BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037360
(642 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O54922|EXOC7_RAT Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1
Length = 653
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 125/637 (19%), Positives = 248/637 (38%), Gaps = 131/637 (20%)
Query: 66 VEKRLKCAERMVLRWQ--ANQSMIWDTGP-GEVSEFLGAIDEVQTLIDSFSGVSVN--EN 120
VEK L C + ++ + ++ I GP G + E+LG++ ++Q ++ F S + E
Sbjct: 77 VEKTLSCLDHVISYYHVASDTEKIIREGPTGRLEEYLGSMAKIQKAVEYFQDNSPDSPEL 136
Query: 121 GRVRELLYRANNIVQMAMLRLQEELIHILVHHKLYFEPEYVSFHSCRADVIYDESFVSLE 180
+V+ L R L+ E ++ H P V +S +
Sbjct: 137 NKVKLLFERGKE-------SLESEFRSLMTRHSKVISPVLVL------------DLISAD 177
Query: 181 DESVEASQRVSNTGSVSGEYIVDLIHPQVVPDLKAIANAMIAANYDQEFCAAFIGARQDA 240
DE V + +++ + V+ D+ I+ ++ +Q+F + R
Sbjct: 178 DEL-----------EVQEDVVLEHLPESVLQDVIRISRWLVEYGRNQDFMNVYYQIRSSQ 226
Query: 241 LNEYFFVILELEKFSIDDVLKMKWSTLSSEIKKWNWAMKIIIRVYLTSEKQLCNKILGRF 300
L+ + E + + +S +K K I R GR
Sbjct: 227 LDRSIKGLKEHFR-KSSSSSGVPYSPAIPNKRKDTPTKKPIKRP-------------GRD 272
Query: 301 DTV---------CSLCFVEIAKATFLCLLNFGEAVAMGSTQPEKLFCLLDMYEVLDDLLL 351
D + C FV +A++ + L+ + +K F L + + LD L+L
Sbjct: 273 DMLDVETDAYIHCVSAFVRLAQSEYQLLMGI-----IPEHHQKKTFDSL-IQDALDGLML 326
Query: 352 EIDSLLFEEAGSYIRIEFH------ELLRKLGHSARQAFQELQKAIAADSSMKP------ 399
E ++++ + IR +F +LR L + + Q LQ A+ + P
Sbjct: 327 EGENIVSAARKAIIRHDFSTVLTVFPILRHLKQTKPEFDQVLQGTAASTKNKLPGLITSM 386
Query: 400 ------------------------LPRGG-IHPLTRYVMNYIKTLTIYDDTLNLLFEDQN 434
+P+ G +H LT + +++ L + +T + Q
Sbjct: 387 ETIGAKALEDFADNIKNDPDKEYNMPKDGTVHELTSNAILFLQQLLDFQETAGAMLASQE 446
Query: 435 MEDTHSIVESETEQDISPITFCPLACHLRSITSALECSLVVKSRLYREDSLRHIFLMNNI 494
+ + SE + + L+ ++ + L+ +L+ KS++Y + +L IFL NN
Sbjct: 447 TSSSATSYNSEFSKRL-------LSTYICKVLGNLQLNLLSKSKVYEDPALSAIFLHNNY 499
Query: 495 HYVVQKIKGSDLRIFF------GDEWIRKHIGKFQQHATSYQRATWCSVLSFLRD----- 543
+Y+++ ++ S+L + R+HI +Q +YQR +W V ++ +
Sbjct: 500 NYILKSLEKSELIQLVAVTQKTAERSYREHI---EQQIQTYQR-SWLKVTDYIAEKNLPV 555
Query: 544 --DGHCSNSVLKTSYKERCREFTNAFEDVYKIQIQWCITDPQLKEDLRISTSLKVIHAYR 601
G + KER + F + E++ KIQ W I D + ++ +R + V Y
Sbjct: 556 FQPGVKLRDKERQMIKERFKGFNDGLEELCKIQKAWAIPDTEQRDKIRQAQKSIVKETYG 615
Query: 602 TFIGR------NRISDKHIKYTVDDLEKLLLDFFEGT 632
F+ R + +K+IKY V+ + ++ F+ +
Sbjct: 616 AFLHRYSSVPFTKNPEKYIKYRVEQVGDMIDRLFDTS 652
>sp|O35250|EXOC7_MOUSE Exocyst complex component 7 OS=Mus musculus GN=Exoc7 PE=1 SV=2
Length = 697
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 134/660 (20%), Positives = 263/660 (39%), Gaps = 133/660 (20%)
Query: 66 VEKRLKCAERMVLRWQ--ANQSMIWDTGP-GEVSEFLGAIDEVQTLIDSFSGVSVN--EN 120
VEK L C + ++ + ++ I GP G + E+LG++ ++Q ++ F S + E
Sbjct: 77 VEKTLSCLDHVISYYHVASDTEKIIREGPTGRLEEYLGSMAKIQKAVEYFQDNSPDSPEL 136
Query: 121 GRVRELLYRANNIVQMAMLRLQEELIHILVHHKLYFEPEYVSFHSCRADVIYDESFVSLE 180
+V+ L R L+ E ++ H P ++ D +S +
Sbjct: 137 NKVKLLFERGKE-------SLESEFRSLMTRHSKVVSPV----------LLLD--LISAD 177
Query: 181 DESVEASQRVSNTGSVSGEYIVDLIHPQVVPDLKAIANAMIAANYDQEFCAAFIGARQD- 239
DE V + +++ + V+ D+ I+ ++ +Q+F + R
Sbjct: 178 DEL-----------EVQEDVVLEHLPESVLRDVVRISRWLVEYGRNQDFMNVYYQIRSSQ 226
Query: 240 ------ALNEYFFVILELEKFSIDDVL--KMKWSTLSSEIKKWNWAMKI--IIRVY---- 285
L E+F + K K + IK+ K +++ Y
Sbjct: 227 LDRSIKGLKEHFRKSSSSSGVPYSPAIPNKRKDTPTKKPIKRPGTIRKAQNLLKQYSQHG 286
Query: 286 LTSEKQLCNKIL--GRFDTV---------CSLCFVEIAKATFLCLLNFGEAVAMGSTQPE 334
L +K N I GR D + C FV++A++ + L+ + +
Sbjct: 287 LDGKKGGSNLIPLEGRDDMLDVETDAYIHCVSAFVKLAQSEYRLLMEI-----IPEHHQK 341
Query: 335 KLFCLLDMYEVLDDLLLEIDSLLFEEAGSYIRIEFH------ELLRKLGHSARQAFQELQ 388
K F L + + LD L+LE ++++ + IR +F +LR L + + Q LQ
Sbjct: 342 KTFDSL-IQDALDGLMLEGENIVSAARKAIIRHDFSTVLTVFPILRHLKQTKPEFDQVLQ 400
Query: 389 KAIAADSSMKP------------------------------LPRGG-IHPLTRYVMNYIK 417
A+ + P +P+ G +H LT + +++
Sbjct: 401 GTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPDKEYNMPKDGTVHELTSNAILFLQ 460
Query: 418 TLTIYDDTLNLLFEDQNMEDTHSIV----ESETEQDISPITFCP--LACHLRSITSALEC 471
L + +T + Q + DT++I E+ + F L+ ++ + L+
Sbjct: 461 QLLDFQETAGAMLASQVLGDTYNIPLDPRETSSSATSYSSEFSKRLLSTYICKVLGNLQL 520
Query: 472 SLVVKSRLYREDSLRHIFLMNNIHYVVQKIKGSDLRIFF------GDEWIRKHIGKFQQH 525
+L+ KS++Y + +L IFL NN +Y+++ ++ S+L + R+HI +Q
Sbjct: 521 NLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQKTAERSYREHI---EQQ 577
Query: 526 ATSYQRATWCSVLSFLRD-------DGHCSNSVLKTSYKERCREFTNAFEDVYKIQIQWC 578
+YQR +W V ++ + G + KER + F + E++ KIQ W
Sbjct: 578 IQTYQR-SWLKVTDYIAEKNLPVFQPGVKLRDKERQMIKERFKGFNDGLEELCKIQKVWA 636
Query: 579 ITDPQLKEDLRISTSLKVIHAYRTFIGR------NRISDKHIKYTVDDLEKLLLDFFEGT 632
I D + ++ +R + V Y F+ R + +K+IKY V+ + ++ F+ +
Sbjct: 637 IPDTEQRDKIRQAQKDIVKETYGAFLHRYGSVPFTKNPEKYIKYRVEQVGDMIDRLFDTS 696
>sp|Q9UPT5|EXOC7_HUMAN Exocyst complex component 7 OS=Homo sapiens GN=EXOC7 PE=1 SV=3
Length = 735
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 162/383 (42%), Gaps = 73/383 (19%)
Query: 304 CSLCFVEIAKATFLCLLNFGEAVAMGSTQPEKLFCLLDMYEVLDDLLLEIDSLLFEEAGS 363
C FV++A++ + L + + +K F L + + LD L+LE ++++ +
Sbjct: 367 CVSAFVKLAQSEYQLLADI-----IPEHHQKKTFDSL-IQDALDGLMLEGENIVSAARKA 420
Query: 364 YIRIEFH------ELLRKLGHSARQAFQELQKAIAADSSMKP------------------ 399
+R +F +LR L + + Q LQ A+ + P
Sbjct: 421 IVRHDFSTVLTVFPILRHLKQTKPEFDQVLQGTAASTKNKLPGLITSMETIGAKALEDFA 480
Query: 400 ------------LPRGG-IHPLTRYVMNYIKTLTIYDDTLNLLFEDQNMEDTHSIVESET 446
+P+ G +H LT + +++ L + +T + Q + + SE
Sbjct: 481 DNIKNDPDKEYNMPKDGTVHELTSNAILFLQQLLDFQETAGAMLASQETSSSATSYSSEF 540
Query: 447 EQDISPITFCPLACHLRSITSALECSLVVKSRLYREDSLRHIFLMNNIHYVVQKIKGSDL 506
+ + L+ ++ + L+ +L+ KS++Y + +L IFL NN +Y+++ ++ S+L
Sbjct: 541 SKRL-------LSTYICKVLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSEL 593
Query: 507 RIFF------GDEWIRKHIGKFQQHATSYQRATWCSVLSFLRD-------DGHCSNSVLK 553
+ R+HI +Q +YQR +W V ++ + G +
Sbjct: 594 IQLVAVTQKTAERSYREHI---EQQIQTYQR-SWLKVTDYIAEKNLPVFQPGVKLRDKER 649
Query: 554 TSYKERCREFTNAFEDVYKIQIQWCITDPQLKEDLRISTSLKVIHAYRTFIGR------N 607
KER + F + E++ KIQ W I D + ++ +R + V Y F+ +
Sbjct: 650 QIIKERFKGFNDGLEELCKIQKAWAIPDTEQRDRIRQAQKTIVKETYGAFLQKFGSVPFT 709
Query: 608 RISDKHIKYTVDDLEKLLLDFFE 630
+ +K+IKY V+ + ++ F+
Sbjct: 710 KNPEKYIKYGVEQVGDMIDRLFD 732
>sp|Q9VSJ8|EXOC7_DROME Exocyst complex component 7 OS=Drosophila melanogaster GN=exo70
PE=1 SV=2
Length = 693
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 24/290 (8%)
Query: 366 RIEFHELLRKLGHSARQAFQELQKAIAADSS-----MKPLPRGG-IHPLTRYVMNYIKTL 419
R + ++L+KL H+ +A + + +SS +P+ +H LT + +I+ L
Sbjct: 404 REQLKKVLKKLQHTGAKALEHFLDVVKGESSTNIVGQSNVPKDATVHELTSNTIWFIEHL 463
Query: 420 TIYDDTL-NLLFEDQNMEDTHSIVESETEQDISPITFCPLACHLRSITSALECSLVVKSR 478
+ D + ++L +D + + + LA +++ + L S++ K
Sbjct: 464 YDHFDVIGSILAQDVLYSTQLDTILMKKALPVEERNKALLAIYIKKALAELNLSIMNKCE 523
Query: 479 LYREDSLRHIFLMNNIHYVVQKIKGS---DLRIFFGDEWIRKHIGKFQQHATSYQRATWC 535
Y + + +H+F +NNIHY+++ ++ S DL E ++ ++ SYQ+ TW
Sbjct: 524 QYNDQATKHLFRLNNIHYILKSLQRSNLIDLVTLAEPECEHSYMEMIRELKASYQK-TWS 582
Query: 536 SVLSFLRDDGHCSNSVL-------KTSYKERCREFTNAFEDVYKIQIQWCITDPQLKEDL 588
+L + V ++ KER F FE+ KIQ I D L+E +
Sbjct: 583 KMLVGIYSLDELPKPVAGKVKDKDRSVLKERFSNFNKDFEEACKIQRGISIPDVILREGI 642
Query: 589 RISTSLKVIHAYRTF------IGRNRISDKHIKYTVDDLEKLLLDFFEGT 632
+ ++ Y F + ++ DK++KY ++ +L F+ +
Sbjct: 643 KRDNVEHILPIYNRFYEIYSGVHFSKNPDKYVKYRQHEINAMLSKLFDDS 692
>sp|P19658|EXO70_YEAST Exocyst complex component EXO70 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=EXO70 PE=1 SV=1
Length = 623
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 489 FLMNNIHYVVQKIKGSDLRIFFGDEWIRKHIGKFQQHATSYQRATWCSVLSFLRD----D 544
F++ N+ V Q ++ S+L + E + + ++ SY + W + + L D D
Sbjct: 475 FILMNLTLVEQIVEKSELNLMLAGEG-HSRLERLKKRYISYMVSDWRDLTANLMDSVFID 533
Query: 545 GHCSNSVLKTSYKERCREFTNAFEDVYKIQIQWCITDPQLKEDLRISTSLKVIHAYRTFI 604
S K KE+ R+F FED+ Q+ ++DP LK L+ V+ Y F
Sbjct: 534 SSGKKSKDKEQIKEKFRKFNEGFEDLVSKTKQYKLSDPSLKVTLKSEIISLVMPMYERFY 593
Query: 605 GRNRIS----DKHIKYTVDDLEKLL 625
R + S KHIKYT D+L +L
Sbjct: 594 SRYKDSFKNPRKHIKYTPDELTTVL 618
>sp|Q6FJW2|EXO70_CANGA Exocyst complex protein EXO70 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=EXO70
PE=3 SV=1
Length = 623
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 489 FLMNNIHYVVQKIKGSDLRIFFGDEWIRKHIGKFQQHATSYQRATWCSVLSFLRD----D 544
++ N+ V Q ++ S+L + G+ + I K ++ +Y A W + L D D
Sbjct: 475 LVLMNMTLVEQIVEKSELSVMLGN-LGKARIEKLKKRYVNYLVADWKDLTVNLMDTVVID 533
Query: 545 GHCSNSVLKTSYKERCREFTNAFEDVYKIQIQWCITDPQLKEDLRISTSLKVIHAYRTFI 604
S K KE+ R F FED+ Q+ ++DP LK L+ ++ Y F
Sbjct: 534 SVGKKSKDKEQIKEKFRRFNEGFEDLISRTKQYKLSDPALKRLLKSEIVALLMPMYDRFY 593
Query: 605 GRNRIS----DKHIKYTVDDLEKLL 625
GR + S KHIKYT DD+ ++
Sbjct: 594 GRYKDSFKNPRKHIKYTPDDITNVI 618
>sp|Q4X0X6|EXO70_ASPFU Exocyst complex protein exo70 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=exo70
PE=3 SV=1
Length = 628
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 110/524 (20%), Positives = 196/524 (37%), Gaps = 86/524 (16%)
Query: 52 MTGNTINNGGEAIEVEKRLKCAERMVLRWQANQSMIWDTGPG--EVSEFLGAIDEVQTLI 109
+T + I+ EAIE RL R L + + I GP E+S++L A+ V +
Sbjct: 63 ITNSNIDKVNEAIE---RL----RQPLDAKNREEGIIRAGPQSVELSQYLAAMKRVDKAL 115
Query: 110 DSFSGVSVNENGRVRELLYRANNIVQMAMLRLQEELIHILVHHKLYFEPEY-----VSFH 164
S ++ N ++ + NN++ +LQ+ L IL + EP + + F
Sbjct: 116 VDLSSTNLKSN---QKAISEFNNLLSTGNAKLQDMLRGILNQYASPIEPLHYLTKDLPFP 172
Query: 165 SCRADVIYDESFV--SLEDESVEASQRVSNT-------GSVSGEYIVDLIHPQVVPDLKA 215
S + I + + + +++ + QR V G Y+ + + L
Sbjct: 173 SIPQETISELTSICAAIDSAASHGPQRGDGGNPALKIYADVRGAYLTSSLQNLAIASLNT 232
Query: 216 IANAMIAANYDQEFCAAFIGARQDALNEYFFVILEL--EKFSIDDVLKMKWSTLSSEIKK 273
+ Y Q IG +AL + E+ + F+ D +T S + +
Sbjct: 233 VKRRAADGPYKQGTNG--IGIYSNALENFISTEYEIIAQIFTGDQRGLALQTTFRSALAE 290
Query: 274 WNWAMKIIIRVYLTSEKQLCNKILGRFDTVCSLCFVEIAKATFLCLLNFGEAVAMGSTQP 333
++ ++ +L I T C L F
Sbjct: 291 YSKTLR-----------ELNEYIKANLMTDCFLAF------------------------- 314
Query: 334 EKLFCLLDMYEVLDDLLLEIDSLLFEEAGSYIRIEFHELLRKLGHSARQAFQELQKAIAA 393
++ E++ + +DS E ++ F E LR + +A+ + EL +
Sbjct: 315 -------EIIEIVTAMSYRVDSRTGE-----LKSLFIEALRPVRETAKSSLSELLEETKR 362
Query: 394 DSSMKPL--PRGGIHPLTRYVMNYIKTLTIYDDTLNLLFE---DQNMEDTHSIVESETEQ 448
++ P+ P GG PL VM+ + TLT Y L + D N T +
Sbjct: 363 KAASIPVLPPDGGSVPLVNEVMSSLTTLTGYSGPLASILTSLGDGNWRSTAN-ASGTAPL 421
Query: 449 DISPITFCPLACHLRSITSALECSLVVKSR-LYREDSLRHIFLMNNIHYVVQKIKGS-DL 506
D+SP + L+ + + AL SL + R L+R +++ +FL N V + I+ S +L
Sbjct: 422 DVSPDSSALLSHFILDMIEALMSSLEARGRALHRSKAVQGVFLSNVFCIVDRAIRQSPEL 481
Query: 507 RIFFGDEWIRKHIGKFQQHATSYQRATWCSVLSFLRDDGHCSNS 550
G I F++ ATS W +L D + S +
Sbjct: 482 ARHLGTPDSIARIDTFRKRATSTYLDAWKETSQYLLDVQYTSRA 525
>sp|Q6CK11|EXO70_KLULA Exocyst complex protein EXO70 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=EXO70 PE=3 SV=1
Length = 619
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 489 FLMNNIHYVVQKIKGSDLRIFFGDEWIRKHIGKFQQHATSYQRATWCSVLSFLRD----- 543
FL+NN+ + Q ++ S++ G + + + ++ +Y + W + S L D
Sbjct: 470 FLLNNLSLIDQIVQRSEINSILGSAGLAR-LESLRKKYINYYVSDWRDLTSILLDQIFVD 528
Query: 544 -DGHCSNSVLKTSYKERCREFTNAFEDVYKIQIQWCITDPQLKEDLRISTSLKVIHAYRT 602
G S S K KE+ ++F + FED+ + I+DP LK+ LR V+ Y
Sbjct: 529 SSGKVS-SKEKDQIKEKFKKFHDGFEDLVSRSKSYRISDPALKKILRQEILSLVLPMYER 587
Query: 603 FIGRNRIS----DKHIKYTVDDLEKLL 625
F R + S KHIKYT +L +L
Sbjct: 588 FYNRYKDSFKHPRKHIKYTPSELMNVL 614
>sp|Q754H0|EXO70_ASHGO Exocyst complex protein EXO70 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=EXO70 PE=3
SV=1
Length = 614
Score = 39.7 bits (91), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 489 FLMNNIHYVVQKIKGSDLRIFFGDEWIRKHIGKFQQHATSYQRATWCSVLS------FLR 542
F++ NI + Q ++ S++ D + + K +Y + W + S F+
Sbjct: 465 FVLTNITLIEQIVQRSEINTVLEDIGAARLV-KLNARYVNYFASDWRDLASNLLDQVFVD 523
Query: 543 DDGHCSNSVLKTSYKERCREFTNAFEDVYKIQIQWCITDPQLKEDLRISTSLKVIHAYRT 602
G S S K KE+ R+F FE + ITDP +K+ L+ V Y
Sbjct: 524 SSGKIS-SKDKDQVKEKFRKFNEGFEQLVSNYKTCRITDPAMKKLLKQEIFALVAPMYER 582
Query: 603 FIGRNRIS----DKHIKYTVDDLEKLL 625
F R + S KHIKYT ++L +L
Sbjct: 583 FHNRYKDSFKNPRKHIKYTPNELMNIL 609
>sp|Q9PQ74|DPO3A_UREPA DNA polymerase III subunit alpha OS=Ureaplasma parvum serovar 3
(strain ATCC 700970) GN=dnaE PE=3 SV=1
Length = 969
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 17/84 (20%)
Query: 368 EFHELLRKLGHSARQAFQELQKAIAADS---SMKPLPRG-GIHPLTRYVMNYI------- 416
E E+ +KL ++ RQ I +DS ++ P+ G PL++Y M Y+
Sbjct: 421 ELFEISKKLINAPRQIGTHAAGIILSDSLISNIIPIQLGINDRPLSQYSMEYLERFGLIK 480
Query: 417 ------KTLTIYDDTLNLLFEDQN 434
K LTI D+ L +++E+QN
Sbjct: 481 MDLLGLKNLTIIDNVLKMIYENQN 504
>sp|Q1LSS2|RSMA_BAUCH Ribosomal RNA small subunit methyltransferase A OS=Baumannia
cicadellinicola subsp. Homalodisca coagulata GN=rsmA
PE=3 SV=1
Length = 271
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 29/144 (20%)
Query: 377 GHSARQAF-------QELQKAIAADSSMKPLPR-------GGIHPLTRYVMNYIKTLTIY 422
GH R+ Q + ++I A + PLP G+ LT+YV Y+KT+T+
Sbjct: 8 GHLVRKCLGQHFLHDQNIIESIVA--VIHPLPSQALVEIGPGLGALTKYVAKYVKTITVI 65
Query: 423 DDTLNLLFEDQNMEDTHSIVESE---TEQDISPITFCPLACHLRS---ITSALECSLVVK 476
+ NL+ N H I++ + QD+ + F LA L I L ++ +
Sbjct: 66 ELDHNLVAYLAN----HPILQHKLNILSQDVMKVNFSDLAKKLSQPLRIFGNLPYNISIA 121
Query: 477 SRLYREDSLRHIFLMNNIHYVVQK 500
+ RHI ++ ++H+++QK
Sbjct: 122 LMF---NLFRHIHMIRDMHFMLQK 142
>sp|P93527|PHYB_SORBI Phytochrome B OS=Sorghum bicolor GN=PHYB PE=3 SV=2
Length = 1178
Score = 32.7 bits (73), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 383 AFQELQKAIAADSSMKPLPRGGIHPLTRYVMNYIKTLTIYDDTLNLLFEDQNMEDTHSIV 442
A Q + A+ A S ++ LP G I L V+ +++ LT YD + F ED H V
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFH----EDEHGEV 301
Query: 443 ESETEQD 449
+E+ +D
Sbjct: 302 VAESRRD 308
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,593,973
Number of Sequences: 539616
Number of extensions: 9582777
Number of successful extensions: 23934
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 23914
Number of HSP's gapped (non-prelim): 22
length of query: 642
length of database: 191,569,459
effective HSP length: 124
effective length of query: 518
effective length of database: 124,657,075
effective search space: 64572364850
effective search space used: 64572364850
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)