Query 037360
Match_columns 642
No_of_seqs 240 out of 497
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 11:28:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037360.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037360hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2344 Exocyst component prot 100.0 6E-114 1E-118 966.4 57.8 600 14-637 6-620 (623)
2 PF03081 Exo70: Exo70 exocyst 100.0 1.8E-78 3.9E-83 655.5 27.1 358 271-628 1-371 (371)
3 PF06419 COG6: Conserved oligo 99.3 5.9E-08 1.3E-12 111.6 44.6 513 15-625 34-618 (618)
4 PF04129 Vps52: Vps52 / Sac2 f 98.6 0.00039 8.5E-09 78.6 36.7 423 19-529 14-507 (508)
5 KOG1961 Vacuolar sorting prote 98.4 0.0075 1.6E-07 66.7 38.4 129 26-155 82-221 (683)
6 KOG3758 Uncharacterized conser 98.3 0.014 3E-07 65.0 43.3 366 208-625 222-651 (655)
7 PF09763 Sec3_C: Exocyst compl 97.9 0.066 1.4E-06 63.3 36.6 215 368-605 438-693 (701)
8 PF04136 Sec34: Sec34-like fam 93.6 0.37 7.9E-06 45.9 8.7 91 62-154 57-151 (157)
9 PF10191 COG7: Golgi complex c 91.6 37 0.00081 40.7 32.0 202 210-431 200-446 (766)
10 KOG2148 Exocyst protein Sec3 [ 90.7 36 0.00079 39.1 36.3 226 369-624 605-859 (867)
11 PF07393 Sec10: Exocyst comple 88.4 62 0.0013 38.5 25.5 131 210-356 128-274 (710)
12 KOG1916 Nuclear protein, conta 63.2 60 0.0013 38.9 11.0 52 551-605 1012-1065(1283)
13 PRK10807 paraquat-inducible pr 54.9 30 0.00065 39.8 7.0 26 6-31 406-432 (547)
14 KOG0994 Extracellular matrix g 45.8 85 0.0018 38.6 8.7 47 94-143 1665-1711(1758)
15 COG2733 Predicted membrane pro 41.9 1.5E+02 0.0033 32.3 9.2 92 524-627 289-383 (415)
16 KOG3821 Heparin sulfate cell s 41.8 39 0.00084 38.2 5.0 67 550-630 94-168 (563)
17 PF10475 DUF2450: Protein of u 39.8 1.3E+02 0.0028 31.5 8.4 89 62-161 110-200 (291)
18 KOG2047 mRNA splicing factor [ 37.4 31 0.00067 39.8 3.4 70 559-629 83-180 (835)
19 TIGR02553 SipD_IpaD_SspD type 36.3 1.6E+02 0.0035 30.9 8.2 108 510-629 117-237 (308)
20 KOG3960 Myogenic helix-loop-he 32.6 76 0.0016 32.3 4.9 33 558-592 128-162 (284)
21 PRK10807 paraquat-inducible pr 30.7 2.2E+02 0.0048 32.8 9.1 112 32-164 416-533 (547)
22 PHA01746 hypothetical protein 27.6 21 0.00045 31.5 0.0 21 600-620 76-97 (131)
23 PF08855 DUF1825: Domain of un 26.3 2.7E+02 0.0058 24.8 6.7 55 553-608 7-61 (108)
24 KOG4344 Uncharacterized conser 23.7 2.3E+02 0.005 32.8 7.1 67 487-573 968-1038(1121)
No 1
>KOG2344 consensus Exocyst component protein and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.6e-114 Score=966.40 Aligned_cols=600 Identities=39% Similarity=0.607 Sum_probs=504.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcccccCCCCCCccchh-HHHHHHHHHHHHHhhhcCC-----ccc
Q 037360 14 DQHLIAAAHHILKLLGAIRNLSDDTRKLLADLDIHLSIMTGNTINNGGEAIE-VEKRLKCAERMVLRWQANQ-----SMI 87 (642)
Q Consensus 14 ~~~~~a~a~~i~~~L~~~~~lt~~~~~iL~~~d~~l~~~~~~~~p~~~~~~n-ie~~l~~~e~~i~~~d~~~-----~~i 87 (642)
.++.+....++...+...++.+.+ ..++++ +.+....+ ++.+++.++.++.+|+... ..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~s~~~~-----~~~~~~---------~~~s~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~~ 71 (623)
T KOG2344|consen 6 MEKRIFSLNSDVLPLSQEKSQAKN-----LNLDAS---------SNQSEEKSPKEATIEQAEEIIEKFLTALNLRSSSKI 71 (623)
T ss_pred hhhhhhhhhhcccccccccccccc-----cCCCcc---------hhhhcchhHHHhhhhhHHHHHHHHhhhcccchhhhh
Confidence 344455555555555555555444 333332 12222222 6778888888888888753 222
Q ss_pred c--cCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccC
Q 037360 88 W--DTGPGEVSEFLGAIDEVQTLIDSFSGVSVNENGRVRELLYRANNIVQMAMLRLQEELIHILVHHKLYFEPEYVSFHS 165 (642)
Q Consensus 88 ~--~~~~~~~~~yL~av~~l~~~~~~l~~~~~~~~~~~~~~l~ra~~Ll~~am~~Le~eF~~lL~~~~~~~~p~~~~~~~ 165 (642)
+ ..++.++..|+++|++|++++.++.+.+... +.+....++..+++.||.+||+||++||..++.+++|+.+..++
T Consensus 72 i~~~~~~~e~~~~~~~v~~l~~~l~~l~s~~~~~--~~~~~~~~~d~l~~~am~~le~EF~~il~~~r~~~~~~~~~~~~ 149 (623)
T KOG2344|consen 72 ISFLESREEAKNFLSAVNTLQETLQFLVSQNGLQ--SSKLLKAQADSLLQIAMSRLEKEFRQILENNREELDPERLSVRL 149 (623)
T ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHHhcCCcc--hhhhHHHhHHHHHHHHHHHHHHHHHHHHHhcccccchHhhhhcc
Confidence 2 3678899999999999999999996443321 13345555556999999999999999999999999999887766
Q ss_pred cccccccccccccccchhhhhhhccCCCCCCCCcccccCCCCChhHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHH
Q 037360 166 CRADVIYDESFVSLEDESVEASQRVSNTGSVSGEYIVDLIHPQVVPDLKAIANAMIAANYDQEFCAAFIGARQDALNEYF 245 (642)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l~~~L 245 (642)
+..+..++++ .+..++.... ..............++.+|++++.+|+.||++|+++||.++|+++|..+|+++++++|
T Consensus 150 ~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~dLk~Ia~~mi~~gy~~eC~~~Y~~vrk~i~~e~l 227 (623)
T KOG2344|consen 150 RSSLNSKDEE-ASLNSDSKYS-ALSDEESFGDDEIEPDLFPPDVMTDLKAIAQRMIAAGYEKECFKVYKSIRKSILDESL 227 (623)
T ss_pred cccccccccc-cccccCcccc-cccccccccCceeeccCCCchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 5543322211 1100000000 0000000112233489999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCHHHhhccchhhhhHHHHhHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhHHHH
Q 037360 246 FVILELEKFSIDDVLKMKWSTLSSEIKKWNWAMKIIIRVYLTSEKQLCNKILGRFDTVCSLCFVEIAKATFLCLLNFGEA 325 (642)
Q Consensus 246 ~~~L~~e~~~~~~v~~~~w~~l~~~i~~w~~a~~~~v~~l~~~E~~L~~~vf~~~~~~~~~~F~~i~~~~~~~Ll~f~~~ 325 (642)
..||+++++++++++|+|+.++.+|++|++++++++++||++|+.||++||++.++....||.+|++.++++||+|+++
T Consensus 228 -~~L~~e~ls~~~vq~~~we~le~~I~~Wi~~~kv~v~~lf~~E~~Lcd~If~~~~~~~~~cF~eI~~~~~~~ll~F~ea 306 (623)
T KOG2344|consen 228 -VNLGVEKLSIEDVQRMDWEVLEGKIKKWIKAVKVAVSVLFEGEKKLCDQIFSDLESIVESCFPEIVKEAALQLLSFPEA 306 (623)
T ss_pred -HhcCeeeccHHHHhhccHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhccchh
Confidence 9999999999999999999999999999999999999999999999999999876532289999999999999999999
Q ss_pred HhhcCCChhHHhhhhhHHHHHHhhHHHHHHhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCcc
Q 037360 326 VAMGSTQPEKLFCLLDMYEVLDDLLLEIDSLLFEEAGSYIRIEFHELLRKLGHSARQAFQELQKAIAADSSMKPLPRGGI 405 (642)
Q Consensus 326 va~~~rs~eklf~lLdmye~L~~l~p~~~~lf~~~~~~~~~~~~~~~l~~L~~~~~~~~~ef~~~I~~~~s~~~~~~G~V 405 (642)
|+.++|+|||+|++||||+++.+++|+++.+|++.++++++.++..++++|+++++++|.||++.|+.+++++|++||||
T Consensus 307 va~~kr~pEklf~iLd~y~~i~~l~p~ie~lF~~~~~s~vr~~~~~~~~rL~~~~~~~~~efe~~I~~d~sk~pv~gG~V 386 (623)
T KOG2344|consen 307 VAISKRSPEKLFKLLDLYETIVELRPDIERLFSDASCSEVRSQALSLLKRLGEGVRSIFVEFESAIRKDSSKTPVPGGGV 386 (623)
T ss_pred eeeccCCHHHHHHHHHHHHHHHHHHHHHHHhccCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhhhcHHHHHHHHhcccCCCCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHHHhhhhcccchh
Q 037360 406 HPLTRYVMNYIKTLTIYDDTLNLLFEDQNMEDTHSIVESETEQDISPITFCPLACHLRSITSALECSLVVKSRLYREDSL 485 (642)
Q Consensus 406 h~lT~~vmnyl~~L~~y~~~l~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~KSk~ykd~aL 485 (642)
||||+||||||+.|++|+++|.++|..++ .+.. ...+ .+......++++.++.|||..|++||++||+.|+|++|
T Consensus 387 HpLTryvmnyl~~L~dy~~tL~~il~~~~-~~~~-~~~~---~~~~~~~~s~l~~~~~~ii~~L~~nLd~Ks~~Y~D~aL 461 (623)
T KOG2344|consen 387 HPLTRYVMNYLNFLADYKDTLEQLLMEDP-VDTS-LPKS---ESEDESSNSLLAVHIARIILALECNLDTKSKLYKDPAL 461 (623)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhccc-cccc-cCcc---cccccccccHHHHHHHHHHHHHHhhhHHHHhhccchhh
Confidence 99999999999999999999999999765 1110 0000 11223356899999999999999999999999999999
Q ss_pred hHHHHhhhHHHHHHHhhCCchhhhhchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCC-CCCccchhHHHHHHHHHH
Q 037360 486 RHIFLMNNIHYVVQKIKGSDLRIFFGDEWIRKHIGKFQQHATSYQRATWCSVLSFLRDDGH-CSNSVLKTSYKERCREFT 564 (642)
Q Consensus 486 ~~iFLmNN~~yI~~~v~~seL~~lLg~~w~~~~~~~~~q~~~~Y~~~sW~~vl~~L~~~~~-~~~~~~k~~iKekfk~FN 564 (642)
+|||||||+|||+++|++++|+.+|||+|+++|..+++||++.|++++|++|+++|.++++ +.++++|+.+||||++||
T Consensus 462 ~~lFlmNN~~yiv~kvkss~L~~llGd~wl~kh~~~~~qy~~~Y~r~sW~~vl~~L~~~~s~~~~~~~~~~~Kerfk~FN 541 (623)
T KOG2344|consen 462 SYLFLMNNLHYIVQKVKSSELRLLLGDDWLRKHEEKLRQYATSYERESWGKVLSLLTDEGSSSGGKKSKEVLKERFKLFN 541 (623)
T ss_pred HHHHHHhhHHHHHHHHhcchHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCHHHHHHHHHHHH
Confidence 9999999999999999988999999999999999999999999999999999999999872 222488999999999999
Q ss_pred HHHHHHHHhccceeccChHHHHHHHHHHHHHHHHHHHHHHHhhC------CCCCccccCHHHHHHHHHHhhCCCCCCcc
Q 037360 565 NAFEDVYKIQIQWCITDPQLKEDLRISTSLKVIHAYRTFIGRNR------ISDKHIKYTVDDLEKLLLDFFEGTWRTLR 637 (642)
Q Consensus 565 ~~FeE~~~~Q~~w~VpD~~LR~~Lr~~i~~~viPaY~~F~~r~~------~~~KyiKYtpe~le~~L~~LF~g~~~~~~ 637 (642)
++|||+|++|++|+||||+||++||.+|+++|+|+|++||+||+ +++|||||||+|||++|++||+|++.+..
T Consensus 542 ~~FeEv~k~Qs~wvV~D~~Lr~eLk~si~~~v~P~Yr~F~~r~~~~~~~k~~~kyikYtpedlE~~L~dLF~g~~~~~s 620 (623)
T KOG2344|consen 542 EQFEEVYKKQSQWVVPDPKLREELKISISEKVVPAYRSFYGRYRNSVSGKNPEKYIKYTPEDLENYLSDLFEGSPSSPS 620 (623)
T ss_pred HHHHHHHHhhCceecccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcccccCHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999987 68999999999999999999999994443
No 2
>PF03081 Exo70: Exo70 exocyst complex subunit; InterPro: IPR004140 The Exo70 protein forms one subunit of the exocyst complex. First discovered in Saccharomyces cerevisiae [], Exo70 and other exocyst proteins have been observed in several other eukaryotes, including humans. In S. cerevisiae, the exocyst complex is involved in the late stages of exocytosis, and is localized at the tip of the bud, the major site of exocytosis in yeast []. Exo70 interacts with the Rho3 GTPase []. This interaction mediates one of the three known functions of Rho3 in cell polarity: vesicle docking and fusion with the plasma membrane (the other two functions are regulation of actin polarity and transport of exocytic vesicles from the mother cell to the bud) []. In humans, the functions of Exo70 and the exocyst complex are less well characterised: Exo70 is expressed in several tissues and is thought to also be involved in exocytosis [].; GO: 0006887 exocytosis, 0000145 exocyst; PDB: 2PFV_A 2B7M_B 2B1E_A 2PFT_A.
Probab=100.00 E-value=1.8e-78 Score=655.52 Aligned_cols=358 Identities=41% Similarity=0.678 Sum_probs=317.8
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhHHHHHh---hcCCChhHHhhhhhHHHHHH
Q 037360 271 IKKWNWAMKIIIRVYLTSEKQLCNKILGRFDTVCSLCFVEIAKATFLCLLNFGEAVA---MGSTQPEKLFCLLDMYEVLD 347 (642)
Q Consensus 271 i~~w~~a~~~~v~~l~~~E~~L~~~vf~~~~~~~~~~F~~i~~~~~~~Ll~f~~~va---~~~rs~eklf~lLdmye~L~ 347 (642)
|++|++++++++..|+++|++||++||+..++.+..||.+++++++..|++|+++|+ ...++|+++|.+||||++|.
T Consensus 1 ~~~wi~~~~~~~~~l~~~E~~L~~~vf~~~~~~~~~~f~~i~~~~~~~ll~~~~~v~~~~~~~~~~~~lf~ll~~~~~l~ 80 (371)
T PF03081_consen 1 IKRWIQAYKVALKKLFQSERRLCDQVFPESSSIADECFAEIAKPPLLQLLNFADAVASVRNSQRSPEKLFELLDMYEALS 80 (371)
T ss_dssp T-SHHHHHHHHHHHHHHHHHHHHHHHSSCCCTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHCCHTCCCCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCChHHHHHHHHHHHHHH
Confidence 679999999999999999999999999998777999999999999999999999999 88899999999999999999
Q ss_pred hhHHHHHHhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ccCCCCCCCCcccchHHHHHHHHHHhhhcHHH
Q 037360 348 DLLLEIDSLLFEEAGSYIRIEFHELLRKLGHSARQAFQELQKAIAA--DSSMKPLPRGGIHPLTRYVMNYIKTLTIYDDT 425 (642)
Q Consensus 348 ~l~p~~~~lf~~~~~~~~~~~~~~~l~~L~~~~~~~~~ef~~~I~~--~~s~~~~~~G~Vh~lT~~vmnyl~~L~~y~~~ 425 (642)
+++|+++.+|.+.++..++.++.+++++|+++++++|.+|.+.|+. ++.+.+|+||+|||+|++|||||+.|++|+++
T Consensus 81 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~e~~~~i~~~~~~~~~~p~dg~Vh~lT~~vm~yl~~L~~y~~~ 160 (371)
T PF03081_consen 81 ELLPDLDSLFSGESCESIRQEFDELLKKLREAIRKILEEFEESIKNDSDSSSSVPSDGGVHPLTSYVMNYLKRLAEYRDT 160 (371)
T ss_dssp HHHCCCHHCTCC-S-HHHHTHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCGCS-TTS---HHHHHHHHHHHHHHCTHHH
T ss_pred HHhHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 77778889999999999999999999999999
Q ss_pred HHHHHhcccCCCCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHhhhHHHHHHHhhCCc
Q 037360 426 LNLLFEDQNMEDTHSIVESETEQDISPITFCPLACHLRSITSALECSLVVKSRLYREDSLRHIFLMNNIHYVVQKIKGSD 505 (642)
Q Consensus 426 l~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~KSk~ykd~aL~~iFLmNN~~yI~~~v~~se 505 (642)
|+.+|...+.++|.+..........++++.++++.||.++|++|+.||++||+.|+|++|++||||||+|||.+++++|+
T Consensus 161 l~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~ks~~y~d~~l~~iFLlNN~~yI~~~~~~s~ 240 (371)
T PF03081_consen 161 LESILQSDGDGNWLSESGPPSESSSSTDSQSSLSSYIADIISALESNLEAKSKSYKDPALRYIFLLNNYHYILKKLKRSE 240 (371)
T ss_dssp HHHCCCTT-GGGGS-SS--GGGS---CCHHHHHHHHHHHHHHHHHHHHHHHHCCHCTHHHHHHHHHHHHHHHHCCCCTSH
T ss_pred HHHHHHhccccccccccccccccccccCccchHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99999998877776433221111112346789999999999999999999999999999999999999999999999999
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCC----CCCCccchhHHHHHHHHHHHHHHHHHHhccceeccC
Q 037360 506 LRIFFGDEWIRKHIGKFQQHATSYQRATWCSVLSFLRDDG----HCSNSVLKTSYKERCREFTNAFEDVYKIQIQWCITD 581 (642)
Q Consensus 506 L~~lLg~~w~~~~~~~~~q~~~~Y~~~sW~~vl~~L~~~~----~~~~~~~k~~iKekfk~FN~~FeE~~~~Q~~w~VpD 581 (642)
|..+||++|++++..++++|.+.|++++|+||+++|.+++ +..++++|+.+|+||++||++|||+|+.|+.|+|||
T Consensus 241 l~~~lg~~~~~~~~~~~~~~~~~Y~~~sW~~v~~~L~~~~~~~~~~~~~~~~~~~ke~f~~Fn~~fee~~~~q~~~~vpD 320 (371)
T PF03081_consen 241 LKDLLGDDWEQRLSSKIEQYIKSYLRSSWGPVLSCLSDDSSSSGGKLSSKERELLKEKFKKFNSAFEEIYKAQKTWKVPD 320 (371)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHCHHHHHHHCTCCHHCC-T-SSS-HHHHHHHHHHHHHHHHHHHHHHHHHTT---S-
T ss_pred hhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCccHHHHHHHHHHHHHHHHHHHHcCcceecCC
Confidence 9999999999999999999999999999999999999952 245678899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhC----CCCCccccCHHHHHHHHHHh
Q 037360 582 PQLKEDLRISTSLKVIHAYRTFIGRNR----ISDKHIKYTVDDLEKLLLDF 628 (642)
Q Consensus 582 ~~LR~~Lr~~i~~~viPaY~~F~~r~~----~~~KyiKYtpe~le~~L~~L 628 (642)
|+||++||++|.++|+|+|++||+||+ |++|||||||++||++|++|
T Consensus 321 ~~LR~~Lr~~i~~~v~p~Y~~F~~~~~~~~~~~~Kyikyt~~~le~~l~~L 371 (371)
T PF03081_consen 321 PELREELRREIKEKVVPAYRRFYERYRNSQFNPEKYIKYTPEDLENMLNEL 371 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSHCCC-SS-HHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCccCHHHHHHHHHcC
Confidence 999999999999999999999999999 56899999999999999986
No 3
>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation.
Probab=99.32 E-value=5.9e-08 Score=111.60 Aligned_cols=513 Identities=14% Similarity=0.154 Sum_probs=274.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcccccCCCC-------CCccchhHHHHHHHHHHHHHhhhcCC--c
Q 037360 15 QHLIAAAHHILKLLGAIRNLSDDTRKLLADLDIHLSIMTGNTIN-------NGGEAIEVEKRLKCAERMVLRWQANQ--S 85 (642)
Q Consensus 15 ~~~~a~a~~i~~~L~~~~~lt~~~~~iL~~~d~~l~~~~~~~~p-------~~~~~~nie~~l~~~e~~i~~~d~~~--~ 85 (642)
..++..-+.+.+.|..-.+.-+.|..+-....+++..-.....+ ++...+.++..-+.+...+.+|--+. .
T Consensus 34 ~~~L~~f~~v~~~l~~~~~~v~~l~~~~~~~~~~l~~~~~~t~~ll~~~~~L~~~~~~~~~k~~ll~~f~~~f~Ls~~E~ 113 (618)
T PF06419_consen 34 QEFLKEFSPVNRQLKRLQSDVDKLNSSCDQMQDRLSAAKSETSDLLEEASELREQKEELELKKKLLDAFLERFTLSEEEE 113 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 34455555555555555555555555555555555544332222 11233444445555666667776665 3
Q ss_pred ccccCCccc-HHHHHHHHHHHHHHHHh---ccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 037360 86 MIWDTGPGE-VSEFLGAIDEVQTLIDS---FSGVSVNENGRVRELLYRANNIVQMAMLRLQEELIHILVHHKLYFEPEYV 161 (642)
Q Consensus 86 ~i~~~~~~~-~~~yL~av~~l~~~~~~---l~~~~~~~~~~~~~~l~ra~~Ll~~am~~Le~eF~~lL~~~~~~~~p~~~ 161 (642)
.++.++... -+.|..|++++++.-+. |=+..+. ...-+.++.....++.|..|| |+.+..+.+..
T Consensus 114 ~~L~~~~~~v~~~FF~~L~r~~~I~~~c~~LL~~~~~--~ag~~iM~~~~~~~e~a~erl---~~w~q~e~~~l------ 182 (618)
T PF06419_consen 114 DALTSGEEPVDDEFFDALDRVQKIHEDCKILLSTENQ--RAGLEIMEQMSKYLERAYERL---YRWVQRECRSL------ 182 (618)
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCc--hHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhhh------
Confidence 444544333 35899998888776652 3212211 123456666777777777666 22222221110
Q ss_pred cccCcccccccccccccccchhhhhhhccCCCCCCCCcccccCCCCChhHHHHHHHHHHHHCCChhHHHHHHHHHHHHHH
Q 037360 162 SFHSCRADVIYDESFVSLEDESVEASQRVSNTGSVSGEYIVDLIHPQVVPDLKAIANAMIAANYDQEFCAAFIGARQDAL 241 (642)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l 241 (642)
..+ -+.+++..-..|+.+.++. .+-+.|++.|+..|+..|
T Consensus 183 -----~~~--------------------------------~~~~~~~l~~al~~L~~rp---~lf~~~l~~~~~~R~~~l 222 (618)
T PF06419_consen 183 -----NLD--------------------------------NPEVSPLLRRALRYLRERP---VLFNYCLDEFAEARSKAL 222 (618)
T ss_pred -----hhc--------------------------------CcccchHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHHH
Confidence 000 0001222223444444443 467899999999999998
Q ss_pred HHHHHhhhccccc------CHHHhhccchhhhhHHHHhHHHHHHHHHHHHHHHHHHHHhhhcCCCCchh-----------
Q 037360 242 NEYFFVILELEKF------SIDDVLKMKWSTLSSEIKKWNWAMKIIIRVYLTSEKQLCNKILGRFDTVC----------- 304 (642)
Q Consensus 242 ~~~L~~~L~~e~~------~~~~v~~~~w~~l~~~i~~w~~a~~~~v~~l~~~E~~L~~~vf~~~~~~~----------- 304 (642)
-+.+...|..... +++ ...-+....=+.|=.|++. ..++|+.++..+|...+...
T Consensus 223 ~~~F~~aLt~g~~~~~~~rPIe-l~AhDP~RYvGDmLAwvHq-------~~a~E~E~l~~Lf~~~~~~~~~~~~~~~~~~ 294 (618)
T PF06419_consen 223 LRRFLDALTRGGPGGSPSRPIE-LHAHDPLRYVGDMLAWVHQ-------AIASEREFLESLFKFDEDEIAEGSSSGFDSN 294 (618)
T ss_pred HHHHHHHHcCCCCCCCCCCchh-hhccChHHHHHHHHHHHHH-------HhhhHHHHHHHHhcccccccccccccccccc
Confidence 8777577754322 121 1111111122345667775 45799999999998642210
Q ss_pred -----------hhhHHHHHHHHHHHHHhHHHHHhhcCCCh---hHHhhhhhHHHHHHhhHHHHHHhhhhcchhhHHHHHH
Q 037360 305 -----------SLCFVEIAKATFLCLLNFGEAVAMGSTQP---EKLFCLLDMYEVLDDLLLEIDSLLFEEAGSYIRIEFH 370 (642)
Q Consensus 305 -----------~~~F~~i~~~~~~~Ll~f~~~va~~~rs~---eklf~lLdmye~L~~l~p~~~~lf~~~~~~~~~~~~~ 370 (642)
+.+|..+|++ |=.-.+.|-.+...| -|+..+|.-|... |..+....+ .+.
T Consensus 295 ~~~~~~~~~lld~i~~~l~rp----lk~RvEQvi~se~~~i~~yki~~LL~fY~~~------~~k~i~~~s------~L~ 358 (618)
T PF06419_consen 295 PWSEELINELLDRILEGLCRP----LKIRVEQVISSEEDPITLYKIANLLSFYQMT------FSKLIGEDS------SLI 358 (618)
T ss_pred cchHHHHHHHHHHHHHHHhHH----HHHHHHHHHHcCCCccHHHHHHHHHHHHHHH------HHHHcCCCc------hHH
Confidence 0122222211 111122222222333 3667777777632 233332221 234
Q ss_pred HHHHHHHHHHHHH----HHHHHHHHHcccCCCCCCCCcccchHHHHHHHHHHhhhcHHHHHHHHhcccCCCCCccccccc
Q 037360 371 ELLRKLGHSARQA----FQELQKAIAADSSMKPLPRGGIHPLTRYVMNYIKTLTIYDDTLNLLFEDQNMEDTHSIVESET 446 (642)
Q Consensus 371 ~~l~~L~~~~~~~----~~ef~~~I~~~~s~~~~~~G~Vh~lT~~vmnyl~~L~~y~~~l~~il~~~~~~~~~~~~~~~~ 446 (642)
..++.|.+.|.+. +......+.+.....|++|=...+-....++-|+. ||..+.. .-. +
T Consensus 359 ~tl~~L~~~a~~~f~~~l~~~~~~l~~~~~~~~~~DL~PP~~l~d~l~~L~~----------il~~~~~-s~~--~---- 421 (618)
T PF06419_consen 359 ETLKELQDLAQKKFFSSLRDHVAKLLRSAPEPPPADLSPPEWLIDFLSLLRE----------ILDVYDS-SLS--P---- 421 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHH----------HHHHhhc-ccC--C----
Confidence 4555555555554 44444455555233445565555544443333333 3332210 000 0
Q ss_pred ccCCCCCCcCcHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHhhhHHHHHHHhhCCchhhhhchHHHHHHHHHHHH--
Q 037360 447 EQDISPITFCPLACHLRSITSALECSLVVKSRLYREDSLRHIFLMNNIHYVVQKIKGSDLRIFFGDEWIRKHIGKFQQ-- 524 (642)
Q Consensus 447 ~~~~~~~~~~~l~~~i~~ii~~L~~~Le~KSk~ykd~aL~~iFLmNN~~yI~~~v~~seL~~lLg~~w~~~~~~~~~q-- 524 (642)
.........|...+..+|+-+....+..|....++.-..||++|+..+|...+..-+.. .+|..+...+++.
T Consensus 422 --~~~~~~~~~~~~Il~~~idpll~~c~~~a~~L~~~~~~~if~iNCl~~i~s~L~~~~~~----~~~~e~L~~~id~~~ 495 (618)
T PF06419_consen 422 --DDDRENDNDFKPILDEPIDPLLQMCQKSASPLAPKDDRAIFMINCLDLIQSTLSPFEFT----SERVEELQDQIDAHV 495 (618)
T ss_pred --ccchhhhhHHHHHHHHHhHHHHHHHHHHhhccCChhhhHHHHHHhHHHHHHHccChHhH----HHHHHHHHHHHHHHH
Confidence 00001125678888888888888888888877776667899999999999998764321 2333333333332
Q ss_pred -------HHHHHHHhhHHHHHHhhc----cCC-----CCCCccchhHHHHHHHHHHHHHHHH-HHhccc-eeccChHHHH
Q 037360 525 -------HATSYQRATWCSVLSFLR----DDG-----HCSNSVLKTSYKERCREFTNAFEDV-YKIQIQ-WCITDPQLKE 586 (642)
Q Consensus 525 -------~~~~Y~~~sW~~vl~~L~----~~~-----~~~~~~~k~~iKekfk~FN~~FeE~-~~~Q~~-w~VpD~~LR~ 586 (642)
+...-.+..-+++...+. +.. +.....+.+.++.-...|+.-+--. .-.|.. -.+.+|.+|+
T Consensus 496 ~~Lv~~Q~~~lL~~sGL~~~~~~l~~i~~~~~~~~pls~~p~~~~~~l~~a~~kld~fL~sa~~d~~~~L~~L~Sp~l~~ 575 (618)
T PF06419_consen 496 DTLVEEQASFLLERSGLGDLYNALNMIFFDYDMYGPLSENPGMDPDSLSNALQKLDDFLPSALTDAQPNLFKLQSPKLRD 575 (618)
T ss_pred HHHHHHHHHHHHHHCCcHHHHHHHHhhccCCcccCCcccCccCCHHHHHHHHHHHHHHHcccchhhhHHHHHhcCHHHHH
Confidence 222222334456666665 221 1123455555555555554443222 122333 3478999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCC-C---ccccCHHHHHHHH
Q 037360 587 DLRISTSLKVIHAYRTFIGRNRISD-K---HIKYTVDDLEKLL 625 (642)
Q Consensus 587 ~Lr~~i~~~viPaY~~F~~r~~~~~-K---yiKYtpe~le~~L 625 (642)
.++......++-+|..||+...++. . -..+||++|..+|
T Consensus 576 ~I~~~a~~~f~~~Y~~v~~~v~d~~n~y~sl~~~tpeeI~~LL 618 (618)
T PF06419_consen 576 DIRERAFERFCKAYEKVYEAVMDPDNGYESLFPRTPEEIRTLL 618 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChhcccccccCCCHHHHhhcC
Confidence 9999999999999999999988432 3 4679999998764
No 4
>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=98.57 E-value=0.00039 Score=78.56 Aligned_cols=423 Identities=14% Similarity=0.169 Sum_probs=235.9
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcccccCCCCCCccchhHHHHHHH---HHHHHHhhhc----CC---cccc
Q 037360 19 AAAHHILKLLGAIRNLSDDTRKLLADLDIHLSIMTGNTINNGGEAIEVEKRLKC---AERMVLRWQA----NQ---SMIW 88 (642)
Q Consensus 19 a~a~~i~~~L~~~~~lt~~~~~iL~~~d~~l~~~~~~~~p~~~~~~nie~~l~~---~e~~i~~~d~----~~---~~i~ 88 (642)
.....+...+...+++=..|...|.+|+..|+.+...|.-+|.....+...|+. +++.+.++-. .+ ..|.
T Consensus 14 ~~~~~Lh~~i~~cd~~L~~le~~L~~Fq~~L~~iS~eI~~LQ~~S~~l~~~L~Nrk~~~~~L~~~i~~i~ipP~lI~~I~ 93 (508)
T PF04129_consen 14 ENFADLHNQIQECDSILESLEEMLSNFQNDLGSISSEIRSLQERSSSLNVKLKNRKAVEEKLSPFIDDIVIPPDLIRSIC 93 (508)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCHHHHHhHh
Confidence 345667778888899999999999999999999999888888666666555443 3333433332 22 4444
Q ss_pred cCCcccHHHHHHHH-HHHHHHHHhccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccCcc
Q 037360 89 DTGPGEVSEFLGAI-DEVQTLIDSFSGVSVNENGRVRELLYRANNIVQMAMLRLQEELIHILVHHKLYFEPEYVSFHSCR 167 (642)
Q Consensus 89 ~~~~~~~~~yL~av-~~l~~~~~~l~~~~~~~~~~~~~~l~ra~~Ll~~am~~Le~eF~~lL~~~~~~~~p~~~~~~~~~ 167 (642)
+|+-++ .|+..+ ..+.+..............+..+.......|-..|..|+-+-|-.-+..-+.|..+..+
T Consensus 94 ~~~v~e--~~~~~~~~~~~k~~~~~~~~~~~~~~a~~d~~~~Le~L~~ka~~rir~fl~~kI~~lr~~~tn~q~------ 165 (508)
T PF04129_consen 94 EGPVNE--QYIEELLELLKKKIFFSKDQSFKDSKAIKDVKPELEKLKNKAVERIRDFLLKKIKSLRKPKTNSQI------ 165 (508)
T ss_pred cCCCCH--HHHHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHH------
Confidence 544333 666664 44444444332111111123455667788889999999999888888887766322111
Q ss_pred cccccccccccccchhhhhhhccCCCCCCCCcccccCCCCChhHHHHHHHHHHHHCC--ChhHHHHHHHHHHHHHH----
Q 037360 168 ADVIYDESFVSLEDESVEASQRVSNTGSVSGEYIVDLIHPQVVPDLKAIANAMIAAN--YDQEFCAAFIGARQDAL---- 241 (642)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~L~~Ia~~m~~~g--~~~e~~~~Y~~~R~~~l---- 241 (642)
+. ..+-.-+.+...|.... ...|+.++|++.=+.+.
T Consensus 166 -------------------------------------iQ-~~LLk~~~~~~FL~~~~~~~a~El~~~Yv~tM~~~Y~~~F 207 (508)
T PF04129_consen 166 -------------------------------------IQ-QVLLKYKELFQFLKKHSPELAKELRQAYVETMSWYYSSYF 207 (508)
T ss_pred -------------------------------------HH-HHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 12334455666665433 24566666665332222
Q ss_pred H---HHHHhhhcccccC-------------------------------HH---Hhhc--c------chh--------hhh
Q 037360 242 N---EYFFVILELEKFS-------------------------------ID---DVLK--M------KWS--------TLS 268 (642)
Q Consensus 242 ~---~~L~~~L~~e~~~-------------------------------~~---~v~~--~------~w~--------~l~ 268 (642)
. .+| ..|-..... .+ ++.+ . +.- ..|
T Consensus 208 ~~Y~~~L-~kl~~~~~~~~~dL~g~~~~~~~~~~s~~~~~~~~~~~Fslg~R~~iL~~~~~~p~i~~~~a~~~~~k~~~E 286 (508)
T PF04129_consen 208 KRYIRSL-EKLQLRIIDSKDDLIGVEDSSKGGFFSSKSSLKNRSSVFSLGRRIDILNSELDAPIIVPQIAEDNSQKYPIE 286 (508)
T ss_pred HHHHHHH-HHHHhhcccccccccCCCccccccccCCCcccccchhhhhhhHHHHHHhhcccCCccccchhhcccccCCHH
Confidence 1 122 222111000 00 0111 0 000 123
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhHHHHHhhcCCChhHHhhhhhHHHHHHh
Q 037360 269 SEIKKWNWAMKIIIRVYLTSEKQLCNKILGRFDTVCSLCFVEIAKATFLCLLNFGEAVAMGSTQPEKLFCLLDMYEVLDD 348 (642)
Q Consensus 269 ~~i~~w~~a~~~~v~~l~~~E~~L~~~vf~~~~~~~~~~F~~i~~~~~~~Ll~f~~~va~~~rs~eklf~lLdmye~L~~ 348 (642)
...+.|..++- --..+|+..|...|...+.....+|.+|..+++..+..|.+..-....++--++.++.+-. .
T Consensus 287 ~iFRS~~~~L~----Dn~t~Ey~F~~~FF~~~~~~~~~if~~If~~t~~~~~~~~~~~l~~~~D~iglll~Irl~~---~ 359 (508)
T PF04129_consen 287 EIFRSLNKALI----DNATSEYLFISEFFSGSGDAAEDIFNQIFEPTFSLLQEFTEQLLSNSYDAIGLLLCIRLNQ---R 359 (508)
T ss_pred HHHHHHHHHHH----HhhhHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH---H
Confidence 33334433331 1246899999999998555566789999888888888887764322233333333333222 2
Q ss_pred hHHHHHHhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCC-CCCCCcccchHHHHHHHHHHhhhcHHHHH
Q 037360 349 LLLEIDSLLFEEAGSYIRIEFHELLRKLGHSARQAFQELQKAIAADSSMK-PLPRGGIHPLTRYVMNYIKTLTIYDDTLN 427 (642)
Q Consensus 349 l~p~~~~lf~~~~~~~~~~~~~~~l~~L~~~~~~~~~ef~~~I~~~~s~~-~~~~G~Vh~lT~~vmnyl~~L~~y~~~l~ 427 (642)
..-.+ .......+..-+..+..-|=-....++..=.+.|++-..+. ..++.++|++|+---.|+..|.
T Consensus 360 ~~~~~----~~R~ip~ld~y~~~~~~~LWprF~~i~d~nieSlk~~~~~~~~~~~~~PH~itrRyaef~~sll------- 428 (508)
T PF04129_consen 360 YQFEM----QRRRIPVLDSYLNSLLMLLWPRFQKIMDANIESLKKADPKKLGSIDTRPHYITRRYAEFLSSLL------- 428 (508)
T ss_pred HHHHH----HhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCccCChHHHHHHHHHHHHHH-------
Confidence 22111 11222223333444444444455566666666777654433 3478899999986555544433
Q ss_pred HHHhcccCCCCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHhhhHHHHHHHhhCCchh
Q 037360 428 LLFEDQNMEDTHSIVESETEQDISPITFCPLACHLRSITSALECSLVVKSRLYREDSLRHIFLMNNIHYVVQKIKGSDLR 507 (642)
Q Consensus 428 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~KSk~ykd~aL~~iFLmNN~~yI~~~v~~seL~ 507 (642)
.+-... +...+...+.++-..++.-|..-|+.++++..+.+||.||+.+|+..+......
T Consensus 429 ~L~~~~--------------------~~~~~~~~l~~L~~~~~~ll~~~s~~~~~~k~~~iFLiNNY~lIl~iL~~~~~~ 488 (508)
T PF04129_consen 429 KLSSEH--------------------PDEQLEPSLNRLRREVEDLLTRLSKEFKDRKEREIFLINNYDLILSILSERTGK 488 (508)
T ss_pred HHhccC--------------------chhhHHHHHHHHHHHHHHHHHHHHHhcccccccceehHHHHHHHHHHHHhcccc
Confidence 331111 011245556666666666666667778888889999999999999999875332
Q ss_pred hhhchHHHHHHHHHHHHHHHHH
Q 037360 508 IFFGDEWIRKHIGKFQQHATSY 529 (642)
Q Consensus 508 ~lLg~~w~~~~~~~~~q~~~~Y 529 (642)
.+.+ ...+.+.++.+...|
T Consensus 489 --~~~e-~~~~~~~l~~~~~~f 507 (508)
T PF04129_consen 489 --LSKE-QKHFFELLQARTEEF 507 (508)
T ss_pred --chHH-HHHHHHHHHHHHhhc
Confidence 1222 234445555555544
No 5
>KOG1961 consensus Vacuolar sorting protein VPS52/suppressor of actin Sac2 [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]
Probab=98.38 E-value=0.0075 Score=66.73 Aligned_cols=129 Identities=14% Similarity=0.211 Sum_probs=83.7
Q ss_pred HHHhhhhhhHHHHHHHHHhhhhhhcccccCCCCCCccchhHHHHHH---HHHHHHHhhhcCC-------cccccCCcccH
Q 037360 26 KLLGAIRNLSDDTRKLLADLDIHLSIMTGNTINNGGEAIEVEKRLK---CAERMVLRWQANQ-------SMIWDTGPGEV 95 (642)
Q Consensus 26 ~~L~~~~~lt~~~~~iL~~~d~~l~~~~~~~~p~~~~~~nie~~l~---~~e~~i~~~d~~~-------~~i~~~~~~~~ 95 (642)
..+..-+++-.+|...|++|+.+|+++...+.-+|..++.|...|+ +++..+.++...- ..|.+ ++-+-
T Consensus 82 Nqi~~cd~Vl~rme~~L~~FQ~~L~sissDI~~lqekS~~m~~~L~Nrq~v~s~Ls~fVdd~iVpp~lI~~I~~-g~vne 160 (683)
T KOG1961|consen 82 NQIRACDSVLERMETMLSSFQSDLSSISSDIKILQEKSNDMQLRLENRQAVESKLSQFVDDLIVPPELIKTIVD-GDVNE 160 (683)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHhccccCCHHHHHHHHc-CCCCc
Confidence 3455556777889999999999999998887777766666666554 4555566665432 23334 33444
Q ss_pred HHHHHHHHHHHHHHHhcc-CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 037360 96 SEFLGAIDEVQTLIDSFS-GVSVNENGRVRELLYRANNIVQMAMLRLQEELIHILVHHKLY 155 (642)
Q Consensus 96 ~~yL~av~~l~~~~~~l~-~~~~~~~~~~~~~l~ra~~Ll~~am~~Le~eF~~lL~~~~~~ 155 (642)
..|++++.+|..-+..-+ .-......+.++.-.-.+.|-+.|+.|.-+-.-.-+..-++|
T Consensus 161 ~~f~~~LeeL~~Kl~~v~~dq~~k~a~a~~Dv~~lLdkLR~KAi~kir~~IlqkI~~fRkp 221 (683)
T KOG1961|consen 161 PEFLEALEELSHKLKLVELDQSNKDAKALKDVEPLLDKLRLKAIEKIREFILQKIKAFRKP 221 (683)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 599999999988777654 111111112344555577888889988866555555555554
No 6
>KOG3758 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.28 E-value=0.014 Score=65.05 Aligned_cols=366 Identities=13% Similarity=0.163 Sum_probs=174.8
Q ss_pred ChhHHHHHHHHHHHHC-CChhHHHHHHHHHHHHHHHHHHHhhh--cc-cccC--HHHhhccchhhhhHHHHhHHHHHHHH
Q 037360 208 QVVPDLKAIANAMIAA-NYDQEFCAAFIGARQDALNEYFFVIL--EL-EKFS--IDDVLKMKWSTLSSEIKKWNWAMKII 281 (642)
Q Consensus 208 ~~i~~L~~Ia~~m~~~-g~~~e~~~~Y~~~R~~~l~~~L~~~L--~~-e~~~--~~~v~~~~w~~l~~~i~~w~~a~~~~ 281 (642)
++-+-|++-..++... -.-+.|++-|+..|+..|-.-+...| |- -..+ |+ +...+.-..=+.+=.|++.
T Consensus 222 E~~~il~kA~~~L~~~p~lfk~~ide~~~aR~~~L~~~Fisaltrg~~~~~PrpIe-l~ahDPlRyIGDmLawlHq---- 296 (655)
T KOG3758|consen 222 EVSPILRKAFVFLSSRPVLFKYLIDEVGTARSQSLLRQFISALTRGGPGGMPRPIE-LHAHDPLRYIGDMLAWLHQ---- 296 (655)
T ss_pred hhHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcc-ccCCChHHHHHHHHHHHHH----
Confidence 3445555555555432 23578999999999977654443777 21 1111 22 1111111112335567765
Q ss_pred HHHHHHHHHHHHhhhcCCCC---------c-------------hhhhhHHHHHHHHHHHHHhHHHHHhhcCCChhH---H
Q 037360 282 IRVYLTSEKQLCNKILGRFD---------T-------------VCSLCFVEIAKATFLCLLNFGEAVAMGSTQPEK---L 336 (642)
Q Consensus 282 v~~l~~~E~~L~~~vf~~~~---------~-------------~~~~~F~~i~~~~~~~Ll~f~~~va~~~rs~ek---l 336 (642)
..+.|+++...+|.-.. + .-+.|+..+|++.-.. ++.|-..-.++.- +
T Consensus 297 ---~ia~Ekelv~aLfd~~~~d~q~n~~~~en~~~vl~~~dn~lld~i~~gvcrPlkvR----vEqil~~e~~~Iilfki 369 (655)
T KOG3758|consen 297 ---AIANEKELVEALFDFKKEDLQDNISISENLPNVLGGIDNKLLDDILEGVCRPLKVR----VEQILQAEKNAIILFKI 369 (655)
T ss_pred ---HhhhHHHHHHHHhcchhhhhccCCCchhHhHHHHhchhhhHHHHHHHHhcchhHHH----HHHHHHcCcCceeehhH
Confidence 45789999999883110 0 1113444444432222 3333333345543 3
Q ss_pred hhhhhHHHHHHhhHHHHHHhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcccC-CCCCC-CCcccchHH-HH
Q 037360 337 FCLLDMYEVLDDLLLEIDSLLFEEAGSYIRIEFHELLRKLGHSARQAFQELQKA-IAADSS-MKPLP-RGGIHPLTR-YV 412 (642)
Q Consensus 337 f~lLdmye~L~~l~p~~~~lf~~~~~~~~~~~~~~~l~~L~~~~~~~~~ef~~~-I~~~~s-~~~~~-~G~Vh~lT~-~v 412 (642)
..+|.-|.. .|+.+..+++ .+...++.|.++++.+|-...+. +++-.- ..+|| |=...|-++ ++
T Consensus 370 ~nlL~FY~~------~fs~~v~~ds------~l~~~l~~L~d~s~q~~~~~l~~~~~~l~~~~l~p~~DLlPpp~v~~~l 437 (655)
T KOG3758|consen 370 SNLLKFYRV------TFSKLVQDDS------ALLNTLKELEDISKQRFIGYLEDHVKKLMRKELSPPSDLLPPPAVREYL 437 (655)
T ss_pred HHHHHHHHH------HHHHHhcccH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCHHHHHHH
Confidence 444444532 2333333322 24566777777777765544442 222111 22343 655555544 44
Q ss_pred HHHHHHhhhcHHHHHHHHhcccCCCCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHhh
Q 037360 413 MNYIKTLTIYDDTLNLLFEDQNMEDTHSIVESETEQDISPITFCPLACHLRSITSALECSLVVKSRLYREDSLRHIFLMN 492 (642)
Q Consensus 413 mnyl~~L~~y~~~l~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~KSk~ykd~aL~~iFLmN 492 (642)
+++...+.-|..++.... +. ..+....++..+.-++..-...-+.+-. -.|.+. -+||+|
T Consensus 438 ~ll~ei~~~~~a~~~~~d-----~~-------------~~df~~l~s~vldpilq~c~~sae~~lp-~~d~~~-~if~iN 497 (655)
T KOG3758|consen 438 NLLVEIFEIYEASHTAED-----GE-------------QLDFKLLLSCVLDPILQMCQKSAEAHLP-TSDKGS-LIFMIN 497 (655)
T ss_pred HHHHHHHHHhhhhhcccc-----cc-------------ccchHHHHHHHHHHHHHHHHHHHHhcCC-Cccccc-ceehhh
Confidence 444444433433332210 00 1112234445455555554444444422 123332 499999
Q ss_pred hHHHHHHHhhCCchhhhhchHHHHHHHHHHHHHHHHH---------HHhhHHHHHHhhccCCC------CCCccchhHHH
Q 037360 493 NIHYVVQKIKGSDLRIFFGDEWIRKHIGKFQQHATSY---------QRATWCSVLSFLRDDGH------CSNSVLKTSYK 557 (642)
Q Consensus 493 N~~yI~~~v~~seL~~lLg~~w~~~~~~~~~q~~~~Y---------~~~sW~~vl~~L~~~~~------~~~~~~k~~iK 557 (642)
..+.|...+..-+. +- .-......+++.|...- .+..-++..+.+.+..+ ...+.+-..++
T Consensus 498 cL~~iks~l~~~e~---~~-~~~e~lq~~ie~~~d~L~t~q~s~ll~~~GLs~~~q~~~~~~p~~~~ls~~~~l~s~~~~ 573 (655)
T KOG3758|consen 498 CLDLIKSRLARYEF---LD-ERVEMLQAKIEAYLDTLVTLQVSFLLENTGLSDLYQKFNMITPEDSVLSLDPDLESALLD 573 (655)
T ss_pred hHHHHHhHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHhcCcchhhhhccccccHHHHH
Confidence 99999887754211 11 11111222222222111 12223333333332211 11223333344
Q ss_pred HHHHHHHHHHHHHHHhccce------eccChHHHHHHHHHHHHHHHHHHHHHHHhhCC-------C-CCccccCHHHHHH
Q 037360 558 ERCREFTNAFEDVYKIQIQW------CITDPQLKEDLRISTSLKVIHAYRTFIGRNRI-------S-DKHIKYTVDDLEK 623 (642)
Q Consensus 558 ekfk~FN~~FeE~~~~Q~~w------~VpD~~LR~~Lr~~i~~~viPaY~~F~~r~~~-------~-~KyiKYtpe~le~ 623 (642)
+-+..|-. ....-... .+.-|.+|++++......++-+|..+|++-.+ | +--++++|+++..
T Consensus 574 ~~i~~fd~----~l~~~~~~~lpq~q~l~sp~~r~~i~kr~~~~~~~aY~~i~~al~~~~ngy~dPve~ll~~~~dq~~t 649 (655)
T KOG3758|consen 574 EAIVKFDM----FLHAPLNLTLPQLQQLTSPMVRDEICKRSAKKFVLAYEIIYKALINPYNGYKDPVESLLHFSPDQVDT 649 (655)
T ss_pred HHHHHHHH----HhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCChHHHHhcCCHHHhcc
Confidence 43333322 11122222 23478899999999999999999999999872 2 2335566666554
Q ss_pred HH
Q 037360 624 LL 625 (642)
Q Consensus 624 ~L 625 (642)
.+
T Consensus 650 ll 651 (655)
T KOG3758|consen 650 LL 651 (655)
T ss_pred cc
Confidence 43
No 7
>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8. This entry represents the subunit Exoc1 (Sec3). Sec3 binds to the C-terminal cytoplasmic domain of GLYT1 (glycine transporter protein 1). Sec3 is the exocyst component that is closest to the plasma membrane docking site and it serves as a spatial landmark in the plasma membrane for incoming secretory vesicles. Sec3 is recruited to the sites of polarised membrane growth through its interaction with Rho1p, a small GTP-binding protein.
Probab=97.88 E-value=0.066 Score=63.25 Aligned_cols=215 Identities=15% Similarity=0.230 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHcc-cCCCCCCC-CcccchHHHHHHHHHHhhhcHHHHHHHHhcccCCCCCccccc
Q 037360 368 EFHELLRKLGHSARQAFQELQKA-IAAD-SSMKPLPR-GGIHPLTRYVMNYIKTLTIYDDTLNLLFEDQNMEDTHSIVES 444 (642)
Q Consensus 368 ~~~~~l~~L~~~~~~~~~ef~~~-I~~~-~s~~~~~~-G~Vh~lT~~vmnyl~~L~~y~~~l~~il~~~~~~~~~~~~~~ 444 (642)
-+..++.++...+++.|..|.+. |+.- .++..... .||-| |++.+..|-..++.++.....+
T Consensus 438 fl~~~L~~l~~~~k~~f~~fv~~Qi~~ie~~k~~~k~r~GVl~-------~i~~fp~f~~~~E~~~~~~~~~-------- 502 (701)
T PF09763_consen 438 FLSNLLQKLQVRLKRLFDKFVDEQIKSIEETKVSKKKRKGVLP-------FIKKFPEFVKRVESMFSGAERA-------- 502 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCccch-------HHHHHHHHHHHHHHHHcccccc--------
Confidence 46778888888899999988874 2221 12222222 35544 6666666666777777643210
Q ss_pred ccccCCCCCCcCcHHHHHHHHHHHHHHHHHHhhhhcc-----------cchhhHHHHhhhHHHHHHHhhCCchhhhhchH
Q 037360 445 ETEQDISPITFCPLACHLRSITSALECSLVVKSRLYR-----------EDSLRHIFLMNNIHYVVQKIKGSDLRIFFGDE 513 (642)
Q Consensus 445 ~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~KSk~yk-----------d~aL~~iFLmNN~~yI~~~v~~seL~~lLg~~ 513 (642)
......+......++.++...|+..++.-. ...-.+|.++=|+||+...+..-.....| +.
T Consensus 503 -------~~~r~~vd~aY~kl~~a~~~~l~~~a~~~~~~~~~~~~~dk~~~~~~v~~leN~~~~~e~l~~~~~~~~l-~~ 574 (701)
T PF09763_consen 503 -------REDRSLVDKAYEKLVRAMFDSLERIAKLSPKNSGSQDPEDKEKLNYHVVLLENYHHFYEELSQLKINSVL-EE 574 (701)
T ss_pred -------chHHHHHHHHHHHHHHHHHHHHHHhcccCcccccccCccccccchhhHHHHHHHHHHHHHHhhccchhhH-HH
Confidence 012345788889999999999999997533 23457899999999999999875442233 45
Q ss_pred HHHHHHHHHHHHHHHHHHh----hHHHHHHhhccCC-----------CCCCccchhHHHHHHHH-----HHHHHHHHHHh
Q 037360 514 WIRKHIGKFQQHATSYQRA----TWCSVLSFLRDDG-----------HCSNSVLKTSYKERCRE-----FTNAFEDVYKI 573 (642)
Q Consensus 514 w~~~~~~~~~q~~~~Y~~~----sW~~vl~~L~~~~-----------~~~~~~~k~~iKekfk~-----FN~~FeE~~~~ 573 (642)
|.++-....+++...|.+. .++++..+..... +....-+|+.+|.-++. .-...+.+|++
T Consensus 575 ~~~~A~~~~~~~~~~Y~~~~l~r~~~kL~~F~~gve~l~~~~~~~ei~~~~~ySk~~l~kvl~~y~~kev~k~i~~l~kr 654 (701)
T PF09763_consen 575 FRKEAKQIYDEHLEAYVTFLLRRPFGKLLDFFEGVEALLQTVSPEEISYQAAYSKQELKKVLKSYPSKEVRKGIEALYKR 654 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccCchhcccchhccHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 6666566666666666654 4455555443211 12334566666666555 55678888887
Q ss_pred c-cce--e----ccChHHHHHHHHHHHHHHHHHHHHHHH
Q 037360 574 Q-IQW--C----ITDPQLKEDLRISTSLKVIHAYRTFIG 605 (642)
Q Consensus 574 Q-~~w--~----VpD~~LR~~Lr~~i~~~viPaY~~F~~ 605 (642)
= +.+ . ..+..|-+.+=.++.+..+-.|.+|.+
T Consensus 655 veKHf~~~~~~~~~~~~Ll~~vW~~~q~~~i~~~~~l~~ 693 (701)
T PF09763_consen 655 VEKHFSRDADDPSFEEDLLQVVWSAMQEEFIRQYERLET 693 (701)
T ss_pred HHHHcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 444 1 335667777777777766666666643
No 8
>PF04136 Sec34: Sec34-like family ; InterPro: IPR007265 Sec34 and Sec35 form a sub-complex in a seven-protein complex that includes Dor1. This complex is thought to be important for tethering vesicles to the Golgi [].; GO: 0006886 intracellular protein transport, 0005801 cis-Golgi network, 0016020 membrane
Probab=93.64 E-value=0.37 Score=45.89 Aligned_cols=91 Identities=8% Similarity=0.075 Sum_probs=67.1
Q ss_pred cchhHHHHHHHHHHHHHhhhcCC--cccccCC--cccHHHHHHHHHHHHHHHHhccCCCCCCCcchHHHHHHHHHHHHHH
Q 037360 62 EAIEVEKRLKCAERMVLRWQANQ--SMIWDTG--PGEVSEFLGAIDEVQTLIDSFSGVSVNENGRVRELLYRANNIVQMA 137 (642)
Q Consensus 62 ~~~nie~~l~~~e~~i~~~d~~~--~~i~~~~--~~~~~~yL~av~~l~~~~~~l~~~~~~~~~~~~~~l~ra~~Ll~~a 137 (642)
....++...+.|...+..|+.-. ...+.+| .-..+.|+.-+.+|...+.||+.++..+. ....+.|.+.++.+|
T Consensus 57 eq~~L~~~ae~I~~~L~yF~~Ld~itr~Ln~p~~sV~~~~F~~~L~~LD~cl~Fl~~h~~fke--a~~Y~~rf~q~ltRA 134 (157)
T PF04136_consen 57 EQTRLEELAEEISEKLQYFEELDPITRRLNSPGSSVNSDSFKPMLSRLDECLEFLEEHPNFKE--AEVYLIRFRQCLTRA 134 (157)
T ss_pred HHHHHHHHHHHHHHHhHHHhhHHHHHHHHcCCCCcccchHHHHHHHHHHHHHHHHHHhhhhhh--hHHHHHHHHHHHHHH
Confidence 34455556666666666666543 1111212 22467999999999999999998887763 667889999999999
Q ss_pred HHHHHHHHHHHHhhhcc
Q 037360 138 MLRLQEELIHILVHHKL 154 (642)
Q Consensus 138 m~~Le~eF~~lL~~~~~ 154 (642)
|.-+-.-|...|..-+.
T Consensus 135 l~lIk~y~~~~l~~~~~ 151 (157)
T PF04136_consen 135 LTLIKNYVVNTLRSATN 151 (157)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987653
No 9
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []. COG7 is required for normal Golgi morphology and trafficking. Mutation in COG7 causes a congenital disorder of glycosylation [].
Probab=91.55 E-value=37 Score=40.71 Aligned_cols=202 Identities=16% Similarity=0.215 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHhhhcccccCHHHhhccchhhhhHHHHhHHHHHHHHHHHHHHHH
Q 037360 210 VPDLKAIANAMIAANYDQEFCAAFIGARQDALNEYFFVILELEKFSIDDVLKMKWSTLSSEIKKWNWAMKIIIRVYLTSE 289 (642)
Q Consensus 210 i~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l~~~L~~~L~~e~~~~~~v~~~~w~~l~~~i~~w~~a~~~~v~~l~~~E 289 (642)
+...+...+.+..-|...++.+-|..+|+..|.+.= ....-.. .......|+..+--.+-.++..|
T Consensus 200 ~~~~~~~~~if~~i~R~~~l~~~Y~~~r~~~l~~~W-~~~~~~~-------------~~~~~~~~L~~fyd~ll~~l~~E 265 (766)
T PF10191_consen 200 VDAAKEYVKIFSSIGREPQLEQYYCKCRKAPLQRLW-QEYCQSD-------------QSQSFAEWLPSFYDELLSLLHQE 265 (766)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH-HHHhhhc-------------cchhHHHHHHHHHHHHHHHHHHH
Confidence 455666666677779999999999999998775432 1111000 01335667766544445688899
Q ss_pred HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHh-HHHHHhh-cCC-Chh-HHhhhhhHHHHHHhhHHHHHHhhhhcchh--
Q 037360 290 KQLCNKILGRFDTVCSLCFVEIAKATFLCLLN-FGEAVAM-GST-QPE-KLFCLLDMYEVLDDLLLEIDSLLFEEAGS-- 363 (642)
Q Consensus 290 ~~L~~~vf~~~~~~~~~~F~~i~~~~~~~Ll~-f~~~va~-~~r-s~e-klf~lLdmye~L~~l~p~~~~lf~~~~~~-- 363 (642)
.+-|.+||+....+-...+. ..+..|-. |..-|.. .+. .|. ++..++++|.+-.++.-.++.+|......
T Consensus 266 ~~w~~~vF~~~~~~~~~ll~----~~L~~L~PS~~~~l~~al~~~~~~~~L~~L~~l~~~t~~Fa~~l~~~l~~~~~~~~ 341 (766)
T PF10191_consen 266 LKWCSQVFPDESPVLPKLLA----ETLSALQPSFPSRLSSALKRAGPETKLETLIELYQATEHFARNLEHLLSSLPGESN 341 (766)
T ss_pred HHHHHHHcCCchhHHHHHHH----HHHHhcCccHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 99999999985421112222 22222211 2222211 112 222 36666677765444444444443331000
Q ss_pred ----------------------------hH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCcc
Q 037360 364 ----------------------------YI----------RIEFHELLRKLGHSARQAFQELQKAIAADSSMKPLPRGGI 405 (642)
Q Consensus 364 ----------------------------~~----------~~~~~~~l~~L~~~~~~~~~ef~~~I~~~~s~~~~~~G~V 405 (642)
.+ ..++.+..+.|.++....|.-+..+|.+=.. ...|-++
T Consensus 342 l~~~~~l~~al~~PF~~~q~~Yg~lE~~~L~~~L~~l~~~~~~~~d~v~~L~~s~~k~f~lae~Av~RC~~--fT~G~~~ 419 (766)
T PF10191_consen 342 LSKVEELLQALFEPFKPYQQRYGELERRFLSAQLSALDLESAELSDAVRRLEESIPKLFGLAEEAVDRCIA--FTGGYGV 419 (766)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--HhCCccH
Confidence 00 0123345677777777777777777765321 1123344
Q ss_pred cchHHHHHHHHHHhh-hcHHHHHHHHh
Q 037360 406 HPLTRYVMNYIKTLT-IYDDTLNLLFE 431 (642)
Q Consensus 406 h~lT~~vmnyl~~L~-~y~~~l~~il~ 431 (642)
..+..-+=+|+...+ .+..++..+-.
T Consensus 420 ~~Ll~Ald~~~~~y~~~~~~~l~~lr~ 446 (766)
T PF10191_consen 420 PGLLKALDSIFSQYLSSLTATLRSLRK 446 (766)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444433333 36666666543
No 10
>KOG2148 consensus Exocyst protein Sec3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.73 E-value=36 Score=39.11 Aligned_cols=226 Identities=14% Similarity=0.214 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccC--CCC-CCCCcccchHHHHHHHHHHhhhcHHHHHHHHhcccCCCCCcccccc
Q 037360 369 FHELLRKLGHSARQAFQELQKAIAADSS--MKP-LPRGGIHPLTRYVMNYIKTLTIYDDTLNLLFEDQNMEDTHSIVESE 445 (642)
Q Consensus 369 ~~~~l~~L~~~~~~~~~ef~~~I~~~~s--~~~-~~~G~Vh~lT~~vmnyl~~L~~y~~~l~~il~~~~~~~~~~~~~~~ 445 (642)
+.-.+..|.-.++.-|..|...-.+... +.. -.-|||-| |+-....|-...+.|+....
T Consensus 605 ls~tlgsllv~VkrqFdrfiq~qc~qieevki~kksk~gILP-------yv~rFenfa~raE~if~nae----------- 666 (867)
T KOG2148|consen 605 LSLTLGSLLVRVKRQFDRFIQNQCSQIEEVKIAKKSKIGILP-------YVFRFENFARRAEIIFENAE----------- 666 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-------cHHHHHHHHHHHHHHHhhhh-----------
Confidence 4445556666677778877764322211 111 13456666 56666777778888887432
Q ss_pred cccCCCCCCcCcHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHhhhHHHHHHHhhCCchhhhhchHHHHH-HHHHHHH
Q 037360 446 TEQDISPITFCPLACHLRSITSALECSLVVKSRLYREDSLRHIFLMNNIHYVVQKIKGSDLRIFFGDEWIRK-HIGKFQQ 524 (642)
Q Consensus 446 ~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~KSk~ykd~aL~~iFLmNN~~yI~~~v~~seL~~lLg~~w~~~-~~~~~~q 524 (642)
..+.+......++.+...+++.-|..|.... +.|-+|-|+|++...+-. |. +-+-+-.++ +......
T Consensus 667 --------rRtdlekaYtklvravfvgiek~Aqq~pKtp-~dVv~mENyh~~y~tLs~--Lk-is~lda~kkeaka~~~d 734 (867)
T KOG2148|consen 667 --------RRTDLEKAYTKLVRAVFVGIEKIAQQDPKTP-ADVVLMENYHHFYATLSD--LK-ISCLDAAKKEAKALYAD 734 (867)
T ss_pred --------hcchHHHHHHHHHHHHHHHHHHHHhcCCCCH-HHHHHHhhHHHHHHHHHH--Hh-ccchhHHHHHHHHHHHH
Confidence 2345777778889999999999888776632 468999999999877643 33 223332333 3445557
Q ss_pred HHHHHHHhhHHHHHHhhcc--CC------CC--------CCccchhHHHHHHH----H-HHHHHHHHHHhccceeccChH
Q 037360 525 HATSYQRATWCSVLSFLRD--DG------HC--------SNSVLKTSYKERCR----E-FTNAFEDVYKIQIQWCITDPQ 583 (642)
Q Consensus 525 ~~~~Y~~~sW~~vl~~L~~--~~------~~--------~~~~~k~~iKekfk----~-FN~~FeE~~~~Q~~w~VpD~~ 583 (642)
+.+.|...+.|..+..|.. ++ .| .-..+|..+|.-.+ + --..+|.+|++=..--+....
T Consensus 735 hl~ayV~~~~GrPLekln~Ffe~v~~~vaqGirpeeiSYQ~aFsk~elrkvi~qypgkEVkKglenlYKKveKnL~aeen 814 (867)
T KOG2148|consen 735 HLAAYVKESMGRPLEKLNTFFEGVNNKVAQGIRPEEISYQLAFSKQELRKVIKQYPGKEVKKGLENLYKKVEKNLLAEEN 814 (867)
T ss_pred HHHHHHHHHhcChHHHHHHHHHhhHHHHhcCCChhhhhHHHHhhHHHHHHHHHHcchhhHHHHHHHHHHHHHHhhhhhhh
Confidence 8888888788877766531 11 11 00112332332222 2 456788999874444445788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC----CCCCccccCHHHHHHH
Q 037360 584 LKEDLRISTSLKVIHAYRTFIGRNR----ISDKHIKYTVDDLEKL 624 (642)
Q Consensus 584 LR~~Lr~~i~~~viPaY~~F~~r~~----~~~KyiKYtpe~le~~ 624 (642)
|-+.+=.+.++-.+--|..|-+.-. +..--.-++.++|=..
T Consensus 815 LLqvvW~~mqeeFi~qy~~f~~lIakcYpgs~v~le~~iq~iLaf 859 (867)
T KOG2148|consen 815 LLQVVWHKMQEEFIDQYESFEQLIAKCYPGSNVPLEFEIQDILAF 859 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeeeHHHHHHH
Confidence 8888888888888888888866533 3222233555554433
No 11
>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins [].; GO: 0006887 exocytosis, 0048278 vesicle docking, 0005737 cytoplasm
Probab=88.42 E-value=62 Score=38.49 Aligned_cols=131 Identities=15% Similarity=0.245 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHhhhc-ccccCHHHhhccchhhh----------hHHHHhHHHHH
Q 037360 210 VPDLKAIANAMIAANYDQEFCAAFIGARQDALNEYFFVILE-LEKFSIDDVLKMKWSTL----------SSEIKKWNWAM 278 (642)
Q Consensus 210 i~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l~~~L~~~L~-~e~~~~~~v~~~~w~~l----------~~~i~~w~~a~ 278 (642)
...++.+|..|..-+-+..|++.|+..+.-+.+. ..++ .+.+..+ -.|+.+ ..........+
T Consensus 128 ~~~M~~~A~vL~~fngg~~~i~~fi~k~~~f~~~---~~~~~~~~~~~~----~~~~~l~d~~~~~~~~~~~l~~~~~~i 200 (710)
T PF07393_consen 128 YERMKEFAKVLLEFNGGSSCIDFFINKHEFFIDE---DQLDESNGFEDE----EIWEKLSDPDSHPPINEESLDAFFEDI 200 (710)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHhChhhhhh---hhhccccccchh----HHHHhccCcccccccchHHHHHHHHHH
Confidence 4788999999988777789999999987555522 1221 0111000 012111 12233444444
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCch----hhhhHHHHHHHHHHHHHhHHHHHhhcCCChhHHhhhh-hHHHHHHhhHHHH
Q 037360 279 KIIIRVYLTSEKQLCNKILGRFDTV----CSLCFVEIAKATFLCLLNFGEAVAMGSTQPEKLFCLL-DMYEVLDDLLLEI 353 (642)
Q Consensus 279 ~~~v~~l~~~E~~L~~~vf~~~~~~----~~~~F~~i~~~~~~~Ll~f~~~va~~~rs~eklf~lL-dmye~L~~l~p~~ 353 (642)
+..+..|.++++.||+...++ -..+|.+..+.-+..+|+-+.. .++....+.| ..|..+..+.-++
T Consensus 201 ----~~~i~~e~~iI~~VFp~~~~Vm~~fiervf~~~I~~~i~~lL~~a~~-----~s~~~YLr~l~~~y~~t~~lv~~L 271 (710)
T PF07393_consen 201 ----RDVINEESKIIDRVFPNPEPVMQKFIERVFEQVIQEYIESLLEEASS-----ISTLAYLRTLHGLYSQTKKLVDDL 271 (710)
T ss_pred ----HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 346789999999999875442 2345555555555555443322 1333333333 3455444444444
Q ss_pred HHh
Q 037360 354 DSL 356 (642)
Q Consensus 354 ~~l 356 (642)
...
T Consensus 272 ~~~ 274 (710)
T PF07393_consen 272 KEF 274 (710)
T ss_pred HHh
Confidence 444
No 12
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=63.16 E-value=60 Score=38.86 Aligned_cols=52 Identities=29% Similarity=0.280 Sum_probs=38.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhccceecc--ChHHHHHHHHHHHHHHHHHHHHHHH
Q 037360 551 VLKTSYKERCREFTNAFEDVYKIQIQWCIT--DPQLKEDLRISTSLKVIHAYRTFIG 605 (642)
Q Consensus 551 ~~k~~iKekfk~FN~~FeE~~~~Q~~w~Vp--D~~LR~~Lr~~i~~~viPaY~~F~~ 605 (642)
..|+.|-..+|.=| |++++.+|-.-.+- -| |.+.+|.+....|||+|.+=..
T Consensus 1012 ~~kenI~ql~KSkn--l~dtvar~i~~~~Qtsg~-lQ~a~resm~SsviPafEKScq 1065 (1283)
T KOG1916|consen 1012 IGKENINQLLKSKN--LEDTVARQIQAQFQTSGP-LQEALRESMESSVIPAFEKSCQ 1065 (1283)
T ss_pred hHHHHHHHHHhhcc--HHHHHHHHHHHHHhccch-HHHHHHHHhhhhccHHHHHHHH
Confidence 34566667777777 88888776444442 33 9999999999999999987543
No 13
>PRK10807 paraquat-inducible protein B; Provisional
Probab=54.86 E-value=30 Score=39.76 Aligned_cols=26 Identities=12% Similarity=0.261 Sum_probs=15.9
Q ss_pred CCCCCCchh-HHHHHHHHHHHHHHhhh
Q 037360 6 SVNPNHEGD-QHLIAAAHHILKLLGAI 31 (642)
Q Consensus 6 ~~~~~~~~~-~~~~a~a~~i~~~L~~~ 31 (642)
.++|+..+. +.+.+.+..|.+.+++-
T Consensus 406 pvIPt~ps~l~~l~~~~~~il~kin~l 432 (547)
T PRK10807 406 PIIPTVSGGLAQIQQKLMEALDKINNL 432 (547)
T ss_pred ceeecCCCCHHHHHHHHHHHHHHHhcC
Confidence 567776655 77766655555555444
No 14
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]
Probab=45.77 E-value=85 Score=38.63 Aligned_cols=47 Identities=15% Similarity=0.134 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHHHHHHHhccCCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 037360 94 EVSEFLGAIDEVQTLIDSFSGVSVNENGRVRELLYRANNIVQMAMLRLQE 143 (642)
Q Consensus 94 ~~~~yL~av~~l~~~~~~l~~~~~~~~~~~~~~l~ra~~Ll~~am~~Le~ 143 (642)
.+..|.++|++|..--..= +...........++|..|+..|+.+|.+
T Consensus 1665 ~lq~~~~~~~~l~~~r~~g---~~~ar~rAe~L~~eA~~Ll~~a~~kl~~ 1711 (1758)
T KOG0994|consen 1665 ILQKYYELVDRLLEKRMEG---SQAARERAEQLRTEAEKLLGQANEKLDR 1711 (1758)
T ss_pred HHHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6678888888875422211 1111112456778888888888888753
No 15
>COG2733 Predicted membrane protein [Function unknown]
Probab=41.92 E-value=1.5e+02 Score=32.25 Aligned_cols=92 Identities=16% Similarity=0.209 Sum_probs=60.0
Q ss_pred HHHHHHHHhhHHHHHHhhccCCCCCCccchhHHHHHHHHHHHHHHHHHHhccceeccChHHHHHHHHHHH---HHHHHHH
Q 037360 524 QHATSYQRATWCSVLSFLRDDGHCSNSVLKTSYKERCREFTNAFEDVYKIQIQWCITDPQLKEDLRISTS---LKVIHAY 600 (642)
Q Consensus 524 q~~~~Y~~~sW~~vl~~L~~~~~~~~~~~k~~iKekfk~FN~~FeE~~~~Q~~w~VpD~~LR~~Lr~~i~---~~viPaY 600 (642)
.....|....|+....+|..+- .+.+--.-|--++.|+.-++++.. |++||..|..-+. +.+++-|
T Consensus 289 ~~i~~~~~~~w~~~~~~l~~D~---e~~~s~l~~~l~~~~~~~Ge~l~~--------D~~lr~kln~~~~~aa~~l~e~~ 357 (415)
T COG2733 289 EAIATAAGDMWTSLSEWLKEDY---ESEDSMLRKRLARAVQSVGEELIA--------DDALRAKLNEHLVQAAERLAEEK 357 (415)
T ss_pred hHHHHHHHHHHHHHHHHHHhcc---cCchhHHHHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466788899999999998763 111111223357788888888855 9999998876543 3455556
Q ss_pred HHHHHhhCCCCCccccCHHHHHHHHHH
Q 037360 601 RTFIGRNRISDKHIKYTVDDLEKLLLD 627 (642)
Q Consensus 601 ~~F~~r~~~~~KyiKYtpe~le~~L~~ 627 (642)
..+++++- .+.-=+|+.+++.++|..
T Consensus 358 ~~~it~~I-~dTv~~wD~~elsr~iel 383 (415)
T COG2733 358 HAEITKHI-SDTVKRWDAEELSRQIEL 383 (415)
T ss_pred hHHHHHHH-HHHHhhcCHHHHHHHHHH
Confidence 55555543 222234888888887754
No 16
>KOG3821 consensus Heparin sulfate cell surface proteoglycan [Signal transduction mechanisms]
Probab=41.84 E-value=39 Score=38.17 Aligned_cols=67 Identities=21% Similarity=0.237 Sum_probs=50.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhccceeccChHHHHHHHHHHHHHHHHHHHHHHHhhC--------CCCCccccCHHHH
Q 037360 550 SVLKTSYKERCREFTNAFEDVYKIQIQWCITDPQLKEDLRISTSLKVIHAYRTFIGRNR--------ISDKHIKYTVDDL 621 (642)
Q Consensus 550 ~~~k~~iKekfk~FN~~FeE~~~~Q~~w~VpD~~LR~~Lr~~i~~~viPaY~~F~~r~~--------~~~KyiKYtpe~l 621 (642)
..=|..+-.+.+.|++.|+|+.+.= .+....+..-.|+++|-... .-.-|.-++-..+
T Consensus 94 ~~Lr~~l~s~~r~F~E~f~ell~~a--------------e~~l~~mF~~tYg~ly~qn~~~~~dlFtel~~y~~~~~~nl 159 (563)
T KOG3821|consen 94 SVLRFVLASNARKFDEFFLELLRNA--------------ENSLNAMFSKTYGSLYPQNAELFNDLFTELKLYYVGSNVNL 159 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhccccCCH
Confidence 3446677789999999999998752 23455577778888876654 3446788889999
Q ss_pred HHHHHHhhC
Q 037360 622 EKLLLDFFE 630 (642)
Q Consensus 622 e~~L~~LF~ 630 (642)
|++|++||.
T Consensus 160 ee~l~eff~ 168 (563)
T KOG3821|consen 160 EETLNEFFA 168 (563)
T ss_pred HHHHHHHHH
Confidence 999999985
No 17
>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known.
Probab=39.82 E-value=1.3e+02 Score=31.55 Aligned_cols=89 Identities=17% Similarity=0.241 Sum_probs=50.6
Q ss_pred cchhHHHHHHHHHHHHHhhhcCC--cccccCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcchHHHHHHHHHHHHHHHH
Q 037360 62 EAIEVEKRLKCAERMVLRWQANQ--SMIWDTGPGEVSEFLGAIDEVQTLIDSFSGVSVNENGRVRELLYRANNIVQMAML 139 (642)
Q Consensus 62 ~~~nie~~l~~~e~~i~~~d~~~--~~i~~~~~~~~~~yL~av~~l~~~~~~l~~~~~~~~~~~~~~l~ra~~Ll~~am~ 139 (642)
..+|+.+.++.++.+-.-++... ..++ +..+|.+|++-+.....-++...... .-+..-.+.++.+...-.
T Consensus 110 kr~~l~~ll~~L~~i~~v~~~~~~l~~ll-----~~~dy~~Al~li~~~~~~l~~l~~~~--c~~~L~~~L~e~~~~i~~ 182 (291)
T PF10475_consen 110 KRQNLKKLLEKLEQIKTVQQTQSRLQELL-----EEGDYPGALDLIEECQQLLEELKGYS--CVRHLSSQLQETLELIEE 182 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCHHHHHHHHHHHHHHHHhcccch--HHHHHhHHHHHHHHHHHH
Confidence 33455555555555444333332 2222 22367777666655555444322221 245666778888888888
Q ss_pred HHHHHHHHHHhhhcccCCCCcc
Q 037360 140 RLQEELIHILVHHKLYFEPEYV 161 (642)
Q Consensus 140 ~Le~eF~~lL~~~~~~~~p~~~ 161 (642)
+|+.+|..+.. .++|..+
T Consensus 183 ~ld~~l~~~~~----~Fd~~~Y 200 (291)
T PF10475_consen 183 QLDSDLSKVCQ----DFDPDKY 200 (291)
T ss_pred HHHHHHHHHHH----hCCHHHH
Confidence 99999888765 3566543
No 18
>KOG2047 consensus mRNA splicing factor [RNA processing and modification]
Probab=37.45 E-value=31 Score=39.77 Aligned_cols=70 Identities=16% Similarity=0.296 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHh-c---ccee-----------------ccChHHHHHHHHHHHHHHHHHHHHHHHhhCCC-------
Q 037360 559 RCREFTNAFEDVYKI-Q---IQWC-----------------ITDPQLKEDLRISTSLKVIHAYRTFIGRNRIS------- 610 (642)
Q Consensus 559 kfk~FN~~FeE~~~~-Q---~~w~-----------------VpD~~LR~~Lr~~i~~~viPaY~~F~~r~~~~------- 610 (642)
-|..||..||..... | +-|. +.|..||. |=...-..|-|.|-.|++.++-|
T Consensus 83 ~~~~vn~c~er~lv~mHkmpRIwl~Ylq~l~~Q~~iT~tR~tfdrALra-LpvtqH~rIW~lyl~Fv~~~~lPets~rvy 161 (835)
T KOG2047|consen 83 AYESVNNCFERCLVFMHKMPRIWLDYLQFLIKQGLITRTRRTFDRALRA-LPVTQHDRIWDLYLKFVESHGLPETSIRVY 161 (835)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcchHHHHHHHHHHHHHh-CchHhhccchHHHHHHHHhCCChHHHHHHH
Confidence 688888888876651 1 2221 12333321 12233457899999999999844
Q ss_pred CCccccCHHHHHHHHHHhh
Q 037360 611 DKHIKYTVDDLEKLLLDFF 629 (642)
Q Consensus 611 ~KyiKYtpe~le~~L~~LF 629 (642)
.+|+|+.|++.|++|.-|=
T Consensus 162 rRYLk~~P~~~eeyie~L~ 180 (835)
T KOG2047|consen 162 RRYLKVAPEAREEYIEYLA 180 (835)
T ss_pred HHHHhcCHHHHHHHHHHHH
Confidence 5999999999999998764
No 19
>TIGR02553 SipD_IpaD_SspD type III effector protein IpaD/SipD/SspD. These proteins are found within type III secretion operons and have been shown to be secreted by that system.
Probab=36.35 E-value=1.6e+02 Score=30.95 Aligned_cols=108 Identities=14% Similarity=0.086 Sum_probs=57.9
Q ss_pred hchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCCCCccchhHHHHHHHHHHHHHHHHHHhcc------------ce
Q 037360 510 FGDEWIRKHIGKFQQHATSYQRATWCSVLSFLRDDGHCSNSVLKTSYKERCREFTNAFEDVYKIQI------------QW 577 (642)
Q Consensus 510 Lg~~w~~~~~~~~~q~~~~Y~~~sW~~vl~~L~~~~~~~~~~~k~~iKekfk~FN~~FeE~~~~Q~------------~w 577 (642)
.+++.+..+...+.+|+..|+ +.+.+++-+.+-.+ ++++...||=..+.|-..++++..+.. .|
T Consensus 117 Ik~dYldvYa~lvk~YTd~yQ--~fn~~lSkls~~Is--aG~DGn~VkFd~~~lk~~l~~~~~Ky~~~~~~~pa~~~~~i 192 (308)
T TIGR02553 117 IGDSYLGVYENVVEGYTDFYQ--AFSDILSKMQDWIS--PGKDGNNVKLDVGKLKALLQQLIDHLPNQINSFPAQSDGGM 192 (308)
T ss_pred HHhhHHHHHHHHHHHHHHHHH--HHHHHHHHHhhhcc--cCCCCCeeeeCHHHHHHHHHHHHHHhccCccCCcccccccc
Confidence 456777888888999999997 57889988865431 111111222233333344444433333 33
Q ss_pred eccC-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccCHHHHHHHHHHhh
Q 037360 578 CITD-PQLKEDLRISTSLKVIHAYRTFIGRNRISDKHIKYTVDDLEKLLLDFF 629 (642)
Q Consensus 578 ~VpD-~~LR~~Lr~~i~~~viPaY~~F~~r~~~~~KyiKYtpe~le~~L~~LF 629 (642)
.++- .+.. ..++++.-.+-|+ .-+. .+ +|+.++..|..|+.+|=
T Consensus 193 ~~~s~~Ea~-~W~keLg~~v~~~-----~~~~-~G-~I~~dl~~i~~m~~sl~ 237 (308)
T TIGR02553 193 QLPKEADAR-RWRKELGLPVSCL-----QISD-SG-VVTVDPTPLIKMRDDLP 237 (308)
T ss_pred ccCcHHHHH-HHHHHhCCCCccc-----cccC-CC-eEEeChHHHHHHHHhcC
Confidence 3332 2222 2222221111111 1222 23 89999999999999983
No 20
>KOG3960 consensus Myogenic helix-loop-helix transcription factor [Transcription]
Probab=32.62 E-value=76 Score=32.30 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHhccceeccChHH--HHHHHHHH
Q 037360 558 ERCREFTNAFEDVYKIQIQWCITDPQL--KEDLRIST 592 (642)
Q Consensus 558 ekfk~FN~~FeE~~~~Q~~w~VpD~~L--R~~Lr~~i 592 (642)
-|+|+-|++||-+=+ ++-.=|...| =|-||.+|
T Consensus 128 RRLkKVNEAFE~LKR--rT~~NPNQRLPKVEILRsAI 162 (284)
T KOG3960|consen 128 RRLKKVNEAFETLKR--RTSSNPNQRLPKVEILRSAI 162 (284)
T ss_pred HHHHHHHHHHHHHHh--hcCCCccccccHHHHHHHHH
Confidence 479999999998833 3333333222 14456666
No 21
>PRK10807 paraquat-inducible protein B; Provisional
Probab=30.70 E-value=2.2e+02 Score=32.78 Aligned_cols=112 Identities=11% Similarity=0.126 Sum_probs=57.4
Q ss_pred hhhHHHHHHHHHhhhhhhcccccCCCCCCccchhHHHHHHHHHHHHHhhhcCC---cccccCCcc--cH-HHHHHHHHHH
Q 037360 32 RNLSDDTRKLLADLDIHLSIMTGNTINNGGEAIEVEKRLKCAERMVLRWQANQ---SMIWDTGPG--EV-SEFLGAIDEV 105 (642)
Q Consensus 32 ~~lt~~~~~iL~~~d~~l~~~~~~~~p~~~~~~nie~~l~~~e~~i~~~d~~~---~~i~~~~~~--~~-~~yL~av~~l 105 (642)
..+++++..+|.+++. .|+....++++.+|+.+++.+..++..- ..+.. ++. .+ .+.-++++++
T Consensus 416 ~~l~~~~~~il~kin~---------lple~i~~~l~~tL~~~~~tl~~l~~~l~~l~~ll~-~~~~~~Lp~~L~~TL~~l 485 (547)
T PRK10807 416 AQIQQKLMEALDKINN---------LPLNPMIEQATSTLSESQRTMRELQTTLDSLNKITS-SQSMQQLPADMQKTLREL 485 (547)
T ss_pred HHHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-CHHHHHHHHHHHHHHHHH
Confidence 3444555555555443 2344444556666666666666555432 11111 111 22 3455677777
Q ss_pred HHHHHhccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccc
Q 037360 106 QTLIDSFSGVSVNENGRVRELLYRANNIVQMAMLRLQEELIHILVHHKLYFEPEYVSFH 164 (642)
Q Consensus 106 ~~~~~~l~~~~~~~~~~~~~~l~ra~~Ll~~am~~Le~eF~~lL~~~~~~~~p~~~~~~ 164 (642)
..++..+.+ .+......+..++. +.++-.+++.|+..-.+ -|+.+.|.
T Consensus 486 ~~~l~~~~~--------~s~~~~~l~~tl~~-l~~~~r~lr~l~~~L~~--~P~aLi~g 533 (547)
T PRK10807 486 NRSMQGFQP--------GSPAYNKMVADMQR-LDQVLRELQPVLKTLNE--KSNALVFE 533 (547)
T ss_pred HHHHhhcCC--------CChHHHHHHHHHHH-HHHHHHHHHHHHHHHHh--CchhhhcC
Confidence 777776641 23444455455444 55555666666665433 26766643
No 22
>PHA01746 hypothetical protein
Probab=27.58 E-value=21 Score=31.49 Aligned_cols=21 Identities=14% Similarity=0.363 Sum_probs=15.8
Q ss_pred HHHHHHhhC-CCCCccccCHHH
Q 037360 600 YRTFIGRNR-ISDKHIKYTVDD 620 (642)
Q Consensus 600 Y~~F~~r~~-~~~KyiKYtpe~ 620 (642)
-..|+++|. -..|||||+|.+
T Consensus 76 Ia~FLeKYS~~LnkYVkFs~~n 97 (131)
T PHA01746 76 IAEFLEKYSDFLNEYVKFTPRN 97 (131)
T ss_pred HHHHHHHHHHHHHHHeeeccCC
Confidence 357888887 466899999854
No 23
>PF08855 DUF1825: Domain of unknown function (DUF1825); InterPro: IPR014954 These roteins are uncharacterised and are principally found in cyanobacteria.
Probab=26.31 E-value=2.7e+02 Score=24.80 Aligned_cols=55 Identities=9% Similarity=0.126 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccceeccChHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 037360 553 KTSYKERCREFTNAFEDVYKIQIQWCITDPQLKEDLRISTSLKVIHAYRTFIGRNR 608 (642)
Q Consensus 553 k~~iKekfk~FN~~FeE~~~~Q~~w~VpD~~LR~~Lr~~i~~~viPaY~~F~~r~~ 608 (642)
-+.+++-++.......++.+.=..+.-.|++=+-.-.... +.++-.|+-||.|+.
T Consensus 7 SeiVq~e~~~if~~yq~l~~~~~~~~~fd~egK~~~Id~m-~~LidkqkiF~~Rl~ 61 (108)
T PF08855_consen 7 SEIVQDELQDIFEDYQELMQMGSKYGKFDREGKKIHIDKM-EELIDKQKIFYKRLE 61 (108)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 3567777777777888888877778778888766655554 588999999999998
No 24
>KOG4344 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.66 E-value=2.3e+02 Score=32.81 Aligned_cols=67 Identities=16% Similarity=0.329 Sum_probs=40.5
Q ss_pred HHHHhhhHH-HHHHHhhCC-chhh--hhchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCCCCccchhHHHHHHHH
Q 037360 487 HIFLMNNIH-YVVQKIKGS-DLRI--FFGDEWIRKHIGKFQQHATSYQRATWCSVLSFLRDDGHCSNSVLKTSYKERCRE 562 (642)
Q Consensus 487 ~iFLmNN~~-yI~~~v~~s-eL~~--lLg~~w~~~~~~~~~q~~~~Y~~~sW~~vl~~L~~~~~~~~~~~k~~iKekfk~ 562 (642)
-||+.||.| ||...|-.| ++.. -+|+ .+..+.+..-...|+ +|-+- +=.++++|+.
T Consensus 968 LiffiNnLHahIMeailhStgleFehqieE---aKdldeLiiiHdehL--atihd---------------hClLrdefka 1027 (1121)
T KOG4344|consen 968 LIFFINNLHAHIMEAILHSTGLEFEHQIEE---AKDLDELIIIHDEHL--ATIHD---------------HCLLRDEFKA 1027 (1121)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHhh---hcCHHHHHHHHHHHH--HHHHH---------------hhhHHHHHHH
Confidence 389999986 777777655 4432 2222 122333444455565 45443 3346678999
Q ss_pred HHHHHHHHHHh
Q 037360 563 FTNAFEDVYKI 573 (642)
Q Consensus 563 FN~~FeE~~~~ 573 (642)
|-.+.+.++..
T Consensus 1028 fkeAidkifhL 1038 (1121)
T KOG4344|consen 1028 FKEAIDKIFHL 1038 (1121)
T ss_pred HHHHHHHHHHH
Confidence 99998887654
Done!