 ---p~~v~~lil~~~~~~ 164 (346)
+-.++|+++-++...
T Consensus 194 ~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 194 CEPPINLQGYMLGNPVTY 211 (433)
T ss_pred cCCcccceeeEecCCCcC
Confidence 125779998888653
No 169
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.29 E-value=9.5e-06 Score=63.52 Aligned_cols=98 Identities=17% Similarity=0.194 Sum_probs=70.0
Q ss_pred eEEEEEcCCCCCCcc--cccchHHHHHhcCeEEEEECCCCCC--CCCCCCcccHHHHHHHHHHHHHHcC-CCCeEEEEEE
Q 037354 61 YRIVLVHGFGSSKEM--NFPASQELIESLGIYFVLYDRAGYG--ESDPNPRRTVKSEAFDIVELADQLQ-LGSKFYVIGV 135 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~G--~S~~~~~~~~~~~~~~l~~~l~~l~-~~~~~~lvGh 135 (346)
.|+|++||++..+.. +..+.+.+.+.-|..|+++|. |-| .|.- ..+.+.++.+.+.+.... +.+-++++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l---~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSL---MPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhh---ccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 589999999988876 667777777766888999987 555 2211 134455554444443221 2257999999
Q ss_pred ccChHHHHHhHhhccC-ceeeeEEeccc
Q 037354 136 SIGSYPTWSCLKYIPH-RLAGVALIVPT 162 (346)
Q Consensus 136 S~Gg~~a~~~a~~~p~-~v~~lil~~~~ 162 (346)
|.||.++-.++...++ .|+.+|.+++.
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999999988775 68999988865
No 170
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.25 E-value=4.9e-06 Score=68.23 Aligned_cols=104 Identities=19% Similarity=0.306 Sum_probs=63.2
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcC--eEEEEECCCCCCCCCCC------CcccHHHHHHHHHHHHHHcCCCCeE
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLG--IYFVLYDRAGYGESDPN------PRRTVKSEAFDIVELADQLQLGSKF 130 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~S~~~------~~~~~~~~~~~l~~~l~~l~~~~~~ 130 (346)
.+..+||+||+..+-..=-.-..++....| ...+.+-||..|.--.- ..++-..+..-|..+.+.... +++
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~-~~I 193 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV-KRI 193 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC-ceE
Confidence 578999999998764322111122222222 44778888876643110 012333333334444444455 699
Q ss_pred EEEEEccChHHHHHhHhh--------ccCceeeeEEecccC
Q 037354 131 YVIGVSIGSYPTWSCLKY--------IPHRLAGVALIVPTI 163 (346)
Q Consensus 131 ~lvGhS~Gg~~a~~~a~~--------~p~~v~~lil~~~~~ 163 (346)
+|++||||.+++++.... .+.+++.+||.+|-.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 999999999999876642 244688899998864
No 171
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.22 E-value=5.1e-06 Score=74.40 Aligned_cols=104 Identities=11% Similarity=0.100 Sum_probs=62.9
Q ss_pred CCCCeEEEEEcCCCCCCcccccchHHHHH---------------hcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHH
Q 037354 57 IESNYRIVLVHGFGSSKEMNFPASQELIE---------------SLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELA 121 (346)
Q Consensus 57 ~~~~~~vl~lhG~~~~~~~~~~~~~~l~~---------------~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l 121 (346)
+.++-||+|++|..|+..+-+.++..... .+.|+.++.|+-+ +-..-.+.++.+.++-+.+.+
T Consensus 86 elsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE--e~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE--EFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred cCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc--hhhhhccHhHHHHHHHHHHHH
Confidence 34678999999999998777655544331 1135566666531 000111235666666655555
Q ss_pred HHc-----C-------CCCeEEEEEEccChHHHHHhHhh---ccCceeeeEEeccc
Q 037354 122 DQL-----Q-------LGSKFYVIGVSIGSYPTWSCLKY---IPHRLAGVALIVPT 162 (346)
Q Consensus 122 ~~l-----~-------~~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lil~~~~ 162 (346)
+.. + .++.+++|||||||.+|..++.. .++.|+-++..+++
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 432 1 12569999999999999877754 23445555555543
No 172
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.19 E-value=0.0001 Score=59.53 Aligned_cols=56 Identities=7% Similarity=-0.019 Sum_probs=47.4
Q ss_pred CcEEEEecCCCCCCchhHHHHHHHhc----CCceEEEecCCCcceeec--cchhHHHHHHHh
Q 037354 278 SSVHIWQGYEDKVVPFQLQRFISRKL----SWIKYHEVRDGGHLILHY--NGMCDYFLRALL 333 (346)
Q Consensus 278 ~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl 333 (346)
+|-|+++++.|.+++.+..++..+.. -+++...++++.|..++. |++..+.+.+|+
T Consensus 179 ~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 179 CPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 44999999999999998887666554 247888999999999994 999999999885
No 173
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.17 E-value=1.9e-05 Score=71.23 Aligned_cols=107 Identities=11% Similarity=-0.047 Sum_probs=68.5
Q ss_pred CCCeEEEEEcCCCCCCcccc-cchHHHHHhcC-eEEEEECCC----CCCCCCCC---Ccc---cHHHHHHHHHHHHHHcC
Q 037354 58 ESNYRIVLVHGFGSSKEMNF-PASQELIESLG-IYFVLYDRA----GYGESDPN---PRR---TVKSEAFDIVELADQLQ 125 (346)
Q Consensus 58 ~~~~~vl~lhG~~~~~~~~~-~~~~~l~~~~g-~~vi~~D~~----G~G~S~~~---~~~---~~~~~~~~l~~~l~~l~ 125 (346)
+..|+||++||.+.....-. .....+....+ +.|+.+++| |+..+... ... +.....+.+.+-++.++
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 45799999999753321111 13355665544 899999999 33333211 112 34444455556666664
Q ss_pred C-CCeEEEEEEccChHHHHHhHhh--ccCceeeeEEecccCC
Q 037354 126 L-GSKFYVIGVSIGSYPTWSCLKY--IPHRLAGVALIVPTIN 164 (346)
Q Consensus 126 ~-~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lil~~~~~~ 164 (346)
. .++|+++|+|.||..+..++.. .+..++++|++++...
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 3 2689999999999999887765 2446899999887654
No 174
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.16 E-value=5.4e-06 Score=66.50 Aligned_cols=103 Identities=18% Similarity=0.183 Sum_probs=56.0
Q ss_pred CCeEEEEEcCCCCCCc---ccccchHHHHHhc-CeEEEEECCCCCCCCC-CCCc--ccHHHHHHHHHHHHHHcC-CCCeE
Q 037354 59 SNYRIVLVHGFGSSKE---MNFPASQELIESL-GIYFVLYDRAGYGESD-PNPR--RTVKSEAFDIVELADQLQ-LGSKF 130 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~---~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~-~~~~--~~~~~~~~~l~~~l~~l~-~~~~~ 130 (346)
+..|||+.||++.+.. .+..+...+.+.+ |..|.+++. |-+.++ .... .++.+.++.+.+.++... +.+-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 4569999999997642 3444433333332 656777776 333221 1111 145666666666665421 22479
Q ss_pred EEEEEccChHHHHHhHhhccC-ceeeeEEeccc
Q 037354 131 YVIGVSIGSYPTWSCLKYIPH-RLAGVALIVPT 162 (346)
Q Consensus 131 ~lvGhS~Gg~~a~~~a~~~p~-~v~~lil~~~~ 162 (346)
+++|+|.||.++-.++.++|+ .|+.+|.+++.
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 999999999999999999976 69999999975
No 175
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.08 E-value=5.6e-05 Score=65.67 Aligned_cols=118 Identities=17% Similarity=0.153 Sum_probs=68.8
Q ss_pred CceEEEEEcCCCC--CCCCeEEEEEcCCCCCCcc-cccchHHHHHhcC----eEEEEECCCCC-CCCCCCC-cc-cHHHH
Q 037354 44 GRYLAYREKGVSK--IESNYRIVLVHGFGSSKEM-NFPASQELIESLG----IYFVLYDRAGY-GESDPNP-RR-TVKSE 113 (346)
Q Consensus 44 g~~l~~~~~g~~~--~~~~~~vl~lhG~~~~~~~-~~~~~~~l~~~~g----~~vi~~D~~G~-G~S~~~~-~~-~~~~~ 113 (346)
|.+..+..+.++. .+..|+|+++||..-.... ....+..|.++ | ..++.+|..+. .++.... .. -.+.+
T Consensus 191 g~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~-g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l 269 (411)
T PRK10439 191 GNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHR-GQLPPAVYLLIDAIDTTHRSQELPCNADFWLAV 269 (411)
T ss_pred CCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHc-CCCCceEEEEECCCCcccccccCCchHHHHHHH
Confidence 3334444443332 2356899999995422111 11233444444 3 33567775321 1111101 11 23334
Q ss_pred HHHHHHHHHHc-CC---CCeEEEEEEccChHHHHHhHhhccCceeeeEEeccc
Q 037354 114 AFDIVELADQL-QL---GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 114 ~~~l~~~l~~l-~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~ 162 (346)
+++|.-.+++. .. .++.+|+|+||||..|+.++.++|+.+.+++.+++.
T Consensus 270 ~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 270 QQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 45666666543 21 257899999999999999999999999999999986
No 176
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.08 E-value=6.5e-05 Score=65.60 Aligned_cols=41 Identities=15% Similarity=0.177 Sum_probs=36.4
Q ss_pred EEEEecCCCCCCchhHHHHHHHhc-CCceEEEecCCCcceee
Q 037354 280 VHIWQGYEDKVVPFQLQRFISRKL-SWIKYHEVRDGGHLILH 320 (346)
Q Consensus 280 vlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~ 320 (346)
+|++.|.+|..++++..+.+.+.+ ...+++++.+++|.+-.
T Consensus 307 VLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 307 VLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred eEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 999999999999999999988887 45789999999997643
No 177
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.06 E-value=8.9e-05 Score=62.31 Aligned_cols=106 Identities=16% Similarity=0.158 Sum_probs=71.2
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhc----CeEEEEECCCCCCCC--CCCCcccHHHHHHHHHHHHHHcCCCCeEEE
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESL----GIYFVLYDRAGYGES--DPNPRRTVKSEAFDIVELADQLQLGSKFYV 132 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~----g~~vi~~D~~G~G~S--~~~~~~~~~~~~~~l~~~l~~l~~~~~~~l 132 (346)
+.|+||++||.|-.-......+..+..-+ ...++++|+.-...- +..-..-+.+.++-...+++..|. +.++|
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~-~nI~L 199 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGN-KNIIL 199 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCC-CeEEE
Confidence 57999999999876555443333322110 346888888644300 111123566777777788877787 79999
Q ss_pred EEEccChHHHHHhHhhcc--C---ceeeeEEecccCCC
Q 037354 133 IGVSIGSYPTWSCLKYIP--H---RLAGVALIVPTINY 165 (346)
Q Consensus 133 vGhS~Gg~~a~~~a~~~p--~---~v~~lil~~~~~~~ 165 (346)
+|-|.||.+++.+..... . .-+++||++|+...
T Consensus 200 mGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 200 MGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 999999999988765321 1 25799999999764
No 178
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.92 E-value=9.6e-05 Score=63.56 Aligned_cols=118 Identities=14% Similarity=0.057 Sum_probs=74.9
Q ss_pred eEEEEEcCCC-CCCCCeEEEEEcCCC---CCCcccccchHHHHHhcCeEEEEECCC-CC-CC---CCCC--Cc----ccH
Q 037354 46 YLAYREKGVS-KIESNYRIVLVHGFG---SSKEMNFPASQELIESLGIYFVLYDRA-GY-GE---SDPN--PR----RTV 110 (346)
Q Consensus 46 ~l~~~~~g~~-~~~~~~~vl~lhG~~---~~~~~~~~~~~~l~~~~g~~vi~~D~~-G~-G~---S~~~--~~----~~~ 110 (346)
.|+.-.|-+. +.++.|++|+|||.+ ++......--..|+++.++-|+++++| |. |. |.-. .. ..+
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl 158 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGL 158 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccH
Confidence 3455555554 445679999999976 333332222357777744889999988 22 31 1111 11 123
Q ss_pred H---HHHHHHHHHHHHcCC-CCeEEEEEEccChHHHHHhHhhcc---CceeeeEEecccCC
Q 037354 111 K---SEAFDIVELADQLQL-GSKFYVIGVSIGSYPTWSCLKYIP---HRLAGVALIVPTIN 164 (346)
Q Consensus 111 ~---~~~~~l~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lil~~~~~~ 164 (346)
. --.+++.+-|+++|- .+.|.|+|+|.||+.++.+.+. | ..++++|+.++...
T Consensus 159 ~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 159 LDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 3 334556677778763 2689999999999988877765 4 36888888888753
No 179
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.91 E-value=0.00044 Score=60.79 Aligned_cols=127 Identities=19% Similarity=0.142 Sum_probs=84.6
Q ss_pred ccceeecCCCceEEEEEcCCC-CCCCCeEEEEEcCCCCCCc--ccccchHHHHHhcCeEEEEECCCCCCCCCCC------
Q 037354 35 DAARIRLSDGRYLAYREKGVS-KIESNYRIVLVHGFGSSKE--MNFPASQELIESLGIYFVLYDRAGYGESDPN------ 105 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~-~~~~~~~vl~lhG~~~~~~--~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~------ 105 (346)
+....+..||.+|.|...+.. ...+.|++|+--|...-+. .|........++ |...+..+.||=|+=.+.
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLer-Gg~~v~ANIRGGGEfGp~WH~Aa~ 473 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLER-GGVFVLANIRGGGEFGPEWHQAGM 473 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhc-CCeEEEEecccCCccCHHHHHHHh
Confidence 445566679999999988622 1125778777665443332 355555666666 666677899998865431
Q ss_pred ---CcccHHHHHHHHHHHHHHcCC--CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 106 ---PRRTVKSEAFDIVELADQLQL--GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 106 ---~~~~~~~~~~~l~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
....++|++.-.+++++. ++ .+++.+.|-|-||.+.-.+...+|+.+.++|.--|..
T Consensus 474 k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 474 KENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred hhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 112455555555555543 22 2578999999999999888888899999988777754
No 180
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.90 E-value=7e-05 Score=64.81 Aligned_cols=112 Identities=15% Similarity=0.111 Sum_probs=69.0
Q ss_pred eeecCCCceEEEEEcCCCCCCCCeEEEEEc-CCCCCCcccccchHHHHHhcCeE------EEEECCCCCCCCCCCCcccH
Q 037354 38 RIRLSDGRYLAYREKGVSKIESNYRIVLVH-GFGSSKEMNFPASQELIESLGIY------FVLYDRAGYGESDPNPRRTV 110 (346)
Q Consensus 38 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~lh-G~~~~~~~~~~~~~~l~~~~g~~------vi~~D~~G~G~S~~~~~~~~ 110 (346)
.....+|..+..-.+|... .|-.+- ........|..+++.|.+. ||. ..-+|+|---. ..
T Consensus 33 ~~~~~~gv~i~~~~~g~~~-----~i~~ld~~~~~~~~~~~~li~~L~~~-GY~~~~~l~~~pYDWR~~~~-------~~ 99 (389)
T PF02450_consen 33 HYSNDPGVEIRVPGFGGTS-----GIEYLDPSFITGYWYFAKLIENLEKL-GYDRGKDLFAAPYDWRLSPA-------ER 99 (389)
T ss_pred ceecCCCceeecCCCCcee-----eeeecccccccccchHHHHHHHHHhc-CcccCCEEEEEeechhhchh-------hH
Confidence 3444467777766666211 222221 1222222788999998764 664 22267762111 23
Q ss_pred HHHHHHHHHHHHHc---CCCCeEEEEEEccChHHHHHhHhhccC------ceeeeEEecccC
Q 037354 111 KSEAFDIVELADQL---QLGSKFYVIGVSIGSYPTWSCLKYIPH------RLAGVALIVPTI 163 (346)
Q Consensus 111 ~~~~~~l~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~------~v~~lil~~~~~ 163 (346)
+++...+.++++.. . +++++||||||||.++..+....++ .|+++|.++++.
T Consensus 100 ~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 100 DEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 45555555555433 3 4799999999999999998887743 599999999864
No 181
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.86 E-value=0.00047 Score=60.98 Aligned_cols=130 Identities=17% Similarity=0.128 Sum_probs=86.7
Q ss_pred ccccceeecCCCceEEEEEcC---CCCCCCCeEEEEEcCCCCCC--cccccchHHHHHhcCeEEEEECCCCCCCCCCC--
Q 037354 33 LVDAARIRLSDGRYLAYREKG---VSKIESNYRIVLVHGFGSSK--EMNFPASQELIESLGIYFVLYDRAGYGESDPN-- 105 (346)
Q Consensus 33 ~~~~~~~~~~~g~~l~~~~~g---~~~~~~~~~vl~lhG~~~~~--~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-- 105 (346)
..+...+...||..+.-...- .....++|.+|..+|.-+-+ -.|..--..|.+ .|+-....|.||=|.-...
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld-~G~Vla~a~VRGGGe~G~~WH 518 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLD-RGWVLAYANVRGGGEYGEQWH 518 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEe-cceEEEEEeeccCcccccchh
Confidence 445566777789875543322 22223577777777654332 124333234444 4887777899997754321
Q ss_pred -C------cccHHHHHHHHHHHHHHc--CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 106 -P------RRTVKSEAFDIVELADQL--QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 106 -~------~~~~~~~~~~l~~~l~~l--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
. ..+++|+..-.+.+++.- .. ++..+.|.|.||.++..++..+|+.++++|+-.|+.+
T Consensus 519 k~G~lakKqN~f~Dfia~AeyLve~gyt~~-~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 519 KDGRLAKKQNSFDDFIACAEYLVENGYTQP-SKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred hccchhhhcccHHHHHHHHHHHHHcCCCCc-cceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 1 137788877777777542 33 6899999999999999999999999999998887653
No 182
>COG0627 Predicted esterase [General function prediction only]
Probab=97.84 E-value=0.00012 Score=60.69 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=70.5
Q ss_pred CCeEEEEEcCCCCCCcccc--cchHHHHHhcCeEEEEECCC--------------CCCCC---CCCC------cccHHHH
Q 037354 59 SNYRIVLVHGFGSSKEMNF--PASQELIESLGIYFVLYDRA--------------GYGES---DPNP------RRTVKSE 113 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~--~~~~~l~~~~g~~vi~~D~~--------------G~G~S---~~~~------~~~~~~~ 113 (346)
+-|+++++||..++...|. .-++..++..|+.++++|-. |-+.| +... .+.++++
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 4678888999998854443 33566666668888876332 22222 1100 1344443
Q ss_pred H-HHHHHHHH-HcCCCC---eEEEEEEccChHHHHHhHhhccCceeeeEEecccCCC
Q 037354 114 A-FDIVELAD-QLQLGS---KFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINY 165 (346)
Q Consensus 114 ~-~~l~~~l~-~l~~~~---~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 165 (346)
. +++-+.++ +..... +..++||||||.=|+.+|+++|+++..+..+++....
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 3 34553443 443211 6889999999999999999999999999999987653
No 183
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.83 E-value=0.0019 Score=57.60 Aligned_cols=127 Identities=17% Similarity=0.095 Sum_probs=84.5
Q ss_pred ceeecCCCceEEEEEcCC---CCCCCCeEEEEEcCCCCCCc--ccccchHHHHHhcCeEEEEECCCCCCCCCCC------
Q 037354 37 ARIRLSDGRYLAYREKGV---SKIESNYRIVLVHGFGSSKE--MNFPASQELIESLGIYFVLYDRAGYGESDPN------ 105 (346)
Q Consensus 37 ~~~~~~~g~~l~~~~~g~---~~~~~~~~vl~lhG~~~~~~--~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~------ 105 (346)
..++..||.++.+...-. ....+.|.+|..-|.-+.+. .|....-.|.++ |+-....-.||=|.-...
T Consensus 422 iwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~~WYe~GK 500 (682)
T COG1770 422 IWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDR-GFVYAIAHVRGGGELGRAWYEDGK 500 (682)
T ss_pred EEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecC-ceEEEEEEeecccccChHHHHhhh
Confidence 344546888766643321 22335677777766544432 233334456666 874444566776654321
Q ss_pred ---CcccHHHHHHHHHHHHHHc-CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 106 ---PRRTVKSEAFDIVELADQL-QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 106 ---~~~~~~~~~~~l~~~l~~l-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
...++.|+++....+++.- .-.+.++++|-|.||+++...+...|+.++++|+-.|+.+
T Consensus 501 ~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 501 LLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred hhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 1238888888888887653 2225899999999999999999999999999999988764
No 184
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.82 E-value=1.7e-05 Score=66.35 Aligned_cols=59 Identities=24% Similarity=0.155 Sum_probs=48.2
Q ss_pred CcEEEEecCCCCCCchhHHHHHHHhcCC--ceEEEecCCCcceeec-cc---hhHHHHHHHhhcc
Q 037354 278 SSVHIWQGYEDKVVPFQLQRFISRKLSW--IKYHEVRDGGHLILHY-NG---MCDYFLRALLVGE 336 (346)
Q Consensus 278 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e-~~---~~~~~i~~fl~~~ 336 (346)
+|+|+++|.+|..+|......+.+.... .+...+++++|..... .. +..+.+.+|+.+.
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 4599999999999999999888777755 5788889999998874 33 6788888888754
No 185
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.79 E-value=0.0081 Score=53.42 Aligned_cols=115 Identities=18% Similarity=0.199 Sum_probs=71.0
Q ss_pred eEEEEEcCCCCCCCCeEEEEEcCCCCCCcccc-c----chHHHHHhcCeEEEEECCCCCCCCCC--CC--cc--------
Q 037354 46 YLAYREKGVSKIESNYRIVLVHGFGSSKEMNF-P----ASQELIESLGIYFVLYDRAGYGESDP--NP--RR-------- 108 (346)
Q Consensus 46 ~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~-~----~~~~l~~~~g~~vi~~D~~G~G~S~~--~~--~~-------- 108 (346)
.|.+..+-+.. =..-++.+-|.+.....-. . +...+. .||.++.-|- ||..+.. .. ..
T Consensus 16 ~i~fev~LP~~--WNgR~~~~GgGG~~G~i~~~~~~~~~~~~~~--~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~df 90 (474)
T PF07519_consen 16 NIRFEVWLPDN--WNGRFLQVGGGGFAGGINYADGKASMATALA--RGYATASTDS-GHQGSAGSDDASFGNNPEALLDF 90 (474)
T ss_pred eEEEEEECChh--hccCeEEECCCeeeCcccccccccccchhhh--cCeEEEEecC-CCCCCcccccccccCCHHHHHHH
Confidence 66666665541 1224555554443332222 2 223333 3999999887 7765532 11 11
Q ss_pred ---cHHHHHHHHHHHHHHc-C-CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCCC
Q 037354 109 ---TVKSEAFDIVELADQL-Q-LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTINY 165 (346)
Q Consensus 109 ---~~~~~~~~l~~~l~~l-~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 165 (346)
++.+.+.--.++++.+ + ..+.-+..|.|-||.-++..|++||+.++++|.-+|...+
T Consensus 91 a~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 91 AYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 2333333344555443 2 1257899999999999999999999999999999998653
No 186
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.73 E-value=0.00094 Score=53.94 Aligned_cols=118 Identities=16% Similarity=0.088 Sum_probs=66.1
Q ss_pred ceEEEEEcCCCCCCCCeEEEEEcCCC--CCCcccccchHHHHHhc---CeEEEEECCCCCC---CCCCCCcccHHHHHHH
Q 037354 45 RYLAYREKGVSKIESNYRIVLVHGFG--SSKEMNFPASQELIESL---GIYFVLYDRAGYG---ESDPNPRRTVKSEAFD 116 (346)
Q Consensus 45 ~~l~~~~~g~~~~~~~~~vl~lhG~~--~~~~~~~~~~~~l~~~~---g~~vi~~D~~G~G---~S~~~~~~~~~~~~~~ 116 (346)
..+-|...|.....+-|.+++.||-. .+...+ .+++.+..+. .-.+|.+|.--.- +.-.......+.++++
T Consensus 83 ~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~-~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~e 161 (299)
T COG2382 83 RRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIP-RILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQE 161 (299)
T ss_pred eEEEEeCCCCCccccccEEEEeccHHHHhcCChH-HHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHH
Confidence 34445555544444678999999743 222223 2334444431 2234444442100 0000011133334444
Q ss_pred HHHHHHHc----CCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 117 IVELADQL----QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 117 l~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
|.=.++.. ..+..-+|.|.|+||.+++..+..||+++..++..+|..
T Consensus 162 LlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 162 LLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred hhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 44333322 123467899999999999999999999999999998864
No 187
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.72 E-value=9.7e-05 Score=61.68 Aligned_cols=102 Identities=23% Similarity=0.145 Sum_probs=77.3
Q ss_pred eEEEEEcCCCCCCcccc---cchHHHHHhcCeEEEEECCCCCCCCCCCCc----------c-cHHHHHHHHHHHHHHcCC
Q 037354 61 YRIVLVHGFGSSKEMNF---PASQELIESLGIYFVLYDRAGYGESDPNPR----------R-TVKSEAFDIVELADQLQL 126 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~---~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~----------~-~~~~~~~~l~~~l~~l~~ 126 (346)
.||+|.-|.-++-+.|. -++..++.+++--+|..+.|-+|+|.+-.. + +.++-.+|...++.+++-
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 68999999988876664 456677777777799999999999975321 1 556666666666666642
Q ss_pred -----CCeEEEEEEccChHHHHHhHhhccCceeeeEEeccc
Q 037354 127 -----GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 127 -----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~ 162 (346)
..+++.+|-|+||+++.-+=.+||.-|.|.+.-+++
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 258999999999999999999999988876655544
No 188
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.67 E-value=0.00059 Score=62.33 Aligned_cols=122 Identities=13% Similarity=-0.008 Sum_probs=66.1
Q ss_pred CCceEEEEEcCCCCCC-CCeEEEEEcCCCCCCcc---cccchHHHHHhcCeEEEEECCC----CCCCCC---CC-Ccc--
Q 037354 43 DGRYLAYREKGVSKIE-SNYRIVLVHGFGSSKEM---NFPASQELIESLGIYFVLYDRA----GYGESD---PN-PRR-- 108 (346)
Q Consensus 43 ~g~~l~~~~~g~~~~~-~~~~vl~lhG~~~~~~~---~~~~~~~l~~~~g~~vi~~D~~----G~G~S~---~~-~~~-- 108 (346)
|...|.+..-...... ..|++|++||.+..... .......+....+.-||++.+| |+-.+. .+ ..+
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 186 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGL 186 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHH
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhh
Confidence 5555555443222211 45999999997643221 1122234444448999999998 443232 11 223
Q ss_pred -cHHHHHHHHHHHHHHcCC-CCeEEEEEEccChHHHHHhHhh--ccCceeeeEEecccCC
Q 037354 109 -TVKSEAFDIVELADQLQL-GSKFYVIGVSIGSYPTWSCLKY--IPHRLAGVALIVPTIN 164 (346)
Q Consensus 109 -~~~~~~~~l~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lil~~~~~~ 164 (346)
+...-.++|.+-|..+|- .++|.|+|||.||..+..++.. -...++++|+.++...
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 333444556677777763 2689999999999988665554 1357999999998643
No 189
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.66 E-value=0.0017 Score=49.02 Aligned_cols=117 Identities=20% Similarity=0.145 Sum_probs=69.5
Q ss_pred eEEEEEcCCCCCCCCeEEEEEcCCCCCCccccc--------chHHHHH-------hcCeEEEE---ECCCCCCCCCCCCc
Q 037354 46 YLAYREKGVSKIESNYRIVLVHGFGSSKEMNFP--------ASQELIE-------SLGIYFVL---YDRAGYGESDPNPR 107 (346)
Q Consensus 46 ~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~--------~~~~l~~-------~~g~~vi~---~D~~G~G~S~~~~~ 107 (346)
-......|+++. .+.+.++++|.+.+...... +.+.+.. .....||+ +|.|..+..+....
T Consensus 6 graava~GD~d~-A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~ 84 (177)
T PF06259_consen 6 GRAAVAVGDPDT-ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASP 84 (177)
T ss_pred EEEEEEECCcCC-cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCc
Confidence 345566777653 45688999999877654321 1111111 11223333 34441111111112
Q ss_pred ccHHHHHHHHHHHHHHcC----CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 108 RTVKSEAFDIVELADQLQ----LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 108 ~~~~~~~~~l~~~l~~l~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
.--++-+.+|..+++.|. .+..+.++|||+|+.++-..+...+..+..+|+++++.
T Consensus 85 ~~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 85 GYARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred hHHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 234555666666666553 22479999999999999888877677899999998753
No 190
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.65 E-value=0.0007 Score=57.26 Aligned_cols=58 Identities=19% Similarity=0.083 Sum_probs=47.7
Q ss_pred CCcEEEEecCCCCCCchhHHHHHHHhcCC-ceEEEecCCCcceeeccchhHHHHHHHhhcc
Q 037354 277 ESSVHIWQGYEDKVVPFQLQRFISRKLSW-IKYHEVRDGGHLILHYNGMCDYFLRALLVGE 336 (346)
Q Consensus 277 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~~~~~~~i~~fl~~~ 336 (346)
+.|.++|.|..|....+.....+...+|+ ..+..+|+++|.... ..+.+.|..|+...
T Consensus 262 ~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 262 TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFYNRI 320 (367)
T ss_pred CccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHHHHH
Confidence 44499999999999999999999999985 568999999998877 55666677777653
No 191
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.64 E-value=0.00058 Score=57.76 Aligned_cols=120 Identities=17% Similarity=0.172 Sum_probs=80.6
Q ss_pred CceEEEEEcCCCCCCCCeEEEEEcCCCCCCcc--cccchHHHHHhcCeEEEEECCCCCCCCCCCCc--------------
Q 037354 44 GRYLAYREKGVSKIESNYRIVLVHGFGSSKEM--NFPASQELIESLGIYFVLYDRAGYGESDPNPR-------------- 107 (346)
Q Consensus 44 g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-------------- 107 (346)
..+|.|+..-++..+.+..|+++.|+|++... ++...+.++++++..|+.+++-|.|..+....
T Consensus 19 ~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~ 98 (403)
T PF11144_consen 19 ESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKK 98 (403)
T ss_pred cceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHHH
Confidence 45788887655544567789999999998764 45777889998888888888888774422100
Q ss_pred ------c------c---HH-----------------------------------------------HHHHHHHHHHHHcC
Q 037354 108 ------R------T---VK-----------------------------------------------SEAFDIVELADQLQ 125 (346)
Q Consensus 108 ------~------~---~~-----------------------------------------------~~~~~l~~~l~~l~ 125 (346)
. + .. |....+..+.+.+.
T Consensus 99 ~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~ 178 (403)
T PF11144_consen 99 SLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFP 178 (403)
T ss_pred HHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 0 0 00 01111111112221
Q ss_pred -CC--CeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 126 -LG--SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 126 -~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
.+ -+++++|+|.||.+|...|.-.|..+++++=-++.+
T Consensus 179 ~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 179 KNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred cccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 11 389999999999999999999999999988776654
No 192
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.61 E-value=0.0012 Score=50.11 Aligned_cols=103 Identities=18% Similarity=0.256 Sum_probs=64.9
Q ss_pred CCeEEEEEcCCCCC-Ccccc---------------cchHHHHHhcCeEEEEECCCC---CCCCCCCC-cc--cHHHHHHH
Q 037354 59 SNYRIVLVHGFGSS-KEMNF---------------PASQELIESLGIYFVLYDRAG---YGESDPNP-RR--TVKSEAFD 116 (346)
Q Consensus 59 ~~~~vl~lhG~~~~-~~~~~---------------~~~~~l~~~~g~~vi~~D~~G---~G~S~~~~-~~--~~~~~~~~ 116 (346)
+...+|++||.|-- +..|. +.+++-.+. ||.|++.+.-- +-.+...+ .+ +..+.+.-
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~-Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAE-GYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHc-CCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 45689999998843 23342 222333333 88899887531 22222111 11 33344443
Q ss_pred H-HHHHHHcCCCCeEEEEEEccChHHHHHhHhhccC--ceeeeEEecccC
Q 037354 117 I-VELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPH--RLAGVALIVPTI 163 (346)
Q Consensus 117 l-~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lil~~~~~ 163 (346)
+ ..++.-... +.+.++.||.||...+.+..++|+ +|-++.|.++..
T Consensus 179 vw~~~v~pa~~-~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 179 VWKNIVLPAKA-ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHhcccCc-ceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 2 344444555 799999999999999999999885 788888888763
No 193
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.55 E-value=0.0007 Score=58.25 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=83.7
Q ss_pred CCeEEEEEcCCCCCCcccc----cchHHHHHhcCeEEEEECCCCCCCCCCCCc--------ccHHHHHHHHHHHHHHcCC
Q 037354 59 SNYRIVLVHGFGSSKEMNF----PASQELIESLGIYFVLYDRAGYGESDPNPR--------RTVKSEAFDIVELADQLQL 126 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~----~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--------~~~~~~~~~l~~~l~~l~~ 126 (346)
.+|..|+|-|=+.....|- .....+++++|-.|+.++.|-+|.|.+..+ .+.+....|+.++|++++.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 5788888888776665663 244677888898999999999999865432 2778888899999888742
Q ss_pred ----C--CeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 127 ----G--SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 127 ----~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
. .+++.+|-|+-|.++.-+=..||+.+.+.|.-+++.
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 1 389999999999999999999999999888776654
No 194
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.50 E-value=0.00024 Score=43.32 Aligned_cols=48 Identities=17% Similarity=0.145 Sum_probs=29.1
Q ss_pred CCCccccceeecCCCceEEEEEcCCCC-----CCCCeEEEEEcCCCCCCcccc
Q 037354 30 GDGLVDAARIRLSDGRYLAYREKGVSK-----IESNYRIVLVHGFGSSKEMNF 77 (346)
Q Consensus 30 ~~~~~~~~~~~~~~g~~l~~~~~g~~~-----~~~~~~vl~lhG~~~~~~~~~ 77 (346)
..++.++..+++.||.-|...+...+. ...+|+|++.||+.+++..|-
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 345778999999999988887664332 346899999999999999884
No 195
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.44 E-value=0.01 Score=50.15 Aligned_cols=59 Identities=20% Similarity=0.314 Sum_probs=46.5
Q ss_pred CcEEEEecCCCCCCchhHHHHHHHhcC------------------------C-ceEEEecCCCcceeeccchhHHHHHHH
Q 037354 278 SSVHIWQGYEDKVVPFQLQRFISRKLS------------------------W-IKYHEVRDGGHLILHYNGMCDYFLRAL 332 (346)
Q Consensus 278 ~Pvlii~G~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~i~~~gH~~~~e~~~~~~~i~~f 332 (346)
.+||+..|+.|.+|+.-..+.+.+.+. + .+++.+.+|||+....|+...+.+..|
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~f 313 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQRW 313 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHHH
Confidence 569999999999998766666555441 2 566777899999963499999999999
Q ss_pred hhcc
Q 037354 333 LVGE 336 (346)
Q Consensus 333 l~~~ 336 (346)
+...
T Consensus 314 i~~~ 317 (319)
T PLN02213 314 ISGQ 317 (319)
T ss_pred HcCC
Confidence 9763
No 196
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.38 E-value=0.0018 Score=51.76 Aligned_cols=111 Identities=10% Similarity=0.031 Sum_probs=75.2
Q ss_pred EEcCCCCCCCCeEEEEEcCCCCCCcc-cccchHHHHHhcCeEEEEECCCCCCCCCCCC-cccHHHHHHHHHHHHHHcCCC
Q 037354 50 REKGVSKIESNYRIVLVHGFGSSKEM-NFPASQELIESLGIYFVLYDRAGYGESDPNP-RRTVKSEAFDIVELADQLQLG 127 (346)
Q Consensus 50 ~~~g~~~~~~~~~vl~lhG~~~~~~~-~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~l~~~ 127 (346)
...+.......|.||++-.+.++... .+...+.|....+ |+.-||-.--.-+-.. .++++|+++-+.++++.+|.
T Consensus 93 ~r~~~~~r~pdPkvLivapmsGH~aTLLR~TV~alLp~~~--vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp- 169 (415)
T COG4553 93 ERDMPDARKPDPKVLIVAPMSGHYATLLRGTVEALLPYHD--VYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGP- 169 (415)
T ss_pred hhccccccCCCCeEEEEecccccHHHHHHHHHHHhccccc--eeEeeccccceeecccCCccHHHHHHHHHHHHHHhCC-
Confidence 33344444456788888888777544 3355666766545 8888885433222222 45999999999999999996
Q ss_pred CeEEEEEEccChHHHH-----HhHhhccCceeeeEEecccCC
Q 037354 128 SKFYVIGVSIGSYPTW-----SCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 128 ~~~~lvGhS~Gg~~a~-----~~a~~~p~~v~~lil~~~~~~ 164 (346)
.+++++.+.=+.-.+ ..+...|..-.+++++++..+
T Consensus 170 -~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 170 -DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred -CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 488888888765433 333445667788999998754
No 197
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.30 E-value=0.00068 Score=50.54 Aligned_cols=52 Identities=23% Similarity=0.078 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHc----CCCCeEEEEEEccChHHHHHhHhhccC----ceeeeEEecccC
Q 037354 111 KSEAFDIVELADQL----QLGSKFYVIGVSIGSYPTWSCLKYIPH----RLAGVALIVPTI 163 (346)
Q Consensus 111 ~~~~~~l~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lil~~~~~ 163 (346)
..+.+.+...++.. .. .+++++|||+||.+|..++..... ++..++.++++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~-~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPD-YKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCC-CeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34445555555443 44 699999999999999998887654 566777777753
No 198
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.29 E-value=0.00079 Score=58.24 Aligned_cols=115 Identities=14% Similarity=0.126 Sum_probs=71.9
Q ss_pred EEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchH-------------------HHHHhcCeEEEEECCC-CCCCCCCCC
Q 037354 47 LAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQ-------------------ELIESLGIYFVLYDRA-GYGESDPNP 106 (346)
Q Consensus 47 l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~-------------------~l~~~~g~~vi~~D~~-G~G~S~~~~ 106 (346)
+.|...++....++|.++++.|.++++..|-.+.+ .+... =.++.+|+| |.|.|....
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~--adLvFiDqPvGTGfS~a~~ 165 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF--ADLVFIDQPVGTGFSRALG 165 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC--CceEEEecCcccCcccccc
Confidence 33444444444568999999999999887643311 11111 238999955 999887421
Q ss_pred ---cccHHHHHHHHHHHHHHc--------CCCCeEEEEEEccChHHHHHhHhhccC---ceeeeEEecccC
Q 037354 107 ---RRTVKSEAFDIVELADQL--------QLGSKFYVIGVSIGSYPTWSCLKYIPH---RLAGVALIVPTI 163 (346)
Q Consensus 107 ---~~~~~~~~~~l~~~l~~l--------~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lil~~~~~ 163 (346)
..+.....+|+..+.+.+ .+..+.+|+|-|+||.-+..+|..--+ ..++++++.+..
T Consensus 166 ~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 166 DEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred cccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 125555555655554432 222589999999999998887764333 356666665554
No 199
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.27 E-value=0.0048 Score=49.21 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=33.6
Q ss_pred CeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 128 SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 128 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
++-.++|||+||.+++.....+|+.+...++++|+.
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 468999999999999999999999999999999974
No 200
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.26 E-value=0.0014 Score=51.59 Aligned_cols=101 Identities=15% Similarity=0.005 Sum_probs=60.4
Q ss_pred CCeEEEEEcCCCCC---CcccccchHHHHHhcCeEEEEECCCCCCCCCCC-CcccHHHHHHHHHHHHHHcCCC---CeEE
Q 037354 59 SNYRIVLVHGFGSS---KEMNFPASQELIESLGIYFVLYDRAGYGESDPN-PRRTVKSEAFDIVELADQLQLG---SKFY 131 (346)
Q Consensus 59 ~~~~vl~lhG~~~~---~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~~l~~~l~~l~~~---~~~~ 131 (346)
+...|-|+-|..-. .-.|+.+.+.|+++ ||.|++.-+.- |..... ...-++.+-.-+..+.+..+.. -+++
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~-Gy~ViAtPy~~-tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~ 93 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADR-GYAVIATPYVV-TFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVY 93 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhC-CcEEEEEecCC-CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCee
Confidence 45677788775433 23577889999987 99999987631 110000 0001112222222222222221 2688
Q ss_pred EEEEccChHHHHHhHhhccCceeeeEEecc
Q 037354 132 VIGVSIGSYPTWSCLKYIPHRLAGVALIVP 161 (346)
Q Consensus 132 lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 161 (346)
-+|||+|+-+-+.+...++..-++.|+++-
T Consensus 94 ~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 94 GVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred eeecccchHHHHHHhhhccCcccceEEEec
Confidence 999999999999888877665577777763
No 201
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.07 E-value=0.0014 Score=47.30 Aligned_cols=79 Identities=22% Similarity=0.207 Sum_probs=51.3
Q ss_pred eEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChH
Q 037354 61 YRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSY 140 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ 140 (346)
-.||+.-|++..++....++ +.+.+. -++++|+......- |+. .. +.+.+|++|||-+
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN~d-l~lcYDY~dl~ldf------------Dfs------Ay-~hirlvAwSMGVw 69 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPENHD-LLLCYDYQDLNLDF------------DFS------AY-RHIRLVAWSMGVW 69 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCCCc-EEEEeehhhcCccc------------chh------hh-hhhhhhhhhHHHH
Confidence 48999999999887766442 122212 26788886432110 111 12 4678999999999
Q ss_pred HHHHhHhhccCceeeeEEecccC
Q 037354 141 PTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 141 ~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
+|-++.... ++++.+.+++..
T Consensus 70 vAeR~lqg~--~lksatAiNGTg 90 (214)
T COG2830 70 VAERVLQGI--RLKSATAINGTG 90 (214)
T ss_pred HHHHHHhhc--cccceeeecCCC
Confidence 999888764 477777777653
No 202
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.04 E-value=0.0013 Score=48.21 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhc
Q 037354 111 KSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 111 ~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
++..+.+.++++.... .++++.|||+||.+|..++...
T Consensus 48 ~~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYPD-YSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHhh
Confidence 3555666676666665 6999999999999998877653
No 203
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.91 E-value=0.0053 Score=51.61 Aligned_cols=87 Identities=22% Similarity=0.218 Sum_probs=61.5
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHc----CCCCeEEEEE
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQL----QLGSKFYVIG 134 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l----~~~~~~~lvG 134 (346)
+...-||+.|=|+-...=..+.++|.++ |+.|+.+|-.-+=.|.+ +.++.++|+..++++. +. +++.|+|
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~~-gvpVvGvdsLRYfW~~r----tPe~~a~Dl~r~i~~y~~~w~~-~~~~liG 332 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQKQ-GVPVVGVDSLRYFWSER----TPEQIAADLSRLIRFYARRWGA-KRVLLIG 332 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHHC-CCceeeeehhhhhhccC----CHHHHHHHHHHHHHHHHHhhCc-ceEEEEe
Confidence 3445666666555444444666777766 99999999654444444 7888899998888776 34 6899999
Q ss_pred EccChHHHHHhHhhccC
Q 037354 135 VSIGSYPTWSCLKYIPH 151 (346)
Q Consensus 135 hS~Gg~~a~~~a~~~p~ 151 (346)
+|+|+-+.-..-.+.|.
T Consensus 333 ySfGADvlP~~~n~L~~ 349 (456)
T COG3946 333 YSFGADVLPFAYNRLPP 349 (456)
T ss_pred ecccchhhHHHHHhCCH
Confidence 99999987655555453
No 204
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.90 E-value=0.0013 Score=58.29 Aligned_cols=84 Identities=14% Similarity=0.080 Sum_probs=52.1
Q ss_pred ccccchHHHHHhcCeE-----EEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHc---CCCCeEEEEEEccChHHHHHhH
Q 037354 75 MNFPASQELIESLGIY-----FVLYDRAGYGESDPNPRRTVKSEAFDIVELADQL---QLGSKFYVIGVSIGSYPTWSCL 146 (346)
Q Consensus 75 ~~~~~~~~l~~~~g~~-----vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a 146 (346)
.|..+++.|.+. ||. ...+|+|=-. . ....-+++-..+..+++.. .-+++++|+||||||.+++.+.
T Consensus 157 vw~kLIe~L~~i-GY~~~nL~gAPYDWRls~---~-~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 157 VWAVLIANLARI-GYEEKNMYMAAYDWRLSF---Q-NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eHHHHHHHHHHc-CCCCCceeecccccccCc---c-chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 457888888865 764 3345665211 0 0112244444455554432 3237999999999999999876
Q ss_pred hhc---------------cCceeeeEEecccC
Q 037354 147 KYI---------------PHRLAGVALIVPTI 163 (346)
Q Consensus 147 ~~~---------------p~~v~~lil~~~~~ 163 (346)
... .+.|++.|.++++.
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheeccccc
Confidence 532 13588999999864
No 205
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.83 E-value=0.0034 Score=49.70 Aligned_cols=47 Identities=19% Similarity=0.154 Sum_probs=35.6
Q ss_pred HHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhcc----CceeeeEEeccc
Q 037354 114 AFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIP----HRLAGVALIVPT 162 (346)
Q Consensus 114 ~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lil~~~~ 162 (346)
++-+..+++..+ .++++.|||.||.+|..++...+ ++|.+++..+++
T Consensus 72 ~~yl~~~~~~~~--~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 72 LAYLKKIAKKYP--GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHhCC--CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 334455555554 46999999999999999888743 578999988875
No 206
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.82 E-value=0.0058 Score=51.71 Aligned_cols=111 Identities=16% Similarity=0.231 Sum_probs=83.2
Q ss_pred eEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCc----ccHHHHHHHHHHHH
Q 037354 46 YLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPR----RTVKSEAFDIVELA 121 (346)
Q Consensus 46 ~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~~l~~~l 121 (346)
++.....+. ++|+|+..-|.+.+......-...|.+ -+-+.+++|-+|.|.+.+. .++++-++|...++
T Consensus 53 RvtLlHk~~----drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~ 125 (448)
T PF05576_consen 53 RVTLLHKDF----DRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIV 125 (448)
T ss_pred EEEEEEcCC----CCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHH
Confidence 444444443 679999999998865544332334443 3488999999999987552 38999999998888
Q ss_pred HHcCC--CCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 122 DQLQL--GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 122 ~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
+.++. +.+.+--|-|-||+.++.+=.-||+.|.+.|.-....
T Consensus 126 ~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 126 QAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred HHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 77752 3589999999999999999888999999988755543
No 207
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.76 E-value=0.017 Score=55.39 Aligned_cols=95 Identities=16% Similarity=0.194 Sum_probs=68.5
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCC--CCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEc
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGE--SDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVS 136 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~--S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS 136 (346)
..|+++|+|..-+....+.. |+.+. ..|.+|. +...+..++++.++-...-+++++...+..++|+|
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~----la~rl-------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALES----LASRL-------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred cCCceEEEeccccchHHHHH----HHhhc-------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 57899999998777665544 44431 2233442 23334558999999888888888875699999999
Q ss_pred cChHHHHHhHhhc--cCceeeeEEecccCC
Q 037354 137 IGSYPTWSCLKYI--PHRLAGVALIVPTIN 164 (346)
Q Consensus 137 ~Gg~~a~~~a~~~--p~~v~~lil~~~~~~ 164 (346)
+|+.++..+|... .+....+|++++.+.
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 9999999988643 334566999998753
No 208
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.60 E-value=0.0044 Score=47.82 Aligned_cols=41 Identities=20% Similarity=0.091 Sum_probs=36.0
Q ss_pred cHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhc
Q 037354 109 TVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 109 ~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
-..|..+....+|++.+-+++++|+|||.|+.+..++...+
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 57788888889999988778999999999999999998765
No 209
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.58 E-value=0.0036 Score=53.75 Aligned_cols=87 Identities=14% Similarity=0.031 Sum_probs=54.8
Q ss_pred ccccchHHHHHhcCeE------EEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhh
Q 037354 75 MNFPASQELIESLGIY------FVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 75 ~~~~~~~~l~~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
.|..+++.+..- ||. -..+|+|=.-......+..+..+..-|+...+.-|- ++++||+||||+.+.+.+...
T Consensus 125 ~w~~~i~~lv~~-GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~-kkVvlisHSMG~l~~lyFl~w 202 (473)
T KOG2369|consen 125 YWHELIENLVGI-GYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGG-KKVVLISHSMGGLYVLYFLKW 202 (473)
T ss_pred HHHHHHHHHHhh-CcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCC-CceEEEecCCccHHHHHHHhc
Confidence 566666776654 665 345777621111111123444555555555455554 799999999999999999988
Q ss_pred ccC--------ceeeeEEecccC
Q 037354 149 IPH--------RLAGVALIVPTI 163 (346)
Q Consensus 149 ~p~--------~v~~lil~~~~~ 163 (346)
+++ .|++.+-+++..
T Consensus 203 ~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 203 VEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred ccccchhHHHHHHHHHHccCchh
Confidence 876 467777766543
No 210
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.39 E-value=0.0059 Score=48.97 Aligned_cols=34 Identities=18% Similarity=0.078 Sum_probs=24.6
Q ss_pred CeEEEEEEccChHHHHHhHhhcc-----CceeeeEEecc
Q 037354 128 SKFYVIGVSIGSYPTWSCLKYIP-----HRLAGVALIVP 161 (346)
Q Consensus 128 ~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lil~~~ 161 (346)
.++++.|||+||.+|..++.... ..+..+.+-+|
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P 166 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQP 166 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCC
Confidence 68999999999999988776533 33554444444
No 211
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.32 E-value=0.022 Score=43.48 Aligned_cols=100 Identities=17% Similarity=0.223 Sum_probs=54.1
Q ss_pred eEEEEEcCCCCCCcccc---cchHHHHHhcC---eEEEEECCCCCCCCCCCCcccHHHHHHHHHHHH----HHcCCCCeE
Q 037354 61 YRIVLVHGFGSSKEMNF---PASQELIESLG---IYFVLYDRAGYGESDPNPRRTVKSEAFDIVELA----DQLQLGSKF 130 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~---~~~~~l~~~~g---~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l----~~l~~~~~~ 130 (346)
-.||+..|.+....... .+...+....| ..+..+++|-..... .-..+..+=++++...+ ..-. +.++
T Consensus 6 v~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~-~y~~S~~~G~~~~~~~i~~~~~~CP-~~ki 83 (179)
T PF01083_consen 6 VHVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN-SYGDSVAAGVANLVRLIEEYAARCP-NTKI 83 (179)
T ss_dssp EEEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG-SCHHHHHHHHHHHHHHHHHHHHHST-TSEE
T ss_pred EEEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc-cccccHHHHHHHHHHHHHHHHHhCC-CCCE
Confidence 45677777776543311 23344444433 445556676432221 01124444444444444 3433 3699
Q ss_pred EEEEEccChHHHHHhHhh------ccCceeeeEEeccc
Q 037354 131 YVIGVSIGSYPTWSCLKY------IPHRLAGVALIVPT 162 (346)
Q Consensus 131 ~lvGhS~Gg~~a~~~a~~------~p~~v~~lil~~~~ 162 (346)
+|+|+|.|+.++..++.. ..++|.++++++-+
T Consensus 84 vl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 84 VLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp EEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred EEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 999999999999888766 34689999999865
No 212
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.16 E-value=0.0075 Score=41.73 Aligned_cols=40 Identities=15% Similarity=0.141 Sum_probs=24.0
Q ss_pred eeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCccccc
Q 037354 38 RIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFP 78 (346)
Q Consensus 38 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~ 78 (346)
+.+..+|..||+....+.. .+..||||+||++++-..|..
T Consensus 71 f~t~I~g~~iHFih~rs~~-~~aiPLll~HGWPgSf~Ef~~ 110 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSKR-PNAIPLLLLHGWPGSFLEFLK 110 (112)
T ss_dssp EEEEETTEEEEEEEE--S--TT-EEEEEE--SS--GGGGHH
T ss_pred eeEEEeeEEEEEEEeeCCC-CCCeEEEEECCCCccHHhHHh
Confidence 3444489999998876532 467899999999999766654
No 213
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.11 E-value=0.5 Score=39.98 Aligned_cols=59 Identities=14% Similarity=-0.040 Sum_probs=49.0
Q ss_pred EEEEecCCCCCCchhHHHHHHHhc----CCceEEEecCCCcceeec--cchhHHHHHHHhhcccc
Q 037354 280 VHIWQGYEDKVVPFQLQRFISRKL----SWIKYHEVRDGGHLILHY--NGMCDYFLRALLVGEES 338 (346)
Q Consensus 280 vlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e--~~~~~~~i~~fl~~~~~ 338 (346)
.+.+.+..|.++|....+++.+.. -+++.+-+.++-|..+.. |..+.+...+|+++..+
T Consensus 228 ~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 228 QLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred ceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 888889999999998887764433 356777788899999985 99999999999998764
No 214
>PLN02162 triacylglycerol lipase
Probab=96.10 E-value=0.015 Score=50.34 Aligned_cols=37 Identities=11% Similarity=-0.029 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHh
Q 037354 110 VKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLK 147 (346)
Q Consensus 110 ~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 147 (346)
+.++.+.+.+++..... .++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~-~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKN-LKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCC-ceEEEEecChHHHHHHHHHH
Confidence 34455566666666554 68999999999999988764
No 215
>PLN00413 triacylglycerol lipase
Probab=96.03 E-value=0.018 Score=50.08 Aligned_cols=36 Identities=25% Similarity=0.176 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHh
Q 037354 111 KSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLK 147 (346)
Q Consensus 111 ~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 147 (346)
.++.+.+.++++.... .++++.|||+||.+|..+|.
T Consensus 268 y~i~~~Lk~ll~~~p~-~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 268 YTILRHLKEIFDQNPT-SKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHCCC-CeEEEEecCHHHHHHHHHHH
Confidence 3566677777777655 68999999999999988774
No 216
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=95.70 E-value=0.053 Score=48.02 Aligned_cols=116 Identities=19% Similarity=0.144 Sum_probs=67.5
Q ss_pred eEEEEEcCCCCCCCCeEEEEEcCCCCC---CcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHH---HHH
Q 037354 46 YLAYREKGVSKIESNYRIVLVHGFGSS---KEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFD---IVE 119 (346)
Q Consensus 46 ~l~~~~~g~~~~~~~~~vl~lhG~~~~---~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~---l~~ 119 (346)
+-.|+.|-++-..++-.|+-+||.|.- +..-+...+.++...|.-|+.+|+-=--+..-+ .-+++.--. +..
T Consensus 382 ~~~~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFP--RaleEv~fAYcW~in 459 (880)
T KOG4388|consen 382 QRSLELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFP--RALEEVFFAYCWAIN 459 (880)
T ss_pred ccccccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCC--cHHHHHHHHHHHHhc
Confidence 345666655543456678889998843 444456667778888899999998433333221 123322221 222
Q ss_pred HHHHcCC-CCeEEEEEEccChHHHHHhHhhc---cCc-eeeeEEecccC
Q 037354 120 LADQLQL-GSKFYVIGVSIGSYPTWSCLKYI---PHR-LAGVALIVPTI 163 (346)
Q Consensus 120 ~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~---p~~-v~~lil~~~~~ 163 (346)
-...+|. +++|+++|-|.||.+.+..+.+. .-| -+|+++.-+..
T Consensus 460 n~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 460 NCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred CHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 2233443 47999999999999765544332 112 34666655543
No 217
>PLN02571 triacylglycerol lipase
Probab=95.69 E-value=0.015 Score=49.94 Aligned_cols=38 Identities=11% Similarity=0.021 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHcCC-CCeEEEEEEccChHHHHHhHhh
Q 037354 111 KSEAFDIVELADQLQL-GSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 111 ~~~~~~l~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
+++.++|..+++.... ..++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4566677777776543 1268999999999999888764
No 218
>PLN02454 triacylglycerol lipase
Probab=95.54 E-value=0.019 Score=49.34 Aligned_cols=34 Identities=18% Similarity=0.083 Sum_probs=23.2
Q ss_pred HHHHHHHHHcCCC-CeEEEEEEccChHHHHHhHhh
Q 037354 115 FDIVELADQLQLG-SKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 115 ~~l~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
..|..+++...-. .++++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444455444321 149999999999999988854
No 219
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.33 E-value=0.022 Score=48.18 Aligned_cols=85 Identities=14% Similarity=0.152 Sum_probs=49.5
Q ss_pred CCeEEEEEcCCCC-CCcccccchHHHHHhc-CeEEEEECCCCCCCCCCCC---cccHHHHHHHHHHHHHHcCCCCeEEEE
Q 037354 59 SNYRIVLVHGFGS-SKEMNFPASQELIESL-GIYFVLYDRAGYGESDPNP---RRTVKSEAFDIVELADQLQLGSKFYVI 133 (346)
Q Consensus 59 ~~~~vl~lhG~~~-~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~lv 133 (346)
++-.||+.||+-+ +...|...+....... ++.++..+.. +...... ..--+..++++.+.+....+ +++..+
T Consensus 79 ~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~--~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si-~kISfv 155 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKM--NNMCQTFDGVDVLGERLAEEVKETLYDYSI-EKISFV 155 (405)
T ss_pred CceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccc--cchhhccccceeeecccHHHHhhhhhcccc-ceeeee
Confidence 4568999999988 4555655555555432 2223333333 2221111 11223445556665555667 699999
Q ss_pred EEccChHHHHHhH
Q 037354 134 GVSIGSYPTWSCL 146 (346)
Q Consensus 134 GhS~Gg~~a~~~a 146 (346)
|||+||.++-.+.
T Consensus 156 ghSLGGLvar~AI 168 (405)
T KOG4372|consen 156 GHSLGGLVARYAI 168 (405)
T ss_pred eeecCCeeeeEEE
Confidence 9999999875544
No 220
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.24 E-value=0.1 Score=47.94 Aligned_cols=105 Identities=10% Similarity=-0.029 Sum_probs=62.4
Q ss_pred CeEEEEEcCCCCCCcc---cc-cchHHHHHhcCeEEEEECCC----CC---CCCCCCCcccHHHHH---HHHHHHHHHcC
Q 037354 60 NYRIVLVHGFGSSKEM---NF-PASQELIESLGIYFVLYDRA----GY---GESDPNPRRTVKSEA---FDIVELADQLQ 125 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~---~~-~~~~~l~~~~g~~vi~~D~~----G~---G~S~~~~~~~~~~~~---~~l~~~l~~l~ 125 (346)
.|++|++||.+..... +. .....+....+.-|+.+.+| |+ |.+..+....+.|+. +.+.+-|...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 6999999998743222 21 12223333335667777777 32 322232233444443 34555566665
Q ss_pred -CCCeEEEEEEccChHHHHHhHhh--ccCceeeeEEecccCC
Q 037354 126 -LGSKFYVIGVSIGSYPTWSCLKY--IPHRLAGVALIVPTIN 164 (346)
Q Consensus 126 -~~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lil~~~~~~ 164 (346)
-.++|.++|||.||..+..+... ....++++|.+++...
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 23789999999999998766653 1246777777777653
No 221
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.16 E-value=0.027 Score=41.45 Aligned_cols=113 Identities=14% Similarity=0.102 Sum_probs=66.1
Q ss_pred CceEEEEEcCCCCCCCCeEEEEEcCCCCCCccccc--chHHHH---HhcCeEEEEECCCCCCCCCC-----CCcccHHHH
Q 037354 44 GRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFP--ASQELI---ESLGIYFVLYDRAGYGESDP-----NPRRTVKSE 113 (346)
Q Consensus 44 g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~--~~~~l~---~~~g~~vi~~D~~G~G~S~~-----~~~~~~~~~ 113 (346)
++.+.+..+|.. +.+||+++-.++.-..|+. .+..|+ +.-....++++ |-..-+- .+....+..
T Consensus 14 ~RdMel~ryGHa----G~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a~h~~~adr~~rH 87 (227)
T COG4947 14 NRDMELNRYGHA----GIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLATHKNAADRAERH 87 (227)
T ss_pred cchhhhhhccCC----CCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhhhcCCHHHHHHHH
Confidence 567788888874 4566666665555555542 233333 33123344443 3221111 001122222
Q ss_pred HHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 114 AFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 114 ~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
..--.-++++.=+ ....+-|.||||..|..+..++|+.+.++|.+++..
T Consensus 88 ~AyerYv~eEalp-gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 88 RAYERYVIEEALP-GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred HHHHHHHHHhhcC-CCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 2223334444434 367788999999999999999999999999999864
No 222
>PLN02310 triacylglycerol lipase
Probab=95.15 E-value=0.052 Score=46.59 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHcC---CCCeEEEEEEccChHHHHHhHhh
Q 037354 111 KSEAFDIVELADQLQ---LGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 111 ~~~~~~l~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
+++.+.|..+++... ...++++.|||+||.+|...|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344556666766552 22479999999999999887753
No 223
>PLN02408 phospholipase A1
Probab=95.13 E-value=0.031 Score=47.29 Aligned_cols=37 Identities=16% Similarity=0.038 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHcCC-CCeEEEEEEccChHHHHHhHhhc
Q 037354 113 EAFDIVELADQLQL-GSKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 113 ~~~~l~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
..+.|..+++...- ..++++.|||+||.+|..+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 34556666665542 13699999999999998877653
No 224
>PLN02934 triacylglycerol lipase
Probab=95.05 E-value=0.038 Score=48.54 Aligned_cols=37 Identities=19% Similarity=0.135 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHh
Q 037354 110 VKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLK 147 (346)
Q Consensus 110 ~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 147 (346)
.+...+.+.++++.... .++++.|||+||.+|..++.
T Consensus 304 y~~v~~~lk~ll~~~p~-~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKN-AKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCC-CeEEEeccccHHHHHHHHHH
Confidence 34566667777777654 69999999999999988874
No 225
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.83 E-value=0.057 Score=40.96 Aligned_cols=58 Identities=12% Similarity=-0.009 Sum_probs=45.2
Q ss_pred CcEEEEecCCCCCCchhHHHHHHHhc---CC--ceEEEecCCCcceeec----cchhHHHHHHHhhc
Q 037354 278 SSVHIWQGYEDKVVPFQLQRFISRKL---SW--IKYHEVRDGGHLILHY----NGMCDYFLRALLVG 335 (346)
Q Consensus 278 ~Pvlii~G~~D~~~~~~~~~~~~~~~---~~--~~~~~i~~~gH~~~~e----~~~~~~~i~~fl~~ 335 (346)
+++|-|-|+.|.++.+.........+ |. ...++.+|+||+.... .+++...|.+|+.+
T Consensus 135 taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 135 TALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred ceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 34788999999999887766555554 42 3578889999998873 77889999999864
No 226
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.56 E-value=0.48 Score=39.02 Aligned_cols=124 Identities=16% Similarity=0.115 Sum_probs=79.1
Q ss_pred eeecCCCceEEEEEcCCC--CCCCCeEEEEEcCCCCCCcc-c---ccch----------HHHHHhcCeEEEEECCC-CCC
Q 037354 38 RIRLSDGRYLAYREKGVS--KIESNYRIVLVHGFGSSKEM-N---FPAS----------QELIESLGIYFVLYDRA-GYG 100 (346)
Q Consensus 38 ~~~~~~g~~l~~~~~g~~--~~~~~~~vl~lhG~~~~~~~-~---~~~~----------~~l~~~~g~~vi~~D~~-G~G 100 (346)
++...++..+.+..+-.. .....|..+.+.|.++.+.. | +.+- ....+. -.++.+|-| |.|
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaG 84 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAG 84 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCc
Confidence 445556666666554321 11246788889888766543 2 2111 011222 337888887 888
Q ss_pred CCCCC--Ccc--cHHHHHHHHHHHHHHc-------CCCCeEEEEEEccChHHHHHhHhhccC---------ceeeeEEec
Q 037354 101 ESDPN--PRR--TVKSEAFDIVELADQL-------QLGSKFYVIGVSIGSYPTWSCLKYIPH---------RLAGVALIV 160 (346)
Q Consensus 101 ~S~~~--~~~--~~~~~~~~l~~~l~~l-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~---------~v~~lil~~ 160 (346)
.|-.. ..| +..+.+.|+.++++.+ +. .+++++.-|+||-+|..++...-+ .+.+++|=+
T Consensus 85 fSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t-~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGD 163 (414)
T KOG1283|consen 85 FSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKT-VPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGD 163 (414)
T ss_pred eeeecCcccccccHHHHHHHHHHHHHHHHhcCccccc-cceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccC
Confidence 88432 223 7889999999999865 23 589999999999999888764322 356777777
Q ss_pred ccCC
Q 037354 161 PTIN 164 (346)
Q Consensus 161 ~~~~ 164 (346)
+..+
T Consensus 164 SWIS 167 (414)
T KOG1283|consen 164 SWIS 167 (414)
T ss_pred cccC
Confidence 7653
No 227
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.53 E-value=0.12 Score=43.70 Aligned_cols=36 Identities=19% Similarity=0.390 Sum_probs=28.8
Q ss_pred CeEEEEEEccChHHHHHhHhhccC-----ceeeeEEecccC
Q 037354 128 SKFYVIGVSIGSYPTWSCLKYIPH-----RLAGVALIVPTI 163 (346)
Q Consensus 128 ~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lil~~~~~ 163 (346)
+++.|||||+|+.+.........+ .|+.++|++.+.
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 589999999999998776654433 389999998764
No 228
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.49 E-value=0.053 Score=47.80 Aligned_cols=37 Identities=11% Similarity=0.053 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHcC---CCCeEEEEEEccChHHHHHhHhh
Q 037354 112 SEAFDIVELADQLQ---LGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 112 ~~~~~l~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
+..++|..+++... ...++++.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44566777776553 22479999999999999887753
No 229
>PLN02324 triacylglycerol lipase
Probab=94.39 E-value=0.055 Score=46.50 Aligned_cols=36 Identities=11% Similarity=0.018 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHcCC-CCeEEEEEEccChHHHHHhHhh
Q 037354 113 EAFDIVELADQLQL-GSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 113 ~~~~l~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
+.+.|..+++...- ..++++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 44456667765542 1369999999999999888754
No 230
>PLN02753 triacylglycerol lipase
Probab=94.26 E-value=0.066 Score=47.31 Aligned_cols=37 Identities=14% Similarity=0.029 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcCC----CCeEEEEEEccChHHHHHhHhh
Q 037354 112 SEAFDIVELADQLQL----GSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 112 ~~~~~l~~~l~~l~~----~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
++.+.|..+++.... +.++++.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 444556666665531 2489999999999999888753
No 231
>PLN02802 triacylglycerol lipase
Probab=94.16 E-value=0.073 Score=46.83 Aligned_cols=37 Identities=16% Similarity=0.095 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHcCC-CCeEEEEEEccChHHHHHhHhh
Q 037354 112 SEAFDIVELADQLQL-GSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 112 ~~~~~l~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
++.+.|..+++...- ..++++.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344456666665432 1378999999999999887764
No 232
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=93.96 E-value=0.11 Score=43.34 Aligned_cols=59 Identities=12% Similarity=-0.021 Sum_probs=43.8
Q ss_pred CCCcEEEEecCCCCCCchhHHHHHHHhcCCc-eEEEecCCCcceeeccchhHHHHHHHhhcc
Q 037354 276 NESSVHIWQGYEDKVVPFQLQRFISRKLSWI-KYHEVRDGGHLILHYNGMCDYFLRALLVGE 336 (346)
Q Consensus 276 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~~~~~~~i~~fl~~~ 336 (346)
+..|-.++.|..|...++..+......+|+. .+..+|+..|..... .+.+.+..|++..
T Consensus 328 LalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~--~i~esl~~flnrf 387 (507)
T COG4287 328 LALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ--FIKESLEPFLNRF 387 (507)
T ss_pred ccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH--HHHHHHHHHHHHH
Confidence 4444899999999999999998888999875 488999999977654 2344445555443
No 233
>PLN02761 lipase class 3 family protein
Probab=93.89 E-value=0.086 Score=46.58 Aligned_cols=36 Identities=14% Similarity=0.092 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHcC-----CCCeEEEEEEccChHHHHHhHh
Q 037354 112 SEAFDIVELADQLQ-----LGSKFYVIGVSIGSYPTWSCLK 147 (346)
Q Consensus 112 ~~~~~l~~~l~~l~-----~~~~~~lvGhS~Gg~~a~~~a~ 147 (346)
++.+.|..+++... ...++++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 44555666666552 2237999999999999988774
No 234
>PLN02719 triacylglycerol lipase
Probab=93.61 E-value=0.099 Score=46.10 Aligned_cols=37 Identities=14% Similarity=0.047 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHcC----CCCeEEEEEEccChHHHHHhHhh
Q 037354 112 SEAFDIVELADQLQ----LGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 112 ~~~~~l~~~l~~l~----~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
++.+.|..+++... ...++++.|||+||.+|..+|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34445566665543 11379999999999999887753
No 235
>PLN02847 triacylglycerol lipase
Probab=92.39 E-value=0.23 Score=44.74 Aligned_cols=21 Identities=19% Similarity=0.121 Sum_probs=18.1
Q ss_pred CeEEEEEEccChHHHHHhHhh
Q 037354 128 SKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 128 ~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999877654
No 236
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.27 E-value=0.2 Score=42.66 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhh
Q 037354 111 KSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 111 ~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
..+.+++..+++...- -++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~-~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN-YSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCC-cEEEEecCChHHHHHHHHHHH
Confidence 5677778888888774 699999999999999887753
No 237
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.19 E-value=0.67 Score=36.87 Aligned_cols=61 Identities=20% Similarity=0.240 Sum_probs=39.7
Q ss_pred CeEEEEECCCCC-----CCCCCCCcccHHHHHHHHHHHHHH-cCCCCeEEEEEEccChHHHHHhHhh
Q 037354 88 GIYFVLYDRAGY-----GESDPNPRRTVKSEAFDIVELADQ-LQLGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 88 g~~vi~~D~~G~-----G~S~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
|+.+..+++|.. |.....-+.|..+=++.+.+.++. ...+++++++|+|.|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 455666777651 211122234777777777777765 2234689999999999999776654
No 238
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.89 E-value=0.46 Score=42.56 Aligned_cols=54 Identities=15% Similarity=0.221 Sum_probs=31.9
Q ss_pred cHHHHHHHHHHHHHHcCC--CCeEEEEEEccChHHHHHhHhh-----ccC------ceeeeEEeccc
Q 037354 109 TVKSEAFDIVELADQLQL--GSKFYVIGVSIGSYPTWSCLKY-----IPH------RLAGVALIVPT 162 (346)
Q Consensus 109 ~~~~~~~~l~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a~~-----~p~------~v~~lil~~~~ 162 (346)
++..-...+.+.+...++ +.+++.+||||||.++=.+... .|+ ..+|+|+++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 333333444444444444 3689999999999988554432 232 35667776653
No 239
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=86.06 E-value=2 Score=34.86 Aligned_cols=24 Identities=13% Similarity=0.097 Sum_probs=20.9
Q ss_pred CCeEEEEEEccChHHHHHhHhhcc
Q 037354 127 GSKFYVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 127 ~~~~~lvGhS~Gg~~a~~~a~~~p 150 (346)
+.++.+-|||+||.+|..+..++.
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CceEEEeccccchHHHHHhccccC
Confidence 368999999999999998888764
No 240
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=86.06 E-value=2 Score=34.86 Aligned_cols=24 Identities=13% Similarity=0.097 Sum_probs=20.9
Q ss_pred CCeEEEEEEccChHHHHHhHhhcc
Q 037354 127 GSKFYVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 127 ~~~~~lvGhS~Gg~~a~~~a~~~p 150 (346)
+.++.+-|||+||.+|..+..++.
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CceEEEeccccchHHHHHhccccC
Confidence 368999999999999998888764
No 241
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=85.45 E-value=27 Score=31.26 Aligned_cols=115 Identities=15% Similarity=0.052 Sum_probs=67.4
Q ss_pred eecCCCceEEEEEc-CCCCCCCCeEEEEEcCCCCCCccccc--chHHHHHhcCeEEEEECCCCCCCCCCCCccc-HHHHH
Q 037354 39 IRLSDGRYLAYREK-GVSKIESNYRIVLVHGFGSSKEMNFP--ASQELIESLGIYFVLYDRAGYGESDPNPRRT-VKSEA 114 (346)
Q Consensus 39 ~~~~~g~~l~~~~~-g~~~~~~~~~vl~lhG~~~~~~~~~~--~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~-~~~~~ 114 (346)
+....+..+.|.-. |+- ..|..|+..|+-. .+-|+. .+..|..- | .+.-|.|=-|.+=-..... -..+.
T Consensus 270 ~~D~~reEi~yYFnPGD~---KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~P--f-LL~~DpRleGGaFYlGs~eyE~~I~ 342 (511)
T TIGR03712 270 LVDSKRQEFIYYFNPGDF---KPPLNVYFSGYRP-AEGFEGYFMMKRLGAP--F-LLIGDPRLEGGAFYLGSDEYEQGII 342 (511)
T ss_pred EecCCCCeeEEecCCcCC---CCCeEEeeccCcc-cCcchhHHHHHhcCCC--e-EEeeccccccceeeeCcHHHHHHHH
Confidence 33334555555443 332 3567788888766 455552 23333321 2 5566877666552111112 23445
Q ss_pred HHHHHHHHHcCCC-CeEEEEEEccChHHHHHhHhhccCceeeeEEeccc
Q 037354 115 FDIVELADQLQLG-SKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 115 ~~l~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~ 162 (346)
+-|.+-++.|+.. +..+|-|-|||..-|+.+++... -.++|+--|.
T Consensus 343 ~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL 389 (511)
T TIGR03712 343 NVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPL 389 (511)
T ss_pred HHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcc
Confidence 5667778888863 47999999999999999998743 2455544443
No 242
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=82.10 E-value=16 Score=30.23 Aligned_cols=40 Identities=20% Similarity=0.390 Sum_probs=28.0
Q ss_pred cHHHHHHH-HHHHHHHcCCCCeEEEEEEccChHHHHHhHhh
Q 037354 109 TVKSEAFD-IVELADQLQLGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 109 ~~~~~~~~-l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
.+++-+.+ ...+++....+.++.++|.|-|+..|-.++..
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 34444443 33444666666789999999999999888865
No 243
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.07 E-value=4.5 Score=35.97 Aligned_cols=39 Identities=18% Similarity=0.315 Sum_probs=29.9
Q ss_pred cCCCCeEEEEEEccChHHHHHhHhhcc-----CceeeeEEecccC
Q 037354 124 LQLGSKFYVIGVSIGSYPTWSCLKYIP-----HRLAGVALIVPTI 163 (346)
Q Consensus 124 l~~~~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lil~~~~~ 163 (346)
+|. +|+.|||+|+|+.+.+..+.... .-|..++|++.+.
T Consensus 444 qG~-RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 444 QGN-RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred cCC-CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 455 79999999999999876554322 3588899999764
No 244
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=80.82 E-value=10 Score=25.75 Aligned_cols=80 Identities=16% Similarity=0.132 Sum_probs=50.8
Q ss_pred cchHHHHHhcCeEEEEECCCCCCCCCCCC--cccHHHHHHHHHHHHHHcCCCCeEEEEEEccChH--HHHHhHhhccCce
Q 037354 78 PASQELIESLGIYFVLYDRAGYGESDPNP--RRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSY--PTWSCLKYIPHRL 153 (346)
Q Consensus 78 ~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~--~a~~~a~~~p~~v 153 (346)
+.+..+.+..||-.=.+.++..|.+-... ....+.=...|..+++.+.. .++++||-|--.= +-..+|.++|++|
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~-~kfiLIGDsgq~DpeiY~~ia~~~P~~i 92 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPE-RKFILIGDSGQHDPEIYAEIARRFPGRI 92 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCC-CcEEEEeeCCCcCHHHHHHHHHHCCCCE
Confidence 44555555556655566666665442211 11112345567788888876 7999999997544 3355788999999
Q ss_pred eeeEE
Q 037354 154 AGVAL 158 (346)
Q Consensus 154 ~~lil 158 (346)
.++.+
T Consensus 93 ~ai~I 97 (100)
T PF09949_consen 93 LAIYI 97 (100)
T ss_pred EEEEE
Confidence 98864
No 245
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=77.83 E-value=21 Score=31.14 Aligned_cols=95 Identities=16% Similarity=0.229 Sum_probs=57.9
Q ss_pred EEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcc------------------------cHHHHHHHH
Q 037354 62 RIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRR------------------------TVKSEAFDI 117 (346)
Q Consensus 62 ~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~------------------------~~~~~~~~l 117 (346)
+|+++--+-.-...+..+...+.+ .|..|+.+|.-=.|.+....+. .++.+++-+
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~-~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEA-QGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHH-CCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 455554333334445455555554 5999999998544444322111 233444444
Q ss_pred HHHHHHc----CCCCeEEEEEEccChHHHHHhHhhccCceeeeEE
Q 037354 118 VELADQL----QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVAL 158 (346)
Q Consensus 118 ~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil 158 (346)
..++..+ .+ .-++-+|-|.|..++.......|=-+-+++.
T Consensus 82 ~~~v~~l~~~g~i-~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 82 ARFVSDLYDEGKI-DGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHhcCCc-cEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 4555444 35 5788999999999999988888866666654
No 246
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=76.27 E-value=13 Score=31.89 Aligned_cols=88 Identities=17% Similarity=0.239 Sum_probs=61.8
Q ss_pred CCeEEEEEcCCCCC-------CcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEE
Q 037354 59 SNYRIVLVHGFGSS-------KEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFY 131 (346)
Q Consensus 59 ~~~~vl~lhG~~~~-------~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 131 (346)
+...||++||=..+ .+.|..++.-+.++ ++ +-.+|....|.-+. +++-+..+..+++.. +-.
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-~l-ip~~D~AYQGF~~G-----leeDa~~lR~~a~~~----~~~ 238 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-GL-IPFFDIAYQGFADG-----LEEDAYALRLFAEVG----PEL 238 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-CC-eeeeehhhhhhccc-----hHHHHHHHHHHHHhC----CcE
Confidence 44579999986544 45677777777765 54 77889887775543 566666666666553 228
Q ss_pred EEEEccChHHHHHhHhhccCceeeeEEeccc
Q 037354 132 VIGVSIGSYPTWSCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 132 lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~ 162 (346)
+|..|+.=..++ |.+||.++.+++..
T Consensus 239 lva~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 239 LVASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred EEEehhhhhhhh-----hhhccceeEEEeCC
Confidence 888898777665 78999999999763
No 247
>PRK02399 hypothetical protein; Provisional
Probab=75.17 E-value=36 Score=29.79 Aligned_cols=95 Identities=19% Similarity=0.220 Sum_probs=55.9
Q ss_pred eEEEEEcCCCCCC-cccccchHHHHHhcCeEEEEECCCCCCCCCCCCc------------------------ccHHHHHH
Q 037354 61 YRIVLVHGFGSSK-EMNFPASQELIESLGIYFVLYDRAGYGESDPNPR------------------------RTVKSEAF 115 (346)
Q Consensus 61 ~~vl~lhG~~~~~-~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~------------------------~~~~~~~~ 115 (346)
+.|+++ |...+. ..+..+...+. +.|..|+.+|.-..|......+ .-++.+++
T Consensus 4 ~~I~ii-gT~DTK~~E~~yl~~~i~-~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ 81 (406)
T PRK02399 4 KRIYIA-GTLDTKGEELAYVKDLIE-AAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAE 81 (406)
T ss_pred CEEEEE-eccCCcHHHHHHHHHHHH-HCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHH
Confidence 344444 444443 34444444444 4488999999844442211111 12334444
Q ss_pred HHHHHHHHc----CCCCeEEEEEEccChHHHHHhHhhccCceeeeEE
Q 037354 116 DIVELADQL----QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVAL 158 (346)
Q Consensus 116 ~l~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil 158 (346)
-...+++.| ++ .-++-+|-|.|..++.......|=-+-+++.
T Consensus 82 ga~~~v~~L~~~g~i-~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 82 GAAAFVRELYERGDV-AGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHHHHhcCCc-cEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 455555432 35 5789999999999999988888876666554
No 248
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=75.02 E-value=15 Score=28.71 Aligned_cols=64 Identities=11% Similarity=0.252 Sum_probs=40.8
Q ss_pred CCCeEEEEEcCCCCCCcccccchHHHHHhcCe-EEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEE
Q 037354 58 ESNYRIVLVHGFGSSKEMNFPASQELIESLGI-YFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIG 134 (346)
Q Consensus 58 ~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvG 134 (346)
++..+|++.||....+......+.+....+|| .|+..-.-|+. ..+++.+.++..++ +.++|+-
T Consensus 136 k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP------------~~d~vi~~l~~~~~-~~v~L~P 200 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP------------LVDTVIEYLRKNGI-KEVHLIP 200 (265)
T ss_pred cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC------------cHHHHHHHHHHcCC-ceEEEee
Confidence 45668888999888877666667777777777 45544443332 14455666666677 5666543
No 249
>PRK12467 peptide synthase; Provisional
Probab=73.24 E-value=10 Score=44.12 Aligned_cols=99 Identities=10% Similarity=-0.090 Sum_probs=67.5
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccCh
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGS 139 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg 139 (346)
.+.|++.|...++...+..+...+... ..++.+..++.-... ....++++++....+.+.......+..+.|+|+||
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~~--~~~~~l~~~~~~~d~-~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEGD--RHVLGLTCRHLLDDG-WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCCC--CcEEEEecccccccc-CCccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 356999999888887776666666543 457777765542222 12336777777777777666543589999999999
Q ss_pred HHHHHhHhh---ccCceeeeEEecc
Q 037354 140 YPTWSCLKY---IPHRLAGVALIVP 161 (346)
Q Consensus 140 ~~a~~~a~~---~p~~v~~lil~~~ 161 (346)
.++..++.. ..+.+.-+.+++.
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEec
Confidence 999887753 3456666666654
No 250
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=71.87 E-value=47 Score=29.87 Aligned_cols=124 Identities=14% Similarity=0.047 Sum_probs=66.2
Q ss_pred EEEEEcCC-CCCCCCeEEEEEcCCCCCCc-----ccccchHHHHHhcCeEEEEECCC----C---C-CCCCCCCcc---c
Q 037354 47 LAYREKGV-SKIESNYRIVLVHGFGSSKE-----MNFPASQELIESLGIYFVLYDRA----G---Y-GESDPNPRR---T 109 (346)
Q Consensus 47 l~~~~~g~-~~~~~~~~vl~lhG~~~~~~-----~~~~~~~~l~~~~g~~vi~~D~~----G---~-G~S~~~~~~---~ 109 (346)
|+.-.|-+ .+..+..++|.+-|.|.-+. .|+ ...|+..-+.-|+.+++| | . |.++.+..- +
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~D 198 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLD 198 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHH
Confidence 44445544 23334557788887663322 233 233444334455566665 2 2 233332222 2
Q ss_pred HHHHHHHHHHHHHHcCC-CCeEEEEEEccChHHH-HHhHhh-ccCceeeeEEecccCCCCCCCCCc
Q 037354 110 VKSEAFDIVELADQLQL-GSKFYVIGVSIGSYPT-WSCLKY-IPHRLAGVALIVPTINYEWPSLPQ 172 (346)
Q Consensus 110 ~~~~~~~l~~~l~~l~~-~~~~~lvGhS~Gg~~a-~~~a~~-~p~~v~~lil~~~~~~~~~~~~~~ 172 (346)
-.--.+++.+=+..+|- .+++.|+|.|.|+.-. +++.+- -...++..|+-+++...+|.-.+.
T Consensus 199 QqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~pWA~~s~ 264 (601)
T KOG4389|consen 199 QQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNNPWAIVSP 264 (601)
T ss_pred HHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCCCccccCh
Confidence 22333456666666653 2689999999998754 333321 123678888888877665544333
No 251
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=68.22 E-value=19 Score=28.22 Aligned_cols=65 Identities=9% Similarity=0.098 Sum_probs=46.7
Q ss_pred cCe-EEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEcc----ChHHHHHhHhhcc-CceeeeEEe
Q 037354 87 LGI-YFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSI----GSYPTWSCLKYIP-HRLAGVALI 159 (346)
Q Consensus 87 ~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~----Gg~~a~~~a~~~p-~~v~~lil~ 159 (346)
+|. +|+..|.+... .++.+.+++.+.++++..+. .++++|+|. |..++-++|++.. ..+..++-+
T Consensus 75 ~G~d~V~~~~~~~~~------~~~~e~~a~al~~~i~~~~p--~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 75 MGADRAILVSDRAFA------GADTLATAKALAAAIKKIGV--DLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred cCCCEEEEEeccccc------CCChHHHHHHHHHHHHHhCC--CEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 454 57777665332 45788999999999988874 799999999 8889988888743 234444444
No 252
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=67.93 E-value=12 Score=28.36 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=26.4
Q ss_pred CCeEEEEEcCCCCCCcccc--cchHHHHHhcCeEEEEEC
Q 037354 59 SNYRIVLVHGFGSSKEMNF--PASQELIESLGIYFVLYD 95 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~--~~~~~l~~~~g~~vi~~D 95 (346)
.++.+|++-|+++++..-- .+.+.|.+. |++++.+|
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~-G~~~y~LD 58 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAK-GYHVYLLD 58 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHc-CCeEEEec
Confidence 4578999999998876532 334455544 99999998
No 253
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=67.37 E-value=5.8 Score=33.17 Aligned_cols=31 Identities=16% Similarity=0.114 Sum_probs=24.3
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhh
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
+.++++.+|+ ++-.++|||+|-..|+.++..
T Consensus 72 ~~~~l~~~Gi-~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGV-RPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCC-cccEEEecCHHHHHHHHHhCC
Confidence 3455677888 688999999999988776643
No 254
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=66.82 E-value=3.7 Score=34.80 Aligned_cols=31 Identities=23% Similarity=0.289 Sum_probs=24.5
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhh
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
+.++++..|+ ++-.++|||+|=+.|+.++..
T Consensus 74 l~~~l~~~Gi-~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGI-KPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTH-CESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhccccc-ccceeeccchhhHHHHHHCCc
Confidence 4566678888 799999999998888766643
No 255
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=64.78 E-value=58 Score=27.52 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=58.2
Q ss_pred CCeEEEEEcCCCCC--Ccccc---cchHHHHHhcCeEEEEECCCCCCCCCCCC-----------------cccHHHHHH-
Q 037354 59 SNYRIVLVHGFGSS--KEMNF---PASQELIESLGIYFVLYDRAGYGESDPNP-----------------RRTVKSEAF- 115 (346)
Q Consensus 59 ~~~~vl~lhG~~~~--~~~~~---~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-----------------~~~~~~~~~- 115 (346)
.+..|+|+-|.... ...+. .+...|...-+-+++++=.+|.|--.-.. ..++...+.
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 45677777775433 22222 33445554346777777777887442110 012222222
Q ss_pred HHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecc
Q 037354 116 DIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVP 161 (346)
Q Consensus 116 ~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 161 (346)
.-.-++++...+++|+++|+|-|+.+|--+|.. |+.+-|++.
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm----ir~vGlls~ 151 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM----IRHVGLLSR 151 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH----HHHhhhhcc
Confidence 233445667777899999999999999887765 455555554
No 256
>PF03283 PAE: Pectinacetylesterase
Probab=61.83 E-value=55 Score=28.44 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=30.5
Q ss_pred HHHHHHH-cCCCCeEEEEEEccChHHHHHhH----hhccCceeeeEEecccCC
Q 037354 117 IVELADQ-LQLGSKFYVIGVSIGSYPTWSCL----KYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 117 l~~~l~~-l~~~~~~~lvGhS~Gg~~a~~~a----~~~p~~v~~lil~~~~~~ 164 (346)
|..++.. ++-.++++|-|.|.||.-++..+ ...|..++-..+.++...
T Consensus 144 l~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f 196 (361)
T PF03283_consen 144 LDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFF 196 (361)
T ss_pred HHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccc
Confidence 3344444 43337899999999999887654 345655555555565543
No 257
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=61.79 E-value=9.2 Score=33.24 Aligned_cols=53 Identities=11% Similarity=-0.130 Sum_probs=36.4
Q ss_pred EEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec------cchhHHHHHHHhh
Q 037354 280 VHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY------NGMCDYFLRALLV 334 (346)
Q Consensus 280 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e------~~~~~~~i~~fl~ 334 (346)
+|+|+|++|++.-. . -.+.+.-.++.+.+.||++|...+. .++....|.+|-.
T Consensus 354 mlFVYG~nDPW~A~-~-f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 354 MLFVYGENDPWSAE-P-FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred EEEEeCCCCCcccC-c-cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 99999999998732 1 1222223477889999999987763 3446666777764
No 258
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=61.76 E-value=8 Score=32.33 Aligned_cols=31 Identities=19% Similarity=0.063 Sum_probs=24.1
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhh
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
+.++++..++ ++..++|||+|=..|+.++..
T Consensus 66 l~~~l~~~g~-~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLP-RPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCC-CCcEEeecCHHHHHHHHHhCC
Confidence 4455677788 799999999999888876643
No 259
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=61.27 E-value=11 Score=31.87 Aligned_cols=32 Identities=16% Similarity=0.143 Sum_probs=25.5
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhhc
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
+.+.+++.++ ..-.++|-|+|+.++..+|..+
T Consensus 33 vL~aLee~gi-~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGI-PVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCC
Confidence 4556666687 5678899999999999999864
No 260
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=58.94 E-value=12 Score=28.31 Aligned_cols=32 Identities=9% Similarity=-0.102 Sum_probs=24.4
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhhc
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
+.+.+++.++ ..-.+.|-|.|+.++..++...
T Consensus 16 vl~aL~e~gi-~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 16 VAKALRERGP-LIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCC
Confidence 3444555577 5778999999999999998864
No 261
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=58.85 E-value=51 Score=27.03 Aligned_cols=88 Identities=27% Similarity=0.300 Sum_probs=51.3
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCC----------CCCC-ccc--------HHHHHHHHHH
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGES----------DPNP-RRT--------VKSEAFDIVE 119 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S----------~~~~-~~~--------~~~~~~~l~~ 119 (346)
.-|.+++.||++.....-......+... ++.++..+...+|.+ .... ... ..-...+...
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEK-GYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRL 126 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhc-eeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHH
Confidence 5678999999999988766555566655 677777765222222 2110 000 0111111111
Q ss_pred HHHHcCCCCeEEEEEEccChHHHHHhHhhcc
Q 037354 120 LADQLQLGSKFYVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 120 ~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 150 (346)
.... . .+....|+++|+..+..++...+
T Consensus 127 ~~~~--~-~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 127 LGAS--L-GPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred Hhhh--c-CcceEEEEEeeccchHHHhhcch
Confidence 1111 1 47888899999998888887766
No 262
>PRK10279 hypothetical protein; Provisional
Probab=58.10 E-value=12 Score=31.47 Aligned_cols=34 Identities=18% Similarity=0.098 Sum_probs=26.5
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccC
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPH 151 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 151 (346)
+.+.+++.++ ..-.+.|-|+|+.++..||....+
T Consensus 23 VL~aL~E~gi-~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 23 VINALKKVGI-EIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHHcCC-CcCEEEEEcHHHHHHHHHHcCChH
Confidence 4455666788 577899999999999999976543
No 263
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=57.72 E-value=6.7 Score=29.22 Aligned_cols=47 Identities=17% Similarity=0.299 Sum_probs=28.0
Q ss_pred ECCCCCCCCCCC----CcccHHHHHHHH----HHHHHHcCC---CCeEEEEEEccChH
Q 037354 94 YDRAGYGESDPN----PRRTVKSEAFDI----VELADQLQL---GSKFYVIGVSIGSY 140 (346)
Q Consensus 94 ~D~~G~G~S~~~----~~~~~~~~~~~l----~~~l~~l~~---~~~~~lvGhS~Gg~ 140 (346)
|-+-|||..... ..++.++++.-| ..+.+..+. .+++.|+|+|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 334499977221 245888888888 455544432 26899999999877
No 264
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=56.36 E-value=11 Score=31.38 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=22.8
Q ss_pred HHHHHHcC-CCCeEEEEEEccChHHHHHhHhh
Q 037354 118 VELADQLQ-LGSKFYVIGVSIGSYPTWSCLKY 148 (346)
Q Consensus 118 ~~~l~~l~-~~~~~~lvGhS~Gg~~a~~~a~~ 148 (346)
..++...+ + .+..++|||+|=..|+.++..
T Consensus 73 ~~~l~~~g~i-~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 73 YLKLKEQGGL-KPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHHcCCC-CCCEEeecCHHHHHHHHHhCC
Confidence 34455666 8 688999999999888777654
No 265
>PLN02748 tRNA dimethylallyltransferase
Probab=55.98 E-value=58 Score=29.39 Aligned_cols=77 Identities=17% Similarity=0.192 Sum_probs=49.4
Q ss_pred CCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECC----CCC--CCC------------------CCCCcccHHHH
Q 037354 58 ESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDR----AGY--GES------------------DPNPRRTVKSE 113 (346)
Q Consensus 58 ~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~----~G~--G~S------------------~~~~~~~~~~~ 113 (346)
..++.||++-|-.+++.. .++..|+..++..+|..|- +|. |-. ++...++..++
T Consensus 19 ~~~~~~i~i~GptgsGKs--~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGKS--KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCCEEEEECCCCCCHH--HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 345668888888777765 4566788887888888883 332 111 11124688889
Q ss_pred HHHHHHHHHHcC-CCCeEEEEEEc
Q 037354 114 AFDIVELADQLQ-LGSKFYVIGVS 136 (346)
Q Consensus 114 ~~~l~~~l~~l~-~~~~~~lvGhS 136 (346)
.++....|+.+. -++..+|||-|
T Consensus 97 ~~~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 97 RDHAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHhcCCCeEEEcCh
Confidence 888888887652 22456777743
No 266
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=55.36 E-value=15 Score=28.36 Aligned_cols=31 Identities=16% Similarity=0.053 Sum_probs=23.3
Q ss_pred HHHHHHcCCCCeEEEEEEccChHHHHHhHhhc
Q 037354 118 VELADQLQLGSKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 118 ~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
.+.+++.++ ..-.++|-|.||.++..++..+
T Consensus 18 l~~L~e~~~-~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGI-LKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCC-CcceEEEECHHHHHHHHHHcCC
Confidence 334445566 4678999999999999988753
No 267
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=54.69 E-value=16 Score=30.05 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=25.2
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhhc
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
+.+.+++.++ ..-.+.|-|+|+.++..+|...
T Consensus 28 VL~aLeE~gi-~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGI-PIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCC-CccEEEEECHHHHHHHHHHcCC
Confidence 4455566787 4668899999999999999763
No 268
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=54.11 E-value=18 Score=28.82 Aligned_cols=30 Identities=17% Similarity=0.022 Sum_probs=22.8
Q ss_pred HHHHHcCCCCeEEEEEEccChHHHHHhHhhc
Q 037354 119 ELADQLQLGSKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 119 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
+.+++.++ +.-.++|-|.|+.++..+|..+
T Consensus 20 ~aL~e~gi-~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGL-EPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCC-CceEEEEeCHHHHHHHHHHcCC
Confidence 34444566 4668999999999999998754
No 269
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=53.95 E-value=11 Score=34.43 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=28.3
Q ss_pred eEEEEEEccChHHHHHhHhhcc-CceeeeEEecccCCC
Q 037354 129 KFYVIGVSIGSYPTWSCLKYIP-HRLAGVALIVPTINY 165 (346)
Q Consensus 129 ~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lil~~~~~~~ 165 (346)
.++.-+.|-||..++..|..-. ..|.+++...|....
T Consensus 286 ~VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~ 323 (690)
T PF10605_consen 286 LVIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNL 323 (690)
T ss_pred EEEEEeecCccHHHHhHhhcccCCceeeEEecCCccCC
Confidence 3566688899999999887643 368999988877654
No 270
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=51.83 E-value=17 Score=30.70 Aligned_cols=33 Identities=9% Similarity=0.078 Sum_probs=26.9
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhhcc
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 150 (346)
+.+.++..++ ..-.+.|-|+|+.++..+|..+.
T Consensus 29 Vl~aL~e~gi-~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGI-PIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCC-CccEEEecCHHHHHHHHHHcCCC
Confidence 4566777788 68899999999999999988643
No 271
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=51.31 E-value=24 Score=27.06 Aligned_cols=58 Identities=21% Similarity=0.315 Sum_probs=43.0
Q ss_pred ccceeecCCCceEEEEEcCCCCCCCCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCC
Q 037354 35 DAARIRLSDGRYLAYREKGVSKIESNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYG 100 (346)
Q Consensus 35 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G 100 (346)
....+.+.+|..+....++ .|+|...+...+....+.+..+.+++|+.|+++...+.+
T Consensus 54 ~~~~f~l~dG~~v~lsd~~--------lV~FwaswCp~C~~e~P~L~~l~~~~g~~Vi~Vs~D~~~ 111 (181)
T PRK13728 54 APRWFRLSNGRQVNLADWK--------VVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQG 111 (181)
T ss_pred CCCccCCCCCCEeehhHce--------EEEEECCCCHhHHHHHHHHHHHHHHcCCEEEEEEeCCCC
Confidence 4556677788776655543 777777777777777788889999999999988875443
No 272
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=50.30 E-value=14 Score=26.23 Aligned_cols=27 Identities=11% Similarity=0.183 Sum_probs=20.3
Q ss_pred CCeEEEEEcCCCCCCcccc--cchHHHHH
Q 037354 59 SNYRIVLVHGFGSSKEMNF--PASQELIE 85 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~--~~~~~l~~ 85 (346)
.+|.|+-+||+.|++..|- -+++.|..
T Consensus 51 ~KpLVlSfHG~tGtGKn~v~~liA~~ly~ 79 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTGKNFVSRLIAEHLYK 79 (127)
T ss_pred CCCEEEEeecCCCCcHHHHHHHHHHHHHh
Confidence 6889999999999998875 34444443
No 273
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=49.79 E-value=61 Score=25.54 Aligned_cols=37 Identities=11% Similarity=0.087 Sum_probs=23.4
Q ss_pred CeEEEEEcCCCCCCcc--cccchHHHHHhcCeEEEEECC
Q 037354 60 NYRIVLVHGFGSSKEM--NFPASQELIESLGIYFVLYDR 96 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~ 96 (346)
++.|.|++-.+.+... |..-.....+..|+.+..+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 5689999877777654 433333334445877776665
No 274
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=49.60 E-value=49 Score=27.33 Aligned_cols=69 Identities=17% Similarity=0.178 Sum_probs=45.1
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCC--------CC-------CCCCCcc-cHHHHHHHHHHHHHH
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGY--------GE-------SDPNPRR-TVKSEAFDIVELADQ 123 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--------G~-------S~~~~~~-~~~~~~~~l~~~l~~ 123 (346)
-|-|+|.-|.++. +++++.. ||.||.+||--- |+ -++..-| +.+.+.+-+.+.++.
T Consensus 252 vPmi~fakG~g~~-------Le~l~~t-G~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~ 323 (359)
T KOG2872|consen 252 VPMILFAKGSGGA-------LEELAQT-GYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKD 323 (359)
T ss_pred CceEEEEcCcchH-------HHHHHhc-CCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHH
Confidence 4788888776543 4677777 999999998421 21 1111112 677788888999999
Q ss_pred cCCCCeEEEEEEc
Q 037354 124 LQLGSKFYVIGVS 136 (346)
Q Consensus 124 l~~~~~~~lvGhS 136 (346)
.|..+-+.=+||.
T Consensus 324 fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 324 FGKSRYIANLGHG 336 (359)
T ss_pred hCccceEEecCCC
Confidence 9863345556664
No 275
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=49.31 E-value=87 Score=21.74 Aligned_cols=76 Identities=16% Similarity=0.149 Sum_probs=49.5
Q ss_pred EEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHH
Q 037354 62 RIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYP 141 (346)
Q Consensus 62 ~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~ 141 (346)
.||.-|| .-+......++.+.....-.+.++++. ++.+.+++.+.+.+.++.++.++.+.++.-=+||..
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~--------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~ggsp 71 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY--------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGGSP 71 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET--------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTSHH
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc--------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCCcc
Confidence 5788898 333445555566665410135555543 234789999999999998875467888777777776
Q ss_pred HHHhHh
Q 037354 142 TWSCLK 147 (346)
Q Consensus 142 a~~~a~ 147 (346)
...++.
T Consensus 72 ~n~a~~ 77 (116)
T PF03610_consen 72 FNEAAR 77 (116)
T ss_dssp HHHHHH
T ss_pred chHHHH
Confidence 555443
No 276
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=47.56 E-value=25 Score=26.64 Aligned_cols=31 Identities=13% Similarity=-0.031 Sum_probs=23.3
Q ss_pred HHHHHcCCCCeEEEEEEccChHHHHHhHhhcc
Q 037354 119 ELADQLQLGSKFYVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 119 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 150 (346)
+.+++.++ ..-.+.|-|.|+.++..++..++
T Consensus 20 ~~L~e~g~-~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGI-EIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCC-CeeEEEEeCHHHHHHHHHHcCCC
Confidence 33445566 46789999999999998887643
No 277
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=46.09 E-value=25 Score=27.84 Aligned_cols=33 Identities=15% Similarity=0.102 Sum_probs=25.1
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhhcc
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 150 (346)
+.+.+++.++ ..-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~g~-~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGI-EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCc
Confidence 3344555566 46689999999999999998764
No 278
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=45.28 E-value=1.3e+02 Score=22.46 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=39.0
Q ss_pred HHhcCe-EEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEcc-ChHHHHHhHhhc
Q 037354 84 IESLGI-YFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSI-GSYPTWSCLKYI 149 (346)
Q Consensus 84 ~~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~-Gg~~a~~~a~~~ 149 (346)
...+|. +|+.++.+... .++.+.+++.+.+++++.+. .++++|++. |.-++-++|.+.
T Consensus 54 l~~~G~d~v~~~~~~~~~------~~~~~~~a~~l~~~~~~~~~--~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 54 LAKYGADKVYHIDDPALA------EYDPEAYADALAELIKEEGP--DLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHSTTESEEEEEE-GGGT------TC-HHHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHHH
T ss_pred hhhcCCcEEEEecCcccc------ccCHHHHHHHHHHHHHhcCC--CEEEEcCcCCCCcHHHHHHHHh
Confidence 333465 47777654322 34788899999999999876 588888876 666777777664
No 279
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=45.14 E-value=1.8e+02 Score=24.13 Aligned_cols=64 Identities=14% Similarity=0.249 Sum_probs=39.8
Q ss_pred CeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEE-EEEccChHHHHHhHhhcc-CceeeeEEe
Q 037354 88 GIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYV-IGVSIGSYPTWSCLKYIP-HRLAGVALI 159 (346)
Q Consensus 88 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~l-vGhS~Gg~~a~~~a~~~p-~~v~~lil~ 159 (346)
++.++.+|-+|....+ .+..+.+.++++.... ..+++ +.-++++.-+...+..+. -.+.++|+-
T Consensus 154 ~~D~ViIDt~Gr~~~~-------~~~l~el~~~~~~~~~-~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 154 RVDYILIDTAGKNYRA-------SETVEEMIETMGQVEP-DYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred CCCEEEEECCCCCcCC-------HHHHHHHHHHHhhhCC-CeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 5789999988865322 2334445555555555 34555 445678877777776653 467788773
No 280
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=45.04 E-value=20 Score=24.96 Aligned_cols=60 Identities=18% Similarity=0.274 Sum_probs=37.3
Q ss_pred EEEEcCCCCCCcccccchHHHHHhcCeEEEEECC--CCCCCCCCCCcc--cHHHHHHHHHHHHHHc
Q 037354 63 IVLVHGFGSSKEMNFPASQELIESLGIYFVLYDR--AGYGESDPNPRR--TVKSEAFDIVELADQL 124 (346)
Q Consensus 63 vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~--~G~G~S~~~~~~--~~~~~~~~l~~~l~~l 124 (346)
+|++.|.++++.+ .++..|++.+|+.++..|- +-.+........ ......+.+.+.++.+
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 64 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDDLIREPGWIERDDDEREYIDADIDLLDDILEQL 64 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHHHHCCGTHCHGCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecceEEeccccccCcchhhHHHHHHHHHHHHHHhh
Confidence 6888999988876 4567888888999998887 544444221111 2233344445555544
No 281
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=44.62 E-value=77 Score=27.14 Aligned_cols=89 Identities=12% Similarity=0.104 Sum_probs=57.3
Q ss_pred CCeEEEEEcCCCCCCc-------ccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEE
Q 037354 59 SNYRIVLVHGFGSSKE-------MNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFY 131 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~-------~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 131 (346)
+...+|++|+-..+.. .|+.+...+.+... +-.+|....|..+. +++.-+..+.-+++. +. -+
T Consensus 196 p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~--~pffDmAYQGfaSG----~~d~DA~avR~F~~~-g~---~~ 265 (427)
T KOG1411|consen 196 PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNL--LPFFDMAYQGFASG----DLDKDAQAVRLFVED-GH---EI 265 (427)
T ss_pred CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccc--cchhhhhhcccccC----CchhhHHHHHHHHHc-CC---ce
Confidence 3446899997665554 67666555555533 55778888886655 555556666666655 22 25
Q ss_pred EEEEccChHHHHHhHhhccCceeeeEEeccc
Q 037354 132 VIGVSIGSYPTWSCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 132 lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~ 162 (346)
++..|+.-.+.+ |.+||.++-.++..
T Consensus 266 ~laQSyAKNMGL-----YgERvGa~svvc~~ 291 (427)
T KOG1411|consen 266 LLAQSYAKNMGL-----YGERVGALSVVCKD 291 (427)
T ss_pred Eeehhhhhhcch-----hhhccceeEEEecC
Confidence 667776555444 67899998777753
No 282
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=44.53 E-value=45 Score=26.09 Aligned_cols=61 Identities=15% Similarity=0.251 Sum_probs=33.8
Q ss_pred CCeEEEEEcCCCCCCcccc---cchHHHHHhcCeE--EEEECCCCCCCCCCCCcccHHHHHHHHHHHHHH
Q 037354 59 SNYRIVLVHGFGSSKEMNF---PASQELIESLGIY--FVLYDRAGYGESDPNPRRTVKSEAFDIVELADQ 123 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~---~~~~~l~~~~g~~--vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~ 123 (346)
..+|++++||.....-... .+...|.+. |.. ++.+.--|||.... ....++.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~-g~~~~~~~~p~~gH~~~~~---~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA-GKPVELLIFPGEGHGFGNP---ENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT-TSSEEEEEETT-SSSTTSH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc-CCCEEEEEcCcCCCCCCCc---hhHHHHHHHHHHHHHH
Confidence 3689999999876654333 344555544 544 44445556654422 1333555666666643
No 283
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=44.43 E-value=10 Score=33.55 Aligned_cols=38 Identities=13% Similarity=0.040 Sum_probs=27.2
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceee
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAG 155 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 155 (346)
+...+...++ .+-++.|-|.|+.+|..+|...++++..
T Consensus 91 VLkaL~E~gl-~p~vIsGTSaGAivAal~as~~~eel~~ 128 (421)
T cd07230 91 VLKALFEANL-LPRIISGSSAGSIVAAILCTHTDEEIPE 128 (421)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 3344444566 4568999999999999999876665433
No 284
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=43.78 E-value=21 Score=32.78 Aligned_cols=32 Identities=22% Similarity=0.487 Sum_probs=25.2
Q ss_pred HHHHH-HHcCCCCeEEEEEEccChHHHHHhHhhc
Q 037354 117 IVELA-DQLQLGSKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 117 l~~~l-~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
+.+++ +..|+ ++-.++|||+|=..|+..|...
T Consensus 254 La~ll~~~~GI-~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAI-KPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCC-CCCEEeecCHHHHHHHHHhCCC
Confidence 34445 57888 7899999999999988887654
No 285
>COG3933 Transcriptional antiterminator [Transcription]
Probab=43.31 E-value=94 Score=27.62 Aligned_cols=75 Identities=13% Similarity=0.226 Sum_probs=56.8
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccCh
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGS 139 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg 139 (346)
-..||..||....++ ....+.+|... + -+.++|.| -+.+..+..+.+.+.+++.+. .+=.++=..||.
T Consensus 109 v~vIiiAHG~sTASS-maevanrLL~~-~-~~~aiDMP--------Ldvsp~~vle~l~e~~k~~~~-~~GlllLVDMGS 176 (470)
T COG3933 109 VKVIIIAHGYSTASS-MAEVANRLLGE-E-IFIAIDMP--------LDVSPSDVLEKLKEYLKERDY-RSGLLLLVDMGS 176 (470)
T ss_pred eeEEEEecCcchHHH-HHHHHHHHhhc-c-ceeeecCC--------CcCCHHHHHHHHHHHHHhcCc-cCceEEEEecch
Confidence 458899999877654 44667777766 3 37899986 456899999999999999987 355666779999
Q ss_pred HHHHHhH
Q 037354 140 YPTWSCL 146 (346)
Q Consensus 140 ~~a~~~a 146 (346)
..++.=.
T Consensus 177 L~~f~~~ 183 (470)
T COG3933 177 LTSFGSI 183 (470)
T ss_pred HHHHHHH
Confidence 8876543
No 286
>PF13728 TraF: F plasmid transfer operon protein
Probab=42.55 E-value=53 Score=26.03 Aligned_cols=44 Identities=9% Similarity=-0.003 Sum_probs=36.3
Q ss_pred eEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCC
Q 037354 61 YRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDP 104 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~ 104 (346)
..++|.-|...-+..+.+++..+++++|+.|+.++.=|.+...-
T Consensus 123 gL~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~f 166 (215)
T PF13728_consen 123 GLFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPSF 166 (215)
T ss_pred EEEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcCC
Confidence 46777777777777788999999999999999999988886643
No 287
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=42.44 E-value=51 Score=27.28 Aligned_cols=52 Identities=19% Similarity=0.286 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHcCC--CCeEEEEEEccChHHHHHhH---hhccCceeeeEEecccC
Q 037354 112 SEAFDIVELADQLQL--GSKFYVIGVSIGSYPTWSCL---KYIPHRLAGVALIVPTI 163 (346)
Q Consensus 112 ~~~~~l~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a---~~~p~~v~~lil~~~~~ 163 (346)
.+.+.+.+-++.+-. .-++++.|.|+|+.-+...- ...-+++.+.++.++..
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 344444444555532 13799999999988665433 33346799999999863
No 288
>COG0218 Predicted GTPase [General function prediction only]
Probab=42.27 E-value=53 Score=25.59 Aligned_cols=30 Identities=23% Similarity=0.166 Sum_probs=18.3
Q ss_pred EEEECCCCCCCCCCCCcccHHHHHHHHHHHH
Q 037354 91 FVLYDRAGYGESDPNPRRTVKSEAFDIVELA 121 (346)
Q Consensus 91 vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l 121 (346)
+...|+||+|....+. .--+.|.+.+.+.+
T Consensus 72 ~~lVDlPGYGyAkv~k-~~~e~w~~~i~~YL 101 (200)
T COG0218 72 LRLVDLPGYGYAKVPK-EVKEKWKKLIEEYL 101 (200)
T ss_pred EEEEeCCCcccccCCH-HHHHHHHHHHHHHH
Confidence 6688999999987643 22333333444444
No 289
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=41.56 E-value=15 Score=32.10 Aligned_cols=40 Identities=13% Similarity=-0.046 Sum_probs=28.9
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeE
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVA 157 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~li 157 (346)
+...+...++ .+-++.|-|.|+.+|..+|..-++.+..++
T Consensus 101 v~kaL~e~gl-~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGL-LPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCC-CCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3445555677 466799999999999999986555554443
No 290
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=41.53 E-value=33 Score=28.15 Aligned_cols=13 Identities=23% Similarity=0.506 Sum_probs=11.6
Q ss_pred CeEEEEEEccChH
Q 037354 128 SKFYVIGVSIGSY 140 (346)
Q Consensus 128 ~~~~lvGhS~Gg~ 140 (346)
..|+++|||+|..
T Consensus 235 ~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 235 DEIIIYGHSLGEV 247 (270)
T ss_pred CEEEEEeCCCchh
Confidence 6899999999975
No 291
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=41.29 E-value=41 Score=25.43 Aligned_cols=30 Identities=13% Similarity=-0.019 Sum_probs=22.4
Q ss_pred HHHHHcCCCCeEEEEEEccChHHHHHhHhhc
Q 037354 119 ELADQLQLGSKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 119 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
+.+++.++ ..-.+.|-|.|+.++..++...
T Consensus 20 ~~L~~~~~-~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGI-PIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCC-CeeEEEEECHHHHHHHHHHcCC
Confidence 34444566 4668999999999999888653
No 292
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=41.22 E-value=1.2e+02 Score=21.40 Aligned_cols=73 Identities=14% Similarity=0.137 Sum_probs=46.5
Q ss_pred EEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHH
Q 037354 62 RIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYP 141 (346)
Q Consensus 62 ~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~ 141 (346)
.||.-|| .-+......++.+.... -.+.+++.. .+.+.+++.+.+.++++..+.++.+.++--=+||..
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~-~~i~~~~~~--------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGSp 71 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQ-ENVEAIDFP--------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGSP 71 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCC-CCeEEEEeC--------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCCH
Confidence 5778888 33333444455554432 236666653 234788899999999988865456777777778887
Q ss_pred HHHh
Q 037354 142 TWSC 145 (346)
Q Consensus 142 a~~~ 145 (346)
....
T Consensus 72 ~n~~ 75 (122)
T cd00006 72 NNAA 75 (122)
T ss_pred HHHH
Confidence 6443
No 293
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=40.61 E-value=13 Score=32.69 Aligned_cols=39 Identities=18% Similarity=0.051 Sum_probs=28.0
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeee
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGV 156 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 156 (346)
+...+...++ .+-++.|-|.|+.+|..+|...++++..+
T Consensus 85 VlkaL~e~gl-lp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDADL-LPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhCCC-CCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3344444466 46679999999999999998766666544
No 294
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=40.51 E-value=49 Score=21.11 Aligned_cols=22 Identities=27% Similarity=0.164 Sum_probs=17.8
Q ss_pred CeEEEEEEccChHHHHHhHhhc
Q 037354 128 SKFYVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 128 ~~~~lvGhS~Gg~~a~~~a~~~ 149 (346)
+++.++|-|.|=.+|.+.++.+
T Consensus 40 K~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHH
T ss_pred ceEEEEecCCcccHHHHHHHHh
Confidence 7899999999999997777664
No 295
>PRK09019 translation initiation factor Sui1; Validated
Probab=40.23 E-value=1.2e+02 Score=20.91 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=39.2
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccH-HHHHHHHHHHHHHcCC
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTV-KSEAFDIVELADQLQL 126 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~-~~~~~~l~~~l~~l~~ 126 (346)
.+..|-++-|+.........++..|.... |+|.|-.....-+ -|+.+-+.++|...+.
T Consensus 43 kGK~VTiI~Gl~~~~~dlk~l~K~lKkk~----------gcGGtvk~~~IelQGD~r~~v~~~L~~~Gf 101 (108)
T PRK09019 43 KGKGVCLITGLDLDDAELKKLAAELKKKC----------GCGGAVKDGVIEIQGDKRDLLKSLLEAKGM 101 (108)
T ss_pred CCCeEEEEeCCcCCHHHHHHHHHHHHHHh----------cCCCeEEcCEEEEcCcHHHHHHHHHHHCCC
Confidence 45699999999877777777778887763 4666644322222 2556667788888776
No 296
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=39.82 E-value=17 Score=30.67 Aligned_cols=35 Identities=20% Similarity=0.098 Sum_probs=24.7
Q ss_pred HHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCc
Q 037354 117 IVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHR 152 (346)
Q Consensus 117 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 152 (346)
+.+.+...++ .+-++.|-|.|+.+|..++...++.
T Consensus 86 VlkaL~e~gl-~p~~i~GsSaGAivaa~~~~~t~~E 120 (323)
T cd07231 86 VVRTLVEHQL-LPRVIAGSSVGSIVCAIIATRTDEE 120 (323)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCHHH
Confidence 3344444576 4667999999999999888754433
No 297
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=39.10 E-value=2.4e+02 Score=24.96 Aligned_cols=72 Identities=11% Similarity=0.125 Sum_probs=40.6
Q ss_pred CeEEEEEcCCCCCCcccc-----cchHHHHHhcCeEEEEECCCCC---CCCCCCCcccHHHHHHHHHHHHHHcCC-CCeE
Q 037354 60 NYRIVLVHGFGSSKEMNF-----PASQELIESLGIYFVLYDRAGY---GESDPNPRRTVKSEAFDIVELADQLQL-GSKF 130 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~-----~~~~~l~~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~~l~~~l~~l~~-~~~~ 130 (346)
+.+||+++.+. ..+|. .-+..|.+. |+.|+-++ +|+ |......-.+.++.++.+...+....+ ++++
T Consensus 116 ~~pvvi~Pamn--~~m~~~p~~~~Nl~~L~~~-G~~ii~P~-~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~v 191 (399)
T PRK05579 116 TAPVLVAPAMN--TQMWENPATQRNLATLRSR-GVEIIGPA-SGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRV 191 (399)
T ss_pred CCCEEEEeCCC--hhHcCCHHHHHHHHHHHHC-CCEEECCC-CccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEE
Confidence 45777777553 34454 334566554 87766443 233 333332233788888888777744322 2566
Q ss_pred EEEEE
Q 037354 131 YVIGV 135 (346)
Q Consensus 131 ~lvGh 135 (346)
.+-|-
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 66676
No 298
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=38.89 E-value=89 Score=26.00 Aligned_cols=48 Identities=19% Similarity=0.237 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHcCC--CCeEEEEEEccChHHHHHhHhhccCceeeeEEec
Q 037354 112 SEAFDIVELADQLQL--GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIV 160 (346)
Q Consensus 112 ~~~~~l~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~ 160 (346)
....-+..+++.+++ +..+.=+|..+|++ +..+|.+|..+|-|+.+-.
T Consensus 56 AQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l-~~~aA~~y~v~V~GvTlS~ 105 (283)
T COG2230 56 AQRAKLDLILEKLGLKPGMTLLDIGCGWGGL-AIYAAEEYGVTVVGVTLSE 105 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeCCChhHH-HHHHHHHcCCEEEEeeCCH
Confidence 344456677788765 45677789999886 5667777777777776544
No 299
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=37.43 E-value=1.4e+02 Score=26.24 Aligned_cols=71 Identities=14% Similarity=0.156 Sum_probs=39.2
Q ss_pred eEEEEEcCCCCCCccc-----ccchHHHHHhcCeEEEEECCCC--CCCCCCCCcccHHHHHHHHHHHHHH---cCCCCeE
Q 037354 61 YRIVLVHGFGSSKEMN-----FPASQELIESLGIYFVLYDRAG--YGESDPNPRRTVKSEAFDIVELADQ---LQLGSKF 130 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~-----~~~~~~l~~~~g~~vi~~D~~G--~G~S~~~~~~~~~~~~~~l~~~l~~---l~~~~~~ 130 (346)
.+||+++-+... +| ..-+..|.+. |+.|+-+..-- +|......-.+.+++++.+...+.. +. ++++
T Consensus 113 ~plviaPamn~~--m~~~p~~~~Nl~~L~~~-G~~vv~P~~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~-~~~v 188 (390)
T TIGR00521 113 APIILAPAMNEN--MYNNPAVQENIKRLKDD-GYIFIEPDSGLLACGDEGKGRLAEPETIVKAAEREFSPKEDLE-GKRV 188 (390)
T ss_pred CCEEEEeCCChh--hcCCHHHHHHHHHHHHC-CcEEECCCCcccccccccCCCCCCHHHHHHHHHHHHhhccccC-CceE
Confidence 467777754333 44 2344566655 86655444221 2443332334788888888877754 33 2566
Q ss_pred EEEEE
Q 037354 131 YVIGV 135 (346)
Q Consensus 131 ~lvGh 135 (346)
.+.|-
T Consensus 189 lit~g 193 (390)
T TIGR00521 189 LITAG 193 (390)
T ss_pred EEecC
Confidence 66666
No 300
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.30 E-value=42 Score=27.57 Aligned_cols=32 Identities=25% Similarity=0.103 Sum_probs=22.9
Q ss_pred HHHHHcCCCC-eEEEEEEccChHHHHHhHhhccC
Q 037354 119 ELADQLQLGS-KFYVIGVSIGSYPTWSCLKYIPH 151 (346)
Q Consensus 119 ~~l~~l~~~~-~~~lvGhS~Gg~~a~~~a~~~p~ 151 (346)
+.+.+.++ . .=.++|-|.|+.++..++.....
T Consensus 18 ~al~e~~~-~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 18 DAFLEAGI-RPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHcCC-CCCCEEEEECHHHHhHHHHHhCCcc
Confidence 33444455 3 34789999999999998887554
No 301
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=36.41 E-value=52 Score=26.34 Aligned_cols=57 Identities=7% Similarity=-0.023 Sum_probs=34.3
Q ss_pred EEEEECCCCCCCCCCCCcccHHHHHHHHHHHHH---HcCCCCeE--EEEEEccChH-HHHHhHhh
Q 037354 90 YFVLYDRAGYGESDPNPRRTVKSEAFDIVELAD---QLQLGSKF--YVIGVSIGSY-PTWSCLKY 148 (346)
Q Consensus 90 ~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~---~l~~~~~~--~lvGhS~Gg~-~a~~~a~~ 148 (346)
-|+.+|-+|...+...+-..+......+...+. .-| .++ .++|++++|. ++.-+.++
T Consensus 67 Iv~lVD~~sQa~grreEllGi~~alAhla~a~a~AR~~G--HpvI~Lv~G~A~SGaFLA~GlqA~ 129 (234)
T PF06833_consen 67 IVALVDVPSQAYGRREELLGINQALAHLAKAYALARLAG--HPVIGLVYGKAMSGAFLAHGLQAN 129 (234)
T ss_pred EEEEEeCCccccchHHHHhhHHHHHHHHHHHHHHHHHcC--CCeEEEEecccccHHHHHHHHHhc
Confidence 377899999888866554455555544443333 333 344 4789999554 55555543
No 302
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.51 E-value=71 Score=28.73 Aligned_cols=86 Identities=17% Similarity=0.196 Sum_probs=52.7
Q ss_pred cCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhH
Q 037354 67 HGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCL 146 (346)
Q Consensus 67 hG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a 146 (346)
-|++.+...-...+-..+.+.||.||.+|-.|.=.. -..+-..+..+++.-.+ +.+..||--+=|.=++.-+
T Consensus 445 kGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~-------~~~lm~~l~k~~~~~~p-d~i~~vgealvg~dsv~q~ 516 (587)
T KOG0781|consen 445 KGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHN-------NAPLMTSLAKLIKVNKP-DLILFVGEALVGNDSVDQL 516 (587)
T ss_pred hhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccC-------ChhHHHHHHHHHhcCCC-ceEEEehhhhhCcHHHHHH
Confidence 344444333333344455666999999998764333 23345556667777676 6899999888776655433
Q ss_pred hh---------ccCceeeeEEec
Q 037354 147 KY---------IPHRLAGVALIV 160 (346)
Q Consensus 147 ~~---------~p~~v~~lil~~ 160 (346)
.. .|..++++++.-
T Consensus 517 ~~fn~al~~~~~~r~id~~~ltk 539 (587)
T KOG0781|consen 517 KKFNRALADHSTPRLIDGILLTK 539 (587)
T ss_pred HHHHHHHhcCCCccccceEEEEe
Confidence 22 244677877743
No 303
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=35.48 E-value=77 Score=29.30 Aligned_cols=50 Identities=10% Similarity=0.278 Sum_probs=34.1
Q ss_pred cHHHHHHHHHHHHHHcCCCCeEEEEEE------ccChHHHHHhHhhccCceeeeEEeccc
Q 037354 109 TVKSEAFDIVELADQLQLGSKFYVIGV------SIGSYPTWSCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 109 ~~~~~~~~l~~~l~~l~~~~~~~lvGh------S~Gg~~a~~~a~~~p~~v~~lil~~~~ 162 (346)
..+.+...|.+++.. . ++++++|| |.|+.+++..-+..-.+ .+.+.++|.
T Consensus 322 RaRvis~al~d~i~e--~-d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 322 RARVISTALSDIIKE--S-DNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHHhh--c-CcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 344455555555555 3 69999999 78999998766554444 677777764
No 304
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=35.42 E-value=1.2e+02 Score=22.46 Aligned_cols=49 Identities=24% Similarity=0.220 Sum_probs=32.5
Q ss_pred CeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHh
Q 037354 88 GIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSC 145 (346)
Q Consensus 88 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 145 (346)
|-.|+++|.+|-- .+-+++++.+..+.+. | .+-.+++|-|.|=.-++..
T Consensus 67 ~~~vi~Ld~~Gk~-------~sSe~fA~~l~~~~~~-G-~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 67 GSYVVLLDIRGKA-------LSSEEFADFLERLRDD-G-RDISFLIGGADGLSEAVKA 115 (155)
T ss_pred CCeEEEEecCCCc-------CChHHHHHHHHHHHhc-C-CeEEEEEeCcccCCHHHHH
Confidence 4569999998733 3566777776665443 3 2467888999886555544
No 305
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=34.41 E-value=66 Score=27.28 Aligned_cols=19 Identities=21% Similarity=0.293 Sum_probs=16.4
Q ss_pred EEEEEccChHHHHHhHhhc
Q 037354 131 YVIGVSIGSYPTWSCLKYI 149 (346)
Q Consensus 131 ~lvGhS~Gg~~a~~~a~~~ 149 (346)
.+.|-|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5779999999999998754
No 306
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=34.35 E-value=2.1e+02 Score=22.25 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=40.8
Q ss_pred CeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccC--ceeeeEEe
Q 037354 88 GIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPH--RLAGVALI 159 (346)
Q Consensus 88 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lil~ 159 (346)
++.+|.+|-+|.... -.+..+.+..+++.... ..+++|=-+..+.-.+..+..+-+ .+.++|+-
T Consensus 83 ~~D~vlIDT~Gr~~~-------d~~~~~el~~~~~~~~~-~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 83 GYDLVLIDTAGRSPR-------DEELLEELKKLLEALNP-DEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp TSSEEEEEE-SSSST-------HHHHHHHHHHHHHHHSS-SEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred CCCEEEEecCCcchh-------hHHHHHHHHHHhhhcCC-ccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 688999999876532 34556667777777765 567766666666666554444322 47888874
No 307
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=34.22 E-value=1.4e+02 Score=25.31 Aligned_cols=72 Identities=15% Similarity=0.158 Sum_probs=43.1
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCC--CCCCC----CC------------------CCcccHHHHHH
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRA--GYGES----DP------------------NPRRTVKSEAF 115 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~--G~G~S----~~------------------~~~~~~~~~~~ 115 (346)
.+.++++-|-.+++.. .++..|++.++..+|..|-. ..|.+ .+ ...++..++.+
T Consensus 3 ~~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~ 80 (307)
T PRK00091 3 KPKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQR 80 (307)
T ss_pred CceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHH
Confidence 3468888888887755 55677887777778877763 11111 11 11246778888
Q ss_pred HHHHHHHHc-CCCCeEEEE
Q 037354 116 DIVELADQL-QLGSKFYVI 133 (346)
Q Consensus 116 ~l~~~l~~l-~~~~~~~lv 133 (346)
+....++.. .-++..+++
T Consensus 81 ~a~~~i~~i~~~gk~pIlv 99 (307)
T PRK00091 81 DALAAIADILARGKLPILV 99 (307)
T ss_pred HHHHHHHHHHhCCCCEEEE
Confidence 777777654 222344555
No 308
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=34.14 E-value=79 Score=25.46 Aligned_cols=85 Identities=13% Similarity=0.053 Sum_probs=43.4
Q ss_pred CeEEEEEcCCCCC--CcccccchHHHHHhcCeEEEEECCCCCCC---CCCC----CcccHHHHHH-----HHHHHHH-Hc
Q 037354 60 NYRIVLVHGFGSS--KEMNFPASQELIESLGIYFVLYDRAGYGE---SDPN----PRRTVKSEAF-----DIVELAD-QL 124 (346)
Q Consensus 60 ~~~vl~lhG~~~~--~~~~~~~~~~l~~~~g~~vi~~D~~G~G~---S~~~----~~~~~~~~~~-----~l~~~l~-~l 124 (346)
++.|+|++=.+.. ...|........++.|+.|..++...--. .... ...+...+.+ .+.+.++ .+
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~ 110 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAV 110 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHH
Confidence 5689999876633 33444333444445688888887652100 0000 0011111111 1233332 33
Q ss_pred CCCCeEEEEEEccChHHHHHhH
Q 037354 125 QLGSKFYVIGVSIGSYPTWSCL 146 (346)
Q Consensus 125 ~~~~~~~lvGhS~Gg~~a~~~a 146 (346)
. +...++|.|.|+.++....
T Consensus 111 ~--~G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 111 K--NGTPYIGWSAGANVAGPTI 130 (233)
T ss_pred H--CCCEEEEECHHHHhhhccc
Confidence 2 3467999999998865433
No 309
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=33.96 E-value=1.3e+02 Score=23.68 Aligned_cols=83 Identities=14% Similarity=0.076 Sum_probs=45.8
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhc-CeEEEEECCCCCCCCCCC-----------CcccHHHHHHH-----HHHHH
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESL-GIYFVLYDRAGYGESDPN-----------PRRTVKSEAFD-----IVELA 121 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~-----------~~~~~~~~~~~-----l~~~l 121 (346)
..+.|+|++=.+.....|........++. |+.+..++... ..+.. +..+...+.+. +.+++
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l 107 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAIL 107 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHH
Confidence 45688898877665444444444445566 78888777543 11100 00122222222 33334
Q ss_pred HHcCCCCeEEEEEEccChHHHHH
Q 037354 122 DQLQLGSKFYVIGVSIGSYPTWS 144 (346)
Q Consensus 122 ~~l~~~~~~~lvGhS~Gg~~a~~ 144 (346)
+..-. +...++|.|.|+.+...
T Consensus 108 ~~~~~-~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 108 KAALE-RGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHH-CCCEEEEECHhHHhhCC
Confidence 33212 35789999999998766
No 310
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=33.84 E-value=50 Score=26.55 Aligned_cols=33 Identities=15% Similarity=0.066 Sum_probs=23.1
Q ss_pred HHHHHHcCCC-CeEEEEEEccChHHHHHhHhhcc
Q 037354 118 VELADQLQLG-SKFYVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 118 ~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p 150 (346)
.+.+.+.++. +.-.+.|-|.|+.++..++...+
T Consensus 18 l~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 18 LSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3444445552 13479999999999999988654
No 311
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=33.77 E-value=1.4e+02 Score=22.64 Aligned_cols=62 Identities=10% Similarity=0.121 Sum_probs=40.9
Q ss_pred EEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEcc-ChHHHHHhHhhccC-ceeeeEEe
Q 037354 90 YFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSI-GSYPTWSCLKYIPH-RLAGVALI 159 (346)
Q Consensus 90 ~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~-Gg~~a~~~a~~~p~-~v~~lil~ 159 (346)
+|+..+-+.. ..++.+.+++.|.++++..+. .++++|++. |+.++-++|.+..- .+..++-+
T Consensus 62 ~v~~~~~~~~------~~~~~~~~a~~l~~~i~~~~p--~~Vl~g~t~~g~~la~rlA~~L~~~~vsdv~~l 125 (181)
T cd01985 62 KVLLVEDPAL------AGYDPEATAKALAALIKKEKP--DLILAGATSIGKQLAPRVAALLGVPQISDVTKL 125 (181)
T ss_pred EEEEEecCcc------cCCChHHHHHHHHHHHHHhCC--CEEEECCcccccCHHHHHHHHhCCCcceeEEEE
Confidence 4666654322 245788899999999988774 677777765 77788888876432 34444433
No 312
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=32.89 E-value=49 Score=28.49 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=29.0
Q ss_pred CccccceeecCCCceEEEEEcCCCCC--------CCCeEEEEEcCCCCC
Q 037354 32 GLVDAARIRLSDGRYLAYREKGVSKI--------ESNYRIVLVHGFGSS 72 (346)
Q Consensus 32 ~~~~~~~~~~~~g~~l~~~~~g~~~~--------~~~~~vl~lhG~~~~ 72 (346)
.+++.-.-...||.++-|.++|.+++ -++|.|+++|-+...
T Consensus 449 ~pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 449 HPFEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred ChHHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 34455555566899999999996542 257888888977554
No 313
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=32.11 E-value=49 Score=24.65 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=23.6
Q ss_pred CeEEEEEcCCCCCCcccc--cchHHHHHhcCeEEEEECC
Q 037354 60 NYRIVLVHGFGSSKEMNF--PASQELIESLGIYFVLYDR 96 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~--~~~~~l~~~~g~~vi~~D~ 96 (346)
++.||++-|++++...-- .+...|.+. |+.|+.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~-g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFAR-GIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHT-TS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHc-CCcEEEecC
Confidence 368999999999886521 333444444 888999973
No 314
>PRK04148 hypothetical protein; Provisional
Probab=31.99 E-value=1.6e+02 Score=21.33 Aligned_cols=45 Identities=16% Similarity=-0.071 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecc
Q 037354 112 SEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVP 161 (346)
Q Consensus 112 ~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 161 (346)
++++.|.+.+..... .++..+|...|..+|..++.. . ..++.++-
T Consensus 3 ~i~~~l~~~~~~~~~-~kileIG~GfG~~vA~~L~~~-G---~~ViaIDi 47 (134)
T PRK04148 3 TIAEFIAENYEKGKN-KKIVELGIGFYFKVAKKLKES-G---FDVIVIDI 47 (134)
T ss_pred HHHHHHHHhcccccC-CEEEEEEecCCHHHHHHHHHC-C---CEEEEEEC
Confidence 344444443333222 579999999888888887754 2 35666664
No 315
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=31.78 E-value=1.4e+02 Score=25.80 Aligned_cols=61 Identities=18% Similarity=0.120 Sum_probs=35.5
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCC
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQL 126 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~ 126 (346)
..+|+.+.|.-.++ +...|..+.||.|+.+-+.-+..+.. ..-+..+-.+|...+.+.+|+
T Consensus 4 ~kV~v~mSGGVDSS-----VaA~lLk~QGyeViGl~m~~~~~~~~-~~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 4 KKVLVGMSGGVDSS-----VAAYLLKEQGYEVIGLFMKNWDEDGG-GGCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred cEEEEEccCCHHHH-----HHHHHHHHcCCeEEEEEEEeeccCCC-CcCCchhHHHHHHHHHHHhCC
Confidence 34666666554443 34566666799999987776554111 111344445566666677765
No 316
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=31.08 E-value=46 Score=27.90 Aligned_cols=32 Identities=16% Similarity=-0.044 Sum_probs=23.1
Q ss_pred HHHcCCCCeEEEEEEccChHHHHHhHhhccCce
Q 037354 121 ADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRL 153 (346)
Q Consensus 121 l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 153 (346)
+...++ .+-++.|.|.|+.+|..++....+++
T Consensus 91 L~e~~l-~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 91 LWEQDL-LPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHcCC-CCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 334455 35679999999999999987644444
No 317
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=31.06 E-value=92 Score=23.41 Aligned_cols=55 Identities=13% Similarity=0.103 Sum_probs=38.6
Q ss_pred Ce-EEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEcc-ChHHHHHhHhhcc
Q 037354 88 GI-YFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSI-GSYPTWSCLKYIP 150 (346)
Q Consensus 88 g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~-Gg~~a~~~a~~~p 150 (346)
|. +|+.++.+.. ..++.+.+++.+.++++..+. .++|+|+|. |..++-++|.+..
T Consensus 51 Gad~v~~~~~~~~------~~~~~~~~a~al~~~i~~~~p--~~Vl~~~t~~g~~la~rlAa~L~ 107 (168)
T cd01715 51 GADKVLVAEDPAL------AHYLAEPYAPALVALAKKEKP--SHILAGATSFGKDLAPRVAAKLD 107 (168)
T ss_pred CCCEEEEecChhh------cccChHHHHHHHHHHHHhcCC--CEEEECCCccccchHHHHHHHhC
Confidence 44 4666654321 235788899999999988774 677777765 7778888887754
No 318
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=31.00 E-value=1.1e+02 Score=22.71 Aligned_cols=62 Identities=16% Similarity=0.141 Sum_probs=34.2
Q ss_pred CeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 88 GIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 88 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
+-.+|++|-.|- ..+-+++++.|..+...-.- +-++++|-|.|=.-.+. ++.+..+.+++.+
T Consensus 67 ~~~~i~Ld~~Gk-------~~sS~~fA~~l~~~~~~g~~-~i~F~IGG~~G~~~~~~------~~a~~~lSLS~mT 128 (155)
T PF02590_consen 67 NDYVILLDERGK-------QLSSEEFAKKLERWMNQGKS-DIVFIIGGADGLSEEVR------KRADEKLSLSKMT 128 (155)
T ss_dssp TSEEEEE-TTSE-------E--HHHHHHHHHHHHHTTS--EEEEEE-BTTB--HHHH------HH-SEEEES-SS-
T ss_pred CCEEEEEcCCCc-------cCChHHHHHHHHHHHhcCCc-eEEEEEecCCCCCHHHH------hhcCceEEEecCC
Confidence 455899998763 34677888888887766332 46789999998433222 2344566666643
No 319
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=30.94 E-value=70 Score=17.92 Aligned_cols=32 Identities=16% Similarity=0.029 Sum_probs=21.4
Q ss_pred cCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHH
Q 037354 87 LGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELAD 122 (346)
Q Consensus 87 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~ 122 (346)
.+|.+.++|++|+--. +.+.++..+.+.+.+.
T Consensus 12 ~~y~~~~pdlpg~~t~----G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFTQ----GDTLEEALENAKEALE 43 (48)
T ss_dssp SSEEEEETTCCTCEEE----ESSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhhc----CCCHHHHHHHHHHHHH
Confidence 3788999999987522 2266766666666554
No 320
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=30.80 E-value=1.1e+02 Score=23.09 Aligned_cols=72 Identities=17% Similarity=0.032 Sum_probs=38.9
Q ss_pred EEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCC-------CCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEc
Q 037354 64 VLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESD-------PNPRRTVKSEAFDIVELADQLQLGSKFYVIGVS 136 (346)
Q Consensus 64 l~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~-------~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS 136 (346)
|++.|.|++...-..++.+|..+ |+.-.+-+|.--.|. ...+|.++.. ....++.++. ..=+|+|.|
T Consensus 44 vl~cGNGgSaadAqHfaael~gR--f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~-~GDvLigIS 117 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR--FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQ-PGDVLIGIS 117 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH--HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCC-CCCEEEEEe
Confidence 45667887777666777777765 333333333332231 1123444433 2344455554 344788999
Q ss_pred cChHH
Q 037354 137 IGSYP 141 (346)
Q Consensus 137 ~Gg~~ 141 (346)
-.|.-
T Consensus 118 TSGNS 122 (176)
T COG0279 118 TSGNS 122 (176)
T ss_pred CCCCC
Confidence 88753
No 321
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.57 E-value=80 Score=26.57 Aligned_cols=35 Identities=23% Similarity=0.155 Sum_probs=27.5
Q ss_pred HHHHHHHHHHcCC---CCeEEEEEEc--cChHHHHHhHhh
Q 037354 114 AFDIVELADQLQL---GSKFYVIGVS--IGSYPTWSCLKY 148 (346)
Q Consensus 114 ~~~l~~~l~~l~~---~~~~~lvGhS--~Gg~~a~~~a~~ 148 (346)
+..+.+++++.++ ++.+.++|.| ||..++..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 5567788887764 5789999997 888888888764
No 322
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=29.78 E-value=2.5e+02 Score=21.30 Aligned_cols=53 Identities=21% Similarity=0.252 Sum_probs=35.8
Q ss_pred HHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccC
Q 037354 83 LIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIG 138 (346)
Q Consensus 83 l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~G 138 (346)
|.+. |++.+.+|.=++=-. +....-..++.+.+.++.+..+. +++.++.-|.|
T Consensus 36 Lk~~-Gik~li~DkDNTL~~-~~~~~i~~~~~~~~~~l~~~~~~-~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKK-GIKALIFDKDNTLTP-PYEDEIPPEYAEWLNELKKQFGK-DRVLIVSNSAG 88 (168)
T ss_pred hhhc-CceEEEEcCCCCCCC-CCcCcCCHHHHHHHHHHHHHCCC-CeEEEEECCCC
Confidence 4444 999999998655222 21222345666677777777665 58999999986
No 323
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=29.61 E-value=2.7e+02 Score=21.54 Aligned_cols=112 Identities=11% Similarity=0.068 Sum_probs=65.4
Q ss_pred cceeecCCCceEEEEEcCCCCCCCCe-EEEEEcCCCCCCcccccchHHHHHhcCeEE------EEECCCCCCCCCCCCcc
Q 037354 36 AARIRLSDGRYLAYREKGVSKIESNY-RIVLVHGFGSSKEMNFPASQELIESLGIYF------VLYDRAGYGESDPNPRR 108 (346)
Q Consensus 36 ~~~~~~~~g~~l~~~~~g~~~~~~~~-~vl~lhG~~~~~~~~~~~~~~l~~~~g~~v------i~~D~~G~G~S~~~~~~ 108 (346)
...+.+ +|.++.|..+....-..+. .|-++-|+...++...+++..+.++ |+.+ +.++. +.
T Consensus 37 ~ge~~~-~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~-~~~~~~y~~t~~IN~----------dd 104 (184)
T TIGR01626 37 YGEIVL-SGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAA-KFPPVKYQTTTIINA----------DD 104 (184)
T ss_pred CceEEE-cCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHc-CCCcccccceEEEEC----------cc
Confidence 345556 5668999988765433332 4445668888888888999999766 7666 55542 11
Q ss_pred cHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCce-eeeEEeccc
Q 037354 109 TVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRL-AGVALIVPT 162 (346)
Q Consensus 109 ~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v-~~lil~~~~ 162 (346)
........+..+++..+.+-++..+...-.|.++..+... .+ ..+++++.-
T Consensus 105 ~~~~~~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~gv~---~~P~T~fVIDk~ 156 (184)
T TIGR01626 105 AIVGTGMFVKSSAKKGKKENPWSQVVLDDKGAVKNAWQLN---SEDSAIIVLDKT 156 (184)
T ss_pred chhhHHHHHHHHHHHhcccCCcceEEECCcchHHHhcCCC---CCCceEEEECCC
Confidence 2333444566677776653343344444456555544432 22 233566654
No 324
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=28.62 E-value=1.7e+02 Score=21.84 Aligned_cols=60 Identities=17% Similarity=0.122 Sum_probs=35.4
Q ss_pred EEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 90 YFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 90 ~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
.+|++|-+|-- .+-.++++.+......- ..+-++++|-+.|=.-.+. ++.+..+.+++.+
T Consensus 69 ~~i~LDe~Gk~-------~sS~~fA~~l~~~~~~g-~~~i~F~IGGa~G~~~~v~------~~a~~~lSLS~mT 128 (157)
T PRK00103 69 RVIALDERGKQ-------LSSEEFAQELERWRDDG-RSDVAFVIGGADGLSPAVK------KRADQSLSLSKLT 128 (157)
T ss_pred EEEEEcCCCCc-------CCHHHHHHHHHHHHhcC-CccEEEEEcCccccCHHHH------HhcCceEEeccCC
Confidence 48999987643 35667777777664432 2246778898877433322 2233445566543
No 325
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=28.10 E-value=81 Score=25.55 Aligned_cols=20 Identities=20% Similarity=0.177 Sum_probs=17.7
Q ss_pred EEEEEccChHHHHHhHhhcc
Q 037354 131 YVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 131 ~lvGhS~Gg~~a~~~a~~~p 150 (346)
.+.|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999988654
No 326
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=27.82 E-value=68 Score=28.96 Aligned_cols=56 Identities=16% Similarity=0.116 Sum_probs=36.0
Q ss_pred EEEEecCCCCCCchhHHHHHHHhc------CC-ceEEEecCCCcceeec-cchhHHHHHHHhhcc
Q 037354 280 VHIWQGYEDKVVPFQLQRFISRKL------SW-IKYHEVRDGGHLILHY-NGMCDYFLRALLVGE 336 (346)
Q Consensus 280 vlii~G~~D~~~~~~~~~~~~~~~------~~-~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 336 (346)
++...|=.|..+|+-....-.+.+ .+ ..+.+++ +||++.++ |+...+.+..|+...
T Consensus 428 w~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 428 WLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred EeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCChHHHHHHHHHHHhhc
Confidence 555556666666554442222222 22 3455565 79999998 999999999998753
No 327
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=27.75 E-value=2.2e+02 Score=23.46 Aligned_cols=74 Identities=19% Similarity=0.248 Sum_probs=43.1
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCe-EEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEE-EEEc
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGI-YFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYV-IGVS 136 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~l-vGhS 136 (346)
.+.||++--|...+...|...++.+... |- .++.... |. |.-.+.....--...+..+-+..+. ++.+ -+||
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~-Gn~~i~l~~r-G~--s~y~~~~~~~~dl~~i~~lk~~~~~--pV~~ds~Hs 204 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSS-GNGNVILCER-GI--RTFEKATRNTLDLSAVPVLKKETHL--PIIVDPSHA 204 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHc-CCCcEEEEEC-CC--CCCCCCCcCCcCHHHHHHHHHhhCC--CEEEcCCCC
Confidence 4669999999998999999888888765 43 4555543 32 2210100011111222233333454 7777 7999
Q ss_pred cC
Q 037354 137 IG 138 (346)
Q Consensus 137 ~G 138 (346)
.|
T Consensus 205 ~G 206 (260)
T TIGR01361 205 AG 206 (260)
T ss_pred CC
Confidence 88
No 328
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=27.28 E-value=1.3e+02 Score=25.07 Aligned_cols=80 Identities=21% Similarity=0.175 Sum_probs=42.5
Q ss_pred EEEEcCCCCCCcccc-cchHHHHHhcCe-------EEEEECCCCCCCCCCCC-cccHHHHH--------HHHHHHHHHcC
Q 037354 63 IVLVHGFGSSKEMNF-PASQELIESLGI-------YFVLYDRAGYGESDPNP-RRTVKSEA--------FDIVELADQLQ 125 (346)
Q Consensus 63 vl~lhG~~~~~~~~~-~~~~~l~~~~g~-------~vi~~D~~G~G~S~~~~-~~~~~~~~--------~~l~~~l~~l~ 125 (346)
-+++.|.|...-.-. .+...+..+ |. +++.+|..|-=..+... ...-..++ .+|.++++.++
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~-G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVRE-GLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHc-CCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 344555554443333 333333332 55 78999998863333221 11122222 35777777765
Q ss_pred CCCeEEEEEEcc-ChHHHHHhH
Q 037354 126 LGSKFYVIGVSI-GSYPTWSCL 146 (346)
Q Consensus 126 ~~~~~~lvGhS~-Gg~~a~~~a 146 (346)
. -+++|.|- ||.+.-...
T Consensus 106 p---tvlIG~S~~~g~ft~evv 124 (279)
T cd05312 106 P---TVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred C---CEEEEeCCCCCCCCHHHH
Confidence 4 48999995 776554433
No 329
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=26.84 E-value=1.8e+02 Score=21.70 Aligned_cols=59 Identities=17% Similarity=0.032 Sum_probs=35.8
Q ss_pred EEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 90 YFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 90 ~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
.||++|-+|-- .+-.++++.|..+.+. +. +-++++|-+.|=.-.+.- +.+..+.+++.+
T Consensus 67 ~~i~LDe~Gk~-------~sS~~fA~~l~~~~~~-g~-~i~FvIGGa~G~~~~v~~------~a~~~lSLS~mT 125 (153)
T TIGR00246 67 HVVTLDIPGKP-------WTTPQLADTLEKWKTD-GR-DVTLLIGGPEGLSPTCKA------AAEQSWSLSKLT 125 (153)
T ss_pred eEEEEcCCCCc-------CCHHHHHHHHHHHhcc-CC-eEEEEEcCCCcCCHHHHH------hcCceEEeecCC
Confidence 48999988743 3566777777776433 32 467788988874433322 233445566543
No 330
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=26.81 E-value=1e+02 Score=19.35 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=20.6
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEE
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLY 94 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~ 94 (346)
.|.++++||..... -+.++...+++.|+.++.+
T Consensus 31 ~~~~~lvhGga~~G--aD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAPKG--ADRIAARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCCCC--HHHHHHHHHHHCCCeeEEe
Confidence 35778888866221 3355667777777766554
No 331
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,]. The PP-loop motif appears to be a modified version of the P-loop of nucleotide binding domain that is involved in phosphate binding []. Named PP-motif, since it appears to be a part of a previously uncharacterised ATP pyrophophatase domain. ATP sulfurylases, Escherichia coli NtrL, and Bacillus subtilis OutB consist of this domain alone. In other proteins, the pyrophosphatase domain is associated with amidotransferase domains (type I or type II), a putative citrulline-aspartate ligase domain or a nitrilase/amidase domain.; PDB: 3A2K_A 2E89_B 2E21_D 1WY5_B 1NI5_A.
Probab=26.77 E-value=1.8e+02 Score=22.16 Aligned_cols=79 Identities=15% Similarity=0.189 Sum_probs=41.8
Q ss_pred EEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHH-----HHHHHHcCCCCeEEEEEEc
Q 037354 62 RIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDI-----VELADQLQLGSKFYVIGVS 136 (346)
Q Consensus 62 ~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l-----~~~l~~l~~~~~~~lvGhS 136 (346)
++-+=||+...+..+...+..+.+.+|+..+..+..- ......+.+..+..+ .++....+. ..+++||-
T Consensus 32 ~~~vdh~~~~~s~~~~~~v~~~~~~~~i~~~~~~~~~----~~~~~~~~e~~aR~~Ry~~l~~~a~~~g~--~~i~~GHh 105 (182)
T PF01171_consen 32 AVHVDHGLREESDEEAEFVEEICEQLGIPLYIVRIDE----DRKKGSNIEECARELRYQFLREIAKEEGC--NKIALGHH 105 (182)
T ss_dssp EEEEE-STSCCHHHHHHHHHHHHHHTT-EEEEEE--C----HCCTTSTCHHHHHHHHHHHHHHHHHTTT---CEEE---B
T ss_pred EEEEecCCCcccchhHHHHHHHHHhcCCceEEEEeee----eecccCCHHHHHHHHHHHHHHHhhhcccc--cceeecCc
Confidence 4455578887666677778888888776666555543 111122344444433 344455554 67899999
Q ss_pred cChHHHHHhH
Q 037354 137 IGSYPTWSCL 146 (346)
Q Consensus 137 ~Gg~~a~~~a 146 (346)
+-=.+-..+.
T Consensus 106 ~dD~~ET~l~ 115 (182)
T PF01171_consen 106 LDDQAETFLM 115 (182)
T ss_dssp HHHHHHHHHH
T ss_pred CCccHHHHHH
Confidence 8776654443
No 332
>PLN02840 tRNA dimethylallyltransferase
Probab=26.75 E-value=3e+02 Score=24.57 Aligned_cols=75 Identities=17% Similarity=0.204 Sum_probs=45.9
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCC----CC--CCCC------------------CCCcccHHHHHH
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRA----GY--GESD------------------PNPRRTVKSEAF 115 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~--G~S~------------------~~~~~~~~~~~~ 115 (346)
+..+|++-|..+++.. .++..|++.++..+|..|-. |. |-.. +...++..++.+
T Consensus 20 ~~~vi~I~GptgsGKT--tla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F~~ 97 (421)
T PLN02840 20 KEKVIVISGPTGAGKS--RLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAFFD 97 (421)
T ss_pred CCeEEEEECCCCCCHH--HHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHHHH
Confidence 3457777777777654 45567777766667777752 22 1111 112357888988
Q ss_pred HHHHHHHHcC-CCCeEEEEEEc
Q 037354 116 DIVELADQLQ-LGSKFYVIGVS 136 (346)
Q Consensus 116 ~l~~~l~~l~-~~~~~~lvGhS 136 (346)
+..+.++.+. -++..+|||-+
T Consensus 98 ~A~~~I~~i~~rgkiPIvVGGT 119 (421)
T PLN02840 98 DARRATQDILNRGRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHhcCCCEEEEcCc
Confidence 8888887652 22455677733
No 333
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=26.68 E-value=33 Score=28.26 Aligned_cols=33 Identities=24% Similarity=0.098 Sum_probs=22.5
Q ss_pred EEEEEcCCCCCCcccccchHHHHHhcCeEEEEEC
Q 037354 62 RIVLVHGFGSSKEMNFPASQELIESLGIYFVLYD 95 (346)
Q Consensus 62 ~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D 95 (346)
.||++|....+......++..|.++ ||+++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~k-Gy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEK-GYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHC-CCEEEeHH
Confidence 5778887655555556667777766 88877664
No 334
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=26.57 E-value=3.9e+02 Score=22.52 Aligned_cols=94 Identities=18% Similarity=0.174 Sum_probs=53.1
Q ss_pred EEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcc------------------------cHHHHHHHHH
Q 037354 63 IVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRR------------------------TVKSEAFDIV 118 (346)
Q Consensus 63 vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~------------------------~~~~~~~~l~ 118 (346)
.|++-|...+...-..++..+.+..|-.++.+|.---++.....++ -+..+++.+.
T Consensus 4 rIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~~ 83 (401)
T COG5441 4 RIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAFV 83 (401)
T ss_pred eEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHHH
Confidence 4455555555544434445555555777887776432222111111 2334444444
Q ss_pred HHHHHc-CCCCeEEEEEEccChHHHHHhHhhccCceeeeE
Q 037354 119 ELADQL-QLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVA 157 (346)
Q Consensus 119 ~~l~~l-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~li 157 (346)
.++..- ++ .-++-+|-|.|..++.-.+.+.|--+-+++
T Consensus 84 r~l~sR~dV-~gmig~GGsgGT~lit~~m~~LPlgvPK~m 122 (401)
T COG5441 84 RFLSSRGDV-AGMIGMGGSGGTALITPAMRRLPLGVPKVM 122 (401)
T ss_pred HHhhcccch-hheeecCCCcchHhhhhHHHhcCcCCccee
Confidence 444433 34 467888999999998888888776555544
No 335
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=26.22 E-value=2.5e+02 Score=22.17 Aligned_cols=27 Identities=15% Similarity=0.028 Sum_probs=17.1
Q ss_pred HHHHHHHHHHcCCCCeEEEEEEccChHH
Q 037354 114 AFDIVELADQLQLGSKFYVIGVSIGSYP 141 (346)
Q Consensus 114 ~~~l~~~l~~l~~~~~~~lvGhS~Gg~~ 141 (346)
.+.|...++..+- -..+++-||+||..
T Consensus 111 ~~~ir~~~e~~d~-~~~~~i~~slgGGT 137 (216)
T PF00091_consen 111 LEQIRKEIEKCDS-LDGFFIVHSLGGGT 137 (216)
T ss_dssp HHHHHHHHHTSTT-ESEEEEEEESSSSH
T ss_pred ccccchhhccccc-cccceeccccccee
Confidence 3344444444454 47889999998874
No 336
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=25.90 E-value=26 Score=27.03 Aligned_cols=33 Identities=24% Similarity=0.272 Sum_probs=19.6
Q ss_pred EEEEEcCC---CCCCcccccchHHHHHhcCeEEEEEC
Q 037354 62 RIVLVHGF---GSSKEMNFPASQELIESLGIYFVLYD 95 (346)
Q Consensus 62 ~vl~lhG~---~~~~~~~~~~~~~l~~~~g~~vi~~D 95 (346)
.||++|.. ..+......+++.|.++ ||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~-Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEK-GYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHC-CCEEEEHH
Confidence 58888842 22233444566666665 88877664
No 337
>PRK14974 cell division protein FtsY; Provisional
Probab=25.77 E-value=3.8e+02 Score=23.12 Aligned_cols=65 Identities=17% Similarity=0.157 Sum_probs=41.8
Q ss_pred cCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhcc--CceeeeEEe
Q 037354 87 LGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIP--HRLAGVALI 159 (346)
Q Consensus 87 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lil~ 159 (346)
.++.++.+|-.|.... -.++.+.+..+.+..+. ..+++|.-+.-|.-++.-+..+. -.+.++|+.
T Consensus 221 ~~~DvVLIDTaGr~~~-------~~~lm~eL~~i~~~~~p-d~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 221 RGIDVVLIDTAGRMHT-------DANLMDELKKIVRVTKP-DLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCCEEEEECCCccCC-------cHHHHHHHHHHHHhhCC-ceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 3678899998866543 23445556666666666 56777777777766666555443 357777774
No 338
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=25.67 E-value=1.8e+02 Score=24.06 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=29.6
Q ss_pred EEEEecCCCCCCchhHHHHHHHhcCCceEEEecC-CCcceee-c-cchhHHHHHHHh
Q 037354 280 VHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRD-GGHLILH-Y-NGMCDYFLRALL 333 (346)
Q Consensus 280 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~-e-~~~~~~~i~~fl 333 (346)
|+++.|++ ...++..+.+|+++.+.++. .|++.-. - |++..+.|.+-.
T Consensus 150 V~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa 200 (270)
T cd08769 150 VVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAV 200 (270)
T ss_pred EEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHH
Confidence 99998876 33455666779998887765 4443333 2 555555554433
No 339
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=25.52 E-value=2.8e+02 Score=23.54 Aligned_cols=74 Identities=16% Similarity=0.244 Sum_probs=47.8
Q ss_pred eEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECC----CCC----CCCC----------------CCCcccHHHHHHH
Q 037354 61 YRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDR----AGY----GESD----------------PNPRRTVKSEAFD 116 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~----~G~----G~S~----------------~~~~~~~~~~~~~ 116 (346)
+.++++-|-.+++.+ .++-.|++++|-.||..|- +|. ++-+ +...+|..++.++
T Consensus 3 ~~~i~I~GPTAsGKT--~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~~ 80 (308)
T COG0324 3 PKLIVIAGPTASGKT--ALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQRD 80 (308)
T ss_pred ccEEEEECCCCcCHH--HHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHHH
Confidence 567778787777765 4556888888888999884 332 2221 1123577888888
Q ss_pred HHHHHHHcCC-CCeEEEEEEc
Q 037354 117 IVELADQLQL-GSKFYVIGVS 136 (346)
Q Consensus 117 l~~~l~~l~~-~~~~~lvGhS 136 (346)
....++...- ++-.++||-|
T Consensus 81 a~~~i~~i~~rgk~pIlVGGT 101 (308)
T COG0324 81 ALAAIDDILARGKLPILVGGT 101 (308)
T ss_pred HHHHHHHHHhCCCCcEEEccH
Confidence 8887766532 2456777743
No 340
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=25.29 E-value=1.5e+02 Score=22.29 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHcC-CCCeEEEEEEccChHHHHHhHhhccCceeeeEEecc
Q 037354 110 VKSEAFDIVELADQLQ-LGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVP 161 (346)
Q Consensus 110 ~~~~~~~l~~~l~~l~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 161 (346)
.++.-+.+.++++.+. -++++.++|-|..|...+.++...++.|..++=.+|
T Consensus 50 ~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 50 VEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3444444555554442 236899999999999888888776676777665554
No 341
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=25.26 E-value=39 Score=30.24 Aligned_cols=55 Identities=18% Similarity=0.050 Sum_probs=38.4
Q ss_pred EEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeeccchhHHHHHHHhhcccc
Q 037354 281 HIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHYNGMCDYFLRALLVGEES 338 (346)
Q Consensus 281 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~~~~~~~i~~fl~~~~~ 338 (346)
-++.|+.|..|+.+..+... +..+....++ +.|..++..+++.+.|..||+.-+.
T Consensus 370 ~~~y~dGDGTV~~~S~~~~~--~~~~~~~~l~-~~H~~il~n~~v~~~I~~fL~~g~f 424 (440)
T PLN02733 370 EYTYVDGDGTVPVESAKADG--LNAVARVGVP-GDHRGILRDEHVFRILKHWLKVGEP 424 (440)
T ss_pred eEEEeCCCCEEecchhhccC--ccccccccCC-chHHHHhcCHHHHHHHHHHHhcCCC
Confidence 55667778888776655331 2334445566 7999998877899999999976543
No 342
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=25.22 E-value=1.3e+02 Score=28.61 Aligned_cols=77 Identities=12% Similarity=0.057 Sum_probs=46.2
Q ss_pred CCeEEEEEcCCCCC----------CcccccchHHHHHhcCeEEEEECCCC---CCCCCCCCc-------ccHHHHHHHHH
Q 037354 59 SNYRIVLVHGFGSS----------KEMNFPASQELIESLGIYFVLYDRAG---YGESDPNPR-------RTVKSEAFDIV 118 (346)
Q Consensus 59 ~~~~vl~lhG~~~~----------~~~~~~~~~~l~~~~g~~vi~~D~~G---~G~S~~~~~-------~~~~~~~~~l~ 118 (346)
++.+||+.|..... ...|+..+..|.++ ||++|.+|--= .|....+.. ....+....+.
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~n-GY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~Al 125 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDN-GYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVY 125 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHC-cCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHH
Confidence 35677777776533 23455666777766 99999987321 122211111 13445667788
Q ss_pred HHHHHcCCCCeEEEEEEc
Q 037354 119 ELADQLQLGSKFYVIGVS 136 (346)
Q Consensus 119 ~~l~~l~~~~~~~lvGhS 136 (346)
-+|++.+...-+.++|.-
T Consensus 126 PILKkyg~pATfFvVg~w 143 (672)
T PRK14581 126 PLLKAYKWSAVLAPVGTW 143 (672)
T ss_pred HHHHHcCCCEEEEEechh
Confidence 899999985456666643
No 343
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=25.13 E-value=81 Score=26.70 Aligned_cols=22 Identities=23% Similarity=0.415 Sum_probs=18.2
Q ss_pred CCCCeEEEEEEccChHHHHHhHh
Q 037354 125 QLGSKFYVIGVSIGSYPTWSCLK 147 (346)
Q Consensus 125 ~~~~~~~lvGhS~Gg~~a~~~a~ 147 (346)
+. ++.++.|||+|=+.|+..+.
T Consensus 83 ~~-~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GV-KPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CC-CCceeecccHhHHHHHHHcc
Confidence 35 68899999999998887765
No 344
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=24.55 E-value=1.4e+02 Score=24.85 Aligned_cols=49 Identities=20% Similarity=0.324 Sum_probs=28.0
Q ss_pred cHHHHHH-HHHHHHHHcCC--CCeEEEEEEccChHHHHHhHhhccCceeeeEE
Q 037354 109 TVKSEAF-DIVELADQLQL--GSKFYVIGVSIGSYPTWSCLKYIPHRLAGVAL 158 (346)
Q Consensus 109 ~~~~~~~-~l~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil 158 (346)
++++-.. -+..+++.+++ +.++.=+|..+||. +..+|.++.-+|.++.+
T Consensus 42 ~Le~AQ~~k~~~~~~~~~l~~G~~vLDiGcGwG~~-~~~~a~~~g~~v~gitl 93 (273)
T PF02353_consen 42 TLEEAQERKLDLLCEKLGLKPGDRVLDIGCGWGGL-AIYAAERYGCHVTGITL 93 (273)
T ss_dssp -HHHHHHHHHHHHHTTTT--TT-EEEEES-TTSHH-HHHHHHHH--EEEEEES
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCEEEEeCCCccHH-HHHHHHHcCcEEEEEEC
Confidence 4444333 45566677654 46788999998876 55577776556666554
No 345
>PRK00131 aroK shikimate kinase; Reviewed
Probab=24.20 E-value=71 Score=23.83 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=25.3
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECC
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDR 96 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 96 (346)
.+.+|++.|.++++.. .++..|++..|+.++-.|.
T Consensus 3 ~~~~i~l~G~~GsGKs--tla~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 3 KGPNIVLIGFMGAGKS--TIGRLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCCeEEEEcCCCCCHH--HHHHHHHHHhCCCEEEChH
Confidence 3568899998888866 4567788877876665553
No 346
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=23.79 E-value=1.7e+02 Score=27.07 Aligned_cols=37 Identities=16% Similarity=0.271 Sum_probs=26.7
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCC
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRA 97 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 97 (346)
..|.||++.|.++++.+- ++..++...||.++..|..
T Consensus 367 ~~p~LVil~G~pGSGKST--~A~~l~~~~g~~~vn~D~l 403 (526)
T TIGR01663 367 APCEMVIAVGFPGAGKSH--FCKKFFQPAGYKHVNADTL 403 (526)
T ss_pred CCceEEEEECCCCCCHHH--HHHHHHHHcCCeEECcHHH
Confidence 467899999999887653 3455666668888877754
No 347
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=23.65 E-value=99 Score=21.56 Aligned_cols=35 Identities=23% Similarity=0.354 Sum_probs=25.7
Q ss_pred EEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCC
Q 037354 64 VLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYG 100 (346)
Q Consensus 64 l~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G 100 (346)
|++||-.+++... ++..+++..++.++.+|..-..
T Consensus 1 ill~G~~G~GKT~--l~~~la~~l~~~~~~i~~~~~~ 35 (132)
T PF00004_consen 1 ILLHGPPGTGKTT--LARALAQYLGFPFIEIDGSELI 35 (132)
T ss_dssp EEEESSTTSSHHH--HHHHHHHHTTSEEEEEETTHHH
T ss_pred CEEECcCCCCeeH--HHHHHHhhcccccccccccccc
Confidence 6889988888764 4667777778888888875443
No 348
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=23.54 E-value=67 Score=28.68 Aligned_cols=38 Identities=13% Similarity=-0.032 Sum_probs=24.3
Q ss_pred EEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceee
Q 037354 280 VHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILH 320 (346)
Q Consensus 280 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 320 (346)
|+++.|+.|+......... .-.....++|+|++|+.-+
T Consensus 379 viFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 379 VIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp EEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGG
T ss_pred EEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeeccc
Confidence 9999999999987653221 2234567889999998765
No 349
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=23.39 E-value=3.1e+02 Score=20.18 Aligned_cols=48 Identities=6% Similarity=-0.006 Sum_probs=32.8
Q ss_pred HHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccCceeeeEEecccCC
Q 037354 116 DIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTIN 164 (346)
Q Consensus 116 ~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 164 (346)
++.++++..++ +.++++|-+....+...+...+-.-++-.|+.+....
T Consensus 89 ~l~~~L~~~gi-~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~s 136 (155)
T cd01014 89 DLEEWLREAGI-DHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACAT 136 (155)
T ss_pred CHHHHHHHCCC-CEEEEEeeccchhHHHHHHHHHHCCCcEEEecccccC
Confidence 67788888999 7999999999766654443333334566666666544
No 350
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=23.37 E-value=43 Score=26.70 Aligned_cols=34 Identities=26% Similarity=0.271 Sum_probs=22.7
Q ss_pred eEEEEEcCC-CCCCcccccchHHHHHhcCeEEEEEC
Q 037354 61 YRIVLVHGF-GSSKEMNFPASQELIESLGIYFVLYD 95 (346)
Q Consensus 61 ~~vl~lhG~-~~~~~~~~~~~~~l~~~~g~~vi~~D 95 (346)
..||++|.. ..+......++..|.++ ||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~-Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQ-GYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHC-CCEEEEhH
Confidence 368888864 33444555677777766 89888764
No 351
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.88 E-value=1.1e+02 Score=25.04 Aligned_cols=21 Identities=14% Similarity=0.123 Sum_probs=17.7
Q ss_pred EEEEEEccChHHHHHhHhhcc
Q 037354 130 FYVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 130 ~~lvGhS~Gg~~a~~~a~~~p 150 (346)
-.+.|-|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 468899999999999887654
No 352
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.76 E-value=1.6e+02 Score=20.69 Aligned_cols=31 Identities=10% Similarity=-0.049 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEEccChHHHH
Q 037354 112 SEAFDIVELADQLQLGSKFYVIGVSIGSYPTW 143 (346)
Q Consensus 112 ~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~ 143 (346)
+....+.-.+..++. +.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v-~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGV-KHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCC-CEEEEEccCCCcHHHH
Confidence 455667777888999 7999999977555443
No 353
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]
Probab=22.63 E-value=4.6e+02 Score=22.21 Aligned_cols=44 Identities=14% Similarity=0.180 Sum_probs=30.9
Q ss_pred eEEEEEcCCCCCCcccccc--hHHHHHhcCeEEEEECCC-CCCCCCC
Q 037354 61 YRIVLVHGFGSSKEMNFPA--SQELIESLGIYFVLYDRA-GYGESDP 104 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~~--~~~l~~~~g~~vi~~D~~-G~G~S~~ 104 (346)
+-+-++||...+...+..+ +.++..+++=.||..|.| ++|.++.
T Consensus 96 ~~~~i~HGl~~~~~v~~vL~ev~~Fl~~h~eEVViL~f~~~fg~~~~ 142 (306)
T KOG4306|consen 96 REFYICHGLFSTYPVLEVLNEVRQFLSEHPEEVVILEFRHFFGMTEP 142 (306)
T ss_pred cceEEEeeccccccHHHHHHHHHHHHHhCCCEEEEEeccchhccCcc
Confidence 3499999999988777633 344444556678889998 6676654
No 354
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=22.54 E-value=1.3e+02 Score=24.49 Aligned_cols=43 Identities=7% Similarity=0.026 Sum_probs=32.9
Q ss_pred eEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCC
Q 037354 61 YRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESD 103 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~ 103 (346)
..++|.-|-..-+..+.+++..+++++|+.|+.+..-|.|...
T Consensus 146 GL~fFy~s~Cp~C~~~aPil~~fa~~yg~~v~~VS~DG~~~p~ 188 (248)
T PRK13703 146 GLMFFYRGQDPIDGQLAQVINDFRDTYGLSVIPVSVDGVINPL 188 (248)
T ss_pred eEEEEECCCCchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCC
Confidence 3555555555666778899999999999999998888877554
No 355
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=21.92 E-value=2.2e+02 Score=25.17 Aligned_cols=39 Identities=8% Similarity=-0.050 Sum_probs=26.5
Q ss_pred CeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCC
Q 037354 88 GIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQL 126 (346)
Q Consensus 88 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~ 126 (346)
.|.||.+|.|.+++|......-.+++.+-+...++-+..
T Consensus 290 ~fDlIilDPPsF~r~k~~~~~~~rdy~~l~~~~~~iL~p 328 (393)
T COG1092 290 KFDLIILDPPSFARSKKQEFSAQRDYKDLNDLALRLLAP 328 (393)
T ss_pred cccEEEECCcccccCcccchhHHHHHHHHHHHHHHHcCC
Confidence 488999999999999865422344555555555556655
No 356
>PLN03006 carbonate dehydratase
Probab=21.74 E-value=1.7e+02 Score=24.57 Aligned_cols=29 Identities=17% Similarity=0.074 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEEccChHHH
Q 037354 113 EAFDIVELADQLQLGSKFYVIGVSIGSYPT 142 (346)
Q Consensus 113 ~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a 142 (346)
...-|+-.+.+|+. +.|+++|||-=|.+.
T Consensus 158 ~~aSLEYAV~~L~V-~~IVV~GHs~CGaV~ 186 (301)
T PLN03006 158 TKAALEFSVNTLNV-ENILVIGHSRCGGIQ 186 (301)
T ss_pred hhhhHHHHHHHhCC-CEEEEecCCCchHHH
Confidence 45677888899999 799999999855444
No 357
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=21.68 E-value=5e+02 Score=23.37 Aligned_cols=63 Identities=11% Similarity=0.109 Sum_probs=41.0
Q ss_pred CeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHHHhHhhccC--ceeeeEE
Q 037354 88 GIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTWSCLKYIPH--RLAGVAL 158 (346)
Q Consensus 88 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lil 158 (346)
+|.++.+|-+|.-.. -+.+.+.+..+.+.... ..+++|--++-|.-+...+..+-+ .+.++|+
T Consensus 182 ~~DvViIDTaGr~~~-------d~~lm~El~~i~~~~~p-~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 182 NFDIIIVDTSGRHKQ-------EDSLFEEMLQVAEAIQP-DNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred CCCEEEEECCCCCcc-------hHHHHHHHHHHhhhcCC-cEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 688999999874322 23445556666666666 577888878777666666655433 4677776
No 358
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=21.58 E-value=1e+02 Score=25.00 Aligned_cols=20 Identities=25% Similarity=0.373 Sum_probs=17.1
Q ss_pred EEEEEccChHHHHHhHhhcc
Q 037354 131 YVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 131 ~lvGhS~Gg~~a~~~a~~~p 150 (346)
.+.|-|+|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 39999999999999887644
No 359
>PRK08118 topology modulation protein; Reviewed
Probab=21.55 E-value=3.6e+02 Score=20.25 Aligned_cols=85 Identities=14% Similarity=0.085 Sum_probs=47.1
Q ss_pred EEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccChHHHH
Q 037354 64 VLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIGSYPTW 143 (346)
Q Consensus 64 l~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~~a~ 143 (346)
|++.|.++++.+ .++..|++..++.++.+|..-.... . ...+-++..+.+.++++ - +.+++=|+ +++.+..
T Consensus 4 I~I~G~~GsGKS--Tlak~L~~~l~~~~~~lD~l~~~~~-w-~~~~~~~~~~~~~~~~~---~-~~wVidG~-~~~~~~~ 74 (167)
T PRK08118 4 IILIGSGGSGKS--TLARQLGEKLNIPVHHLDALFWKPN-W-EGVPKEEQITVQNELVK---E-DEWIIDGN-YGGTMDI 74 (167)
T ss_pred EEEECCCCCCHH--HHHHHHHHHhCCCceecchhhcccC-C-cCCCHHHHHHHHHHHhc---C-CCEEEeCC-cchHHHH
Confidence 677788887766 4678888888888888885432211 0 01122233333333332 2 35666665 5554432
Q ss_pred HhHhhccCceeeeEEeccc
Q 037354 144 SCLKYIPHRLAGVALIVPT 162 (346)
Q Consensus 144 ~~a~~~p~~v~~lil~~~~ 162 (346)
.+ +..+.+|.++.+
T Consensus 75 ~l-----~~~d~vi~Ld~p 88 (167)
T PRK08118 75 RL-----NAADTIIFLDIP 88 (167)
T ss_pred HH-----HhCCEEEEEeCC
Confidence 22 136677888764
No 360
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.34 E-value=1.5e+02 Score=21.64 Aligned_cols=27 Identities=15% Similarity=-0.022 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEEccCh
Q 037354 112 SEAFDIVELADQLQLGSKFYVIGVSIGS 139 (346)
Q Consensus 112 ~~~~~l~~~l~~l~~~~~~~lvGhS~Gg 139 (346)
+....+.-.+..++. +.++++||+-=|
T Consensus 41 ~~~~sl~~av~~l~~-~~IiV~gHt~Cg 67 (142)
T cd03379 41 DAIRSLVVSVYLLGT-REIIVIHHTDCG 67 (142)
T ss_pred hHHHHHHHHHHHhCC-CEEEEEeecCCc
Confidence 455667777888998 799999998533
No 361
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=21.22 E-value=2.3e+02 Score=17.83 Aligned_cols=32 Identities=22% Similarity=0.225 Sum_probs=19.4
Q ss_pred eEEEEEEccChHHHHHhHhhccCceeeeEEecccC
Q 037354 129 KFYVIGVSIGSYPTWSCLKYIPHRLAGVALIVPTI 163 (346)
Q Consensus 129 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 163 (346)
+++++| ||.+++++|......=..+.++....
T Consensus 1 ~vvViG---gG~ig~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIG---GGFIGIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp EEEEES---SSHHHHHHHHHHHHTTSEEEEEESSS
T ss_pred CEEEEC---cCHHHHHHHHHHHHhCcEEEEEeccc
Confidence 356666 66677776665544445666666653
No 362
>TIGR02739 TraF type-F conjugative transfer system pilin assembly protein TraF. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold and has been shown to be localized to the periplasm. Unlike the related protein TrbB (TIGR02738), TraF does not contain a conserved pair of cysteines and has been shown not to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. Even more closely related than TrbB is a clade of genes (TIGR02740) which do contain the CXXC motif, but it is unclear whether these genes are involved in type-F conjugation systems per se.
Probab=20.92 E-value=2.2e+02 Score=23.42 Aligned_cols=43 Identities=14% Similarity=0.087 Sum_probs=32.9
Q ss_pred eEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCC
Q 037354 61 YRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESD 103 (346)
Q Consensus 61 ~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~ 103 (346)
..++|.-|-..-+..+.+++..+++++|+.|+.++.-|.|...
T Consensus 153 gL~fFy~~~C~~C~~~apil~~fa~~ygi~v~~VS~DG~~~p~ 195 (256)
T TIGR02739 153 GLFFFYRGKSPISQKMAPVIQAFAKEYGISVIPISVDGTLIPG 195 (256)
T ss_pred eEEEEECCCCchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCC
Confidence 3555666555556677788899999999999999988887654
No 363
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=20.85 E-value=2.8e+02 Score=21.85 Aligned_cols=56 Identities=11% Similarity=0.021 Sum_probs=39.7
Q ss_pred CcEEEEecCCCCCCchhHHHHHHHhcCCceEEEecCCCcceeec-cchhHHHHHHHhh
Q 037354 278 SSVHIWQGYEDKVVPFQLQRFISRKLSWIKYHEVRDGGHLILHY-NGMCDYFLRALLV 334 (346)
Q Consensus 278 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~ 334 (346)
.|++++.|..+...+.+..+.+.+.+.+--+++++.. ++.-.. .+.+.+.+...+-
T Consensus 54 yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~-~~~~~~~~~~~r~~~~~v~p 110 (207)
T PF13709_consen 54 YPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDR-DCGSAGFDASFRRLMKRVFP 110 (207)
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECC-CcccccccHHHHHHHHHhcC
Confidence 3499999999998888888999998877778888765 322222 3445555555554
No 364
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=20.59 E-value=4e+02 Score=20.84 Aligned_cols=17 Identities=18% Similarity=0.067 Sum_probs=14.7
Q ss_pred eEEEEEEccChHHHHHh
Q 037354 129 KFYVIGVSIGSYPTWSC 145 (346)
Q Consensus 129 ~~~lvGhS~Gg~~a~~~ 145 (346)
..+++|.|.|+.+....
T Consensus 114 G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 114 GVVIGGTSAGAAVMGET 130 (210)
T ss_pred CCeEEEcCHHHHHhhhc
Confidence 56899999999988875
No 365
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.59 E-value=2.5e+02 Score=23.57 Aligned_cols=46 Identities=17% Similarity=0.255 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCC---CCeEEEEEEcc--ChHHHHHhHhhccCceeeeEEec
Q 037354 114 AFDIVELADQLQL---GSKFYVIGVSI--GSYPTWSCLKYIPHRLAGVALIV 160 (346)
Q Consensus 114 ~~~l~~~l~~l~~---~~~~~lvGhS~--Gg~~a~~~a~~~p~~v~~lil~~ 160 (346)
+..+.+++++.++ +++++++|.|. |=-+++.+..++++ +.+-|.++
T Consensus 137 p~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~-~~AtVtvc 187 (287)
T PRK14181 137 PAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPD-TNATVTLL 187 (287)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCC-CCCEEEEe
Confidence 4566777777763 47999999997 77777777766543 34445444
No 366
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=20.56 E-value=1.7e+02 Score=21.97 Aligned_cols=36 Identities=28% Similarity=0.349 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHcCC---CCeEEEEEEcc--ChHHHHHhHhh
Q 037354 113 EAFDIVELADQLQL---GSKFYVIGVSI--GSYPTWSCLKY 148 (346)
Q Consensus 113 ~~~~l~~~l~~l~~---~~~~~lvGhS~--Gg~~a~~~a~~ 148 (346)
-+..+.+++++.++ ++++.++|.|. |--+++.+..+
T Consensus 19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 19 TPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 45667777777653 47999999995 66666666654
No 367
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=20.56 E-value=1.2e+02 Score=24.74 Aligned_cols=21 Identities=24% Similarity=0.327 Sum_probs=17.9
Q ss_pred EEEEEEccChHHHHHhHhhcc
Q 037354 130 FYVIGVSIGSYPTWSCLKYIP 150 (346)
Q Consensus 130 ~~lvGhS~Gg~~a~~~a~~~p 150 (346)
-.++|-|.|+.++..++...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 468999999999999987654
No 368
>PLN02200 adenylate kinase family protein
Probab=20.52 E-value=1.7e+02 Score=23.62 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=24.4
Q ss_pred CCeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEE
Q 037354 59 SNYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLY 94 (346)
Q Consensus 59 ~~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~ 94 (346)
..|.+|++.|.++++.. .++..|++.+|+..+..
T Consensus 41 ~~~~ii~I~G~PGSGKs--T~a~~La~~~g~~his~ 74 (234)
T PLN02200 41 KTPFITFVLGGPGSGKG--TQCEKIVETFGFKHLSA 74 (234)
T ss_pred CCCEEEEEECCCCCCHH--HHHHHHHHHhCCeEEEc
Confidence 45789999999999876 34567777777655544
No 369
>PF03880 DbpA: DbpA RNA binding domain ; InterPro: IPR005580 This RNA binding domain is found at the C terminus of a number of DEAD helicase proteins [].; PDB: 2G0C_A 3MOJ_B.
Probab=20.45 E-value=1.8e+02 Score=18.23 Aligned_cols=57 Identities=12% Similarity=0.021 Sum_probs=32.6
Q ss_pred EEEEecCCCCCCchhHHHHHHHhc--CCceEEEecCCCcceeec-cchhHHHHHHHhhcc
Q 037354 280 VHIWQGYEDKVVPFQLQRFISRKL--SWIKYHEVRDGGHLILHY-NGMCDYFLRALLVGE 336 (346)
Q Consensus 280 vlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-~~~~~~~i~~fl~~~ 336 (346)
..+=.|..|.+.|......+.+.. +...+=-+.=-.++.+.+ |++.++.+.+-|++.
T Consensus 3 l~in~Gr~dg~~~~~iv~~i~~~~gi~~~~IG~I~I~~~~S~vev~~~~a~~v~~~l~~~ 62 (74)
T PF03880_consen 3 LFINVGRKDGLTPRDIVGAICNEAGIPGRDIGRIDIFDNFSFVEVPEEVAEKVLEALNGK 62 (74)
T ss_dssp EEES-SGGGT--HHHHHHHHHTCTTB-GGGEEEEEE-SS-EEEEE-TT-HHHHHHHHTT-
T ss_pred EEEEcccccCCCHHHHHHHHHhccCCCHHhEEEEEEeeeEEEEEECHHHHHHHHHHhcCC
Confidence 344478899999888888887764 443333333335677778 888888888877753
No 370
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=20.34 E-value=1.7e+02 Score=22.21 Aligned_cols=82 Identities=20% Similarity=0.248 Sum_probs=43.2
Q ss_pred CeEEEEEcCCCCCCcccccchHHHH-HhcCeEEEEECCCCCCCCCCCCcccHHHHHHHHHHHHHHcCCCCeEEEEEEccC
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELI-ESLGIYFVLYDRAGYGESDPNPRRTVKSEAFDIVELADQLQLGSKFYVIGVSIG 138 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~-~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~G 138 (346)
...++.+.|.......-...-..+. +-.|.++...- ||+.... ..-..+..+.+..+ ..+.+.||+
T Consensus 52 ~~~i~~V~GN~D~~~~~~~~p~~~~~~~~g~ki~l~H--Gh~~~~~-------~~~~~l~~la~~~~--~Dvli~GHT-- 118 (172)
T COG0622 52 AAKLIAVRGNCDGEVDQEELPEELVLEVGGVKIFLTH--GHLYFVK-------TDLSLLEYLAKELG--ADVLIFGHT-- 118 (172)
T ss_pred ccceEEEEccCCCccccccCChhHeEEECCEEEEEEC--CCccccc-------cCHHHHHHHHHhcC--CCEEEECCC--
Confidence 3578888888766532111111111 11145544432 4443211 11234444555555 489999998
Q ss_pred hHHHHHhHhhcc--CceeeeEEecccC
Q 037354 139 SYPTWSCLKYIP--HRLAGVALIVPTI 163 (346)
Q Consensus 139 g~~a~~~a~~~p--~~v~~lil~~~~~ 163 (346)
..| +++.++++++|..
T Consensus 119 ---------H~p~~~~~~~i~~vNPGS 136 (172)
T COG0622 119 ---------HKPVAEKVGGILLVNPGS 136 (172)
T ss_pred ---------CcccEEEECCEEEEcCCC
Confidence 223 4677899999974
No 371
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=20.31 E-value=1.3e+02 Score=17.27 Aligned_cols=26 Identities=12% Similarity=0.251 Sum_probs=21.7
Q ss_pred ccHHHHHHHHHHHHHHcCCCCeEEEEE
Q 037354 108 RTVKSEAFDIVELADQLQLGSKFYVIG 134 (346)
Q Consensus 108 ~~~~~~~~~l~~~l~~l~~~~~~~lvG 134 (346)
.+.+.|-.|+...|..+.+ ..+.++|
T Consensus 6 w~PqSWM~DLrS~I~~~~I-~ql~ipG 31 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAI-TQLFIPG 31 (51)
T ss_pred cCcHHHHHHHHHHHhccee-eeEEecc
Confidence 3678889999999999988 5788876
No 372
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=20.22 E-value=2.5e+02 Score=21.97 Aligned_cols=68 Identities=18% Similarity=0.193 Sum_probs=34.4
Q ss_pred CeEEEEEcCCCCCCcccccchHHHHHhcCeEEEEECCCCCCCCCCC-Ccc--cHHHHHHHHHHHHHHcCCCCeEE
Q 037354 60 NYRIVLVHGFGSSKEMNFPASQELIESLGIYFVLYDRAGYGESDPN-PRR--TVKSEAFDIVELADQLQLGSKFY 131 (346)
Q Consensus 60 ~~~vl~lhG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~--~~~~~~~~l~~~l~~l~~~~~~~ 131 (346)
+.+||+++.+......-...++.|.+..||.++-+ |...+-+. ... +++-+.+-+.+.++..++ +++.
T Consensus 121 ~~PvvlaPAMN~~M~~~~~ni~~L~~~~g~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 191 (196)
T PRK08305 121 QRPVVLAISTNDALGLNAKNLGRLLNTKNIYFVPF---GQDDPVKKPNSLVARMDLLIDTVEEALEGKQL-QPVL 191 (196)
T ss_pred CCCEEEEECCCHHHHhCHHHHHHHHhcCCEEEEec---CCCCCCCCchhHHhhHHhhHHHHHHHHhCCcc-ccee
Confidence 45777777655433211244555654447655522 22222222 222 566666666777766666 5554
Done!