BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037361
(529 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 214/480 (44%), Gaps = 60/480 (12%)
Query: 29 SKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSL 88
SK LPPGP P+IGN+ L+ + +I + GP+ T+ G PI+ +
Sbjct: 7 SKGKLPPGPTPLPIIGNM--LQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEA 64
Query: 89 AYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRR-NLTAEIMHPSRLR 147
+AL+ NG F+ R + PI++ + ISS G W+ +RR +LT LR
Sbjct: 65 VKEALIDNGEEFSGRGNS-PISQRITKGLGIISSN--GKRWKEIRRFSLTT-------LR 114
Query: 148 SYSHARKWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDH 200
++ ++ + + L++ + + DP ++ + C +V D D
Sbjct: 115 NFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQ 174
Query: 201 NQIKEIKNIHHS-RLLAFSRFRILNFWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRA- 258
N + +K + + R+L ++ N +P L ++LK+ V L R+
Sbjct: 175 NFLTLMKRFNENFRILNSPWIQVCNNFPLLIDCF----PGTHNKVLKN-----VALTRSY 225
Query: 259 -RKKMKEERL---MNKGKENVLCYVDTLLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTD 314
R+K+KE + +N ++ + C+ L+ ++ +V ++ AGT+
Sbjct: 226 IREKVKEHQASLDVNNPRDFIDCF---LIKMEQEKDNQKSEFNIENLVGTVADLFVAGTE 282
Query: 315 TTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRR 374
TTSTTL++ + L+K+P V K+ D + MPY AV+ E ++R
Sbjct: 283 TTSTTLRYGLLLLLKHPEVTAKV--QEEIDHVIGRHRSPCMQDRSHMPYTDAVVHE-IQR 339
Query: 375 H----PPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR 430
+ P G +PHAVT D ++IPK ++ ++ + D K + +P F P F+
Sbjct: 340 YSDLVPTG---VPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFL- 395
Query: 431 DESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAAD 490
D++G + MPF G+RIC G GLA + L F+ ++ F K+ D
Sbjct: 396 DKNGNF-----------KKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVD 444
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 196/477 (41%), Gaps = 39/477 (8%)
Query: 34 PPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKAL 93
PP P +P++G++ L K+ L + + G ++ +RIGS P++ ++ +AL
Sbjct: 18 PPEPWGWPLLGHVLTLGKN---PHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQAL 74
Query: 94 VQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRR---------NLTAEIMHPS 144
V+ G F RP L + + + Q S GP W RR ++ ++ S
Sbjct: 75 VRQGDDFKGRPD-LYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSS 133
Query: 145 RLRSYSHARKWVLEILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHNQ-- 202
H K + L+ R + + G + ++ ++ MCFG +
Sbjct: 134 SCYLEEHVSKEA-KALISRLQ-ELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDE 191
Query: 203 -IKEIKNIHHSRLLAFSRFRILNFWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKK 261
+ +KN H A S L+F+P +LR LQ K + + +K
Sbjct: 192 MLSLVKNTHEFVETA-SSGNPLDFFP-----ILRYLPNPALQRFKAFNQRFLWFL---QK 242
Query: 262 MKEERLMNKGKENVLCYVDTLLD-LQLPXXXXXXXXXXXXIVALCSEFLNAGTDTTSTTL 320
+E + K +V L + IV L ++ AG DT +T +
Sbjct: 243 TVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAI 302
Query: 321 QWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHPPGHF 380
W + LV P +Q K+ D ++PYL+A ILE R F
Sbjct: 303 SWSLMYLVTKPEIQRKI--QKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPF 360
Query: 381 VLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVV 440
+PH+ T D TL+G IPK V ++ DP++WEDP F+PERF+
Sbjct: 361 TIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFL---------TA 411
Query: 441 EDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDFS 497
+ I KMM FG+G+R C G LA + F+A L+ E+ G +VD +
Sbjct: 412 DGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLT 468
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 212/475 (44%), Gaps = 57/475 (12%)
Query: 29 SKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSL 88
SK LPPGP FP+IGN+ L+ +I L GP+ T+ +G +P + + +
Sbjct: 7 SKGKLPPGPTPFPIIGNI--LQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEA 64
Query: 89 AYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRS 148
+ALV G FA R + K++ S+A TW+ +RR LR+
Sbjct: 65 VKEALVDLGEEFAGRGSVPILEKVSKGLGIAFSNA---KTWKEMRR------FSLMTLRN 115
Query: 149 YSHARKWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHN 201
+ ++ + + L++ + + + DP ++ + C ++ D D
Sbjct: 116 FGMGKRSIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDEE 175
Query: 202 QIKEIKNIHHSR-------LLAFSRF-RILNFWPRLTKIVLRKKWAQFLQLLKDQENLLV 253
+K ++++H + L ++ F +L+++P + K +L K A +++ N ++
Sbjct: 176 FLKLMESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLL--KNADYIK------NFIM 227
Query: 254 PLIRARKKMKEERLMNKGKENVLCYVDTLLDLQLPXXXXXXXXXXXXIVALCSEFLNAGT 313
++ +K+ + +N ++ + C++ +++ ++A+ S+ AGT
Sbjct: 228 EKVKEHQKLLD---VNNPRDFIDCFL-----IKMEQENNLEFTLESLVIAV-SDLFGAGT 278
Query: 314 DTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLR 373
+TTSTTL++ + L+K+P V ++ D ++MPY AVI E R
Sbjct: 279 ETTSTTLRYSLLLLLKHPEVAARV--QEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQR 336
Query: 374 RHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDES 433
LPHAVT D + IPK + + + D K + +P F P F+ DES
Sbjct: 337 FIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFL-DES 395
Query: 434 GGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKA 488
G + MPF G+R+C G GLA + L F+ +++ F+ ++
Sbjct: 396 GNF-----------KKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQS 439
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 197/483 (40%), Gaps = 50/483 (10%)
Query: 34 PPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKAL 93
PPGP +P+IG++ L K+ L + + G ++ +RIGS P++ ++ +AL
Sbjct: 13 PPGPWGWPLIGHMLTLGKN---PHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQAL 69
Query: 94 VQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHAR 153
V+ G F RP I++ + S GP W RR + + L+S+S A
Sbjct: 70 VRQGDDFKGRPDLYTFTLISNGQSMSFSPD-SGPVWAARRR------LAQNGLKSFSIAS 122
Query: 154 KWVLEILLDRFKSQSKTGDDPVSVVD-------HFQ------YAMFCLLVLMCFGDKLDH 200
+ SK + +S + HF ++ ++ +CFG + DH
Sbjct: 123 DPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDH 182
Query: 201 NQIKEIKNIHHSRLLA--FSRFRILNFWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRA 258
N + + ++ + +F P +LR L KD +
Sbjct: 183 NHQELLSLVNLNNNFGEVVGSGNPADFIP-----ILRYLPNPSLNAFKDLNEKFYSFM-- 235
Query: 259 RKKMKEERLMNKGKENVLCYVDTLLD----LQLPXXXXXXXXXXXXIVALCSEFLNAGTD 314
+KM +E K ++ D+L++ QL I+ + + AG D
Sbjct: 236 -QKMVKEHYKTFEKGHIRDITDSLIEHCQEKQL-DENANVQLSDEKIINIVLDLFGAGFD 293
Query: 315 TTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRR 374
T +T + W + LV P VQ K+ D + +PY++A ILE R
Sbjct: 294 TVTTAISWSLMYLVMNPRVQRKI--QEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRH 351
Query: 375 HPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESG 434
F +PH+ T D +L G IPK V ++ D K+W +P F PERF+ +
Sbjct: 352 SSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGA 411
Query: 435 GRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEV 494
+ E K++ FG+G+R C G +A + F+A L+ E+ G +V
Sbjct: 412 IDKVLSE----------KVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKV 461
Query: 495 DFS 497
D +
Sbjct: 462 DMT 464
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 198/464 (42%), Gaps = 40/464 (8%)
Query: 33 LPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKA 92
LPPGP PVIGN+ L+ + ++ L +L GP+ TL G ++ + + + +A
Sbjct: 12 LPPGPTPLPVIGNI--LQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEA 69
Query: 93 LVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHA 152
L+ G F+ R P+ + A+ + S G W+ +RR LR++
Sbjct: 70 LIDLGEEFSGRGH-FPLAERANRGFGIVFSN--GKRWKEIRR------FSLMTLRNFGMG 120
Query: 153 RKWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHNQIKE 205
++ + + L++ + + DP ++ + C ++ D D +
Sbjct: 121 KRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFLNL 180
Query: 206 IKNIHHS-RLLAFSRFRILNFWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMKE 264
++ ++ + R+++ +I N +P + +LLK+ + ++ K+ +E
Sbjct: 181 MEKLNENIRIVSTPWIQICNNFPTIIDYF----PGTHNKLLKNLAFMESDILEKVKEHQE 236
Query: 265 ERLMNKGKENVLCYVDTLLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTTSTTLQWIM 324
+N ++ + C+ L+ ++ +V ++ L AGT+TTSTTL++ +
Sbjct: 237 SMDINNPRDFIDCF---LIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYAL 293
Query: 325 ANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHPPGHFVLPH 384
L+K+P V K+ D MPY AV+ E R LPH
Sbjct: 294 LLLLKHPEVTAKV--QEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPH 351
Query: 385 AVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLD 444
AVT D ++IPK ++ + + D K + +P F P F+ DE G
Sbjct: 352 AVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFL-DEGGNF-------- 402
Query: 445 ITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKA 488
+ MPF G+RIC G GLA + L F+ ++ F K+
Sbjct: 403 ---KKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQNFNLKS 443
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 199/486 (40%), Gaps = 58/486 (11%)
Query: 29 SKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSL 88
SK LPPGP P+IGNL L L I L + GP+ TL +GS+ ++ + +
Sbjct: 7 SKGKLPPGPFPLPIIGNLFQL--ELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKA 64
Query: 89 AYKALVQNGAVFADRPQALPINKIASSNQHNISSAFY--GPTWRVLRR-NLTAEIMHPSR 145
+AL+ F+ R + + + H + GPTW+ +RR +LT
Sbjct: 65 VKEALLDYKDEFSGR------GDLPAFHAHRDRGIIFNNGPTWKDIRRFSLTT------- 111
Query: 146 LRSYSHARKW-------VLEILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKL 198
LR+Y ++ LL+ + DP ++ A ++ + F
Sbjct: 112 LRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIG---CAPCNVIADILFRKHF 168
Query: 199 DHNQIKEIKNIHHSRLLAFSRFRILNF-WPRLTKIVLRKKWAQFLQLLKDQENLLVPLIR 257
D+N K ++ ++ L F +L+ W + L + FL L ++ +
Sbjct: 169 DYNDEKFLRLMY----LFNENFHLLSTPW-----LQLYNNFPSFLHYLPGSHRKVIKNVA 219
Query: 258 ARKKMKEERLMNKGKE-NVLCYVDT----LLDLQLPXXXXXXXXXXXXIVALCSEFLNAG 312
K+ ER+ + + C D L++++ I ++ AG
Sbjct: 220 EVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAG 279
Query: 313 TDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGL 372
T+TTSTTL++ + L+KYP ++EKL+ D +MPY+ AV+ E
Sbjct: 280 TETTSTTLRYGLLILMKYPEIEEKLHE--EIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQ 337
Query: 373 RRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDE 432
R LPH T D G++IPK V + + D + + DP FKPE F+ +
Sbjct: 338 RFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNEN 397
Query: 433 SGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKA-ADG 491
+ + PF G+R+C G GLA + L + ++ F K D
Sbjct: 398 GKFKYSDY------------FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDP 445
Query: 492 YEVDFS 497
++D S
Sbjct: 446 KDIDLS 451
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 198/463 (42%), Gaps = 40/463 (8%)
Query: 34 PPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKAL 93
PPGP PVIGN+ L+ + +I L +L GP+ TL G +PI+ + + +AL
Sbjct: 11 PPGPTPLPVIGNI--LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEAL 68
Query: 94 VQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHAR 153
+ G F+ R P+ + A+ + S G W+ +RR +M LR++ +
Sbjct: 69 IDLGEEFSGR-GIFPLAERANRGFGIVFSN--GKKWKEIRR---FSLM---TLRNFGMGK 119
Query: 154 KWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHNQIKEI 206
+ + + L++ + + DP ++ + C ++ D D + +
Sbjct: 120 RSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLM 179
Query: 207 KNIHHS-RLLAFSRFRILNFWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMKEE 265
+ ++ + +L+ ++ N +P L L +LLK+ + ++ K+ +E
Sbjct: 180 EKLNENIEILSSPWIQVYNNFPAL----LDYFPGTHNKLLKNVAFMKSYILEKVKEHQES 235
Query: 266 RLMNKGKENVLCYVDTLLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTTSTTLQWIMA 325
MN ++ + C+ L+ ++ + + AGT+TTSTTL++ +
Sbjct: 236 MDMNNPQDFIDCF---LMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALL 292
Query: 326 NLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHPPGHFVLPHA 385
L+K+P V K+ D + MPY AV+ E R LPHA
Sbjct: 293 LLLKHPEVTAKV--QEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHA 350
Query: 386 VTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDI 445
VT D ++IPK ++ + + D K + +P F P F+ DE G
Sbjct: 351 VTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL-DEGGNF--------- 400
Query: 446 TGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKA 488
+ MPF G+RIC G LA + L F+ +++ F K+
Sbjct: 401 --KKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKS 441
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 200/465 (43%), Gaps = 42/465 (9%)
Query: 33 LPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKA 92
LPPGP PVIGN+ L+ + +I L +L GP+ TL G +PI+ + + +A
Sbjct: 12 LPPGPTPLPVIGNI--LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEA 69
Query: 93 LVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHA 152
L+ G F+ R P+ + A+ + S G W+ +RR +M LR++
Sbjct: 70 LIDLGEEFSGR-GIFPLAERANRGFGIVFSN--GKKWKEIRR---FSLM---TLRNFGMG 120
Query: 153 RKWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHNQIKE 205
++ + + L++ + + DP ++ + C ++ D D +
Sbjct: 121 KRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNL 180
Query: 206 IKNIHHS-RLLAFSRFRILN-FWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMK 263
++ ++ + ++L+ +I N F P ++ +LLK+ + ++ K+ +
Sbjct: 181 MEKLNENIKILSSPWIQICNNFSP-----IIDYFPGTHNKLLKNVAFMKSYILEKVKEHQ 235
Query: 264 EERLMNKGKENVLCYVDTLLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTTSTTLQWI 323
E MN ++ + C+ L+ ++ + + AGT+TTSTTL++
Sbjct: 236 ESMDMNNPQDFIDCF---LMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYA 292
Query: 324 MANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHPPGHFVLP 383
+ L+K+P V K+ D + MPY AV+ E R LP
Sbjct: 293 LLLLLKHPEVTAKV--QEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLP 350
Query: 384 HAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDL 443
HAVT D ++IPK ++ + + D K + +P F P F+ DE G
Sbjct: 351 HAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL-DEGGNF------- 402
Query: 444 DITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKA 488
+ MPF G+RIC G LA + L F+ +++ F K+
Sbjct: 403 ----KKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKS 443
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 203/477 (42%), Gaps = 43/477 (9%)
Query: 28 KSKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHS 87
K+ P ++ P++G+L +L + + L K GPI ++R+G++ + + H
Sbjct: 4 KTGAKYPKSLLSLPLVGSLPFLPRH-GHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQ 62
Query: 88 LAYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIM----HP 143
LA + L++ G F+ RPQ ++ IAS+N+ I+ A G W++ RR A
Sbjct: 63 LAKEVLIKKGKDFSGRPQMATLD-IASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGD 121
Query: 144 SRLRSYSHARKWVLEILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHN-- 201
+L L +L QS PV V A+ ++ L+CF +
Sbjct: 122 QKLEKIICQEISTLCDMLATHNGQSIDISFPVFV------AVTNVISLICFNTSYKNGDP 175
Query: 202 QIKEIKNIHHSRLLAFSRFRILNFWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRA-RK 260
++ I+N + + S+ +++ P L KI K + +K + +LL ++ ++
Sbjct: 176 ELNVIQNYNEGIIDNLSKDSLVDLVPWL-KIFPNKTLEKLKSHVKIRNDLLNKILENYKE 234
Query: 261 KMKEERLMNKGKENVLCYVDTLLDLQLPXX-------XXXXXXXXXXIVALCSEFLNAGT 313
K + + + N +DTL+ ++ I+ + AG
Sbjct: 235 KFRSDSITN--------MLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGV 286
Query: 314 DTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLR 373
+TT++ ++W +A L+ P V++KLY D N++ L+A I E LR
Sbjct: 287 ETTTSVVKWTLAFLLHNPQVKKKLY--EEIDQNVGFSRTPTISDRNRLLLLEATIREVLR 344
Query: 374 RHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDES 433
P ++PH D ++ + K V + + + K W P F PERF+ + +
Sbjct: 345 LRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFL-NPA 403
Query: 434 GGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAAD 490
G ++ S + +PFG G R C G LA L +A L+ F+ + D
Sbjct: 404 GTQLI---------SPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPD 451
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 188/457 (41%), Gaps = 56/457 (12%)
Query: 42 VIGNLHWLRKSLTEIEPV-LRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKALVQNGAVF 100
V G LH L+ +L P+ L L KLGP+ LR+G + ++ + +A+++ F
Sbjct: 34 VPGFLHLLQPNL----PIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDF 89
Query: 101 ADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHARKWVLEIL 160
A RPQ +P K+ S +IS Y W+ ++ + ++ L + S WV ++
Sbjct: 90 AGRPQ-IPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALL----LGTRSSMEPWVDQLT 144
Query: 161 LDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLD------HNQIKEI-KNIHHSR 213
+ + PV++ F ++ + FG+K D H+ ++++ K H
Sbjct: 145 QEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWS 204
Query: 214 LLAFSRFRILNFWP-----RLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMKEERLM 268
+ L F+P RL + + + QL + +E+++ R M + L
Sbjct: 205 IQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWR---DMTDYMLQ 261
Query: 269 NKGKENVLCYVDTLLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLV 328
G++ V LL+ + + GT+TT++TL W +A L+
Sbjct: 262 GVGRQRVEEGPGQLLE--------------GHVHMSVVDLFIGGTETTASTLSWAVAFLL 307
Query: 329 KYPHVQEKLYTXXXXXXX-XXXXXXXXXXDLNKMPYLKAVILEGLRRHPPGHFVLPHAVT 387
+P +Q +L D ++P L A I E LR P LPH T
Sbjct: 308 HHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTT 367
Query: 388 EDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITG 447
++ G+ IP+ V + D VWE P F+P+RF+ E G +
Sbjct: 368 RPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFL--EPGANPSA-------- 417
Query: 448 SREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCF 484
+ FG G R+C G LA L L +A L+ F
Sbjct: 418 ------LAFGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 199/485 (41%), Gaps = 60/485 (12%)
Query: 29 SKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSL 88
S PPGP A+P+IGN + ++ L + G + +R+GS PI+ +
Sbjct: 6 SSKGKPPGPFAWPLIGNAAAVGQA---AHLSFARLARRYGDVFQIRLGSCPIVVLNGERA 62
Query: 89 AYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRN--------LTAEI 140
++ALVQ G+ FADRP + S +++ Y W+V RR T +
Sbjct: 63 IHQALVQQGSAFADRPSFASFRVV--SGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQP 120
Query: 141 MHPSRLRSYSHARKWVLEILLDRFKSQSKTGD-DPVSVVDHFQYAMFCLLVLMCFGDKLD 199
L + + L LL R + D P++VV A+ ++ +CFG +
Sbjct: 121 RSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVV-----AVANVMSAVCFGCRYS 175
Query: 200 HN--QIKEI--KNIHHSRLLAFSRFRILNFWPRLTKIVLRKKWAQFLQLLKDQENLLV-- 253
H+ + +E+ N R + + W + +R + +F QL ++ N ++
Sbjct: 176 HDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDK 235
Query: 254 ---------PLIRARKKMKEERLMNKGKENVLCYVDTL-LDLQLPXXXXXXXXXXXXIVA 303
P R M L + K + LDL+ + A
Sbjct: 236 FLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLE-------------NVPA 282
Query: 304 LCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPY 363
++ A DT ST LQW++ +YP VQ ++ D +PY
Sbjct: 283 TITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMG--DQPNLPY 340
Query: 364 LKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAF 423
+ A + E +R +PHA T + ++ G+ IPKD V + DP W +P F
Sbjct: 341 VLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENF 400
Query: 424 KPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWC 483
P RF+ D+ G + + D+T ++M F VG+R C G L+ + L F++ L
Sbjct: 401 DPARFL-DKDG-----LINKDLTS----RVMIFSVGKRRCIGEELSKMQLFLFISILAHQ 450
Query: 484 FEWKA 488
+++A
Sbjct: 451 CDFRA 455
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 201/494 (40%), Gaps = 50/494 (10%)
Query: 29 SKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSL 88
SK LPPGP P IGN +L+ + ++ L + + GP+ T+ +G R ++ + H
Sbjct: 7 SKGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 89 AYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRS 148
+ALV F+ R + + + S+ G + LRR A LR
Sbjct: 65 VREALVDQAEEFSGRGEQATFDWVFKGYGVVFSN---GERAKQLRRFSIAT------LRD 115
Query: 149 YSHARKWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHN 201
+ ++ + E L+D + DP + + ++ + FGD+ D+
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSR---TVSNVISSIVFGDRFDYK 172
Query: 202 QIKEIKNIHHSRL--LAFSRFRILNFWPRLTKIV--LRKKWAQFLQLLKDQENLLVPLIR 257
KE ++ L F+ + + ++ L Q QLL+ E+ +
Sbjct: 173 D-KEFLSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFI----- 226
Query: 258 ARKKMKEERLMNKGKENVLCYVDT-LLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTT 316
A+K +R ++ ++D+ L+ +Q +V AGT+T
Sbjct: 227 AKKVEHNQRTLDPNSPR--DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETV 284
Query: 317 STTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHP 376
STTL++ L+K+P V+ K++ D KMPY++AVI E R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVH--EEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 377 PGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGR 436
L V +D +PK V M+ + RDP + +P F P+ F+ ++ +
Sbjct: 343 VIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK 402
Query: 437 VAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADG-YEVD 495
+ +PF +G+R C G GLA + L F ++ F K++ ++D
Sbjct: 403 ------------KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
Query: 496 FSEKQ-EFTTVMKN 508
S K F T+ +N
Sbjct: 451 VSPKHVGFATIPRN 464
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 203/502 (40%), Gaps = 66/502 (13%)
Query: 29 SKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSL 88
SK LPPGP P IGN +L+ + ++ L + + GP+ T+ +G R ++ + H
Sbjct: 7 SKGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 89 AYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRS 148
+ALV F+ R + + + S+ G + LRR A LR
Sbjct: 65 VKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSN---GERAKQLRRFSIAT------LRG 115
Query: 149 YSHARKWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHN 201
+ ++ + E L+D + DP + + ++ + FGD+ D+
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTHGANIDPTFFLSR---TVSNVISSIVFGDRFDYE 172
Query: 202 QIKEIKNIHHSRLLAFSRFRILNFWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKK 261
L+ R + +F + T + + F ++K +L P +A K+
Sbjct: 173 D---------KEFLSLLRMMLGSF--QFTATSTGQLYEMFSSVMK---HLPGPQQQAFKE 218
Query: 262 MK--EERLMNKGKENVLC--------YVDT-LLDLQLPXXXXXXXXXXXXIVALCSEFLN 310
++ E+ + K + N ++D+ L+ +Q +V
Sbjct: 219 LQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFF 278
Query: 311 AGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILE 370
AGT+T STTL++ L+K+P V+ K++ D KMPY +AVI E
Sbjct: 279 AGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFE--DRAKMPYTEAVIHE 336
Query: 371 GLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR 430
R L H V +D +PK V M+ + RDP+ + +P F P+ F
Sbjct: 337 IQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHF-- 394
Query: 431 DESGGRVAVVEDLDITGS--REIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKA 488
LD G + +PF +G+R C G GLA + L F ++ F +K+
Sbjct: 395 ------------LDKKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKS 442
Query: 489 ADG-YEVDFSEKQ-EFTTVMKN 508
++D S K F T+ +N
Sbjct: 443 PQSPKDIDVSPKHVGFATIPRN 464
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 201/494 (40%), Gaps = 50/494 (10%)
Query: 29 SKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSL 88
SK LPPGP P IGN +L+ + ++ L + + GP+ T+ +G R ++ + H
Sbjct: 7 SKGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 89 AYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRS 148
+ALV F+ R + + + S+ G + LRR A LR
Sbjct: 65 VREALVDQAEEFSGRGEQATFDWVFKGYGVVFSN---GERAKQLRRFSIAT------LRD 115
Query: 149 YSHARKWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHN 201
+ ++ + E L+D + DP + + ++ + FGD+ D+
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSR---TVSNVISSIVFGDRFDYK 172
Query: 202 QIKEIKNIHHSRL--LAFSRFRILNFWPRLTKIV--LRKKWAQFLQLLKDQENLLVPLIR 257
KE ++ L F+ + + ++ L Q QLL+ E+ +
Sbjct: 173 D-KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFI----- 226
Query: 258 ARKKMKEERLMNKGKENVLCYVDT-LLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTT 316
A+K +R ++ ++D+ L+ +Q +V + GT+T
Sbjct: 227 AKKVEHNQRTLDPNSPR--DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETV 284
Query: 317 STTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHP 376
STTL++ L+K+P V+ K++ D KMPY++AVI E R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVH--EEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 377 PGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGR 436
L V +D +PK V M+ + RDP + +P F P+ F+ ++ +
Sbjct: 343 VIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK 402
Query: 437 VAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADG-YEVD 495
+ +PF +G+R C G GLA + L F ++ F K++ ++D
Sbjct: 403 ------------KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
Query: 496 FSEKQ-EFTTVMKN 508
S K F T+ +N
Sbjct: 451 VSPKHVGFATIPRN 464
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 201/494 (40%), Gaps = 50/494 (10%)
Query: 29 SKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSL 88
SK LPPGP P IGN +L+ + ++ L + + GP+ T+ +G R ++ + H
Sbjct: 7 SKGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 89 AYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRS 148
+ALV F+ R + + + S+ G + LRR A LR
Sbjct: 65 VREALVDQAEEFSGRGEQATFDWVFKGYGVVFSN---GERAKQLRRFSIAT------LRD 115
Query: 149 YSHARKWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHN 201
+ ++ + E L+D + DP + + ++ + FGD+ D+
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSR---TVSNVISSIVFGDRFDYK 172
Query: 202 QIKEIKNIHHSRL--LAFSRFRILNFWPRLTKIV--LRKKWAQFLQLLKDQENLLVPLIR 257
KE ++ L F+ + + ++ L Q QLL+ E+ +
Sbjct: 173 D-KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFI----- 226
Query: 258 ARKKMKEERLMNKGKENVLCYVDT-LLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTT 316
A+K +R ++ ++D+ L+ +Q +V + GT+T
Sbjct: 227 AKKVEHNQRTLDPNSPR--DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETV 284
Query: 317 STTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHP 376
STTL++ L+K+P V+ K++ D KMPY++AVI E R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVHE--EIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 377 PGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGR 436
L V +D +PK V M+ + RDP + +P F P+ F+ ++ +
Sbjct: 343 VIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK 402
Query: 437 VAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADG-YEVD 495
+ +PF +G+R C G GLA + L F ++ F K++ ++D
Sbjct: 403 ------------KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
Query: 496 FSEKQ-EFTTVMKN 508
S K F T+ +N
Sbjct: 451 VSPKHVGFATIPRN 464
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 200/494 (40%), Gaps = 50/494 (10%)
Query: 29 SKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSL 88
SK LPPGP P IGN +L+ + ++ L + + GP+ T+ +G R ++ + H
Sbjct: 7 SKGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 89 AYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRS 148
+ALV F+ R + + + S+ G + LRR A LR
Sbjct: 65 VREALVDQAEEFSGRGEQATFDWVFKGYGVVFSN---GERAKQLRRFSIAT------LRD 115
Query: 149 YSHARKWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHN 201
+ ++ + E L+D + DP + + ++ + FGD+ D+
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSR---TVSNVISSIVFGDRFDYK 172
Query: 202 QIKEIKNIHHSRL--LAFSRFRILNFWPRLTKIV--LRKKWAQFLQLLKDQENLLVPLIR 257
KE ++ L F+ + + ++ L Q QLL+ E+ +
Sbjct: 173 D-KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFI----- 226
Query: 258 ARKKMKEERLMNKGKENVLCYVDT-LLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTT 316
A+K +R ++ ++D+ L+ +Q +V GT+T
Sbjct: 227 AKKVEHNQRTLDPNSPR--DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETV 284
Query: 317 STTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHP 376
STTL++ L+K+P V+ K++ D KMPY++AVI E R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVH--EEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 377 PGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGR 436
L V +D +PK V M+ + RDP + +P F P+ F+ ++ +
Sbjct: 343 VIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK 402
Query: 437 VAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADG-YEVD 495
+ +PF +G+R C G GLA + L F ++ F K++ ++D
Sbjct: 403 ------------KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
Query: 496 FSEKQ-EFTTVMKN 508
S K F T+ +N
Sbjct: 451 VSPKHVGFATIPRN 464
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 200/494 (40%), Gaps = 50/494 (10%)
Query: 29 SKPNLPPGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSL 88
SK LPPGP P IGN +L+ + ++ L + + GP+ T+ +G R ++ + H
Sbjct: 7 SKGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 89 AYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRS 148
+ALV F+ R + + + S+ G + LRR A LR
Sbjct: 65 VREALVDQAEEFSGRGEQATFDWVFKGYGVVFSN---GERAKQLRRFSIAT------LRD 115
Query: 149 YSHARKWVLE-------ILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKLDHN 201
+ ++ + E L+D + DP + + ++ + FGD+ D+
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSR---TVSNVISSIVFGDRFDYK 172
Query: 202 QIKEIKNIHHSRL--LAFSRFRILNFWPRLTKIV--LRKKWAQFLQLLKDQENLLVPLIR 257
KE ++ L F+ + + ++ L Q Q L+ E+ +
Sbjct: 173 D-KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFI----- 226
Query: 258 ARKKMKEERLMNKGKENVLCYVDT-LLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTT 316
A+K +R ++ ++D+ L+ +Q +V + GT+T
Sbjct: 227 AKKVEHNQRTLDPNSPR--DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETV 284
Query: 317 STTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHP 376
STTL++ L+K+P V+ K++ D KMPY++AVI E R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVH--EEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGD 342
Query: 377 PGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGR 436
L V +D +PK V M+ + RDP + +P F P+ F+ ++ +
Sbjct: 343 VIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK 402
Query: 437 VAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADG-YEVD 495
+ +PF +G+R C G GLA + L F ++ F K++ ++D
Sbjct: 403 ------------KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDID 450
Query: 496 FSEKQ-EFTTVMKN 508
S K F T+ +N
Sbjct: 451 VSPKHVGFATIPRN 464
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 196/466 (42%), Gaps = 37/466 (7%)
Query: 35 PGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKALV 94
PGP P +GN+ K + + H K G + G +P++ I D + LV
Sbjct: 18 PGPTPLPFLGNILSYHKGFCMFD---MECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLV 74
Query: 95 QNG-AVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHAR 153
+ +VF +R P+ + S+ IS A W+ LR +L + +L+
Sbjct: 75 KECYSVFTNRRPFGPVGFMKSA----ISIA-EDEEWKRLR-SLLSPTFTSGKLKEMVPII 128
Query: 154 KWVLEILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFG---DKLDHNQIKEIKNIH 210
++L+ + +++TG PV++ D F ++ FG D L++ Q ++N
Sbjct: 129 AQYGDVLVRNLRREAETGK-PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENT- 186
Query: 211 HSRLLAFSRFRILN-FWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMKEERLMN 269
+LL RF L+ F+ +T + L + + L ++ K+MKE RL +
Sbjct: 187 -KKLL---RFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLED 242
Query: 270 KGKENVLCYVDTLLDLQLPXXXXX-XXXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLV 328
K V ++ ++D Q +VA F+ AG +TTS+ L +IM L
Sbjct: 243 TQKHRV-DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELA 301
Query: 329 KYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHPPGHFVLPHAVTE 388
+P VQ+KL + +M YL V+ E LR P L +
Sbjct: 302 THPDVQQKL--QEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKK 358
Query: 389 DFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGS 448
D ++G IPK V + RDPK W +P F PERF + +++D
Sbjct: 359 DVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK-------DNID---- 407
Query: 449 REIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEV 494
PFG G R C G+ A+++++ + ++ F +K ++
Sbjct: 408 -PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQI 452
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 196/466 (42%), Gaps = 37/466 (7%)
Query: 35 PGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKALV 94
PGP P +GN+ K + + H K G + G +P++ I D + LV
Sbjct: 17 PGPTPLPFLGNILSYHKGFCMFD---MECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLV 73
Query: 95 QNG-AVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHAR 153
+ +VF +R P+ + S+ IS A W+ LR +L + +L+
Sbjct: 74 KECYSVFTNRRPFGPVGFMKSA----ISIA-EDEEWKRLR-SLLSPTFTSGKLKEMVPII 127
Query: 154 KWVLEILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFG---DKLDHNQIKEIKNIH 210
++L+ + +++TG PV++ D F ++ FG D L++ Q ++N
Sbjct: 128 AQYGDVLVRNLRREAETGK-PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENT- 185
Query: 211 HSRLLAFSRFRILN-FWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMKEERLMN 269
+LL RF L+ F+ +T + L + + L ++ K+MKE RL +
Sbjct: 186 -KKLL---RFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLED 241
Query: 270 KGKENVLCYVDTLLDLQLPXXXXX-XXXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLV 328
K V ++ ++D Q +VA F+ AG +TTS+ L +IM L
Sbjct: 242 TQKHRV-DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELA 300
Query: 329 KYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHPPGHFVLPHAVTE 388
+P VQ+KL + +M YL V+ E LR P L +
Sbjct: 301 THPDVQQKL--QEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKK 357
Query: 389 DFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGS 448
D ++G IPK V + RDPK W +P F PERF + +++D
Sbjct: 358 DVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK-------DNID---- 406
Query: 449 REIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEV 494
PFG G R C G+ A+++++ + ++ F +K ++
Sbjct: 407 -PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQI 451
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 196/466 (42%), Gaps = 37/466 (7%)
Query: 35 PGPVAFPVIGNLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKALV 94
PGP P +GN+ K + + H K G + G +P++ I D + LV
Sbjct: 19 PGPTPLPFLGNILSYHKGFCMFD---MECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLV 75
Query: 95 QNG-AVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHAR 153
+ +VF +R P+ + S+ IS A W+ LR +L + +L+
Sbjct: 76 KECYSVFTNRRPFGPVGFMKSA----ISIA-EDEEWKRLR-SLLSPTFTSGKLKEMVPII 129
Query: 154 KWVLEILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMCFG---DKLDHNQIKEIKNIH 210
++L+ + +++TG PV++ D F ++ FG D L++ Q ++N
Sbjct: 130 AQYGDVLVRNLRREAETGK-PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENT- 187
Query: 211 HSRLLAFSRFRILN-FWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMKEERLMN 269
+LL RF L+ F+ +T + L + + L ++ K+MKE RL +
Sbjct: 188 -KKLL---RFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLED 243
Query: 270 KGKENVLCYVDTLLDLQLPXXXXX-XXXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLV 328
K V ++ ++D Q +VA F+ AG +TTS+ L +IM L
Sbjct: 244 TQKHRV-DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELA 302
Query: 329 KYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHPPGHFVLPHAVTE 388
+P VQ+KL + +M YL V+ E LR P L +
Sbjct: 303 THPDVQQKL--QEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKK 359
Query: 389 DFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGS 448
D ++G IPK V + RDPK W +P F PERF + +++D
Sbjct: 360 DVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK-------DNID---- 408
Query: 449 REIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEV 494
PFG G R C G+ A+++++ + ++ F +K ++
Sbjct: 409 -PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQI 453
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 181/434 (41%), Gaps = 44/434 (10%)
Query: 66 KLGPIVTLRIGSRPIIFIADHSLAYKALVQNGAVFADRPQALPINKIASSNQHNISSAFY 125
K G + T+ +G RP++ + +ALV F+ R + ++ ++
Sbjct: 42 KYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFAN--- 98
Query: 126 GPTWRVLRRNLTAEIMHPSRLRSYSHARKWVLE-------ILLDRFKSQSKTGDDPVSVV 178
G W+VLRR + +R + ++ V E L++ + DP +
Sbjct: 99 GNRWKVLRR------FSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLF 152
Query: 179 DHFQYAMFCLLVLMCFGDKLDHNQIKEIKNIHHSRLLAFSRFRILN-FWPRLTKIV---L 234
+ C +V FG + + + +K ++ L + F +++ + +L ++ L
Sbjct: 153 QSITANIICSIV---FGKRFHYQDQEFLKMLN----LFYQTFSLISSVFGQLFELFSGFL 205
Query: 235 RKKWAQFLQLLKDQENLLVPLIRARKKMKEERLMNKGKENVLCYVDTLLDLQLPXXXXXX 294
+ Q+ K+ + + + + +K +E + ++ + Y LL ++
Sbjct: 206 KHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTY---LLHMEKEKSNAHS 262
Query: 295 XXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXX 354
+ AGT+TTSTTL++ ++KYPHV E++Y
Sbjct: 263 EFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVY--REIEQVIGPHRPPE 320
Query: 355 XXDLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDP 414
D KMPY +AVI E R +PH VT+ + G++IPKD V +++ DP
Sbjct: 321 LHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDP 380
Query: 415 KVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLE 474
+E P AF P+ F+ ++ G + E +PF +G+RIC G G+A L
Sbjct: 381 HYFEKPDAFNPDHFL--DANGALKKTE----------AFIPFSLGKRICLGEGIARAELF 428
Query: 475 YFVANLVWCFEWKA 488
F ++ F +
Sbjct: 429 LFFTTILQNFSMAS 442
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
I+ + S F AGT+TTSTTL++ ++KYPHV E++ D K
Sbjct: 270 ILTVLSLFF-AGTETTSTTLRYGFLLMLKYPHVTERV--QKEIEQVIGSHRPPALDDRAK 326
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
MPY AVI E R F +PH VT+D G+VIPK+ V +++ DP+ +E P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGS--REIKMMPFGVGRRICPGLGLAMLHLEYFVA 478
F P F LD G+ R MPF +G+RIC G G+A L F
Sbjct: 387 NTFNPGHF--------------LDANGALKRNEGFMPFSLGKRICAGEGIARTELFLFFT 432
Query: 479 NLVWCF 484
++ F
Sbjct: 433 TILQNF 438
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 29 SKPNLPPGPVAFPVIGNLHWL-RKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHS 87
SK LPPGP PV+GNL + RK L + LR L K G + T+ +GSRP++ +
Sbjct: 7 SKGKLPPGPSPLPVLGNLLQMDRKGL--LRSFLR-LREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 88 LAYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRR 134
+ALV F+ R + ++ I ++ G WR LRR
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN---GERWRALRR 107
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
I+ + S F AGT+TTSTTL++ ++KYPHV E++ D K
Sbjct: 270 ILTVLSLFF-AGTETTSTTLRYGFLLMLKYPHVTERV--QKEIEQVIGSHRPPALDDRAK 326
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
MPY AVI E R F +PH VT+D G+VIPK+ V +++ DP+ +E P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGS--REIKMMPFGVGRRICPGLGLAMLHLEYFVA 478
F P F LD G+ R MPF +G+RIC G G+A L F
Sbjct: 387 NTFNPGHF--------------LDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFT 432
Query: 479 NLVWCF 484
++ F
Sbjct: 433 TILQNF 438
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 29 SKPNLPPGPVAFPVIGNLHWL-RKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHS 87
SK LPPGP PV+GNL + RK L + LR L K G + T+ +GSRP++ +
Sbjct: 7 SKGKLPPGPSPLPVLGNLLQMDRKGL--LRSFLR-LREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 88 LAYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRR 134
+ALV F+ R + ++ I ++ G WR LRR
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN---GERWRALRR 107
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
I+ + S F AGT+TTSTTL++ ++KYPHV E++ D K
Sbjct: 270 ILTVLSLFF-AGTETTSTTLRYGFLLMLKYPHVTERV--QKEIEQVIGSHRPPALDDRAK 326
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
MPY AVI E R F +PH VT+D G+VIPK+ V +++ DP+ +E P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGS--REIKMMPFGVGRRICPGLGLAMLHLEYFVA 478
F P F LD G+ R MPF +G+RIC G G+A L F
Sbjct: 387 NTFNPGHF--------------LDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFT 432
Query: 479 NLVWCF 484
++ F
Sbjct: 433 TILQNF 438
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 29 SKPNLPPGPVAFPVIGNLHWL-RKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHS 87
SK LPPGP PV+GNL + RK L + LR L K G + T+ +GSRP++ +
Sbjct: 7 SKGKLPPGPSPLPVLGNLLQMDRKGL--LRSFLR-LREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 88 LAYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRR 134
+ALV F+ R + ++ I ++ G WR LRR
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN---GERWRALRR 107
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
I+ + S F AGT+TTSTTL++ ++KYPHV E++ D K
Sbjct: 270 ILTVLSLFF-AGTETTSTTLRYGFLLMLKYPHVTERV--QKEIEQVIGSHRPPALDDRAK 326
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
MPY AVI E R F +PH VT+D G+VIPK+ V +++ DP+ +E P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGS--REIKMMPFGVGRRICPGLGLAMLHLEYFVA 478
F P F LD G+ R MPF +G+RIC G G+A L F
Sbjct: 387 NTFNPGHF--------------LDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFT 432
Query: 479 NLVWCF 484
++ F
Sbjct: 433 TILQNF 438
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 29 SKPNLPPGPVAFPVIGNLHWL-RKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHS 87
SK LPPGP PV+GNL + RK L + LR L K G + T+ +GSRP++ +
Sbjct: 7 SKGKLPPGPSPLPVLGNLLQMDRKGL--LRSFLR-LREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 88 LAYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRR 134
+ALV F+ R + ++ I ++ G WR LRR
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN---GERWRALRR 107
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 311 AGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILE 370
AGT+TTSTTL++ ++KYPHV E++ D KMPY AVI E
Sbjct: 279 AGTETTSTTLRYGFLLMLKYPHVTERV--QKEIEQVIGSHRPPALDDRAKMPYTDAVIHE 336
Query: 371 GLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR 430
R F +PH VT+D G+VIPK+ V +++ DP+ +E P F P F
Sbjct: 337 IQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF-- 394
Query: 431 DESGGRVAVVEDLDITGS--REIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCF 484
LD G+ R MPF +G+RIC G G+A L F ++ F
Sbjct: 395 ------------LDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 29 SKPNLPPGPVAFPVIGNLHWL-RKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHS 87
SK LPPGP PV+GNL + RK L + LR L K G + T+ +GSRP++ +
Sbjct: 7 SKGKLPPGPSPLPVLGNLLQMDRKGL--LRSFLR-LREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 88 LAYKALVQNGAVFADRPQALPINKIASSNQHNISSAFYGPTWRVLRR 134
+ALV F+ R + ++ I ++ G WR LRR
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFAN---GERWRALRR 107
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 176/444 (39%), Gaps = 48/444 (10%)
Query: 63 LHSKLGPIVTLRIGSRPIIFIADHSLAYKALVQNGAVFADRPQALPINKIAS--SNQHNI 120
L + G + +L++ P++ + + +ALV +G ADRP +PI +I +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRP-PVPITQILGFGPRSQGV 97
Query: 121 SSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHARK----WVLE---ILLDRFKSQSKTGDD 173
A YGP WR RR S LR+ +K WV E L F + S
Sbjct: 98 FLARYGPAWREQRR------FSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFR 151
Query: 174 PVSVVDHFQYAMFCLLVLMCFGDKLDHNQIKEIK--NIHHSRLLAFSRF--RILNFWPRL 229
P ++D A+ ++ + G + +++ + ++ ++ L S F +LN P L
Sbjct: 152 PNGLLDK---AVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVL 208
Query: 230 TKI-VLRKKWAQFLQLLKDQENLLVPLIRARKKMKEERLMNKGKENVLCYVDTLL-DLQL 287
I L K +F + Q + L + E R+ + + L +++
Sbjct: 209 LHIPALAGKVLRFQKAFLTQLDEL---------LTEHRMTWDPAQPPRDLTEAFLAEMEK 259
Query: 288 PXXXXXXXXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXX 347
+ + ++ +AG TTSTTL W + ++ +P VQ ++
Sbjct: 260 AKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRV--QQEIDDVI 317
Query: 348 XXXXXXXXXDLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMV 407
D MPY AVI E R + H + D + G IPK ++ +
Sbjct: 318 GQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNL 377
Query: 408 AEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLG 467
+ + +D VWE P F PE F+ D G V + +PF GRR C G
Sbjct: 378 SSVLKDEAVWEKPFRFHPEHFL-DAQGHFV-----------KPEAFLPFSAGRRACLGEP 425
Query: 468 LAMLHLEYFVANLVWCFEWKAADG 491
LA + L F +L+ F + G
Sbjct: 426 LARMELFLFFTSLLQHFSFSVPTG 449
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 178/443 (40%), Gaps = 46/443 (10%)
Query: 63 LHSKLGPIVTLRIGSRPIIFIADHSLAYKALVQNGAVFADRPQALPINKIAS--SNQHNI 120
L + G + +L++ P++ + + +ALV +G ADRP +PI +I +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRP-PVPITQILGFGPRSQGV 97
Query: 121 SSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHARK----WVLE---ILLDRFKSQSKTGDD 173
A YGP WR RR S LR+ +K WV E L F + S
Sbjct: 98 FLARYGPAWREQRR------FSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFR 151
Query: 174 PVSVVDHFQYAMFCLLVLMCFGDKLDHNQIKEIK--NIHHSRLLAFSRF--RILNFWPRL 229
P ++D A+ ++ + G + +++ + ++ ++ L S F +LN P
Sbjct: 152 PNGLLDK---AVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVP-- 206
Query: 230 TKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMKEERLMNKGKENVLCYVDTLL-DLQLP 288
V R A ++L+ Q+ L L + + E R+ + + L +++
Sbjct: 207 ---VDRHIPALAGKVLRFQKAFLTQL---DELLTEHRMTWDPAQPPRDLTEAFLAEMEKA 260
Query: 289 XXXXXXXXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXX 348
+ + ++ +AG TTSTTL W + ++ +P VQ ++
Sbjct: 261 KGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRV--QQEIDDVIG 318
Query: 349 XXXXXXXXDLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVA 408
D MPY AVI E R + H + D + G IPK ++ ++
Sbjct: 319 QVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLS 378
Query: 409 EMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGL 468
+ +D VWE P F PE F+ D G V + +PF GRR C G L
Sbjct: 379 SVLKDEAVWEKPFRFHPEHFL-DAQGHFV-----------KPEAFLPFSAGRRACLGEPL 426
Query: 469 AMLHLEYFVANLVWCFEWKAADG 491
A + L F +L+ F + G
Sbjct: 427 ARMELFLFFTSLLQHFSFSVPTG 449
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 184/453 (40%), Gaps = 47/453 (10%)
Query: 45 NLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKALVQNGAVFADRP 104
N++ L S +R G I +L +G + + + + + LV +FADRP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 105 QALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHARKWVLEILLDRF 164
LP+ + + + ++ YG W RR + + R + + +K +L+
Sbjct: 85 -CLPLF-MKMTKMGGLLNSRYGRGWVDHRR------LAVNSFRYFGYGQKSFESKILEET 136
Query: 165 K----SQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKL-----DHNQIKEIKNIHHSRLL 215
K + P A+ + L+ FG++ D + E+ + + L
Sbjct: 137 KFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFS-ENVELA 195
Query: 216 AFSRFRILNFWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMKEERLMNKGKENV 275
A + + N +P + + K QL ++ + L R + E+ +N+ +
Sbjct: 196 ASASVFLYNAFPWIGILPFGKHQ----QLFRNAAVVYDFLSR----LIEKASVNRKPQLP 247
Query: 276 LCYVDTLLD-LQLPXXXXXXXXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQ 334
+VD LD + ++ E + AGT+TT+ L+W + + YP++Q
Sbjct: 248 QHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQ 307
Query: 335 EKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRH---PPGHFVLPHAVTEDFT 391
++ D KMPY +AV+ E LR P G F HA +ED
Sbjct: 308 GQV--QKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIF---HATSEDAV 362
Query: 392 LDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREI 451
+ G+ IPK +V + + D K W DP F PERF+ +S G A E L
Sbjct: 363 VRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFL--DSSGYFAKKEAL-------- 412
Query: 452 KMMPFGVGRRICPGLGLAMLHLEYFVANLVWCF 484
+PF +GRR C G LA + + F L+ F
Sbjct: 413 --VPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 184/453 (40%), Gaps = 47/453 (10%)
Query: 45 NLHWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKALVQNGAVFADRP 104
N++ L S +R G I +L +G + + + + + LV +FADRP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 105 QALPINKIASSNQHNISSAFYGPTWRVLRRNLTAEIMHPSRLRSYSHARKWVLEILLDRF 164
LP+ + + + ++ YG W RR + + R + + +K +L+
Sbjct: 85 -CLPLF-MKMTKMGGLLNSRYGRGWVDHRR------LAVNSFRYFGYGQKSFESKILEET 136
Query: 165 K----SQSKTGDDPVSVVDHFQYAMFCLLVLMCFGDKL-----DHNQIKEIKNIHHSRLL 215
K + P A+ + L+ FG++ D + E+ + + L
Sbjct: 137 KFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFS-ENVELA 195
Query: 216 AFSRFRILNFWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMKEERLMNKGKENV 275
A + + N +P + + K QL ++ + L R + E+ +N+ +
Sbjct: 196 ASASVFLYNAFPWIGILPFGKHQ----QLFRNAAVVYDFLSR----LIEKASVNRKPQLP 247
Query: 276 LCYVDTLLD-LQLPXXXXXXXXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQ 334
+VD LD + ++ E + AGT+TT+ L+W + + YP++Q
Sbjct: 248 QHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQ 307
Query: 335 EKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRH---PPGHFVLPHAVTEDFT 391
++ D KMPY +AV+ E LR P G F HA +ED
Sbjct: 308 GQV--QKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIF---HATSEDAV 362
Query: 392 LDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREI 451
+ G+ IPK +V + + D K W DP F PERF+ +S G A E L
Sbjct: 363 VRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFL--DSSGYFAKKEAL-------- 412
Query: 452 KMMPFGVGRRICPGLGLAMLHLEYFVANLVWCF 484
+PF +GRR C G LA + + F L+ F
Sbjct: 413 --VPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 175/476 (36%), Gaps = 53/476 (11%)
Query: 35 PGPVAFPVIGNL---HWLRKSLTEIEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYK 91
PGP +P++G+L W + L + L + H K G I +++GS + + SL +
Sbjct: 27 PGPTNWPLLGSLLEIFW-KGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSL-LE 84
Query: 92 ALVQNGAVFADRPQALPINKIASSNQHNISS----AFYGPTWRVLRRNLTAEIMHPSRLR 147
AL + + PQ L I + H + G W+ +R ++M P +
Sbjct: 85 ALYRTESA---HPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIM 141
Query: 148 SYSHARKWVLEILLDRFKSQSKTGD------DPVSVVDHFQYAMFCLLVLMCFGDKLDHN 201
K + E+L D + + D D S ++ + + CL++ L
Sbjct: 142 KLD---KKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKE 198
Query: 202 QIKEIKNIHHSRLLAFSRFRILNFWP-RLTKIVLRKKWAQFLQLLKDQENLLVPLIRARK 260
+E + S F + P L K + K W + P I R
Sbjct: 199 TEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRL 258
Query: 261 KMKEERLMNKGKENVLCYVDTLLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTTSTTL 320
+R + + LC + + A +E A +TT+ +L
Sbjct: 259 ----QRYSQQPGADFLCDI-----------YQQDHLSKKELYAAVTELQLAAVETTANSL 303
Query: 321 QWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILEGLRRHPPGHF 380
WI+ NL + P Q +L DL MPYLKA + E +R P F
Sbjct: 304 MWILYNLSRNPQAQRRLL--QEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPF 361
Query: 381 VLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVV 440
+ + L + +PK + +G +ED F+PER+++ E
Sbjct: 362 TT-RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEK------- 413
Query: 441 EDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWKAADGYEVDF 496
+PFG+G+R+C G LA L L + ++ ++ A D V+
Sbjct: 414 ------KINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEM 463
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
I A +E L G DTTS TLQW + + + VQ+ L L
Sbjct: 276 IKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQL-- 333
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
+P LKA I E LR HP L + D L ++IP V + +GR+P + DP
Sbjct: 334 VPLLKASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDP 392
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
F P R++ +D +IT R + FG G R C G +A L + F+ N+
Sbjct: 393 ENFDPTRWLS----------KDKNITYFRNLG---FGWGVRQCLGRRIAELEMTIFLINM 439
Query: 481 VWCF 484
+ F
Sbjct: 440 LENF 443
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
I A +E L G DTTS TLQW + + + VQ+ L L
Sbjct: 273 IKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQL-- 330
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
+P LKA I E LR HP L + D L ++IP V + +GR+P + DP
Sbjct: 331 VPLLKASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDP 389
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
F P R++ +D +IT R + FG G R C G +A L + F+ N+
Sbjct: 390 ENFDPTRWLS----------KDKNITYFRNLG---FGWGVRQCLGRRIAELEMTIFLINM 436
Query: 481 VWCF 484
+ F
Sbjct: 437 LENF 440
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 358 LNKMPYLKAVILEGLRRHPP--GHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPK 415
L KMPYL V+ E LR PP G F + +D G PK V++ +++ DP
Sbjct: 298 LKKMPYLDQVLQEVLRLIPPVGGGF---RELIQDCQFQGFHFPKGWLVSYQISQTHADPD 354
Query: 416 VWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEY 475
++ DP F PERF D S T + +PFG G R C G A L ++
Sbjct: 355 LYPDPEKFDPERFTPDGSA-----------THNPPFAHVPFGGGLRECLGKEFARLEMKL 403
Query: 476 FVANLVWCFEWKAADGYEVDF 496
F L+ F+W G ++
Sbjct: 404 FATRLIQQFDWTLLPGQNLEL 424
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 168/447 (37%), Gaps = 52/447 (11%)
Query: 65 SKLGPIVTLRIGSRPIIFIADHSLAYKALVQNGAVFADRPQALPINKIASSNQHNISSAF 124
K GPI ++G+ ++I H L + + +R P Q I F
Sbjct: 45 QKYGPIYREKLGNLESVYII-HPEDVAHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVLF 103
Query: 125 Y-GPTWRVLRRNLTAEIMHPSRLRSY----SHARKWVLEILLDRFKSQSKTGDDPVSVVD 179
TW+ R L E+M P ++++ + + + +L R K Q D
Sbjct: 104 KKSGTWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKED 163
Query: 180 HFQYAMFCLLVLMCFGDKLDHNQIKEIKNIHHSRLL--AFSRFR----ILNFWPRLTKIV 233
F +A + +M FG++L ++E N + + + F +LN P L ++
Sbjct: 164 LFHFAFESITNVM-FGERL--GMLEETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRLF 220
Query: 234 LRKKWAQFLQLLKDQENLLVPLIRARKKMKEERLMN-KGKENVLCYVDTLLDLQLPXXXX 292
K W +D + +K E + + K Y L L
Sbjct: 221 RTKTW-------RDHVAAWDTIFNKAEKYTEIFYQDLRRKTEFRNYPGILYCL-----LK 268
Query: 293 XXXXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXX 352
+ A +E L G +TTS TLQW + + + +VQE L
Sbjct: 269 SEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEML------REEVLNARR 322
Query: 353 XXXXDLNKM----PYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVA 408
D++KM P LKA I E LR HP L D L ++IP V +
Sbjct: 323 QAEGDISKMLQMVPLLKASIKETLRLHPIS-VTLQRYPESDLVLQDYLIPAKTLVQVAIY 381
Query: 409 EMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGL 468
MGRDP + P F P R++ +D D+ R + FG G R C G +
Sbjct: 382 AMGRDPAFFSSPDKFDPTRWLS----------KDKDLIHFRNLG---FGWGVRQCVGRRI 428
Query: 469 AMLHLEYFVANLVWCFEWKAADGYEVD 495
A L + F+ +++ F+ + +VD
Sbjct: 429 AELEMTLFLIHILENFKVEMQHIGDVD 455
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 23/212 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
F AG +T++ L + + L + P + +L DL ++ YL V
Sbjct: 251 FFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFE--DLGRLQYLSQV 308
Query: 368 ILEGLRRHPP--GHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKP 425
+ E LR +PP G F L + E+ +DG +P + + F MGR +EDP+ F P
Sbjct: 309 LKESLRLYPPAWGTFRL---LEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNP 365
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
+RF R PF +G R C G A + ++ +A L+ E
Sbjct: 366 DRFGPGAPKPR--------------FTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLE 411
Query: 486 WKAADGYEVDFSEKQEFTTVMKNPLRARISPR 517
++ G E+ + +P+ + PR
Sbjct: 412 FRLVPGQRFGLQEQATLKPL--DPVLCTLRPR 441
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 130/352 (36%), Gaps = 45/352 (12%)
Query: 126 GPTWRVLRRNLTAEIMHPSRLRSYSHARKWVLEILLDRFKS---QSKTGDDPVSVVDHFQ 182
GP WR R L +++ P ++ + V K Q+ G + V
Sbjct: 108 GPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLDVQPSIF 167
Query: 183 YAMFCLLVLMCFGDKLD---HNQIKEIKNIHHSRLLAFSRFRILNFWPR-LTKIVLRKKW 238
+ L FG++L H+ N H+ + F L F PR L++ + K W
Sbjct: 168 HYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWISPKVW 227
Query: 239 AQFLQ----LLKDQENLLVPLIRARKKMKEERLMNKGKENVLCYVDTLLDLQLPXXXXXX 294
+ + + + +N + +K+ +E N+ + + LL +L
Sbjct: 228 KEHFEAWDCIFQYGDNCI-------QKIYQELAFNRPQHYTGIVAELLLKAEL------- 273
Query: 295 XXXXXXIVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXX 354
I A E DTT+ L + L + P VQ+ L
Sbjct: 274 --SLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQK 331
Query: 355 XXDLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDP 414
++P L+A + E LR +P G F L V+ D L + IP V + +GR+
Sbjct: 332 AT--TELPLLRAALKETLRLYPVGLF-LERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNA 388
Query: 415 KVWEDPMAFKPERFVRDESGGRVAVVEDLDITGS-REIKMMPFGVGRRICPG 465
++ P + P+R+ LDI GS R +PFG G R C G
Sbjct: 389 ALFPRPERYNPQRW--------------LDIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
L G++T ++T+ W++ L +P +++ D+ K+ + V
Sbjct: 271 ILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFE---DVRKLRHTGNV 327
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPER 427
I+E +R P +VL + L G+ IP A + + + RDPK ++D + F P+R
Sbjct: 328 IVEAMRLRP-AVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDR 386
Query: 428 FVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWK 487
++ + R A V + M PF G+R CP +M L A L + ++
Sbjct: 387 WLPE----RAANVP--------KYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFE 434
Query: 488 AADG 491
G
Sbjct: 435 QVAG 438
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 357 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTL---DG-HVIPKDASVNFMVAEMGR 412
+LN +P L ++I E LR + EDFTL DG + I KD + M
Sbjct: 322 ELNDLPVLDSIIKESLRLSSASLNI--RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHL 379
Query: 413 DPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSR-EIKMMPFGVGRRICPGLGLAML 471
DP+++ DP+ FK +R++ DE+G G + + MPFG G ICPG A+
Sbjct: 380 DPEIYPDPLTFKYDRYL-DENGKTKTTFY---CNGLKLKYYYMPFGSGATICPGRLFAIH 435
Query: 472 HLEYFVANLVWCFEWKAADG 491
++ F+ ++ FE + +G
Sbjct: 436 EIKQFLILMLSYFELELIEG 455
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 357 DLNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTL---DG-HVIPKDASVNFMVAEMGR 412
+LN +P L ++I E LR + EDFTL DG + I KD + M
Sbjct: 322 ELNDLPVLDSIIKESLRLSSASLNI--RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHL 379
Query: 413 DPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSR-EIKMMPFGVGRRICPGLGLAML 471
DP+++ DP+ FK +R++ DE+G G + + MPFG G ICPG A+
Sbjct: 380 DPEIYPDPLTFKYDRYL-DENGKTKTTFY---CNGLKLKYYYMPFGSGATICPGRLFAIH 435
Query: 472 HLEYFVANLVWCFEWKAADG 491
++ F+ ++ FE + +G
Sbjct: 436 EIKQFLILMLSYFELELIEG 455
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 262 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 318
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPMA-FKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 319 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R CPG A+ + ++ F+
Sbjct: 378 ERFENPSAIPQHA--------------FKPFGNGQRACPGQQFALHEATLVLGMMLKHFD 423
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 424 FEDHTNYELDIKE 436
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K+ + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKV---AEEATRVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K V ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG + TS L + + LVK PHV +K + ++ Y+ V
Sbjct: 262 FLAAGHEATSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 318
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P G +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 319 LNEALRLWPTGPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 378 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 424 FEDHTNYELDIKE 436
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG + TS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLAAGHEATSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P G +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTGPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 267 FLIAGHETTSGLLSFTLYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 323
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 324 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRP 382
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 383 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 428
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 429 FEDHTNYELDIKE 441
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACEGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 18/194 (9%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
+ + L AG T+STT W+ L + +Q+K Y L
Sbjct: 253 VAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCY-LEQKTVCGENLPPLTYDQLKD 311
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
+ L I E LR PP ++ A T T+ G+ IP V R W +
Sbjct: 312 LNLLDRCIKETLRLRPPIMIMMRMARTPQ-TVAGYTIPPGHQVCVSPTVNQRLKDSWVER 370
Query: 421 MAFKPERFVRDE--SGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVA 478
+ F P+R+++D SG + A V PFG GR C G A + ++ +
Sbjct: 371 LDFNPDRYLQDNPASGEKFAYV--------------PFGAGRHRCIGENFAYVQIKTIWS 416
Query: 479 NLVWCFEWKAADGY 492
++ +E+ DGY
Sbjct: 417 TMLRLYEFDLIDGY 430
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 20/195 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG ++TS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHESTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPMA-FKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSEKQ 500
++ YE+D E Q
Sbjct: 423 FEDHTNYELDIKETQ 437
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 262 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 318
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 319 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 378 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 424 FEDHTNYELDIKE 436
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 262 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 318
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 319 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 378 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 424 FEDHTNYELDIKE 436
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGKQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 262 FLIAGHETTSGLLTFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 318
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD VW D + F+P
Sbjct: 319 LNEALRIWPTAPAFSLYA-KEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRP 377
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 378 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 424 FEDHTNYELDIEE 436
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 264 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 320
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 321 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 379
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 380 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 425
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 426 FEDHTNYELDIKE 438
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 264 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 320
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 321 LNEALRLWPTSPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 379
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 380 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 425
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 426 FEDHTNYELDIKE 438
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 262 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 318
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 319 LNEALRLWPTAPPFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 378 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 424 FEDHTNYELDIKE 436
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A P+G G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPYGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG ++TS L + + LVK PHV +K + ++ Y+ V
Sbjct: 262 FLIAGHESTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 318
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 319 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 378 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 424 FEDHTNYELDIKE 436
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG ++TS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHESTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 264 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 320
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 321 LNEALRLWPTVPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 379
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 380 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 425
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 426 FEDHTNYELDIKE 438
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL G +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLICGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG + TS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHENTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG + TS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHEATSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG + TS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHEATSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG + TS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHEATSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL G +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIEGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL G +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIQGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL G +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIKGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A P+G G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPWGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL G +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIMGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL G +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIHGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPMA-FKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 20/192 (10%)
Query: 309 LNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVI 368
L AG +TTS L + + LVK PHV +K + ++ Y+ V+
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMVL 318
Query: 369 LEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPMA-FKPE 426
E LR P +A ED L G + K + ++ ++ RD +W D + F+PE
Sbjct: 319 NEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 427 RFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEW 486
RF + + A PFG G+R C G A+ + ++ F++
Sbjct: 378 RFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 487 KAADGYEVDFSE 498
+ YE+D E
Sbjct: 424 EDHTNYELDIKE 435
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG + TS L + + LVK PH +L + ++ Y+ V
Sbjct: 262 FLAAGHEATSGLLSFALYFLVKNPH---ELQKAAEEAARVLVDPVPSHKQVKQLKYVGMV 318
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPMA-FKP 425
+ E LR P +A ED L G + + K + ++ ++ RD VW D + F+P
Sbjct: 319 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRP 377
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 378 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 424 FEDHTNYELDIKE 436
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 14/219 (6%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
I + + AG T+S T W + L++ H L +
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMR--HRDAYAAVIDELDELYGDGRSVSFHALRQ 303
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
+P L+ V+ E LR HPP +L +F + GH I + V A R P+ + DP
Sbjct: 304 IPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
F P R+ + EDL +PFG GR C G A++ ++ + L
Sbjct: 363 HDFVPARYEQPRQ-------EDL----LNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVL 411
Query: 481 VWCFEWKAADGYEVDFSEKQEFTTVMKNPLRARISPRIS 519
+ +E++ A E ++ + + P R R
Sbjct: 412 LREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRTG 450
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 14/219 (6%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
I + + AG T+S T W + L++ H L +
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMR--HRDAYAAVIDELDELYGDGRSVSFHALRQ 303
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
+P L+ V+ E LR HPP +L +F + GH I + V A R P+ + DP
Sbjct: 304 IPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
F P R+ + EDL +PFG GR C G A++ ++ + L
Sbjct: 363 HDFVPARYEQPRQ-------EDL----LNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVL 411
Query: 481 VWCFEWKAADGYEVDFSEKQEFTTVMKNPLRARISPRIS 519
+ +E++ A E ++ + + P R R
Sbjct: 412 LREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRTG 450
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDGHV-IPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A P G G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPHGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 14/219 (6%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
I + + AG T+S T W + L++ H L +
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMR--HRDAYAAVIDELDELYGDGRSVSFHALRQ 303
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
+P L+ V+ E LR HPP +L +F + GH I + V A R P+ + DP
Sbjct: 304 IPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
F P R+ + EDL +PFG GR C G A++ ++ + L
Sbjct: 363 HDFVPARYEQPRQ-------EDL----LNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVL 411
Query: 481 VWCFEWKAADGYEVDFSEKQEFTTVMKNPLRARISPRIS 519
+ +E++ A E ++ + + P R R
Sbjct: 412 LREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRTG 450
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG + TS L + + LVK PH +L + ++ Y+ V
Sbjct: 261 FLAAGHEATSGLLSFALYFLVKNPH---ELQKAAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPMA-FKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A PFG G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 308 FLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAV 367
FL AG +TTS L + + LVK PHV +K + ++ Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQK---AAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 368 ILEGLRRHPPGHFVLPHAVTEDFTLDG-HVIPKDASVNFMVAEMGRDPKVWEDPM-AFKP 425
+ E LR P +A ED L G + + K + ++ ++ RD +W D + F+P
Sbjct: 318 LNEALRLWPTAPAFSLYA-KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 426 ERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFE 485
ERF + + A P G G+R C G A+ + ++ F+
Sbjct: 377 ERFENPSAIPQHA--------------FKPAGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 486 WKAADGYEVDFSE 498
++ YE+D E
Sbjct: 423 FEDHTNYELDIKE 435
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 17/201 (8%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
I + + AG T+S T W + L++ H L +
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMR--HRDAYAAVIDELDELYGDGRSVSFHALRQ 303
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
+P L+ V+ E LR HPP +L +F + GH I + V A R P+ + DP
Sbjct: 304 IPQLENVLKETLRLHPP-LIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
F P R+ + EDL +PFG GR C G A++ ++ + L
Sbjct: 363 HDFVPARYEQPRQ-------EDL----LNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVL 411
Query: 481 VWCFEWKAA---DGYEVDFSE 498
+ +E++ A + Y D S+
Sbjct: 412 LREYEFEMAQPPESYRNDHSK 432
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 25/217 (11%)
Query: 307 EFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKA 366
E L A DT S +L +++ + K+P+V+E + D+ K+ ++
Sbjct: 302 EMLIAAPDTMSVSLFFMLFLIAKHPNVEEAI---IKEIQTVIGERDIKIDDIQKLKVMEN 358
Query: 367 VILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPE 426
I E +R P V+ A+ ED +DG+ + K ++ + M R + + P F E
Sbjct: 359 FIYESMRYQPVVDLVMRKAL-EDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLE 416
Query: 427 RFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEW 486
F ++ R + PFG G R C G +AM+ ++ + L+ F
Sbjct: 417 NFAKN--------------VPYRYFQ--PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHV 460
Query: 487 KAADGYEVDFSEKQEFTTV----MKNPLRARISPRIS 519
K G V+ +K ++ KN L +PR S
Sbjct: 461 KTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRNS 497
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 367 VILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPE 426
I E LR PP + P +++D + G I KD V M+ RDP+ +E P F
Sbjct: 305 AIAETLRYKPPVQLI-PRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIH 363
Query: 427 RFVRDESGGRVAVVEDLDITG--SREIKMMPFGVGRRICPGLGLAMLHLEYFVANLV 481
R EDL I S + + FG G C G A +E VAN+V
Sbjct: 364 R-------------EDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIE-IVANIV 406
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 24/114 (21%)
Query: 365 KAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFK 424
AVI E +R PP V +A +D T+ H +PK ++ ++A RDP + P F
Sbjct: 290 SAVIEETMRYDPPVQLVSRYA-GDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFD 348
Query: 425 PERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVA 478
P+R +I+ + FG G C LG + LE VA
Sbjct: 349 PDRA---------------------QIRHLGFGKGAHFC--LGAPLARLEATVA 379
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 91/464 (19%), Positives = 183/464 (39%), Gaps = 59/464 (12%)
Query: 26 FPKSKPNLPP-GPVAFPVIGNLHWLRKSLTE-IEPVLRDLHSKLGPIVTLRIGSRPIIFI 83
F ++P PP PV P +G++ K+ E ++ RDL S + T+ IG + + +
Sbjct: 10 FNTTRPTDPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSG---VFTISIGGQRVTIV 66
Query: 84 ADHSLAYKALVQNGAVFADRPQALPINKIAS--SNQHNISSAFYGPTWRVLRR-NLTAEI 140
D ++ F+ R + L ++ + + A+ P R+ + N AE
Sbjct: 67 GDPH-------EHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEE 119
Query: 141 MHPSRLRSYSHARKWVLEILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMC-FGDKLD 199
+ ++ +++ A ++ + +F +++ D+ V + AM C FG+ L
Sbjct: 120 LTIAKFQNFVPA----IQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLR 175
Query: 200 HNQIKEIKNIHHSRLLAFSRFRILN---FWPRLTKIVLRKKWAQFLQLLKDQENLLVPLI 256
K + H ++LL+ ++ F P L ++ L + A+ + + + +L +I
Sbjct: 176 ----KRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPLPQS-ARCREARAELQKILGEII 230
Query: 257 RARKKMKEERLMNKGKENVLCYVDTLLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTT 316
AR+K + + N D L L + + + AG T+
Sbjct: 231 VAREKEEASKDNNTS--------DLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTS 282
Query: 317 STTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXD-LNKMPYLKAVILEGLRRH 375
+ T W M +L+ H + K + + +++MP+ + + E +RR
Sbjct: 283 TITTSWSMLHLM---HPKNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRD 339
Query: 376 PPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGG 435
PP V+ V + + +V+PK + D + + +P + PER
Sbjct: 340 PPLLMVM-RMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER-------- 390
Query: 436 RVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVAN 479
D + G+ + FG G C G A+L ++ +A
Sbjct: 391 ------DEKVDGA----FIGFGAGVHKCIGQKFALLQVKTILAT 424
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 17/84 (20%)
Query: 358 LNKMPYLKAVILEGLRRHPPGHFVLPH--AVTEDFTLDGHVIPKDASVNFMVAEM----- 410
+ +MP K+V+ E LR PP V P +FT++ H DA+ EM
Sbjct: 324 IEQMPLTKSVVYESLRIEPP---VPPQYGKAKSNFTIESH----DATFEVKKGEMLFGYQ 376
Query: 411 ---GRDPKVWEDPMAFKPERFVRD 431
+DPKV++ P + P+RFV D
Sbjct: 377 PFATKDPKVFDRPEEYVPDRFVGD 400
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 69/183 (37%), Gaps = 50/183 (27%)
Query: 304 LCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPY 363
L + L AG +TT+ L M + ++P K+ + P
Sbjct: 236 LVATVLVAGYETTNHQLALAMYDFAQHPDQWMKI---------------------KENPE 274
Query: 364 LKAVILEGLRRHPPGHFVLPHAVT----EDFTLDGHVIPKDASVNFMVAEMG-RDPKVWE 418
L +E + R P LP T EDF ++G IP V FM A + RDP+V+
Sbjct: 275 LAPQAVEEVLRWSP---TLPVTATRVAAEDFEVNGVRIPTGTPV-FMCAHVAHRDPRVFA 330
Query: 419 DPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVA 478
D +RF DIT RE + FG G C G LA L L VA
Sbjct: 331 DA-----DRF---------------DITVKREAPSIAFGGGPHFCLGTALARLELTEAVA 370
Query: 479 NLV 481
L
Sbjct: 371 ALA 373
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 69/183 (37%), Gaps = 50/183 (27%)
Query: 304 LCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPY 363
L + L AG +TT+ L M + ++P K+ + P
Sbjct: 246 LVATVLVAGYETTNHQLALAMYDFAQHPDQWMKI---------------------KENPE 284
Query: 364 LKAVILEGLRRHPPGHFVLPHAVT----EDFTLDGHVIPKDASVNFMVAEMG-RDPKVWE 418
L +E + R P LP T EDF ++G IP V FM A + RDP+V+
Sbjct: 285 LAPQAVEEVLRWSP---TLPVTATRVAAEDFEVNGVRIPTGTPV-FMCAHVAHRDPRVFA 340
Query: 419 DPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVA 478
D +RF DIT RE + FG G C G LA L L VA
Sbjct: 341 DA-----DRF---------------DITVKREAPSIAFGGGPHFCLGTALARLELTEAVA 380
Query: 479 NLV 481
L
Sbjct: 381 ALA 383
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 181/461 (39%), Gaps = 59/461 (12%)
Query: 29 SKPNLPP-GPVAFPVIGNLHWLRKSLTE-IEPVLRDLHSKLGPIVTLRIGSRPIIFIADH 86
K LPP PV P +G++ K+ E ++ RDL S + T+ IG + + + D
Sbjct: 4 GKGKLPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSG---VFTISIGGQRVTIVGDP 60
Query: 87 SLAYKALVQNGAVFADRPQALPINKIAS--SNQHNISSAFYGPTWRVLRR-NLTAEIMHP 143
++ F+ R + L ++ + + A+ P R+ + N AE +
Sbjct: 61 H-------EHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTI 113
Query: 144 SRLRSYSHARKWVLEILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMC-FGDKLDHNQ 202
++ +++ A ++ + +F +++ D+ V + AM C FG+ L
Sbjct: 114 AKFQNFVPA----IQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLR--- 166
Query: 203 IKEIKNIHHSRLLAFSRFRILN---FWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRAR 259
K + H ++LL+ ++ F P L ++ L + A+ + + + +L +I AR
Sbjct: 167 -KRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPLPQS-ARCREARAELQKILGEIIVAR 224
Query: 260 KKMKEERLMNKGKENVLCYVDTLLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTTSTT 319
+K + + N D L L + + + AG T++ T
Sbjct: 225 EKEEASKDNNTS--------DLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTIT 276
Query: 320 LQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXD-LNKMPYLKAVILEGLRRHPPG 378
W M +L+ H + K + + +++MP+ + + E +RR PP
Sbjct: 277 TSWSMLHLM---HPKNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPL 333
Query: 379 HFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVA 438
V+ V + + +V+PK + D + + +P + PER
Sbjct: 334 LMVM-RMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER----------- 381
Query: 439 VVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVAN 479
D + G+ + FG G C G A+L ++ +A
Sbjct: 382 ---DEKVDGA----FIGFGAGVHKCIGQKFALLQVKTILAT 415
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 19/110 (17%)
Query: 365 KAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFK 424
+ + ++ +RR+ P L V +DF + K SV + DP++W+ P F+
Sbjct: 276 REMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFR 335
Query: 425 PERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGR----RICPGLGLAM 470
PERF E E+L M+P G G CPG G+ +
Sbjct: 336 PERFAERE--------ENL-------FDMIPQGGGHAEKGHRCPGEGITI 370
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 67/202 (33%), Gaps = 42/202 (20%)
Query: 301 IVALCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNK 360
IV C L AG +TT+ L + L + V ++L T
Sbjct: 244 IVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRT--------------------- 282
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
P +E L R+ P + ED L H IP+ + V ++ RDP + DP
Sbjct: 283 TPESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDP 342
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
R + G FG+G C G LA E + L
Sbjct: 343 DVLDVHRAAERQVG---------------------FGLGIHYCLGATLARAEAEIGLRAL 381
Query: 481 VWCFEWKAADGYEVDFSEKQEF 502
+ +EV++++ F
Sbjct: 382 LDGIPALGRGAHEVEYADDMVF 403
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 88/455 (19%), Positives = 178/455 (39%), Gaps = 58/455 (12%)
Query: 34 PPGPVAFPVIGNLHWLRKSLTE-IEPVLRDLHSKLGPIVTLRIGSRPIIFIADHSLAYKA 92
P PV P +G++ K+ E ++ RDL S + T+ IG + + + D
Sbjct: 4 PVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSG---VFTISIGGQRVTIVGDPH----- 55
Query: 93 LVQNGAVFADRPQALPINKIAS--SNQHNISSAFYGPTWRVLRR-NLTAEIMHPSRLRSY 149
++ F+ R + L ++ + + A+ P R+ + N AE + ++ +++
Sbjct: 56 --EHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNF 113
Query: 150 SHARKWVLEILLDRFKSQSKTGDDPVSVVDHFQYAMFCLLVLMC-FGDKLDHNQIKEIKN 208
A ++ + +F +++ D+ V + AM C FG+ L K +
Sbjct: 114 VPA----IQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLR----KRLNA 165
Query: 209 IHHSRLLAFSRFRILN---FWPRLTKIVLRKKWAQFLQLLKDQENLLVPLIRARKKMKEE 265
H ++LL+ ++ F P L ++ L + A+ + + + +L +I AR+K +
Sbjct: 166 RHFAQLLSKMESSLIPAAVFMPWLLRLPLPQS-ARCREARAELQKILGEIIVAREKEEAS 224
Query: 266 RLMNKGKENVLCYVDTLLDLQLPXXXXXXXXXXXXIVALCSEFLNAGTDTTSTTLQWIMA 325
+ N D L L + + + AG T++ T W M
Sbjct: 225 KDNNTS--------DLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSML 276
Query: 326 NLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXD-LNKMPYLKAVILEGLRRHPPGHFVLPH 384
+L+ H + K + + +++MP+ + + E +RR PP V+
Sbjct: 277 HLM---HPKNKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVM-R 332
Query: 385 AVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLD 444
V + + +V+PK + D + + +P + PER D
Sbjct: 333 MVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--------------DEK 378
Query: 445 ITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVAN 479
+ G+ + FG G C G A+L ++ +A
Sbjct: 379 VDGA----FIGFGAGVHKCIGQKFALLQVKTILAT 409
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 363 YLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMA 422
Y + + E R +P G V+ A ++DF +G P+ V + D W DP
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARA-SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 423 FKPERF 428
F+PERF
Sbjct: 332 FRPERF 337
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 311 AGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILE 370
AG T+S T W M +L+ +V K +++MP+ + E
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARE 321
Query: 371 GLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR 430
+RR PP +L V D + +V+PK + D + + +P + PER
Sbjct: 322 SIRRDPP-LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 377
Query: 431 DESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWK 487
D + G+ + FG G C G +L ++ +A ++++
Sbjct: 378 -----------DEKVEGA----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 419
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 311 AGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILE 370
AG T+S T W M +L+ +V K +++MP+ + E
Sbjct: 265 AGQHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARE 322
Query: 371 GLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR 430
+RR PP +L V D + +V+PK + D + + +P + PER
Sbjct: 323 SIRRDPP-LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 378
Query: 431 DESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWK 487
D + G+ + FG G C G +L ++ +A ++++
Sbjct: 379 -----------DEKVEGA----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 420
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 311 AGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILE 370
AG T+S T W M +L+ +V K +++MP+ + E
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARE 321
Query: 371 GLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR 430
+RR PP +L V D + +V+PK + D + + +P + PER
Sbjct: 322 SIRRDPP-LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 377
Query: 431 DESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWK 487
D + G+ + FG G C G +L ++ +A ++++
Sbjct: 378 -----------DEKVEGA----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 419
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 311 AGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILE 370
AG T+S T W M +L+ +V K +++MP+ + E
Sbjct: 263 AGQHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARE 320
Query: 371 GLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR 430
+RR PP +L V D + +V+PK + D + + +P + PER
Sbjct: 321 SIRRDPP-LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 376
Query: 431 DESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWK 487
D + G+ + FG G C G +L ++ +A ++++
Sbjct: 377 -----------DEKVEGA----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 418
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 311 AGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILE 370
AG T+S T W M +L+ +V K +++MP+ + E
Sbjct: 277 AGQHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARE 334
Query: 371 GLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR 430
+RR PP +L V D + +V+PK + D + + +P + PER
Sbjct: 335 SIRRDPP-LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 390
Query: 431 DESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWK 487
D + G+ + FG G C G +L ++ +A ++++
Sbjct: 391 -----------DEKVEGA----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 432
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 311 AGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVILE 370
AG T+S T W M +L+ +V K +++MP+ + E
Sbjct: 277 AGQHTSSITTTWSMLHLMHPANV--KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARE 334
Query: 371 GLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR 430
+RR PP +L V D + +V+PK + D + + +P + PER
Sbjct: 335 SIRRDPP-LLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--- 390
Query: 431 DESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCFEWK 487
D + G+ + FG G C G +L ++ +A ++++
Sbjct: 391 -----------DEKVEGA----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 432
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 358 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVW 417
L + P + ++ +RR P + ++DF +G P+ V + D W
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 418 EDPMAFKPERF 428
DP F+PERF
Sbjct: 319 ADPQEFRPERF 329
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 358 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVW 417
L + P + ++ +RR P + ++DF +G P+ V + D W
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 418 EDPMAFKPERF 428
DP F+PERF
Sbjct: 319 ADPQEFRPERF 329
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 358 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVW 417
L + P + ++ +RR P + ++DF +G P+ V + D W
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 418 EDPMAFKPERF 428
DP F+PERF
Sbjct: 319 ADPQEFRPERF 329
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Query: 358 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEM------- 410
+ KM K+V+ E LR PP A +D ++ H DA+ EM
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGRA-KKDLVIESH----DAAFKVKAGEMLYGYQPL 395
Query: 411 -GRDPKVWEDPMAFKPERFVRDES 433
RDPK+++ F PERFV +E
Sbjct: 396 ATRDPKIFDRADEFVPERFVGEEG 419
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Query: 358 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEM------- 410
+ KM K+V+ E LR PP A +D ++ H DA+ EM
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGRA-KKDLVIESH----DAAFKVKAGEMLYGYQPL 395
Query: 411 -GRDPKVWEDPMAFKPERFVRDES 433
RDPK+++ F PERFV +E
Sbjct: 396 ATRDPKIFDRADEFVPERFVGEEG 419
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 358 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVW 417
L + P + ++ +RR P + ++DF +G P+ V + D W
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 418 EDPMAFKPERF 428
DP F+PERF
Sbjct: 327 ADPQEFRPERF 337
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 366 AVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKP 425
A+I E +R PP TED + G +I + + FM+ RDP+V++DP F
Sbjct: 268 AIINEMVRMDPP-QLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 426 ER 427
R
Sbjct: 327 TR 328
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 358 LNKMPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVW 417
L + P + ++ +RR P + ++DF +G P+ V + D W
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 418 EDPMAFKPERF 428
DP F+PERF
Sbjct: 327 ADPQEFRPERF 337
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 365 KAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFK 424
+A I+ + R P TED + G +I + + FM+ RDP+V++DP F
Sbjct: 264 RAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 323
Query: 425 PER 427
R
Sbjct: 324 HTR 326
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 17/129 (13%)
Query: 358 LNKMPYLKAVILEGLR--------RHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAE 409
L+ P L +V+ E LR R +P A +F L D + F
Sbjct: 313 LDSTPVLDSVLSESLRLTAAPFITREVVVDLAMPMADGREFNLRR----GDRLLLFPFLS 368
Query: 410 MGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSR-EIKMMPFGVGRRICPGLGL 468
RDP+++ DP FK RF+ + + +D G R + MP+G G C G
Sbjct: 369 PQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKD----GKRLKNYNMPWGAGHNHCLGRSY 424
Query: 469 AMLHLEYFV 477
A+ ++ FV
Sbjct: 425 AVNSIKQFV 433
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 17/129 (13%)
Query: 358 LNKMPYLKAVILEGLR--------RHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAE 409
L+ P L +V+ E LR R +P A +F L D + F
Sbjct: 325 LDSTPVLDSVLSESLRLTAAPFITREVVVDLAMPMADGREFNLRR----GDRLLLFPFLS 380
Query: 410 MGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITGSR-EIKMMPFGVGRRICPGLGL 468
RDP+++ DP FK RF+ + + +D G R + MP+G G C G
Sbjct: 381 PQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKD----GKRLKNYNMPWGAGHNHCLGRSY 436
Query: 469 AMLHLEYFV 477
A+ ++ FV
Sbjct: 437 AVNSIKQFV 445
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 20/121 (16%)
Query: 364 LKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAF 423
+ A++ E LR PP + T+ + G IP D VN V RD +DP F
Sbjct: 274 IPAIVEEVLRYRPP-FPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRF 332
Query: 424 KPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWC 483
P R +SGG + FG G C G LA L + ++
Sbjct: 333 DPSR----KSGG---------------AAQLSFGHGVHFCLGAPLARLENRVALEEIIAR 373
Query: 484 F 484
F
Sbjct: 374 F 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 20/121 (16%)
Query: 364 LKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAF 423
+ A++ E LR PP + T+ + G IP D VN V RD +DP F
Sbjct: 294 IPAIVEEVLRYRPP-FPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRF 352
Query: 424 KPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWC 483
P R +SGG + FG G C G LA L + ++
Sbjct: 353 DPSR----KSGG---------------AAQLSFGHGVHFCLGAPLARLENRVALEEIIAR 393
Query: 484 F 484
F
Sbjct: 394 F 394
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 19/107 (17%)
Query: 365 KAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFK 424
AV+ E LR P VL ED + VIP ++ +GRD + P A
Sbjct: 276 SAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERA-HGPTA-- 332
Query: 425 PERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAML 471
+RF D+T + + + FG G +CPG L+ +
Sbjct: 333 -DRF---------------DLTRTSGNRHISFGHGPHVCPGAALSRM 363
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 46/132 (34%), Gaps = 30/132 (22%)
Query: 364 LKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAF 423
+ + E LR P +ED + G I + V ++ RDP ++ +P F
Sbjct: 267 IGTAVEECLRYESPTQMT-ARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF 325
Query: 424 KPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVW- 482
DIT S + FG G +C G LA L + + L+
Sbjct: 326 --------------------DITRSPN-PHLSFGHGHHVCLGSSLARLEAQIAINTLLQR 364
Query: 483 -------CFEWK 487
FEW+
Sbjct: 365 MPSLNLADFEWR 376
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 364 LKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAF 423
+ V+ E LR P VL T D T++G +P V + RDP ++DP F
Sbjct: 287 VDTVVEEVLRWTSPAMHVL-RVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTF 345
Query: 424 KPER 427
P R
Sbjct: 346 LPGR 349
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 14/54 (25%)
Query: 419 DPMAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLH 472
D AF+PERF L+ G+ + PFG+G+R+C G A+L
Sbjct: 306 DGEAFRPERF--------------LEERGTPSGRYFPFGLGQRLCLGRDFALLE 345
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 63/173 (36%), Gaps = 41/173 (23%)
Query: 309 LNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPYLKAVI 368
+NAG +TT++ + L+ P + +L D + MP A +
Sbjct: 247 INAGRETTTSMIALSTLLLLDRPELPAELR-----------------KDPDLMP---AAV 286
Query: 369 LEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERF 428
E LR + ED L G +P D V ++A DP+ ++D PER
Sbjct: 287 DELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDD-----PERV 341
Query: 429 VRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLV 481
D T + + FG G C G LA L LE + L+
Sbjct: 342 -------------DFHRTDNHHVA---FGYGVHQCVGQHLARLELEVALETLL 378
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 21/121 (17%)
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
M L + E LR P E LDG VIP +V ++A+ R P+ + DP
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
F +R ++ G +A FG G C G LA L V L
Sbjct: 353 HRFD----IRRDTAGHLA-----------------FGHGIHFCIGAPLARLEARIAVRAL 391
Query: 481 V 481
+
Sbjct: 392 L 392
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 24/121 (19%)
Query: 366 AVILEGLRRHPPGHFVLPHA-VTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFK 424
+ E LR + P F LPH ED ++ I K V + RD +++P FK
Sbjct: 220 GFVEETLRYYSPIQF-LPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFK 278
Query: 425 PERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWCF 484
G RE+ + FG+G +C G LA L + +++ F
Sbjct: 279 ---------------------IGRREMH-LAFGIGIHMCLGAPLARLEASIALNDILNHF 316
Query: 485 E 485
+
Sbjct: 317 K 317
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 21/121 (17%)
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
M L + E LR P E LDG VIP +V ++A+ R P+ + DP
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
F +R ++ G +A FG G C G LA L V L
Sbjct: 353 HRFD----IRRDTAGHLA-----------------FGHGIHFCIGAPLARLEARIAVRAL 391
Query: 481 V 481
+
Sbjct: 392 L 392
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 21/121 (17%)
Query: 361 MPYLKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDP 420
M L + E LR P E LDG VIP +V ++A+ R P+ + DP
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 421 MAFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
F +R ++ G +A FG G C G LA L V L
Sbjct: 353 HRFD----IRRDTAGHLA-----------------FGHGIHFCIGAPLARLEARIAVRAL 391
Query: 481 V 481
+
Sbjct: 392 L 392
>pdb|3NR6|A Chain A, Crystal Structure Of Xenotropic Murine Leukemia
Virus-Related Virus (Xmrv) Protease
pdb|3NR6|B Chain B, Crystal Structure Of Xenotropic Murine Leukemia
Virus-Related Virus (Xmrv) Protease
pdb|3SLZ|A Chain A, The Crystal Structure Of Xmrv Protease Complexed With Tl-3
pdb|3SLZ|B Chain B, The Crystal Structure Of Xmrv Protease Complexed With Tl-3
pdb|3SM1|A Chain A, The Crystal Structure Of Xmrv Protease Complexed With
Pepstatin A
pdb|3SM1|B Chain B, The Crystal Structure Of Xmrv Protease Complexed With
Pepstatin A
pdb|3SM2|A Chain A, The Crystal Structure Of Xmrv Protease Complexed With
Amprenavir
pdb|3SM2|B Chain B, The Crystal Structure Of Xmrv Protease Complexed With
Amprenavir
pdb|4EXH|A Chain A, The Crystal Structure Of Xmrv Protease Complexed With
Acetyl-Pepstatin
pdb|4EXH|B Chain B, The Crystal Structure Of Xmrv Protease Complexed With
Acetyl-Pepstatin
Length = 132
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 69 PIVTLRIGSRPIIFIADHSLAYKALVQNGAVFADR 103
P +TL++G +P+ F+ D + L QN +D+
Sbjct: 23 PRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDK 57
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 71/205 (34%), Gaps = 47/205 (22%)
Query: 304 LCSEFLNAGTDTTSTTLQWIMANLVKYPHVQEKLYTXXXXXXXXXXXXXXXXXDLNKMPY 363
L L+AG DTT + + L ++P ++L + L + +
Sbjct: 242 LVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDPT---------------LARNAF 286
Query: 364 LKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAF 423
+AV E P F T + L G VI + V + RDP+ W DP +
Sbjct: 287 EEAVRFE----SPVQTFF--RTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLY 340
Query: 424 KPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLVWC 483
R ++ G V FG G +C G +A L E ++ L
Sbjct: 341 DITR----KTSGHVG-----------------FGSGVHMCVGQLVARLEGEVMLSALA-- 377
Query: 484 FEWKAADGYEVDFSEKQEFTTVMKN 508
+ ++D K+ F ++
Sbjct: 378 ---RKVAAIDIDGPVKRRFNNTLRG 399
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 364 LKAVILEGLRRHPPGHFVLPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAF 423
LKAV E LR PP + E + VI + V +A RD +V++DP +F
Sbjct: 241 LKAV-EEALRFSPPVMRTI-RVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSF 298
Query: 424 KPER 427
P+R
Sbjct: 299 IPDR 302
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 14/51 (27%)
Query: 422 AFKPERFVRDESGGRVAVVEDLDITGSREIKMMPFGVGRRICPGLGLAMLH 472
AF+PERF+ + G+ + PFG+G+R+C G A+L
Sbjct: 309 AFQPERFLAER--------------GTPSGRYFPFGLGQRLCLGRDFALLE 345
>pdb|2YG6|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine
Oxidase: P15i-A394c Double Mutant
pdb|2YG6|B Chain B, Structure-Based Redesign Of Cofactor Binding In Putrescine
Oxidase: P15i-A394c Double Mutant
Length = 453
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 382 LPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR-DESGGRVAVV 440
H V EDF LD VI V+ +AE + +D P R V+ +ESG V
Sbjct: 196 FSHLVDEDFILDKRVIGGMQQVSIRMAE-----ALGDDVFLNAPVRTVKWNESGATVLAD 250
Query: 441 EDLDITGSREIKMMPFGVGRRIC 463
D+ + SR I +P + RI
Sbjct: 251 GDIRVEASRVILAVPPNLYSRIS 273
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 21/96 (21%)
Query: 386 VTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDI 445
T D L G I + V + RDP+ W+D P+R+ DI
Sbjct: 305 TTRDVELAGATIGEGEKVLMFLGSANRDPRRWDD-----PDRY---------------DI 344
Query: 446 TGSREIKMMPFGVGRRICPGLGLAMLHLEYFVANLV 481
T + + FG G +C G +A L E +A L
Sbjct: 345 T-RKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALA 379
>pdb|2YG5|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine
Oxidase: A394c Mutant
Length = 453
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 382 LPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR-DESGGRVAVV 440
H V EDF LD VI V+ +AE + +D P R V+ +ESG V
Sbjct: 196 FSHLVDEDFILDKRVIGGMQQVSIRMAE-----ALGDDVFLNAPVRTVKWNESGATVLAD 250
Query: 441 EDLDITGSREIKMMPFGVGRRIC 463
D+ + SR I +P + RI
Sbjct: 251 GDIRVEASRVILAVPPNLYSRIS 273
>pdb|2YG7|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine
Oxidase: A394c-A396t-Q431g Triple Mutant
pdb|2YG7|B Chain B, Structure-Based Redesign Of Cofactor Binding In Putrescine
Oxidase: A394c-A396t-Q431g Triple Mutant
Length = 453
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 382 LPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR-DESGGRVAVV 440
H V EDF LD VI V+ +AE + +D P R V+ +ESG V
Sbjct: 196 FSHLVDEDFILDKRVIGGMQQVSIRMAE-----ALGDDVFLNAPVRTVKWNESGATVLAD 250
Query: 441 EDLDITGSREIKMMPFGVGRRIC 463
D+ + SR I +P + RI
Sbjct: 251 GDIRVEASRVILAVPPNLYSRIS 273
>pdb|2YG3|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine
Oxidase: Wild Type Enzyme
pdb|2YG3|B Chain B, Structure-Based Redesign Of Cofactor Binding In Putrescine
Oxidase: Wild Type Enzyme
pdb|2YG4|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine
Oxidase: Wild Type Bound To Putrescine
pdb|2YG4|B Chain B, Structure-Based Redesign Of Cofactor Binding In Putrescine
Oxidase: Wild Type Bound To Putrescine
Length = 453
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 382 LPHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVR-DESGGRVAVV 440
H V EDF LD VI V+ +AE + +D P R V+ +ESG V
Sbjct: 196 FSHLVDEDFILDKRVIGGMQQVSIRMAE-----ALGDDVFLNAPVRTVKWNESGATVLAD 250
Query: 441 EDLDITGSREIKMMPFGVGRRIC 463
D+ + SR I +P + RI
Sbjct: 251 GDIRVEASRVILAVPPNLYSRIS 273
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 31/93 (33%), Gaps = 21/93 (22%)
Query: 388 EDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVEDLDITG 447
ED + G I +V + M RD K +E+P F R R G
Sbjct: 299 EDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNARHHVG------------- 345
Query: 448 SREIKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
FG G C G LA LE + L
Sbjct: 346 --------FGHGIHQCLGQNLARAELEIALGGL 370
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 36/99 (36%), Gaps = 23/99 (23%)
Query: 383 PHAVTEDFTLDGHVIPKDASVNFMVAEMGRDPKVWEDPMAFKPERFVRDESGGRVAVVED 442
P ED TL G I K SV + RDP + D V+
Sbjct: 288 PRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPD--------------------VDR 327
Query: 443 LDITGSRE-IKMMPFGVGRRICPGLGLAMLHLEYFVANL 480
LD+T RE I + FG G C G LA L L L
Sbjct: 328 LDVT--REPIPHVAFGHGVHHCLGAALARLELRTVFTEL 364
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,534,023
Number of Sequences: 62578
Number of extensions: 566012
Number of successful extensions: 2075
Number of sequences better than 100.0: 143
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 1772
Number of HSP's gapped (non-prelim): 164
length of query: 529
length of database: 14,973,337
effective HSP length: 103
effective length of query: 426
effective length of database: 8,527,803
effective search space: 3632844078
effective search space used: 3632844078
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 54 (25.4 bits)