BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037368
(823 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91W86|VPS11_MOUSE Vacuolar protein sorting-associated protein 11 homolog OS=Mus
musculus GN=Vps11 PE=1 SV=3
Length = 941
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 332/856 (38%), Positives = 469/856 (54%), Gaps = 99/856 (11%)
Query: 3 QWRKFDFFE-----EKYGGKSTIP--EEVSGN-----------ITCCSSGRGKVVIGCDD 44
QWR+F FFE E G P VSG+ IT C SGRG +V G +
Sbjct: 6 QWRRFVFFEKELVKEPLGNDGAAPGAAPVSGSAASKFLCLPPGITVCDSGRGSLVFGDME 65
Query: 45 GAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104
G + L R L+ GFQA+ V L QLKQ N L +VGEDE+ +K+++L+K
Sbjct: 66 GQIWFLPRSLQLT-GFQAYKLRVTHLYQLKQHNILASVGEDEE----GINPLVKIWNLEK 120
Query: 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDI 164
+ +P C I P + S L + E + +AIG +G + KGDI
Sbjct: 121 RD-----GGNPLCTRIFPAIPGTEP--TVVSCLTVHEN--LNFMAIGFTDGSVTLNKGDI 171
Query: 165 ARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGC 224
R+R ++ ++ V GL FR G+ LF VT +V + + + R LD GC
Sbjct: 172 TRDRHSKTQILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGC 231
Query: 225 STNSVAMSDR---LELIIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIAD-- 279
A+SD L+ I+ E VY Y+ D RGPC+AFEG K ++ WFRGYL+ V D
Sbjct: 232 GLRCSALSDPSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIVHWFRGYLVIVSRDRK 291
Query: 280 ------------QRNSKNIFNVYDLKNRLIAHSLVVKEVSHMLCEWGNIILVMTDKSVLC 327
Q + K I N+YDL N+ IA+S +++ +L EWG++ ++ D V
Sbjct: 292 VSPKSEFTSRDSQNSDKQILNIYDLCNKFIAYSAGFEDIVDVLAEWGSLYVLTRDGRVHA 351
Query: 328 IGEKDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQY 387
+ EKD ++KL+MLFKKNL+ +AINL +SQ D+ A++ +YGDHLYSK ++D A+ QY
Sbjct: 352 LQEKDTQTKLEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQY 411
Query: 388 ILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEKLN 447
I TIG LEPSYVI+KFLDAQRI+NLT YL+ LH + A+ DHTTLLLNCYTKLKD KL
Sbjct: 412 IRTIGKLEPSYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLE 471
Query: 448 MFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLEDLGRYDEAL 507
FIK + H FDVETAI+V R A Y+ HA+Y+A+ HE YLKI LED+ Y EAL
Sbjct: 472 EFIKTKSESEVH-FDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEAL 530
Query: 508 QYISSLDPSQAGVTVKEYGKILIEHKPMETIDILLRLCTEDGESTKRGASSSTYMSMLPS 567
+YI L QA +K YGK L+ H P +T +L LCT D + G +S S
Sbjct: 531 RYIGKLPFEQAESNMKRYGKTLMHHIPEQTTQLLKGLCT-DYRPSLEGRGDREALSCRAS 589
Query: 568 PVDFLNIFVHHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSYDLNFPSISQLNDGV 627
+F+ IF ++P L FLE + DSP I++TLLEL L
Sbjct: 590 SEEFIPIFANNPRELKAFLEHMSEVQPDSPQG--IYDTLLELRL---------------- 631
Query: 628 DLRLRSGSGLPKAEYNGEVTADGKDTYKGKDVLERREKGLRLLKTAWPSELEHPLYDVDL 687
+ A KD + K+ L + + LLK+ ++ D
Sbjct: 632 -----------------QNWAHEKDP-QAKEKLH--AEAISLLKSGRFCDV------FDK 665
Query: 688 AIILCEMNAFKEGLLYLYEKLKLYKEVIACYTQAHDHEGLIACCKRLGDSGKGGDPSLWV 747
A++LC+M+ F++G+LYLYE+ KL+++++ + Q + +IA C+R G+ +PSLW
Sbjct: 666 ALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQ----EPSLWE 721
Query: 748 DLLKYFGELGEDCSKEVKEVLTYIERDDILPPIVVLQTLSRNPCLTLSVIKDYIARKLEQ 807
L YF EDC + V VL +IE ++PP++V+QTL+ N TLS+I+DY+ +KL++
Sbjct: 722 QALSYFARKEEDCKEYVAAVLRHIENKSLMPPLLVVQTLAHNSTATLSIIRDYLVQKLQK 781
Query: 808 ESKLIEGDRRAIENYQ 823
+S+ I D + Y+
Sbjct: 782 QSQQIAQDELRVRRYR 797
>sp|Q9H270|VPS11_HUMAN Vacuolar protein sorting-associated protein 11 homolog OS=Homo
sapiens GN=VPS11 PE=1 SV=1
Length = 941
Score = 536 bits (1380), Expect = e-151, Method: Compositional matrix adjust.
Identities = 328/856 (38%), Positives = 470/856 (54%), Gaps = 99/856 (11%)
Query: 3 QWRKFDFFEEKY-------GGKSTIPEEVSGN-----------ITCCSSGRGKVVIGCDD 44
QWR+F FF+++ G + SG+ IT C SGRG +V G +
Sbjct: 6 QWRRFVFFDKELVKEPLSNDGAAPGATPASGSAASKFLCLPPGITVCDSGRGSLVFGDME 65
Query: 45 GAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104
G + L R L+ GFQA+ V L QLKQ N L +VGEDE+ +K+++L+K
Sbjct: 66 GQIWFLPRSLQLT-GFQAYKLRVTHLYQLKQHNILASVGEDEE----GINPLVKIWNLEK 120
Query: 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDI 164
+ +P C I P + S L + E + +AIG +G + KGDI
Sbjct: 121 RD-----GGNPLCTRIFPAIPGTEP--TVVSCLTVHEN--LNFMAIGFTDGSVTLNKGDI 171
Query: 165 ARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGC 224
R+R ++ ++ V GL FR G+ LF VT +V + + + R LD GC
Sbjct: 172 TRDRHSKTQILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGC 231
Query: 225 STNSVAMSDR---LELIIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIAD-- 279
A+SD L+ I+ E VY Y+ D RGPC+AFEG K + WFRGYL+ V D
Sbjct: 232 GLRCSALSDPSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLIIVSRDRK 291
Query: 280 ------------QRNSKNIFNVYDLKNRLIAHSLVVKEVSHMLCEWGNIILVMTDKSVLC 327
Q + K I N+YDL N+ IA+S V ++V +L EWG++ ++ D V
Sbjct: 292 VSPKSEFTSRDSQSSDKQILNIYDLCNKFIAYSTVFEDVVDVLAEWGSLYVLTRDGRVHA 351
Query: 328 IGEKDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQY 387
+ EKD ++KL+MLFKKNL+ +AINL +SQ D+ A++ +YGDHLYSK ++D A+ QY
Sbjct: 352 LQEKDTQTKLEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQY 411
Query: 388 ILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEKLN 447
I TIG LEPSYVI+KFLDAQRI+NLT YL+ LH + A+ DHTTLLLNCYTKLKD KL
Sbjct: 412 IRTIGKLEPSYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLE 471
Query: 448 MFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLEDLGRYDEAL 507
FIK + H FDVETAI+V R A Y+ HA+Y+A+ HE YLKI LED+ Y EAL
Sbjct: 472 EFIKKKSESEVH-FDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEAL 530
Query: 508 QYISSLDPSQAGVTVKEYGKILIEHKPMETIDILLRLCTEDGESTKRGASSSTYMSMLPS 567
+YI L QA +K YGKIL+ H P +T +L LCT D + G S +
Sbjct: 531 RYIGKLPFEQAESNMKRYGKILMHHIPEQTTQLLKGLCT-DYRPSLEGRSDREAPGCRAN 589
Query: 568 PVDFLNIFVHHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSYDLNFPSISQLNDGV 627
+F+ IF ++P L FLE + DSP I++TLLE
Sbjct: 590 SEEFIPIFANNPRELKAFLEHMSEVQPDSPQG--IYDTLLE------------------- 628
Query: 628 DLRLRSGSGLPKAEYNGEVTADGKDTYKGKDVLERREKGLRLLKTAWPSELEHPLYDVDL 687
LRL++ + + ++ A+ + LLK+ ++ D
Sbjct: 629 -LRLQNWAHEKDPQVKEKLHAE----------------AISLLKSGRFCDV------FDK 665
Query: 688 AIILCEMNAFKEGLLYLYEKLKLYKEVIACYTQAHDHEGLIACCKRLGDSGKGGDPSLWV 747
A++LC+M+ F++G+LYLYE+ KL+++++ + Q + +I+ C+R G+ DPSLW
Sbjct: 666 ALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVISVCERHGEQ----DPSLWE 721
Query: 748 DLLKYFGELGEDCSKEVKEVLTYIERDDILPPIVVLQTLSRNPCLTLSVIKDYIARKLEQ 807
L YF EDC + V VL +IE +++PP++V+QTL+ N TLSVI+DY+ +KL++
Sbjct: 722 QALSYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQK 781
Query: 808 ESKLIEGDRRAIENYQ 823
+S+ I D + Y+
Sbjct: 782 QSQQIAQDELRVRRYR 797
>sp|Q54YP4|VPS11_DICDI Vacuolar protein sorting-associated protein 11 homolog
OS=Dictyostelium discoideum GN=vps11 PE=3 SV=1
Length = 952
Score = 524 bits (1350), Expect = e-147, Method: Compositional matrix adjust.
Identities = 330/917 (35%), Positives = 491/917 (53%), Gaps = 169/917 (18%)
Query: 1 MYQWRKFDFFE-------EKYGGKSTIPEEVSGNITCCSSGRGKVVIGCDDGAVSLLDRG 53
M W++F FF+ EK G S +++S ITC +SGRG ++IG +G ++ +DR
Sbjct: 1 MNNWKRFTFFDIETVKQVEKEDGSSL--QKLS--ITCTTSGRGSLIIGDAEGFINFVDRE 56
Query: 54 LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSST 113
+ FQA+ SV + QLK+RNFL +VG D+ A LK+++LDK + +
Sbjct: 57 FGIS-SFQAYQQSVSLIYQLKERNFLSSVGHDDI----GGAAILKIWNLDKTDK----NE 107
Query: 114 SPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFK 173
P C+ +++ S +T F +LE+ I+ +GL NG I I+ DI R+++ + K
Sbjct: 108 QPICVRSIKLEKS----VTVTCFTLLEDLSQII---VGLANGEIIIIRADIFRDKVIKQK 160
Query: 174 L-QVDNQCSVMGLGF------RVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCST 226
+ +V N + GLGF + LF VT VI + ++ + +D+ G
Sbjct: 161 IIKVPNDSPITGLGFFPTKSQQSASAGAVLFVVTTTHVITYHTAHKD-QETIIDDEGGDI 219
Query: 227 NSVAMSDRLELIIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIADQRNSK-- 284
S MSD II R +A+YFY VDGRGPC+ F G K + WFR YL+ + D N+
Sbjct: 220 GSFLMSDDGSPIIARSDAIYFYNVDGRGPCFGFTGVKTKVLWFRSYLVVIGYDTNNTNAL 279
Query: 285 ----------------------------------NIFNVYDLKNRLIAHSLVVKEVSHML 310
N+ N+YDLKN+ I + VSH+
Sbjct: 280 FPGAVVGGQNSIGGLGSQTGSIGSPSVMVQNTKNNVLNIYDLKNKYIGFTEKFDTVSHIC 339
Query: 311 CEWGNIILVMTDKSVLCIGEKDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRKY 370
EWG+I + D V + EKD ++KL+ LFKK+ Y VAI+L +SQ D +A A+V R+Y
Sbjct: 340 SEWGSIFIFGADGKVFQLEEKDTQTKLETLFKKHSYQVAIDLAKSQHYDNSAIADVYREY 399
Query: 371 GDHLYSKQDYDEAMSQYILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHT 430
GD LY+K DYD A++QY+ TIG LEPSYVI+KFLDAQRI+NLT+Y++ LHEK A+ +HT
Sbjct: 400 GDRLYAKGDYDGAITQYLCTIGQLEPSYVIRKFLDAQRIHNLTSYIQALHEKNLATANHT 459
Query: 431 TLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHE 490
TLLLNCYTKLKDV+KL+ FI ++G FDVETAI+VCR Y + A+++A K +H+
Sbjct: 460 TLLLNCYTKLKDVKKLDHFIMTDNGT----FDVETAIKVCRQGGYFDRALFLASKHSRHD 515
Query: 491 LYLKILLEDLGRYDEALQYISSLDPSQAGVTVKEYGKILI----------------EHKP 534
YLKILLEDL Y +AL YI +LD +A +K+YGK L+ ++P
Sbjct: 516 WYLKILLEDLNEYRKALDYIQTLDWEEADKNLKKYGKQLVSEIPEETTGVLMKLCTNYQP 575
Query: 535 METIDILLRL-----------------------------CTEDGESTKRGASSSTYMSML 565
++ D L L + ++ +++
Sbjct: 576 VQAFDSLTALNLNGLTISNQTTTTTTVTNVTNNNNQNNNSNNNNQNNNNNNNNNIGFKQK 635
Query: 566 PSPVDFLNIFVHHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSYDLNFPSISQLND 625
+P +F++IFV + L+ FLE + + + I+NTLLELYL D+N Q +D
Sbjct: 636 SAPEEFIHIFVSQADWLVKFLEYMVQQGNNESSL--IYNTLLELYLRDDVN-----QTDD 688
Query: 626 GVDLRLRSGSGLPKAEYNGEVTADGKDTYKGKDVLERREKGLRLLKTAWPSELEHPLYDV 685
+ ++R+ K L +D
Sbjct: 689 --------------------------------ERIKRKAKAYEFLTNP------KSKFDQ 710
Query: 686 DLAIILCEMNAFKEGLLYLYEKLKLYKEVIACYTQAHDHEGLIACCKRLGDSGKGGDPSL 745
D A+IL +++ +KEG+LYLYEKL+L+ E+I + + +D++GLI CKR G DP+L
Sbjct: 711 DHALILVQVHNWKEGVLYLYEKLELFNEIIEYHMENNDYDGLIKACKRYGVK----DPNL 766
Query: 746 WVDLLKYFGELGEDCSKEVKEVLTYIERDDILPPIVVLQTLSRNPCLTLSVIKDYIARKL 805
WV L +F +DC E+ EVLT I++++++PP++V+Q LS+N TL+VIKDYI+R+L
Sbjct: 767 WVRALSFFSTNKQDCQDEIIEVLTNIDKENLIPPLLVIQILSQNKNTTLAVIKDYISRRL 826
Query: 806 EQESKLIEGDRRAIENY 822
QE++ I+ D I Y
Sbjct: 827 SQETQQIDKDYTQIRQY 843
>sp|Q09600|VPS11_CAEEL Vacuolar protein sorting-associated protein 11 homolog
OS=Caenorhabditis elegans GN=vps-11 PE=3 SV=2
Length = 980
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 146/591 (24%), Positives = 266/591 (45%), Gaps = 61/591 (10%)
Query: 2 YQWRKFDFFEEKYGGKSTIPEEV-----SGNITC-CSSGRGKVVIGCDDGAVSLLDRGLK 55
+ WR+F+FF+ P++ + C CSSG G V +G G V L
Sbjct: 4 FGWRRFNFFDRSVVFDKDDPKQKFMGLKDVAVDCWCSSG-GSVYLGEAKGGVFQLTNQFS 62
Query: 56 FNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSP 115
+ ++A+ S+ L + +L ++GED++ LK++D PE +P
Sbjct: 63 -EYYWKAYQKSLASLHSADK--YLFSIGEDDETVN----TLLKIWD-----PERVEKNTP 110
Query: 116 DCIGILRVF----TSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARE---- 167
+ +R+ TS P I L+ + +G +G + +GD+ +
Sbjct: 111 HVMRTIRMSPLNPTSSSPACSIAVHSSLQS------VVVGYTDGTVLFYQGDVLHDKSLN 164
Query: 168 -RITRFKLQVDNQCSVMGLGFRV-DGQALQLFAVTPNSVILFSLQNQPP--KRQFLDNIG 223
R + + + SV GL V +F +T V + L+N + D G
Sbjct: 165 SRWIKVRDSSVGEGSVTGLAIAVLPASKTVVFVITQKHVHSYVLENGRTVIAHKKHDANG 224
Query: 224 CSTNSVAMSDRL-ELIIGRPEAVYFYEVDG--------RGPCWAF-EGEKKLLGWFRGYL 273
+ + + +LI+ E ++FY+ D G C G +KL G
Sbjct: 225 ATADCWTFDESTGQLIVASREMLFFYDADQCIDMDGGEVGRCLQLGRGHEKLQLVASGQY 284
Query: 274 LCV-------IADQRNSK--NIFNVYDLKNRLIAHSLVVKEVSHMLCEWGNIILVMTDKS 324
L + I +R+S+ + +VYD+K + + S + + + G+ +LV++
Sbjct: 285 LALLTKHHSLIQKERDSEFMTMLSVYDIKGQYVGFSCSLPNLCRLFIA-GSTMLVLSHDG 343
Query: 325 VLC-IGEKDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEA 383
+L + EK++ +KLD+L KK+++ VA+ + ++ + + KYG++LY K DY+ A
Sbjct: 344 LLSELIEKNLATKLDILVKKSMFDVAVLIAKNSRDGGDYLKGIHAKYGNYLYGKGDYENA 403
Query: 384 MSQYILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDV 443
+ QY TIG LEPSYV++++LD+ +I L YLE LH+ ++ T +L+N Y K +
Sbjct: 404 IQQYKETIGMLEPSYVMKRYLDSSKIKELCIYLECLHDAKRDNEHQTKILMNAYAKQGEK 463
Query: 444 EKLNMFI-KGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLEDLGR 502
+KL F+ K DG + + + NY A +A K HE L +++ + +
Sbjct: 464 KKLMEFVNKITDGTRVSR--MRDVFEILLKWNYLAEASLLATKFQMHEDALNVIIHHMHK 521
Query: 503 YDEALQYISSLDPSQAGVTVKEYGKILIEHKPMETIDILLRLCTEDGESTK 553
Y + YIS + ++G+ L+ H + + +L E+ ++ K
Sbjct: 522 YTMGVTYISKMPIESVIEMTGKFGRDLLIHARDDLMHMLWEKIQENTDAKK 572
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 667 LRLLK--TAWPSE-LEHPLY------DVDLAIILCEMNAFKEGLLYLYEKLKLYKEVIAC 717
+RL K + W E LE +Y + D A+ + ++ + ++ + KE++
Sbjct: 615 MRLFKVNSDWSQERLEEDIYRFINKKNEDAALQMAQLFDCTPVIEHILMRCHKSKELMMY 674
Query: 718 YTQAHDHEGLIACCKRLGDSGKGGDPSLWVDLLKYFGELGEDCSKEVK-EVLTYIERDDI 776
+ + D E +I C+ K LW+D L + G+ + + ++L IE +
Sbjct: 675 HQKKRDLEAIIRLCQSCSKEEK---RRLWLDALSFIGKHATARDELIIIDLLKEIEASEQ 731
Query: 777 LPPIVVLQTLSRNPCLTLSVIKDYIARKLEQESKLIEGDRRAIE 820
+ P+VVL+ L++N LT+S ++DYI L ++ +IE DR I+
Sbjct: 732 IHPLVVLELLAKNEHLTISSVRDYIIAWLRKQQIIIEEDRNTIK 775
>sp|Q9P6N4|PEP5_SCHPO Vacuolar membrane protein pep5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=pep5 PE=3 SV=1
Length = 906
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 198/894 (22%), Positives = 361/894 (40%), Gaps = 133/894 (14%)
Query: 3 QWRKFDFFEEKYGGKSTIPEEVSGNITCCSSGRGKVVIGCDDGAVSLLDRGLKFNFGFQA 62
W++ F+ K I E + + SS VV G VS+ + K +
Sbjct: 7 NWKRITLFQVK-----AIEENIDRLTSSFSSNGELVVFATAFGDVSIYNSSFKSLQSIKV 61
Query: 63 H-SSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGI- 120
SS+ + L + FL+ + + + D+ EP P + +
Sbjct: 62 EDESSIQQILWLDNKTFLLFSNVEGGTGTNSTVIIYAFSQADENEP-------PQFVLVT 114
Query: 121 ---LRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD 177
+ S +P + + ++P IA G G + C G+ RER + +
Sbjct: 115 THKFSINESPYP------IIAVSQSPIDKTIACGFGGGLVSCYHGNPLRERGIKNSYSHN 168
Query: 178 NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLEL 237
+ GL + +D Q+ LF T N +SL + LDN G S N + L
Sbjct: 169 LGEPITGLTY-LDDQSSVLFIATTNKT--YSLSGK--SLSCLDNTGVSLNCSSSCKTTPL 223
Query: 238 ----------IIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYL-LC----------- 275
+ R + FY+ C+ F GEK + L LC
Sbjct: 224 QSREKNSSSFVCTRSSGLTFYDSKREKICFTFPGEKHYMTVMGSILALCYTPTLGTDSST 283
Query: 276 ------------VIADQRNSKNI-----FNVYDLKNRLIAHSLVVKEVSHMLCEWGNIIL 318
I S+N + DL LI +K+V+ + + L
Sbjct: 284 NEGLKKSFSSSSSIRKADASRNPAFPPRLLLVDLSRNLIVWEGHLKDVAVSILPLKHGFL 343
Query: 319 VMT-DKSVLCIGEKDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSK 377
V+T D +V + ++ ++ +L +K +Y +AI+L + + D ++R Y L+ +
Sbjct: 344 VVTADDNVFELKRITLQEEISLLCQKMMYNLAISLAKKENMDIEFRESLMRDYASFLFRR 403
Query: 378 QDYDEAMSQYILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCY 437
D+ +M YI +I ++ V +FL AQ I L LE+L + G A+ DH LLL+CY
Sbjct: 404 GDFSASMDWYIRSIKSIDIPSVCLEFLKAQEIKQLIRLLEELIKTGLATSDHRLLLLSCY 463
Query: 438 TKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILL 497
++ D + I +GE FD A ++C +N + A ++A + +E L +L+
Sbjct: 464 VEIHDSPSIRKLI----DIGEIDFD--QAFKICYDSNLLDEAKHLAIRFNNNERVLDVLV 517
Query: 498 EDLGRYDEALQYISSLDPSQAGVTVKEYGKILIEHKPMETIDILLR---------LCTED 548
E +Y EAL++ SL PS + +YG++L++ P +T +I ++ L T +
Sbjct: 518 ES-EQYSEALRFFESLPPSNLLPLLLKYGRVLLDKLPEKTTNIFIQFYSNSHRGDLSTSE 576
Query: 549 GESTKRGASS--STYMSMLP-SPVDFLNIFVHHPESLMDFLEKYTNKVKDSPAQVEIHNT 605
+ + A S TY+S+LP + V ++ P SL + SP+Q E
Sbjct: 577 SKGELKTAKSLRQTYLSLLPYAQVANFSL----PPSLYEI----------SPSQEENQRA 622
Query: 606 LLELYLSYDLNFPSISQ-------LNDGVDLRLRSGSGLPKAEYNGEVTADG-------K 651
L S D+++ + S LN +L LP A N + + +
Sbjct: 623 AL---FSEDVSYTAPSPQTCFHIFLNHNSELISFLEGILPNASPNYKTLINTCLFEAYIR 679
Query: 652 DTYKGKDVLER---REKGLRLLKTAWPSELEHPLYDVDLAIILCEMNAFKEGLLYLYEKL 708
+++ +V ++ +EK LLK + D++ ++ ++ F +G+ ++ K
Sbjct: 680 ESFASSNVEKQEFWQEKSNSLLKKVEKN------VDLNAVFLISQILGFDDGVRFVQGKS 733
Query: 709 KLYKEVIACYTQAHDHEGLIACCKRLGDSGKGGDPSLWVDLLKYFGELG--EDCSKEVKE 766
++ + Q +D E + + G + L++ +L F L + +++ E
Sbjct: 734 GQTLDIFRSFCQQNDIERALKMVRVHGPDQQ----ELYIMMLNCFASLENVDSWYQDINE 789
Query: 767 VLTYIERDDILPPIVVLQTLSRNPCLTLSVIKDYIARKLEQESKLIEGDRRAIE 820
++ I ++ P +L L ++ + L I D + L+ + I AIE
Sbjct: 790 IVNIIVSQRLISPTQLLDILGKSVNIKLEHISDSMQSVLDNYRESISKQNEAIE 843
>sp|P12868|PEP5_YEAST Vacuolar membrane protein PEP5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PEP5 PE=1 SV=2
Length = 1029
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 206/452 (45%), Gaps = 56/452 (12%)
Query: 148 IAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILF 207
I +G NG I I+GDI+R+R ++ ++ ++ ++ A FA T + ++LF
Sbjct: 143 IVVGFINGKIILIRGDISRDRGSQQRIIYEDPSKEPITALFLNNDATACFAATTSRILLF 202
Query: 208 SLQNQPPKRQFLD-------NIGCSTNSVAMSDRLELIIGRPEAVYFYEVDGRGPCWAFE 260
+ + R L ++ C + + A + E I + F+ G+ +AF+
Sbjct: 203 NTTGRNRGRPSLVLNSKNGLDLNCGSFNPATN---EFICCLSNFIEFFSSSGKKHQFAFD 259
Query: 261 G--EKKLLGWFRGYLLCV----------IADQRNSKNIFN---VYDLKNRLIAHSLVVK- 304
K++ + ++L V I+ S I N + D KN++I+ + VV
Sbjct: 260 LSLRKRIFCVDKDHILIVTEETGVPTTSISVNELSPTIINRIFIIDAKNKIISLNFVVSS 319
Query: 305 ---EVSHMLCEWGNIILVMTDKSVLC-IGEKDMESKLDMLFKKNLYTVAINLVQSQQADA 360
++ NI ++T + V+ I K +E++++++ +K LY A+ L +
Sbjct: 320 AIIDIFSTSQSGKNITYLLTSEGVMHRITPKSLENQINIIIQKELYPFALQLAKQHSLSP 379
Query: 361 AATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYVIQKF-----LDAQRIYNLTNY 415
E+ +KYGD+L+ K EA QYI + +E S +I KF D + + NL +Y
Sbjct: 380 LDVQEIHKKYGDYLFKKGLRKEATDQYIQCLDVVETSEIISKFGVKEVPDPESMRNLADY 439
Query: 416 LEKLHEKGFASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVG------------------ 457
L L + + +DH TLLL KLKDVE ++ FI+ D G
Sbjct: 440 LWSLIKNSISQRDHVTLLLIVLIKLKDVEGIDTFIQHFDRKGIWNEGVVMDDMDDVTFFY 499
Query: 458 --EHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYL-KILLEDLGRYDEALQYISSLD 514
FD++ + + + +++ + +AKK K L + ILL L +A++YI SL
Sbjct: 500 SDNDFFDLDLILELMKESDFKRLSYRLAKKYSKDSLIIVDILLNLLHNPVKAIKYIKSLP 559
Query: 515 PSQAGVTVKEYGKILIEHKPMETIDILLRLCT 546
+ + Y K L+E P ET +L+ + T
Sbjct: 560 IDETLRCLVTYSKKLLEESPNETNALLIEVFT 591
>sp|Q8I480|ZNRF2_PLAF7 RING finger protein PFE0100w OS=Plasmodium falciparum (isolate 3D7)
GN=PFE0100w PE=4 SV=1
Length = 1272
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 17/267 (6%)
Query: 326 LCIGEKDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRK-YGDHLYSKQDYDEAM 384
+ + E+++ ++M KK LY I + + K Y D L+ K+ Y+ A+
Sbjct: 546 IILKERNINEIINMFKKKKLYQWLIKYANLNKNYQIININFIHKIYADFLFEKEQYENAI 605
Query: 385 SQYILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVE 444
+YI TI +LE SYVI K+L+ LT YLEKLH + +HT +LL+CY K +
Sbjct: 606 YEYIQTINYLETSYVIHKYLNLDLYEYLTIYLEKLHVYHHFNDEHTMMLLSCYKKQCKKK 665
Query: 445 KLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLEDLGRYD 504
K+ FIK + K ++ + A Y+ + ++KK H Y+ IL+E Y+
Sbjct: 666 KMISFIKK----NKDKINLNKTYKFLLNAGYYNIVLNLSKKYKDHFTYVSILIEKYENYE 721
Query: 505 EALQYISSLDPSQAGVTVKEYGKILIEHKPMETIDILLRLCTEDGESTKRGASSSTYMSM 564
++L+YI LD + + +YG I++ P TI +L ++ K + + ++ +
Sbjct: 722 KSLKYIFKLDVENICILLFKYGYKFIKYYPQLTIYLLKKII------KKYNINLTIFIPL 775
Query: 565 LPSPVDFLNIFVHHPESLMDFLEKYTN 591
+DFL +F+ + FL+K N
Sbjct: 776 FLDNIDFLFMFI------VKFLDKNVN 796
>sp|P87295|PEP5L_SCHPO Pep5-like zinc finger protein C16A10.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC16A10.03c PE=4
SV=2
Length = 847
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 3 QWRKFDFFEEKYGGKSTIPEEVSGN-ITCCSSGRGKVVIGCDDGAVSLLDRGLKFNFGFQ 61
+W KF F+ + I + GN I+C ++ IG DG + +L+ L+ F
Sbjct: 5 EWEKFSLFQWQECPSIKILHDSVGNKISCIGKSTKRIAIGTLDGRIVILNSRLQLIRDFY 64
Query: 62 AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK--------MEP-EGTSS 112
A + +QQ+ ++A QSA+C V D + P + T+S
Sbjct: 65 ACEQGI--VQQI-------------YITADQSALCCVVLDKQNFVYLQFWSLNPSKKTNS 109
Query: 113 TSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRF 172
SP C+ R++ P TS V + I + G NG + ++GD R+ +R
Sbjct: 110 NSPLCLYEHRLYGIPNPPFPATSLYV---SIDIKTVVCGFANGLVIRVEGDFVRDLGSRQ 166
Query: 173 KLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPK 215
+ + + S+ L + +LF T V+++ ++N K
Sbjct: 167 DIILREKDSITNL---ILYSPKKLFVSTTTQVMVYKIKNNTKK 206
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 379 DYDEAMSQYILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYT 438
++ +A YI I + + +I+ +L+ + I LT+YLE L KGFA + L+ Y
Sbjct: 379 NFQDATYYYIEAIPFSDSAEIIKFYLEKKLIKELTSYLEALSAKGFAFSHEISTLIYLYI 438
Query: 439 KLKDVEKLNMFIKG 452
KL+ ++KL ++ G
Sbjct: 439 KLRKLDKLTEYVSG 452
>sp|O74925|PEP3_SCHPO Vacuolar membrane protein pep3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=pep3 PE=3 SV=1
Length = 900
Score = 40.4 bits (93), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 680 HPLYDVDLAIILCEMNAFKEGLLYLYEKLKLYKEVIACYTQAHDHEGLIACCKRLGDSGK 739
HPLYD+DL I LC + + + +KLY + + +A D E L A + +
Sbjct: 675 HPLYDMDLGIRLCLQFNCRRSAVKILVLMKLYSQGVELALEADDCE-LAATIANIPEEDV 733
Query: 740 GGDPSLWVDLLKYFGELGEDCSKE--VKEVLTYIERDDI---------LPPIVVLQTLSR 788
+LW + KY SK+ +KE L ++E ++ LP + L LS
Sbjct: 734 VLKKTLWQTIAKYMF------SKKSGIKETLRFLENSEVLQLPELIRLLPEDIKLDDLSD 787
Query: 789 NPCLTLSVIKDYIARKLEQ 807
N C L D+ +++EQ
Sbjct: 788 NVCDEL----DHCMKRIEQ 802
>sp|Q9K303|BLAB3_FLAME Carbapenem-hydrolyzing beta-lactamase BlaB-3 OS=Flavobacterium
meningosepticum GN=blaB3 PE=3 SV=1
Length = 249
Score = 35.4 bits (80), Expect = 1.8, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 314 GNIILVMTDKSVLCI----GEKDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRK 369
N + ++TDK V+ I GE +S D ++KK+ V IN+ D A E K
Sbjct: 53 ANAVYLVTDKGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIINIATHSHDDRAGGLEYFGK 112
Query: 370 YGDHLYSKQDYDEAMSQ 386
G YS + D +++
Sbjct: 113 IGAKTYSTKMTDSILAK 129
>sp|P10665|KS6AA_XENLA Ribosomal protein S6 kinase 2 alpha OS=Xenopus laevis GN=rps6ka
PE=1 SV=1
Length = 733
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 349 AINLVQSQQADAAATAEVLRKYGDH---LYSKQDYDEAMSQYILTI----GHLEPSYVIQ 401
A+ ++ + D + E+LR+YG H + K Y E S Y++T G L + Q
Sbjct: 443 AVKVIDKTKRDPSEEIEILRRYGQHPNIIALKDVYKEGNSIYVVTELMRGGELLDRILRQ 502
Query: 402 KFLDAQR----IYNLTNYLEKLHEKGFASKD 428
KF + ++ + +E LH +G +D
Sbjct: 503 KFFSEREASSVLFTVCKTVENLHSQGVVHRD 533
>sp|P10666|KS6AB_XENLA Ribosomal protein S6 kinase 2 beta OS=Xenopus laevis PE=2 SV=1
Length = 629
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 349 AINLVQSQQADAAATAEVLRKYGDH---LYSKQDYDEAMSQYILTI----GHLEPSYVIQ 401
A+ ++ + D + E+LR+YG H + K Y+E S Y++T G L + Q
Sbjct: 443 AVKVIDKSKRDPSEEIEILRRYGQHPNIITLKDVYEECNSIYLVTELMRGGELLDRILRQ 502
Query: 402 KFLDAQR----IYNLTNYLEKLHEKGFASKD 428
KF + ++ + +E LH +G +D
Sbjct: 503 KFFSEREACSVLFTVCKTVEYLHSQGVVHRD 533
>sp|A1WY14|LEUC_HALHL 3-isopropylmalate dehydratase large subunit OS=Halorhodospira
halophila (strain DSM 244 / SL1) GN=leuC PE=3 SV=1
Length = 466
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 31/237 (13%)
Query: 13 KYGGKSTIPEEVSGNITCCSSGRGKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQ 72
+YGG++ + G +T C+ + G G V++ D +++ G L+ Q
Sbjct: 203 EYGGEAIRSLSMEGRMTICNM---SIEAGARTGMVAVDDTTIEYVRGRPNAPEGALWDQA 259
Query: 73 LKQRNFLVTVGEDEQVSAQQSAVCLKVFDL--DKMEPEGTSSTSPDCIGILRVFTSQFPE 130
+ LV+ + A +V +L D++EP+ T TSP+ + + + P+
Sbjct: 260 VASWRHLVS---------DEDAAFDRVVELHADEIEPQVTWGTSPEMVASV---NRRVPD 307
Query: 131 AKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERI-----TRFKLQVDNQCSVMGL 185
S V A L +GL+ G DI ++I T +++ + + +
Sbjct: 308 PAEESDAVRARAMGRALEYMGLEPGTPLT---DIPMDKIFIGSCTNARIEDLREAAAVVH 364
Query: 186 GFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLD------NIGCSTNSVAMSDRLE 236
G RV Q V + V+ + + R FLD GCS DRLE
Sbjct: 365 GRRVAENIRQALVVPGSGVVKQQAEGEGLDRVFLDAGFEWREPGCSMCLGMNPDRLE 421
>sp|Q5KU39|VPS41_MOUSE Vacuolar protein sorting-associated protein 41 homolog OS=Mus
musculus GN=Vps41 PE=2 SV=1
Length = 853
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 30/52 (57%)
Query: 463 VETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLEDLGRYDEALQYISSLD 514
+E A+ +C+ N+ E +Y+ + G LK+++E+L D+A+++ D
Sbjct: 639 LEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQD 690
>sp|P49754|VPS41_HUMAN Vacuolar protein sorting-associated protein 41 homolog OS=Homo
sapiens GN=VPS41 PE=1 SV=3
Length = 854
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 30/52 (57%)
Query: 463 VETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLEDLGRYDEALQYISSLD 514
+E A+ +C+ N+ E +Y+ + G LK+++E+L D+A+++ D
Sbjct: 640 LEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQD 691
>sp|P59292|ARGA_SHEON Amino-acid acetyltransferase OS=Shewanella oneidensis (strain MR-1)
GN=argA PE=3 SV=1
Length = 445
Score = 34.3 bits (77), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 150 IGLDNGCIYCIKGDIARERITRFKLQVDNQCSV-MG-LGFRVDGQALQLFA--------- 198
+G+DNG +C+ G + R K Q+DN C V MG + V G++ L A
Sbjct: 142 LGVDNGVDFCLSGKVRRIDAQGLKRQLDNHCIVLMGPIAASVTGESFNLTAEEIATQVAI 201
Query: 199 -VTPNSVILFSLQN 211
+ + +I FS QN
Sbjct: 202 KLKADKMIGFSSQN 215
>sp|O49621|MLO1_ARATH MLO-like protein 1 OS=Arabidopsis thaliana GN=MLO1 PE=1 SV=1
Length = 526
Score = 33.9 bits (76), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 445 KLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAM 480
+++ + K ED + + KFD ETA+R R + H HA
Sbjct: 184 RIHQWKKWEDSIADEKFDPETALRKRRVTHVHNHAF 219
>sp|P09334|LP1_BOMMO Low molecular 30 kDa lipoprotein PBMHP-6 OS=Bombyx mori GN=LP PE=2
SV=1
Length = 256
Score = 33.9 bits (76), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 490 ELYLKILLEDLGRYDEALQYISSLDPSQAGVTVKEYGKILIEHKPMETIDILLRLCTEDG 549
+LY+ +++ G Y+ A+ S + G +KE K LIE+ T+D +L T+DG
Sbjct: 32 QLYMSVVI---GEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDG 88
Query: 550 ESTKRGASSSTYMSMLP-SPVDFLNIFVHHPESLMD 584
+ + + + V +N HH L+D
Sbjct: 89 KEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLID 124
>sp|Q63531|KS6A1_RAT Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus GN=Rps6ka1
PE=1 SV=1
Length = 735
Score = 33.5 bits (75), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 349 AINLVQSQQADAAATAEVLRKYGDH---LYSKQDYDEAMSQYILTI----GHLEPSYVIQ 401
A+ ++ + D + E+L +YG H + K YD++ Y++T G L + Q
Sbjct: 445 AVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDSKHVYLVTELMRGGELLDKILRQ 504
Query: 402 KFLDAQR----IYNLTNYLEKLHEKGFASKD 428
KF + +Y ++ +E LH +G +D
Sbjct: 505 KFFSEREASFVLYTISKTVEYLHSQGVVHRD 535
>sp|Q6PFQ0|KS6A6_DANRE Ribosomal protein S6 kinase alpha-6 OS=Danio rerio GN=rps6ka6 PE=2
SV=1
Length = 740
Score = 33.1 bits (74), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 349 AINLVQSQQADAAATAEVLRKYGDH---LYSKQDYDEAMSQYILTI----GHLEPSYVIQ 401
A+ ++ + D + E+L +YG H + K YDE Y++T G L + Q
Sbjct: 447 AVKIIDKSKRDPSEEIEILMRYGQHPNIITLKDVYDEGRFVYLVTELMKGGELLDKILRQ 506
Query: 402 KFLDAQR----IYNLTNYLEKLHEKGFASKD 428
KF + +Y +T ++ LH +G +D
Sbjct: 507 KFFSEREASAVLYTITKTVDYLHCQGVVHRD 537
>sp|Q10161|CLH_SCHPO Probable clathrin heavy chain OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=chc1 PE=1 SV=1
Length = 1666
Score = 33.1 bits (74), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 356 QQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEP-SYVIQKFLDAQRIYNLTN 414
+++D+ +EVL+ D Y + D+ ++ + E S V++ ++ L
Sbjct: 946 KRSDSNLWSEVLQ---DSAYRRPLLDQVIATAVPESSDPEAVSIVVKALMEVDLPSQLIE 1002
Query: 415 YLEK--LHEKGFASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRA 472
LEK L F+ + LL D ++ +I D K+DV+ +
Sbjct: 1003 LLEKIVLQPSSFSENANLQNLLFLTAIKADKSRVMEYIDKLD-----KYDVDEIAEIAIE 1057
Query: 473 ANYHEHAMYVAKKAGKHELYLKILLEDLGRYDEALQYISSLD 514
+E A + K KHE +K+L+ED+ D A Y +++
Sbjct: 1058 NGLYEEAFRIYKIHNKHEQAMKVLVEDIVSLDRAQDYAETVE 1099
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 308,327,652
Number of Sequences: 539616
Number of extensions: 13607512
Number of successful extensions: 32847
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 32781
Number of HSP's gapped (non-prelim): 67
length of query: 823
length of database: 191,569,459
effective HSP length: 126
effective length of query: 697
effective length of database: 123,577,843
effective search space: 86133756571
effective search space used: 86133756571
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)